LOCUS       DBNFCX010000001        68043 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.001, whole genome shotgun sequence.
ACCESSION   DBNFCX010000001 DBNFCX010000000
VERSION     DBNFCX010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 68043)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 68043)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..68043
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.001"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(94..2190)
                     /locus_tag="AC1PJC_000001"
     CDS             complement(94..2190)
                     /locus_tag="AC1PJC_000001"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619058.1"
                     /translation="MTRFYTNRSDFEQNHWLDSQKSRVVAMLRDIDSVSSTVQSEGLS
                     HLYRSRGEASLGASKPSSTFSQAVDRVDSMLRSAGKIHKDIVQNIDSKFTKGLDKSFQ
                     SLNEVNGSKNPYMSKGKYEKTYTTTNYTSNYGYVTQTHTRQVHYSLSDILDGTNSPIP
                     AAQSLYQDRVKNLREQLRQTDQLTDKQIKELESKSDAELVQEFYPTLESDYSQIKNST
                     WQEENKEVLGWVDTGLKFLAIAALSAGTLMTGGAALPLALAGGAYLFADGAHSAITGN
                     TLITGTQLSTEDRIWAGAEAVVTLATFGSFAAGQSALRAGKQIPTTVQTIGKLAKYAD
                     EGVEALQWGSGVLQGDAANATLDYIGGKAFEGIVEGSVKGLQSQLSHIEVSSPSQIQL
                     NARQGQDFVDLQTVEFGKIASKVENNITIKMTVDGVEQKIRVDAIGFDEAGNIRIQEY
                     TTAQSGLKSSRQNILEDLSKYGGTIVGAGKGDFVGGVEIPKGTRIDVVSQKTGNVTVK
                     DGTSVQNTGNFNPLDQEIVTFTNLEFSPTAKAQSWQGDGLYPGIDNYVDVRLNKGDKI
                     YILESDFEVANKMQSGYATTWEAVERSGYDSRKLSESLQIKPYYSEDSSLDIAEYRQQ
                     VTEYTVISDDLYAAFGEKTLANPHFGKGGAPQYFVKDIQEQILAGKLSRGESMPLNNF
                     EISVEEYDRMVNQVKK"
     gene            complement(2187..2621)
                     /locus_tag="AC1PJC_000002"
     CDS             complement(2187..2621)
                     /locus_tag="AC1PJC_000002"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619059.1"
                     /translation="MSEQIQISLSSQEQIILHALRITELATEITQTIQQVVETIPSFS
                     SQGSFHTIYTTGKNDGFYRYVLKAQELKTLSEVLYRHVETTHQKMVDMDRALAVHITN
                     QFLNSPSTSSDDKRFIREHPEEAVRYIQSEMKKSTPSSGGGS"
     gene            complement(2624..3280)
                     /locus_tag="AC1PJC_000003"
     CDS             complement(2624..3280)
                     /locus_tag="AC1PJC_000003"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619060.1"
                     /translation="MIFSIEALYTLHLLNDHSDDLSFLPLPNGQNLDRKSLLKETLEK
                     GFEDLKELQLVVDNQLTERGVEYGYYLEEYHSSPYHCRVDLSYFCAPAVDEFKRYSIL
                     IKEVDEGLFVIERLASVWFLGLLLETHPILHHLDDKMKDYLMYDWTPKSHFSLLVEHG
                     RSEGLRLAVEQLGTIYSDTLFLEIEESVYEYDLTRELMRSIDSETLQSRLIKDLKVEV
                     "
     gene            complement(3277..3609)
                     /locus_tag="AC1PJC_000004"
     CDS             complement(3277..3609)
                     /locus_tag="AC1PJC_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016184335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619061.1"
                     /translation="MDTNINSIDSQYTYDTIVYDDGQIDGVIQQLNQIIDCLNQISSE
                     IVGLEAQDSSWSGKSKAAYVDLKEFLKSYRKDYQHSIKELKSTVSGLETLLNSIPSAT
                     VLKEIDGA"
     gene            complement(3618..3923)
                     /locus_tag="AC1PJC_000005"
     CDS             complement(3618..3923)
                     /locus_tag="AC1PJC_000005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619062.1"
                     /translation="MSHNLHTQRSLSGLQSYIEHCQKVIDRIDSQGGYGYLANFRDKL
                     ADDIKVLKDYRNFVKDSNASFVDLYQTLNAKIGNLNASIANYKSMYNDGKPVWEWVW"
     gene            complement(3997..4452)
                     /locus_tag="AC1PJC_000006"
     CDS             complement(3997..4452)
                     /locus_tag="AC1PJC_000006"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619063.1"
                     /translation="MQKEKMTVEEFLQLKKDAQVSLILFIVFGLVLFSSMFYITAIGA
                     RTQMYNSLVTMVFLSVLMSAVRPYVFSKNILEKKQPELKQYSTEGYSVSNAFLKRAFL
                     VYSIAIIVAIFGFASAYATRVETILPDDTLPSLEQKSIIEQKLEGNSNE"
     gene            complement(4463..8884)
                     /gene="essC"
                     /locus_tag="AC1PJC_000007"
     CDS             complement(4463..8884)
                     /gene="essC"
                     /locus_tag="AC1PJC_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EssC"
                     /protein_id="HIP6619064.1"
                     /translation="MAETVVFYKDGFRYVADVSAGKKILFQGTEKAQVFVSSLDAPLT
                     IWLDGVQVCYDYDGVEGNLVSGMSLAGGVVYLLPSEQVILDPLDKQELTIGQHAGNSF
                     VLAGSSCHVLLKRSDQSWMLYRLAGSIYINNLLMEKWEMELALGDELAFEDTFFKFYA
                     DEVLVAGPVEASDELARKSASRYAFYEDYPDYHRSPRIIYRSSEDRVAINAPSNAPSK
                     PSDSLLKLILPPLMMVGITLVIMIFQPRGLYVLATIAMSIVTLGMSIAGYIKGRKDYQ
                     KELRDREGLYHDYLADKAKELAGLTKSQKDGQLYHYPAIETLVDLADSYHHRIYEKTP
                     LHFDFLYYRLGLGEVPVSYDLSYAQTERSGKRDPLELEGFQLYEQNKTISDMPIVANL
                     SHGPVGYIGPRALVIEQLQLMVNQIALFHSYHDVQFITIMPEEEKEQWDWMRFLPHAT
                     LQDMNVRGFVYNQRTHDQVLNSLNQILKLRRAQKEDKSNRESTLFSPHYVVLVTDEKL
                     ILDHVIMEFFTEDPTELGCSLVFVQDVLSSLSENIKTIINIKDRNTGQLVMEEGQLRE
                     IDFALDHFPVGYDKETLVRRLAPLNHLQNLKSSIPETVTFMEMYGAETFEDLGVVSRW
                     EKHAPYKSLAVPLGLRGKEDIVYLNLHEKAHGPHGLVAGTTGSGKSEVIQSYILSLAV
                     NFHPHDVAFLLIDYKGGGMANLFKDLPHLLGTITNLDGAQSMRALVSINAELKRRQRL
                     FAENDVNHINQYQKKYKLGEVSEPMPHLFLISDEFAELKTNQPDFMKELVSTARIGRS
                     LGIHLILATQKPSGVVDDQIWSNSRFKLALKVADRSDSMEMLKTPDAAEITQVGRGYL
                     QVGNNEVYELFQSAWSGADYQPDKDEQGIEDHTIYAINDIGQYEILNEDLSGLDQAES
                     IKEVPSELQAIVSKLKALTERLSIQALPQPWLPPLSKEIFLQDLRPQGFKDLWGQASG
                     LVARLGMVDIPSRQSQEVLEHDFEKDGHIALFSSPGMGKSTFVQTVLVDLFRQNNPDR
                     LHTYLLDFGTNGLLALNDYPHVAEYFLVEETEKLQKLIKRLQDEIRERRKLFTDSSVH
                     NIEMYRKLGDRKLADIVIAVDSYDGLKGSEVEVVIDTLLQTLARDGMGLGIYLILTAS
                     RTGALKNNLYSNFKRRIALKMNDDSEARAIVGRTALVIEDVPGRGLIQVDDPELIQLA
                     MPAKGENGLEIIEALRHESQEMAKNWDGALPQGIVIVPEVLDEQTFLQMVETEKAIAS
                     DFIPIGLEFEEVHTISLPIPKLKHLLILTEKEQHKLVAVRHLLNMLWHVRKGQSVTLF
                     DVTDEYGRFAGKVGQYYSSSELTENVVEELKMRVLHARKQKEQLNEFVIISDLPAFMT
                     VDGMTDNDFALLYEEGQRVGLHLIVVANKTYMSLSSGIQRLIKQKLDTVLIAMKMSNQ
                     SVVARSEVGREAELAIDEVYLHYQDQQIKLKITKEIE"
     gene            complement(8888..10150)
                     /gene="essB"
                     /locus_tag="AC1PJC_000008"
     CDS             complement(8888..10150)
                     /gene="essB"
                     /locus_tag="AC1PJC_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EssB"
                     /protein_id="HIP6619065.1"
                     /translation="MKEETFVFGGQEFVFLKGDKEWHLDVKRSDVATQELSDLLLLDL
                     HHPQFLQQEMTVDEDTVHFTYHLDAFGQTFEDMKEKEVSEKLRLSLNVLELKQALKLP
                     ITFFVHPSSVFITKDGRAKIAYRAIPEKMVPQTLDAADLLKQLKSYILALFTEHDFMD
                     LYNGALDVVPVPEFLDTIRKAEDMDSLEGLLQGYFQDKLEEEKATLTRVSRSKHRLYR
                     YATIWLSALAGLLVLPLIYLVFMHNPFKEKMLDADTAFIKVDYPGVISELERVEVSSL
                     PYTQKYTLAYAYIQGFDLSNEQRSVILNNVTLKSDEQYLDYWIEIGRGNSQEALDLAK
                     RLDDSDLILYALYQQMEQVRENTTLSGEERETTLDELKAEYQKYWDTRTTILNEDGSQ
                     VETGTSSTSSSTSSTESSSTSPSSSGGE"
     gene            complement(10152..10391)
                     /locus_tag="AC1PJC_000009"
     CDS             complement(10152..10391)
                     /locus_tag="AC1PJC_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002901862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EsaB/YukD family protein"
                     /protein_id="HIP6619066.1"
                     /translation="METHINVTLHDGGRIRDLRIPTHIEVRRLIKELDGIFEKENARK
                     KYQLHVVNKGFILDEGKVLADYPVTTGDIVEVLEV"
     gene            complement(10421..10885)
                     /gene="essA"
                     /locus_tag="AC1PJC_000010"
     CDS             complement(10421..10885)
                     /gene="essA"
                     /locus_tag="AC1PJC_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EssA"
                     /protein_id="HIP6619067.1"
                     /translation="MKKIALVLSCLVLFLPVGIEASELGDNSLQIDSSRIEVEKEKKI
                     GSQDLLVQSLFLAPDQAELTAKKEADQVLLQHQLNSLFQTGEKPSTDILQVGTLFDTR
                     THKVMTTKVDSGTEGAPAGLLSGLFFASIVVGILLLASLATYLMGKDEVGLE"
     gene            complement(10886..14035)
                     /gene="esaA"
                     /locus_tag="AC1PJC_000011"
     CDS             complement(10886..14035)
                     /gene="esaA"
                     /locus_tag="AC1PJC_000011"
                     /inference="COORDINATES: protein motif:HMM:TIGR03929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EsaA"
                     /protein_id="HIP6619068.1"
                     /translation="MDKQRILKYGRNALLVLLLLLSIIGLNIAVQNNTSISKKEQEAG
                     QQNIKLDVALVNEDNTVTLNGTEYNLGASYAKNIEKNTAHNWSTVSRGTADKGLKEGL
                     YQLVVTIPSDFSTKILDINNTNVDKATITYKINANGNLQVENEAVKVAKGIIADLQSQ
                     LIDMYMASILGNLYQAQRNVQTLSDTKVTNIAVFRNNLYQTAVDFKTLFPNLTSTADS
                     TLAANNLLKEALSGNVTAYDSLNTAQTGLKDNLATLIEQRNQGKLSQEEFSASLLAMN
                     SSVLSAETDQLFATIKTTQEVLSGQLGAAAIDETGEASGYIGLVEKLDQAIADLQVAI
                     EAESTKLAEHEAAISDFAETHLTTYYGDSLETIHIGAVLGKSTELPISLASYQTSLDQ
                     LILNQLAGLPSLTPADLTTDLNKLDPKATSQIQFDAAFAQAHFGEHFVASNDLKELQD
                     LAKELEPHLQAAADFKIPTPTTRATLSLEIPSGFDLVSWELNGNSYTNPSEVVALQKD
                     NTVTVTLQYEKSQTTTVSTTVVTDSTSTSSTTGSSSSEENTVSTTAPSTGTPVTTTEM
                     AQGSVKVSVNNLEVTTAGFDWENFLKEQEAYRKAEVAYAAKVSEIISKYNQANRLLDQ
                     YYPVNTVTGERSSLTDSFFNQDAKSLLTSLVTSSITANLQSYSEARAQDQALKERLAE
                     LEGRKQELKDQLQYISTTNSDLAQQIANQLAFLEDVKARAQSIADGQEQQTALQGTHD
                     TELAALATELDASLSITGEVKSLSEQNVEEATNVNTVFTTFTNDVQAAQESGENLSSE
                     ATALMERFESELAENGDFVKTFTSVLSNTYDNGVPNEVILDFLSAPLTESSSSVKATV
                     NTYRPFTWILLLEMVALFAAYVFGTHRVIKAVKDKFKVSRLEDTDLVTVTVLSVLSLL
                     VGGLIGVVSSQQLQIDSELIPTWVLMITLFSLLLAQGQYLLIKNAKGLGMGISFFMVI
                     SFIYLSNAIGTTASLTGLPATLKAINPLSVLENSLSGYFDGEAASLTVIATALVLGLG
                     FAALNAFVDVEKFLNKKED"
     gene            complement(14106..14396)
                     /locus_tag="AC1PJC_000012"
     CDS             complement(14106..14396)
                     /locus_tag="AC1PJC_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WXG100 family type VII secretion target"
                     /protein_id="HIP6619069.1"
                     /translation="MSRIKLTPDELRTSAIRYTEGSDNIDAILSSLSNEQSVIRENWE
                     GTAFDSFDAQFEALKPKIVEFSELLRDINAQLNKVADIIEQTDADIAAQING"
     gene            complement(14678..15490)
                     /gene="purR"
                     /locus_tag="AC1PJC_000013"
     CDS             complement(14678..15490)
                     /gene="purR"
                     /locus_tag="AC1PJC_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA];
                     GO_process: GO:0045982 - negative regulation of purine
                     nucleobase metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pur operon repressor"
                     /protein_id="HIP6619070.1"
                     /translation="MKLRRSERMVVISNYLINHPYELTSLNTFAEKYESAKSSISEDI
                     AIIKKAFEESSIGHIETITGASGGVVFTPSISKAESVEIAQALRDQMAESNRILPGGY
                     IYSSDLLSTPHILKNVGRIIADAFKDEKIDAVMTVATKGVPLANAVANVLNVPFVIVR
                     RDLKITEGSTVSVNYVSGSSDRIEKMFLSKRSLKAGSRVLIVDDFLKNGGTINGMISL
                     LSEFDSTLVGVAVFAENQKGDRSVANYKSLLAVTDINVKENRVDVELGNIFE"
     gene            complement(15592..16458)
                     /locus_tag="AC1PJC_000014"
     CDS             complement(15592..16458)
                     /locus_tag="AC1PJC_000014"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside phosphotransferase family
                     protein"
                     /protein_id="HIP6619071.1"
                     /translation="MAVRIVSRQPLTKGWSTDRKYKVQLEDGRFGLLRIAERPAYEAK
                     QLEFQLVENLFGLGLPVAEPLAFWADDLSVYTLYEWMEGQDMNEVASDLPDSVLYELG
                     CQSGQFLRTLHALPIDQSQRDWNSFYQAKIDNKLAVYQAASHSYPNGQAMIDFVQANR
                     HLLEGRPIAYHHGDFHTGNFLLGADGKLKILDFDRYDIGDPWEEFNRLIFTADLSPAF
                     ARGQVDAYFDGAIPEEFWKLMALYVTVNSLGALSWAEQVDSEQIPLMKLQAQKISEWY
                     ECFNHHLPKWYM"
     gene            complement(16458..17399)
                     /locus_tag="AC1PJC_000015"
     CDS             complement(16458..17399)
                     /locus_tag="AC1PJC_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exoribonuclease YhaM family protein"
                     /protein_id="HIP6619072.1"
                     /translation="MKINQMKKDEFFEGFYLIKSAEVRQTRAGKDYLALTFQDDTGEI
                     EGKVWDAQPGKIKDFTAGTVVHMQGRREVYNNTPQVNQLVLRLPKAGEPNDPADFKEK
                     PPVDVKDTKDYLSQMIFRIENATWQRIVRALYSKYDKEFYSYPAAKTNHHAFYSGLSF
                     HTATMVRLADKIGDIYPQLNKSLLFAGIMLHDLAKVIELTGPDNTGYTVRGNLIGHIS
                     LIDEEITKVLMELGIDDSLEEVTVLRHVILSHHGLLEYGSPVRPQIMEAEILHMIDNI
                     DAEMMMMLSALDKVGPGEMTNRIFAMDNRAFYKPNID"
     gene            complement(17389..18627)
                     /locus_tag="AC1PJC_000016"
     CDS             complement(17389..18627)
                     /locus_tag="AC1PJC_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HIP6619073.1"
                     /translation="MDIVLLILLILVLVALVFLYGKWQSLALLLQDQAEDTADNLSDQ
                     LSYQLENATLKQQQTIHQEVERLRTELYQQLTDIRQELNKSHLENRDATDRRLQAIQE
                     SNEKRLEEMRQTVEEKLEKTLQTRLQASFETVSKQLESVNRGLGEMQTVARDVGSLNK
                     VLSGTKTRGIMGELQLGQIIEDILTPSQYERELATVSGSSERVEYAVKLPGRTEGDYI
                     YLPIDSKFPLADYYRLEDAYESGDKDQIDLHRKNLLAAIKRFAKDIQSKYLNPPETTN
                     FGVLFLPTEGLYSEVVRNPIFFDDLRRQENIVVAGPTTLSALLNSLSVGFKTLNIQRS
                     ADDISKVLGNVKLEFGKFSDLLLKAQKQLNQASSNIDKLLTTRTNAIERSLRTIDLYE
                     DDQTKGLLGLSPLDEEDNEN"
     gene            complement(18628..19260)
                     /locus_tag="AC1PJC_000017"
     CDS             complement(18628..19260)
                     /locus_tag="AC1PJC_000017"
                     /EC_number="2.7.6.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004788 - thiamine diphosphokinase
                     activity [Evidence IEA];
                     GO_process: GO:0006772 - thiamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine diphosphokinase"
                     /protein_id="HIP6619074.1"
                     /translation="MLKIAVIAGGSFDCLPEPADLYVGVDAGSLRLLDHSLPLDWAIG
                     DFDSVTPEELGRITDLAERFLQAPAEKDDTDLELALKEIFKAYPQAQVRIYGALGGRM
                     DHMMANLFLPAEPDLAAFTEQIELVDQQNIIRFRPAGQHRLSPIAGMKYISFMPEDGS
                     RLTIRHAKYPLDASNYFFKKCYASNEFIDRDIDIQLDQGYVVLIYSKDRD"
     gene            complement(19253..19912)
                     /gene="rpe"
                     /locus_tag="AC1PJC_000018"
     CDS             complement(19253..19912)
                     /gene="rpe"
                     /locus_tag="AC1PJC_000018"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018371029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HIP6619075.1"
                     /translation="MSHYKIAPSILAADYANFEKELKRLEKTGVEYVHIDVMDGHFVP
                     NISFGADVVAAMRPHSKLVFDCHLMVSNPENHIETFARAGADILTIHAEATVHLHGTL
                     QKIRAAGMKVGVVINPGTPLVTIEPVLNLVDQVLLMTVNPGFGGQAYIPEVAEKIEAL
                     VKLREAKGLTFDIEVDGGIDDKTIHSAKNAGANVFVAGSYLFKGDLDANVAKLRAALN
                     A"
     gene            complement(19927..20802)
                     /gene="rsgA"
                     /locus_tag="AC1PJC_000019"
     CDS             complement(19927..20802)
                     /gene="rsgA"
                     /locus_tag="AC1PJC_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HIP6619076.1"
                     /translation="MQGRIIKALAGFYYVEADGQIYQTRARGNFRKKGQTPYVGDFVD
                     FSAEENSEGYILKIHERKNSLVRPPIVNIDQAVVIMSAKEPDFNANLLDRFLVLLEQK
                     DMDPIIYISKMDLVEDWAEMDAFKAIYEKIGYPFVYSLEELTPLLQDKVTVFMGQTGV
                     GKSTLLNRIAPELALETGAISDSLGRGRHTTRAVSFYNVFGGKIADTPGFSSLDYEVK
                     EAEALTDCFPEIAESSQDCKFRTCTHTHEPDCAVKEAVASSAISQSRFDNYLQFLSEI
                     QNQRETYTKVSKKFK"
     gene            20927..21008
                     /locus_tag="AC1PJC_000020"
     tRNA            20927..21008
                     /locus_tag="AC1PJC_000020"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:20960..20962,aa:Leu,seq:cag)
     gene            complement(21281..22858)
                     /locus_tag="AC1PJC_000021"
     CDS             complement(21281..22858)
                     /locus_tag="AC1PJC_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIP6619077.1"
                     /translation="MKKRNFWLTLSCIFAVALLNVGFLYQYRYIIDAIAAGDRQAFVS
                     YFVLMGLTVLVMLVFEYIRQIANVSYLNQVGFQLQATFIGKIFDLPFREFVEQGAGAY
                     ISQLNNDLETVKEDYYDAFFTIFQGACTFGIASLALLSLDGLTAIFLILISFLPVVIP
                     YLFKKRRRLNQEAISDSQQVYNTRVSDVFLGYLQVKNSRQRQQVLDGLNDRYQAVNDK
                     VDQANRTTVTMRLLVGFVFYLTTLSIIFIGGFQVFSGALTIGGLTAILTISEQLVDPI
                     NSIAAAFLDRHAVKELKQEFELSTLGQETKGQELASAFQSMQLVKASYAIGDKQVFED
                     LTVAFERGKKYLILGESGSGKSSLALILTKNSQLQAGDIYFDKTSLADLSYQAIQDKI
                     AYLPQEGALFHDTVLYNLTMGQVVSEDRLMFLIKTMNLDSRFPSYASLSEEISDDSGL
                     SGGQKQRLLLIRALLQDKDILLLDESLSALDQETYTVIEAYLTSLADKTLIHISHRVS
                     DEVLSRYDGVVRIGESN"
     gene            complement(23001..25445)
                     /locus_tag="AC1PJC_000022"
     CDS             complement(23001..25445)
                     /locus_tag="AC1PJC_000022"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HIP6619078.1"
                     /translation="MKQINPKACKQFILVMVMTVLLAMGRALLLSGVSFPLWFVPLTL
                     LAYLIFTFYVLVLLNKYEKFVKTKTFAKYVCYFLGFLYLVNLVYRINAKKYQPWNIFR
                     NNLFQFELLLMLLLPVLLAFLWRKNGRIRDKLSKWSASHLVPDSYLLLTSLLSLSPLA
                     ISYWKDSHYESLVENGSYVEFFSQTPLFASIHFIGTYIFLRYLHKAFVEFKANRTNVH
                     SMLFISLALATLSHIGYQASMAGGTGSYFTRHLFPGAIVFQIACLFFLNVIISLVINR
                     QILSVAIIASLNVTLIAANFLKFRYRSEPMTPNDFKWIGNMGMILSFISLRVVLISLV
                     FLVILFFVYRRIHKKYFQGQIVKSIWKRLAGISVIVSLILGMGWAIRNEKDHKIVGWI
                     PILSQVNNWRNVDWKGYAFVARYRTLSFLWLQQLSKTSMEKPENYSEKTMKAIVKKYT
                     ALAEKINAKRTGQLTDQTVIYILSESLADPRRIPGVTLSQNVLPNIEYIMSQTTSGLM
                     KSDHYGGGTANIEFQVYSGLPFYNYNSSISSVYLDVAPNMKKLPSISDLYPADNRVAI
                     HPYYDTSYNRNSIYKQLGIEQFYTLNSAKYPLAVTPEDYQGNFVSDKKTYDLILEQVR
                     SGTNTFVSAITMQNHVQWNSLEPAGITASGEGFTAEENENLTSYVRLLSFTDQATRDF
                     LDQLKTLDKKVTVVFYGDHLPGLYPESAFVTDPSAQYKTDYFVWSNFETEDYHYDLVN
                     SSDMNALMLETTNNKVSPYYALLTEVLHKDRVGQAERDAKVAEELKLVQYDLSTGKGY
                     LLKYKDFFKVATETTE"
     gene            complement(25458..27188)
                     /locus_tag="AC1PJC_000023"
     CDS             complement(25458..27188)
                     /locus_tag="AC1PJC_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619079.1"
                     /translation="MLKTMLKKHPHLVALGLFVGFSLLLLVPHLLTKGMVTGADLIFH
                     YNRFYDAAMQMKEGNFSYIISLYGYQQSGRIVNALYGPYFAYLQGALVLLSGTWFRYQ
                     ILTNLLLGTLSATSLYLLMREVKVKYAHSILLSLFFVTTYSIQYWWATQGFTSWGVAL
                     FPLCLIPAVRFLQTKKVPIFLMAGAVGLMLQVHMLSTLFLVIAYGVLFLIGWWKSDQK
                     MKIIGQVALSVGIFLLLTINIWLPLIYINATNTLVPPFVNKKFVLNTVNWLKVYFLVY
                     PYPLPIFFGIYLYFLVKNWKKQSLVLAGLALTYAVFLILSTNLFPWQLFAGKGITLVE
                     LIQFPFRFFLYANALLLAVVGVQVSGLSDKLQKIFSGVALASLLVSVGFLWNQSYKEI
                     NGHYYSDTFLQKRIHTTLYGTTEELRASFHSKDLGEFIHIAQKSTPDYVPDLSDRTEH
                     MTNEESDNTYFTYRDQVILPNQDFTKAVDGDQLVVTWTASEAEETAVPIIVYQDSQLV
                     LNEQVLDREELELSTIGVPRVTSKKGQNTLILSYKQQWWLWPVIIISLTGWLLWLLYY
                     VFAYRKSNLS"
     gene            complement(27391..28263)
                     /gene="rsmA"
                     /locus_tag="AC1PJC_000024"
     CDS             complement(27391..28263)
                     /gene="rsmA"
                     /locus_tag="AC1PJC_000024"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018030634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HIP6619080.1"
                     /translation="MRIADKNVTRAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEI
                     DQNVNVIEIGPGIGALTEFLAENAAEVMAFEIDDRLIPILADTLGRFDNVTVVNQDIL
                     KTDLQTQIQNFKNPDLPIKVVANLPYYITTPILMHLIESKIPFSEFVVMMQREVADRI
                     SAEPNTKAYGSLSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRREQPLVSVKD
                     EDFFFRVSKASFVHRRKTLWNNLTNHFGKSEEVKDRLTQALGMAELEASVRGEALSMA
                     DFARLSDSLQEVGL"
     gene            complement(28260..29054)
                     /locus_tag="AC1PJC_000025"
     CDS             complement(28260..29054)
                     /locus_tag="AC1PJC_000025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HIP6619081.1"
                     /translation="MEEYLVVIDKKLLECLANIDYESTGARVIDLNSDTDRNAFNLPK
                     RVDESLRREEYDCLVKKEDHIDYSGCEIVNYRNKVGDARALLFPDKVDRSFKQRVQKN
                     TDRKSKGQKKEVHHSGAEPPGFNQEDNKQFEALNGHYFYERCHLIPYRFVNKKAIYGQ
                     LFTGTRFLNDNRNFKEDKHPCMQIYEDCVADWLLESDVKFIYYQAIPVYQDFDIVPRG
                     VRLIAKCYNDNNEEIVQNNRQFDIYLLNVTPGYCIDYATGKWKEHT"
     gene            complement(29136..29393)
                     /locus_tag="AC1PJC_000026"
     CDS             complement(29136..29393)
                     /locus_tag="AC1PJC_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008219 - cell death [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Txe/YoeB family addiction module toxin"
                     /protein_id="HIP6619082.1"
                     /translation="MGIHFTEDAWEDYLYWQGQDKKTLKRINKIIKDMQRHPFEGIAK
                     PEPLKYDYQGAWSRRIDAENRLIYMVEADQLYILSLKDHYK"
     gene            complement(29395..29655)
                     /locus_tag="AC1PJC_000027"
     CDS             complement(29395..29655)
                     /locus_tag="AC1PJC_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0097351 - toxin sequestering activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0045927 - positive regulation of growth
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HIP6619083.1"
                     /translation="MEAIVYSHFRNHLKDYMKKVNDEFEPLVVVNKNPEEDIVVLSKS
                     EWDSLQETLAVARNTYLSQKVLRGMAQVKAGKTQERHLIEAD"
     gene            29901..29984
                     /locus_tag="AC1PJC_000028"
     CDS             29901..29984
                     /locus_tag="AC1PJC_000028"
                     /inference="COORDINATES: protein motif:HMM:NF028245.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative holin-like toxin"
                     /protein_id="HIP6619084.1"
                     /translation="MSVYEAIELMINFGILLLAILTFQRKK"
     gene            complement(30170..30625)
                     /locus_tag="AC1PJC_000029"
     CDS             complement(30170..30625)
                     /locus_tag="AC1PJC_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase"
                     /protein_id="HIP6619085.1"
                     /translation="MSRREQVVLTNMCMITDGQQVLIQDRKSEKWPGVTFPGGHVEHG
                     ESIVSSVVREVKEETGLTVSNLELCGIQNWTDPIDHYRYLVFCYKTSHFSGSIQSSDE
                     GEVFWIEREDLKNVQLADGFETMLEIFEQPQLTENFYWFEDGEWKVENK"
     gene            complement(30629..30997)
                     /locus_tag="AC1PJC_000030"
     CDS             complement(30629..30997)
                     /locus_tag="AC1PJC_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619086.1"
                     /translation="MDRVYAVKCLVKNEFEPSYENYSSYEEVTYLLPADVLVWDDEQV
                     DKNKLADYLRGLVEDGYVNADGIWKQSRLFHIAGVQEMDDRVEFDGLAVEVYRWFYNF
                     ERPVTEEEFLNLYYFDDLGR"
     gene            complement(30990..31559)
                     /gene="rnmV"
                     /locus_tag="AC1PJC_000031"
     CDS             complement(30990..31559)
                     /gene="rnmV"
                     /locus_tag="AC1PJC_000031"
                     /EC_number="3.1.26.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043822 - ribonuclease M5 activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease M5"
                     /protein_id="HIP6619087.1"
                     /translation="MTQKIKIQEVLVVEGKDDTANLKRFYEVDTYETRGSAISDDDLE
                     RIEKLHDLRGVIIFTDPDYNGERIRKIIMQAIPTVKHAFLQRDEAAPKSKTKGRSLGI
                     EHASFEDLEKALAGVRGYYDDEHNFDITKSDLMRLGLLMGGDSRKRREHLGEKLRIGY
                     CNGKQLLKRLELFGISLVEVEEAMESYHG"
     gene            complement(31543..32325)
                     /locus_tag="AC1PJC_000032"
     CDS             complement(31543..32325)
                     /locus_tag="AC1PJC_000032"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004536 - DNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HIP6619088.1"
                     /translation="MIQIFDTHTHLNVEQFDGRVQEELDFAKEMGVTLHNVVGFDRAT
                     IDKAMELADQHPEIYLTLGWHPTEAGTYDEEVERYLLKALKHPKVIALGEIGLDYYWM
                     TADKETQARVFKRQMELAKQLDLPFVVHTRDALEDTYQIIKEVGVGPRGGIMHSFSGT
                     LEEAQAFMDLGMHISFSGVVTFKKAVELQEAAQALPLEKILVETDAPYLAPVPKRGRE
                     NRTGYTRYVVDMLAQLRNQSVEEVARATYENARSLFRIDSEN"
     gene            complement(32432..32569)
                     /gene="rpmH"
                     /locus_tag="AC1PJC_000033"
     CDS             complement(32432..32569)
                     /gene="rpmH"
                     /locus_tag="AC1PJC_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HIP6619089.1"
                     /translation="MKRTFQPSKIRRARKHGFRSRMATKNGRRVLAARRRKGRKVLTV
                     A"
     gene            complement(32737..33732)
                     /gene="jag"
                     /locus_tag="AC1PJC_000034"
     CDS             complement(32737..33732)
                     /gene="jag"
                     /locus_tag="AC1PJC_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding cell elongation regulator Jag/EloR"
                     /protein_id="HIP6619090.1"
                     /translation="MKFTGASVEEAIQNGLVELNIPRKKAHITVVAREKKGFLGFGKK
                     PAIVDIDVINETTVVKANQKAVRGVPSEINDLNEPVKSVSEATIDLGKVVAAVKEFEK
                     SGQTLDDDIKAQILKNEKEATTILEETGRIEILSEDLLTTTDATTSAKEDVNQEVVSE
                     NQADNFADLDIKIEPQYDIEQVVSEVTAYVQEILDDMDVEARIDTSHNRRTINIQVDT
                     NEPGRVIGYHGKVLKALQLLAQNFLYNRYERNFYITINVNDYVEHRAEVLQGYAQKLA
                     ERVLAEQEAYHTDPMSSSERKIIHRIISKMDGLTSYSEGSEPNRYVVVDIEGNHD"
     gene            complement(33752..34564)
                     /locus_tag="AC1PJC_000035"
     CDS             complement(33752..34564)
                     /locus_tag="AC1PJC_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YidC/Oxa1 family membrane protein insertase"
                     /protein_id="HIP6619091.1"
                     /translation="MKKKVKWVGLLVASLIVLTACGTGPVTSQSTDAWDRLIYWFASI
                     IQFLSINGQIGIGIILFTILIRTLLLPLFQIQMNSSRKMQELQPQLKKLQAEYPGTDM
                     ESRQQLYEATQALYKENGVSMRASMIPLFIQMPILLALFQALTRVEALKVGHFLWLNL
                     GEPDPFFILPILAAVFTFLSSWLTNKSAIEKNMAMTIMTYVMPVIIFFFAVAAASGVA
                     LYWTVSNAYQVAQTLVFNNPFKIIAERQAKIDAEKERQAKIRRAQKKAQKKK"
     gene            complement(34548..34907)
                     /gene="rnpA"
                     /locus_tag="AC1PJC_000036"
     CDS             complement(34548..34907)
                     /gene="rnpA"
                     /locus_tag="AC1PJC_000036"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HIP6619092.1"
                     /translation="MKKSYRVKRERDFNDIFTKGNNVANRRFVVYRLPKEQKHFRVGL
                     SVSKKLGNAVMRNKIKRRIRHILIECQHQLVADDFVIIARKSVEELSYQEMKQNLIHV
                     LKLAKLYQEGVVIEKES"
     gene            complement(34978..36372)
                     /gene="argH"
                     /locus_tag="AC1PJC_000037"
     CDS             complement(34978..36372)
                     /gene="argH"
                     /locus_tag="AC1PJC_000037"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - L-arginine biosynthetic process
                     via ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HIP6619093.1"
                     /translation="MEAKKLWGGRFEASLEEWVEEFGASIRFDQKLAKYDIQGSLAHV
                     KMLGQTGIISQAEAQVIQAGLEELLEEYEAGKLVFDIRNEDIHMNIESLLTEKIGSVA
                     GKLHTARSRNDQVATDMHLYLKDTLFQVVDKLTNLRQILVDLAQEHVETIMPGYTHLQ
                     HAQPISFAQHLLAYYNMFSRDSERFAFNMQHTNVSPLGAAALAGTTFPIDRRMTSDLM
                     GFAKPYSNSLDAVSDRDFILEFLSNASILMMHMSRLCEEIINWCSHEYQFVTLSDTFS
                     TGSSIMPQKKNPDMAELIRGKTGRVYGNLVGLLTVMKSLPLTYNKDLQEDKEGMFDTA
                     ETVLISIDILAGMLKTMTVHKERMTQSTEKDFSNATELADYLASKGLPFRKAHEIVGK
                     LVLECSKAGYYLQDVSFETYQAISPLIQADIYDALSSKVAVSRRNSLGGTGFESIADQ
                     LKSAKEEIQNAKSL"
     gene            complement(36386..37579)
                     /locus_tag="AC1PJC_000038"
     CDS             complement(36386..37579)
                     /locus_tag="AC1PJC_000038"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - L-arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HIP6619094.1"
                     /translation="MTKEKLILAYSGGLDTSVAIAWLKKDYDVIAVCMDVGEGKDLDF
                     IHDKALSIGAIESHVLDVKEEFAQEYVLPALQAHAYYEQKYPLVSALSRPLISKKLVE
                     MAHKAGATTIAHGCTGKGNDQVRFEVAIAALDPSLKVVAPVREWKWAREEEIIFAKEN
                     GVPVPADLDSPYSVDQNLWGRANECGVLENPWNEAPEDAFGITTSPENAPDTPEYVDI
                     EFQAGVPVAINGETLSLANLIQKLNVIAGKHGVGRIDHVENRLVGIKSREIYECPGAI
                     TLLTAHKEIEDLTLVREVSHFKPIVSNELSNLIYNGLWFNPATDALKAYLAQTQAVVN
                     GTAKVKLYKGSAKVVARKSPNSLYDEDLATYTSADTFDQDAAVGFIKLWGLPTKVNAE
                     IHKKS"
     gene            complement(37772..38320)
                     /locus_tag="AC1PJC_000039"
     CDS             complement(37772..38320)
                     /locus_tag="AC1PJC_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619095.1"
                     /translation="MSQLTLSSKNSVKQLSISAILTAFAILIPLMMPIKIIIGPASYT
                     LASHIPLFIAMFISPATAIFVALGSSLGFFLAGFPIVIVFRALTHLFFLTLGAVLVKR
                     FPILMDSKRFLLLGIGLNLLHGLGEYIVVMVLTSGQQTSATYWITMLGLVGVGSAIHG
                     LLDFSLAYYFWKILKERKIYQP"
     gene            complement(38393..38917)
                     /locus_tag="AC1PJC_000040"
     CDS             complement(38393..38917)
                     /locus_tag="AC1PJC_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription repressor NadR"
                     /protein_id="HIP6619096.1"
                     /translation="MKATERRKKILSLLRESLDPLAANYLAKEFGVSRQVIVGDVALL
                     RAEGEAVLATPRGYLLQSSLPSTEGAYIRKIACQHGPEEVEKELTILLEGGAQILDVE
                     IEHPIYGLLSGKLNIASLEDRDHFLDALGQYQGVLLSNLTEGVHTHTVSFPSVQAYNE
                     LSAALKHAGILLEN"
     gene            complement(39023..39704)
                     /locus_tag="AC1PJC_000041"
                     /pseudo
     CDS             complement(39023..39704)
                     /locus_tag="AC1PJC_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775370.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
     gene            39825..40325
                     /locus_tag="AC1PJC_000042"
     CDS             39825..40325
                     /locus_tag="AC1PJC_000042"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016817 - hydrolase activity, acting on
                     acid anhydrides [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009132 - nucleoside diphosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HIP6619097.1"
                     /translation="MEIWNAYTADGHLTDHTLTRGETIPHGLYHLVVECIIRHHDGNT
                     LFMKRDSTKPSYPDYYEATAGGSALFGEIAEQAILREVREETGIELTADQLRHHTHFV
                     AHDDQCIFHCYWAETDWDKAAIQLQANETSNYIWVPQEKLKDFLETELVIPRQKVCVE
                     SLFLQS"
     gene            complement(40374..41321)
                     /gene="mmuM"
                     /locus_tag="AC1PJC_000043"
     CDS             complement(40374..41321)
                     /gene="mmuM"
                     /locus_tag="AC1PJC_000043"
                     /EC_number="2.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047150 - betaine-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase"
                     /protein_id="HIP6619098.1"
                     /translation="MGRFKELLEQKEYIILHGALGTELEFRGYDVSGKLWSAKYLLEN
                     PQYIKDIHKDYIRAGADLVTTSTYQATFEGLAEVGLSQAEAEDLICLTVDLAKEARDE
                     VWAELSEAEKVHRTYPLISGDVGPYAAYLANGAEYTGDYGNISLEELKAFHRRRMELL
                     LEQGAELLALETIPNVLEAQALVELLAEDFPEVEAYISFTSQDGQSISDGTAIEKIAE
                     LVNSSDQILAVGLNCTAPSLYPAFLSQLREKTDKPFVTYPNSGEVYDGATQTWKEKAD
                     DSHSLLDNTLEWHELGAKVVGGCCRTRPADIADLVAGLK"
     gene            complement(41331..42707)
                     /locus_tag="AC1PJC_000044"
     CDS             complement(41331..42707)
                     /locus_tag="AC1PJC_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015171 - amino acid transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0003333 - amino acid transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HIP6619099.1"
                     /translation="MENHNFENQGTFNREMNSRHLQMLSIGGVIGTGLFLSSGYTIAQ
                     AGPFGAVAAYLFGAVMVYLVMFSLGELSVAMPVTGSFHTYATKFISPGTGFMVAWMYW
                     LCWVVALASQFVGAAQLMQRWFPSVPIWIFATIFAVIVFGLNTLSVGWFAKAEDALSS
                     IKVYAIAAFIVLGTLAIFGILPFEGTNAAPLFTNITAQGLLPNGLVGLISVMLSVNYA
                     FSGVEMIGIAAGETDNPKKAVPQAIKSTIGLLVIFFVLTIVVLAALLPMSEAGVTEAP
                     FVLVLDKIGFPYAADIMNFIILTAILSASTSGLYASSRMLWSLANEGMISKELVKINK
                     HGVPMRGMILSMIGVVIALIASIYAEDTIFLALVSIAGFAVVIAWLAIPLAQIGFRRE
                     FLKTHSEDELEYKTPFSPTLPWITVILLVISIIGIGWDPSQRAGLYFGVPFMIGCYIY
                     HYIRFKKW"
     gene            complement(42846..44300)
                     /gene="gltX"
                     /locus_tag="AC1PJC_000045"
     CDS             complement(42846..44300)
                     /gene="gltX"
                     /locus_tag="AC1PJC_000045"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HIP6619100.1"
                     /translation="MTKPIRVRYAPSPTGLLHIGNARTALFNYLFARHHGGTFLIRIE
                     DTDRKRHVEDGERSQLENLRWLGIDWDESPETHEQYRQSERLDIYQKYVDQLLAEGKA
                     YKSYVTEEELAAERERQEAAGETPRYINEYLGMSEDEKAAYIAEREAAGIVPTVRLAV
                     NETGIYKWNDMVKGEIEFEGGNIGGDWVIQKRDGYPTYNFAVVVDDHLMEISHVIRGD
                     DHIANTPKQLMVYEALGWEAPEFGHMTLIINSETGKKLSKRDTNTLQFIEDYRRKGYM
                     PEAVFNFIGLLGWNPGGEEEIFSREQFIQLFDENRLSKSPAAFDQKKMDWMSNEYIKN
                     ADLETIFNLAKPFLEEAGRLTDKAEKLVELYKPQMSSADEIVGLTDLFFSDFPELTDE
                     EKEVMAGETVPTVLNALKEKLEAMTDEDFQPDNIFPQIKAVQKETGIKGKNLFMPIRI
                     AVSGEMHGPELPNTIYLLGREKSIQHIDNMLKSL"
     gene            complement(44616..44909)
                     /locus_tag="AC1PJC_000046"
     CDS             complement(44616..44909)
                     /locus_tag="AC1PJC_000046"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619101.1"
                     /translation="MRRYRLEITKFGFPIIFIIWLGSTIFLWQMILDFFRRKKEAGIS
                     VPSLVNTALIIVTVAFIVFFTLSFYILLRPPRTRHQGRSLKEVLAYESRKEML"
     gene            complement(44910..45629)
                     /locus_tag="AC1PJC_000047"
     CDS             complement(44910..45629)
                     /locus_tag="AC1PJC_000047"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619102.1"
                     /translation="MLKALKSIWDAFRSWLLFNWLIAYCMFATISLYQFMQYDPTFSV
                     LILIVTFLVIFGIPLLAMRLFKLSSDGVLTCFPLLALFLLLIGFPNPVYIIGAMVVLL
                     IKPRGRTVIENIVKSFSTNNLKYLSISLFLPLLVLFFLVLEEGEQVTFVKTLIVRVTV
                     LYIVIILINCALTYRKSRLEEHVKTQVQIRALFELFEHYQITEETYLVICESCSAENF
                     LELGQGQSCSHCGAWLARKEP"
     gene            complement(45622..45900)
                     /locus_tag="AC1PJC_000048"
     CDS             complement(45622..45900)
                     /locus_tag="AC1PJC_000048"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619103.1"
                     /translation="MYQLFRFLSLVFMGLANTILALLLFSHTILYTKFIAGTIVFSLS
                     GLILAGFVYYSCGVLENIKLKVNALDEIYQGKVRYKDYLREKKEQSHA"
     gene            complement(45900..46310)
                     /locus_tag="AC1PJC_000049"
     CDS             complement(45900..46310)
                     /locus_tag="AC1PJC_000049"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619104.1"
                     /translation="MSKNIWIYVTGVLVMLTTVALGLLIPHKEIGLYFIALGLLVLSE
                     FLFFLQLIVKRHFADWLPINIVTVIWVIFQSIMLFISNYISVRVFWIVEVIVIGGVAI
                     IGSLTATDSHYRRVRREIIADNSEDVFTPKQGDY"
     gene            complement(46319..47383)
                     /locus_tag="AC1PJC_000050"
     CDS             complement(46319..47383)
                     /locus_tag="AC1PJC_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001196977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HIP6619105.1"
                     /translation="MSLNLFEVVRYEGEDTRNILAWRHPNKNMKPGTTLIVNPGQRAV
                     FFSNGRAVASYEEGKHKIEGNNTQGLAKLKSFVSGGVSPDSSFLWFVNMYDLQPIGWG
                     TPSPILVRDPESQIPVELKTHGNFIPRIIDLETFILEFMPSYPDVITAEVFQKRFRQA
                     AIGTITSGISRVIANSRIATIDIEMHSHDIAQGLSELLSNRFAKYGISVQEFNIEALK
                     VNQDSEGYKEVFRFHKQVLSAKGERSTREIEGYSYQEERQFDVLEKAAQNEGSAGNLM
                     GAGMGVSMGLGMGANFGTLMGNLGQGAHSAQQPQIPIQTEKMINSENSPTVSLAKFCG
                     QCGTAFTDGAKFCSNCGQSR"
     gene            complement(47488..48765)
                     /locus_tag="AC1PJC_000051"
     CDS             complement(47488..48765)
                     /locus_tag="AC1PJC_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIP6619106.1"
                     /translation="MKKILKNATYLWILTADMLSNFGDVVYYLALMNYVLLVPNSRLA
                     LAIVTFSEIFPSFMGLFTGYLADKTVNKISTIKLTLLFRVLLYLILGFCMGFEPALWI
                     VVVAASFNVFADFAGFYENGLYTPLGLRVAPKEEREQYSAFRQTVTSLLNIAFQALSA
                     LLVGLLSYQNLAFLNAGTFLASLLIMQLLTPVFRKLLTEQPLKIAEQPIQTEQKTKRP
                     GILASFKQAIVELRKIPEFRLVLITNPLINACGAILYPILVLLISEDPGLVFLNVETT
                     LALTILIFFIGHILGSTLVFTLFKKTSMVTLEVAATFSLLGVFVGMLLHQLPIIFFFL
                     TTMGISSGASGPKFNAKFVNSMPEEQLATIGGAVSTYFMLGQAFTRLLVSGLVLVLAV
                     DQISGLFLTATGLLVLYVLYWLARNQKTPQNQK"
     gene            complement(48857..49522)
                     /locus_tag="AC1PJC_000052"
     CDS             complement(48857..49522)
                     /locus_tag="AC1PJC_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LiaF transmembrane domain-containing protein"
                     /protein_id="HIP6619107.1"
                     /translation="MKRNGLGIALLILAGLVLFQDYLPAVEFPLWKLALVVGWSYLFL
                     KAMIKKQLVTSFVWGTLVFIVLNSHFDWLEIDTWTLILGAILACTGVKLLIKPRRSKN
                     MVDTKSFVTGVIGDKGRDTAFGSSTRYIHEENFIHDSVDVAFGSSTVYFDQAVILGDK
                     ADFHIDAAFSNITLYLPADWQAVVELDSAMSTTNNYASEPKEKVLLVTGDMAFSTLNI
                     YSM"
     gene            complement(49527..49973)
                     /locus_tag="AC1PJC_000053"
     CDS             complement(49527..49973)
                     /locus_tag="AC1PJC_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HIP6619108.1"
                     /translation="MKVRIEFDDILDQVEVVIRTSQLGPEIEQIQQALQQVSRPSLVF
                     YKGSSEYFLSLGDILFFETDGTKIFAHTGDDAYEVKMKLYELEEHLPIYFCRVAKSTI
                     VNSKSVYSLNKSFSGTSRISFYKTHKEVHVSRHYYHLLKEKLQEMR"
     gene            complement(50113..50304)
                     /locus_tag="AC1PJC_000054"
     CDS             complement(50113..50304)
                     /locus_tag="AC1PJC_000054"
                     /inference="COORDINATES: protein motif:HMM:NF012948.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009986 - cell surface [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HIP6619109.1"
                     /translation="MELVSEIVPKPAFPQPAKESERQMLPNTGEQSSAWTGILGAGLL
                     LGAFYKRRKREDDKRTPLK"
     gene            complement(53383..56118)
                     /locus_tag="AC1PJC_000055"
                     /pseudo
     CDS             complement(53383..56118)
                     /locus_tag="AC1PJC_000055"
                     /inference="COORDINATES: protein motif:HMM:NF016196.6"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="KxYKxGKxW signal peptide domain-containing
                     protein"
     gene            complement(56381..57139)
                     /locus_tag="AC1PJC_000056"
     CDS             complement(56381..57139)
                     /locus_tag="AC1PJC_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00266 family protein"
                     /protein_id="HIP6619110.1"
                     /translation="MSDNRMKYTIDSNMQFPLVEIALEAGESAYIQQGSMVYHTPSVT
                     LNTKLNARGGSGFGKLMGAIGRSMVSGESMFITQAISNSNDGKIALAPSTPGQVIALE
                     LGAEQYRLNDGAFLALDGSAQYKMERQSVGKAFFGGQGGLFVMTTEGHGTLLANAFGS
                     IKKLTLDGGSITIDNAHVVAWSRDLDYNIHMENGFLQSIGTGEGIVNTFTGYGEIYVQ
                     SLNIETFAQVIGNHIVGAGGDGGGGSTSLLDAIF"
     gene            complement(57339..57833)
                     /locus_tag="AC1PJC_000057"
     CDS             complement(57339..57833)
                     /locus_tag="AC1PJC_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004089 - carbonate dehydratase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-class carbonic anhydrase"
                     /protein_id="HIP6619111.1"
                     /translation="MSYFQNFMKANKAYVDLHGDYHLPLRPKTKVAIVTCMDSRLHVA
                     QALGLALGDAHILRNAGGRVTEDMIRSLVISQQQLGTREIVVLHHTDCGAQTFTNEEF
                     AVQLKRDLGVDVAGQDFLPFTDIEESVREDIALLKQSPLIPDDVEISGAVYDVDTGRM
                     IEVI"
     gene            complement(57957..59324)
                     /gene="radA"
                     /locus_tag="AC1PJC_000058"
     CDS             complement(57957..59324)
                     /gene="radA"
                     /locus_tag="AC1PJC_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HIP6619112.1"
                     /translation="MTIAKKKTTFVCQSCEYHSPKYLGRCPNCGSWSSFVEEVEVAEV
                     KNERVSLTGEKTRPMKLNEVSSIQVARTKTNMEEFNRVLGGGVVPGSLVLIGGDPGIG
                     KSTLLLQVSTQLSTIGTVLYVSGEESAQQIKLRAERLGDIDSEFYLYAETNMQSIRTE
                     IEKIKPDFLIIDSIQTIMSPDISSVQGSVSQVREVTNELMQIAKTNNIATFIVGHMTK
                     EGTLAGPRTLEHMVDTVLYFEGERQHTFRILRAVKNRFGSTNEIGIFEMQSQGLVEVL
                     NPSEVFLEERLDGATGSAIVVTMEGTRPILAEVQALVTPTMFGNAKRTTTGLDFNRAS
                     LIMAVLEKRAGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVALASSYKDKPTNPQECFI
                     GEIGLTGEIRRVNRIEQRINEAAKLGFTKVYAPKNSLTGIKVPKEITVIGVTTIGEVL
                     QKVFN"
     gene            complement(59331..59864)
                     /locus_tag="AC1PJC_000059"
     CDS             complement(59331..59864)
                     /locus_tag="AC1PJC_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HIP6619113.1"
                     /translation="MQILFVRHSEPDYSMFDQHDNPRLYAGFGRDLAPLTEKGRALAK
                     EVANSPVFAQAQVVIASSVTRALETATYIAHAQQLPLLVEPFFHEWRPDMTGQNASQD
                     EAVLAHRLFLENSGAVPESSPVRYETAAEMRERFLQALEKYKAYDRIVIVCHGMLIRQ
                     FVPKETIAYCEILEYTL"
     gene            complement(59871..60314)
                     /locus_tag="AC1PJC_000060"
     CDS             complement(59871..60314)
                     /locus_tag="AC1PJC_000060"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000701975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HIP6619114.1"
                     /translation="MKLRGFELVSQFTDENLLPKRETAHAAGYDLKAAETVSLEPGEI
                     KLVPTGVKAYMQANEVLYLYDRSSNPRKKGLVLINSVGVIDGDYYGNPANEGHIFAQM
                     RNITEETVVVEAGERIVQAVFAPFLLADGDQADGVRTGGFGSTGK"
     gene            complement(60545..60904)
                     /locus_tag="AC1PJC_000061"
     CDS             complement(60545..60904)
                     /locus_tag="AC1PJC_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HIP6619115.1"
                     /translation="MQRIFYLVFGFVSLMVGVIGIVLPIVPTTPLLLLAGFCFARSSK
                     RFEKWLRNTKIYQFYVADYVETKSISRKRKKQIIWQIYLLMAISIWLAPILLVKIGLG
                     LLTIFITYYLFWVIPEK"
     gene            61032..61634
                     /locus_tag="AC1PJC_000062"
     CDS             61032..61634
                     /locus_tag="AC1PJC_000062"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007892530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008752 - FMN reductase [NAD(P)H] activity
                     [Evidence IEA];
                     GO_function: GO:0008753 - NADPH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA];
                     GO_function: GO:0052873 - FMN reductase (NADPH) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HIP6619116.1"
                     /translation="MKLLGLVGTNSARSTNRKLLQYIEQHFADKADIELVEIKELPIF
                     NKPANRELPEIVKELVAKIEAADGVIIGTPEYDHSIPAVLMNALAWVSYGVYPLLNKP
                     VMITGASYGTLGSSRAQLQLRQILNAPELKATVLPDEFLLSHSLQAFDANGELIDLET
                     SQKLDAIFDDFRLFVTMTSKLSNAKKLLQKEAENFDWENL"
     gene            61649..62884
                     /locus_tag="AC1PJC_000063"
     CDS             61649..62884
                     /locus_tag="AC1PJC_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007892301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HIP6619117.1"
                     /translation="MKFVGIVGSNADQSYNRMLLQFIQRHFKVKFELELLEIKDVPMF
                     NQDEDQSDCFAIQYLYNKITRADGVIIATPEHNHTITPALKSTLEWLSFNLHPFENKP
                     VMIIGASYYDQGTSRAQVHLRKILDAPGVNAYTLPGNEFLLGKAKEAFDDKGNIINEG
                     TVKFLESCLDNFIKYVGVVSKLKKPKPIAPEDLDCTKPIATTITGVDPDDPDWLEKAS
                     KLVNAVEGDTYVKLDNGLLTVNQLNMFLNAMPFELTYADDNNQFLYYNNSHQEPDTML
                     GKRVLAQVGNRLSTVHGTLPPARMKNVEWVVGTLRNGNQEYVRTIVPGTPAEIINTHN
                     YQAMYYPDGSYAGINEIIFNFKPWLDWYLEATGQRLVGGSGTAAAPAHVDATSGASDA
                     GSAPATSTPTDADSGASAH"
     gene            63114..63908
                     /locus_tag="AC1PJC_000064"
     CDS             63114..63908
                     /locus_tag="AC1PJC_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HIP6619118.1"
                     /translation="MSPFQEKISAAVSKKEALFDESLGRYALRSMYAGAYLTMSTAVG
                     IIGADVIASQFPSLSRFVFTFIFAIGLVFVLIFGGELATSNMMYLTTGAYYKQISWKK
                     VTQMLLYCTFFNFVGATILAWLFNQSFSYLNLSDKSFVVNAVTIKLGKSDWSNFIEGI
                     TANMFVNMAILGFMLIKEQSAKFFVIISSIFMFVFLINEHLVANFASFMLLAFNATRS
                     NVEAFNMINILRQWIVVFFGNWLGAGLFIGIAYAWLNQTKTNHIEQ"
     gene            complement(63997..65781)
                     /locus_tag="AC1PJC_000065"
     CDS             complement(63997..65781)
                     /locus_tag="AC1PJC_000065"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6619119.1"
                     /translation="MKTLRFFWFYFKRYKLSFAVIFLAIVAATYLQVKTPVFLGNAIA
                     EMGKIGQAYFMANQTGQADFQPDLSDFNGVMLNLFFAYAATVVASLIYTLLFTRIVAH
                     STNRMRKGLFGKLERLTVAFFDSHKDGDILSRFTSDLDNIQNAFNQSLTQVVTNIALY
                     VGMVIMMFRQDTRLALVTIASTPVALIALVVIIRLSRKYTDKQQAAVSKLNAYMDEKI
                     SGQKAIIVQGVQEETIDGFLELNEEVRRTTFKGRLFGGILFPFMNGMSLVNTAIVIFA
                     GSSIVLNDSSLETAAALGLVVTFVQYSQQYYQPIMQVAASWAELQLAFTGAHRIQEMF
                     DEPEEVRPQNAPLFTELKEGVEIKDIDFGYLPGQKVLDKVSISAPKGKMVAVVGPTGS
                     GKTTIMNLINRFYDVNGGSVAFDGRDIREYDLDSLRDKVGIVLQESVLFSGTIADNIR
                     FGDESISQEMVETAARATHIHDFIMSLPEGYETFVTDDENVFSTGQKQLISIARTLLT
                     DPQVLILDEATSNVDTVTEAKIQKAMEAIIAGRTSFVIAHRLKTILNADEIIVLKDGK
                     VIEQGNHSQLLKLNGFYAELYHNQFVFE"
     gene            complement(65782..67488)
                     /locus_tag="AC1PJC_000066"
     CDS             complement(65782..67488)
                     /locus_tag="AC1PJC_000066"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6619120.1"
                     /translation="MFKEAILRYKWYALASVLLTSIVVATTLMQPSYLQDVLTAVLAN
                     DKDEIVRVGKLLLIIAGIGLLAGLVNTISAAKISQGVSADIREKTFRKIQSFSYANIE
                     EFNAGNLVVRMTNDVNQIQNLVMMLFTVLMRVPLLFVGAFVMAVRTMPELWWMIILMV
                     VLIMAIMAVVMGQMGPRFGKFQSLMDKMNSIAKENLRGIRVVKSFVQEKNQYAKFKKV
                     SNELLDLNLFIGYGFAILQPLMMFISYMAIFASLYLVSGMLKTNMEAVGGFTSFMSYL
                     MQIMFAIIMTSFMGMQASRAAISIKRISEVLDTEPAMTFKDVADEELTGKIVFDNVSF
                     TYPHDTEPTLKNISFEIEPGQMVGVVGATGAGKSTLAQLIPRLFDPQEGTVSIGGRDL
                     KEVSKNTLRDTVSIVLQKAILFSGTIADNLRQGAPGADLQRLERAAGIAQAKEFIDRL
                     DDTYESQVEERGNNFSGGQKQRMSIARGVIGEPKVLVLDDSTSALDAKSEKLVQEALN
                     HDLKGTTTVIVAQKISSVVKADKILVLDEGRLIGQGTHAELVATNDVYREIYETQKGR
                     EE"
     gene            complement(67481..67930)
                     /locus_tag="AC1PJC_000067"
     CDS             complement(67481..67930)
                     /locus_tag="AC1PJC_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HIP6619121.1"
                     /translation="MGHTIADFRNLLNQIEQISETIAKEYDVEHLAGPQGWALRFIAE
                     RSDLETFVKDIEAELKISKSVASNLVKRMEKNDFIQVLPSQFDRRYKQLVLTEKGRSK
                     ICHLKSFHEEMHHSLFRGIQKEEFDLIRQVANQLKVNIQRYKEKNHV"
BASE COUNT        19571 a        15970 c        13575 g        18927 t
ORIGIN      
        1 tttacaggca catcttcata gggcatacct agatagatag gagttccatc tatatataat
       61 tccattattc tcacctctca atagtctatt tttctatttt ttcacttgat taaccattct
      121 atcatattcc tctacactaa tctcgaaatt atttaatggc atagactctc ctctacttaa
      181 tttcccagcc aatatctgtt cttgaatatc tttaacaaaa tattgcggag ctcctccctt
      241 accaaaatga ggattcgcta aggttttctc tccgaatgcg gcatataaat cgtcagatat
      301 tacagtatac tctgtcactt gttgacgata ctcggcaata tctaaactac tatcttcact
      361 gtaataaggc tttatttgca gactttcaga tagtttcctc gaatcataac cagaccgctc
      421 gacagcttcc caagtcgtcg catagccaga ctgcattttg tttgccactt caaagtcaga
      481 ttctaagata taaattttat ctcccttatt caaacgaaca tccacatagt tatcaattcc
      541 aggatataaa ccatcacctt gccatgactg agcctttgct gtaggggaga actccagatt
      601 ggtaaacgtt acaatttcct gatctaaagg attaaaattt ccagtatttt gaacacttgt
      661 accatcttta acagtaacat tccccgtctt ctgcgacacg acatcaatcc gtgtgccctt
      721 gggtatctca acaccgccga caaagtcgcc cttgcctgcg ccgacaatgg tgccgccgta
      781 cttggacagg tcttccaaga tgttctggcg gctagacttc aaaccactct gggcagttgt
      841 atattcctgg atgcggatgt tgcctgcctc atcaaaacca atcgcatcaa ctcgtatctt
      901 ctgctcaacg ccatcaaccg tcatcttgat cgtgatgtta ttctcgacct tgctggcgat
      961 tttaccaaac tcgaccgttt gtaagtccac aaaatcctga ccctgacgag cgttgagctg
     1021 aatttggctt gggcttgaaa cttcaatgtg agaaagttgg ctttggagtc ccttaacaga
     1081 gccctctaca atgccttcaa atgctttacc tccaatgtaa tcaagagtcg cattcgctgc
     1141 atcaccctgc aaaactccgc taccccattg taaggcttcc acaccctcat ccgcatattt
     1201 agccaactta ccaatggtct gaacggttgt cggaatttgt ttacctgctc gcaaggcact
     1261 ctgacctgcc gcaaagctac cgaaagtagc caatgtcaca acagcctcag caccagccca
     1321 gatacgatct tccgtgctca actgagtacc agtaatcaag gtgttgcctg taatcgcaga
     1381 gtgggcacca tccgcaaaga ggtaagcgcc acctgcaagg gcaagtggaa gggcagcacc
     1441 tcctgtcata agagttccgg ctgaaagtgc cgctattgct agaaatttga gaccagtgtc
     1501 aacccagccc agcacttcct tgttctcctc ctgccaagta ctatttttga tttgactata
     1561 gtctgactcc agagtcggat agaactcctg aaccaactcc gcatcactct tggactccaa
     1621 ctctttgatt tgtttatccg ttagttggtc ggtctggcgg agctgctctc gaaggttctt
     1681 cactcggtct tgatataatg actgggctgc tggaattgga ctgttcgttc catcaaggat
     1741 gtctgaaaga ctgtaatgca cctgtctggt atgcgtttgg gtcacatagc cataattact
     1801 agtatagtta gtagtcgtat aagttttctc atacttcccc ttagacatat aaggattctt
     1861 actgccatta acttcgttca agctttgaaa actcttgtct aagcccttgg taaacttact
     1921 atcaatattt tggacaatat ccttgtgaat ctttccagcg cttcttaaca tgctatcgac
     1981 acggtcaaca gcctgactaa aagtagaact cggcttgctt gcacctaaac tagcctcacc
     2041 acgagagcga tagagatgag aaagaccttc cgactgcact gttgaagaga ccgaatcaat
     2101 atcccgcaac atagcgacga ctcgactctt ttgagaatct agccagtggt tctgctcaaa
     2161 atctgagcga ttcgtataaa aacgtgtcat gatccacctc ctgaagatgg tgttgacttc
     2221 ttcatctcac tctgaatata cctcaccgcc tcttctggat gttctcggat aaaccgctta
     2281 tcatccgaac tggttgaagg gctgtttaaa aactggttgg tgatatgcac agccaaggct
     2341 ctatccatgt ccaccatttt ctgatgagtc gtttctacat gacgatagag aacttctgaa
     2401 agtgtcttaa gttcttgagc tttcaacaca tagcgataga aaccatcatt tttcccagtt
     2461 gtataaatcg tatggaagga accttggctg gaaaaactag gaattgtttc gaccacttgc
     2521 tgaattgttt gcgtaatctc tgtcgccaac tctgtgatac gtaaagcatg taaaatgatt
     2581 tgttcctgag agctgagcga aatttgaatc tgttctgaca ttcttacacc tcaactttca
     2641 aatccttgat cagccgtgat tgcagtgttt cactatcaat cgagcgcatg agttctcgtg
     2701 ttaaatcata ctcataaaca ctctcttcaa tttcaagaaa gagtgtgtcg ctgtaaattg
     2761 tccctagttg ctccaccgcc aaacgaagtc cttctgaccg accatgttca accagaagac
     2821 taaaatggga tttcggcgtc caatcataca tcaaataatc tttcatctta tcatccaaat
     2881 gatgaagaat cggatgagtt tccagcaaga gccctaaaaa ccaaacactg gcaagacgct
     2941 caatgacaaa caacccctca tcaacttctt tgataagtat agaatatcgc ttaaactcat
     3001 caacagccgg tgcacagaaa taggataagt ccactctgca gtgatagggg gacgaatggt
     3061 actcttccag gtagtagcca tactccaccc ctcgctcagt caactgatta tccaccacca
     3121 attgtaactc tttcaaatcc tcaaatcctt tttctaaggt ttcctttaac aaagatttac
     3181 ggtctaagtt ttgcccattt ggaagcggaa gaaaacttaa gtcatccgaa tgatcgttca
     3241 aaagatggag ggtgtataat gcttcaattg aaaatatcat gcgccatcaa tctccttcaa
     3301 tactgttgca ctagggatgg agttcaaaag agtttccaat cccgaaaccg ttgacttgag
     3361 ctctttgata ctgtgctgat aatctttcct ataggacttg agaaactctt ttaaatcaac
     3421 ataagcagct ttactttttc cagaccagct actatcctgt gcttccagcc ctacaatctc
     3481 tgaagaaatc tgattcaggc aatcaataat ctgattcaac tgttgaataa ctccatcgat
     3541 ctgaccgtcg tcgtacacaa ttgtatcata cgtatattgg ctgtcaatac tattaatatt
     3601 tgtatccata gcacctccta ccaaacccat tcccacacgg gtttcccatc attgtacata
     3661 cttttatagt ttgcgattga agcattcaaa tttcctatct ttgcattcaa tgtctggtat
     3721 aagtcaacaa aggatgcatt tgaatccttc acgaaattcc gatagtcctt caaaaccttt
     3781 atgtcatccg ctaacttatc acgaaagttt gccagataac cgtacccacc ctgactatcg
     3841 atcctatcaa tgaccttctg acaatgctca atgtaggatt ggagaccaga taggctacgt
     3901 tgagtatgaa gattatgact cataatagta ttccttactc gtttatactt tgcaagcttt
     3961 tcacgactat tggtaataca actaagcaaa tactcatcac tcattactgt tgccctccaa
     4021 tttttgctcg ataatagact tctgttccag acttggtaag gtatcatcgg gaaggatggt
     4081 ctcaacccga gttgcgtagg cagaggcaaa accgaaaata gccacaatta tcgcaatcga
     4141 ataaaccaga aaagccctct ttagaaaggc attagaaact gagtagccct ctgtcgaata
     4201 ctgcttcagc tcaggttgtt ttttctctaa gatatttttg gaaaaaacat agggtctgac
     4261 tgcactcatc aatacagata gaaacaccat cgtcacaagt gaattgtaca tttgtgttct
     4321 tgcaccaatc gctgttatat aaaacatact tgaaaacaag acaagcccaa aaacaataaa
     4381 tagaatcaag gatacctgag catccttctt cagttgtaaa aactcttcta ctgtcatttt
     4441 ttctttttgc atcctaactc tcctattcta tttctttggt aattttcaac ttgatttgtt
     4501 ggtcttgata gtggaggtat acctcatcga tggccaactc tgcctcccgt ccaacctcgc
     4561 ttcgtgccac caccgactga ttgctcatct tcatcgcgat cagtaccgta tccaattttt
     4621 gtttaatcaa acgttgaata ccactcgaaa gcgacatgta agtcttgtta gctacaacaa
     4681 tcaagtgcaa accaacacgc tgtccctctt cgtacagaag tgcaaaatca ttatctgtca
     4741 tgccatcaac tgtcataaag gctggtaaat cactgatgat gacaaattca ttcaattgtt
     4801 ctttttgttt acgagcatgt aaaactctca ttttcaactc ttccactaca ttttcagtta
     4861 gttcagaaga agaataatat tgacccactt tcccagcaaa tcggccatat tcatctgtca
     4921 catcaaacag cgtcacagac tgcccctttc gaacatgcca aagcatattt aaaagatggc
     4981 gaactgctac taacttatgc tgttcctttt ctgtcaaaat caatagatgt tttaacttag
     5041 gaatcggcaa cgagattgtg tgtacctctt caaattctaa accaatcgga ataaaatctg
     5101 aagcgattgc tttctctgtc tccaccattt gtaaaaatgt ctgttcatca agaacctctg
     5161 gaacaatgac aataccttga ggtaatgctc catcccaatt cttagccatt tcttgggatt
     5221 catgacgtaa tgcttcgatt atctcgaggc cattctcacc tttagccggc attgctaact
     5281 gaatcaactc aggatcatcc acttgaataa gccctctacc cggcacatct tcaataacca
     5341 aagcagttct tccaacgatt gctcgcgctt cactatcatc attcattttc agggctattc
     5401 ttcgtttaaa attactatac aaattgtttt tgagtgcccc tgttcgacta gcggttagga
     5461 tcaaatagat cccaagcccc attccatctc ttgcaagagt ttgaagcaag gtatcgatca
     5521 ccacttcgac ttccgaacct ttaagaccat catagctgtc caccgcaata acaatatcag
     5581 ctaacttcct atctcctaac ttgcgataca tttcgatatt atgaacggag gaatcggtga
     5641 ataatttcct tctttctcgt atttcatctt gcagtcgttt tatcaacttc tgtaattttt
     5701 cagtctcttc aaccaagaaa tactccgcaa catgtggata atcatttaga gccaataatc
     5761 cattggtccc aaaatcgagc agataagtgt gaagacgatc tggattgttt tgtcggaaca
     5821 aatcaaccaa taccgtttga acaaaggtcg atttccccat acccggacta gagaagaggg
     5881 cgatgtgtcc atccttttca aagtcatgtt ccaagacttc ttggctctgg cgactcggta
     5941 tatccaccat ccccaagcgt gcaaccaaac cacttgcctg tccccacaag tccttgaaac
     6001 cttgtggtcg tagatcttgc aggaagattt ccttagacag cggaggcaac catggttgcg
     6061 gcagggcctg gatggacagg cgctctgtca aggctttcag cttacttacg atggcttgaa
     6121 gctcactcgg aacctccttg atggattcag cctgatccag acctgacagg tcttcgttga
     6181 gaatctcata ttgaccaatg tcattgatgg catagatggt atggtcctca atcccctgct
     6241 catccttatc tggctggtaa tcagccccag accaggcaga ctggaagagt tcatacactt
     6301 cattgtttcc gacctggagg tagccacgac ccacctgagt aatctcagct gcatctggcg
     6361 tcttaagcat ctccatggag tcgctccgat ccgccacctt gagcgccagc ttgaagcggg
     6421 agttggacca gatctggtca tccaccacac cagatggctt ctgagtggct aagatcaggt
     6481 gaatacccaa actccgaccg atacgagcgg ttgagaccag ctccttcatg aagtcaggtt
     6541 ggttggtctt gagctccgca aactcatcgg agatcaagaa gagatgaggc ataggctcac
     6601 tcacctcacc cagcttgtac ttcttctggt attgattaat atggttgaca tcattctccg
     6661 caaagagacg ttgacggcgc ttcagctccg cattgatgga cactagggcc cgcatggact
     6721 gggcgccatc caagttggta atagtcccaa gtaagtgagg caggtccttg aagaggttgg
     6781 ccatgccccc acccttatag tcgatgagga gaaaggcaac atcatgcgga tggaaattaa
     6841 ccgcaaggct taagatataa gactggatga cctctgactt accagaaccc gtagtacctg
     6901 ccaccaaacc gtgcggaccg tgagcctttt catgtaagtt cagatagacg atatcctcct
     6961 tgccacgaag gcccagaggc accgccaaac tcttataagg cgcatgcttt tcccaacgac
     7021 tgacaacacc caagtcctca aaggtctcag ccccgtacat ctccataaag gtcaccgttt
     7081 ctgggataga agacttaagg ttctgtaggt gattaagcgg agctaaacgg cgtaccaagg
     7141 tctccttgtc gtagccaacc gggaaatggt ccaaggcaaa gtcaatctca cgcaactgac
     7201 cctcctccat gaccagctga ccagtgtttc gatccttgat gttaatgatg gtcttgatat
     7261 tctcagacag agaagacagc acatcctgca caaagaccag gctacagccc agctcagtcg
     7321 gatcctccgt gaagaactcc ataatcacat ggtccaaaat caacttctca tccgtcacca
     7381 aaaccacata gtgagggctg aagagggtcg actcccgatt ggacttgtct tccttttgag
     7441 ccctgcgcaa tttcaaaatc tgattgagcg agttgagcac ctgatcatgg gtcctctggt
     7501 tatagacgaa gccacgcaca ttcatgtcct gcaaggtcgc atgaggcaag aaccgcatcc
     7561 aatcccactg ctccttctcc tcctctggca tgatggtaat aaactgcaca tcatgatagg
     7621 aatggaaaag cgctatttgg ttgaccatga gttggagctg ctcaatcacc aaagcccgcg
     7681 gaccaatata gccgacagga ccatgggaca gattggccac aataggcata tctgaaatgg
     7741 tcttgttttg ttcatagagt tgaaaaccct ccaactccaa gggatcccgc ttgcccgacc
     7801 gttccgtctg agcataggac aggtcataag acaccggaac ctcacccaga cccaagcgat
     7861 aatacaagaa atcaaaatga agaggcgtct tctcatagat ccgatggtgg tagctatctg
     7921 ccagatctac caaggtctca atagcaggat aatggtagag ctgaccatct ttctgcgact
     7981 tggtcagacc agccaactcc ttggccttat cagccagata gtcatgatag agcccctctc
     8041 ggtctctcag ctctttctgg taatcctttc tcccctttat atagccagca atagacatcc
     8101 ctaacgtcac aatcgacatg gcgatagtcg caagcacata gagaccacga ggttggaaaa
     8161 tcatgataac caatgtaatc cccaccatca taagaggagg caagattagt ttcaacaaac
     8221 tgtcggacgg ttttgaaggt gcattcgaag gcgcattgat agccaccctg tcttctgaac
     8281 ttcgatagat aatccgtgga gagcgatggt agtctggata atcctcataa aaagcatagc
     8341 gcgatgcaga cttacgagcc aactcatcac tagcctctac aggacccgca accaggacct
     8401 catctgcata aaatttgaaa aaagtatcct caaaagcaag ctcatctcca agagccagct
     8461 ccatttccca cttctccatc agaaggttat tgatatagat ggagcccgcc aaacgataaa
     8521 gcatccatga ctggtcactg cgtttgagca agacatggca acttgaccct gcaaggacaa
     8581 aactatttcc cgcatgctgg ccgatcgtta attcctgctt atcaagaggg tctaggatca
     8641 cctgctccga cggaagaaga tagaccactc cccccgccaa agacatacca gatacaaggt
     8701 ttccttccac tccatcatag tcatagcaaa cttgtactcc atctaaccaa atcgtcaaag
     8761 gagcatccag tgaggagaca aaaacctgtg ccttttctgt gccttgaaaa agaatctttt
     8821 tcccagcaga cacatccgcc acatagcgaa aaccatcttt ataaaaaact actgtctctg
     8881 ccatagctta ctccccgccc gagctcgatg gactcgttga tgatgactct gtagaagagg
     8941 ttgaactaga cgtcgaactt gtacctgttt ccacctgtga cccatcttca ttcaaaatcg
     9001 tagttcgggt atcccaatac ttttgatact ccgctttcaa ctcatccaag gttgtttccc
     9061 gctcttctcc cgacaaagtc gtattttcac gaacctgttc catttgctgg taaagagcat
     9121 acaaaatcag atccgaatca tccaaacgct tggccaaatc caaagcttct tggctattac
     9181 cacgaccgat ttcaatccag tagtccaagt attgctcatc tgatttgagc gttacattat
     9241 ttaagataac agaacgctgt tcattactca aatcaaaccc ttggatgtag gcataagcaa
     9301 gagtatattt ttgagtgtag ggaagactag aaacttctac cctctccaac tcactaatca
     9361 ctccaggata gtccaccttg atgaaggccg tatccgcatc cagcattttt tccttgaaag
     9421 gattgtgcat gaaaactaga taaatcagtg gcaagaccaa taatcctgcc agggcagaaa
     9481 gccagatggt cgcatagcga tagagacggt gcttagagcg agaaaccctt gtcaaagtcg
     9541 ccttctcctc ctccaactta tcctgaaaat agccctgcaa aagtccttcc aaactatcca
     9601 tatcctctgc cttgcgaatg gtatctaaga actctggtac aggaaccaca tccagcgcgc
     9661 cattgtaaag gtccataaaa tcatgctctg taaataaggc aaggatataa gattttaatt
     9721 gcttcaataa atccgcagca tccaaggtct gaggcaccat cttctccggg atagcccgat
     9781 aggctatttt ggcccgacca tccttagtaa taaagacaga tgacggatgc acgaaaaagg
     9841 tgattggcaa tttcaaagcc tgcttcaatt ctaaaacatt gagagaaagt cgtagttttt
     9901 cagaaacctc tttctccttc atatcctcaa aggtttgccc aaatgcatcc agatgatagg
     9961 tgaaatgaac tgtatcttca tccaccgtca tttcctgttg taaaaattga gggtggtgca
    10021 gatccaacaa gagcaggtca gatagctctt gcgttgccac atcagaccgt tttacatcaa
    10081 ggtgccactc tttatcaccc tttaaaaaga caaattcctg tccaccaaag acaaatgttt
    10141 cttctttcac cctaaacctc caaaacctct acaatatctc ccgttgtcac aggataatcg
    10201 gctaatactt tcccttcgtc caaaatgaac cccttattaa caacatggag ttggtatttt
    10261 tttctagcat tctctttttc gaagatgcca tccaactcct tgattaatct cctaacctca
    10321 atgtgagtcg gaatccgtaa gtccctgatt cgtcctccat catgtaaggt aacattgata
    10381 tgcgtctcca tctcatctcc tccaatagac cactagaaga ttattccagg cctacttcat
    10441 ccttacccat caaataggtt gctaaacttg caagcaatag aatgccaact acaatagaag
    10501 caaaaaacag gccagagaga agccctgctg gagccccctc tgtcccacta tctaccttgg
    10561 ttgtcatcac cttatgggtc cgagtatcaa acaaggtccc cacttgcaaa atatccgtgc
    10621 ttggtttctc accagtttgg aataggctat ttagctgatg ctgtaataat acttgatcag
    10681 cttctttttt ggcagtcaat tctgcttgat ctggtgccag aaacaaagat tggaccagta
    10741 aatcctgact acctattttc ttttcttttt ctacttcaat gcgtgaacta tcaatttgaa
    10801 gactattgtc tccaagttcg gacgcttcta tcccaaccgg aagaaagaga accaggcaac
    10861 taagaacaag tgctatcttt ttcatttaat cctctttttt atttaggaat ttttccacat
    10921 caacaaaagc attcaaagcc gcaaaaccaa gccccaatac gagcgccgta gcaatcactg
    10981 tcagactggc agcttcgcca tcaaagtaac cagataaact attttctaaa acagaaagag
    11041 ggttgatggc tttcagtgtt gcaggcaggc ctgtcaaact agcagttgta ccaatggcat
    11101 tggataggta aataaagctg ataaccatga agaagctaat ccccatgcca agtcctttag
    11161 cattttttat caatagatac tgaccttgtg ctagtaatag gctaaacaag gtaatcatca
    11221 gcacccaagt cgggatcaac tcgctatcaa tctgcaactg ttgacttgat acaaccccga
    11281 tcaatccacc gaccagaagt gatagaacgc taagcacagt caccgttact aaatctgtat
    11341 cctctagacg actgacttta aacttatctt tcacagcctt aatcacacga tgagtaccaa
    11401 aaacataagc tgcaaacagg gccaccatct ccaagagtaa aatccaggtg aaaggtctgt
    11461 aggtgttgac tgttgctttt acagatgaag acgattctgt caatggcgca gacaagaaat
    11521 ccaaaatcac ttcatttgga acaccattgt cataggtatt gcttaagaca gaagtaaagg
    11581 tttttacaaa gtcgccattt tcagccaatt ctgattcaaa cctctccatc agggcagttg
    11641 cttcagaaga tagattctct ccgctttctt gagcagcctg tacatcatta gtaaatgtag
    11701 tgaagacggt attgacatta gtcgcctcct caacgttctg ttctgaaagt gattttacct
    11761 cacctgtaat agaaagggaa gcatccaatt cagtagcgag cgctgcaagt tctgtatcat
    11821 gcgttccttg aagagcagtt tgttgctctt gaccatctgc aatagactga gctcgtgcct
    11881 tgacatcctc caaaaatgcc agctgattcg ctatctgttg agccaaatca ctatttgtcg
    11941 tgctgatata ttggagttga tcttttaatt cttgtttgcg tccttctaac tcagccaatc
    12001 tttccttcaa agcttgatct tgtgcacgcg cttcagaata ggattgtaaa ttagctgtaa
    12061 tggagctcgt aactaaagag gtcaacaggg atttcgcgtc ttggttgaag aaactatccg
    12121 tcaaactgct acgttcacca gttacagtat taacaggata atattgatct aataaacgat
    12181 tagcttgatt atacttggaa atgatttcac taacttttgc agcataagca acctctgctt
    12241 tacgataagc ttcctgttct tttaagaagt tttcccaatc aaatcctgct gttgtgactt
    12301 ccagattatt aacacttacc ttgacactcc cctgcgccat ctcagttgtc gtgacaggtg
    12361 taccagtgga cggtgccgta gtcgatacag tattctcctc cgatgagctc gaacccgtcg
    12421 ttgacgaagt tgaagttgaa tccgttacta ccgttgttga aaccgtggtc gtctgactct
    12481 tttcatattg gagagtgacg gttactgtat tatccttttg caaagcaaca acttcactag
    12541 gattggtata gctgttgcca ttcaattccc aagataccaa atcaaacccg ctaggaattt
    12601 ctaaggaaag agtggcacga gttgttggag taggaatttt aaaatcagca gcagcttgaa
    12661 gatgcggttc taactcttta gcaagatcct gtaattcttt caaatcatta gaagctacaa
    12721 agtgttcacc aaaatgcgct tgcgcaaatg ctgcgtcaaa ttgaatctga ctcgttgcct
    12781 ttggatccaa tttgtttaaa tcagtagtca gatctgcagg agtcaagctt ggtaaacctg
    12841 ccaattgatt caaaatcaac tggtctaagc tcgtttgata ggatgctaga gaaatcggca
    12901 actctgtact cttacccaaa accgctccaa tgtggattgt ttccagacta tcgccatagt
    12961 aagtggtcaa atgtgtttca gcaaagtcag aaatcgcagc ctcatgctct gctaatttcg
    13021 tactctcagc ttcaattgct acctgtaaat cggcaatggc ttgatccaac ttttcaacca
    13081 aaccaatata gccactagct tcacccgtct cgtctatcgc tgccgccccc aactgccccg
    13141 agagcacctc ttgggtcgtt ttaatcgttg caaacaactg atccgtttca gcactgagta
    13201 cagagctatt cattgctaaa agcgaagctg aaaattcttc ctgtgatagt tttccctgat
    13261 ttcgttgttc aatcaaggta gccaaattat cttttagtcc cgtctgagca gtatttaggc
    13321 tatcatatgc cgtcacgttg ccagaaagcg cttctttcaa aagattatta gctgccaatg
    13381 ttgaatcagc cgtcgaagtc aaattcggaa aaagtgtctt aaaatcaaca gctgtttgat
    13441 agagattgtt cctaaaaaca gcaatattgg tcacctttgt atctgacaag gtctgaacat
    13501 ttcgttgtgc ctgataaaga ttcccgagaa tgctggccat atacatatca atcagctgac
    13561 tctgtaggtc tgcaataatt ccttttgcca ccttaacagc ttcattctct acctgcaaat
    13621 taccatttgc attaatctta tacgtgattg tcgctttatc aacattggta ttgttgatat
    13681 ccaagatttt tgttgaaaaa tcgcttggaa tggtcaccac caactggtaa aggccttctt
    13741 ttaacccctt gtcagccgta ccacgactga cagttgacca gttatgggca gtattttttt
    13801 cgatattttt tgcataacta gcgccaagat tatattccgt accatttagg gttacagtat
    13861 tatcttcatt gaccaaggca acatccagct taatattttg ttgcccagct tcttgctctt
    13921 tcttggaaat actcgtattg ttctgaacgg caatatttaa tccaatgata gatagaagca
    13981 aaagtaagac cagcaaagca tttctcccat acttcaaaat gcgctgttta tccatttttc
    14041 tctccttcat ctcgataaaa aataggaagg ctggcgcctt cctagcattt gaacttcgtc
    14101 aacccttagc cattgatttg cgctgcaatg tctgcatctg tttgctcgat aatgtcagca
    14161 actttattca attgggcatt gatatctcga agcaactcag aaaattcaac aatttttggc
    14221 ttaagcgctt caaattgagc atcaaaactg tcaaaagctg taccttccca gttttcacga
    14281 ataacagatt gctcatttga caaagatgat aaaatagcat caatgttatc tgaaccttct
    14341 gtatagcgaa tcgcagaagt acggagctca tctggggtta atttaatacg tgacatatcg
    14401 ttctcctttt gtcttataat tactagtcca ttatataata aaaaagtaaa taatacaacc
    14461 atatatgcaa ctttatttat agaaaaaata attatttagt caggtcaaaa cataattgta
    14521 aaaattttat actattttga ccgcagagca aaaaagattg aaggaatatg tccgaaacgg
    14581 accttcctcc aatctgagct gaaaattcag ttttttaatg cacgaataat ctaaatagag
    14641 actagcttag ttctctttga gcacaggttg gtaaatgtta ctcaaaaata tttcccaatt
    14701 ctacatcaac tcggttttcc ttgacattga tgtcggtcac agcgagcaaa gatttgtagt
    14761 tagctacgct acggtcccct ttttggtttt ccgcaaagac agccacacct accaaggttg
    14821 agtcaaactc agacaaaagg ctaatcatac cattgatggt gccaccattt ttcaagaaat
    14881 catcgacgat caagacacgg cttcctgcct tcaaactacg cttagacagg aacatctttt
    14941 cgatacggtc gctagatcct gacacatagt tgacagaaac ggttgaacct tctgtgattt
    15001 tcaaatcacg acgcacaata acaaacggta cattaaggac attggcaaca gcattggcca
    15061 aagggacacc cttagtcgca actgtcatga ccgcatcaat cttttcatct ttgaaagcat
    15121 ctgcaatgat acgaccgaca tttttcaaaa tatgcggtgt agacagcaag tcagatgaat
    15181 agatataacc gcctggcaag atacgattac tttcagccat ctgatcacga agggcctgtg
    15241 caatttcgac agactctgcc ttagagatcg atggagtaaa aacaactcct ccactggcac
    15301 cagtaatggt ttcaatatgc ccgatagagc tttcctcaaa agccttttta atgatggcaa
    15361 tatcctctga gatagatgac ttggcagatt catacttttc cgcaaaggta ttcaaactag
    15421 ttaattcata agggtggttg atgaggtaat tggaaatgac aaccatacgc tcacttcttc
    15481 ttaatttcat aaaatcatcc tctttcactt ttttatatta tatcacaaca aactacaaaa
    15541 agcgaacttt tttgattaaa aagtccgtct ttttcgtatt ttgtttatcg cttacatata
    15601 ccactttgga agatgatgat taaaacattc ataccattca gaaatcttct gcgcttgcaa
    15661 cttcatcaat ggaatttgtt cggaatctac ttgttctgcc caagaaagag cgcctagact
    15721 atttactgtt acataaagag ccatgagttt ccaaaattcc tctggaatag cgccgtcaaa
    15781 ataggcatct acctgaccac gcgcaaaggc tggagacaaa tctgccgtga aaatcaaacg
    15841 gttgaattct tcccaagggt ctcctatatc gtagcgatca aagtctaata ttttcagttt
    15901 cccatccgca cccagtagga agttacctgt gtgaaaatct ccatgatggt aggcaatcgg
    15961 tctcccttca agcaagtgac gattggcctg aacaaagtct atcatggctt gaccatttgg
    16021 ataggaatga ctagctgctt ggtagacagc taatttattg tcaatcttag cctgataaaa
    16081 actgttccag tcgcgttgac tttggtcaat cggtagggca tgcaaggttc gcaaaaactg
    16141 ccctgactga caacccaatt catacaagac agaatcaggc agatcagaag ccacttcatt
    16201 catatcctga ccttccatcc attcataaag ggtgtagact gacaagtcat ccgcccaaaa
    16261 ggcgagtggc tctgccacag gcaaacctag accaaacagg ttttcaacta actgaaactc
    16321 taattgctta gcctcatagg ctggccgctc tgctattctc aaaagaccaa agcgaccatc
    16381 ttctagctgg accttgtact ttcggtccgt ggaccagcct ttggtgaggg gttgtcgaga
    16441 cactatccta actgccatca gtcgatgttg ggcttataga aggcgcggtt gtccatggca
    16501 aagatgcggt tagtcatctc gcctgggccg accttgtcca aggctgatag catcatcatc
    16561 atttccgcat cgatgttgtc aatcatgtgg aggatttccg cctccataat ctgcggacgg
    16621 acaggactgc catactccaa gagaccgtgg tggctgagga taacgtggcg cagaacagtc
    16681 acttcctcca gactgtcatc gatgcccaat tccatcaaga ccttggtaat ctcttcatca
    16741 atcaaggaaa tgtgcccaat cagattgcca cggacagtgt agccagtgtt atcaggtcct
    16801 gtcagttcaa tcaccttggc taggtcatga agcatgattc ctgcaaagag caggctcttg
    16861 ttgagctgag gataaatatc accaatttta tcagccaatc gtaccatggt cgctgtatgg
    16921 aaggacaagc ctgagtagaa ggcatggtga ttggtcttgg ctgctggata ggaataaaat
    16981 tccttgtcgt acttgctgta gagagcacgg acaatccgct gccaagtggc attttcgatg
    17041 cgaaaaatca tctggctcag atagtccttg gtgtccttga catcaacagg tggcttttcc
    17101 ttgaaatcag cagggtcatt gggctcgcct gcctttggca aacgaagaac aagctggttg
    17161 acctgaggtg tgttgttgta aacctcacga cgaccctgca tgtgaacaac tgtcccagca
    17221 gtaaagtctt tgattttccc tggttgggca tcccagacct tgccttcaat ctcgccagta
    17281 tcatcttgga aggtcagagc taggtagtct ttgccagctc gtgtttgacg gacttctgct
    17341 gacttgatta gatagaatcc ttcgaagaat tcatcttttt tcatttggtt aattttcatt
    17401 atcttcctca tctaatgggg acaggccaag cagtcccttg gtttggtcat cttcgtatag
    17461 gtcaatggta cgaagactac gctcgatagc gttggtgcga gtggttagga gtttgtcaat
    17521 attgctgctg gcttgattga gttgtttctg agccttaagc aagaggtcag aaaacttgcc
    17581 aaattccagc ttgacattgc ccaagacctt ggaaatatca tcagctgacc gttgaatatt
    17641 gagggtttta aagccgacag agagcgaatt aagcagggca gaaagggtgg tcggtcctgc
    17701 taccacgata ttttcctgac gacgaaggtc atcaaagaaa attggattgc ggaccacctc
    17761 tgaataaagc ccttcggttg gcaagaacaa cacaccaaaa ttagtcgttt caggtggatt
    17821 gaggtacttg ctctgaatgt ccttggcaaa acgtttaata gcagccaaga gatttttccg
    17881 atggaggtca atctggtcct tatccccact ttcgtaagca tcttccaagc ggtagtaatc
    17941 cgccagcgga aacttggaat cgattggcaa gtagatatag tcgccttccg tccgtcctgg
    18001 taacttgacc gcatactcca cgcgctcact agagcctgaa accgtggcaa gctctcgttc
    18061 atattggcta ggtgtcaaaa tatcctcgat aatctgtccc agctgcaatt cacccatgat
    18121 gccacgggtt ttggtgccag acagcacctt gttaagacta cccacatcac gcgccaccgt
    18181 ctgcatttcg cccagaccac gattgaccga ttccaactgc ttggacaccg tttcaaagga
    18241 ggcttgtagg cgggtttgca gggttttctc cagcttttcc tcaaccgtct gccgcatttc
    18301 ttccaggcgt ttttcatttg actcctgaat ggcctgcaaa cggcggtcgg tggcatctcg
    18361 attttccaag tggctcttat tcagctcttg acggatgtct gttagctgtt ggtaaagctc
    18421 cgtgcggagt ctttccactt cctggtgaat ggtctgctgc tgtttgagag ttgcattttc
    18481 tagttgatag ctgagctgat cagacaagtt gtctgctgta tcttcggctt gatcttgcaa
    18541 aagcagggcc aagctctgcc attttccata aagaaaaacc aaggccacca agaccagtat
    18601 cagcaaaata agtaatacaa tatccatcta atccctgtcc ttactgtaga tcaggaccac
    18661 gtagccctga tctagttgaa tgtctatgtc cctatctata aattcgttag aagcatagca
    18721 ttttttgaaa aaatagttgc tggcatccag cgggtacttg gcatgacgaa tggtcaagcg
    18781 gctaccatct tctggcataa aggaaatata cttcatacca gcaatcggtg acaaacggtg
    18841 ctgacctgca ggtcgaaaac ggatgatgtt ctgttgatct accaattcaa tctgctccgt
    18901 aaaggcagcc aagtctggct cagcaggcaa gaagagattg gccatcatgt ggtccatgcg
    18961 accacccaag gctccgtata tgcgaacctg ggcctgcgga taggccttga agatttcctt
    19021 taaagccagc tccaaatctg tatcatcttt ttcagcagga gcttgcaaaa aacgctctgc
    19081 tagatccgtt atccgcccta attcttcagg tgtcaccgag tcaaaatcac cgatagccca
    19141 gtcaagaggc agggaatggt ccagaagacg aagagagcct gcatctaccc ccacatagag
    19201 gtcggcaggc tcaggaaggc agtcaaagga accgcctgca atgacagcaa tcttaagcat
    19261 tgagggcagc tctcaatttg gcaacgttgg catccaagtc tcctttgaag agataggaac
    19321 cagccacaaa gacattggca cccgcatttt tggctgaatg aatggtcttg tcatcaattc
    19381 cgccgtccac ttcgatgtca aaggtcaagc ctttggcttc acgaagtttg accaaggcct
    19441 caatcttctc agctacttct ggaatgtagg cctgaccacc aaaacctggg ttgaccgtca
    19501 tgagaagcac ctgatccacc aagttaagca caggctcaat ggtcacaaga ggtgtacctg
    19561 gattgatgac cacgcccacc ttcataccag cagcacggat tttttggagg gtcccatgca
    19621 agtgaaccgt tgcttctgca tgaatggtta aaatatctgc acccgcacgt gcaaaggtct
    19681 caatatgatt ttcaggattg gacaccatga gatggcaatc gaaaaccagc ttgctatgag
    19741 gacgcatagc cgcaaccaca tccgccccaa agctaatatt tggcacaaaa tgaccgtcca
    19801 tgacatcaat gtgcacatac tccacacctg tcttttctag acgcttgagc tctttttcaa
    19861 aatttgcata atctgccgcc aaaatagacg gtgcaatctt ataatgtgac atagagtacc
    19921 aactttctat ttgaatttct tactaacctt ggtataggtt tcacgttgat tttggatttc
    19981 gctgaggaat tggaggtaat tatcaaagcg actttgggaa atggcagagc tggcaacagc
    20041 ttccttgact gcacaatccg gctcgtgtgt gtgggtacag gtcctaaatt tgcagtcctg
    20101 actgctttcc gcaatctctg ggaaacaatc tgtcagagcc tccgcctcct tgacttcata
    20161 gtctagggat gaaaaaccgg gcgtatccgc aattttccca ccgaagacat tgtagaaact
    20221 gaccgcacga gtggtatggc gaccacgccc cagactatct gaaatagccc ctgtttccaa
    20281 ggctaattct ggcgcaatgc gattgagaag agtcgatttg ccaacccctg tctgccccat
    20341 aaagaccgtc accttatcct gcaataatgg cgtcagttcc tccaaactat agacaaaagg
    20401 atagccaatt ttctcataga tagccttgaa agcatccatc tccgcccaat cttccaccaa
    20461 gtccatctta gagatataga taataggatc catatccttc tgttcaagga gaactaggaa
    20521 acgatccagt agattggcat taaaatcagg ttccttggcc gacatgataa ccaccgcctg
    20581 atcgatattg acgatagggg ggcgaaccaa actatttttc cgctcatgaa tctttaaaat
    20641 atagccttct gaattttcct cagcagaaaa gtccacaaaa tcacccacgt agggcgtttg
    20701 gcctttctta cgaaaatttc ctctagctct ggtttgataa atctgtccat ccgcctcgac
    20761 atagtaaaaa ccagccaagg ccttgataat tcttccttgc aatgaagact cctttgtgtg
    20821 tacttgttcc tattatacca aatttcctac aaaaaaaccg caagcggttt cgattttaca
    20881 ctttcctcta gtcatttcaa tgtaaaaata gtataataaa aagcaagcgg aggtggtgga
    20941 acggcagaca cgcatgcttc aggcgcatgt gcccatcggg tgtgagggtt caaatccctt
    21001 cctccgcatt atttataaag gataacccca agtcaaagtt gatgacttgg ggcattttta
    21061 tatcttctca cgcatactca acgaaaatca aaatcagact aactccaaag gtttggggaa
    21121 ccttgggagg ttggaggtag agtgaacgta gttcgtttct acttacgcag atagaaccct
    21181 gttactattt tatttcaagg taacaggctg aaaggctcca ctggatcctt tcactcatca
    21241 aatcaagtca acaacgcctg atttttattt tcgaagagta ttaattgctc tccccaatcc
    21301 gtaccacccc atcatagcga gaaaggacct catcggacac acggtgggaa atatgaatga
    21361 gcgtcttatc tgctagtgag gtaaggtagg cttcaattac tgtataggtt tcctgatcca
    21421 aggcagacag actttcatcc agcaacaaga tgtccttatc ttgtagcaag gcacgaatca
    21481 agagcaggcg ttgcttttgt ccgccagaca gtccgctatc atcactaatt tcctcgctca
    21541 aagaagcata acttggaaaa cgactgtcaa ggttcatggt cttaatgaga aacatcagcc
    21601 tatcttctga aacaacctgt cccatggtca agttgtaaag tacagtatca tggaaaaggg
    21661 ctccctcttg tggcagatag gcaatcttgt cttgaatggc ttggtaagac aagtctgcaa
    21721 gagaggtttt atcaaagtaa atatctcctg cttgcagttg gctattcttg gtcaaaataa
    21781 gagccaagga agatttgcca gaaccacttt ccccaagaat caggtacttc ttgccacgct
    21841 caaacgctac tgtcaggtct tcaaagacct gcttatcacc gatggcataa ctagccttga
    21901 ccagttgcat gctctggaaa gctgaagcta gttcctgtcc cttcgtttct tgccccaaag
    21961 tagatagctc aaactcttgc ttcaattcct taacggcatg cctgtccaaa aaggctgccg
    22021 caatgctatt aatgggatcc accaactgct ctgaaatagt cagaatagct gtcaagccac
    22081 cgatggtcaa ggcgccagag aagacctgaa aaccaccgat aaagataatc gaaagagtgg
    22141 tcagataaaa gacgaaaccg actaagagcc gcatggttac tgtcgttcga ttggcctgat
    22201 caaccttgtc attgactgct tgatagcgat cgttcagccc atctaaaacc tgctgtcttt
    22261 ggcggctatt tttcacttgc aaataaccta gaaagacatc tgaaaccctt gtattataga
    22321 cctgctgact gtccgaaatc gcctcctgat tgagccttct ccgcttttta aacaaatagg
    22381 gaatcacaac tggcaagaat gagatcagaa tcaagaaaat agcggtcaga ccatccaagc
    22441 taagaagggc caaactggca ataccaaagg tacaagcacc ttgaaaaatc gtaaagaaag
    22501 cgtcgtaata atcttctttc accgtctcca aatcattatt gagctgggaa atataggccc
    22561 ccgccccctg ctcaacgaac tctctaaaag gcaaatcaaa aattttccca ataaaggtcg
    22621 cctgtaattg gaaacctact tgattgagat agctgacatt ggcaatctga cgaatgtatt
    22681 caaagaccag catgacaagg acagttagcc ccatcagcac aaaataagac acaaaagcct
    22741 gtctatctcc agccgcaata gcatcaataa tatagcgata ttggtacaga aagccaacat
    22801 tgagcagggc tactgcaaaa atacaagata aggttagcca aaaattcctc tttttcattt
    22861 ctcctccacc attgaataga tttttaagta aaacaataaa aaatctgtat taaacaaagt
    22921 tattatacca caactcgcca tgtttgtgtc ctttttcaca taaagaagaa accaagccag
    22981 ctatctgact tggtctattt ttattctgtc gtttcagtcg ctactttgaa aaaatctttg
    23041 tatttcaaaa ggtagccttt tcctgtggat aggtcatatt ggaccagttt gagttcttct
    23101 gcaactttcg catcccgctc agcctgtcct actcggtcct tatgaagcac ttctgtcaag
    23161 agggcatagt aaggactgac cttattattg gtcgtctcca gcatcagtgc attcatgtcg
    23221 ctagaattga ccaaatcata atggtagtct tctgtttcaa aattactcca cacgaaataa
    23281 tctgtcttgt actgcgcgct tgggtccgtc acgaaagcag actctggata caaacctggt
    23341 aggtggtccc cgtaaaaaac aactgtcact ttcttatcca aggtcttaag ctggtctaga
    23401 aaatcccttg ttgcctgatc cgtaaaggat aggaggcgaa catagctggt caagttttca
    23461 ttttcctcag ccgtgaagcc ctcacccgaa gctgttatac ctgcaggctc tagagaattc
    23521 cactgaacat ggttctgcat ggtaatagca gagacaaatg tatttgttcc tgaacgtacc
    23581 tgctccaaaa tcaagtcata ggtcttcttg tcactgacaa aattcccctg ataatcctca
    23641 ggcgtcacag caagaggata cttggcgcta ttgagagtgt aaaattgctc aatccctaat
    23701 tgcttataga tcgaatttcg attataactg gtatcgtagt agggatggat ggcgacacga
    23761 ttatctgctg gatagaggtc actgatactt ggcaacttct tcatattcgg cgccacatcc
    23821 agatagactg acgaaatgga cgagttgtaa ttgtagaagg gcagaccact gtagacctga
    23881 aactcgatgt tagctgtacc accgccatag tggtcactct tcatcaagcc actggtagtc
    23941 tgactcatga tgtactcgat atttggaagg acattttgac taagggtcac gcctggaatc
    24001 cgacgcggat cagccaaact ctcactaaga atatagataa ccgtctggtc agtcaattga
    24061 cctgtccgtt tcgcattgat tttctcggcc agagcggtat atttcttcac aatcgccttc
    24121 atagtttttt cagagtaatt ctcaggcttt tccatactgg tcttgctgag ctgttgcaac
    24181 cagaggaagg aaagtgtgcg gtaacgagct acaaaggcat aacccttcca gtctacgtta
    24241 cgccagttat tgacctgaga aagaatagga atccagccaa caatcttatg gtctttctcg
    24301 ttgcgaatag cccaacccat tcccaaaatc aaggacacaa tgactgaaat tcctgccaac
    24361 cgtttccaga tagatttgac aatctgtcct tggaagtact tcttatgaat tcgcctgtaa
    24421 acaaagaata ggatgaccaa aaagacaagc gatatcaaaa caacccgcag actgataaag
    24481 ctgagaatca tccccatgtt tccaatccat ttgaaatcgt tgggggtcat tggttccgaa
    24541 cggtagcgga atttgagaaa attggccgca atcaaggtca catttaaact agcaatgatg
    24601 gcaaccgata agatttgacg gttgataact aagctaatga tgacattgag gaaaaagagg
    24661 caggcaatct gaaagacaat ggctcctgga aagaggtggc gagtgaaata agagcccgtt
    24721 cccccagcca tagaagcctg ataaccaata tgcgatagcg tagccagtgc caagctgata
    24781 aagagcatac tgtggacatt ggtccgattg gccttaaact ctacaaatgc cttatgaaga
    24841 tagcgaagaa aaatgtaggt ccctataaaa tgaatggatg caaacaaggg tgtctgacta
    24901 aaaaattcca cataggagcc attttcaacc aaactctcat aatggctatc tttccaataa
    24961 gatatagcta gtggactgag agaaagcaag ctggtcaaga gcaaatagct atcaggcacc
    25021 agatgactgg ccgaccactt gcttaattta tctcgaatgc gaccattctt ccgccacaaa
    25081 aatgccaaca atactggaag aagcaacatc aatagaagtt caaactgaaa gagattatta
    25141 cggaaaatat tccagggttg atacttcttg gcattgattc gatagactag attgacaaga
    25201 tatagaaaac ctagaaaata gcagacatac ttggcaaagg ttttggtctt tacaaacttc
    25261 tcatatttat taagcaagac caatacataa aaggtaaaaa taagataggc aagcaaggtc
    25321 agagggacaa accagagcgg aaaagataca ccgcttagca agagggcccg tcccatcgcc
    25381 agcaaaacag tcatgaccat gaccagaatg aattgcttgc atgccttggg attgatttgt
    25441 ttcataacat ttctctctta ggaaagattt gattttcggt aggcaaaaac atagtaaagc
    25501 aaccagagta gccatccagt caaactgata atgataactg gccataacca ccactgttgc
    25561 ttgtaggata ggataagagt attctgccct tttttgctgg taacccttgg cacaccgata
    25621 gtggaaagtt ccaattcttc tctatccaag acctgttcat tcaaaacgag ctgactatct
    25681 tggtagacaa tgattggcac agctgtttct tctgcttcag acgccgtcca agtcaccacc
    25741 agctgatcac catcaactgc tttggtaaag tcttgatttg gcaaaatcac ttggtcacga
    25801 taggtaaaat aggtattgtc cgactcttca ttggtcatat gttccgttct atctgacaag
    25861 tctggtacgt agtctggcgt tgatttctga gcaatgtgga taaattcgcc caagtcttta
    25921 gaatggaaag aagcccgtaa ctcttccgtt gtaccataca gagtcgtatg aatgcgtttt
    25981 tgcaggaagg tatcgctata gtaatgccca ttgatttcct tataactctg attccagagg
    26041 aaaccaaccg aaacaagcaa ggaggcaaga gccacacctg aaaagatttt ctgcagtttg
    26101 tcagacaagc cagacacctg gactcctaca actgccagta aaagagcatt ggcgtagagg
    26161 aaaaatcgga agggaaattg aatcaactcg acaagtgtaa ttcctttccc tgcaaacaac
    26221 tgccaaggga agaggttggt tgacaaaatc aaaaatactg cataggtcaa agcaagacca
    26281 gccagaacca gcgattgttt cttccaattt ttcaccaaga aatagagata gattccgaag
    26341 aaaataggaa gcggatatgg ataaacgaga aagtaaacct tgagccaatt cactgtattt
    26401 aggacaaatt ttttgttaac aaatggtggt accaaagtgt tggtcgcgtt gatataaata
    26461 agtggcaacc agatgttgat ggtcagaagc aaaaaaattc ctaccgatag agctacttgc
    26521 ccaataatct tcattttttg gtctgatttc caccaaccaa taaggaagag tacaccatag
    26581 gcaatgacca agaacaaggt cgatagcata tgaacctgca acatgagccc taccgctcct
    26641 gccatgagga atatcggtac ttttttagtc tgtaagaaac gaaccgcagg aatcaaacaa
    26701 agcggaaaga gagccactcc ccagctggta aatccttggg tcgcccacca atactgaatg
    26761 gagtaggtcg tcacaaagaa gagggacaag aggatagaat gagcatattt gaccttgacc
    26821 tcgcgcatga gcaggtagag ggaggtggca ctcagagtac ccaagagaag attggttaaa
    26881 atctgatagc ggaaccaggt cccacttaag agtaccaagg ccccctgtag ataggcaaaa
    26941 taaggcccat agagagcatt gacaatccgt cctgactgct gatagccata caaactgata
    27001 atataggaga aattcccctc cttcatctgc atagcagcat catagaaacg attgtagtgg
    27061 aaaatcaagt ccgcacctgt caccatgccc ttagttagca agtggggaac caataataat
    27121 aaagaaaagc ccacaaatag gcctagtgct actaaatggg gatgcttttt cagcatagtt
    27181 tttaacatat agataccttc ataaaaaaag agggaaaccc tctcttgttt ttgtaaatat
    27241 tctgccaatt tgcagacaat atttttcaaa agttagtcac atttcagtat agcaagcttt
    27301 ctccccactg tcaacgaaca aggcaaacag gaaaacaatt ttccattaaa ataaatattg
    27361 attgcagatt tctccgcaat caatacttgc ttataaacca acttcctgga ggctgtcaga
    27421 caaacgtgcg aagtcagcca tagaaagtgc ttctccacgg acactggctt ccagctctgc
    27481 catgccaagt gcctgtgtca gcctgtcctt gacttcttcg gacttgccga aatggttggt
    27541 caggttgttc cacagggtct tgcggcgatg cacaaagctg gccttggaca ctcggaagaa
    27601 gaaatcttcg tccttgacgc tcaccagagg ttgctcgcgg cggaccattt tgagaatggc
    27661 ggaatccacg tttggtgcgg gcacaaagac ggtgcgaggc acaataaagg ccaccttggc
    27721 agtcatgtag tactggaccg caatggacag gctgccgtag gccttggtgt tgggctcagc
    27781 agaaatgcgg tcggccacct cccgctgcat cataaccacg aactcgctga agggaatctt
    27841 gctctcaatc aggtgcatga ggatgggggt ggtgatgtag taaggcagat tggccacgac
    27901 cttgatgggc aggtcaggat tcttgaaatt ctgaatctgg gtctgcaggt cggttttcaa
    27961 gatatcttgg ttgaccacgg tcacattgtc aaagcgaccc agggtgtccg ccaaaattgg
    28021 aatcaggcgg tcgtcaatct caaaggccat gacctcagca gcattctctg ccaaaaactc
    28081 ggtcaaggcc ccgattccag gaccaatctc gatgacattg acattctggt caatctctgc
    28141 cgtgtccaca atcttctgta aaatattggt atcggtcaaa aagttctgac cgaaggattt
    28201 cttaaaggta aacccgtggc gttcaaggac ggcacgagta acgtttttgt ctgcaattct
    28261 catgtgtgtt ctttccattt tccagttgca tagtctatac agtatccagg ggtcacattc
    28321 aaaagataga tatcaaactg tcgattattt tgaacaattt cttcattatt gtcattgtaa
    28381 catttggcaa tcagccttac cccacgcgga acgatatcaa aatcttgata tactggtatc
    28441 gcttgataat aaataaattt aacatcactt tctagaagcc aatccgcaac acaatcttca
    28501 tatatttgca tacacggatg tttatcttcc ttaaagtttc tattgtcatt caagaatcgt
    28561 gtcccggtaa acaattgtcc ataaatagct ttcttattta cgaagcgata gggtattaag
    28621 tggcatcttt catagaaata atgcccgttc agtgcctcaa attgtttatt atcttcttga
    28681 ttaaaaccag gaggttccgc tcccgaatga tgcacttctt tcttctgacc tttagatttt
    28741 cgatccgtat ttttctgtac tctctgctta aaacttctat ctactttatc gggaaaaagt
    28801 agggctcttg catctccaac cttgtttcta taatttacta tttcacatcc actatagtct
    28861 atatgatctt cttttttaac taagcaatca tactcttctc tcctcaaact ttcatctacc
    28921 ctcttgggta aattaaatgc atttctatca gtatcactat tcaaatcaat aaccctagca
    28981 cctgttgatt catagtcaat attagctaga cattccaata attttttatc tatcaccact
    29041 aaatactcct ccatacattt cttctaccaa gctaatttgt atccaattga tagtgtcagt
    29101 atatccttct ctatctgtcc ctctaatctt cagctttact tataatggtc ctttagcgac
    29161 aagatataca actggtctgc ttccaccata taaatcaacc gattctccgc atcaatcctt
    29221 cttgaccaag cgccttgata atcatacttc aaaggttctg gtttggcaat gccttcaaaa
    29281 ggatgtcgct gcatatcctt gataatttta ttgattctct tcagtgtttt cttatcctga
    29341 ccttgccaat aaagatagtc ttcccaagca tcctctgtaa aatggattcc catgctagtc
    29401 tgcctctatc agatggcgtt cttgggtttt ccccgctttg acttgagcca taccacgcaa
    29461 aactttttga gacagataag tgttccgagc aacagcgagg gtttcttgta aactatccca
    29521 ctcgctcttt gacaaaacaa caatatcttc ctctggattt ttattaacca cgaccaaagg
    29581 ctcaaactcg tcattaacct ttttcatata gtcctttaag tggtttcgaa aatgggaata
    29641 tacaatagct tccataagca atacctctca tcatttctag gcttactata gcatagaaaa
    29701 aaagagttgt caaacttatt gtacaactct tcatcaattc ttatgcgtgt ttctcatttt
    29761 ttgcctttta ttttaaaaaa gcggaacaaa atacttgttg ttttccgaat taatctagtg
    29821 tagggaagtt ccgaaggcgg gacggaaatc tgatgcagga ggtgaggcca tggcacaact
    29881 ccttagaaag gtgaccgtcg atgtcagttt atgaggcaat tgagctaatg ataaactttg
    29941 gcattctttt actggctatt ttaacatttc aacgaaaaaa ataaacagta aaaccgcact
    30001 tccaactttg acaggtctgt aagtagcggt ttttctgtta tctacaaatc cgtcccgtct
    30061 ttaaaacggt cctatgggtc atcaggtgaa aacttggtga cctttctgtt tttattgtag
    30121 gctttttaag tgagattgtc aagtcaatcg gcagtttgct tcgctaaact cacttattct
    30181 ccaccttcca ctcgccgtct tcaaaccagt aaaaattctc cgtcagttgt ggctgttcaa
    30241 agatttccag catggtttca aagccgtcag ccagctgaac attcttcaaa tcctcacgtt
    30301 caatccagaa cacttctccc tcatctgaag attggataga gcctgaaaaa tggctggttt
    30361 tgtagcaaaa tactagataa cgatagtggt caatcggatc cgtccagttt tgaatgccac
    30421 agagttcgag attggatacc gtcaagcctg tttcttcttt gacctcgcgg acgacagagg
    30481 aaacaatact ctccccgtgc tcaacatggc ccccagggaa agtcacacca ggccactttt
    30541 cagacttcct atcctggatc aaaacctgct gaccgtctgt aatcatacac atattggtta
    30601 agacaacttg ttctcgtcta gacattccct atctccccaa atcatcaaaa taatagagat
    30661 tcaaaaattc ttcctcagta actggacgtt caaaattgta aaaccagcga tagacttcca
    30721 cggctagtcc atcaaactct accctgtcgt ccatttcttg cacaccggca atatgaaaca
    30781 aacggctctg cttccaaata ccatccgcat tgacatagcc atcttcaact aaaccacgca
    30841 aatagtctgc tagtttgttc ttatcaacct gctcatcatc ccaaacaagg acatcagccg
    30901 gcagcaagta ggtcacttct tcataagatg aataattttc ataagaaggt tcaaactcgt
    30961 ttttaaccaa gcacttaaca gcgtagaccc tatccatgat agctctccat agcctcttcc
    31021 acttccacca aacttatccc aaacaattcc aatcgtttga ggagttgttt gccgttgcag
    31081 tagccgatgc ggagcttctc tcccagatgc tccctccgct tgcgactatc tccgcccata
    31141 aggagcccta ggcgcatcag gtctgacttg gtgatgtcaa agttatgttc atcatcatag
    31201 tagccacgca cgcctgcgag ggccttttcc aagtcctcaa agctggcgtg ttcaatgccc
    31261 aaggaccgcc cttttgtttt ggacttggga gcagcctcgt cccgctgtaa aaaagcgtgt
    31321 ttgaccgtgg gaatggcctg cataatgatc tttcgaatcc gctcgccatt gtagtctggg
    31381 tcagtaaaga taatcacgcc acgcaggtca tggagtttct cgatgcgttc caggtcatcg
    31441 tctgatatgg cagagcctct ggtttcgtag gtatccacct cgtaaaaccg tttcaagttt
    31501 gccgtgtcgt ccttgccctc gacaacgagg acttcttgta tcttaatttt ctgagtcaat
    31561 tctgaacaag ctccttgcat tctcgtaggt cgctctcgcc acttcttcga ccgactggtt
    31621 gcgaagctgg gccagcatat ccaccacata tctggtgtag ccggtgcgat tttcccgacc
    31681 acgcttggga actggggcca ggtagggcgc atccgtctcg accaggattt tttctagggg
    31741 caatgcttgc gccgcttcct gaagttcgac agctttcttg aaggtcacca ctcccgagaa
    31801 ggagatgtgc atacccaagt ccatgaaggc ctgagcctcc tccagcgtac cagagaagga
    31861 atgcatgatg cctccgcgtg gaccgacgcc aacttccttg atgatctggt aagtatcttc
    31921 caaagcatcg cgagtatgaa ccacaaaggg taagtccaac tgcttggcca gctccatctg
    31981 tcgcttgaaa acacgagcct gggtttcctt atctgccgtc atccagtagt agtccaaccc
    32041 aatctcccct agggcaatga ccttgggatg tttaagagcc ttgagtagat aacgttcaac
    32101 ttcctcgtca taagtgccag cctctgtggg atgccagccc agtgtcagat aaatttcagg
    32161 gtgctggtca gcaagctcca tagccttgtc aatggttgct cggtcaaaac cgaccacatt
    32221 gtggagggtg acccccatct ccttggcaaa gtctaattct tcttggaccc gaccgtcaaa
    32281 ctgctctacg ttgaggtggg tgtgggtgtc aaaaatttgt atcatcgttc catcactttc
    32341 tttcctacta ttgtaacata tttcagaaga ttcttatgag aagaaaaaaa ccagcagact
    32401 cgagtttctg ctggcttctc ttttcatctt cttatgctac tgtaagaact ttacgtccct
    32461 tacggcgacg agcagctaac acgcgacggc cgtttttagt tgccatacgg ctacggaaac
    32521 cgtgtttacg cgcgcgacgg attttacttg gttgaaaagt acgtttcacg atgaatacct
    32581 cctcttagat tcttgtattc gtttagccgg ctagttttga tcagttacta aacataccaa
    32641 actattttat ataaattctg ttcgtttgtc aagctattct gccatacttt taggaaagaa
    32701 tcagaaaatc attgaaaaaa gaggactagc ctctttttaa tcatgattcc cttcaatatc
    32761 tacaacgaca tagcggttcg gctcgctacc ttctgaatag cttgtcaaac catccatttt
    32821 agagataatg cggtggataa ttttacgttc gctacttgac atcggatctg tatggtaggc
    32881 ttcctgctct gccaaaacac gttctgccaa tttttgtgcg tagccttgaa gaacctctgc
    32941 gcggtgctct acataatcat tcacattgat tgtaatatag aaattacgct cataacggtt
    33001 gtataagaag ttctgagcca aaagttgcaa agcctttaag acttttccgt gataaccgat
    33061 aacacgacct ggttcattgg tatccacttg aatattgatt gtacggcgat tatgacttgt
    33121 atcaatacgc gcctcaacat ccatatcatc cagaatttct tgtacataag ctgtcacttc
    33181 tgaaacaact tgttcaatat catactgggg ctcaatctta atatctaaat cagcaaaatt
    33241 atctgcttga ttttctgaga cgacttcttg atttacgtct tccttagcag atgttgttgc
    33301 atctgtagta gttagtaaat cctctgaaag aatttcaatc cgacctgttt cttccaaaat
    33361 cgttgtcgct tctttttcat ttttcaagat ctgcgcttta atatcatcat caagcgtttg
    33421 accagacttt tcaaattctt tcaccgctgc aacaactttt cctaggtcaa tcgtagcctc
    33481 tgaaacgctt tttactggtt cattgaggtc attaatttca cttggaacgc cacgaactgc
    33541 tttctgatta gccttaacaa ccgttgtttc attgataaca tcaatatcca caatcgctgg
    33601 ctttttaccg aaaccaagga aacctttttt ctcacgcgca accacagtaa tatgtgcttt
    33661 ttttcgagga atatttagct ctaccaagcc attctggatg gcctcttcaa cacttgctcc
    33721 tgtaaatttc atcttctctc tcctagtttt cctatttctt tttctgtgct tttttctgtg
    33781 cccgtcgaat ttttgcctga cgttcttttt ccgcatcaat tttcgcttga cgctctgcta
    33841 ttattttaaa cggattattg aacaccaagg tttgagcaac ctgataggca tttgacactg
    33901 tccaatacaa agccacccca ctagcagctg ccacagcaaa gaaaaagatt atcacgggca
    33961 tgacataggt cataattgtc atagccatat tcttctcaat tgctgattta ttggtcaacc
    34021 atgagctgag gaatgtaaac actgcagcta gaatcggcaa aataaagaac ggatccggct
    34081 ccccaagatt taaccaaagg aagtgaccta ctttcaaggc ttcaacacgt gtcagagctt
    34141 gaaagagggc caaaaggatt ggcatttgaa taaagagcgg aatcatggac gctctcatgc
    34201 tgacgccatt ctctttatag agagcttgcg ttgcttcata aagctgctgg cgactttcca
    34261 tatccgttcc tggatactcc gcttgcaact ttttcagctg aggttgaagc tcctgcatct
    34321 tccgtgagga attcatctgt atttggaaca acggcaacag aagggttcga attaaaatgg
    34381 taaaaagtat aataccgatt ccaatttgac cgttgataga taggaactga ataatgctgg
    34441 caaaccagta aattaatcta tcccacgcat ctgtagattg actggtcact ggccctgttc
    34501 cgcaggctgt taaaacaatt agagatgcta ccagtagacc tacccattta actttctttt
    34561 tcaatcacaa caccttcctg gtatagttta gctagtttca aaacatggat gaggttttgc
    34621 ttcatttctt gataggacaa ttcctctaca ctttttcgag caatgataac aaagtcatct
    34681 gctaccagtt gatgttggca ttcaattaag atgtgacgaa tcctgcgctt aatcttattt
    34741 cgcatgacag cgtttcccaa ttttttgctg acagataaac ctactcggaa atgcttttgc
    34801 tctttaggta atcggtagac aacaaacctc cgattggcga cattgtttcc ttttgtaaaa
    34861 atgtcattaa aatctcgttc acgcttgaca cgatagcttt ttttcaaact gccactccat
    34921 ctttcaaaat tacttctatt ataccacaaa attcaaaaaa gccaataaac ataccgttta
    34981 taggcttttt gcgttctgaa tttcctcttt ggcacttttc aactggtctg caatcgattc
    35041 aaaacctgtc ccgccaaggg aatttctacg actgacagca actttggagg acaaggcatc
    35101 ataaatatct gcttgaataa gaggcgaaat agcctgatag gtctcaaatg atacatcctg
    35161 tagataatag cctgccttgc tacactccaa gaccagtttt ccaacaatct catgcgcttt
    35221 ccggaagggc agacctttac tagccaaata atcagccaac tctgtagcat ttgaaaagtc
    35281 cttctctgtc gattgagtca tcctttcctt atggaccgtc atcgttttca gcatacccgc
    35341 caaaatatca atagaaatca aaactgtttc tgccgtgtca aacatgcctt ccttgtcttc
    35401 ctgcaagtcc ttattatagg ttaaaggcag ggatttcatg actgtcagta ggccaactaa
    35461 gttcccataa actctacctg ttttcccccg aatcagctca gccatatctg gatttttctt
    35521 ctgaggcatg atggaagaac ctgttgaaaa ggtatcggat agggtgacaa attggtattc
    35581 atgtgaacac cagttaatga tttcttcaca caaacgcgac atgtgcatca tgaggatact
    35641 ggcatttgac agaaattcca agataaaatc acggtcagac acagcatcaa gagaattact
    35701 atagggcttg gcaaatccca tcaaatcaga cgtcatccga cggtcaatcg gaaaggtcgt
    35761 ccctgccaag gccgccgcac caagtgggga tacatttgta tgctgcatgt tgaatgcaaa
    35821 gcgctcactg tctcggctga acatgttgta ataggctaac aagtgctgag caaaactaat
    35881 gggctgggca tgttgcaagt gggtatagcc gggcatgatt gtttccacat gctcctgtgc
    35941 aaggtctacc aaaatctgac gtaggttggt caatttgtct acaacttgaa agagtgtatc
    36001 cttcaaataa aggtgcatat ccgtagccac ttggtcgtta cgagaacgag ctgtatggag
    36061 tttgcctgca actgagccta ttttctccgt caatagactt tcaatattca tgtgaatgtc
    36121 ttcgtttcga atatcaaaca ctagcttgcc agcctcatac tcctctagca attcttccag
    36181 accagcttga atgacctgag cctcagcttg agagataatc ccagtttgcc ccagcatctt
    36241 gacatgggcc agtgagcctt gaatatcata cttggccaac ttttggtcaa agcgaatgga
    36301 ggctccgaat tcttcaaccc attcctcaag actagcttca aagcgacctc cccataattt
    36361 ctttgcttcc ataagctcct actttctagc tctttttatg aatttccgca ttgaccttgg
    36421 ttggtaatcc ccaaagcttg atgaaaccaa ctgctgcatc ttgatcaaag gtatctgcac
    36481 tggtataggt tgccaaatct tcgtcataaa gggaatttgg agatttccga gcaactactt
    36541 tggctgaccc cttatataat ttcacttttg cggtgccatt aacaactgcc tgggtctgag
    36601 caagataggc cttcaaggca tctgttgctg gattgaacca caaaccattg taaatcaagt
    36661 tagagagttc atttgaaaca atcggtttga aatgcgatac ttcccgtacc agggtcaaat
    36721 cttcaatttc cttgtgggct gtcagaaggg taatagcacc tggacactca taaatttcac
    36781 gtgacttgat tccgactaaa cgattttcca cgtggtcaat ccgacctacg ccatgcttgc
    36841 ctgcaatgac attgagtttt tggatgaggt tggctagact gagtgtttca ccattgattg
    36901 caactggaac gcctgcctga aattcaatat cgacatactc aggagtatct ggtgcatttt
    36961 ctggagaagt agtgatgcca aaagcatctt ctggcgcttc attccatgga ttttccaaga
    37021 caccacactc attggcacga ccccagaggt tttggtcgac tgagtaagga ctgtccagat
    37081 cggcaggaac tggaacacca ttttccttgg cgaagatgat ttcttcttca cgagcccact
    37141 tccattcacg gacaggagcc acgactttca agcttggatc tagggctgca atggctacct
    37201 caaaccgcac ctggtcattt cccttaccag tacagccgtg ggcgatagtg gttgctcctg
    37261 ccttatgagc catttccacc aactttttag aaatcaaggg acgactgaga gccgatacca
    37321 gcggatattt ttgctcatag taggcgtggg cttgtagggc tggtaggaca tattcttggg
    37381 cgaattcttc ttttacatcc aatacatggg actcaatagc accgattgat aaggccttat
    37441 catgtatgaa gtcgagatcc ttaccctctc caacatccat acaaaccgca atcacatcat
    37501 aatctttttt caaccaagca atcgcaacgg aagtgtctag gccaccagaa taggctaaaa
    37561 ttaatttttc ttttgtcata aactttctca tttctatata tattagcaaa taaaacttag
    37621 tgattattat agtgtatatt tatacttttt gcaacatatt tatgcaaatt ttcttaaaaa
    37681 atgaataaat atcgtacatt tccagaaaaa ttccaaaaaa aagctagaga atattctcca
    37741 gcttctaaaa tatattcctc atcataactg attatggttg ataaattttc cgttctttta
    37801 aaattttcca gaaataataa gctaaactaa aatcaagcaa tccatgaata gccgagccaa
    37861 cacccaccaa gccaagcatc gttatccagt aggtagcaga agtttgttgc cccgaagtaa
    37921 gcaccatcac cacaatatat tctcctagac catgcaggag attaagccca attcctaata
    37981 gtaaaaagcg cttagaatcc atgagaatcg gaaaacgctt gaccaagacc gcgcctaagg
    38041 tgaggaagaa cagatgcgta agcgcccgaa atacaataac gattggaaaa ccggcgagga
    38101 aaaagcctaa actagaacct aaagcaacaa aaatagcagt agctggtgaa ataaacatgg
    38161 ctataaacaa aggaatgtga ctagcaagtg tataggatgc tggaccaata atgattttaa
    38221 tcggcatcat taaaggtatt aaaatggcaa atgcggttaa aattgcacta attgatagct
    38281 gcttaactga atttttagat gatagtgtta attgggacat caggcacctc tctttctatt
    38341 ggtttgatta taaaacaaaa ccttacaggt gtcaagacac ctgtaaggtt tattaatttt
    38401 ctagtaaaat acctgcatgt tttaaagctg ctgaaagttc attataggct tgcacagatg
    38461 ggaaagagac tgtatgtgta tgaactcctt ctgttaaatt actcagtaac acaccttggt
    38521 attgacccaa ggcatccaaa aaatgatccc tatcttctaa acttgcaata ttcagcttgc
    38581 ctgataataa gccgtaaatg ggatgctcaa tttcaacatc taatatttga gctccaccct
    38641 ctagcaagat tgtcaattct ttttctacct cttctggacc atgttgacaa gctatctttc
    38701 gaatgtaggc tccttcagta gatggcaaag aagattggag taagtaccct cttggagttg
    38761 ccaagacagc ttctccctcc gcacgaagca aggctacatc tccaacaatt acttgccgac
    38821 tcactccaaa ttctttcgcc agataattag ctgcaagggg atcgaggctt tctcgtaaaa
    38881 gggataggat tttcttacgt cgttctgttg ctttcataca cattcctttc gtacactttt
    38941 ttccattata tcaaaattcc tgtaaatcaa cctttcctca accaaaaaac ggaaactgca
    39001 gagcagtctc cgttatcatc tgctagttta gcaatgcttg aatagccgca atgtccaaac
    39061 gtttcatggt catcaccgct gcattgactg ccttgacctt ttctgggcta gccgtatcat
    39121 atgcttccat caaaatacgc ggcacaatct gccaagaaat cccaaactgg tccttggccc
    39181 aaccgcaaat ctccgcttct ggcacagcag acactttttc ataccagctc tccgcttctt
    39241 cctgactgtc tacatagacc atgaatgaga aggcttcgtt gaaagaagcc acgccaccgt
    39301 agccgtggtc catgacgatg attttttggt ctccgataaa aagctccgca taattcaact
    39361 tggcagccgc caccgcagcc tcaccttcgc catagtaaga caagcgacca agacgaactt
    39421 gatgcaactt atccttgtag taatccaaca taggctgggc caaaccaacc tgttcctgcg
    39481 agaagagcag gcagatgtca aactgataag gcttgtccaa gtccggtgca taagacagtt
    39541 gccaagacag accaaagttg aaactgaatc aaatccgaat cacccgaaga cgtatccgta
    39601 atggtgtagg tccagtcaat cttgcctccg aagagttcta catagaaagc taccgcttct
    39661 tttgcctctg tatcgtacca gagatgtggg attatagttt gcattgattt ctcctttgag
    39721 ttagtagccc cagtataaca cttgtccgta caaaaacaaa acatgttgcc ttgcacttac
    39781 agatgtgcta tactgaataa ctacaaaatt gacaggagaa tgaaatggaa atctggaacg
    39841 cctacacagc cgacggtcac ttgaccgacc acaccctcac acgcggagaa accattcccc
    39901 acggcctcta ccacctggtc gtcgagtgca tcatccgcca ccacgacggc aacaccctct
    39961 tcatgaaacg cgacagcacc aagccctcct accctgacta ttacgaagcg acagcaggag
    40021 gttcggcatt gtttggggaa atagcagagc aggctatttt gcgcgaagtt cgcgaagaga
    40081 caggcattga gctgacagct gaccaactcc gccaccatac acactttgtc gcccatgacg
    40141 accagtgcat tttccactgc tactgggctg aaaccgactg ggacaaagct gctatccaac
    40201 tccaagccaa tgaaaccagc aactacatct gggtcccaca agaaaagttg aaagattttc
    40261 ttgaaacaga gctagtcatt ccaagacaga aggtttgtgt ggagagcttg tttttacaaa
    40321 gctaaatccc cttaacagac aaatccccgc tatcacagga cagcggggtt attttatttc
    40381 aatccagcaa ctaggtcagc aatatcggct ggtcgagtac gacagcagcc tccaactacc
    40441 ttggcaccca gttcgtgcca ttcaagtgtg ttgtccagaa gagaatggct gtcgtctgcc
    40501 ttttccttcc aagtttgagt ggctccatca tagacttccc cagaattcgg ataggtgaca
    40561 aatggtttat ccgttttttc tctcaactga ctgagaaagg ctggatagag cgagggagct
    40621 gtacagttaa gaccaaccgc caaaatctga tcactgctgt tgaccagctc tgctattttt
    40681 tcaatagccg ttccgtcaga aatcgactga ccgtcttgtg aggtgaagct gatataagcc
    40741 tcaacctctg ggaaatcttc tgccaataac tctaccaagg cttgtgcttc aagaacattt
    40801 ggaatagtct ccaaggctaa aagttcagcc ccctgttcta agaggagctc catccgacga
    40861 cgatgaaaag ccttcaattc ctccaaacta atgttgccat aatcgcctgt atattcagca
    40921 ccgttggcca aataggctgc gtagggaccg acatcgcctg aaataagagg ataggttcga
    40981 tgtacttttt cagcttcaga caattctgcc cagacctcat cacgcgcttc tttcgccaaa
    41041 tcaacggtca agcaaatgag gtcttctgcc tctgcttgtg acaagccaac ttctgctaat
    41101 ccttcaaagg ttgcctgata ggtggaggtt gtcaccaagt ctgccccggc acgaatataa
    41161 tccttgtgaa tatccttgat gtactgggga ttttccaaaa gatatttagc agaccaaagc
    41221 ttacccgata catcataccc tcgaaactcc aactctgttc caagagcacc gtgcaaaatg
    41281 atatattcct tttgttctag tagttcttta aaacgcccca tactctcctc ctaccacttt
    41341 ttaaagcgga tatagtgata aatatagcag ccaatcatga atggcacacc aaagtaaaga
    41401 ccggcacgct gagaaggatc ccagccaatt ccgatgatgg aaataactag cagaataacc
    41461 gtaatccatg gcaaggtcgg tgagaacggc gtcttgtatt ccagttcatc ttcactatga
    41521 gttttcaaaa attcacgacg gaagccgatt tgtgccaatg gaatggccaa ccaagcaatg
    41581 acaaccgcaa aaccagcgat agaaaccagg gccaggaaga ttgtatcttc tgcataaatt
    41641 gacgcaatca aggcgatgac tacaccaatc atggacaaaa tcatgccacg cattggaaca
    41701 ccgtgtttat taatttttac caattccttg ctaatcatgc cttcatttgc caaggaccaa
    41761 agcatacggc ttgaagcgta tagccctgat gtagaggccg ataaaatagc tgtcaagata
    41821 ataaagttca taatatctgc agcgtaagga aaaccgattt tatccaatac aagtacgaat
    41881 ggcgcttctg tcacacctgc ttctgacata ggaagtaggg ctgccaagac tacaatggtc
    41941 aagacgaaga agatgaccaa gagaccgatt gttgacttga tggcttgtgg cacggctttc
    42001 ttaggattgt cagtctctcc agcggcaatt ccgatcattt ccacacctga aaaggcatag
    42061 ttaaccgaca gcataactga aatcaaccca actaggccgt taggaagtaa gccttgggct
    42121 gtaatattag taaagagcgg cgcagcattg gttccctcaa atggcaaaat accaaaaata
    42181 gccaaagtcc caagcacgat aaaggctgca atggcgtaga ccttgataga cgaaagcgca
    42241 tcttctgcct tggcaaacca gccaacagag agtgtattga gtccaaaaac aatgactgca
    42301 aaaatcgttg caaatatcca aatcggcaca ctaggaaacc agcgttgcat aagctgtgct
    42361 gctccaacga actgagaagc tagagcgact acccaacaaa gccaatacat ccaggccacc
    42421 ataaatcctg ttccaggact gataaacttg gtcgcgtagg tatgaaaaga acctgtgact
    42481 ggcatggcta ccgaaagctc acccaaagaa aacataacca aatagaccat aacagctccg
    42541 aaaagatagg ctgcaacagc tccaaatgga ccagcctgtg caatggtata gcctgaactc
    42601 aaaaacaatc ctgtcccgat aaccccgccg atggacaaca tctgcaaatg acgactgttc
    42661 atctcgcggt taaaggtccc ttgattttca aaattatgat tttccataaa ctctcctaaa
    42721 tagtaatgat ttatttatga taacacagtt ttgcaaaaaa tcgttatacc gttttcgatg
    42781 caactgttat agttatcagt tatagcaaaa tccccgctac cataggacag cggggattac
    42841 ttgtcttaca aagatttcaa catattatcg atatgctgga tagatttttc acgaccgagt
    42901 aggtaaatag tatttggcaa ctctggtccg tgcatttcac ctgagacagc gatacgaatt
    42961 ggcatgaaga ggtttttgcc cttgatgcct gtttcttttt gaacagcctt gatttgcggg
    43021 aagatattat ctggttggaa atcttcgtcc gtcatagctt ccaatttttc cttgagggcg
    43081 ttgagaacag ttggaactgt ttcgcctgcc atgacttctt tttcctcatc cgtcaattct
    43141 gggaaatcag agaagaaaag gtctgtcaaa ccaacgattt catccgcaga tgacatctgt
    43201 ggcttgtaga gttccaccaa tttttctgcc ttgtctgtca aacgccccgc ttcttccaag
    43261 aatggcttag caaggttgaa aatagtttct aaatcagcat ttttgatgta ctcattgctc
    43321 atccagtcca ttttcttctg gtcaaaagct gctggtgact tgctgagacg attttcatca
    43381 aagagttgga taaattgctc acgggagaag atttcttcct cgccacccgg gttccaaccc
    43441 aaaagaccga taaagttgaa aacagcttca ggcatataac ctttacgacg gtaatcttct
    43501 atgaactgaa gggtgttagt atcacgtttg gacagttttt taccagtctc agagttgata
    43561 atcaaagtca tgtgaccaaa ttctggcgct tcccaaccaa gtgcttcata gaccatcaat
    43621 tgcttaggtg tgttggcaat gtggtcatcc ccacggataa cgtgcgagat ttccatgaga
    43681 tgatcgtcca ccaccacggc aaagttatag gttggatagc cgtcacgttt ctggataacc
    43741 cagtcgccac cgatgttgcc accttcgaac tcgatttcgc ccttaaccat atcattccat
    43801 ttgtagatac ctgtttcatt gacagccaag cgaacagttg ggacaatgcc agccgcctca
    43861 cgctctgcga tgtaggctgc tttttcatct tcagacatac ccaggtattc gttgatgtag
    43921 cgaggtgttt cgcccgcagc ttcctgacgc tcacgctccg ccgccaattc ttcttctgtc
    43981 acgtaagact tgtaggcctt accttctgcc aagagctgat caacgtattt ttggtaaata
    44041 tccaaacgct ctgattgacg gtactgctca tgagtttctg gactctcatc ccagtcaata
    44101 cccaaccaac gcaggttttc aagctgagaa cgctcgccat cttccacatg gcgtttgcgg
    44161 tctgtgtctt cgatacgaat aaggaaagta ccgccgtgat gacgggcaaa aagatagttg
    44221 aacaatgctg tacgggcatt tccgatatgc aaaagtcccg ttggacttgg tgcgtaacgc
    44281 acacgaattg gtttagtcat gtttctctcc tgtaaaattt caatcaagaa cattatagca
    44341 tagatatgca taagaaaaca gaaaaatcag cctagagaga ctgattttga ggtgtttttc
    44401 atgcttttga gttttagcta tcatttaatc gaaaataaac aatggataaa cgaggacttt
    44461 gtactactat tctatacgat agctatgtcc acaacttaca caagtgataa tggtatcaaa
    44521 caagccctca gcaggctttc cacacgccgg acaatagact ctcttggcct ccaggcgata
    44581 ggtagtcttc ctgataagtg attgcccttg actttctaca acatctcttt ccgactttca
    44641 tatgccaaaa cctctttcaa acttcttccc tgatgtcttg tccgaggcgg gcgaagtaag
    44701 atatagaaag atagtgtgaa aaagacaata aaggctaccg tcacaataat caaagcggta
    44761 ttcactaagg aaggtactga aattccagcc tccttttttc ttctaaaaaa atctaaaatc
    44821 atctgccaga gaaaaattgt agagcctagc caaatgataa aaatgatagg gaaaccaaat
    44881 tttgttatct ctaatcgata gcgtcgcatc tagggctcct ttctggcaag ccaagcacca
    44941 cagtggctac acgattgtcc ttgtcctaat tctaaaaaat tttctgcact gcaagattca
    45001 caaataacaa gataggtctc ttctgtaatt tgatagtgtt caaagagttc aaaaagcgcc
    45061 cttatctgta cttgtgtttt aacgtgttct tctaatcgag attttcgata agtcaatgca
    45121 caattgatta gtataattac aatataaaga actgtcactc gtacaatcaa agttttgaca
    45181 aaagttacct gttccccctc ttctagaacc aagaaaaata aaactagcaa aggaagaaac
    45241 agagaaattg atagatattt caggttattc gtcgaaaagg atttgacaat attttctata
    45301 actgtccgac ctcgtggttt aatcaacaat actaccattg caccgattat ataaactgga
    45361 ttgggaaaac caatcaaaag caaaaaaaga gctaataatg gaaagcatgt caacacacca
    45421 tctgatgaca gcttaaagag acgcatcgcg agtaagggaa tcccaaatat gactaaaaag
    45481 gtcacaatta gaataaggac tgaaaaggtg ggatcatatt gcatgaattg atacaaactt
    45541 attgttgcaa acatacagta agcaattaac caattaaaaa gtaaccaact acgaaatgca
    45601 tcccagattg attttaacgc tttaagcatg tgactgttcc tttttttctc tcaagtagtc
    45661 tttgtaacgt acttttcctt ggtatatctc atccaatgcg ttaaccttca gcttaatatt
    45721 ctctaaaaca ccgcaactat agtaaacaaa gcctgctaat attaatcccg aaagagagaa
    45781 tactatagtg ccagcaataa atttagtata aagaatagta tgagaaaaga ggagaagtgc
    45841 caaaatagta ttagctagtc ccatgaagac taaactcaaa aaacgaaata attgatacat
    45901 cagtagtctc cttgttttgg ggtaaagaca tcctcactat tatctgcaat aatttctctt
    45961 cgaacccttc gatagtgact atcagttgct gtcaaactac caataatagc tacaccacca
    46021 ataacaataa cttcaacaat ccaaaaaact ctgacagaaa tatagttgga gataaaaagc
    46081 ataatgcttt gaaaaataac ccagataacg gttacgatat tgatgggcaa ccagtcagca
    46141 aagtgtcgtt taactattag ttgcagaaaa aacagaaatt ccgataaaac caataacccc
    46201 aatgcaataa aataaagacc aatttccttg tgaggaatca gaagtcccaa ggccaccgtt
    46261 gtaagcatga ccagcactcc tgtcacatat atccaaatat ttttactcat atttcctcct
    46321 agcgtgactg tccacagtta ctacaaaatt tagctccgtc ggtaaaagcc gtcccacatt
    46381 gaccacagaa tttcgctaaa ctaactgtag ggctgttttc agaatttatc attttttctg
    46441 tttgtatcgg tatctgaggc tgttgagcag aatgagctcc ctgtcccaaa tttcccataa
    46501 gtgttccaaa atttgctccc attccgagcc ccatggaaac tcccatgcca gcccccataa
    46561 ggttccctgc ggaaccttca ttttgtgccg ctttttctag aacatcaaat tggcgctctt
    46621 cttgataact gtatccctca atctcccgag tgctacgctc cccttttgca ctaagaactt
    46681 gtttatggaa tcgaaacact tccttgtacc cctcactatc ttggtttact ttcaaggctt
    46741 caatattaaa ttcttgtaca gaaattccat atttagcaaa acgattgctt aaaagctctg
    46801 ataacccttg agcaatatca tggctatgca tttcaatatc aattgtagca attcgactat
    46861 tcgcaataac tcgggaaata ccagatgtaa tcgtcccaat agccgcctgt ctgaaacgct
    46921 tctgaaatac ttctgccgta ataacatctg gataactcgg cataaattct aaaataaagg
    46981 tttccaagtc tatgattctt ggtataaaat ttccatgtgt ttttaactca acaggaattt
    47041 gactttctgg atcgcgaact agtatcggcg aaggagtccc ccagccaatc ggctgtaaat
    47101 catacatgtt aacaaaccat aggaaagatg aatctggtga cacaccgcca ctaacaaaag
    47161 acttgagttt tgctagtccc tgagtattat ttccctcaat tttatgtttc ccttcttcgt
    47221 aagacgcaac agctcgcccg tttgaaaaga agacagcccg ttgacctgga ttaacaatta
    47281 aggttgttcc cggcttcata tttttattag ggtgccgcca tgcaagaata tttctggtat
    47341 cttctccttc atacctcaca acttcaaaaa gatttaatga cataatatct ccttttccat
    47401 taggaaaggc ttggctggta agtcaagcct tgttatatgt agtataacaa gcgatttgtc
    47461 aagtatttag tagcgataat tcctttttta tttctgattt tgaggtgttt tttgattacg
    47521 tgccagccag tagaggacat agaggaccaa caagccagtt gccgttagga aaagtccgct
    47581 aatctgatcg acggctaata ccaagaccaa acctgatacc agcagtcgag taaaggcttg
    47641 acctagcata aaataggttg acaccgctcc gccaatggtc gccaactgct cctctggcat
    47701 agaattgaca aacttagcgt taaacttagg tccactagct cctgaactaa tccccattgt
    47761 agtaaggaag aagaaaataa ttggcagttg atgtagcaac attccgacaa acacgccaag
    47821 aagagagaaa gtggctgcca cttctagcgt caccatgctg gtctttttga aaagggtaaa
    47881 gaccaaggtc gagcccagaa tatgtccgat aaagaagatc agaatggtca gggcaagggt
    47941 tgtttcaaca ttgaggaaga cgaggcctgg gtcttcgcta atcagcagga ccagaatagg
    48001 atagagaatc gctccacagg cgttgataag aggattggta atcaggacca ggcggaactc
    48061 gggtatcttg cgcagctcca cgatggcttg cttgaaggaa gctagaatgc ctggtctctt
    48121 ggttttttgc tcagtctgga tcggctgctc tgctattttc aaaggctgct ccgtaaggag
    48181 tttgcgaaag actggtgtca gcagctgcat gatgaggagg gaggctaaaa aggtgccggc
    48241 gttgagaaag gccaggtttt ggtaggagag gaggccgacc aagagggcag agagagcctg
    48301 aaaggcgatg ttgaggaggc tggtcacggt ctggcgaaag gccgagtact gctcccgctc
    48361 ttccttgggc gctacgcgta atcccagagg tgtatagagg ccgttttcat agaagccagc
    48421 gaagtctgca aagacattga agctagctgc cactacgaca atccagaggg ctggctcaaa
    48481 gcccatgcag aatccgagga tgaggtatag aagaacacga aagagtaggg tcagcttgat
    48541 agtgctgatt ttgttgaccg tcttatctgc cagatagcct gtaaagagcc ccataaagct
    48601 agggaagatt tccgagaagg tcacgattgc cagagccaga cggctgttag gcaccagtaa
    48661 aacatagttc atcagggcta ggtaatagac cacatcgcca aaattggaca gcatatccgc
    48721 cgtcagtatc cataggtaag tagcattttt caaaatcttt ttcatgataa tccctttctt
    48781 ttgaataatt tccagaatat tctgaatttt tgtcctacag aggagcctgg atagactttc
    48841 ctctgcgatt attcttttac atagagtaaa tatttaatgt agaaaatgcc atatcacccg
    48901 tcaccaggag aaccttttct tttggctcag atgcgtagtt gttagttgtt gacatggcgc
    48961 tatccaactc tacaaccgct tgccagtcag caggcagata gagtgtgata tttgagaagg
    49021 ctgcatcgat atgaaaatct gccttatcac ccagaatcac cgcctgatca aaatagaccg
    49081 tactagatcc aaaggctaca tccacactat catggataaa attttcctca tggatataac
    49141 gagtcgagga accaaaagct gtatcgcgcc ccttgtcgcc aatcacccct gtgacaaaac
    49201 tttttgtatc gaccatattc ttgctcctcc taggttttat taacaacttt acccctgtac
    49261 aagccagtat ggcacccaaa atcaaggtcc aggtatcaat ttccaaccaa tcaaagtgac
    49321 tgtttagcac aataaagacc aaggttcccc agacaaagct tgtaactagc tgttttttta
    49381 tcatcgcttt taaaaaaaga taactccaac cgactaccag tgccaacttc caaagaggaa
    49441 attccacagc cggcaagtag tcttgaaaca agaccaagcc tgccaaaatc agtaaagcta
    49501 ttcccaaacc atttcttttc atcttcctac ctcatttcct gtaacttttc ttttaataaa
    49561 tggtaataat gtcgcgaaac gtggacttcc ttgtgagtct tatagaagga aatccgactg
    49621 gtgcccgaga aggacttatt tagcgaatag actgacttgc tattgacaat ggttgactta
    49681 gctaccctac aaaagtagat gggcaaatgc tcctcaagtt catagagttt catcttaacc
    49741 tcgtaggcat catcgcctgt atgagcaaaa atcttggttc cgtccgtttc aaagaaaagt
    49801 atgtcaccca atgaaagaaa atactcgctg ctccccttgt aaaaaacaag cgagggacga
    49861 ctaacttgtt gcaaagcttg ctgaatctgt tcaatctctg gtcccagctg gctggttcgg
    49921 ataacaactt caacctgatc taagatgtca tcaaattcaa tcctaacttt catagctccc
    49981 tcctttttga tagctctatt ataccagttc gacatccaat tacaagggca tttcagtaag
    50041 tggtaaaaat gtgctagtaa gtggtaaaca ttcatcatta aaagccgcta gaattctcta
    50101 acggcttcat aattatttca gtggagttct tttatcatct tctcttttac gacgcttata
    50161 aaatgcacct agaaggagac ctgctccaag gattcctgtc caagctgatg attgttcacc
    50221 agtatttggt agcatttgtc tttctgactc ttttgctggc tgaggaaatg caggttttgg
    50281 aacaatttcg ctaactaatt ccaactgccc ttctatctta gattctgaaa ttgactcgct
    50341 aactgactcg gtgagggatt ctgatacaga ttcggaaata gactcactta ctgactcgga
    50401 gaggaatcca gatacagata cagattcaga ttcagaaatg gattcgctca ctgactcgga
    50461 gatagattca gattcagatt cagaaatgga ttcgctcact gactcggaga tagattcaga
    50521 tacggattct gaaagggact cgctaactga ttctgagtgg gtttctgata tagattcaga
    50581 aatggattcg gataccgact cagagagaga ctcagatgtg gattctgaaa gggatgcgct
    50641 gactgactcg gagatagatt cactaattga ttctacaata gaaattagat gtgaaataga
    50701 ggtagatagt gattctattt ctgatggagt atattccgac gaccttattt gctcagaacg
    50761 cctgatcgag ttagagtgtg agactgattc ggagagggat tcagatgtag attcacttac
    50821 tgactcggag atagattcac tgattgatcc tacaatagaa attagatgtg aaatagaggt
    50881 agatagtgat tctatttctg atggagtgta ttccgacgac cttatttgct cagaacgcct
    50941 gatcgagtta gagtatgata ctgactcaga aatggactcg ctgactgact cggagataga
    51001 ttctgagacg gattctgaaa tcgacccgct taccgattcg gagatagact cagatacgga
    51061 ttctgaaaga gactcactta ccgactcaga gatagattca gatacggatt ctgaaatcga
    51121 ctcgctgatt gactcggaaa ttgattctga tgtagattca gaaatagatt cgctgaccga
    51181 ctcggagata gactcagata cggattctga aagagattca cttaccgact cggagataga
    51241 ctcagagact gattctgaaa tagattcgct gactgactct gagatggatt ctgatactga
    51301 ttctgaaata gattcgctaa ctgactcgga aatggactct gatgtagatt cagaaatcga
    51361 ctcgctgact gactcggaga gagattctga tacagattct gaaagtgact cacttaccga
    51421 ctcggagata gattctgata ctgattcaga gatggactct gatgtagatt ctgaaatcga
    51481 ttcgctgact gactcggaga gagattctga tgtggattct gaaattgact cgctgactga
    51541 ctctgagagg gattcagatg tggattcaga tacggattca cttaccgact cggagacgga
    51601 ttctgagact gattccgaaa gagactcact gaccgactcg gagacggatt cagatgtaga
    51661 ttctgaaatc gactcactta ccgattctga gatagactct gatgtagatt cagaaattga
    51721 ctcgctgacc gattctgaga tagattctga tgtggattca aaaattgatt cacttaccga
    51781 ctcggagata gactctgata cggattctga aatcgattcg ctgaccgact ctgagataga
    51841 ctctgatacg gattcagaaa tcgactcgct gactgactcg gagatagatt ctgatacgga
    51901 ttctgaaagt gactcgctga ccgactcgga gagagactct gatgtggatt ctgaaagtga
    51961 ctcgctaact gattctgaga gggattctga tacagattct gaaagagact cgctgactga
    52021 ctcggaaatt gattcagata ctgattctga aatagactca cttaccgact cggaaatgga
    52081 ctctgatatg gattctgaaa tcgattcaga tgtagattcg gaaacggact ctgagacgga
    52141 ttctgaaagg gactcactta ccaactcaga gatagattct gatacggatt cagaaattga
    52201 ttcgcttacc gactcggaga tggattcaga tgtagattca gaaattgatt cgcttaccga
    52261 ctcagagatg gattcagatg tagactcaga aatggattca ctcactgact cggagacgga
    52321 ttctgaaatc gattcgctta ctgactcaga gatggactct gatgtagatt cagagataga
    52381 ttctgataca gattctgaaa ttgactcact cactgattca gagatagact cagatgtaga
    52441 ttctgataca gattcggaaa ttgactcgct taccgattct gagatggatt cagatactga
    52501 ttctgaaatc gattcgctga ctgactcaga aattgattcg ctgactgact ctgagattga
    52561 ctctgatgta gattcagaaa ttgattcact taccgactcg gagatagact cagagactga
    52621 ttcggaaatt gattcgctaa ctgactcaga gatggactct gatgtagatt cagaaatcga
    52681 ttcgctgacc gactcggaga tggattcaga tactgattct gaaatagatt cgctaactga
    52741 ctcggaaata gactctgatg tagattcaga aattgattcg ctgacagact cggagataga
    52801 ttctgatacg gattctgaaa gagactcact taccgactca gagatagatt cacttactga
    52861 ttctgagatg gattcagaaa tggattcgct gaccgattct gagatagatt ctgagataga
    52921 ttctgagaca gattctgaga cagattctga agttgattcc gaaattgact cgctgactga
    52981 ctcagagatg gattcagatg tagactcaga aatggattca ctcactgact cggagataga
    53041 ctcagatgtg gattctgaaa tcgactcact taccgactca gagatagact ctgatacgga
    53101 ttctgaaaga gaatcgctga ctgactcgga aattgactct gatacggatt cagaaatcga
    53161 ctcactcact gattctgaga tagattcaga tgtggattcc gaaattgact cacttactga
    53221 ttctgagata gattcagatg tggattctga aaccgactcg cttaccgact cggagataga
    53281 ctctgagatg gattcactta ccgactcgga aatggattcg ctgactgact cagagataga
    53341 ttctgagata gactctgatg tagattcaga aattgattcg cttaccgatt cagaaataga
    53401 ttcacttacc gactcggaga tagactcaga tacggattct gaaagagaat cgctgactga
    53461 ctcggagata gactcagaga cagattctga aatggattcg ctgactgact cggagaggga
    53521 ttcagatgtg gattctgaaa tggattcgct taccgattca gagatagatt ctgatacaga
    53581 ctcggaaatt gattcgctga ctgactctga aagggactca gagacggatt ctgaaatgga
    53641 ttcgctgact gactcggaga tagattcaga tgtggattct gaaagagact cgctgactga
    53701 ctctgaaatg gattctgaga cggattctga aattgactca cttactgact cggaaatgga
    53761 ttctgagacg gattctgaaa ttgattcact taccgattct gagacggatt ctgaaattga
    53821 ttcgcttacc gattcagaga tagattctga aagggattct gaagttgatt ccgaaattga
    53881 ctcgctgact gactctgaaa gggactcaga gacggattct gaaatggatt cgctgattga
    53941 ttctgaaact gactcagaga tagattcgct gattgattct gaaactgact cagagataga
    54001 ttctgagacg gattctgaaa tcgattcgct gactgactcg gagatggatt ctgagactga
    54061 ttcggaaatc gattcgctga ccgactcgga gagagattca gatacggact ctgaaagaga
    54121 ctcgcttact gattctgaga tggattctga tacagattct gaaagagact cgctgactga
    54181 ctcggaaatt gattcggata cagactcgga aatcgactca cgaaccgatt cagagatgga
    54241 ctcagataca gattcagaaa tagattcact cactgattct gatagcgatt caactactga
    54301 ctcacgaacc gattctgaca gcgattcaac taccgactca cggactgatt ccgacaagga
    54361 ttcaactact gactcgcgca ctgattctga taccgattcg actactgact cgcgcactga
    54421 ctccgaaata gagttcgaaa ctaaatttga aagggattct gactggctga tcgactccga
    54481 attagacaac gattcagatt tacttgtcga ttcggagtta gacaagagct cagacttact
    54541 taccgattcc gaaagcgact cggatacaga ggtacgaatt gactcagata acgaatgctt
    54601 aattgaagaa gagagcgact cagaagttga tagacgtata ctatgtgagt tttgaataga
    54661 ttcagaagtt gattgcaaga agctatctac cccatcactt ataaatgaag ttttatagcc
    54721 aatcatcatc ccactcaaat tcgtacgacc gccatcctct ttcacagtag catgaacact
    54781 tgctgaagtc ggatgtaacg cagcttgaac atataaagca atattggcta aactcgatcc
    54841 cgaacttgta gtaaacgtgt aggttactgg tccagataga gaaattttct gactccctag
    54901 actatagtta tgcccataaa accttcctgt ataatctaag gtactcaaat ttgttcccaa
    54961 tgtttcacga ctggagaaac tatcatccaa tcgtagtgat acaccattga cttgtagatt
    55021 ttgtggtgct cccatttctg atacaacagc aatatataac cccatatacg cttgcgataa
    55081 atttgtaaca ggattataaa ccactctcca gttaataagg ttgctggttg tatccaatcg
    55141 cccctcgatt aaggaaatct gtttgtctct atattttgca ctagaatctg actctgaaaa
    55201 aaccaagata ttttgatttg ttccagtagc agtcgctcta aaactgactc cattatccat
    55261 acttccagca gttccaagca gttgagtaat acgccctgtc aacacgtttg cagcctgagc
    55321 aatctgtttg ctggcgatat ccagttcttc ctgcgtcatt tctttacctg caagaattga
    55381 ttctgccatt tgccacgctt ggtccgctgc ctgctttgca actatatatt tttgatactt
    55441 cggcgttcca gtctctatcg attctggaac aatgagtgaa cgagattcat taagagaggt
    55501 taaagctata tcgaataatt ggcggtttaa tcctgcaaat ggctcaatcg ccctcacaga
    55561 atcactctcc gattcaagta taaatgtaga atgtgactga agctctgatt cgctaaacga
    55621 gggtgttaaa agagcgcttt ctgacaacga ctctgaaaaa agctctgact gagattctat
    55681 caccgactcc gaaatagatt gactcactga ttgagctatc gattccgaga ctgagaaaga
    55741 ctggatttcc tcgatagatg agtctttatt gtcagttaat acggtactca tctctacagt
    55801 atcggccgtc accaaccgtt ctttctcggt ttcgagagtt gatgtttcat ctgccattac
    55861 agtatccatt acggagtaac ctcccgcaag agtccctaat aacatagcac cttttaatac
    55921 agcgctactt gactgaattc tccgtactgc ctcacttgaa atcgtcttct tttctgattc
    55981 aaatactctt gaaacggttc gaatatgtat cttcgatagg accgttctaa cccaatgctt
    56041 tcccgattta tgcattctaa cacgtgtctt atgtgacacc gccgtaactt gactccgtct
    56101 cctattaatt cctaccattt ttaccttttg ccattttaat gttgtctaat atttctatac
    56161 tacatactat tagcaaactt gtcaactata acaacttctc atacatgttt gtcaatttct
    56221 tttcctataa aaatggtcct ttaaaaagaa gagacagacc acctttaact ctctgtattc
    56281 atcgcttctt cgttcgaaac aacagttatt ctgacttaaa aataatttag agcctgaaac
    56341 tcctgttcca gactcaatca atatagttga taaaatgaca ttaaaaaatc gcatccagca
    56401 acgatgtgct tccaccaccg ccatcaccac ctgcaccgac aatatgattg ccaatgacct
    56461 gagcgaaggt ctcaatgttc aaactctgta catagatttc tccataacca gtaaaggtat
    56521 taacaattcc ttccccagta ccgatagatt gcaagaaacc attttccata tggatattgt
    56581 agtccaaatc acgactccaa gcaaccacat gagcattgtc aatggtgata cttccaccat
    56641 ccaaagttaa cttcttaata gaaccaaacg cattcgccaa aagtgtgcca tgcccctctg
    56701 tagtcatcac aaagagtcca ccctgaccac caaagaaagc tttcccaaca ctctggcgtt
    56761 ccattttata ctgggcagaa ccgtcaaggg caaggaaggc accatcattt agtcgatatt
    56821 gctctgcacc aagttccaag gcaataacct gacctggcgt tgaaggcgca agtgcaattt
    56881 ttccatcgtt actattggaa atggcttgcg tgataaacat agattcgcct gataccattg
    56941 accgaccgat ggcccccatc aatttaccaa aacctgaacc accacgcgca ttgagcttgg
    57001 tattcaaggt cacactcggc gtatggtaga ccatgctccc ttgttgaata taagctgatt
    57061 ctccagcttc caaggcgatt tccaccaaag gaaactgcat attactatcg atagtatatt
    57121 tcatccgatt gtctgacata gttgactcct attttttacg aaatgtacct gttagccaca
    57181 ggattgctat aataaaccaa aaacaagcta taataaacca aatcactttt aactcctttt
    57241 gtattgtttt tataacacaa ttctacaact tgaacaaagc tctgtcaagt atttttgtaa
    57301 aaaaataaag gaatccaaac aatcagattc ccccgtcatc atataacctc tatcatacga
    57361 cccgtatcca catcataaac cgcaccagaa atttcaacat cgtcaggtat aagcggagat
    57421 tgtttcaaga gagcaatatc ctcccgcacg ctttcttcaa tgtctgtaaa aggaagaaaa
    57481 tcctgaccag ccacatccac tcccaaatct cgcttgagtt ggaccgcaaa ttcttcattg
    57541 gtaaaggtct gggcaccgca atctgtatgg tggagcacca cgatttcccg tgtgccgagc
    57601 tgctgctggg aaatgactag cgagcgaatc atgtcctccg tcacgcgccc acctgcattc
    57661 cgcagaatgt gagcatcccc cagagccaag cccaaggcct gcgccacgtg aagccgtgag
    57721 tccatacagg tcacgatagc caccttggtc tttggacgaa gaggcaaatg gtaatcacca
    57781 tgcaggtcaa cataggcctt gttggccttc ataaagtttt gaaaataaga cataggacct
    57841 ccttgtctga tgagaatttc tgaaattttc agaaataggt tagacctagc ttatcacatt
    57901 cccgactatt tgtcgcaaaa agaggagcga ctagctgtca ctcccgaatg attttatcag
    57961 ttgaatactt tctgcaagac ttcgccaatg gtggtcacgc cgataaccgt gatttccttg
    58021 ggcaccttga tacctgtcag ggaattttta ggggcataga ccttggtaaa acccaatttg
    58081 gcggcttcgt taatccgttg ttcaatccga ttgacgcggc ggatttcccc tgtcagcccg
    58141 atttcgccta taaagcactc ttgtgggttg gttggcttgt ccttgtaact ggaggcaagg
    58201 gcaactgcga ccgctaggtc aatagctggc tcatccagtt tgacaccgcc tgctgactta
    58261 aggtaggcat cttggttttg gaggagcagg cctgctcgtt tttccaaaac cgccataatc
    58321 aagctggcac ggttgaagtc caagcctgtc gtggtccgct tggcattgcc aaacatggtc
    58381 ggcgtcacca gagcctgcac ttcggcaagg atagggcggg tgccctccat ggtcacgaca
    58441 atagcagagc ctgtcgcccc gtccaaacgc tcttccagaa agacctcact aggattgagg
    58501 acttcgacca aaccctgcga ctgcatttca aaaatgccga tttcgttggt agaaccgaag
    58561 cggtttttga ccgcccgcaa gatacggaag gtgtgctgcc gctcgccctc aaaataaaga
    58621 acggtgtcta ccatatgctc caaggtccga ggtccagcca gagtaccttc cttggtcatg
    58681 tggccgacga taaaggttgc gatattgttg gtcttggcaa tctgcataag ctcattggtc
    58741 acttcacgga cctgactgac agagccttgc acgctggaga tgtcagggct cataatagtc
    58801 tggatagagt cgataatcag gaaatctggc ttgattttct caatctcagt ccgaatgctc
    58861 tgcatattgg tctccgcata gagatagaac tcgctgtcga tgtcgcccaa acgctcggca
    58921 cggagcttaa tctgctgggc agattcctcc cccgacacat agaggacggt gccaatggta
    58981 gacagctgag tggatacttg caggagcaag gtggacttgc caatccctgg atcgcctccg
    59041 atcaggacca gactgcccgg caccactcca ccaccgagga cgcggttaaa ctcctccata
    59101 ttggtcttag tgcgggccac ttgaatggac gacacttcat tgagcttcat agggcgggtc
    59161 ttctcacctg tcaggctgac ccgctcgttc ttaacttcag cgacttccac ttcctcgaca
    59221 aaggaagacc aggagccaca gttggggcaa cgacccagat acttgggcga gtggtactcg
    59281 caggattgac agacaaaggt tgtttttttc ttagcgatgg tcatttcctc ctatagagtg
    59341 tattctagga tttcgcagta ggctatagtt tctttaggaa caaactggcg tatcagcata
    59401 ccgtgacaga cgataacgat tcggtcatag gctttgtatt tttcaagggc ctgtaaaaat
    59461 cgctctctca tctccgcagc agtctcatag cgaacaggtg aagactcagg caccgctccg
    59521 ctattttcca aaaataatcg atgagctaag acagcctcat cttgactagc attttgccct
    59581 gtcatatctg gtcgccactc atgaaaaaag ggttcgacca gaagaggtag ttgctgggca
    59641 tgagcaatgt aggtcgcagt ctccaaggcc cgtgtgacgc ttgaagcgat aaccacctga
    59701 gcctgagcaa aaacaggact gttggcaact tccttagcca aagcccttcc cttttcagtc
    59761 aggggagcca gatcccgtcc aaaacctgca tacagccgag gattatcatg ctggtcaaac
    59821 atactgtagt cgggttcgga atgccgcaca aagagaatct gcatagtagt ctatttccct
    59881 gtcgagccaa atccacctgt ccgaacgccg tcggcctggt ctccgtcagc caaaaggaag
    59941 ggtgcaaaaa cagcctgtac gattcgctcg ccagcttcca ccacgacggt ttcctcggta
    60001 atatttcgca tctgggcaaa gatatgacct tcattggctg gattgccata gtagtcgccg
    60061 tcgataaccc caaccgagtt aatcaggacc aagcccttct tgcgagggtt ggacgaacgg
    60121 tcataaagat agaggacctc attggcctgc atataggcct tgacacctgt tggcaccagc
    60181 ttaatctcac ctggctccaa gctgacagtc tccgcagctt tcaggtcata acctgctgca
    60241 tgagcggtct cacgttttgg caataaattt tcatcagtaa actggctgac cagttcgaat
    60301 ccacggagtt tcatagtaat tccccttcaa tttcttcata cataatacgc tctctattat
    60361 aatttattcg cagtctaaaa gcaaaacccc aacctcttgg ttggagtttt tgcgtttatt
    60421 caaacacaaa ctggttgtgg tagagttcgg cgtagaagcc attgagttta aagagctggc
    60481 tgtggttgcc ttgctcaatc acttttccgt ctttgaggac gatgttcaac cctcaaatct
    60541 gactttattt ctccggtatg acccaaaaca aatagtaagt gatgaagatt gttaatagtc
    60601 ccagtcctat tttgaccaat aaaataggag ccaaccagat agaaattgcc atgagtaagt
    60661 aaatttgcca gatgatttgc ttttttcgtt tgcgggaaat ggatttggtc tcaacgtaat
    60721 cagctacgta aaattgataa atttttgtat tgcgtagcca tttttcaaac ctttttgaac
    60781 ttctcgcaaa gcaaaaacca gccaaaagta aaagaggggt tgtcggaact atcggtaaaa
    60841 caatcccaat gacaccaacc atcaaactaa caaaaccaaa tactagatag aatattctct
    60901 gcatactaat attataccaa aagaactcgt gaatttttga acaattttat cacattttca
    60961 gaaagcgctt gcattttatt ggataaaagg gtatgataaa ggtaccaaat ttaggaaaga
    61021 gagaagacgc tatgaaactt ctaggactgg tcggaacaaa ctccgctcgc tcaaccaacc
    61081 gcaaactctt gcagtacatt gaacagcact tcgctgataa ggcagatatc gaactggttg
    61141 aaatcaagga actcccaatc ttcaataaac cagccaatcg agaattacca gaaattgtca
    61201 aagaattggt cgcaaaaatt gaggctgctg acggagtcat catcggaact cccgaatatg
    61261 accactctat tccagctgtc cttatgaatg cccttgcttg ggtatcatac ggtgtctatc
    61321 cactattaaa caaaccagtt atgattactg gtgcttctta tggaacactt ggttcctctc
    61381 gtgcccaact acagctacgt caaattctca acgctcctga actcaaggcc actgtcttgc
    61441 cagatgaatt tttattgtca cattccttgc aagcctttga tgccaatggg gagctcattg
    61501 atttagaaac tagtcaaaaa ctggatgcca tctttgatga cttccgcctc tttgtcacca
    61561 tgactagcaa gctatctaac gcaaaaaaat tactccaaaa agaagctgaa aacttcgatt
    61621 gggaaaacct gtaagagagg aatatactat gaaatttgtc ggaattgttg gatcaaatgc
    61681 agatcaatct tataaccgca tgctattgca attcattcaa cgccacttta aagtgaagtt
    61741 tgaactagaa cttttggaaa tcaaagatgt tccaatgttc aatcaggacg aagaccagtc
    61801 tgattgtttt gcaattcaat acctttacaa caaaatcacc cgtgctgacg gggtcattat
    61861 tgctacccct gagcacaatc ataccattac ccctgccctt aagagtactc tggaatggct
    61921 cagctttaat ttgcacccat tcgaaaataa accagttatg attatcgggg catcttacta
    61981 cgatcaagga acttctcgtg cccaagttca cctacggaaa attttagatg caccaggtgt
    62041 caatgcttac acactaccag gtaatgaatt cctccttggt aaggccaaag aagcttttga
    62101 cgataagggc aatatcatca atgaaggcac cgtgaaattc ttagaaagct gtctagacaa
    62161 ctttatcaag tatgtcggtg ttgtatccaa attgaaaaaa ccaaaaccaa tcgcaccaga
    62221 agatttagac tgtaccaaac caatcgcaac gaccatcact ggtgtggatc cagatgatcc
    62281 agattggcta gaaaaggctt ctaaattggt taacgcagtt gagggagaca cctatgttaa
    62341 actggacaat ggtctgttga ccgttaacca actcaatatg ttcctcaatg cgatgccatt
    62401 tgaattgacc tatgcagatg ataataacca gttcctctac tacaacaata gtcaccaaga
    62461 acctgatacc atgttgggta aacgggtact tgctcaagta ggaaatcgcc tgtcaactgt
    62521 ccacggtacg ctacctcctg cccgtatgaa gaatgttgaa tgggttgtcg gtaccttgcg
    62581 taatggtaac caggaatatg ttcgtaccat tgtacccggt acccctgctg aaattatcaa
    62641 cacccacaac taccaagcta tgtactatcc tgacggatcc tacgctggta tcaatgaaat
    62701 tatctttaat ttcaaaccat ggctagattg gtatcttgaa gctactggtc aacgcttggt
    62761 tggtggttcg ggaactgccg cagctcctgc acatgttgac gcaacctctg gtgcatcaga
    62821 tgctggtagt gcccctgcta cttccacacc gacagatgca gattctggtg catccgctca
    62881 ctaatcgttc acatatagtg gctgggaaga aagcccagca cctcttctca gagttcgtgt
    62941 caacatctca gcgcagtggt tgattggcag atttgttcgt tttttacact ccaaatctgg
    63001 cctaatcaac tgtgcggggg tgggaagacg aactcttttt agactggtcg agttctttcc
    63061 aactcccata tttttcaaac aaaacattga taatgatttt acaaggagtt cctatgtcac
    63121 catttcaaga aaaaatttca gctgcagttt caaaaaaaga agcccttttt gacgaaagtc
    63181 taggccgcta tgccttgcgt tctatgtatg caggagccta cctgactatg tcaacagctg
    63241 tcggtattat cggagcagac gttattgcca gtcaatttcc aagtttgtcg cgctttgtct
    63301 ttaccttcat ctttgctatt gggctggttt ttgtgcttat ttttggtggt gaattagcca
    63361 cttctaacat gatgtatctc acaactggtg cctactataa gcaaattagc tggaaaaaag
    63421 tgacacagat gctgctatac tgtactttct ttaactttgt aggcgctact attctagcct
    63481 ggctcttcaa tcagtccttc tcctacctca atctctctga taagagcttt gtcgtcaatg
    63541 ccgttaccat caaacttgga aaatctgact ggagcaattt tattgaaggg atcacggcta
    63601 atatgtttgt aaatatggca atccttggct tcatgctcat caaagaacag tctgctaagt
    63661 tctttgtcat catttcctcc atttttatgt tcgttttcct catcaatgag catctggtcg
    63721 ccaatttcgc atctttcatg ctcctagctt ttaacgctac tcgaagcaat gtcgaagcct
    63781 tcaatatgat caatatcctt cgtcaatgga ttgtggtctt ttttggaaat tggctcggag
    63841 ccggtctctt tatcggtatc gcctacgctt ggctcaatca aaccaaaacc aaccatattg
    63901 aacaataagc ctaccacaaa aacagccaag ataaaccacg tcctaaacgt ttaaggattg
    63961 tggtctgctt atcttggctg tttatttttc tatatattat tcaaacacaa actggttgtg
    64021 gtagagttcg gcgtagaagc cgttgagttt gaggagctgg ctgtggttgc cttgctcgat
    64081 tacctttcca tctttgagga cgatgatttc gtccgcattg aggatggttt tgaggcggtg
    64141 ggcaatgacg aagctggtcc gtccagcgat aatagcctcc atagcctttt gaattttggc
    64201 ttccgtcacc gtatcaacgt ttgaggttgc ttcgtccaaa atcaagactt gtggatctgt
    64261 caagagcgta cgggcaatgg aaatcaactg tttctgacct gtcgagaaga cattctcatc
    64321 atcagtcaca aaggtttcat agccctctgg caagctcatg atgaagtcgt gaatatgggt
    64381 ggcacgagct gcggtttcca ccatttcctg cgaaatgctc tcatcaccaa agcgaatatt
    64441 gtccgcaata gtgcctgaga atagcactga ctcctgcaag acgataccga ccttatcccg
    64501 caagctgtcc aagtcgtatt cccgaatatc acgaccatca aaagccacgc taccaccatt
    64561 gacatcatag aagcggttaa tcaagttcat aatggtagtc ttaccagatc ccgtcggacc
    64621 aacgaccgcc accattttac ccttaggagc agagatagac accttgtcca aaaccttctg
    64681 acctggcagg tagccaaagt caatgtcctt gatttcaaca ccttctttta attcggtaaa
    64741 tagcggagcg ttttgaggac gaacttcctc aggctcatca aacatttcct gaatacgatg
    64801 agctcctgtg aaagctagct gcaattctgc ccagctggca gcaacctgca tgattggctg
    64861 gtaatactgt tgcgaatact gaacaaaggt caccaccaaa ccaagtgcgg cagctgtttc
    64921 cagcgagcta tcgttgagaa caatgctaga gcctgcaaag ataacaatgg ccgtattgac
    64981 caagctcata ccattcataa acggaaagag aatcccacca aacaagcgac ccttgaaagt
    65041 tgtgcgacga acttcttcat tgagttccaa gaaaccatca atcgtctctt cctgcacacc
    65101 ttgtacaata atcgcttttt gtccagaaat tttctcatcc atgtaggcat tgagcttaga
    65161 taccgcagcc tgttgcttat cagtatattt ccgtgatagg cggatgataa cgaccaaggc
    65221 aatcaaggca actggcgttg aagcaatggt caccaaggcc aagcgagtat cctgacggaa
    65281 catcatgatg accataccaa cataaagagc gatgttagtc accacttggg tcaaggactg
    65341 gttaaaagcg ttttggatat tgtccaaatc actggtaaaa cgagaaagaa tatccccgtc
    65401 cttgtgacta tcaaagaagg caactgtcaa acgttccagc ttgccaaaca agcccttacg
    65461 catacggttg gtcgaatgag ccacgatacg cgtgaagagg agagtgtaaa tcaaggaagc
    65521 cacaaccgtc gccgcatagg caaagaatag attgagcata accccgttaa aatcagacag
    65581 gtctggctga aagtcagcct gaccagtttg attggccatg aagtaagcct gcccgatttt
    65641 ccccatctcc gcaatggcat ttccaaggaa aacaggtgtc ttaacctgca agtaggtcgc
    65701 tgccacaatg gctagaaaaa tcacagcaaa ggacagttta tagcgtttga aataaaacca
    65761 gaaaaaacgt aaagttttca tctattcttc cctccctttc tgtgtttcgt agatttcacg
    65821 gtagacatcg ttcgtagcta ccagctcggc atgagttcct tgtccgatca gacgaccctc
    65881 gtcaagaacc aaaatcttat cagctttgac aacagaagaa atcttctggg caacgatgac
    65941 agtggttgtc cccttcaaat catggttgag ggcctcttgg actagtttct cagacttggc
    66001 atccagggca gaagttgagt catccaagac caagactttc ggctcgccaa tcaccccacg
    66061 agcaatggac atccgctgct tctgaccacc agagaagtta tttccacgtt cttctacttg
    66121 gctctcatag gtatcatcca agcggtcgat aaattctttt gcttgggcaa tacctgcggc
    66181 ccgctccaat ctttgcaaat cagcaccagg tgccccttga cgcaggttgt ccgcaatggt
    66241 tcccgagaag agaatagcct tttgcaagac aatcgatacc gtatcacgca gggtgttctt
    66301 actgacttct ttcaagtccc gaccaccgat ggataccgtt ccttcttgcg ggtcaaacaa
    66361 acgcggaatc agttgagcaa gagtggattt acccgcacca gttgcaccaa ccacaccaac
    66421 catttgccct ggctcaatct caaaagagat atttttcaaa gtcggctctg tatcatgtgg
    66481 ataggtgaag ctaacattgt caaagacaat cttaccagtc aattcttcat ccgccacatc
    66541 cttgaaggtc atagcaggtt ctgtatccaa gacctcgctg atccgcttaa tagaaatcgc
    66601 cgcacgagaa gcctgcatac ccatgaagct agtcatgata atggcaaaca tgatttgcat
    66661 gaggtagctc ataaaggaag taaagccacc aactgcttcc atgttggttt tcaacatccc
    66721 agacaccaag tagagggatg caaaaatcgc catataagag ataaacatca tcaagggttg
    66781 caagatagca aaaccatagc cgataaagag attgagatcc aagagttcat tggatacttt
    66841 cttgaacttg gcatactgat ttttttcttg tacaaaggac ttgaccacac gaatcccacg
    66901 caggttttct ttggcaatgc tattcatctt gtccatgagg gactggaatt taccaaaacg
    66961 tggtcccatt tgccccatga caaccgccat aatggccata atcaagacca ccatgagaat
    67021 aatcatccac cagagttctg gcatggtccg caccgccatg acgaaggctc caacaaacag
    67081 caatggaacc cgcatcaaca ctgtaaagag catcatgaca aggttctgga tttgattgac
    67141 atcgttagtc atccgaacaa ccaggttccc tgcgttaaac tcttcgatat tagcataaga
    67201 gaagctttgg atcttccgaa aggtcttctc acgaatatct gcagatactc cctgagaaat
    67261 ctttgccgct gaaatggtat tgacaagccc tgccaaaaga ccaattccag caataatcag
    67321 cagtaatttg cccacacgaa caatttcatc tttgtcattg gccaagactg ctgtcaagac
    67381 atcctgcaaa taacttggtt gcatcaaggt cgttgctacg acaatggacg tcaacaagac
    67441 cgatgccaag gcataccatt tgtaacgtaa aatggcttct ttaaacatga ttcttctcct
    67501 tatagcgttg aatatttact tttaattgat tggccacctg tctgatcaaa tcaaattctt
    67561 ccttttgaat acctctaaaa agagaatggt gcatctcctc atggaaggat tttaggtgac
    67621 aaatcttgct ccgacctttc tctgtcaaga ccaactgctt gtaacgtcta tcaaactgag
    67681 atggcaaaac ctgaataaag tcatttttct ccattcgctt aaccagattg ctggcaacgg
    67741 atttggaaat tttcaactcc gcttcaatat ctttgacaaa ggtttcaagg tctgaccgtt
    67801 ctgctatgaa acgcaaagcc cacccctgtg gtccagctag gtgctccaca tcatattcct
    67861 tggcaatcgt ttcactaatt tgttcaattt gattgagtaa attccgaaaa tctgcaatag
    67921 tatgtcccat gacagctcct ttctacgaaa ataattacca tgagaactat tatagttctc
    67981 ttaagaacta ttgtcaatta tttcgtttgc tcttttctga aaatattttg ttatttcagc
    68041 atc
//
LOCUS       DBNFCX010000002        46602 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.002, whole genome shotgun sequence.
ACCESSION   DBNFCX010000002 DBNFCX010000000
VERSION     DBNFCX010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 46602)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 46602)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..46602
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.002"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(128..1852)
                     /locus_tag="AC1PJC_000068"
     CDS             complement(128..1852)
                     /locus_tag="AC1PJC_000068"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001137776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 protein"
                     /protein_id="HIP6619122.1"
                     /translation="MSRLVDLRKKPYCLNDEQITWVEDTLAHLTDEEKIGQLFVNLFF
                     FGGDAFSGNNLSNQELMNRYHIGGARYMNGSPEQVQGLINELQSYSKVPLLVAANCDS
                     GGDGAVKGGTYISSGAQSEASRDPRIPYLAGLVSAREETALGVNVNFDPCVDIVQNWR
                     NTIVNTRAYGTNADDVIAYTSAYLEGLTAERDVIQCIKHFPGDGTEERDQHLVLGVNE
                     LSPEEWDKSFGRVYRHHIEAGVEMIMAGHIALPYYQQRLNPTLKDEDILPATLAPELI
                     QDLLKEKLEFNGLVITDASHMLGMTAAMRREDYVPAAIAAGCDMFLFFNNLEEDFEFM
                     LNGYRKGVITEERLHDALRRILGLKAKLNLHIKQAEGTLLKSADELAIIGCEEHLAWQ
                     REAADKAITLLKDTQKNFPISPETHRRIRLYYLEGEKEGIMAASTEVVDNLKAALEAR
                     GYEVTVNDGTTRIKGKTLQYREEVDLALTVANVIGYGAQNNYRIQWKTAMSNEVPWYV
                     HEVPTIFVSLNYTTHLHDVTMVKTAINAYHHNKNTIESLIDKLEGKAAFYGVPNENVW
                     ANKWQAKL"
     gene            complement(1863..3653)
                     /locus_tag="AC1PJC_000069"
     CDS             complement(1863..3653)
                     /locus_tag="AC1PJC_000069"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 protein"
                     /protein_id="HIP6619123.1"
                     /translation="MTHLVDLRKKPYSLDEEAISWIEETIAQMTLDEKIGHLFVNMGS
                     QRTEDYLTGVLNDYKIAAVRYNPGPAADIWEQNYILQTKSKIPLLIAANTESGGNGAV
                     TDGTKIGDEIKIAATTDPHYAYEMGKVAGLEAAAVGCNASFAPIMDLSRNWRNPIIAN
                     RTWGANVDQVIELSKEYMRGIMEHGIVPFAKHFPGDGIDERDHHLSFASNPMTKSEWM
                     ETFGRIYGEMADAGLPGIMAGHIHLPNVEKEMHPERELDDMLPASLNKTLLDELLRGE
                     LGYNGAIVTDASHMIGMTASMSRRELLPTAIEAGCDLFLFFNDPEEDLQWMKEGLENG
                     LLSEERLHDALRRTLGLKAKLGLHLFEGRRQEIMLPKEEALALIGRDEAKQLAKEVAD
                     KAITLVKAKQEGIFPVNPERYKRILLVEVDGYKGGFGAMINAGKKRAADTLKELLEAR
                     GHQVSIWENTEARIAKLPEEERPAAIANVYASKRPIAEITDNYDLIINLVDVNSGGTT
                     QRIIWPAAKGTPDQPFYVHEIPTIVVSVQHPFALADMPQVATYINAYDGLPVTLEALV
                     AKLAGESDFTGVSPVDAYCGLLDTRIWRGK"
     gene            complement(3702..4502)
                     /locus_tag="AC1PJC_000070"
     CDS             complement(3702..4502)
                     /locus_tag="AC1PJC_000070"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HIP6619124.1"
                     /translation="MMKMEYVFCVDSDGCAMDTMTYKHKLFFGPLAAEVFGVEDKEPF
                     LAEWNRVNLYSRERGINRFVGLVKGLEFAGVTGIDNLKNWVATTDSLSNASLEKLIEE
                     RPSKDLELALEWSTQVNQAIKHYSGPVLAFIGVHKGLEKLSQLGKVYVVSSANKEAVE
                     EEWTDQGLLDFVTELYCQDRGKKEDVIELLIEEGYCPDKIMMIGDSPGDLKAAELNGV
                     HFYPILVGREMQSWADLTETIADEFAHQAFTDEKETELTQAFWNNLDD"
     gene            complement(4502..5341)
                     /locus_tag="AC1PJC_000071"
     CDS             complement(4502..5341)
                     /locus_tag="AC1PJC_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HIP6619125.1"
                     /translation="MTRVIEFKDKVVVITGAGGVLCGYLAKEFAKAGAKVALLDLNEA
                     AAQVFVDEIAAAGGVAKAYKSNVLSKENLEEVRQQVLADFGPVDILINGAGGNNPKAT
                     TDNEFHEIGLPAETKTFFDLDEAGINFVFNLNYLGTLLPTQVFAQDMIGRSGANIINI
                     SSMNAFTPLTKIPAYSGAKAAISNFTQWLAVHFSKVGIRCNAIAPGFLVTNQNRGLLF
                     DESGQPTARANKILTNTPMGRFGEAEELVGGVFFLADENLASFVNGVVLPIDGGFSAY
                     SGV"
     gene            complement(5343..6443)
                     /locus_tag="AC1PJC_000072"
     CDS             complement(5343..6443)
                     /locus_tag="AC1PJC_000072"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008927 - mannonate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006064 - glucuronate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HIP6619126.1"
                     /translation="MKMSFRWYGKKDPVTLDQIKAIPGMQGIVTAVYDVPVGQAWPLE
                     NILELKKMVEDAGLEITVIESIPVHEDIKQGKPNRDALIENYKTSIRNVGAAGIPVVC
                     YNFMPVFDWTRSDLHHPLPDGSTSLAFLKSDLAGVDPVADDLNLPGWDSSYSKEEMKA
                     IIENYRQNISEEDLWANLEYFIKAILPTAEEAGVKMAIHPDDPPYGIFGLPRIITGQE
                     AVERFLNLYDSEHNGITMCVGSYASDPKNDVLAMTEYALKRNRINFMHTRNVTAGAWG
                     FQETAHLSQAGDIDMNAVVKLLVDYDWAGALRPDHGRRIWGDQTKTPGYGLYDRALGA
                     TYFNGLYEANMRAAGKTPDFGIKVKTVGNKES"
     gene            complement(6457..7857)
                     /gene="uxaC"
                     /locus_tag="AC1PJC_000073"
     CDS             complement(6457..7857)
                     /gene="uxaC"
                     /locus_tag="AC1PJC_000073"
                     /EC_number="5.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008880 - glucuronate isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006064 - glucuronate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronate isomerase"
                     /protein_id="HIP6619127.1"
                     /translation="MSFNDKNFMLKNEPAKELYGKIAELPIYDFHCHLDPKEIFEDKV
                     YEDIVDLWLGGDHYKWRLMRANGISEEEITGSASKLDKFKAWARTLERAFGNPLYHWS
                     HLELRQVFGVEELLTEENAERLYHQLNAYLQEHQVSPRKLIADARVTFIGTTDHPLDS
                     LEWHKRLAEDSTIDTVVAPTFRPDEAFIEHRNFNPFIKRLEEVTGVTVKDFASFVEAL
                     GQRVSYFAQHGCRASDISFTAISYEEASLEELDDILLARLAGKEAGQSSINKWQTAIF
                     RELCRLYKKHGFVTQVHFGALRNNHTGLFEKLGADIGVDSIGDQTYLTVNLNCLLDNL
                     VKEKALPKMIWYNLNPSYNIALANTLANFQSNEEGLRSQLQFGAGWWFNDTKLGMIDQ
                     MNAYAEQGMLANFVGMLTDSRSFLSYQRHDYFRRILATYVGQWIVDEEVPEDYNRLGQ
                     LVEAISYYNAKEFFEQ"
     gene            complement(7859..8479)
                     /locus_tag="AC1PJC_000074"
     CDS             complement(7859..8479)
                     /locus_tag="AC1PJC_000074"
                     /EC_number="4.1.2.14"
                     /EC_number="4.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008675 -
                     2-dehydro-3-deoxy-phosphogluconate aldolase activity
                     [Evidence IEA];
                     GO_function: GO:0008700 - (R,S)-4-hydroxy-2-oxoglutarate
                     aldolase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HIP6619128.1"
                     /translation="MLKQLKENYFFAVIRGKDEEDAKEIARHAILGGIRNIEITFSTP
                     NAATVIKELQEEFSDDSSVVIGAGTVMNLKLAQAAIDAGASFLVSPHFDKAIQDLAQE
                     AEVFYFPGCATATEIVTASQAGCPIIKLFPGGVLGPGFIKDIHGPVPQVDLMPSGGVS
                     VENVADWKKAGACAVGVGSALASRVQAEGYESVTTIARSFVAALEG"
     gene            complement(8602..9318)
                     /locus_tag="AC1PJC_000075"
     CDS             complement(8602..9318)
                     /locus_tag="AC1PJC_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001118301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FadR/GntR family transcriptional regulator"
                     /protein_id="HIP6619129.1"
                     /translation="MAKPLVEKASERLLELILERGYEVGDKLPNEYELAQDLEVGRST
                     VREAVRSLATRNILEVRQGSGTYISSKKGVSEDPLGFSLVRDRVKLTTDLFEVRYLLE
                     PRIAERVAQFASDEDITRLEEIVFAIEEAVAAGDTKHLELDVKFHCMLAEMSGNLAMT
                     SLMPVINQSIHLINENYSNRQMKSDSLQAHRNILMAIKQRHPVAAYDSMLAHIISVRQ
                     VVLSEWFDKDMTLHGLNDHK"
     gene            complement(9364..11163)
                     /gene="uidA"
                     /locus_tag="AC1PJC_000076"
     CDS             complement(9364..11163)
                     /gene="uidA"
                     /locus_tag="AC1PJC_000076"
                     /EC_number="3.2.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-glucuronidase"
                     /protein_id="HIP6619130.1"
                     /translation="MLYPIQTKTRSVYSLNGIWAFKQGNNDVHSLLDTDEVMVVPSSF
                     NDVVVDKAKRRFVGDNWYELMVALPVVADDEELVVRFGSVTHQAKVYADGQLIGEHKG
                     GFTPFECLIPSNLYDADQFRLTVCANNELNYTTLPVGNYSEEVDENGQIVKTVKENFD
                     FFNYAGIQRTVHLYKRPKNRIEDIVIRTELNQDLTQAVVKVDVKTVGQYDSIRVSILD
                     QEGQEVGLLENGQMVIEHPRLWEVLDAYLYTAKVELFDGENLLDTYSEQFGIRSVAVE
                     NGQFFINGKPFYFKGFGKHEDTFINGRGFNEAANLMDLNLLKDIGANSFRTSHYPYSE
                     EMMRLADRLGIVVLDEVPAVGLFQLFNAALNLTGDSEEVKNTWEVMQTKEAHELVIDE
                     LIARDKNHPSVVMWVVANEPAGHEKGARAYFEPLIQRMRDRDPSKRPVTLVNIMTATP
                     DKDEVMDLVDVVCLNRYYGWYVAHGDLKAAEKGLRQELEIWQKLYPDKPILMTEYGAD
                     TLPGLHSMWDIPYTEEFQVDYYDMNHRVFDSIPNLVGEQVWNFADFETTVGIIRIQGN
                     HKGLFSRNRQPKQIVREIKKRWTAIPNYHYKRK"
     gene            complement(11179..12207)
                     /locus_tag="AC1PJC_000077"
     CDS             complement(11179..12207)
                     /locus_tag="AC1PJC_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HIP6619131.1"
                     /translation="MKKILAFGEVLLRLSPPHYQTLTQATSLDCQFGGSELNVLASLA
                     QLGHSVELVTALPKNEVGKMAEHFLFARQIGQKYVIRKEGRLGLYYYQKGFSLRPSQV
                     TYDRDYSAFSLSKEEDYDLEGMFDGIDWFHVSGITVALNPDIYRLAFRLMEMAKGQGV
                     KVSFDLNYRESLWSSFEEAREKLSPFVGLADICFGLEPIQLFNESGKDVKDELGLKRP
                     YENKEVLLAVVKGLAETYSLQSLAFTQREMTYNNEYLLKAYLYQDGILYETEKESIQV
                     LDRVGTGDAFTAGIILGYLQEKTPQEIVDLGMASFQFKHTIEGDINVISQSDIDLLLK
                     KGSREIKR"
     gene            complement(12263..13816)
                     /locus_tag="AC1PJC_000078"
     CDS             complement(12263..13816)
                     /locus_tag="AC1PJC_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIP6619132.1"
                     /translation="MEKHVEQRVEDVTYNKAKLWQIILFAMNNSSTNIYLVAFTFVTY
                     LSTGVLGLAALFVSQLMGYIRIFDGFIDPTIGVIIDKTDTKFGKYRPILVLGNIITAA
                     SLFMMLGLSGVSESLRLPLFILVLIIHKIGYSLQQTITKAGQVALTNDPKQRPIFNIV
                     DGIATTVLMTGSQVVVSGTLVPKHGGFTPSFFQELFLGVVVISAVLGILAIIGIWEKD
                     NKKYFGLGEKTQETKLKDYWKVIKGNKPLQVLSISAAFVKFVAQLFGDSVIGVMLYGI
                     IFGDYALSGKMSMLLILPGILVTVGAAQLARRKGLRFAYITALQLGIAGLVTLAAMLF
                     SAKPGMLDLTNWNLYTIGFFVVYIIARYASSAPSGLVLTMGADITDYETSVSGRYLSG
                     MIGTIFSLTDSIASSFAPMVVGFVLAGIGFGKEYPTVETAFSTDLRIALIVLLTVIPA
                     AVLSVSLFLMKFYKLDREEMARIQEKIHVMKAAKDEERVRAIAKNVPLSDMDYVDVTQ
                     YKVDQYDDK"
     gene            complement(14003..14842)
                     /locus_tag="AC1PJC_000079"
     CDS             complement(14003..14842)
                     /locus_tag="AC1PJC_000079"
                     /EC_number="3.1.30.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HIP6619133.1"
                     /translation="MAKKNVKKQAMSLLSLLATIVVVAGGYLLSDNKSSNVADYSYYV
                     NQSKASESTPSQELASSVLTEDVKKQLGNSIEWNGAGAFIINGNQTDLDASVASVPYG
                     DNKTKTVQGETVPTVANALLAKSTRQYKDREETGNGRTSWTPAGWHQIHDLTGEYDHA
                     VDRGHLLGYALIGGLSGFDASTSNPKNIAVQTAWSNQANDQTSTGQNYFESQIRRALD
                     KNKRIRYRVTLVYAESEDLVPVGSHLEAKAADGSLEFNVFVPNVQSGLSINYHSGEIV
                     VNQ"
     gene            complement(14872..15063)
                     /locus_tag="AC1PJC_000080"
     CDS             complement(14872..15063)
                     /locus_tag="AC1PJC_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HIP6619134.1"
                     /translation="MDKDNLSYVGKNLILVAVVLLIAILVFVLGLMVGYGVIGDGDNV
                     FAVLSPAKWQELIGKFTGK"
     gene            complement(15056..16339)
                     /gene="murA"
                     /locus_tag="AC1PJC_000081"
     CDS             complement(15056..16339)
                     /gene="murA"
                     /locus_tag="AC1PJC_000081"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0019277 - UDP-N-acetylgalactosamine
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HIP6619135.1"
                     /translation="MDTIIVTGSKNGLKGQVEIEGAKNAVLPLLAATVLASQGQTKLT
                     QVPILSDVYTMNNVVRGLGVRVKFDEETKTIDIDATGKLGSETPYKYVSQMRASIVIL
                     GPILARNGYAKVSMPGGCTIGSRPIDLHLKGLQAMGAKIKQRAGYIEASAENLQGAHI
                     YLDFPSVGATQNLMMAATLAQGTTVLENAAREPEIVDLAIFLNKMGAKVKGAGTETIT
                     ITGVEELTGAEHQVVQDRIEAGTFMVAAAMTGGDVLVKDAVWEHNRPLISKMLEMGVE
                     VTEEAEGIRVRSQVDKLKPVTVKTLPHPGFPTDMQAQFTALMAVAKGESTMIETVFEN
                     RFQHLEEMRRMDLHSEILRDTAIITGGLALQGAQVMSTDLRASAALILAGLVAEGETI
                     VGKLTHLDRGYYRFHEKLAALGATIERVSGEDENG"
     gene            complement(16363..16587)
                     /locus_tag="AC1PJC_000082"
     CDS             complement(16363..16587)
                     /locus_tag="AC1PJC_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1146 family protein"
                     /protein_id="HIP6619136.1"
                     /translation="MVISILQFFSHILFIYLAHHLLVTTVDWSRWLKVTGDNQRKINL
                     LILFLAIALGYLVSTFFLELLMMGRSFANM"
     gene            complement(16647..17063)
                     /locus_tag="AC1PJC_000083"
     CDS             complement(16647..17063)
                     /locus_tag="AC1PJC_000083"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045259 - proton-transporting ATP
                     synthase complex [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HIP6619137.1"
                     /translation="MGQMTVQIVTPDGIKYDHHAAFVLVKTVDGEMGVYSGHEELIAV
                     LEIGEMKVRRVDDENHVDWIAVNGGIIEVNKDIITVISDSAERERDIDISRAERAKLR
                     AERELEEAQTARNIDMEMRATVALQRAINRIRVGKH"
     gene            complement(17073..18479)
                     /gene="atpD"
                     /locus_tag="AC1PJC_000084"
     CDS             complement(17073..18479)
                     /gene="atpD"
                     /locus_tag="AC1PJC_000084"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016398931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045259 - proton-transporting ATP
                     synthase complex [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HIP6619138.1"
                     /translation="MSSGKITQVVGPVVDVAFAAEDKLPEINNALVVYKNDDSKQKVV
                     LEVALELGDGVVRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDL
                     EESFPADFEREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVG
                     KTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEP
                     PGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQP
                     TLATEMGQLQERITSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQ
                     LGIYPAVDPLASSSRALSPQIVGEEHYTVAMEVKRVLQRYQELQDIIAILGMDELSDE
                     EKTLVGRARRIQFFLSQNFNVAEQFTGMPGSYVPVAETVKGFKEILDGKHDHLPEDAF
                     RNVGSIEDVVAKAAKMKF"
     gene            complement(18499..19377)
                     /locus_tag="AC1PJC_000085"
     CDS             complement(18499..19377)
                     /locus_tag="AC1PJC_000085"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000301235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045259 - proton-transporting ATP
                     synthase complex [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HIP6619139.1"
                     /translation="MAGSLNEIKSKIASTKKTSQITGAMQMVSASKLAKSEQLAQSFQ
                     IYASKVRQITTDLLRGELMASDTSNPMLIRRPVQKSGYIVITSDSGLKGSYNSSILKA
                     VMGMIEQDHDSKDEYEIIAIGSMGADFFRARGITPVFELRGLADNPSFEEVQKIISKS
                     VEMYKNELFDELYVCYNHHVNSLTSQVRVQQMLPVEDLDHNEADGYTATFELEPNREV
                     ILEQLLTQYAESTIYGAILDAKTAENAAGMTAMQTATDNAKNVINDLTIQYNRARQAA
                     ITQEITEIVAGASALE"
     gene            complement(19389..20909)
                     /gene="atpA"
                     /locus_tag="AC1PJC_000086"
     CDS             complement(19389..20909)
                     /gene="atpA"
                     /locus_tag="AC1PJC_000086"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011889023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045259 - proton-transporting ATP
                     synthase complex [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HIP6619140.1"
                     /translation="MESGVLLINAQEISALLKQQIEGFQPDFDYTETGVVTYIGDGIA
                     RAQGLDNAMSGELLVFENGTIGMAQNLETNDVGIIILGQFTDIREGSVVRRTGKIMEV
                     PVGSALIGRVINPLGQPVDGLGEIRTSKTRPIEYPAPGVMQRKSVNEPLQTGLKAIDA
                     LVPIGRGQRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLR
                     QYGALDYTIVVTASASQPSPLLFLAPYAGVAMAEEFMYEGKHVLIVYDDLSKQAVAYR
                     ELSLLLRRPPGREAYPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAY
                     IATNVISITDGQIFLKDDLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRIDLA
                     SYRELEAFTQFGSDLDAATQAKLNRGRRTVEVLKQPLHKPLPVEKQVLILYALTNGFL
                     DSVPIDDILAFEEELYAYFDLHYDGLLDVIRTTKDLPDTDELNAAIQAFKDQSVFK"
     gene            complement(20913..21446)
                     /locus_tag="AC1PJC_000087"
     CDS             complement(20913..21446)
                     /locus_tag="AC1PJC_000087"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HIP6619141.1"
                     /translation="MNARENAIVQKYALSFVEKVSDHADIWDMYDQISDLISIIHDSK
                     LNRILLSATVSREEKADFVRTVRQSSFWQINDLIEDVIRDGHADLLLETLERVQLQIS
                     KFKNEFEARVVSVYPLTEAQKERLRHLVEQRFSLRVRNITEELDQSLLGGFIVTVNHK
                     VIDASVRTQLKDVRKKL"
     gene            complement(21447..21953)
                     /gene="atpF"
                     /locus_tag="AC1PJC_000088"
     CDS             complement(21447..21953)
                     /gene="atpF"
                     /locus_tag="AC1PJC_000088"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045259 - proton-transporting ATP
                     synthase complex [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HIP6619142.1"
                     /translation="MATTITMQSSTILGNFILVTASFAVLIILIRVFAWDKITGIFEE
                     RANKIANDIDAAEEKLTAAANLVQQREDELVQGRIESQKIIQDAVERAKLEKKRILEQ
                     ADVEIQGLKQKAQLEIEAEKREAQENLRVQVAELAVDLASKIILEDLDQQAHSNLIDR
                     YLDKLGDK"
     gene            complement(21971..22687)
                     /gene="atpB"
                     /locus_tag="AC1PJC_000089"
     CDS             complement(21971..22687)
                     /gene="atpB"
                     /locus_tag="AC1PJC_000089"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HIP6619143.1"
                     /translation="MEEHLSPTLTLGPVTFDLTMVLVSVITISIIFLLVFWASRRMEL
                     KPKGKQNVLEYVYELTINFTKGNLGDAEAKRYSLFFFTVFTFLLVANNLGLMTKLETA
                     EGHNLWTSPTANMAYDFGLATIATVFCHVEGIRRRGFKAYLKSFVTPWAMAPMNILEE
                     VTNLVSLALRLYGNIYAGEVLVSLLLQLSQQSALAYPIAFALNVVWTAFSVFISCLQG
                     YVFIMLVSMYLNKKISSESE"
     gene            complement(22724..22924)
                     /locus_tag="AC1PJC_000090"
     CDS             complement(22724..22924)
                     /locus_tag="AC1PJC_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HIP6619144.1"
                     /translation="MSLGALALGLACLGVSIGEGLLVASYLSSTARQPEMQSKLMAGV
                     FLGVAFIEGTFFVTLAMTFVLK"
     gene            complement(23061..24104)
                     /locus_tag="AC1PJC_000091"
     CDS             complement(23061..24104)
                     /locus_tag="AC1PJC_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family lipid kinase"
                     /protein_id="HIP6619145.1"
                     /translation="MEERKRARLIYNPTSGQEIMKKNVAEVLEILEGYGYETSAFQTT
                     AEKDSAKNEATRAALAGFDLIIAAGGDGTINEVVNGIAPLEKRPQMAIIPTGTTNDYA
                     RALKVPRGNPVEAAKVIGKQQTILMDIGLAKNQKNGFHQEHYFINIAAAGTLTELTYS
                     VPSQLKTMFGYLAYVVKGAELLPQVQFTPVRVEHDEGVFEGSVSMIFVALTNSIGGFE
                     QIVPDAKLDDGNFTLLMVKTGNLFEILHLIRQVLDGGKHIESDLVEYIKTKSLSIENL
                     NPDNRLLLNLDGEFGGEAPVRLYNLSNHIEFFADTDLVSDHAITLDTDQMNREDMAKR
                     FIEETDHIDEAIK"
     gene            complement(24115..26073)
                     /gene="ligA"
                     /locus_tag="AC1PJC_000092"
     CDS             complement(24115..26073)
                     /gene="ligA"
                     /locus_tag="AC1PJC_000092"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011837172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HIP6619146.1"
                     /translation="MKTRISELVSVLNQYAKEYYQLDQPSVSDAEYDTLYRELVELET
                     AHPELILPDSPTHRVGGKVLDGFEKYSHVYPLFSLQDAFSREELEAFDQRVRKEFPQA
                     TYICELKIDGLSISLTYEAGNLVVGATRGDGSVGENITENLKRVADIPLTLPEAVDIT
                     VRGECYMPKASFDRVNNQRQEAGEAEFANPRNAAAGTLRQLDTGVVAQRGLATFLYQE
                     ASPSEVTSQSQVLEKLDALGFVTNHEYCLAESIDDTWDFIEKIAERRDDLPYEIDGVV
                     IKVNDLAIQEELGFTVKAPRWAVAYKFPAEEKEAEILSVDWTVGRTGVVTPTANLSPV
                     QLAGTTVSRATLHNVDYIAEKDIRIGDTVIVYKAGDIIPAVLKVVDKYRKEQEIMPIP
                     SHCPSCQSDLQHYEDEVALRCINPICPSQLMSKLEHFASRDAMNIAGLGSSIVEKLFG
                     AGLVHDVADIYKLTVDDLLTLEGFKEKSADKLYQAIQTSKSNSAERLLFGLGIRHVGS
                     KASKILVEKFGDLETLAFADQEAIASLEGLGQVIAKSLTTFFASEGAQQLLAELKEAK
                     VNLTYLGQVVDENAALSGMTVVLTGKLERMKRNEAKAKLEALGANVAGSVSKKTNLVV
                     AGTDAGSKLTKAQELGIEIKDEAWLESL"
     gene            26196..26342
                     /locus_tag="AC1PJC_000093"
     CDS             26196..26342
                     /locus_tag="AC1PJC_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPJ_0845 family protein"
                     /protein_id="HIP6619147.1"
                     /translation="MAVTYKRQDDLEKMLEEFASFEKLEEIEYPDPKSKEHSEKNNLN
                     QDKK"
     gene            26344..27249
                     /locus_tag="AC1PJC_000094"
     CDS             26344..27249
                     /locus_tag="AC1PJC_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016398535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HIP6619148.1"
                     /translation="MFGLDQLPTSVLQAGAIFLSIMIEALPFVLIGAIISGFIDVFIT
                     PDKVRKLLPKNKFLAILFGTFIGFIFPSCECGIVPIVNRLLEKKVPSYTAVPFLVTAP
                     IINPIVLFATFTAFGNSLLFALYRALGAIIVSLVLGIILGFFVKGPILKGSKFDHHQH
                     DYSDKTSWQKVGFALIHAIDEFFDTGRYLVFGCLFASLVQVYIPTAVLTTIGHSPLTA
                     ILLMMLLAFLLSLCSEADAFIGASLLSSFGFAPVMAFLVIGPMVDVKNLLMMKHYFKG
                     KFISGFIITITLVILGYSLILGGVV"
     gene            27246..28061
                     /locus_tag="AC1PJC_000095"
     CDS             27246..28061
                     /locus_tag="AC1PJC_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000617844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03943 family putative permease subunit"
                     /protein_id="HIP6619149.1"
                     /translation="MIRFLILAGYFEMTMYLYISGKLDQYINLHYSYLAYLSMVLSFI
                     LAIVQLYVWVKEIRVHSHLKSKIAKLSSIGLLLIPLAIAWLFPTVSLDSTTVAAKGYH
                     FPLAAENDTNTQKQEGTTVQYLKPDTSIYFTKSAYQNQMREIADRYLAEETIVVTNEN
                     YMEVMEAIYDYPTEFSGKTIEMIGFVYNDPDNSQQFFLFRFGIIHCIADSGVYGLLST
                     GATTEFPNNTWVKARGTIKIAYHTSLKQNLPTLELQSMVQIEQPDSPYVYRVF"
     gene            28140..29627
                     /gene="zwf"
                     /locus_tag="AC1PJC_000096"
     CDS             28140..29627
                     /gene="zwf"
                     /locus_tag="AC1PJC_000096"
                     /EC_number="1.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000096131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004345 - glucose-6-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HIP6619150.1"
                     /translation="MSSHVLFTIFGASGDLAKRKLYPSLFRLYKAGHIKENFAVIGTA
                     RRPWTKEFFEQTVIESLGDLPDTPRQAHEFASHFYYQSHDVNDTEHYVALRKLQDDLC
                     EKYNTQHNKVFFLSMAPEFFGTIAKHLKSEQIVDGQGFERLIIEKPFGTSLATATKLN
                     DELAAAFNEDQIYRIDHYLGKEMVQNIFAVRFANIIFEHIWNRDYIDNVQITFAEAIG
                     VEDRGGYYDHSGALKDMVQNHALQVLSLLAMDKPASFKEEDVRAEKIKVFQHLRQPSD
                     EDLKRNFIRGQYAAGSIDGKDYVSYLDEPNIAEGSQTETFAGGVFFVDTDRFRDVPFF
                     FRTGKRLTEKGTRVTITFKHAEDIFGQPSEANVLTIFIQPTEGFMLSINGKEVGSHFA
                     LTPAKLNFRHNATALGNSPEAYEKLFFDVLNGDSTNFSHWEEVKASWSLIDRIVDLWA
                     SNQVPLHTYPAGTMGPEAAFDLLESYGCKWVWTPDVWYRERGLLK"
     gene            29826..30500
                     /locus_tag="AC1PJC_000097"
     CDS             29826..30500
                     /locus_tag="AC1PJC_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA alkylation repair protein"
                     /protein_id="HIP6619151.1"
                     /translation="MTELNTILTQLQAASHTGTLKRYEKIGETKPYYGVPMGAISGIA
                     KAYKNRLDLFAPLWQTGILEAQYLAIQVAKAKSNQLAHADLETCLNEVVSVNVLDKLA
                     SIILSKRKDSRNWEETLLTKDQAIFQRLGWFLRAKYFAGKTATNQEIEETLEHIRLHL
                     QTADPLVQWTMNQCLVEIAVAYPDYLEQGLAIGQELAVYSDMKAPKGCISAYAPDWIE
                     ALLRRK"
     gene            30502..31059
                     /locus_tag="AC1PJC_000098"
     CDS             30502..31059
                     /locus_tag="AC1PJC_000098"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIP6619152.1"
                     /translation="MQHKGTQILETERLILRPFQASDVESVFQNWTSDEKVTTYLTWP
                     THQTLQDTEDYVQFCLQSYSQEKTYRWVIELKENQHPIGDISVVSLDERVQAAELGWV
                     LGSKWWGQSYMTEALEAVNHYLLEEVGCLRITAVHDSENRPSGRVMEKVGMTYEGTLR
                     QAARNNRGIVDIAIYSLLHTDRKSR"
     gene            complement(31083..32357)
                     /gene="ftsY"
                     /locus_tag="AC1PJC_000099"
     CDS             complement(31083..32357)
                     /gene="ftsY"
                     /locus_tag="AC1PJC_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004299108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HIP6619153.1"
                     /translation="MGLFDRLFGQEKQEEQVALVEEVEREQSASSEDTVTTEVESATQ
                     EMEEFQSEVAEPELTAEQEAQKQRTLDMMAQYYAAKEAAAARVKEAQEQGFDPAIQTK
                     VKEEPVEEVAPVEQESEQDKYQRTLKKTRTGFGARLNEFFANFRSVDEEFFEELEEML
                     ILSDVGVQVASTLTEELRYEAKLQKAKKTDELRRVIIEKLVDIYEKDGQFSERINFQD
                     DLTVMLFVGVNGVGKTTSIGKLAYKYKQAGKKVMLVAADTFRAGAVAQLVEWGRRVDV
                     PVVTGPEKSDPASVVFDGVKRAVAEGVDILMIDTAGRLQNKENLMAELEKIGRIIKRT
                     LPDAPHETLLALDASTGQNALSQAKEFAKITPLTGLVLTKLDGTAKGGVVLAIRQELD
                     IPVKLIGFGEKIDDIGEFKSEEFMRGLLEGLV"
     gene            complement(32359..33171)
                     /locus_tag="AC1PJC_000100"
     CDS             complement(32359..33171)
                     /locus_tag="AC1PJC_000100"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HIP6619154.1"
                     /translation="MAIKLIALDLDGTLLTSDKRISEANKKALQAARERGVYVVLTTG
                     RPLQAIGTFLEELDLLGENQYSITFNGGLVQENTGRVLDKVGFTIDDVRTIRRVTNDL
                     DLPLDVLYGGDVYSLPSAHESLYLTCNPLLNKIVASDEEMPEDFVYNKAVSAVAADFL
                     DGQIPKIPAELHERFEIFKSRDILLEWSPKGVHKANGLAKLIGHLGIDQSEVMACGDE
                     GNDLSMIEWAGLGVAMANATDEIKSAANLVLPKTNDEDGIAWAIKHYVLNED"
     gene            complement(33161..33970)
                     /locus_tag="AC1PJC_000101"
     CDS             complement(33161..33970)
                     /locus_tag="AC1PJC_000101"
                     /EC_number="3.-.-.-"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HIP6619155.1"
                     /translation="MINKIYASDMDGTFLREDHSFDKERFRRILNQFKEKGYLFVAAS
                     GRSMQSLKLVFEDFVDEIGFVAENGSIVEYQGQTIFMDDPISPEIYLPIIAGIDAGPF
                     GSSQSMVLSGLENFYLLKNAEPQFLEAMTNYYAHFRLVDTFEEVREEIIKINAKFSPE
                     EMDDARRWLNDTFEGVTAMTTGFDNIDIIPNGSNKSVGLSHLCHHFGITRQDVVAFGD
                     NQNDLDMFDFAGLALATENAREEVKARADLMIGHCNDGAVLAYLEEEVNGN"
     gene            complement(33967..37500)
                     /gene="smc"
                     /locus_tag="AC1PJC_000102"
     CDS             complement(33967..37500)
                     /gene="smc"
                     /locus_tag="AC1PJC_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004299103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HIP6619156.1"
                     /translation="MYLKSIEMQGFKSFADKTKVVFDRGVTAVVGPNGSGKSNITESL
                     RWALGESSAKSLRGGKMPDVIFAGTESRKALNYASVVVTLDNSTGFIANKQKEIKVER
                     HIYRSGDSEYLIDGQKVRLRDIHDLFMDTGLGRDSFSIISQGRVEAIFNSKPEERRAI
                     FEEAAGVLKYKTRKKETESKLAQAQGNLDRLDDIIYELDNQVKPLEKQAQTAKKFLEL
                     DGQRKELYLDVLVAQLSLGKEKLSEKEAELESVKTELTSYYKQRSELEQENQNLKEKR
                     HRLSEQLEREQAVLLDLTKLISDLERKIEVHKLESSQNESSRQEAQARLENLLTRREQ
                     LAEQIEQKQETLAQLDSSLSSLKDDIAAVDKEISYFSEDPDQVLDHLREQYVALMQEE
                     AEASNRLTKIQQDIANQISLSESKSEDLARLQTEKQTAQEVLDKSRKSLEEADHVLRQ
                     LLESYQIKKSELDQTQTAYQAEQGRLFDLLDQLKGKQARQSSLEAILKNHSNFYAGVK
                     AVLQAAPSLGGIIGAVSEQLTFDTRYQTALEIALGGASQNVIVEDEATAKRAIAFLKE
                     KRQGRATFLPLTTIKPRQLSGQQVSLLESSEGFLGLASDLVTYQPNLDAIFQNLLGTI
                     AIFDTIDYANQAARATKFQVRMVTMDGAEIRPGGAFAGGSNRNNSTTFIKPELDALLG
                     EIAELSSQLQEQESLVAAKKTSLDQTREALETIKAEGEEARLNQQSARIHQEQAENRL
                     AQLSAQYDLQMSQVSPTILTELEEAAAKEEVNVQALNEKKLALDQQINQVRDNRDSIQ
                     ESLQKLQTQKGQLTLEQAELTSQLRFEQTDLRRLQEEKVVADKEISLLEDMIDQKLEA
                     LEDTSIEILEEQLQAASDKQNQTNQILIRLKFELEDIDGQFEDLEERLQQARTKNDDL
                     IRKQAKLEADCEQAGDKLRTLLGNLTEHFKLSFEAAQSQAKEVENLAVAEQSLKDLER
                     AIRALGPVNLDAIEQYDEVNNRLTFLNEQRTDILSARDLLLDTIHEMDDEVKERFKVT
                     FEAIRESFKQTFKQMFGGGSADLILTEGDLLTAGVEISVQPPGKKIQSLNLMSGGEKA
                     LSALALLFSIIRVKTIPFVILDEVEAALDEANVKRFGDYLNRFDKESQFIVVTHRKGT
                     MAAADAMYGVTMQESGVSKIVSVKLKDVEKL"
     gene            complement(37503..38189)
                     /gene="rnc"
                     /locus_tag="AC1PJC_000103"
     CDS             complement(37503..38189)
                     /gene="rnc"
                     /locus_tag="AC1PJC_000103"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HIP6619157.1"
                     /translation="MKDLHAKLLADFGIDFSDLNLLETAFTHTSYANEHRLLKISHNE
                     RLEFLGDAVLQLMISKYLYQKYPDRPEGEMSKLRSTFVREESLAGFSRACGFDRFLRL
                     GKGEEKSGGRNRDTILGDAFEAFLGALLLDKGEKTVEEFIHKVMIPRLEKGNFERVTD
                     YKTALQEILQVNGEIAISYQVIAESGPAHDKTFEVEVSADQRVIGRGRGRSKKLAEQA
                     AAKNAVEARG"
     gene            38378..39367
                     /locus_tag="AC1PJC_000104"
     CDS             38378..39367
                     /locus_tag="AC1PJC_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HIP6619158.1"
                     /translation="MQNKTKQLNTSLLSLIQFIGAILVIALHCRRLFEADQLHFIQKS
                     IFSRMVVPYFMVTASFFLRRNYPSLSKQYLIRYSKQYLTWSVLYLPFYLFYLNLQEIP
                     LLYYPLALLVGLTYTGTSYQLWYMPAFLLGLVLVHYSLRKWGWRITVCLASLLYLLGS
                     VETYSSYLAESIFLTAFDSYKTFFFTSRNGLFYAPIFVLTGFYLADKLNHPIFQYRQK
                     NKLLVCIALLAFEAAVIYLNQGYDKNFLFSLIPFTAYLVAWTLTTDLFRQKKFQFLKE
                     YASYYYFIHVIPVEISFFFLETSSLTRIQQGWLVFLITVITCQLLSWLIINTQ"
     gene            complement(39612..40652)
                     /locus_tag="AC1PJC_000105"
     CDS             complement(39612..40652)
                     /locus_tag="AC1PJC_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR/SmtB family transcription factor"
                     /protein_id="HIP6619159.1"
                     /translation="MKLDYRDYRSEIVEKLFIPLIVKEREEPIEADFSQKEKDILKDA
                     LDIRDEIEEKLVDFRQEVDQVFVWGHIFNILHSLYFYILNDGQDPKTVEEACQLILAL
                     SQEEVEDAMRTMLASENDGHREKDLSLMELLEKTDKKPADKWYWSLAIRNPLETVQRS
                     VHLLDKMLPIYQPYFEQARVEREAFARDFDIEQLYRESKQLAMTSLDSLGVETAQFFV
                     LSPWNYWFAYYGNEEFDYMKVALLASCRIDQMMLSNDELDLDDLTTALKVISDSTRYQ
                     VLVELTKPHAKSKDIAERLNITGAAVSFHTQKLINGDLLLFNAKDKNVKYSVNRDLLQ
                     QVIDKLKEDFDL"
     gene            complement(40664..41932)
                     /locus_tag="AC1PJC_000106"
     CDS             complement(40664..41932)
                     /locus_tag="AC1PJC_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIP6619160.1"
                     /translation="MKKIICNKMFLFSYLADVISNFGDTLYYLALMNYVLLLPDTKFA
                     LAMITASETLPILAGLFIGIWADKTKNKLDTILATLVARVGLYALVGLLMGFTPALWI
                     VAVVCLVNFLSDLSGQYENGLYMPLSLRVLEAEDRETAMAFKNTVGGILMIVFRSSGA
                     ILIGYMSYQNLAFFNAGTFLVSLAIMAGLRPAFAKLLKENPIQEADQTKTEAGFIKGV
                     GQSLKESYQAIQNIPVLKASILTISGINTVVSAVSPLVILAMKEFSDFVIVNSGITLA
                     LVFNLFSVGYILGSSLGMAFFKNISLSNLLKCCTGLAVILFVGFYFHNIYIVMATILV
                     TTMTTGIINPKLYALIMNELPEDKLATINAGMGTIFNIGMVAGQALVALMVTVLSVTS
                     ISLIFLLLSVGLVSYTILVGRKPKNEVAQV"
     gene            complement(41967..43235)
                     /locus_tag="AC1PJC_000107"
     CDS             complement(41967..43235)
                     /locus_tag="AC1PJC_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIP6619161.1"
                     /translation="MKKLIHNKLFLSSFVADLISNFGDTLYYLALMNYVLLLPDTKFA
                     LAMITASETLPILAGLFIGIWADKTKNKLDTILATLVVRVGLYALVGLLMGFTPALWI
                     VAVVCLVNFLSDLAGQYENGLYMPLSLRVLEVEDRETAMAFKNTVGGILMIVFRSSGA
                     ILIGYMSYQNLAFFNAGTFLVSLAIMATLRPALAKLLKENPIQEAEQTETEAGLIKGM
                     RNSLKESYQAVQNIPVLKASIVTIASLNAIFTALSPLVILNMKEFSDFVIVNAGTTVA
                     LISIFFSVGSILGSSIGMALFKNVSLINLLKFSTLMPVLIFSGFFLHNIYVVLTVIFV
                     TAMTLGVFNPKMNALVLNELPEDKLATVGGGIDAFCQIGMVAGQALVALMVTVLSATS
                     ISLIFLLLSVGLLGYSIFTGKNTEKIVASA"
     gene            43505..44992
                     /locus_tag="AC1PJC_000108"
     CDS             43505..44992
                     /locus_tag="AC1PJC_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1846 domain-containing protein"
                     /protein_id="HIP6619162.1"
                     /translation="MKKIAFDSTKYLNLQRDHILERIAQFEGKLYMEFGGKMLEDFHA
                     ARVLPGYEPDNKIKLLQELKDQVEIVIAINASNIEHSKARGDLGISYDQEVFRLIDTF
                     NDIDIYVGSVVITQYRNQPAADAFRKQLEKHGIKSYLHYPIKGYPSDIDHIISPEGMG
                     KNDYIETSRNLVVVTAPGPGSGKLATCISQLYHDQLHGVTSGYAKFETFPVWNLPLHH
                     PVNLAYEAATADLDDLNMIDPFHLQTYGKTAVNYNRDIEVFPVLNRTFERILNKSPYA
                     SPTDMGVNMVGYSIVDEEAAIEASKQEIIRRYYQTLVDFKAERVSEQAVKKIELLMNE
                     VGVTPADRKVVIAAREKAELTTSPALAIQLPTGEIVTGKTSDLLKPTATVLLNAIKQI
                     ANIDDETLLIEPNYIRPIQELKADYLDKTNTRLDASEILNALAITAQDSPLAARAMKE
                     LGQLNGSEAHSTVILSDEDKSVLRKLGINLTFDPIYQHNKFYQAK"
     gene            complement(45099..46523)
                     /locus_tag="AC1PJC_000109"
     CDS             complement(45099..46523)
                     /locus_tag="AC1PJC_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002904138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent glyceraldehyde-3-phosphate
                     dehydrogenase"
                     /protein_id="HIP6619163.1"
                     /translation="MKAYNNYINGSWVGSEKSIAIHSPINQEKLGTVPAMSKEEVDKA
                     MDAARKALPAWRALSAFERAQYLHKAANILEERKDAIGEILAKEVSKGIKASIGEVDR
                     SAHLIRFAAEEGLRVYGSSLEGGTYEPTAKSKVSLVRREPVGIVLAIAPYNYPVNLSA
                     SKIAPALIGGNVVMFKPPTQGSISGLLLAEAFADAGIPAGVFNTITGRGSEIGDYIIE
                     HPEVNFINFTGSTPIGQKVGKLAGIRPIMLELGGKDAAVVLEDADLDHTAKEIVSGAY
                     SYSGQRCTAIKRVLVMDSVADELAAKLKAEVEKLTVGDPFENKDITPVIDEQSAEFIE
                     GLVRDAQAKGATELTPYKREKNLIWPTLLDHVTPDMEIAWEEPFGPVLPIIRVSSLDE
                     MLELCNQSEYGLQSSIFTSNYPFAFDFASKLEVGTVHINAKTQRGPDNFPFLGVKGSG
                     AGVQGIRYSIEAMTKVKSVVFDVQ"
BASE COUNT        13448 a        11212 c         8511 g        13431 t
ORIGIN      
        1 tcacaagcga agtattttaa ataagaacta gtttttcgat cataaagata gtattttgaa
       61 ggaattctga ctgtattttg aaaaaaacta gccttagatg gaagtactga actgttgata
      121 caggttctta tagttttgcc tgccatttat tggcccaaac attctcattt ggcacaccat
      181 agaatgcagc tttcccttct aatttatcaa taagggattc aatcgtgttt ttattatgat
      241 gataggcatt gatagcagtt ttgaccatgg taacatcgtg aaggtgagtt gtatagttta
      301 gtgaaacgaa aatggttgga acttcatgta cataccaagg aacttcattg gacatggctg
      361 ttttccactg gatgcggtaa ttattctgcg ctccatatcc aatgacattg gcaacagtca
      421 aagctaaatc aacttcttct cggtattgca gcgtttttcc tttgattcga gtcgtaccat
      481 cattgacggt cacttcataa ccacgcgctt ccaaggcagc tttaaggtta tcaaccactt
      541 ccgtacttgc cgccataatc ccttcttttt cgccttctag gtaatacaaa cggattctgc
      601 gatgggtttc tggactgatt ggaaaatttt tctgtgtatc tttcaacagc gtaattgctt
      661 tgtctgctgc ttcacgttgc caagccaagt gttcttcaca gccgataata gccaattcat
      721 cagctgattt tagtaaggtt ccttctgctt gcttgatatg cagattgagt ttggctttca
      781 gacctaaaat gcgacggaga gcatcatgaa ggcgttcttc agtaatcact cccttgcggt
      841 agccattgag cataaattca aaatcttctt ccaagttatt gaagaataag aacatatcgc
      901 aacccgcagc aatggctgca ggtacgtagt cttcacgacg catcgctgct gtcatcccca
      961 acatgtggct ggcatctgtt atgaccaagc cattgaattc cagtttttct ttcaataaat
     1021 cttgaatcaa ttcgggagcc agtgttgcgg gcaaaatgtc ttcatccttc aaagttggat
     1081 tgagtcgttg ttggtaatat ggcaaggcaa tatgacccgc cataatcatc tcaacaccag
     1141 cttcaatatg atgacgatag acacgaccaa agctcttgtc ccattcttct ggagagagct
     1201 cattgacacc gaggaccagg tgctgatcac gctcttctgt accatctcct gggaaatgct
     1261 tgatacattg aataacatct ctttcagcag tcaatccttc tagataggca ctggtataag
     1321 caataacatc atccgcattt gtgccgtagg ctctggtatt gacaatcgta ttgcgccagt
     1381 tctgaacaat gtccacgcac ggatcaaagt tgacatttac acctaatgca gtctcctctc
     1441 tcgcagatac gagaccagct aggtagggaa tacgaggatc ccgactggct tccgattgag
     1501 cgcctgaaga aatataggtc cctcctttca cagctccatc tccacctgag tcacagttcg
     1561 ctgcaaccaa gagaggtact tttgaatagc tttgcaactc gttaatcagt ccttgtacct
     1621 gttctggact gccgttcata taacgagcac cacctatatg gtatcggttc atcaattcct
     1681 gattactcag attatttcca ctaaaggcat cccctccgaa gaagaataga ttaacaaaca
     1741 attgaccgat tttttcttca tcagtcagat gagccaaggt atcttctacc caggtaatct
     1801 gctcatcatt caaacaatag ggtttcttcc gcaaatcaac caatctagac atcttttcct
     1861 ccttattttc cgcgccaaat acgtgtatct agtaaaccac agtaggcatc tacaggcgat
     1921 actcctgtaa agtctgactc tcctgctagt ttagcaacca aggcttctaa tgtgacaggc
     1981 aagccatcgt aggcattgat ataggttgca acctgtggca tatctgcaag tgcaaatggg
     2041 tgctgaacag agacaacaat ggttggaatt tcgtgaacat agaaaggctg gtctggtgtt
     2101 cccttggcag ctggccaaat aatccgctga gttgtccccc ctgagttgac atcaactaaa
     2161 ttgataatca aatcatagtt atctgtgatt tcggcaattg gacgcttgga agcatagaca
     2221 ttcgcaatcg ctgcagggcg ctcttcttct ggtaatttgg caatccgtgc ttctgtattt
     2281 tcccagatag atacttggtg acctcgagct tctaatagtt ctttcagcgt atcggctgct
     2341 ctcttcttgc cagcattgat catggcacca aaaccaccct tataaccatc tacttctacc
     2401 aacaaaatac gtttgtagcg ttctggattg actgggaaaa ttccttcttg cttggctttt
     2461 accaaggtaa tcgccttgtc agctacttct tttgcaagct gtttcgcctc atctctacca
     2521 atcaaagcca gtgcttcttc ttttggcaac atgatttcct gacgacgacc ttcaaacaag
     2581 tgaagaccga gtttagcttt caagcccaag gtacgacgaa gagcatcatg gaggcgttcc
     2641 tcagaaagca gaccattttc caatccttct ttcatccatt gcaaatcttc ttctggatcg
     2701 ttgaagaaaa ggaaaagatc acatcctgcc tcaatagctg taggcaatag ctcacgacgg
     2761 gacatagagg ctgtcatacc gatcatgtga ctggcatccg tgacaatggc accattgtaa
     2821 cctaattctc cacgaagcaa ttcatccaag agggttttat tcagcgaagc tggcaacata
     2881 tcatccaatt cacgttctgg atgcatttct ttctcaacat ttggcaaatg aatgtgcccc
     2941 gccataatac ctgggagacc tgcgtcagcc atctcaccat aaatccgtcc aaatgtttcc
     3001 atccattcag atttggtcat gggattcgaa gcaaaagaga gatgatggtc acgttcgtca
     3061 ataccatcgc ctgggaaatg cttagcaaac ggcacaatgc catgttccat aatgcctcgc
     3121 atgtattctt tggacaattc aatgacctgg tctacattcg ctccccatgt tcggtttgca
     3181 atgattggat tgcgccaatt acggctgagg tccataatcg gtgcaaagga ggcattgcag
     3241 cctacagcag ctgcttcaag tcctgcaact ttccccattt cataagcata gtggggatcg
     3301 gttgtcgcag caatcttgat ctcatcccca attttcgttc cgtccgtaac agcgccattc
     3361 ccaccagatt cggtattagc tgcaatcaaa aggggaattt tagacttggt ctgcaaaata
     3421 tagttttgct cccaaatatc tgcagcaggt ccaggattgt aacgaacagc agcaatctta
     3481 taatcattta atactccagt cagatagtct tctgtccgct ggctccccat gttgacaaag
     3541 aggtgaccga ttttttcatc caatgtcatc tgagcaatgg tttcttcaat ccaagaaata
     3601 gcctcttcat caaggctgta aggtttcttc cgtaaatcta ctaaatgtgt catgtttgcc
     3661 tccaaaaaag ctagagggca tagcgcctct agcccttctc tctagtcgtc taaattattc
     3721 caaaatgcct gtgtcaattc tgtttctttc tcatctgtga atgcttgatg agcaaattca
     3781 tctgcaatcg tttctgtcaa atctgcccaa gattgcatct ctcgtcctac taaaatagga
     3841 tagaaatgga caccgttcaa ttccgccgcc ttcaaatcac caggcgagtc accaatcatc
     3901 ataatcttat caggacaata cccttcctct attaacagtt cgatgacatc ttctttcttg
     3961 ccacggtctt gacagtacaa ttctgtaaca aagtccagca aaccttggtc tgtccactct
     4021 tcttctactg cttccttatt agcagaagaa accacataga cttttcctaa ctggctcaat
     4081 ttttccaagc ccttgtgaac gccgatgaag gctaaaacag gaccgctata atgcttaatg
     4141 gcttgattga cttgagtgga ccattctaaa gctaattcca agtcttttga aggtcgttct
     4201 tcaatcaatt tttccaggga agcatttgat aaagagtctg tagtagcgac ccaatttttc
     4261 aagttatcta taccagtcac acctgcaaat tctaggcctt taactaagcc tacaaaacgg
     4321 ttaatgccac gttctcgtga gtacagattg actcgattcc attcagctaa aaacggttct
     4381 ttatcttcaa caccaaaaac ttccgcagcc aaggggccga aaaagagttt atgtttgtag
     4441 gtcatggtgt ccatggcgca gccatcagag tccacacaaa atacgtattc catcttcatc
     4501 atcagactcc tgaataggct gagaagccac cgtcaatcgg taaaacaaca ccgttgacaa
     4561 aacttgccaa attctcatct gccaagaaga agacccctcc gactagctct tccgcttcac
     4621 caaaccgtcc cattggtgta ttggtcaaaa tcttgttggc acgtgcggtc ggttgacctg
     4681 actcatcaaa tagcaaacca cggttttggt tggtaaccaa gaatccaggc gcaatcgcat
     4741 tacagcgaat accaactttt gaaaaatgaa ctgctaacca ttgggtaaaa ttactaatag
     4801 cagccttggc acctgaatag gctggaattt ttgtcaaagg agtaaaggca ttcatgctgg
     4861 aaatattgat aatatttgct cccgagcgac caatcatatc ctgtgcaaag acctgtgttg
     4921 gcaataaggt tccaagataa ttcaaattga aaacaaagtt gataccggcc tcatccaagt
     4981 cgaagaaagt tttggtctca gctggtagtc caatctcatg gaattcattg tccgttgtcg
     5041 ctttgggatt attgcctcct gcaccattga ttaatatatc tacaggacca aaatctgcta
     5101 ggacttgctg gcgaacttct tccaaatttt ccttagaaag aacgttagat ttataggctt
     5161 ttgcaacgcc tcctgctgct gcaatctcat caacgaagac ctgagccgca gcctcattca
     5221 agtctaaaag cgcaaccttt gcacctgcct tagcgaattc ttttgccaaa tagccacaaa
     5281 gaacgcctcc tgcacctgta ataacaacaa ccttatcttt aaattcaata acacgtgtca
     5341 tactagctct ccttatttcc gactgttttt actttaattc caaaatctgg tgtcttaccc
     5401 gctgctcgca tattggcttc atatagaccg ttaaagtagg ttgcgccaag tgcacggtca
     5461 tacagaccat aaccaggtgt cttcgtttga tctccccaga tacggcggcc gtggtctgga
     5521 cgtaaggctc cagcccagtc atagtccacc aataatttaa caacagcatt catatcaatg
     5581 tcaccagcct gtgacagatg tgctgtttct tggaagcccc aagcacctgc cgtcacattg
     5641 cgcgtatgca taaaattgat acgattgcgt ttgagagcat attccgtcat ggcaaggaca
     5701 tcatttttcg gatcagaagc ataggatccg acacacatgg taattccatt gtgttctgaa
     5761 tcatagagat tcaaaaatcg ttcaacggct tcttgaccag taataatacg tggcaatccg
     5821 aaaattccat acggagggtc atcagggtga atggccattt tgacgccagc ctcctcagcc
     5881 gttggcagaa ttgctttgat aaaatactcc aaattcgccc ataaatcttc ttcggaaata
     5941 ttctgacgat aattttcaat aatagccttc atttcttcct tggaatagga cgaatcccaa
     6001 ccaggtaaat tcaaatcatc cgccacagga tcaacacctg ctaaatcaga tttaagaaaa
     6061 gctaaagagg ttgaaccatc tggaagtgga tggtgtagat ctgaacgtgt ccagtcaaac
     6121 acaggcatga aattgtagca tacaactgga atacctgcag ccccgacatt acggatggac
     6181 gttttatagt tttcgattaa ggcatcacga tttggcttcc cttgtttgat gtcttcatgg
     6241 acaggaatgg attcaatgac ggtgatttca agtcctgcat cctccaccat ttttttcagc
     6301 tctagaatat tttccaaggg ccaagcctgg ccaaccggta catcatagac agctgtcaca
     6361 attccctgca ttccaggaat tgccttaatc tggtcaaggg tgacaggatc ctttttccca
     6421 taccatcgaa atgacatttt catgatttac tctcctttat tgttcaaaaa attctttggc
     6481 attgtaatag gatatagctt ctacaagctg gcctaaacga ttgtaatctt caggcacttc
     6541 ttcatcaaca atccattggc cgacataagt cgctaaaatg cgtctgaaat aatcatgccg
     6601 ttgataagat aaaaagctac gcgaatctgt caacatacca acaaaatttg caagcatgcc
     6661 ctgttctgca taagcattca tctggtcaat catgcccaac ttggtatcat tgaaccacca
     6721 accagcacca aattgtagct ggctacgaag cccttcctca ttggactgga aattcgccaa
     6781 agtattggct agagcaatgt tgtaacttgg attgagattg taccaaatca tttttggaag
     6841 ggccttttcc ttgaccaagt tatctaacaa acaattcaaa ttcacagtca gatatgtctg
     6901 gtctccaatc gaatccacac ctatatctgc tccaagtttt tcaaacagtc cggtatgatt
     6961 gttccgtaag gcaccaaagt gaacttgtgt cacaaagcca tgtttcttgt acaatctgca
     7021 caattctcta aagatggcag tctgccattt attgatactg gattggccag cctctttacc
     7081 tgcaagtctc gctagtaaaa tatcatcaag ctcttcaagg cttgcttctt cgtatgaaat
     7141 agccgtaaaa ctgatgtcac ttgctcggca accgtgttga gcaaaatagg aaacacgctg
     7201 accaagtgcc tctacaaaac ttgcaaaatc ttttactgtt acccctgtta cctcctccaa
     7261 gcgtttaata aatggattga aatttcgatg ttctataaag gcttcatctg ggcggaaagt
     7321 cggtgccact acagtatcta tagttgagtc ctcagccaag cgcttatgcc attccaagct
     7381 atcaagagga tggtcagttg tcccaataaa ggtcacccta gcatccgcaa tcagcttacg
     7441 tggactaact tgatgttctt gcaaataagc attgagctga tgataaagtc gctctgcatt
     7501 ttcttcggtc aacaattcct caacaccgaa aacctgtcgc aattccaaat gactccaatg
     7561 atagagagga tttccgaaag cccgttccaa ggttcttgcc caggccttaa acttatctag
     7621 tttacttgct gaacctgtga tttcttcttc tgagatacca tttgcccgca tcaagcgcca
     7681 cttataatgg tcacccccca gccacagatc aacaatatct tcataaacct tatcttcaaa
     7741 aatttcctta ggatccaagt ggcaatggaa atcatagata ggaagctctg ctattttccc
     7801 gtaaagctcc ttagcaggct cgttttttag cataaagttt ttatcattaa aactcatttc
     7861 atccctccaa agctgcaaca aaactgcgag caatcgtcgt tacactttca tagccttcag
     7921 cctgcactcg acttgccaga gccgaaccga ctccaacagc acaagcgcct gccttcttcc
     7981 aatctgcaac attttcaact gatacgccac cagaaggcat caaatctact tggggcactg
     8041 gtccgtgaat atccttgata aatccaggcc ccaagacacc accagggaaa agtttgataa
     8101 tgggacatcc cgcctgacta gctgtgacaa tctctgttgc agttgcacag cctgggaagt
     8161 agaatacctc agcctcttgc gccaagtctt gaattgcttt atcaaaatga ggactaacca
     8221 ggaaactagc acctgcatca atggccgctt gtgccagctt aagattcatc actgttcccg
     8281 ccccaatgac tacggatgaa tcatctgaga actcctcttg taattctttg ataactgtcg
     8341 ctgcatttgg agtcgaaaat gtaatttcaa tatttcgaat acctcccaaa atcgcatggc
     8401 gagcgatttc tttcgcatct tcttcatctt ttccgcgaat cactgcaaaa aagtaatttt
     8461 cttttaattg ctttaacatc ttgacctcca attagaaagc gttgtcattt atagctatag
     8521 tatacaattc atcagatgat ttgtcaataa aaaagcaaaa aatacccaga agaattcttc
     8581 tgggctgtct attttttatt tctatttatg atcgttgaga ccatgcaagg tcatatcttt
     8641 atcgaaccat tcgcttaaaa caacctgtct tactgatata atatgtgcta acatactatc
     8701 atatgctgca acaggatggc gttgcttgat agccattaag atattcctgt gggcctgtaa
     8761 actatccgat ttcatctgac gatttgaata attttcattg atcagatgaa tagattgatt
     8821 aatgacaggc atgagacttg tcatggccag attcccactc atctcagcca gcatacagtg
     8881 gaatttcaca tccaactcca gatgcttcgt gtctccagca gcaacggcct cttcaatagc
     8941 aaagacaatt tcttctagtc gagtaatatc ttcatctgaa gcaaactgtg caacacgctc
     9001 cgcaattctc ggctcaagca aataccgcac ttcaaacaaa tctgtcgtca acttcacacg
     9061 gtctcttacc aaagaaaaac ctaggggatc ctctgatact ccttttttag agctgatata
     9121 ggttcccgac ccttggcgca cctccagaat atttcgagta gccaaacttc gcacagcttc
     9181 acgaacagtc gaacgtccaa cttctaaatc ttgggccaat tcatactcat ttggaagctt
     9241 atcaccaact tcatatcctc tttccaaaat caattccaat aagcgttccg atgctttttc
     9301 taccaagggt ttcgccatgt gcttggtcct ccaatacaac tttctatttg ctactattat
     9361 agctcatttc ctcttataat ggtagtttgg aatggcagtc caacgtttct ttatttctct
     9421 aacaatttgc ttcggttgac gattccgtga gaataacccc ttatgatttc cttgaatccg
     9481 aatgatacca accgtggttt caaaatcagc aaaattccaa acctgctccc caactaaatt
     9541 aggaattgaa tcaaatactc gatggttcat atcatagtaa tccacctgaa attcctctgt
     9601 ataaggaata tcccacatcg aatgcaaacc tggaagggta tctgcaccat attccgtcat
     9661 caaaatcggc ttgtcaggat aaagtttttg ccaaatctcc aactcttgac ggagcccttt
     9721 ttctgccgcc ttcaagtcac catgagcaac ataccaacca taataacgat tgagacagac
     9781 aacatcgacc aaatccataa cctcatcctt atcaggcgtt gctgtcataa tattgaccaa
     9841 ggtcacagga cgcttagaag gatccctgtc cctcatgcgc tgaatcagag gttcaaagta
     9901 agcacgtgct cccttttcat gccctgccgg ttcattggca acaacccaca tcactacaga
     9961 aggatgattc ttatcacgcg ctatcaattc atcaatcaca agctcatgag cctccttggt
    10021 ttgcataact tcccaagtat tttttacttc ttcagaatca cctgtcaaat ttaaggctgc
    10081 attgaaaagc tggaacaggc caactgctgg cacttcatca aggacgacga ttcccaaacg
    10141 atctgccagc cgcatcattt cctcagaata gggataatgg gaagtcctaa aagaatttgc
    10201 tccaatatcc ttcagtaaat tcaaatccat cagattggct gcttcattga aaccacggcc
    10261 attaataaag gtatcttcat gtttaccaaa tcccttgaaa tagaaaggtt ttccattgat
    10321 gaaaaattgc ccattttcaa ccgctacact acgaataccg aattgttctg agtaggtatc
    10381 tagcaagttt tctccgtcaa ataattcaac tttagcagta tagagatagg catccaagac
    10441 ctcccaaagg cgtggatgtt caatgaccat ttgtccattt tcaagaagac ctacttcctg
    10501 tccctcttga tctaaaatag acacacggat ggaatcgtac tgcccaaccg tcttcacatc
    10561 aacctttact accgcctgag tcaaatcttg atttagctcc gtccgaataa caatatcctc
    10621 aatcctattt ttgggacgtt tatagagatg gactgtccgc tggataccag catagttgaa
    10681 aaagtcaaaa ttttctttga cggtcttcac aatttgacca ttctcatcca cttcttcgct
    10741 ataattccct actggaaggg ttgtgtaatt caactcatta ttggcacaga ctgtcaaacg
    10801 gaattggtca gcgtcgtata agtttgatgg aatcaagcat tcaaaaggtg tgaaaccacc
    10861 cttgtgctcc ccgattaact gaccatctgc atagactttg gcctgatgtg tcaccgaacc
    10921 aaagcgtaca actaactctt catcatcagc tactactgga agagctacca tcagttcata
    10981 ccaattatct ccgacaaaac ggcgctttgc tttatcgaca acaacatcat taaaggaact
    11041 cggtacaacc attacttcat ctgtatctaa cagactatga acatcattgt tcccttgctt
    11101 aaaagcccat attccattta aagaataaac tgagcgtgtt tttgtttgta taggatacaa
    11161 catacttttt ccttctttct atcgttttat ttcacgtgac ccttttttca atagcaaatc
    11221 aatatctgat tgactgatga cattaatgtc cccttcaatg gtatgtttga attgaaaact
    11281 agccatcccc aagtcgacta tttcctgtgg cgttttttcc tgcaaataac ccaaaataat
    11341 tcctgctgta aaggcatccc ctgtcccaac tcggtccaaa acttgaatgg attctttttc
    11401 cgtttcataa agaataccat cttgatacaa gtatgccttc agcaaatatt cattattgta
    11461 ggtcatttcc ctctgggtaa aagcaagact ttgcaaagaa taagtctccg ccaaaccctt
    11521 aaccaccgcc aacaaaactt ctttattttc ataagggcgc ttcaacccca attcatcctt
    11581 cacatcttta ccagattcat tgaagagttg aataggctct agaccaaagc aaatatctgc
    11641 taaacctaca aaaggagata atttctccct cgcttcttca aaagaagacc acaaactttc
    11701 tcgataattc aagtcaaagg aaaccttaac accctgcccc tttgccattt ccatcaaacg
    11761 aaaggccagt cggtaaatat ctggattcaa agcgaccgtt ataccactca catgaaacca
    11821 atcgataccg tcaaacatac cttccaaatc atagtcttct tccttggata agctgaaagc
    11881 agaataatca cggtcgtagg tcacctgact aggtctaaga gagaaaccct tttgataata
    11941 ataaagaccc agccttccct cttttcgaat cacatatttc tgtccaatct gccttgcaaa
    12001 aagaaagtgt tctgccattt tccccacttc attcttaggc agtgccgtca ccaactcgac
    12061 tgagtgacca agctgagcca agctggctaa aacattcaac tccgaaccac caaactgaca
    12121 atccaaactc gtagcctgtg ttaaggtctg ataatgagga ggagatagcc gcaataaaac
    12181 ttctccaaat gctaagattt ttttcatacc gcctcctaga tgaaagaccc agctggtatc
    12241 ctccaactag gtcgttaatg tattatttat cgtcgtattg atcaacctta tattgagtta
    12301 catcaacata atccatatca gataatggaa catttttcgc aatcgcacgt acacgttctt
    12361 cgtcttttgc cgctttcata acatggattt tttcttgaat acgagccatt tcttcacggt
    12421 ctagtttgta gaatttcatc aagaacaagg atacgctcaa taccgctgct ggaatcactg
    12481 tcaacaggac aatcagtgct attctcaaat ctgttgaaaa tgctgtttca acagttgggt
    12541 actctttacc aaaaccgata cctgctaata caaatccaac aaccattgga gcaaatgaag
    12601 aagcaattga gtctgtcaat gagaagatag tcccaatcat acctgacaag taacgaccag
    12661 atactgaagt ttcatagtct gtaatatccg cacccatggt caataccaaa ccagatggag
    12721 cactagatgc gtagcgagca atgatataaa caacaaagaa accgattgtg tagagattcc
    12781 aatttgtcaa atccaacata cctggtttag ctgaaaagag cattgctgcc aaggttacaa
    12841 gaccagcaat cccaagttga agcgctgtaa tataggcaaa acgtaaacct ttacgacgag
    12901 ccaattgcgc agcaccaact gttacaagaa tacctggcaa aatcaaaagc atagacattt
    12961 ttccagaaag agcatagtca ccgaagataa taccatacag catcaccccg ataacggaat
    13021 ctccaaacag ttgagcaaca aattttacaa aggctgcaga gattgaaaga acctgcaaag
    13081 gtttgtttcc tttgataact ttccagtagt ctttcaactt cgtttcttgt gtcttctcac
    13141 caagaccaaa gtatttctta ttgtcttttt cccaaatacc gataatagca agaataccca
    13201 gaacagctga aattactact acaccgagga acaattcttg gaagaaactt ggagtgaaac
    13261 caccatgttt cggaaccaat gtccctgaca caacaacctg actaccagtc atcaacacag
    13321 ttgtcgcaat accatcaaca atattaaaga ttggacgttg ctttggatca ttggtaagcg
    13381 caacttgtcc tgcttttgta atcgtctgtt gaagtgaata tccaatttta tggataatca
    13441 aaacaaggat gaatagagga agacggagac tctcgctaac tccacttaaa cctaacatca
    13501 taaaaagaga agctgctgta atgatattcc ccaaaaccaa gataggacga tatttaccaa
    13561 acttagtatc cgttttatca ataataactc cgattgtagg atcgatgaag ccatcaaaga
    13621 tacgaatata gcccatgagt tgactaacaa acagggctgc aagaccaagc acacctgtcg
    13681 ataaataagt cacgaaagta aaagcaacca agtaaatatt cgtcgatgaa ttgttcatcg
    13741 caaataatat gatttgccat aacttggctt tgttataagt aacgtcttcg acacgttgct
    13801 caacatgttt ttccattgga aattcctcct aaatgttttc tacgacaaag tcgtaagcgt
    13861 tttctttaac tatattctaa tattcgtcag atgatttgtc aactgttttt gtaaatattt
    13921 ttaattatac gcaaaaatag acgattttac gtgaaaatcg tctgatatat ttgatttagc
    13981 gaggaagaat tcgtctgact atttattgat ttactacaat ttccccacta tgatagttga
    14041 tactgagacc actctgcaca tttggaacga acacattgaa ctctaggcta ccatctgctg
    14101 cttttgcctc tagatggctt ccaacaggaa caaggtcttc actctcagca tacaccaagg
    14161 tcacacgata gcggatacgc ttatttttat ccaaggcccg ccgaatctga ctttcaaaat
    14221 aattctgccc agttgaagtt tggtcgttag cttggttgga ccaagctgtt tgaactgcaa
    14281 tattcttagg attgctggtt gaagcatcga aaccagacaa tccaccaatc aaagcataac
    14341 ctaggaggtg cccacggtcc actgcatggt catattctcc agttaaatca tgaatctgat
    14401 gccaacccgc aggtgtccaa gaagtccgac catttcctgt ttcttcacgg tccttatact
    14461 gacgtgtaga tttggctaaa agcgcattgg ctactgttgg aaccgtttct ccctggactg
    14521 tctttgtctt attatcacca taaggaacac tggcaaccga tgcatctaaa tccgtttgat
    14581 taccgttaat aataaatgct ccagcaccat tccattcaat cgaattcccc agttgctttt
    14641 ttacatcttc tgtcaatacc gaactagcca gttcctgact aggtgtgctc tcgcttgcct
    14701 tagactgatt gacataatag gaataatcag caacgttact gctcttgtta tcacttaaaa
    14761 gatagccacc cgctactaca acaatcgtag ccaataagct gagcagactc atcgcttgtt
    14821 tttttacatt tttcttcgcc attttctctc catcaaaaaa gcaggtccag cctactttcc
    14881 tgtaaattta ccgattagtt cttgccactt agctggtgac aacaccgcaa atacattgtc
    14941 tccatctcct atgacaccgt aaccaaccat taatcctaaa acaaacacca aaatagcaat
    15001 caacaaaaca actgctacta agattaaatt tttaccaaca tagctaagat tatccttatc
    15061 cattttcatc ttctccactc acacgttcaa tcgttgcacc taaagcagct aatttctcat
    15121 gaaaacgata gtaacctcga tctaagtgcg ttaatttacc tacaatcgtt tcaccttcag
    15181 caaccaaacc agccagaatc aaagcggcac ttgctcgtaa atcagtagac ataacctgag
    15241 caccttgcag agcaagtcct cccgtgatga tagctgtatc tcgtaaaatt tccgaatgca
    15301 aatccatccg acgcatttct tccaaatgct ggaaacgatt ctcaaatacc gtttcaatca
    15361 tggtagattc accctttgca actgccatta gagctgtaaa ttgagcctgc atatccgttg
    15421 ggaagcctgg gtgtggcaaa gtttttactg ttacaggttt aagcttatcc acttgcgaac
    15481 gaactcgaat cccttcagct tcttccgtca cctcaactcc catttccaac atcttagaaa
    15541 tgagtggacg gttgtgctcc cagacagcgt ccttcaccaa gacatctcca ccagtcattg
    15601 ccgctgccac cataaaggta cccgcttcga tacgatcttg caccacttga tgttctgcgc
    15661 cagtcaattc ttctacacca gtaatcgtaa tcgtctctgt acctgccccc ttaactttgg
    15721 cccccatttt gtttaggaaa atagccaagt caacaatttc aggttctcgc gctgcatttt
    15781 ccaataccgt tgtaccctgc gccagagttg cagccatcat caaattttgc gttgccccaa
    15841 cacttgggaa atcaagatag atatgagctc cctgcaagtt ctctgcactc gcttcaatat
    15901 aaccagctcg ttgtttaatt ttagccccca tagcttgcaa accttttaag tgcaaatcta
    15961 ttggacggct accaattgta caacctcctg gcatagaaac cttagcataa ccattgcgtg
    16021 ctaaaatcgg accaagaata acaatagagg cgcgcatttg actcacatac ttataaggag
    16081 tttcgctacc aagtttacct gttgcatcaa tatcgatagt ctttgtttcc tcgtcaaatt
    16141 tcacacgaac tcccagacca cgtacaacat tattcattgt atagacatca gacaaaatag
    16201 gaacctgagt caatttggtt tgcccttgac ttgctagaac tgttgctgcc aataaaggca
    16261 gaacggcatt cttcgccccc tcaatctcaa cctgtccctt caaaccgttt ttactacctg
    16321 taacaataat tgtatccatt tcttatcctt ttcttactta aatcacatat ttgcaaaaga
    16381 gcgtcccatc atcaacaatt ctaaaaagaa agtcgagact aagtacccca gtgctattgc
    16441 cagaaagaga atcagcaaat tgattttacg ctgattgtcc ccagtcacct tcaaccaccg
    16501 cgaccaatca actgttgtaa ccaagagatg atgagccaga tagataaaca atatatgact
    16561 aaaaaactgt aaaattgaaa ttaccatgtt tccattatac catgaaatta aaaaatggaa
    16621 ctgaaccaag ttcaatccca tatatattaa tgtttcccaa cacgaatacg atttatcgca
    16681 cgttggaggg cgacagttgc acgcatttcc atatcaatat tacgagcagt ctgtgcttct
    16741 tccaattcac gttccgcgcg caatttggca cgttctgcac gactaatatc aatatcccgt
    16801 tcccgctcag cggaatcaga aatgaccgta ataatatcct tgttgacttc aatgattcca
    16861 ccattgaccg caatccagtc tacatggttt tcatcatcaa cacgacgcac tttcatttca
    16921 ccgatttcca aaactgcaat cagttcttca tgtccagaat agacacccat ctcaccatca
    16981 accgttttga ccaaaacaaa tgctgcatga tggtcatatt tgataccgtc tggtgttacg
    17041 atttgtacag tcatttgtcc cataagccac ctctagaatt tcattttagc agctttagcg
    17101 accacatcct caattgaacc aacatttcgg aaggcatctt ctggtagatg gtcgtgtttg
    17161 ccgtccaaga tttccttaaa gcctttcacc gtttctgcta ctggcacata agaacctggc
    17221 atacctgtaa attgctccgc aacgttgaag ttttgagaga ggaagaattg gatacgacga
    17281 gcgcgaccaa ccaaggtctt ctcttcatct gacaattcgt ccataccgag aatggcaata
    17341 atatcttgca attcttggta acgttgaaga acacgtttta cttccatagc cactgtatag
    17401 tgctcttcac caacaatttg tggagaaagc gcacgagatg atgacgccaa cggatccacc
    17461 gcagggtaga taccaagctg agtcaactta cgttccaagt tggttgttga atccaagtga
    17521 gcgaaagctg tcgctggagc cgggtctgta tagtcatccg caggcacgta aatagcctga
    17581 atagaggtaa cagaaccctt cttggttgag gtaatacgct cctgcaattg tcccatctca
    17641 gttgcaagtg ttggctgata accaacggct gatggcatac gacccaagag ggcagacact
    17701 tctgaaccag cctgagtgaa acggaagatg ttatcgatga acagaagaac atcctgccct
    17761 tccacatcac ggaagtattc cgcaatggtc aaaccagtaa gagcaacacg catacgggct
    17821 cctggtggct cattcatctg accaaatacc atggccgttt tttcaataac acctgattct
    17881 ttcatttccc agtaaagatc gttcccttca cgggtacgct cgccaactcc ggtaaataca
    17941 gagataccac cgtgttcttg ggcaatattg tgaatcaatt cttggataag gacggtttta
    18001 ccaacaccgg caccaccgaa gagaccaacc ttaccacctt ttagataagg tgctaggagg
    18061 tcgataacct taatccctgt ttccaaaatt tcgcttgaag tagataattc gtcaaaagcc
    18121 ggcgctttct tatggatagg ctcacgttca aaatctgccg gaaaagactc ttcaaggtca
    18181 atggtatctc ccaacacatt gaagacacga cccagcgttt ctttaccgac tggaacagag
    18241 atgggacgac ctgtatcgag aacttccatc ccacgtgtca atccatccgt tgattccatg
    18301 gcaatggtcc gtacaacgcc atcaccaagt tccaaagcca cttcaagcac gactttttgt
    18361 ttggaatcat catttttata tacaacgagt gcgttgttaa tctcaggaag tttatcttct
    18421 gctgcaaacg caacgtctac aactggtccg acaacctgag taattttgcc tgaactcatt
    18481 ctatttcctc tatttctatt actcaagggc tgaggcacca gctacaatct cagtaatttc
    18541 ctgagtgata gctgcctgac gagccctatt gtattggatt gtcaaatcgt taatgacatt
    18601 cttagcatta tccgtcgctg tctgcatggc tgtcatacct gctgcatttt cagcagtttt
    18661 ggcatccaaa attgctccat aaatagttga ttctgcatat tgagtcaaga gttgttccaa
    18721 aataacctca cggtttggtt ccaactcaaa ggtagctgta taaccatctg cttcattgtg
    18781 gtccaaatct tccacaggaa gcatctgttg tacacgcacc tgactggtca aactattgac
    18841 atggtggtta taacaaacat acaactcatc aaagagttca ttcttgtaca tctcaacaga
    18901 cttagaaatg attttctgaa cctcttcaaa acttgggttg tctgctaaac cacgcaattc
    18961 aaagacagga gtgataccac gagcacggaa aaaatcagct cccatactac caatagcaat
    19021 aatctcatac tcatcttttg agtcatggtc ctgttcaatc attcccatca cagccttcaa
    19081 aatactggaa ttataagaac cttttagtcc actgtcagag gtaatgacaa tataaccaga
    19141 tttttgaact ggacggcgaa tcagcattgg attgcttgta tctgaagcca tcaattctcc
    19201 acgcaagaga tccgttgtaa tctgacgaac cttgctagcg tagatttgaa aggattgcgc
    19261 taattgctct gatttggcta gtttagaagc cgaaaccatc tgcatggcac cggtgatttg
    19321 actggttttc ttagtagatg caatttttga cttgatttca ttgagagaac ctgccattat
    19381 tcactccttt acttaaagac agactggtct ttgaaagctt ggatagcagc attcaattca
    19441 tctgtatcag gaagatcttt tgttgtacga ataacatcca aaagaccatc gtagtgcaaa
    19501 tcaaaatatg cgtacagttc ttcttcaaat gccaaaatat catcgattgg cactgaatcc
    19561 aagaagccat ttgtcaaagc atacaaaatc aaaacctgtt tttcaactgg aagcggctta
    19621 tgcaatggtt gtttcaacac ttccacagtc cgacgaccac ggttgagttt ggcctgagtt
    19681 gctgcatcca aatccgaacc aaattgcgta aaggcttcta attcacgata agaagctaag
    19741 tcaatacgaa gggtacctgc cacctttttc atggccttaa tctgtgccga accacctaca
    19801 cgcgatacgg aagaacccgc atcaatggct ggacggatac cagagttgaa caaatcgtcc
    19861 ttcaagaaga tttgtccatc cgtgatagaa atcacgttgg tcgcgatgta agctgaaata
    19921 tctcccgctt gtgtttcgat aaatggtaga gctgtaatgg agccaccgcc caattcatct
    19981 gaaacctttg ctgaacgctc tagcaaacga ctgtgcaagt agaatacatc ccctggatag
    20041 gcttcacgac ccggaggacg acgaagcaag agagataatt cacggtaagc taccgcttgt
    20101 tttgacaaat catcgtaaac aatcaagacg tgtttgcctt catacatgaa ctcttctgcc
    20161 atcgcaacac cagcataagg agccaagaaa agcaatggag acggttgtga agcagatgca
    20221 gttactacga ttgtgtaatc caaagcacca tattgacgaa gggtttcaac ctgagtacga
    20281 acagttgact ctttctgacc gatagccaca tagatacaaa tcatgtcttg gcctttttgg
    20341 ttgagaatag catcaatagc tacagatgtc ttccctgtct gacggtcacc gataatcaat
    20401 tcacgctgac cacgaccaat cggaaccaaa gcgtcaatag ccttaagacc agtttgaagc
    20461 ggttcattaa ccgacttacg ttgcataaca cctggtgctg gatattcaat cggacgagtc
    20521 ttactagtac gaatttcacc aagaccatcc acaggttgac caagtgggtt gatgacacga
    20581 ccaatcaaag ccgaaccaac tggtacttcc ataattttac cagtacgacg aacaactgac
    20641 ccttcacgaa tatcggtaaa ttgtccgaga atgataatac caacatcgtt ggtttctaag
    20701 ttttgtgcca taccaatggt gccattttca aataccaaaa gctctccact catggcattg
    20761 tcaagacctt gcgcacgggc gataccgtca ccgatatagg ttacgacacc agtctctgtg
    20821 tagtcaaagt caggctgaaa gccttcaatt tgttgtttta gtaaagcgct aatttcttgt
    20881 gcattaatca aaagaacacc actttctatt ttctaaagtt tttttctaac gtccttcaac
    20941 tgtgtccgaa cgcttgcatc gattacctta tggttaaccg ttacaataaa accaccgagg
    21001 agactttgat caagttcttc cgtgatattg cgtacacgca aggaaaatcg ttgttctacc
    21061 aagtgacgga gacgctcttt ttgagcttct gtcaacggat agactgaaac cacacgggct
    21121 tcaaattcat ttttaaattt actgatttgt aattggacac gctcaagggt ttcaagaagc
    21181 aagtctgcat gaccatcacg aataacatct tcaatcaagt cattgatttg ccagaaacta
    21241 gattgacgta ccgtccttac aaagtcagcc ttttcttctc tcgatactgt cgctgacagc
    21301 aagattcgat tcagcttact atcatgaatg atggaaatca agtcagaaat ctggtcatac
    21361 atatcccaaa tatctgcatg atcactgact ttttcaacaa atgatagagc atatttttgc
    21421 acgatggcat tttctctagc gttcatctac ttgtctccta gtttgtccaa ataacggtca
    21481 atcaagttac tatgagcttg ttggtccaaa tcttccaaaa taattttgct tgcaagatca
    21541 actgccaatt cagcaacttg aacacgcaag ttttcttgtg cttcacgttt ttcagcttca
    21601 atttccaatt gagctttttg cttcaatcct tgaatttcaa catctgcttg ctcaagaata
    21661 cgttttttct ctagttttgc gcgttcaacc gcgtcttgaa taatcttttg actttcaata
    21721 cgtccctgta ccaactcatc ttcacgttgt tgaacaaggt ttgctgctgc tgttaatttt
    21781 tcttctgcag catcaatatc gttcgcaatc ttattggcac gttcttcaaa aatacctgta
    21841 attttatccc atgcaaaaac acgaataaga ataataagta ctgcaaatga ggctgttacc
    21901 aagataaagt ttccaagaat ggtactagat tgcattgtaa tagttgttgc catagttgtc
    21961 tttccctttc ctattcactc tcactactga tttttttatt taagtacata gataccaaca
    22021 tgataaatac atatccctgc aagcatgaaa tgaatacaga aaatgctgtc caaacaacgt
    22081 tcagagcaaa ggcaattgga tatgcaagtg cactttgttg agataattgt agaagaagag
    22141 agacaagcac ttcaccagca taaatgttac cgtacagacg aagagcaagc gacacaaggt
    22201 tggtcacttc ttccaaaatg ttcattggag ccatagccca gggtgtcaca aaagatttga
    22261 ggtatgcctt gaaaccgcga cgacgaatac cctcaacatg acaaaatact gttgcaattg
    22321 ttgccaaacc gaaatcgtaa gccatattgg ccgttggaga agtccacaaa ttatgtcctt
    22381 ctgctgtttc caatttggtc atcaaaccta gattattggc aaccaaaaga aaagtaaaga
    22441 ctgtaaagaa gaacaaggaa taccgctttg cttccgcatc gccaagattc ccttttgtaa
    22501 aattgatagt caattcgtaa acgtactcca aaacattctg ttttcctttt ggcttgagct
    22561 ccatccgacg actagcccaa aaaacaagta agaaaataat ggaaatggta atgacagaaa
    22621 ccaataccat ggtcaggtca aaggttacgg gaccaagggt aagggttgga cttaaatgtt
    22681 cttccaatgg aggttccccc cttttctatt tctctatttt ctactatttc aagacaaatg
    22741 tcatagccaa ggttacgaag aaagttccct cgataaaggc aacacccaaa aatacaccag
    22801 ccatcaattt actttgcatt tctggttgac gtgcagtcga actaaggtat gaagccacca
    22861 acagtccctc accgatactt acaccaagac aggccaatcc aagggccaat gcgcctaaac
    22921 tcataacgaa ttctcctttt aaaatttaat accatgtaag gatactccta aaacatctat
    22981 ttgtcaagaa aataccgcca ttgtaagcgt ttaattcgtt tttgtaaaat aaaaagaaaa
    23041 gagtatttca tcttttcttc ctatttaata gcttcatcaa tatggtctgt ttcttcgatg
    23101 aatcgtttgg ccatatcttc tcgattcatc tgatcagtat caagagtgat tgcatggtca
    23161 gaaaccagat ctgtatctgc gaaaaactct atatggtttg ataggttgta cagacgtaca
    23221 ggggcttccc caccaaactc tccatctaga ttgagcagta gacggttatc tgggttaaga
    23281 ttttcgatgg ataggctctt ggtttttatg tattcaacta aatcactctc aatgtgtttg
    23341 ccaccatcta agacttgacg aatcagatgc agaatttcaa atagattccc tgttttaacc
    23401 atcaataaag taaaattacc atcatctaac ttagcatcag gaacaatctg ttcaaaacct
    23461 ccaattgaat tggttaaggc aacaaaaatc attgaaaccg agccttcaaa tactccctcg
    23521 tcatgctcta cacgaacagg tgtaaattgt acttgtggca ggagttctgc tccttttacc
    23581 acataggcca aatagccaaa catggtctta agttgactgg gaacactgta ggtcaactcc
    23641 gtaagtgtac ctgccgcagc aatattgata aaataatgtt cttgatgaaa accatttttt
    23701 tgatttttgg ctaaaccaat atccattaaa atggtctgct gcttaccgat aaccttagct
    23761 gcttctacag gatttcccct aggcactttt aaggcacgcg catagtcatt ggtggtgcca
    23821 gtcggtatga tggccatctg cggacgtttt tcaagcggag caattccatt gacgacttcg
    23881 ttgattgttc catctccacc agccgcgata atcaagtcaa agcctgcaag cgccgcacgt
    23941 gtagcttcat tctttgcaga gtctttctca gcagttgttt ggaaagctga agtttcataa
    24001 ccgtagcctt ccaaaatttc caatacttcg gccacatttt tcttcatgat ttcttgacct
    24061 gaggtcggat tatatattag tctagcacgt tttctttctt ccatcgtttt acctttacaa
    24121 gctctctaac caagcctcgt ctttaatttc gatacctagc tcctgtgctt tggtcaattt
    24181 actgcctgca tctgttccgg caaccacaag attagttttt ttagaaacag atcccgctac
    24241 atttgcccct aaagcttcta atttggcttt ggcttcgttt cgtttcattc gctccaattt
    24301 accagtcagt acaactgtca tacccgatag cgcagcattt tcatctacta cttgtccgag
    24361 ataggttaag tttaccttag cttccttaag ttcggctaaa agttgttgcg caccctcact
    24421 agcaaaaaaa gttgtcaaag acttagcaat aacctgacca agaccttcta gcgaagcaat
    24481 tgcttcttga tcagcaaatg ctagagtttc taaatcacca aatttttcta ctaaaatctt
    24541 acttgcctta ctacccacat ggcgaatacc tagtccaaat aggaggcgtt ctgctgagtt
    24601 gctcttagaa gtttgaatgg cttgatagag cttgtcagct gatttttctt tgaaaccttc
    24661 caaggtcaat aggtcatcaa cagttaattt ataaatatca gcaacatcgt gtaccaagcc
    24721 tgctccaaag agtttttcaa cgattgaaga ccctagccct gcgatgttca tggcatctcg
    24781 acttgcaaaa tgttccaact tactcatcag ctggctagga caaatagggt tgatacagcg
    24841 gagggcaact tcgtcctcat agtgttgtag gtcgctctga caagacggac aatgactagg
    24901 aatgggcatg atttcttgct cttttcgata cttgtccacc actttcagaa ctgctgggat
    24961 aatgtccccc gccttgtaga caatgaccgt atcgccaata cgaatatctt tttcggcgat
    25021 ataatctacg ttgtgcaagg tcgctcgact gacagtcgtt cctgccagtt gaacaggact
    25081 aagattggca gttggtgtca caacacctgt tcggccaaca gtccaatcaa ccgacaagat
    25141 ttctgcttct ttctcctcag ctggaaactt gtaggctact gcccatcgtg gcgctttaac
    25201 tgtaaatcct agttcttctt gtatagctaa atcatttacc ttgatgacaa caccatctat
    25261 ctcatagggt aaatcatctc tacgctctgc tattttttca ataaaatccc acgtgtcatc
    25321 aatcgactcc gccaagcaat attcgtggtt ggtcacaaat cccagagcat ccagtttctc
    25381 cagtacttgt gactggctag tcacttcaga tggactagcc tcttggtaga ggaaggtagc
    25441 gagaccacgc tgggccacca ctcccgtatc aagctggcgg agggtccctg ctgctgcatt
    25501 acgtggatta gcaaattcag cttcaccagc ctcctgacgc tggttgttaa cacggtcaaa
    25561 ggaagccttt ggcatataac actcacctcg gacagtgatg tccacagctt cgggtagggt
    25621 caaaggaata tcagccactc gtttgagatt ttctgtgata ttttcaccga cactaccgtc
    25681 accacgtgta gcacccacga ctaaattacc tgcttcatag gtcagggaaa tagatagacc
    25741 atcaatcttc aattcacaga tataagttgc ttgaggaaat tccttgcgaa ctcgctggtc
    25801 aaaagcttct aattcttcac gagaaaaggc atcctgcaaa ctaaaaagag gataaacatg
    25861 actatatttt tcaaatccgt ctagcacctt tcccccgact cgatgggtag gactgtctgg
    25921 taaaatcagt tctggatgag ctgtttccag ttctactaat tcacgataaa gcgtatcata
    25981 ttctgcatct gatacgctag gttggtccaa ttgataatac tctttagcgt attgattgag
    26041 cacgctaact aattctgata ttcttgtttt cataagaata ttatatcatg atttgagggt
    26101 gcgaactata tttgcgcttc aataaaaaca gattccttta gataattttt agcaaaaaat
    26161 gtataatgtg tatataaaat ttttggaggt gccctatggc tgtaacctat aaacgacaag
    26221 atgatttaga aaagatgctg gaagaatttg cttcatttga aaaattggaa gaaattgagt
    26281 atccagatcc aaaatcaaaa gaacattccg agaaaaacaa cttgaatcag gataaaaaat
    26341 aatatgttcg gtcttgatca attacctacc tccgtcctac aggcgggggc tattttcctg
    26401 tctatcatga ttgaagcctt gccctttgtc ttgattggag ctattatttc aggttttatc
    26461 gatgtgttta taacaccaga taaggttcgt aaactcttac ccaaaaacaa gtttcttgcc
    26521 attctatttg gaacctttat cggcttcatt tttccgtctt gcgaatgtgg tattgtccct
    26581 attgtcaatc ggctattaga gaaaaaagtg ccgagttaca ctgctgttcc cttcttagta
    26641 acggctccta tcattaatcc catcgtcctt tttgcaacct ttaccgcttt tggcaattcc
    26701 ctacttttcg ccctctatag agccctagga gccatcattg tatccctagt attgggaatc
    26761 attcttggtt ttttcgtaaa aggaccaatt cttaaaggaa gcaagtttga ccatcaccag
    26821 catgattatt cagataaaac cagctggcaa aaagttggct tcgcacttat tcatgccatt
    26881 gatgaatttt ttgatacggg acgttaccta gtctttggtt gtctctttgc cagtctcgta
    26941 caagtctata ttccaaccgc tgtcctgact accatcggtc atagtccatt aacagctatt
    27001 ttactgatga tgttgctggc ctttcttctt tccctatgtt ccgaagccga tgcctttatt
    27061 ggtgcatccc tactatccag cttcggattc gccccagtaa tggctttctt agttatcgga
    27121 cccatggtgg atgttaaaaa cttgctcatg atgaaacatt atttcaaggg aaaatttata
    27181 tccggtttta tcattactat cactctcgtt attttgggat atagtctgat acttggaggt
    27241 gtagtatgat tcgtttttta attcttgcag gctattttga gatgaccatg tatctttata
    27301 tctctggaaa attagaccaa tacattaatc tacactatag ctatctagcc tatctatcca
    27361 tggttttatc tttcatactt gccatcgtac aattgtatgt ctgggtaaaa gaaattcgag
    27421 tacatagcca tttaaaaagc aaaattgcca aactatcaag cattggacta ttgctcattc
    27481 ctcttgctat agcctggctc tttcctacgg tcagcctgga ttcaacaact gtcgcagcca
    27541 agggctatca tttcccacta gcagcagaaa acgatactaa tacacaaaaa caagaaggga
    27601 cgactgttca gtatctcaag cctgatactt ctatttattt tacaaaatct gcttatcaaa
    27661 accagatgcg tgaaattgct gatagatact tggctgaaga aaccattgtc gttactaatg
    27721 aaaactatat ggaagtgatg gaagcaatct acgactatcc tacggaattt tcaggaaaaa
    27781 cgattgagat gattggattt gtctacaatg accctgacaa tagccagcaa tttttccttt
    27841 tccgctttgg tattattcac tgcatcgctg attctggggt atatggctta ctctctacgg
    27901 gggctaccac agaatttcct aacaatactt gggtaaaagc cagaggaaca atcaagattg
    27961 cctaccatac atcgttgaaa caaaatctcc caacacttga attacaatcg atggttcaga
    28021 ttgaacagcc agattccccg tatgtctacc gtgttttcta ataattccaa ttcaaaaagt
    28081 gaattttctg acaatttatg ctataatagt gtctatactc aacagatagg aatgaaatta
    28141 tgtcatcaca tgtattgttt acaatttttg gtgctagtgg cgaccttgcc aaacgcaaac
    28201 tttacccatc tttatttcgc ctctataagg ctggacacat caaggaaaac tttgcagtaa
    28261 ttggtacagc tcgtagaccc tggaccaagg aattttttga gcaaaccgtc attgaatcac
    28321 taggtgatct gcctgacaca ccacgtcaag ctcatgaatt tgctagtcat ttctactacc
    28381 aaagccacga cgtcaatgac acggaacatt atgtagctct tcgtaaattg caggacgact
    28441 tgtgtgaaaa atacaatacc cagcacaaca aggtcttctt cctctctatg gcgcctgaat
    28501 ttttcggaac cattgccaaa cacctcaaat ctgagcagat tgttgacgga caaggttttg
    28561 aacgcttgat tattgaaaaa cctttcggaa ctagccttgc tacagctacc aagctcaatg
    28621 atgaattggc agcagccttt aatgaagacc aaatctaccg tatcgaccat tacctaggca
    28681 aggaaatggt acaaaatatc tttgcggttc gctttgccaa tattattttt gagcatattt
    28741 ggaaccgcga ttacatcgat aacgtccaaa ttacatttgc tgaagcgatt ggtgttgagg
    28801 atcgtggagg ctactacgat cattctggcg ccttaaaaga catggtgcaa aaccatgccc
    28861 ttcaagttct ttcccttcta gcaatggata aacctgccag cttcaaggag gaagatgtcc
    28921 gcgctgagaa aattaaggtc ttccaacact tgcgtcagcc ttctgacgaa gacctcaagc
    28981 gcaacttcat ccgtggtcaa tatgcagcag gttccatcga cggaaaagac tacgttagct
    29041 acttggatga accaaatatt gccgaaggtt ctcagacaga aacctttgca ggaggtgtct
    29101 tcttcgttga taccgaccgt ttccgtgatg tacctttctt cttccgtaca ggtaaacgtc
    29161 tgacagaaaa gggcacgcgc gtaaccatca ccttcaagca tgcggaagat atttttggtc
    29221 agccttctga ggccaatgta ttgaccatat ttatccaacc aactgaaggc ttcatgcttt
    29281 ctatcaacgg taaggaagtt ggttcccact ttgctcttac tcctgccaaa ctcaacttcc
    29341 gccacaatgc aactgctctt ggaaattcac ccgaagccta cgaaaaacta tttttcgatg
    29401 tcctaaatgg tgattctacc aactttagcc attgggaaga agtgaaagca agctggagct
    29461 tgattgaccg cattgttgat ttgtgggcaa gcaaccaagt cccactccac acctatccag
    29521 ctggaactat gggacctgag gcagcctttg atttgctaga aagctacggt tgcaagtggg
    29581 tttggacacc tgatgtatgg tatcgtgaac gtggtttatt gaaatagtca tttagtttat
    29641 ctttgattac ttcgttaact cgctttgccg tactccacga aagtgacttg cttcgcatgt
    29701 cttatttcca acctagaaca gcctctaggc tgttctagca acctgcacct cgttgccttg
    29761 tactaaaagc aaactaaacg actacatata aaactggagc aatccagttt ttttcggaga
    29821 taattatgac tgaattaaac accattctca cacaactcca agcagccagc cacactggca
    29881 ccctcaagcg ttatgaaaaa attggcgaaa ctaagcccta ctacggcgtt ccaatgggag
    29941 ctatttctgg tatcgccaag gcctataaaa atcgactgga cttatttgcc ccactctggc
    30001 aaacaggtat tttagaagct caatacctag ctattcaagt tgccaaggct aaatctaacc
    30061 aacttgccca tgctgatttg gaaacttgcc tcaatgaagt agtttctgtt aatgtgctag
    30121 acaaactggc ttctatcatt ctcagcaaac gaaaagacag taggaattgg gaagaaacct
    30181 tacttaccaa agaccaagct atttttcaac gcctaggttg gttcctccgt gctaaatatt
    30241 ttgctggaaa aacagcaaca aaccaagaaa ttgaagaaac tctagaacat attcgcctgc
    30301 atttgcaaac cgctgacccg cttgtccaat ggaccatgaa ccaatgcttg gtggagattg
    30361 cagttgccta tcctgactac cttgaacaag gccttgcaat cggtcaggaa ctcgctgtct
    30421 attccgatat gaaggcgcca aaaggctgta tttctgccta cgcacccgac tggattgagg
    30481 cattgttgag gaggaaataa gatgcaacat aaaggaactc agattttaga aacagaacgt
    30541 ctaattttac gcccttttca agcaagcgat gttgaatcag ttttccaaaa ctggacttca
    30601 gatgaaaagg ttaccaccta tctgacctgg ccaactcatc agacactcca agatactgaa
    30661 gactatgtcc agttctgtct tcaatcctat tcacaggaaa aaacatacag gtgggtaatt
    30721 gagctcaaag aaaatcagca ccccattgga gatatttccg ttgtcagcct tgatgaaaga
    30781 gtccaagctg ccgaattagg ttgggtgttg ggcagtaaat ggtgggggca aagttatatg
    30841 accgaagctc ttgaagctgt taatcactat ttattggagg aagtgggttg tttacggatt
    30901 acagctgttc acgatagtga aaatcgtcct tctggtcgtg tcatggaaaa agtcggtatg
    30961 acctacgaag gcactctccg ccaagccgct cgaaacaatc gtggtattgt ggatattgcc
    31021 atttactcac tgctgcatac agatagaaaa agtcgctagt tcattgaact aacgactttt
    31081 ttctatacca atccttccaa tagcccacgc atgaattctt cggatttgaa ttcaccgatg
    31141 tcatcgattt tctcaccgaa accaatcagc ttgactggaa tatctagttc ctgacggatg
    31201 gcaaggacga cacccccctt ggctgtaccg tctagcttgg tcaagactag cccagtcaat
    31261 ggggtaattt ttgcaaattc cttggcttga ctaagggcgt tttgacctgt ggaagcatct
    31321 agtgctaaga gggtttcatg cggtgcatca ggcagagtcc ttttgatgat gcgaccgatt
    31381 ttttccagct ctgccatgag gttttcttta ttttgcaagc gacctgctgt atcaatcatg
    31441 agaatatcca cgccttctgc cacggcacgt tttaccccat caaaaaccac actagctggg
    31501 tctgactttt caggtcctgt gaccactggc acatcgacac ggcgacccca ctcgaccagc
    31561 tgggctaccg cacccgcacg gaaggtgtcc gctgcgacca acatgacctt cttgccagcc
    31621 tgcttgtact tgtaggccaa cttaccgata gaagtcgtct tcccaacacc gttgacaccg
    31681 acaaagagca tgactgtcaa atcatcttgg aaattgatcc gctcgctgaa ttgaccgtct
    31741 ttttcgtaaa tatccaccaa tttttcgatg ataacacgac ggagttcgtc tgtcttctta
    31801 gccttctgta gcttggcctc atagcggagc tcctctgtca gcgtagaagc aacttgcaca
    31861 cctacgtctg acaaaatcag catttcttcc aactcttcga aaaattcttc atctaccgaa
    31921 cggaaattgg caaagaattc attgagcctt gccccaaagc ctgtacgcgt ctttttcaag
    31981 gtacgctggt acttgtcctg ctcactttct tgctctactg gagcaacttc ctcaacaggc
    32041 tcttccttga ccttggtttg aatagcaggg tcaaagcctt gttcctgcgc ttccttcact
    32101 cgagccgcag cggcttcttt ggctgcataa tattgagcca tcatgtctaa ggttcgttgt
    32161 ttctgagctt cttgttctgc tgtcaattca ggctctgcta cttcagactg gaactcttcc
    32221 atttcttgag tagctgactc aacttcagta gttaccgtat cttcgctaga agccgactgc
    32281 tccctttcca cttcttcaac aagagcgact tgctcctctt gtttttcttg tccaaataat
    32341 cgatcaaata atcccatact agtcctcatt caatacatag tgcttgatgg cccaagcaat
    32401 gccatcttca tcattggttt ttggcaggac aaggttagcc gcagacttga tttcatcagt
    32461 cgcattggcc atggcaacac ccagaccagc ccattcaatc atcgaaagat cgtttccttc
    32521 atcgccacag gccataactt ctgactgatc aatccccaga tgtccaatca acttagccaa
    32581 accatttgcc ttatgaacac cttttggact ccattcgagc agaatatcac gcgacttgaa
    32641 aatctcgaag cgctcgtgaa gttccgcagg tatttttgga atttgtccat ccaaaaagtc
    32701 tgctgccaca gctgaaactg ccttattgta gacaaaatct tctggcattt cctcatcgct
    32761 tgccacaatt ttattaagca atggattaca agttagataa agtgattcat gggctgatgg
    32821 tagagaatag acatcgccac catagagaac atccagaggc aggtccaagt catttgtcac
    32881 acgacggatg gtgcgcacat cgtcaatggt gaagccaacc ttatccaaaa cccgacctgt
    32941 attttcctgg actagaccac cgttaaatgt aatcgaatat tgattctccc ctagcagatc
    33001 tagttcttct agaaaagtac cgatagcttg taaaggacgc cctgttgtca gaactacata
    33061 aactccacgc tcacgcgctg cctgcaaggc ctttttatta gcttctgaaa tccgtttgtc
    33121 cgatgtcaga agtgttccat ctaaatccaa tgcaatcaac ttaattgcca tttacttcct
    33181 cctctaaata ggctaatact gctccatcat tgcaatgacc aatcatcaaa tctgcccgag
    33241 ctttcacttc ctctcttgca ttttctgtcg caagagccag acctgcaaag tcaaacatat
    33301 ccaaatcatt ttgattatca ccaaatgcca ctacatcctg acgggtaatt ccaaaatgat
    33361 gacacaaatg actcaatcca actgatttat ttgaaccatt tggaattata tcaatattgt
    33421 caaaaccagt tgtcatggcc gttacacctt caaatgtatc atttaaccat cgtctggcat
    33481 cgtccatttc ctcaggagaa aatttggcat tgatttttat aatctcttct cgaacttctt
    33541 caaatgtgtc taccaatcga aaatgtgcgt aataattcgt catcgcttct aaaaactgag
    33601 gctcagcatt ttttaataaa taaaagtttt cgagtccaga cagcaccatg gactgactgc
    33661 taccaaaggg acctgcatca atacccgcga taatcggcag ataaatttca ggactaattg
    33721 gatcatccat aaagatagtc tgcccctgat attcaacgat tgaaccattt tctgccacaa
    33781 acccgatttc atctacaaaa tcttcaaaaa caagtttcag gctttgcata gatcgcccac
    33841 ttgctgccac aaataaataa cctttttctt taaactgatt cagtatacga cgaaaccgtt
    33901 ccttatcaaa actatggtct tctcgtaaaa aggtaccatc catatcactg gcgtaaattt
    33961 tgttaatcat aatttctcca catctttcag cttaacggaa acaatcttgg acacgccaga
    34021 ttcctgcatg gtcaccccat acatggcatc cgctgccgcc atggtccctt tacggtgggt
    34081 cacgacgata aactgactct ccttatcaaa acggttgagg tagtcaccaa aacgtttgac
    34141 attcgcctca tccaaggctg cctccacctc atcgagaatt acaaaaggaa tggtcttaac
    34201 acggataatg gaaaatagca gagcgagggc cgaaagggct ttttcgccac ctgacataag
    34261 attgagagat tgaattttct tacccggagg ttgaactgaa atctccacac ccgcagtcaa
    34321 taggtcacct tctgtcaaaa tcaaatccgc tgaaccaccg ccaaacattt gtttgaatgt
    34381 ctgcttaaag ctttcacgaa tagcttcaaa agtaaccttg aagcgctctt tgacttcatc
    34441 atccatctcg tggatagtat ctagtagtaa atcacgcgcc gacaaaatat ctgtccgttg
    34501 ctcattgagg aaggtaaggc gattattaac ctcgtcatac tgctcaatag catccaaatt
    34561 gactggaccc aaagcacgaa tagctctttc taggtctttg aggctttgtt cagcaactgc
    34621 aagattctca acttccttgg cctgagactg ggcagcttca aaactcaatt tgaaatgctc
    34681 tgtcaaatta ccaagtaaag tccgtaattt atcgcccgct tgctcacaat ccgcctctaa
    34741 cttagcctgc ttacgaatca aatcatcatt cttagtccga gcttgttgca atctttcttc
    34801 caagtcttca aactgcccat caatatcttc caattcaaac tttaagcgaa ttagaatctg
    34861 attggtctgg ttttgcttat cagatgcggc ctgcaattgt tcttcaagaa tctcaatact
    34921 agtatcttca agagcttcta gcttctggtc aatcatatcc tctaaaagag aaatttcctt
    34981 atctgcaacc actttttctt cttgcaaacg tctcaaatct gtctgttcaa aacgaagttg
    35041 gctagtcagt tcagcctgtt ccaaagttag ttgacccttc tgagtctgta gtttctgcaa
    35101 gctttcttga atactgtcgc gattatcacg gacttgattg atttgttgat ccaaggctag
    35161 ttttttctca ttcaaggctt ggacatttac ttcttcctta gcagcagcct cttctagctc
    35221 agtcaaaatg gtcggactga cctgactcat ttgcaggtca tactgggctg atagctgagc
    35281 cagtctattt tctgcctgtt cctgatgaat ccttgcgctc tgctggttca atctagcttc
    35341 ttccccctcc gccttaatcg tttccaaggc ttctctggtc tggtctaagc tagttttctt
    35401 agctgcaacc aagctttctt gctcctgcaa ctggctagac agctctgcta tttctcctaa
    35461 aagagcatcc agttctggtt tgataaaggt cgtgctgtta tttcgattac taccaccagc
    35521 aaaggctcca ccaggacgga tttccgctcc atccatggtc accatacgca cttgaaactt
    35581 ggttgcccgc gccgcctgat tggcatagtc aatggtatca aaaatcgcga tagtacctag
    35641 caaattttgg aaaatcgcat ctaaatttgg ctgataagtc accaaatcac ttgcaagccc
    35701 caagaatcct tctgaagatt ctagtaaaga gacttgctgt ccagaaagct gacgtggctt
    35761 gatagttgtt agaggtaaga aggttgcccg tccttgccgt ttttctttca aaaatgcgat
    35821 agctcgttta gcagtcgctt catcttcaac gataacgttt tgactagcac cgccaagagc
    35881 aatttccaaa gccgtttggt aacgagtatc aaaggtcaat tgttcactga ctgctccaat
    35941 aattcctcct aagcttggtg ccgcctgtaa gacagcctta acccccgcgt agaaattgga
    36001 atgatttttt aaaatagctt ctaaactaga ctggcgagcc tgcttgcctt tcaactgatc
    36061 cagcaaatca aacaagcgac cttgctcagc ctgataagca gtctgggttt gatctaattc
    36121 cgattttttg atctgatagc tctcaagcaa ctggcgtaac acgtgatcag cttcttctaa
    36181 acttttccga ctcttatcaa gtacttcttg agctgtttgt ttttctgtct gcaagcgtgc
    36241 caagtcttca gatttactct ctgaaagact gatttgattg gcaatatcct gctgaatctt
    36301 ggtcagacgg tttgaagctt ctgcctcttc ctgcatcaga gcaacatact gttcacgtag
    36361 atgatctaaa acctgatcag gatcttctga aaagtaggaa atttctttgt ctaccgcagc
    36421 aatatcgtct ttcaagctag acaaggaact atctaattgc gcaagcgttt cttgcttttg
    36481 ctcaatctgt tctgccaact gctctcgtct agtcaacaag ttttccaaac gcgcctgcgc
    36541 ttcttgacga cttgattcgt tttgactaga ttccagttta tggacctcaa tttttcgctc
    36601 caaatcactg attaacttgg tcaaatctaa cagaactgcc tgttcacgct ccaattgttc
    36661 tgaaaggcgg tggcgcttct ctttcaagtt ctgattttct tgctccagct cagaacgctg
    36721 tttgtagtag ctagtcaatt cagttttgac agactctagt tcggcttctt tttccgataa
    36781 cttttcctta ccaagcgaca actgagccac caaaacatct aagtataatt ccttacgttg
    36841 accatctaat tctagaaatt tcttagcagt ttgtgcctgt ttctctaatg gtttgacctg
    36901 gttatccagt tcatagataa tatcatccaa gcggtccaag ttgccctggg cctgtgccaa
    36961 cttactttct gtttcttttt tacgcgtctt gtattttaag acccctgccg cctcttcaaa
    37021 aatagcacgg cgttcctcag gcttggaatt gaaaattgct tcaacccgcc cttgtgaaat
    37081 gatagagaaa gaatcacgtc ccaagcccgt atccatgaaa agatcatgaa tatcccgtag
    37141 gcgaaccttt tgcccatcaa tcaagtactc actatcacca gatcgataaa tgtggcgttc
    37201 taccttgatt tctttctgtt tattggcgat aaaacctgtg ctattatcca aggtcacgac
    37261 aaccgaggca tagttaagag ccttgcgact ttctgttccc gcaaagatga cgtctggcat
    37321 cttgcctcca cgtaggcttt tagcagacga ctctcccagg gcccaacgta gactttctgt
    37381 aatattggac ttgccagaac cattcggccc tacaacagca gtcactccac gatcaaagac
    37441 taccttagtc ttatccgcaa aggacttaaa gccctgcatt tcaattgatt ttagatacat
    37501 acctatcctc tagcctccac agcatttttg gcagcggctt gttcagctaa tttcttagag
    37561 cgaccacgac cacgaccaat cacacgttga tcagcagata cctccacttc aaaggtctta
    37621 tcatgggcag gtccagactc agctattact tgatacgaaa tagcaatctc accattgacc
    37681 tgcaaaattt cctgcaaagc agtcttatag tcggtcacgc gctcaaaatt ccctttttct
    37741 aaacgaggaa tcatgacctt atggataaat tcctctacgg tcttttcccc cttgtccaat
    37801 agcagagctc ctaagaacgc ctcgaaagca tctcctaaaa tagtatcgcg atttcgccct
    37861 ccagacttct cttccccctt accaagacga agaaaccgat caaaaccaca agcacgtgaa
    37921 aaaccagcca aagactcctc acgtacaaag gtcgaacgca acttggacat ctcaccttcg
    37981 ggtctatcag gatatttttg atagagatat ttggaaatca ttaattggag aacagcgtct
    38041 cctaaaaatt ccaagcgctc attatgtgaa atttttagaa ggcgatgctc attggcataa
    38101 gaagtatggg taaaagccgt ttctaataaa ttcaaatccg aaaaatcaat cccaaaatca
    38161 gccaataatt ttgcatgtaa atctttcatc tatatgctcc tttctaactt aaacgaaata
    38221 gatgatttac atttactccg tcctaacatt ataccatatt ttccactgga cttctcttgt
    38281 caactaagtt tcagccagca cctctccata tctttttgca aacatttaca tattcatcag
    38341 atttcgataa aatagaagaa aaaagaagaa cgttagcatg caaaataaga caaaacaact
    38401 caatacatca ctgctctccc tcatccagtt catcggagcc attctcgtta tcgccctcca
    38461 ttgccgcagg ttatttgaag cagaccagct ccacttcatc caaaaatcaa tctttagccg
    38521 catggtcgtt ccttacttca tggtcaccgc cagcttcttc ctccgacgca actaccccag
    38581 cctctccaaa caatacctga tccgctacag caaacagtac ctgacctggt ccgtcctcta
    38641 cctacccttc tacctcttct acctaaacct ccaagaaatc cccctactct actatcccct
    38701 cgcactccta gtcggactga cctacaccgg caccagctac caactctggt acatgcccgc
    38761 cttcctgcta ggtcttgtcc tcgtccacta ttctttaagg aaatggggct ggcgcatcac
    38821 agtatgtcta gcctccctcc tctatctcct aggctcagtt gaaacctact cctcctacct
    38881 ggcagaatcg attttcctga ccgcatttga cagctacaaa accttctttt tcaccagccg
    38941 caacggcctc ttctacgcac cgatttttgt cctgacaggc ttttatctag ccgacaaact
    39001 caatcacccc attttccaat accgacaaaa aaacaaacta cttgtctgca tagccctttt
    39061 agcttttgaa gccgctgtca tctatctcaa tcagggctac gacaagaact ttctatttag
    39121 cctgattcca ttcacagcct atctagtcgc ctggacccta accacagacc tcttccgcca
    39181 gaaaaaattc caatttctca aagaatacgc cagctattat tattttatcc atgttatccc
    39241 agtcgaaatc agctttttct tcctagaaac tagttccctg accagaatac aacaaggttg
    39301 gttagtcttc cttatcaccg tcatcacttg ccaactgctc agctggttaa tcattaatac
    39361 tcaatgaaaa tcaaaaacag actagctcca acagtctggg aatagactgt tggaggtcgg
    39421 aaattagacg aacttggttc gtgaccgtaa gatgcggata gaacactgtt ccttattata
    39481 tttcaaggga acaggctgaa aagatccact ggaccttttc actcatcaaa tcaagtcaac
    39541 aacgtctaat tttgattttc gaagggtata agcacaaaag aaccttgtaa gatctaactt
    39601 acaaggcttt tttacaaatc aaaatcctct ttcaacttat caatcacctg ttggagcagg
    39661 tcgcgattga cactgtattt gacgttcttg tctttggcat taaagagaag caggtcgccg
    39721 ttaatcaact tttgggtatg gaaggacaca gcggctccag taatattgag ccgttctgca
    39781 atgtccttac tcttagcatg gggcttggtc agctccacca agacctgata acgcgtacta
    39841 tcgctgatga ctttaagagc cgttgtcaaa tcatccagat ccaactcgtc atttgacagc
    39901 atcatctgat caattcgaca ggaagccaaa agagcgactt tcatatagtc aaattcttcg
    39961 ttgccataat aagcaaacca ataattccac ggactgagaa cgaagaattg ggcagtttct
    40021 acacccaagc tatccaagct ggtcatggct aactgcttgg attctctgta gagttgttca
    40081 atgtcaaaat ccctagcaaa ggcttcccgc tcaactcttg cttgctcaaa atagggctgg
    40141 tagattggaa gcatcttatc caagagatgg acagaccgct gaaccgtttc caagggattg
    40201 cggatagcca atgaccagta ccacttatct gctggctttt tatctgtctt ttccaagagt
    40261 tccatgaggc tgaggtcctt ctcacgatga ccgtcatttt cagacgctag catggtccgc
    40321 atggcatctt ctacctcttc ttgcgataag gccaagatca gctgacaagc ctcctcgact
    40381 gtctttggat cctgcccatc attcaagata tagaaataaa gactatgcaa aatgttaaaa
    40441 atatgtcccc agacaaagac ttgatcgact tcctgacgaa aatctaccaa cttttcttca
    40501 atctcatcac gaatgtccaa ggcatcttta agaatgtctt tttctttctg tgaaaaatcc
    40561 gcctcaatcg gttcctcacg ctccttgaca atcaagggaa tgaacagttt ttctacaatt
    40621 tcgcttctat aatctcggta atctaatttc atacgcatac tttctaaact tgagctactt
    40681 catttttagg tttacgaccc acaagaatag tatagcttac tagtcccaca gaaagcaaga
    40741 ggaagatgag agaaatactt gtcacagaaa gcaccgtcac cataagggca accaaggctt
    40801 gacctgctac catgccaata ttaaatatgg tccccattcc tgcattaatg gttgctaatt
    40861 tatcttcggg tagttcattc attatcaggg catacaattt tggattgata atcccagtcg
    40921 tcatggtagt gactaagata gtcgccatca caatataaat attatgaaaa taaaaaccaa
    40981 caaacaggat gaccgccaaa cctgtacaac acttgagcag attggataag ctgatatttt
    41041 tgaagaaagc catacctaga ctagagccaa gaatgtaacc aacagaaaat aggttaaaga
    41101 ccaaggcaag tgttatgcca gaattgacaa tcacgaagtc tgaaaactcc ttcatagcca
    41161 ggataaccaa gggagatacg gcactaacaa ccgtattgat acccgaaatg gtcagaatag
    41221 aagcctttag tacagggatg ttttgaatgg cttgataaga ttctttaagg ctctgaccaa
    41281 ctcccttaat aaaccctgct tctgttttag tttggtcagc ctcttggata ggattttctt
    41341 tcaacaactt ggcaaaagct ggacgcaaac ctgccataat cgcaaggctt accaagaagg
    41401 tcccagcgtt gaaaaaggca agattctggt aagacatata accgattaga atggcaccgc
    41461 tggatcgaaa gacaatcatc aagatgccac ccacggtgtt cttaaaggcc atagcagttt
    41521 cacggtcttc tgcctccaag acccgcaggc taagtggcat ataaagcccg ttttcatact
    41581 gaccagacaa gtcagatagg aaattgacca gacaaacaac tgctacaatc cagagggctg
    41641 gtgtaaatcc cattagcaaa ccaacgaggg catacagacc gacacgtgcg accaaggtag
    41701 ccagaatggt atccagttta tttttagtct tgtccgccca aatcccgata aagagaccag
    41761 ccaaaatcgg caaggtttca gatgcggtaa tcatagctaa ggcaaacttg gtatctggca
    41821 gcaacaagac atagttcatc aaagctaggt agtaaagcgt gtctccaaag ttggaaatca
    41881 catccgctag gtaactgaac aagaacattt tattacagat aatttttttc acaagcgatt
    41941 ttccttctag tagtcaaatt ttctatctat gcactagcta caatcttttc agtatttttt
    42001 cctgtaaaaa tgctataacc caagagtccc acagaaagca agaggaagat gagagaaata
    42061 cttgtcgcag aaagcaccgt caccataagg gcaaccaagg cttgacctgc taccatacca
    42121 atctggcaga aagcatcaat ccctccaccg actgtcgcca atttatcttc aggcagctca
    42181 tttaagacca aggcattcat tttcggattg aagacaccca aagtcatagc tgtcacaaaa
    42241 ataaccgtca ataccacata gatattgtgg aggaagaaac ctgagaaaat caagactggc
    42301 atcaatgtag agaatttgag gagattgatc aagctaacat ttttgaacaa agccataccg
    42361 atacttgacc ccaggatact accaactgag aagaaaatgg aaatcaaagc aacggttgtt
    42421 cctgcattga caatcacaaa gtctgagaac tccttcatat ttagaataac taatggtgaa
    42481 agtgctgtaa aaatggcatt caggctggca atggtcacaa ttgacgcttt gagaacagga
    42541 atattctgaa cagcttggta ggattctttg agactgttac gcataccctt gataagtcct
    42601 gcttctgttt ctgtttgctc agcttcttgg ataggatttt ccttcagtag cttggcaaga
    42661 gctggacgga gggttgccat gatggcaaga ctgaccaaga aggttcctgc attgaagaag
    42721 gcaagattct ggtaagacat ataaccgatt agaatggcac cgctggatcg aaagacaatc
    42781 atcaagatgc cgcccacggt gttcttaaag gccatagcag tttcacggtc ttctacctcc
    42841 aagacccgca ggctaagtgg catataaagc ccgttttcat actgaccagc caagtcagat
    42901 aggaaattga ccagacaaac aactgctaca atccagaggg ctggtgtaaa tcccattagc
    42961 aaaccaacga gggcatacag accgacacgt acgaccaagg tagccagaat ggtatccagt
    43021 ttatttttag tcttgtccgc ccaaatcccg ataaagagac cagccaaaat cggcaaggtt
    43081 tcagatgcgg taatcatagc cagggcaaac ttggtatctg gtaagagtaa aacatagttc
    43141 atcaaagcca gatagtaaag cgtatctcca aagttagaaa tcaagtccgc tacaaagcta
    43201 gatagaaata atttattgtg aatcaacttt ttcataaaca tctccttaaa catcaattaa
    43261 atatttgttt aatataattt tacactttat ttttataaag tcaacactta attttataaa
    43321 agttaaatat tttttaagca gttgtttaat ttattggttt tctatccatt cttgacaaaa
    43381 caagaacagt ctggtatagt attgttcggg cacctctttt gagaggtcgg agaaaaggct
    43441 ccctagtttt agggagctat ttttgttttt cccagagaaa attacacatt tggaggacta
    43501 tttgatgaag aaaatcgcat ttgattcaac taaatacttg aatttgcaac gtgaccatat
    43561 tttagaacga attgctcagt ttgaaggcaa gctctatatg gaatttggcg gaaaaatgct
    43621 ggaagatttc cacgcagccc gtgttttacc tggctatgaa ccagataata aaatcaaact
    43681 cctccaagag ttaaaagacc aagtagaaat cgtcatcgcc atcaatgcaa gcaacatcga
    43741 acattctaag gcacgcggcg acctaggcat ttcttacgac caagaagtct tccgcttgat
    43801 tgacaccttc aatgatattg atatttatgt tggttctgtg gtcattaccc aataccgcaa
    43861 ccaaccagcc gcagacgcct tccgcaaaca gttggaaaaa catggtatca agtcctatct
    43921 ccactatcca atcaagggtt atccttctga tatcgaccac atcatttcac cagaaggtat
    43981 gggcaaaaat gactacatcg aaactagtcg caatctcgtc gttgtcaccg cacctggacc
    44041 tggttcaggt aaattggcga cttgtatctc ccaactttac cacgaccaac tgcatggcgt
    44101 aacatcaggc tatgccaagt ttgaaacctt cccagtgtgg aacttaccgc tccaccatcc
    44161 cgttaacttg gcctatgaag cagcaactgc cgacctggac gacctcaaca tgatcgaccc
    44221 cttccacctg caaacttacg gcaaaactgc ggtcaactac aaccgtgaca tcgaggtctt
    44281 ccctgtcctc aaccgtacct ttgaacgtat tttgaacaaa tcaccatacg cctcaccgac
    44341 agacatgggc gttaacatgg tgggctattc catcgtggac gaagaggctg cgatcgaagc
    44401 atccaagcaa gaaatcatcc gccgctacta ccagaccttg gttgatttca aggcagagcg
    44461 ggtgagcgag caagcagtta agaagattga actcctcatg aatgaagtcg gtgtgacacc
    44521 agcagatcgt aaggttgtta tcgctgcgcg cgaaaaagca gagctgacaa ctagccctgc
    44581 ccttgctatt cagttgccaa ctggagagat tgtaacaggt aagacatccg acctcctcaa
    44641 gccaactgca actgttctcc tgaatgccat caagcaaatt gctaacatcg atgatgaaac
    44701 acttctcatc gaaccaaact acatccgtcc aattcaagaa ttgaaggcag attatctgga
    44761 taagaccaat acacgactcg atgcaagcga aattcttaac gcccttgcca tcactgcaca
    44821 agatagccct cttgctgcac gtgccatgaa agaattaggt caattaaatg gtagcgaagc
    44881 ccattcgact gttatcctat ccgatgaaga caagagtgtc cttcgtaaat taggcatcaa
    44941 tcttaccttt gaccctatct accaacacaa taagttttat caagctaaat aaccaaatcc
    45001 tgttctaatc tcattttgag gttagaactt ttttcgtgaa tgaatgattg cctgtatata
    45061 agaaaaagga cagctagaaa cctaactgtc ttattatttt attgaacgtc aaataccact
    45121 gacttcactt tagtcatcgc ttcgatacta taacggatac cttgaacacc tgctcctgaa
    45181 cccttaaccc ccaagaacgg gaagttgtct ggaccacgtt gggtcttggc attgatatga
    45241 accgtaccaa cttctaattt agaagcaaaa tcaaaagcaa atggatagtt gcttgtaaag
    45301 atagaagatt gaagaccata ttcagactgg ttacacaatt ccaacatctc atccaatgat
    45361 gaaacacgaa taattggaag aactggtcca aatggttctt cccaagcaat ttccatatct
    45421 ggtgtaacat ggtcaagaag ggttggccaa atcaagtttt tctcacgttt gtatggtgtc
    45481 aattcagttg caccttttgc ctgagcatct ctaaccagac cttcaataaa ttctgctgat
    45541 tgttcgtcaa taactggcgt aatgtccttg ttctcaaatg gatcaccgac agtcaatttc
    45601 tcaacttctg ctttcaactt cgcagccaat tcatcagcta cagaatccat aacaagaaca
    45661 cgcttaatag ccgtacaacg ttgacctgaa tagctgtagg caccacttac aatttctttt
    45721 gcagtgtggt ccaaatccgc atcttccaaa acaactgctg catccttacc acccaattca
    45781 agcataattg gacgaatgcc tgctaattta ccgacttttt gaccaattgg cgttgaaccc
    45841 gtaaagttaa tgaagtttac ttctggatgt tcgatgatgt agtcaccaat ttctgaacca
    45901 cgacctgtaa tggtattaaa gacacccgct gggattcctg catcggcaaa ggcttcagcc
    45961 aacaagagcc cagaaataga accctgtgtt ggtggtttaa acataaccac gtttcctccg
    46021 attagagccg gagcaatctt cgaagcagac aagtttacag ggtagttgta cggtgcaatt
    46081 gccaatacga tacctaccgg ttcacgacga accaaagaaa cctttgactt agcagttggc
    46141 tcgtaggttc caccctctaa tgatgaacca taaacacgca agccttcttc agcagcaaaa
    46201 cgaatgaggt gggcagaacg atctacttct ccgatggaag ccttgatccc tttcgaaact
    46261 tctttagcta aaatttcacc gattgcatct ttacgttctt ccaaaatatt tgctgcctta
    46321 tgcaaatatt gagcacgttc aaatgctgaa agggcacgcc aagcgggcaa tgcctttcta
    46381 gcagcatcca tcgccttatc aacttcttct tttgacatag caggtactgt acctagtttt
    46441 tcttgattaa tcggcgagtg aattgcgatt gatttttctg atccaaccca agaaccgtta
    46501 atataattat tatacgcctt cattttttcc tcctttgagt ataatgtgat tattgtaaca
    46561 tattgaacct ggtttagcaa taattttttg aaaatttcaa at
//
LOCUS       DBNFCX010000003        43969 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.003, whole genome shotgun sequence.
ACCESSION   DBNFCX010000003 DBNFCX010000000
VERSION     DBNFCX010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 43969)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 43969)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..43969
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.003"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(3..293)
                     /locus_tag="AC1PJC_000110"
     CDS             complement(3..293)
                     /locus_tag="AC1PJC_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000158581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5962 family protein"
                     /protein_id="HIP6619164.1"
                     /translation="MTNYYQLENMLVAGFKSEEELQRYQGLKAEYEEETLDYSFSIRE
                     IVNQLEIIIQSRENDFPNLEEGLLRDYQELVEYLREYDVSQAEKYTRRIYCG"
     gene            complement(307..1158)
                     /locus_tag="AC1PJC_000111"
     CDS             complement(307..1158)
                     /locus_tag="AC1PJC_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018368155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage replisome organizer N-terminal
                     domain-containing protein"
                     /protein_id="HIP6619165.1"
                     /translation="MSEVQWIKITTDIFDDEKIQLIESMPEGDTLIVIWFKLLVLAGK
                     QNYSGVLALGDKVFYTEEMLTTVFRRKSTTVKLALKTFEQFGMIAFVDGAVTIPKWEK
                     HQNIDGLEKIRKQTRERVARHRQKQKALVSGQDSLSIECNVTETLPVTESNSQVTQQI
                     KNKNQKENKNILDNSSRETEDQSTTYLKPEYYSLLQVIADRYNDRFIYPYNYTLTHKQ
                     KMAIGQFLSEGYMTSDEVLGMIDRIPNDVESPLAYLMSSMERLKDERLLEAKVIAHEN
                     ARRKYQN"
     gene            complement(1170..1454)
                     /locus_tag="AC1PJC_000112"
     CDS             complement(1170..1454)
                     /locus_tag="AC1PJC_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001287945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HIP6619166.1"
                     /translation="MSEEATLVVQLPKVLEKQLRAHYDEMVSTAIERALEDKELYKPM
                     VRMAALSRWLDVSTTTLQKWTREGMPTMVIDGVTLYDKRAVTRWLKQYER"
     gene            1601..2119
                     /locus_tag="AC1PJC_000113"
     CDS             1601..2119
                     /locus_tag="AC1PJC_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000181343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIP6619167.1"
                     /translation="MTNHIAKLIEESGKKLTEISSATNIAYPTLSGYNQGIRQPKKGN
                     AQKLADYFGVSMAYILGLDDNKQAPSTMNIISDSFKISEISSVTPFKSDMEKLKKGIE
                     LGEIHLSMPLNDGFSDDFRRILARYLVNNEEEFMKTFTKHMNSLKRESEIWQTWIQTE
                     EYRIRQEDRHKK"
     gene            2174..3328
                     /locus_tag="AC1PJC_000114"
     CDS             2174..3328
                     /locus_tag="AC1PJC_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018378871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HIP6619168.1"
                     /translation="MSVHKYQSTKGITYFVKVYLGLNDYGKKKYYTKRGFKTRKAAKA
                     HETAVNHQLNSGTFVHITAQTTYTYQELYQRWYEAYKDTVEATTAVKTADLYRLHILP
                     VFGEKKISKISPLDCQTFITDKAKTFKNMKQIKSYTSKIFEFAINMNYIERNPMSKVI
                     MPKLKKTGSENYWTVNELHHFLTIILENEPYKHYALFRLLAYSGLRKGELYALKWEDF
                     DSENQLLTVSKSLGRIDGHAIEKGTKNTFSVRSIYLDDETCSILNKWKQETSREKWQL
                     SVQPLSLDKEFMFTYCNRDGEIEPLHADYINNILKRIIRKHNLKKISPHGFRHTHATL
                     MIEMGIDPVNTAKRLGHASSQMTLDTYSHATKAGEKQSITKFAEYLNKAK"
     gene            complement(3472..3864)
                     /gene="rpsI"
                     /locus_tag="AC1PJC_000115"
     CDS             complement(3472..3864)
                     /gene="rpsI"
                     /locus_tag="AC1PJC_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HIP6619169.1"
                     /translation="MAQAQYTGTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADL
                     RLVINQPFAVTSTQGSYDVFVNVNGGGYGGQSGAIRHGIARALLQVDPDFRDSLKRAG
                     LLTRDARMVERKKPGLKKARKASQFSKR"
     gene            complement(3884..4330)
                     /gene="rplM"
                     /locus_tag="AC1PJC_000116"
     CDS             complement(3884..4330)
                     /gene="rplM"
                     /locus_tag="AC1PJC_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003083327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HIP6619170.1"
                     /translation="MNKTTFMAKPGQVERKWYVVDATDVPLGRLSAVVASVLRGKNKP
                     TFTPHTDTGDFVIVINAEKVKLTGKKATDKIYYTHSNHPGGLKSISAGELRSKNAVRL
                     IEKSVKGMLPHNTLGRAQGMKLKVFVGAEHTHAAQQPEVLDISGLI"
     gene            complement(4545..4706)
                     /locus_tag="AC1PJC_000117"
     CDS             complement(4545..4706)
                     /locus_tag="AC1PJC_000117"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619171.1"
                     /translation="MLIIKLFQQEALDGRDWWFTDSPSYTVDELVLEEFDKTFPYKEK
                     LVLPGQLGQ"
     gene            complement(4795..5658)
                     /locus_tag="AC1PJC_000118"
     CDS             complement(4795..5658)
                     /locus_tag="AC1PJC_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005504 - fatty acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HIP6619172.1"
                     /translation="MTFTIVTDSTSDLPISWVQENDVTVLGLTINLDGVTYETVGENR
                     LTSADLLAKMETGGLPTTSQVNVGQFEEVFEAAAKEGKEVLYLAFSSALSGTYQSGII
                     ARDMVLDNYPDAVIEIVDTKAAAIGEGYLVMQAAQARATGKSLAETKALIEDLVPRLR
                     TYLLVDDLNHLVRGGRLSKAAALIGGLVNIKPLLALNAEGKLEAIAKIRGRKKGIKEM
                     LNLTLDGLDHSTVMVAYTGDIEAAEGIKSSLLEDDRISDVLLTELGPVIATHTGTGVL
                     AILSIGTAMRA"
     gene            complement(5655..6176)
                     /locus_tag="AC1PJC_000119"
     CDS             complement(5655..6176)
                     /locus_tag="AC1PJC_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HIP6619173.1"
                     /translation="MKEKVLIVDGYNMIAFWQTTKQDFKKGDLDAARTTLLCTLSHYA
                     AFEQIEVICVFDAHHVPGLRQQYDEFKVSVIFTEEEETADSYIERLSAQLNSDRRKQV
                     SVATSDLNEQWVVFSQGALRVSARELEERTRVIKKDLDKFVDQVELYTPRLNPWSDGN
                     FQALKEMMEEMKE"
     gene            complement(6177..6905)
                     /gene="rlmB"
                     /locus_tag="AC1PJC_000120"
     CDS             complement(6177..6905)
                     /gene="rlmB"
                     /locus_tag="AC1PJC_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HIP6619174.1"
                     /translation="MEHNDIVYGVHAVVESLEANTGNKLYIQDDLRGKNVEKIKALAA
                     EKKVSISWTPKKTLSDMTEGAVHQGFVLRVSEFAYADLSVILEKAEQEDNPLILILDG
                     LTDPHNFGSILRTADATQVAGIIIPKHRAVGVTPVVAKTSTGAVAHVPIARVTNLSQT
                     LDKLKEAGFWVFGTDMNGTPSHKWNTAGKLALIIGNEGKGISSNIKKQVDEMITIPMK
                     GHVQSLNASVAAAVLMYEVFRKKI"
     gene            complement(6961..8178)
                     /locus_tag="AC1PJC_000121"
     CDS             complement(6961..8178)
                     /locus_tag="AC1PJC_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HIP6619175.1"
                     /translation="MDQWMRDFEEQQRHDELKRKMDAQTSAMNSQAIALQKQNNILQK
                     EHERQIEKEFKDRIFQLRLHLAQVTDESQRFVLQQMLSEAEEDYEDYQREQVEKRLAD
                     AKRRKIWLIISSVVAVLGMAGLYFVYQDISQVTVPELYGIELSEAKDLLYEEGLKVGT
                     ITEVGGQSVQPGMVSVSSPSSGKKVKRGSAVNLIIAKNVDAKDTTVVEDSSTSETATS
                     KTAGSSQASSQSQVGSAVQSFTVDIKKQGLVIRQEPSLSGEVVTNIEPGTYTIVETTQ
                     KEGHSWGRLKSGQGWISLTDLHNPVPQVDTKNLTTDQVKAWVMDDLFSRSVMIEKYRK
                     NQVVISVRMAEDGLVYADVTVPSDPNFEPRDWSYRINSRGELEASEYDTDPEQGGVNW
                     YVAQHYYLENSVN"
     gene            8365..8754
                     /locus_tag="AC1PJC_000122"
     CDS             8365..8754
                     /locus_tag="AC1PJC_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1761 domain-containing protein"
                     /protein_id="HIP6619176.1"
                     /translation="MTLILGIVAGLIAFAIGGLWYGLIFRDAWIEASGIDMAKVEADR
                     QAGKNGQKEMMISLAIEVLTAVVAIFFIKTLDVSPLHAAGGMGVIAVLASLKNYVFEQ
                     RPIKLILINESYKLVCYLVVGIIALFV"
     gene            8825..9805
                     /locus_tag="AC1PJC_000123"
     CDS             8825..9805
                     /locus_tag="AC1PJC_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic acid exporter family protein"
                     /protein_id="HIP6619177.1"
                     /translation="MSLSLRTIKLIFATVLAIYLATALGLSYATAAGIIAILSVLDTR
                     KSSFKMARNRLFSTLLALTIAVLTFALFGFGIWTLGIYLALYVPLAYRFNWEAGIAPS
                     TVLVTHLLLEQDISLIFLGNELALFLIGAGLALLFNLYMPSQEKKIEAYHDQVEDLLK
                     QILLRFEAFLLNGDGRNEAELITQLDKTLDEALKVVYLDRHNQLFQQTNYQVHYFEMR
                     AAQNKILRTMAGNINKCLLEGRENLILSSLFERAAQQLSRENSAKELLLDIELFHATF
                     RERPLPQTREEFETRATLFQLLHDMEAFIRLKVDFYEVYKDEDEGSEKGN"
     gene            9894..10481
                     /locus_tag="AC1PJC_000124"
                     /pseudo
     CDS             9894..10481
                     /locus_tag="AC1PJC_000124"
                     /inference="COORDINATES: protein motif:HMM:NF015553.6"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cadmium resistance transporter"
     gene            complement(10696..11826)
                     /locus_tag="AC1PJC_000125"
     CDS             complement(10696..11826)
                     /locus_tag="AC1PJC_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6619178.1"
                     /translation="MVQLNLKNIYKKYPNSEHYSVENFNLDIKDKEFIVFVGPSGCGK
                     STTLRMIAGLEDITEGEAYIDGVLMNDVAPKDRDIAMVFQNYALYPHMTVFDNMAFGL
                     KLRKYSKDEIKKRVEEAAQILGLTEFLQRKPADLSGGQRQRVAMGRAIVRDAKVFLMD
                     EPLSNLDAKLRVSMRTEIAKIHRRIGATTIYVTHDQTEAMTLADRIVIMSATKNEAGT
                     GTIGRIEQIGSPEELYNKPVNKFVASFIGSPAMNFFTVTLQEGVLVGDGFKVDLPEGR
                     RKHLEEKGYNGKSFTLGIRPEDIKASQLELDTYPSSIVEAEVVVSELLGAETMLYSKV
                     GNTEFVSRVDARDYHNPGDKVRLTFNLNKAHFFDDETDQAIV"
     gene            complement(12063..12923)
                     /locus_tag="AC1PJC_000126"
     CDS             complement(12063..12923)
                     /locus_tag="AC1PJC_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIP6619179.1"
                     /translation="MSKREELQHLFPKGRLVFEKTENGASVQLPLADHTWFSVDRKDL
                     TDREIELIDLLMNDSSAEQGHPWGRYFQGGGPLPQTLEKLQVIHAHVGHVSDEDGKVA
                     WLDMMAKLLPNLQGYYTGNGQDYLFILHQAPLFDVKEILRDTLATMEFDFGLRITLFL
                     GQIWPAKLVHSWPQLIEAEQSLFHHWRSSHHQSRLLTFGQLYLWAGQLHPVLREGLAS
                     LIAHQQLEKEIVALWQEGAVITKAAQSLYIHRNTLQYRLDKWFDWTGLQLKELTDLAV
                     CYMVIMDLSI"
     gene            complement(12936..14228)
                     /locus_tag="AC1PJC_000127"
     CDS             complement(12936..14228)
                     /locus_tag="AC1PJC_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HIP6619180.1"
                     /translation="MMHKMLVVDDEYMILEGMKHLLPYHEYNVEIVYTAENAEEALDY
                     FSQHTVDLVLTDVSMPDMTGLEMVRRMKEQSPDTHIIIMSGFQEFEYARKAISLGAMD
                     YLLKPINKQELAKLLQQLPTLKKETDREYTKGFLAGTLTASELLSHSQKTWFAARETP
                     NPMGYCREKNILHQVYYFQLTESRPEGSLYTEEVTPTMTIRQLIDKVERRLFYKQLSE
                     DLTATTTELYKDMEPLLRAGRLAKILDVLPHLADKLREATPAVYLTKQFFNQMMSDVF
                     YYFNEEDHQRLEDFYVKVEASRDLHQLLDYFSHYLKKFSESSTYSPHVQEVVTIVRER
                     FAEELSLKDMSAHLYLNTVYLGQLIKKETGHTFAELLNHQRIKVAQQLLLNSQLGIEE
                     ICFQVGYTNVGYFYKIFKRICGESPKNYRQKIGQLQTE"
     gene            complement(14218..15867)
                     /locus_tag="AC1PJC_000128"
     CDS             complement(14218..15867)
                     /locus_tag="AC1PJC_000128"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HIP6619181.1"
                     /translation="MKKVLIHTLLKSYSLLVIGIVIFFASILSYISWYQYDTNRIRIQ
                     QEVADGLKEELDYYQGRVGNYLADYITDRDRLDSLYHYFQLSPSQYQVWLLSHPHLMV
                     KRISLQDSVRTLYLYYPFVEGVDIAPMDANTVFVSTSDLKSGKKVTAENYKAPQHSIS
                     MTLFSPSTTEGIATIYVTIDADLLEQYIQRKTDLPMTVRVQDSLDREFYSLRPDVASP
                     PLSYRMSGDLQIAVGVDQQHAIEKVGSLVGIIFLGSSCLVALLLLVLRRVFKRYEVQV
                     LDIVDTMQQIRGADRHLRLQTDNKEQEMYLISSEINQMLDAMDQSIQDIYRLQLAQKD
                     ANMRALQAQINPHFLYNTLEFFRMYAVSKQMDELGDMIYEFSSLLRSSVTQAKMTTVA
                     EELSFCEKHSYICQIRYPRSIAYAYQMDPGCERVEIPRFVIQPLVENYFVHGVDLKRK
                     DNALSVKALKRGQDMEILIRDNGKGMDAETLEAYKHLLASRELSQENRSQSIGLRNVH
                     ERLLLYFGDRYQIELDSKEGEGVTYSILFEGVFPRGDEHDA"
     gene            complement(15864..16469)
                     /locus_tag="AC1PJC_000129"
     CDS             complement(15864..16469)
                     /locus_tag="AC1PJC_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF624 domain-containing protein"
                     /protein_id="HIP6619182.1"
                     /translation="MLGWLDRLFTLLFFLMKLSAIYLVLLLLGGVVLGISPANGTILY
                     LYDNYHMDASKYNFREAFGYFKEHFIRLNLGLGLVLLLLGLLFSGIWLLIQLPQTWWM
                     PAVLITNAFGLFYIFALYALFLKLQVHFEFSLKTGLQLAAVSLFLDWKALVKFLLGSL
                     VCGFLLFKLPLILFFFLPVLWLLFLYDAFDPVYKKVDKDYL"
     gene            complement(16747..18228)
                     /locus_tag="AC1PJC_000130"
     CDS             complement(16747..18228)
                     /locus_tag="AC1PJC_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIP6619183.1"
                     /translation="MKTWKKFAYSCVTLVSAAALAACGSLTGNKTASSSTTTEDGLTN
                     ILMYQIGDAPKNIDVLLENANKIIEKEAGAHLDIKYISWGDYKDKMAIITSSGEEYDI
                     AFADNYIINAQKGAYADLTELYKKEGKALYDIIDPAYIKGNTIDGKIYAVPVIGNVAS
                     QQMLSFNQDLVDKYGFDISKVDSYDDIEPMLATIKEKEADVTPLAWVKSSKPSTDGLE
                     YPAGNELPFAIDLKGDTTKVVNPFEVDRHIDNLRTIHNYYKAGYIMADAATTDATFSL
                     DVANWFVREETQGPADFGDSLLSTVAGYKITSKPITSAYKTSGSTQVANFVISKTSKN
                     KEKAMEVLTLINTNPELLNGLVFGPEGVNWEKDPSAENRIKLLDGYKGDTRMSAWNTG
                     NSQILYITDKVTDEDVKKAEELLAGAEESPLLGFNFNADAVKTEITSIQNIMSQYAAS
                     INTGTVDPDVAVPEMLKKLEAEESYKKVKEEMQKQYDEFLANK"
     gene            complement(18298..19221)
                     /locus_tag="AC1PJC_000131"
     CDS             complement(18298..19221)
                     /locus_tag="AC1PJC_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HIP6619184.1"
                     /translation="MKKKKQITSVSIHSFSKKTDLFFSSLLGIFALSCTLPFIFVIII
                     SMTDETSLAINGYSFWPEQWSLAGYEYLFQLKDQILQALFITFFVTIVGTSLNVFFTV
                     LYAYAISRNSFRYRRFFTLMALFTMLFSAGTIPTYIVMTSFLNLKDTVAALILPMLLS
                     PFNIMVMRSFFRKTISESIIESARIDGASEFRIFFQICLPLTLPGIATIALFTALAFW
                     NDWYNALLYIQSDNLFPLQYLLMKIQANIQYLSENAAAAAAMSSEVAGALPKEATRMA
                     IVVVSTLPIACLYPFFQRYFVKGLTIGGVKE"
     gene            complement(19231..20160)
                     /locus_tag="AC1PJC_000132"
     CDS             complement(19231..20160)
                     /locus_tag="AC1PJC_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIP6619185.1"
                     /translation="MKDLIKNLKQNAIFFLMVLPGVIWLILFFYIPVFGNVIAFKDYR
                     HTGNGFWDSLIQSKWIGLDNFKFLFQSSDAYIITRNTILYNLGFIVLGLIFAVGIAII
                     FSEMRSKKLVKIYQTTTLFPYFLSWVIISFFVYAFLSPDKGLINNILKGMGMDPINWY
                     STPTYWPFILLFLGIWKGLGYNSIIYYATIMGIDPTYYEAAIVDGATKWQRIRYVTLP
                     QLMPLMTILTILAVGNIFRADFGLFYQIPKNSGPLFNVTQVLDTYVYRGIAGTGDIGM
                     AIAAGLYQSVVGCILVVVTNLIVRRFDKESALF"
     gene            complement(20363..22243)
                     /locus_tag="AC1PJC_000133"
     CDS             complement(20363..22243)
                     /locus_tag="AC1PJC_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HIP6619186.1"
                     /translation="MLQINHSLQQSERVLEEICSSLGLDCQLELEVDGKEGLRIEGSA
                     DSYRIRAPKEHMIYRGLLVLASQLAQGETDIQILEKPAYRQLGFMEDCSRNAVLTVEA
                     SKILIRQLALMGYSHFQLYMEDTYQLRDEPYFGYFRGAYTKEELQAIEEECHHYGMEF
                     IPCIQTLAHLIAYLKWNISSIQAIRDVDNILLIGDERTYALIDKMFEALSHLKTRTIN
                     IGMDEAHLVGLGQYLNQHGYQKRSLIMCQHLERVLDIADKYGFHCSMWSDMFYQLLTA
                     SKDYTGQLEIDSEIQAYLDRLKDRVTLIYWDYYQTSRESYAQKLASHQQLGDQIAFAS
                     GAWKWIGFTPDNDFSMRIAPEAHAACQEYGVQEVTVTAWGDNGGECATFSILPSLHAW
                     AELQYRGNLGCLAEHFYQLHQVSLDDFLQLDLPNKTPSHPGPGHHGFNPSRYILYQDI
                     LCPLLQEHIDAEKDSAFYQELAPRLAEIGSRAKGYAYLFDTQAKLCQVLATKAAISVG
                     IRQAYQEGNRQVLAEQVDGLQQLRIDLESFYQALSYQWMVEKKVFGLDTVDIRLGGLD
                     ARILRAIQRLQAYLNNEVPKLDELEVPILPYDDFYQDKGFRATTANQWQIIATASTIY
                     TT"
     gene            complement(22256..23122)
                     /locus_tag="AC1PJC_000134"
     CDS             complement(22256..23122)
                     /locus_tag="AC1PJC_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HIP6619187.1"
                     /translation="MVVACFDIGGTGIKAALIGSDKQINHRQEWKTPSSLEELLVLMD
                     SVIQRVDGLEAISLSIPGAVDIETGVIQGLSAVPYIHGVSWYELLGQYGCPVYLENDA
                     NCVGLSELAVDDQLSTFACVVCGTGIGGALIVDRKLIRGKQGFGGEFGYMLIATGKGP
                     LKNWSQLASTGSLVRQVASQYEEAVEDWNGKRIFELAEQGDEVCQLAIEEMTRNLAYG
                     ILNISYFLEPEVLAIGGSISQNPVFIQAIQEQLEAIQKEYPEEFPYLPAIRACHYQQD
                     ANLMGAYMKTLQ"
     gene            complement(23103..25775)
                     /locus_tag="AC1PJC_000135"
     CDS             complement(23103..25775)
                     /locus_tag="AC1PJC_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HIP6619188.1"
                     /translation="MGKETVHIISHSHWDREWYLPLEEHRMRLVELFDDLFDLFETDP
                     EFRSFHLDGQTIVLDDYLEIRPQNRELLKKYIQDGRLIIGPFYILQDDYLITSEANMR
                     NTLLGHLESKKWGRAPKIGYYPDTFGNMGQAPQLLRQAGIDVALFGRGVKPVGFDNQV
                     LGDDQFQSTFSEMIWEGADGSQVLGILFANWYSNGNEIPVDEEEARVFWEKKLADVRK
                     YASTSHYLLMNGCDHQPVQKNLSQALRLARKLYPDIDFVHSSFEEYIAAVKEELPKDL
                     SRVKGELTSQETDGWYTLANTASSRIYLKQANDQASQLLEQVVEPLVVMTGDKVPRDE
                     LRYAWKLLLQNAPHDSICGCSVDQVHSEMETRFKKVKQVAHFLSQRSLDRWEKQVDSS
                     QLDGLLFTVFNTTACRQTQLVEVDLLVEQEDFRDGQLEQHFQSMAAISLPALGLFTSQ
                     GQELEATIEDLGVNFRYDLPKDAFRSANFARQIRVRFVVENQAPFSWQTYQVKPIVDT
                     RVSNSLSEHFENDYYRIDVVDGQLLLEDKRTGQAYKDWLRFEDCGDLGNEYIFMAPKN
                     NQLIYGQIEDFELVYQTEAVSIAKVIHRLRLPIAMETSLEDEQKRLVEFKHRTSQRSQ
                     EKKDLLLTTYLTLYRHQPQIRIQTNFHNQIKDHRLRAVFDIGIEAENHLADSIFEVVE
                     RPNQPHPAWENPSNPQRHRSFICLSDGRQAMTVSSKGLHEYEILDRGKIALTLLRATG
                     ELGDWGYFPTPEAQCLRECQLDYAFEICPVEECFASFQRAQAFQGNLLTKQLTSHSGH
                     LPCDHQFLSHPALEEDRLCVTSLKVAETSDRILLRYYNMSQEQLAGWSEWTEGVDLLE
                     EPLEDLPARIEPQAIRTEVIGYLEKEKEYGSSLF"
     gene            complement(25777..27063)
                     /locus_tag="AC1PJC_000136"
     CDS             complement(25777..27063)
                     /locus_tag="AC1PJC_000136"
                     /EC_number="3.2.1.163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004559 - alpha-mannosidase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 125 protein"
                     /protein_id="HIP6619189.1"
                     /translation="MFYTKEIIENWLTGIQKKTADHPSWGSVFERCYTDTLDRTISQL
                     EDGTTFVLTGDIPAMWLRDSTAQVKPYLALARKDEKLRQMILGLVERQMAFILMDPYA
                     NAFNQVANGRGHQTDHTQMGPWIWERKYEVDSLCYPLQLAYLLWKATGETSHFNQTFF
                     GAAEKIVQLWKLEQHHENSPYSFERDTDRLEDTLTHQGKGAPCTYTGMTWSGFRPSDD
                     ACIYPYLIPSNMFAVVVLGYLGEIAEQFASEEFSDLAEGARRLAQEIDQGIRTFGLTK
                     NQAGETIFAYEVDGLGNQSIMDDPNVPSLLAAPYLGYCQKDDPIYLATRRTILSQENP
                     YYYEGDYAAGLGSSHTFYRYIWPIALAIQGLTTDDKEEKARLLDTMVACDGGTGLMHE
                     SFHVDDPTLYSREWFSWANMMFCELVLDYYDIRPEE"
     gene            27307..29448
                     /locus_tag="AC1PJC_000137"
     CDS             27307..29448
                     /locus_tag="AC1PJC_000137"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GH92 family glycosyl hydrolase"
                     /protein_id="HIP6619190.1"
                     /translation="MYTSIVSTIDTRYGTYNSHAFSNGNTLPLTGVPFGMNYFAPQTS
                     DQTGNWWFNPYEPVYQGIRLTHQPSPWLGDFASLLLTPVTGELSRDSIFHRQSSYQLD
                     QAIFRPDLLQLQSNRFRLISRLAPSRYGASFEIASFANQPIGIVFYSSGKSIYRLLNP
                     HQLLIQIFQVSACQSPDFCMYALLEFEEEITECYHLVKDRKIAKTEVVGEDLHLRINF
                     SSTSIKGRLATSFISPEQAAFLLKDVPDFPQAQKQAEKTWNQLLGRIQIRDQKTEDIN
                     FFYHCLYRCLLYPQTFYEPSPDGQAIHFDPISNQAKLGKFFTNNGYWDTFRSSYPLLS
                     LIYPDYLEEFLHGILQHYRDTGFLPKWLSPDERGIMPGTLVDGVIADAACKGLVPDLM
                     EDFLQAMIETSQKTDADQRYGRHGSQIYRQLNYLPLDFNESVSHSLDYAYSDWAISQV
                     AEKLGQDQLAKQYAQMSLGYRQLFDSQTGLMRAKDRQKQFRADFSPLSWGRDYAECSV
                     LQATLSVFQDIDGLIELMGGKEAFTTYLIQLCNQEPYFSPEQYGYEIHEMSEMAQVNL
                     GQLAISNQPSFHIPYLFQWSTKPEYTSLLIHKIRQTAFKTGFQAYPGDEDNGSLSAWY
                     IFSCLGFYPVCPGKADYQIGLPHFKEVDLLLADQHKLTISTPKSDANFQFVKQVSLDK
                     QVVQTIKHDQLIKSNCLEFDLSILPSNEAYS"
     gene            complement(29488..33963)
                     /locus_tag="AC1PJC_000138"
     CDS             complement(29488..33963)
                     /locus_tag="AC1PJC_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0033925 - mannosyl-glycoprotein
                     endo-beta-N-acetylglucosaminidase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endo-beta-N-acetylglucosaminidase"
                     /protein_id="HIP6619191.1"
                     /translation="MTKCDFDKRQRFGIRKFTIGACSVLIGATLFGTQVSADQLENVD
                     SLSEPAVELSSVVNEHVEKTEAEEGILPISTDEKAVTEELNGEVSVSDSREEKLPSAP
                     SDNPENKLEDTEEAEDKEVDSSNSGLLLSDFPQVEDQGIRPKEIKFDNWDQVLAWEPG
                     ARPDDDLNRASVELVERFRGHVVNERANENAKVEALSNTNSKAKDHASVGGEEFKAYA
                     FDYWQYIDSMVFWEGLIPSPDVIDAGHRNGVPVLGTIFYNWSSSIEDQEKFVSSMRQD
                     PDGSFPVARKLVDMAKYYGFDGYFINQETTGSLVQPLGETMRNFMLYTKEYAESIGYP
                     ITYSWYDAMTYEYGRYHEDGLGEYNYPFMEKEGDKVPADRFFANFNWTRAKNNNSIEV
                     AKRIGRDPFDIFAGFELQRGGSYKTQINWDALFDENGKLKLSLGLFAPDTITSLGATG
                     EDYHENENIFFTGYQGDPTKQKPSDKNWYGLANLIADKTAITSSNFNSSFNTGHGKKW
                     FVDGKVAKDGEWNYRSVSGILPTWRWWIEASGEKLAAAYDFDDAYNGGNSLRFTGDLE
                     KDGKQEIKLYSTKIPLSETSRLRVAHKGGQGTNISLALALEPDYQFANKEAWRLLKLS
                     GDWQDQTFDLSSLAGKTVYGVQVVVENEAALSDFDFRLGQLAIYDQENSPTAPKDGQV
                     LAKRLKNAQDAEAVISFTGTDDADYYEVYAQVDGQWKLLTGSSNTRIYLPQLVRSAQA
                     EGRTQALKVHAVGKNGLRSEAGEFIFDWEMTVKDTSLPKPLAENIVLGAEVIGSSFAK
                     KEGGEGIEGMLNGTITSLSDKWSSHQLSGHVDIRLTQPRTVVRWAMDHAGAGGESVND
                     GLMNTKDFDLYYKNENGDWVLAKEVRGNRDHVTDIVLDKPIRAQEWRLDVLTSDNGTP
                     WKAIRIYNWRMYEELDMETPNIPMTHAVARHLGNHQIQVGFKDVPANRKIALYSSPDA
                     VKPLAELETTESGNLIFDPIRFESLPEFIYYRTLEEGKDWSNLLAIRVPQGEKVVKAM
                     EWIAPLEKKVYRQGSPLSLAGAQFRVVFEGDWPAERVNATNPAVTVRGFDPQKLGEQT
                     LTVSYLGETLAQPLMVYVVEDIAQGEKKAVGLEIQQLPKVQYVVGDDLDVTNGRFAII
                     YDDESTQSFSLTEAGVEIVGFDSRKEGRQSLGLRYAGLETSFDVLVSPKPIVNDEYLK
                     QKIAEIEALQTQTAYLYSSEQTQLALQTALEEAKSVVADTNRTVEQVEAAQTLLEKQL
                     GELDGEKLYQADLGRLNQLIQEVKGIDRPINSSELSSLLEKTEKILGSDSIRPDEMKE
                     LLSEWTDLFEQSSLVTHVGTRDSMESKNLLAPEKPRMDLTYELVPRQIITRTSTDLPL
                     GKERIVQEGADGQMMIAHLVYSDGRRELYSRIVADESQPKIVEVGSGLPIQQEKTLMV
                     ENSPQVEKQIRDASLQKSVLPQTGDTYQEKYVLLGLVGVALAGLSQLAKLRKQGE"
     gene            complement(34209..34607)
                     /locus_tag="AC1PJC_000139"
     CDS             complement(34209..34607)
                     /locus_tag="AC1PJC_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mini-ribonuclease 3"
                     /protein_id="HIP6619192.1"
                     /translation="MTKAVDVNLINGIALAFEGDAVYSMYVRRHLIFKGLTKPNKLHG
                     EANKYVSAKAQASLISALLEAQLLTEKEEEIYKRGRNTNSHTKAKNADVVTYRMSTGF
                     EAVLGYLHMTEQMERLDELVGWCIKFVENN"
     gene            complement(34600..35943)
                     /gene="cysS"
                     /locus_tag="AC1PJC_000140"
     CDS             complement(34600..35943)
                     /gene="cysS"
                     /locus_tag="AC1PJC_000140"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002916477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HIP6619193.1"
                     /translation="MIKIYDTMTRSLRDFVPLEEGKVKMYVCGPTVYNYIHIGNARSV
                     VAFDTIRRYFEYRGYDVTYISNFTDVDDKIIKAANEAGMTTKELSDKFIAAFQEDVAK
                     LGVKPATKNPRVIDYMDEIIDFVQVLIDKGYAYEAAGDVYFRVEKAENYARLANKTLS
                     DLEAGASGRVEGEGQLKEHPFDFALWKTAKPGEVSWESPWGVGRPGWHIECSVMATEI
                     LGATIDIHGGGADLEFPHHTNEIAQSECKTGQTFANYWMHNAMLNINDEKMSKSLGNF
                     LTAHDMLEQIDGQVLRFFLSTQHYRRPLNYTEKAISDAEINLKYLKNTYTQPVQNSVD
                     KSALELHLVAFEAAMDDDFNAANGITAIFDFAKWINSGNYDETVKEAFGKMLAVFGIV
                     FEEEVLDSEIEALIAERQAARANRDFATADRIRDELAAQGIKLLDTKDGVRWTRD"
     gene            complement(36237..36854)
                     /gene="cysE"
                     /locus_tag="AC1PJC_000141"
     CDS             complement(36237..36854)
                     /gene="cysE"
                     /locus_tag="AC1PJC_000141"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000539958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HIP6619194.1"
                     /translation="MGWWKDTIEIVKEKDPAARTTLEVLLTYPGVKALAAHRLSHWMW
                     KKGFKLLARMHSQFWRFWTNIEIHPGAEIASGVFIDHGAGLVIGETAIIESGVMLYHG
                     VTLGGTGKDTGKRHPTVRKGALVSAHAQVIGPVEIGENAKVGAAAVVLADVPADVTVV
                     GMPAKIVRVHGQKDEKVIHDMEDGREHYTTKLAELREASHHSSHL"
     gene            complement(36908..39127)
                     /gene="pnp"
                     /locus_tag="AC1PJC_000142"
     CDS             complement(36908..39127)
                     /gene="pnp"
                     /locus_tag="AC1PJC_000142"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HIP6619195.1"
                     /translation="MSKQVFETVFAGKKLVVETGQVAKQANGAVVVRYGDSTVLTAAV
                     MSKKMATGDFFPLQVNYEEKMYAAGKFPGGWMKREGRPSTDATLTARLIDRPIRPMFA
                     EGFRNEVQVINTVLSYDPDASAPMAAMFGSSLALAISDIPFNGPIAGVQVGYVNGELI
                     INPDKAQMEESLLDLTVAGNKDAINMVESGAKELSEDIMLEALLKGHAAIQELLDFQN
                     QIVAAVGKEKADVELLQVDPELQAEIVAAYNDDLKKAVQVEEKLAREDATNAVRETVI
                     AAYEEKYAEHEEFDRIMRDVHEILELMEHAEVRRLITEDKVRPDGRRVDEIRPLDAEV
                     DFLPNVHGSGLFTRGQTQALSVLTLAPMGETQIIDGLDDEYKKRFLHHYNFPQYSVGS
                     TGRYGAPGRREIGHGALGERALEQVLPSLEDFPYAIRLVAEVLESNGSSSQASITAGT
                     LALMAGGVPIKAPVAGIAMGLISDGTNYTVLTDIQGLEDHFGDMDFKVAGTRDGITAL
                     QMDIKIDGITPQILEEALAQAKKARFEILDVIEATIPEVRPDLAPTAPKIDTIKIDVD
                     KIKIVIGKGGETIDKIIAETGVKIDIDEDGLVAIFSPDRDAIERTKEIIAGLVREAKV
                     DEVFQAKVVRLEKFGAFVNLFDKTDALVHVSEMAWTRVNKPEDLVEIGDIVDVKVIKI
                     DDKGRIDASMKALLPKPEGYVEPEKRERSDKPRRPRDHKEKKDNNFGEFKFHKVEKK"
     gene            complement(39379..39714)
                     /locus_tag="AC1PJC_000143"
     CDS             complement(39379..39714)
                     /locus_tag="AC1PJC_000143"
                     /inference="COORDINATES: protein motif:HMM:TIGR02385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA];
                     GO_function: GO:0090729 - toxin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HIP6619196.1"
                     /translation="MDKYQVNLPLAIYEELAGIRSYISEELKSPDAADKKIQELIAGL
                     RSLEIFPERGFNVDERSKKGPLVPGHLTRGLPIKKDYIAIYNIDEAQKVVNVRYLVAS
                     KSDYMRLFK"
     gene            complement(39707..39994)
                     /locus_tag="AC1PJC_000144"
     CDS             complement(39707..39994)
                     /locus_tag="AC1PJC_000144"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619197.1"
                     /translation="MALTAEKKLINFQSEKSLVEEAKEVLASQNMTMTQALNLFLKNI
                     VVTGEIGLKSEEELEKERLFAELQAEVMKNVAEMNAGNYLSLDEMETKLFG"
     gene            complement(40313..40582)
                     /gene="rpsO"
                     /locus_tag="AC1PJC_000145"
     CDS             complement(40313..40582)
                     /gene="rpsO"
                     /locus_tag="AC1PJC_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001018251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HIP6619198.1"
                     /translation="MAISKEKKNEIMAQYARHEGDTGSVEVQVAVLTWEINHLNDHIK
                     QHKKDHATYRGLMKKIGRRRNLLAYLRRTDVNRYRELIHSLGLRR"
     gene            complement(40790..42067)
                     /locus_tag="AC1PJC_000146"
     CDS             complement(40790..42067)
                     /locus_tag="AC1PJC_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015851 - nucleobase transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease family protein"
                     /protein_id="HIP6619199.1"
                     /translation="MSTKANLLFDVHEKPAPLQGILLSFQHVFAMFGATILVPLILGM
                     PVSVALFASGVGTLIYQVATQFKVPVYLGSSFAYISAMALAIKEMGGDVSAAQTGILF
                     VGLIYVLIAALVKVIGTKWIDSLLPPIVIGPMIIVIGLGLANSAVTSAGFVADGDWKN
                     VVVAIATFLIAAFVNTKGKGFAKIVPFLIAIVGGYVIALCLGLVDFTPVLEAAWFELP
                     GFYLPFETGAFKLYNFYFGPEMIAILPIAVVTVAEHIGDHTVLSQICGRQFLKDPGLS
                     RTLIGDGVATAVSAFIGGPANTTYGENTGVIGMTRIASVSVIRNAALIAIAFSFLGKF
                     TALISTIPSAVLGGMSILLYGVIASNGLKVLIESRVDFGQVRNLIIASSMLVLGLGGA
                     VLNIGAITLSGTALSAIVGIILNLILPKAEKAE"
     gene            complement(42286..42759)
                     /locus_tag="AC1PJC_000147"
     CDS             complement(42286..42759)
                     /locus_tag="AC1PJC_000147"
                     /inference="COORDINATES: protein motif:HMM:NF042802.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6773 family protein"
                     /protein_id="HIP6619200.1"
                     /translation="MKKIVTDERVQQEENQVFAWVGRTMNILLPLSFLIKSLLLKWPF
                     DTYVFELIAMLVVSVYLFYGYWRKGLDMERGTTWQAYLYIGVVIAGTTIVMAWTNYQT
                     YGQHYTGIWDWHFGVVILIFFLSITGLIFLLANLLSWANKYRQKQVEKELVDELE"
     gene            complement(42740..42958)
                     /locus_tag="AC1PJC_000148"
     CDS             complement(42740..42958)
                     /locus_tag="AC1PJC_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HIP6619201.1"
                     /translation="MKNLRLKLARVEKDMTQGDLADAIGVTRQTIGLIEAGKYNPSLS
                     LCLSICHCLGKSLDQLFWEEPTDEKNCD"
     gene            complement(43112..43621)
                     /locus_tag="AC1PJC_000149"
     CDS             complement(43112..43621)
                     /locus_tag="AC1PJC_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619202.1"
                     /translation="MLKYIRALPLVIVAGAVVYFTIFICIDNGDWTYVVTRALGLKEE
                     HANNVSLIVIGAQSLFLTSDWFYKRIRAFLNRRLEKAKGLNRQIYLGYKAGIEFLMAL
                     PKRTILFTFYLLLVVAESVGLIEKAKDYAAVIIFIIAVDRVTKIWPEEKRRMIEFSQK
                     IKKRIKSVE"
BASE COUNT        12316 a        10372 c         8519 g        12762 t
ORIGIN      
        1 gttcaaccac aataaattct ccttgtgtat ttttctgcct gagacacatc gtattccctc
       61 aaatattcta caagttcctg ataatctcgc aacagccctt cttctaaatt tgggaaatca
      121 ttttctctac tctggataat aatttctaat tgattgacaa tttctctaat tgagaaacta
      181 taatccaggg tttcttcctc atactctgct tttaaccctt gataccgttg taactcttct
      241 tctgatttaa aaccagccac cagcatattc tcaagttgat aataatttgt catctttttc
      301 tccctattag ttttgatatt ttcttctagc attttcatga gcaattacct tagcttccaa
      361 taatcgctca tcttttaggc gctccataga gctcattaaa taggctaatg gtgactctac
      421 atcattagga atacgatcta tcattcccaa gacttcatca gaagtcatat agccttcgct
      481 taaaaactgt ccaatcgcca ttttttgctt atgcgttagg gtgtaattat aggggtaaat
      541 aaaacgatcg ttatatctat ccgcaatcac ttgcaaaagg gaataatact ctggtttgag
      601 ataagttgtt gactgatctt ctgtctctct agaactatta tctagtatat tcttattctc
      661 tttctgattc ttgttcttaa tctgttgagt tacttgactg ttactttccg ttacaggtaa
      721 cgtttctgta acgttacatt ctattgataa actatcttgc ccacttacta gagctttttg
      781 cttttgacga tgacgagcca ctctttctct tgtttgttta cgaatttttt ctagaccatc
      841 aatattctga tgtttctccc atttaggaat tgtgactgct ccgtccacaa aagcaatcat
      901 tccaaattgt tcaaatgttt tcagagccag cttcacagtc gttgactttc tcctaaagac
      961 tgtagttaac atctcttctg tataaaagac cttatctcct agagctaaga ctccactgta
     1021 attctgttta cctgctaaaa cgagtagttt aaaccagatg acaattaaag tatctccttc
     1081 gggcattgac tcaatcaact gtattttttc atcatcaaag atatctgtag taatcttaat
     1141 ccattgtact tcactcatac gtgtacctcc tatctttcat attgctttag ccatctagtg
     1201 accgctcgtt tatcgtacag agtcacacca tcaatgacca ttgtaggcat tccttctcgt
     1261 gtccattttt gaagggttgt cgttgataca tcaagccacc tagaaagggc tgccatccga
     1321 accataggtt tatatagctc tttatcctct agcgctcttt caatagctgt agagaccatt
     1381 tcatcataat gtgcccttaa ctgtttttcc aaaactttgg gaagttgaac aactaaagtc
     1441 gcttcttcag acatattatt acctcgtttc cgtttctcaa ttaaataaac tccgaattta
     1501 tttgttattc attttgaatt atatattctt ttagaatttt tgtcaactat ttttattcaa
     1561 aaagaattaa atgtgttata atactctcaa ggaggtattt atgaccaatc atattgcaaa
     1621 actgatagaa gagagcggca aaaaactgac tgagattagt tctgctacaa atatcgctta
     1681 tccaacctta tcaggataca atcaaggcat tcgtcaaccg aaaaaaggaa atgctcaaaa
     1741 attagctgac tatttcggcg tatccatggc ttacatctta ggacttgatg ataacaaaca
     1801 agcaccatca actatgaaca ttatttcgga cagttttaaa atttccgaga ttagttctgt
     1861 aacacctttt aaaagcgata tggaaaagct gaagaaagga attgaactag gagaaatcca
     1921 tctgtctatg cccttaaatg acggcttctc agacgatttt aggcgcattt tagctcgcta
     1981 tttggttaat aatgaagaag aattcatgaa aaccttcact aaacacatga atagtttaaa
     2041 acgagaatca gaaatttggc aaacctggat tcagaccgaa gaataccgaa ttagacaaga
     2101 agaccgacat aaaaaataaa ctaacagttt ctcaattaca taagctccga aaacttagaa
     2161 acggagaact gttatgtctg tacacaagta ccaatctaca aaaggaatca cctattttgt
     2221 taaagtttac cttggtctaa acgactacgg taagaaaaaa tattatacta aacgagggtt
     2281 caagacgcgt aaagctgcca aagctcatga aactgctgtt aatcatcagt tgaatagtgg
     2341 aacttttgtc catattactg ctcaaacaac ctacacttac caagagcttt atcaaaggtg
     2401 gtatgaagct tataaagata ctgttgaagc aactactgca gtcaaaactg ccgacctcta
     2461 tcgcctacat attcttcctg tttttggaga aaagaaaatt tcaaaaatca gtcctttaga
     2521 ctgtcaaacc ttcatcactg acaaagccaa gacattcaaa aacatgaagc aaatcaaatc
     2581 ttatacttct aaaatatttg aatttgccat taatatgaat tatattgaac gaaatcccat
     2641 gagcaaggtt attatgccta aactcaaaaa aactggcagt gagaactatt ggacagttaa
     2701 cgagttgcat cattttttga caatcatttt agaaaatgaa ccttataaac attatgcact
     2761 atttcgatta ctagcataca gtgggttacg aaaaggagag ctctacgccc ttaaatggga
     2821 agattttgat tctgagaatc aactattaac agtcagcaaa agtttaggaa gaatagatgg
     2881 tcatgccatt gaaaaaggaa ctaaaaatac attctctgta cgctctatat atcttgatga
     2941 tgaaacctgt tctatcctca acaaatggaa acaggaaact agcagagaaa agtggcaatt
     3001 atcagtacaa cctctttctc tcgacaaaga atttatgttt acatactgca accgagatgg
     3061 tgagatagaa cccttacacg ctgactatat caacaatatt ctaaaacgta ttatacgtaa
     3121 gcataatctt aaaaagatta gcccacatgg gtttagacac actcacgcaa ccttgatgat
     3181 tgaaatggga attgacccag tcaatactgc taaacgctta ggccatgcaa gcagccagat
     3241 gactttagac acttatagcc atgctacaaa agctggtgaa aaacagtcaa ttacaaaatt
     3301 tgcagagtat cttaataagg ctaaatgaac tagatttatt gctcagcctc atattgacca
     3361 aaaaccaagt ctcgaaagat taccaaaagg attaccaaag cacatttttc atcaaaaaag
     3421 caccttgcga aaacttcgca aagtgctctg aaacgttgat ataactgaat attaacgttt
     3481 tgagaattgt gatgccttgc gggctttttt gagacctggt ttcttacgtt caaccatacg
     3541 agcgtcacgt gtaagaaggc ctgcgcgttt caatgaatcg cggaagtctg ggtctacttg
     3601 aagcaatgca cgcgcgatac cgtgacggat cgcacctgat tgaccaccgt aaccaccacc
     3661 gtttacgtta acgaaaacgt cgtatgaacc ttgtgttgaa gttactgcga atggttggtt
     3721 gataaccaaa cgaaggtcag cgtgtgggat gtactcttct acatcttttt tgtttactgt
     3781 gattttacca gtacctggga ccaaacgtac gcgtgcaacc gcgtttttac gacgaccagt
     3841 acctgtgtat tgtgcttgtg ccatttagat tacgtccttt cccttagata agacctgaaa
     3901 tatcaagtac ttctggttgt tgtgcagcgt gagtgtgctc agcacctaca aacactttca
     3961 acttcatgcc ttgtgcacga ccaagtgtgt tgtgtggaag cataccttta actgattttt
     4021 caatcaaacg aacagcgttt ttagaacgca attcaccagc tgagattgat ttcaatccgc
     4081 ctgggtggtt tgagtgagtg tagtagatct tatcagttgc ttttttacca gtcaatttca
     4141 ctttctcagc gttgattacg ataacgaagt caccagtatc agtgtgaggt gtgaaagttg
     4201 gtttgttttt accgcgaaga acgctagcaa ctactgctga aaggcgtcca agaggtacat
     4261 cagtagcgtc tactacatac catttacgtt caacttggcc tggtttagcc ataaatgttg
     4321 ttttgttcat gatttctcct atacgaatcg tttttgttta ctgggcggat gttccggtcc
     4381 gcgggtattt ggaaggttcc ggggcctttc aaatggggta aacaataccg tctaccattt
     4441 tatcaaatct actagtctcc gtcaagctat tttactttac tttttttatt ttttgaaaga
     4501 tagcagagct gctgagaatg aaagccttat ccattttaaa tttcttactg ccctagttgt
     4561 ccaggcaaga ccagcttctc cttataagga aaggttttat caaattcttc caagaccaat
     4621 tcatccaccg tgtagctcgg cgaatctgta aaccaccagt cccggccatc caaagcttct
     4681 tgttggaaca acttgataat gagcattatc gtatctcctt tttattaccc tatgctacat
     4741 aagtcgtcat cgcacaaaaa gggacacatc tttacaagaa atatccctta gaatctaggc
     4801 tctcattgct gtcccaattg ataaaatagc taagactcct gtccctgtat gagtggcaat
     4861 cacaggccct aattccgtca atagaacatc agaaatacgg tcgtcttcca ataaactaga
     4921 tttgatgccc tctgccgcct caatatcacc tgtataggcc accatgaccg tagaatgatc
     4981 caaaccgtcc aaggtcaggt tcaacatttc cttgattcct tttttgcgac cacggatttt
     5041 ggcaatggct tctaacttcc cttccgcatt gagtgcaagg agaggtttga tattgactag
     5101 accgccaatg agggcagctg ccttggacaa gcgaccacca cgcaccaggt ggttgaggtc
     5161 atcaaccaag agataggtcc gtaggcgtgg gaccaagtcc tcgatgagcg ccttggtttc
     5221 agctaatgac ttacccgttg cacgcgcttg agctgcttgc ataaccaagt acccttcacc
     5281 aatagccgcc gccttagtat ctacaatttc gataacagca tcaggataat tgtccaagac
     5341 catatcgcgt gcaataattc cactctgata ggtccctgaa agagccgatg aaaaggctag
     5401 gtaaagcacc tctttgcctt ccttagctgc tgcttcaaag acttcctcaa actgaccaac
     5461 attaacctga ctagttgtcg gaagaccacc tgtttccatc tttgcaagca aatctgcaga
     5521 ggtcaagcgg ttttcaccga ctgtttcata ggtcacacca tctaggttaa tggtcaaacc
     5581 aagcacagtc acatcgtttt cttggaccca gctgattggc aaatccgatg tcgaatcggt
     5641 tacgattgta aatgtcactc tttcatttcc tccatcattt cttttaaggc ttgaaaattc
     5701 ccatctgacc agggattgag ccgtggggtg tagagttcta cctggtccac aaacttgtcc
     5761 aagtcctttt tgatgaccct ggttctctcc tctaactcac gcgctgaaac ccgtaaggca
     5821 ccttgtgaaa agaccaccca ttgttcattg aggtcgctgg ttgcgacgga aacctgcttg
     5881 cgacggtcac tattgagctg ggcgctgagc cgttcgatat aactatctgc cgtctcttcc
     5941 tcctctgtaa aaatgaccga taccttgaat tcatcatact gctggcgaag acctggcaca
     6001 tggtgggcat caaagacaca aatcacctca atctgttcaa aggctgcgta atgagacaag
     6061 gtgcaaagca aggtcgttct ggccgcatcc aagtctccct ttttaaaatc ttgcttagtg
     6121 gtctgccaaa aagcaatcat gttgtagcca tctacaatga gaactttttc tttcatttag
     6181 attttcttcc gaaatacttc atacatcagc acagccgcag ctacactggc attgagggat
     6241 tggacatggc ccttcatagg aatggtaatc atctcatcca cctgcttttt gatattgctg
     6301 gagataccct tgccttcgtt gccgataatg agagctagct tgccagccgt attccacttg
     6361 tggcttgggg ttccgttcat atcggtacca aatacccaga aaccagcctc cttgagtttg
     6421 tcgagggttt ggctaagatt ggtcactcgg gcgattggga catgggccac cgcacctgtg
     6481 gaggtcttag ccacaacggg cgtcacgcca actgctcggt gtttgggaat gatgatgcct
     6541 gccacctgag tggcatctgc ggtccgcaaa atcgatccga agttgtgggg gtctgtcaga
     6601 ccgtccaaga tgagaatgag gggattatct tcctgctctg ccttttccaa aatcaccgac
     6661 aggtccgcat aggcgaactc agagacccgc aggacaaaac cttggtgaac ggcaccttct
     6721 gtcatgtcag acagggtctt cttgggcgtc caagaaatcg acaccttctt ctctgccgct
     6781 agggccttga ttttttctac attttttccg cgcaaatcat cctggatgta gagtttgttg
     6841 ccggtgttgg cctccaaact ctccactaca gcatgtacgc catatacaat atcattatgt
     6901 tccataagag tattatagca tattttggaa aaggaaaaag ccgagaattt ctcagctttc
     6961 ttagttcaca ctgttttcca gataataatg ttgggcaaca taccagttga cacccccttg
     7021 ttccggatct gtatcatact cactggcttc caactcccca cgactattga tccgataact
     7081 ccaatcgcgt ggctcaaaat tagggtctga tggtaccgtt acatctgcat atactagacc
     7141 atcttcagcc atacggacac taatgacaac ctgatttttc cgatactttt caatcatgac
     7201 actgcgacta aacaaatcat ccatgaccca agcttttacc tgatctgttg ttaagttttt
     7261 ggtgtcaacc tgcggtacag gattatgcaa atctgtcaac gaaatccagc cctgtcctga
     7321 cttcaacctt ccccaactat gtccttcctt ttgagtcgtc tcaactatcg tgtacgttcc
     7381 aggttctata ttggtcacaa cttctccaga taaactaggt tcctgacgaa taaccagtcc
     7441 ttgtttttta atatccacag taaacgattg aacggcgcta cctacctgag actggctaga
     7501 agcttgcgaa cttccagcag tcttactagt tgctgtctca ctagtcgagc tatcctcaac
     7561 tacggtagta tcctttgcat ctacattttt agcaataatt aagttaaccg cacttccccg
     7621 ctttaccttc ttcccactac ttggagaaga tacactaacc atcccaggct gaactgactg
     7681 tccaccaact tctgttattg taccaacttt taacccctct tcatacagta aatccttagc
     7741 ttcagacagc tcaataccat ataattcagg aactgtaact tgagaaatat cttggtagac
     7801 aaaatataaa ccagccattc ctaacacagc cacaacactt gaaatgataa gccatatctt
     7861 tcgtcttttt gcgtctgcca aacgtttctc aacttgctct ctttgataat cctcataatc
     7921 ttcctcagct tcgctgagca tttgctggag tacaaatcgt tgactctcat ccgtaacctg
     7981 tgctaagtgc aatcgtaatt gaaaaattct gtccttaaac tctttttcaa tttgacgctc
     8041 atgctctttt tgcaaaatgt tattttgttt ttgaagtgct attgcctgag agttcatggc
     8101 agaggtttga gcatccattt ttcgtttcaa ctcatcatgt ctctgctgct cttcaaaatc
     8161 ccgcatccat tgatccataa caatcatctc ctcataaaat attggttgat atctataaat
     8221 gaaatctatt ttattttagt ataacataac acctaaattt gtcaattctc attttcaccc
     8281 cgtttcaatc taacttttga caaatagtaa agcctatgat attctaatgt ctattatttg
     8341 tccgtacaag tataaggaga acgtatgaca cttattttgg gaattgttgc agggctgatt
     8401 gcctttgcta ttggtggttt gtggtatggt ttgattttcc gtgatgcttg gattgaagcc
     8461 tctggcattg acatggccaa ggtagaagct gaccgtcagg ctgggaaaaa tggccaaaag
     8521 gaaatgatga tttccttagc gattgaagtt ttgactgctg ttgtggcgat tttcttcatc
     8581 aagacccttg atgtttcacc actccacgca gctggcggca tgggcgtgat tgcagtgctt
     8641 gcttcattga aaaactatgt ctttgagcaa cgccctatta aactcatcct catcaacgaa
     8701 agctacaaac tggtctgcta cttggtagtc ggaatcattg ccttgtttgt ataaagtcaa
     8761 ccctcctaac cttaggaggg ttttatggta caataaaagg aagactaaga ctaaaggagc
     8821 ccccatgtcc ctctccctcc gaacgattaa actgatattt gccaccgttc tggccattta
     8881 cctagcgacc gccctgggtt tgtcctatgc gacggcagct ggcatcatcg ccattctcag
     8941 cgtcctcgac acccgcaagt ccagcttcaa aatggcccgc aaccgcctct tttccaccct
     9001 cctggccctg accatagccg tcctgacctt cgccctcttt ggctttggca tctggaccct
     9061 aggcatttac ctggcactct acgtccctct agcctacaga ttcaactggg aggctggcat
     9121 cgccccctcg accgtcctcg tcacccacct cttgctagag caagatattt cgctgatttt
     9181 tttgggaaat gagctggcgc tttttctgat tggggcagga ctggcactct tgtttaacct
     9241 ctatatgccc tcgcaagaaa agaaaatcga ggcctaccac gaccaagtcg aagacctgct
     9301 caagcagatt ctcctccgct ttgaagcctt tctgctaaat ggcgacggac gaaacgaggc
     9361 agaattgatt acgcagctgg ataagacctt ggatgaggcc ctcaaagtcg tctatctaga
     9421 ccgccacaac cagctcttcc aacagaccaa ctaccaggtc cattactttg aaatgcgagc
     9481 tgcacaaaac aaaatcctgc ggaccatggc aggaaacatc aacaagtgtt tactggaagg
     9541 cagagaaaat ctcatcctgt ccagcctatt cgagcgagca gcccagcaac taagcagaga
     9601 aaactccgcc aaggaactgc tcctggacat cgaactcttc catgccacct tccgcgagcg
     9661 acctctgcca caaacccgag aagaatttga aacccgtgcc accctcttcc aactcctaca
     9721 cgacatggag gcctttattc gcctcaaggt tgacttttat gaggtttata aagatgaaga
     9781 tgagggtagt gaaaaaggaa attaaaatga atcgcaattt ttacttctat ctttcaaaat
     9841 tgatgtgcct ctgtaaataa atatctatga ctactatatt atacggaggg accatgacta
     9901 ttattactta tgcattgatt cttggtattt caacaagtat cgattatttc ctaattttat
     9961 tccttttatt ttcacaggca aagaaaccag gtgaaagacg cacaatctat tttggacaac
    10021 tacttgctag ttttatactc attctcttaa gttcaatcct tagccaagtt gccaatattt
    10081 ttctagctga ctggatcctt ggtctgctcg gcttcgtccc tattctacta ggggttagaa
    10141 tcctttttga aaacgaagca gaaacagaga ttcctgatag caaaatcgga ctactatcta
    10201 tcatttttat ttcatgagca tcgggagtag ataatttagg aatattcaca ccctatttta
    10261 caactttaag taccttagaa acgctcttaa ctgctggcct gatcttgcta gagacagtcg
    10321 ccatttgcta cctagcagaa aaatttggga gtctccatag catttctgaa ttcatagaaa
    10381 aatatgaaaa aatgattctt ccaaccattt ttatcatttt aggaatctac attttattcg
    10441 aattcggaac aatgacctac ctactgcaat tactaacata agaaaaagaa ccgtcagttt
    10501 aaaccgacgg ttcttctatt ttcccatgaa attcatccaa tacttggtta tgcaaatgca
    10561 cgaaagatat acccatcatg accgtattcc ctgcgactgc aatgataaat tcctcctttg
    10621 cggacacctt ccctagccaa aaaccgccag attttcatct gacggtcagg tgttttatga
    10681 acaaattata aaagattaaa caatggcttg atctgtttca tcatcaaaga aatgagcttt
    10741 gttgaggttg aaggtcaagc gcaccttgtc tcctggattg tggtaatcac gcgcatctac
    10801 acgagataca aattctgtat ttcctacttt agagtagagc atggtttccg caccaagaag
    10861 ctctgaaacg acaacttctg cttccacgat agaagatgga taagtgtcca actccaattg
    10921 tgaagcctta atgtcttctg gacggatacc caatgtaaat gatttgccat tgtagccttt
    10981 ttcttccaaa tgcttgcgac gaccttctgg aagatctact ttgaaaccat ctccaacaag
    11041 cacaccctct tgaagagtca ctgtaaagaa gttcattgca ggactaccga tgaagctggc
    11101 aacaaatttg tttacaggtt tattgtaaag ctcttctggg ctaccaattt gttcgatacg
    11161 accgattgta cctgtacctg cttcattctt agtcgcagac ataataacaa tacggtcagc
    11221 caaggtcatg gcttctgttt ggtcatgcgt tacgtagatc gttgttgcac caatacgacg
    11281 gtggatttta gcaatctctg tacgcatgga tacacgcaat ttggcatcca agtttgacaa
    11341 aggctcatcc ataaggaaga cttttgcatc acggacaatg gcacggccca tggcaacacg
    11401 ttggcgttga ccaccagaaa ggtcagcagg tttacgttgc aagaattctg tcaaaccaag
    11461 aatttgtgca gcttcttcta cacgtttttt gatttcatcc ttgctgtatt tacgcaattt
    11521 caaaccgaaa gccatgttgt caaatacagt catgtgtggg taaagggcat agttctggaa
    11581 taccatggca atatcacggt cttttggtgc cacatcgttc atcaacacgc cgtcgatgta
    11641 agcttcacct tctgtaatat cttccaatcc agcaatcata cgaagagtag ttgatttacc
    11701 gcatcctgaa ggtcctacga aaacaataaa ctctttatct ttaatatcta gattaaagtt
    11761 ttcaacggaa taatgctcgc tatttggata ttttttataa atatttttta aattaagttg
    11821 aaccatgttc aagcctcact ttctttgata gttttattgt aaatgaaagc gttttatttt
    11881 tctaggtcaa ggtgaacaaa aagaacacaa tcttttgtac aagttgcaca aaagactgtg
    11941 ttactgaaat agtttacttt tcaaaaattc aatgagccct ttgggatttt caagagaaaa
    12001 agggacgaag cgatgggcgg cattctcaaa ggctacaacg cttttctcat cattagctcc
    12061 tattagatac ttaaatccat gataaccatg tagcaaactg ccaaatccgt caattccttg
    12121 agctgtaatc ccgtccaatc aaaccatttg tccaagcgat actgcaacgt gtttcgatgg
    12181 atatagagag actgggctgc cttggttatg accgcacctt cttgccaaag agctacaatt
    12241 tccttttcta gctgctggtg ggcaatcaaa ctagcaagcc cttctctcaa aacggggtgg
    12301 agttgacctg cccaaagata gagctgaccg aaggtaagca accgtgattg atggtggctg
    12361 cttcgccaat ggtgaaaaag ggattgttca gcttcgatta attgtggcca agagtgtacc
    12421 aatttggctg gccagatttg ccccaaaaac aatgtgattc tcagaccaaa atcgaactcc
    12481 atggtagcaa gggtgtcacg cagtatttct ttgacatcaa aaagaggtgc ctgatgtaga
    12541 atgaataggt aatcctgtcc attgcctgta tagtagcctt ggagattggg gaggagtttg
    12601 gccatcatat caagccaggc tacctttcca tcttcatcgg atacatggcc tacatgagca
    12661 tgaataacct gtagcttttc caaggtttgt ggaagaggac ctcccccttg gaaatagcgt
    12721 ccccaaggat gaccttgttc tgcgctcgag tcattcatca gcaagtcaat cagttcgatt
    12781 tctcgatctg tcaaatcctt gcgatcgacg gaaaaccaag tatgatcagc cagaggcaac
    12841 tggacacttg ctccgttttc tgtcttttca aatacaagcc ttccttttgg aaataggtgc
    12901 tgcaattctt cccttttgct catctcgcct ccatctcatt ctgtctgtaa ttgaccgatt
    12961 ttctgtcggt aatttttggg agattcccca caaatgcgtt taaaaatctt atagaagtaa
    13021 ccgacatttg tatatccaac ttgaaaacaa atttcttcga ttcccaactg actgttcaaa
    13081 agaagctgtt gtgctacctt gattcgctgg tgattgagca gttctgcaaa agtatgcccg
    13141 gtctcttttt tgataagttg acctaggtaa accgtattta ggtagagatg agcactcata
    13201 tctttcaaag acagttcctc tgcaaagcgt tcacgaacaa tcgtaacaac ttcctgtaca
    13261 tgtggactgt aagtggaact ctcggaaaat tttttcagat aatgactaaa ataatccaat
    13321 aattgatgta aatctcgact tgcttctacc tttacataga aatcttccaa gcgctgatgg
    13381 tcttcttcat taaaatagta aaacacatcc gacatcatct gattaaaaaa ttgttttgtt
    13441 aggtagaccg ccggagtggc ttctcgtaat ttatcagcca aatgtggtaa aacatcaagg
    13501 atttttgcca atcttcctgc acgtagaagc ggttccatat ctttatagag ctctgtggta
    13561 gtagccgtta gatcttctga tagttgctta taaaataagc gcctctctac cttgtcaatc
    13621 aactgccgta tggtcatcgt cggggtaact tcttctgtat atagactacc ctctggccga
    13681 ctttctgtca actgaaaata gtagacttga tgcaaaatat ttttttcacg acagtagccc
    13741 attgggtttg gagtctctct agcggcaaac catgttttct gggagtgact taataactcg
    13801 ctcgctgtca gggttcctgc caagaagccc ttggtatatt ccctatctgt ctctttcttc
    13861 aacgttggta gctgttggag cagcttagcc agttcttgtt tattgatggg cttaaggaga
    13921 taatccattg ccccgaggga gatggcctta cgggcatatt cgaattcttg aaagcctgac
    13981 atgatgataa tgtgggtatc aggcgattgt tctttcattc gtcgaaccat ttctaggcct
    14041 gtcatatctg gcatgctgac atcggttaga acaaggtcca cagtatgctg tgaaaaataa
    14101 tccagcgctt cttcggcgtt ctctgccgta taaacaatct cgacattgta ttcatgataa
    14161 gggagaagat gcttcatccc ttccaaaatc atatattcgt catcaactac taacatctta
    14221 tgcatcatgc tcatctcctc gggggaagac accttcaaat aagattgaat aggtcacccc
    14281 ttccccttct ttagaatcta attctatctg gtaacggtct ccaaaataga gaagtaaccg
    14341 ctcgtgaacg tttcgtaatc cgattgattg tgaccgattt tcttgcgaca gttctcgact
    14401 tgccaagagg tgtttgtagg cttctagggt ttctgcgtcc attcccttac cattatctct
    14461 gatgagaatt tccatatcct gtccacgctt gagagctttg acactaagcg cattgtcttt
    14521 tcgtttgagg tctactccat ggacaaaata attttctaca agaggctgga tgacaaaacg
    14581 aggaatttca actctttcgc acccaggatc catttgatag gcataggcaa tggaacgagg
    14641 atagcggatt tgacaaatgt agctatgttt ttcgcaaaat gaaagttctt ctgccaccgt
    14701 tgtcattttt gcctgtgtca cactactgcg aagcaagctt gaaaattcat aaatcatatc
    14761 ccctagctca tccatctgct tgctgactgc atacatacgg aaaaattcca aggtattgta
    14821 gagaaaatgg gggttaattt gggcttgtaa ggctcgcata ttggcatctt tctgagctaa
    14881 ctgcaagcga tagatgtctt gaatactctg gtccatagca tccagcatct gattgatttc
    14941 tgatgaaatg agatacattt cctgctcttt attgtccgtc tgtagacgaa gatgcctgtc
    15001 tgcgccacga atctgttgca tagtatcaac aatgtccagt acttgaactt catatcgttt
    15061 aaacaccctt ctcaggacca gtagtaaaag agcaacgagg caactacttc ctagaaaaat
    15121 gattccgact aggctgccaa ctttttcaat agcatgttgc tggtcaaccc caactgcaat
    15181 ttgcaaatcc ccactcattc gataggagag cggaggtgag gcaacatctg gtctcagact
    15241 ataaaattcc cgatccagag aatcttgaac tctaacggtc atggggagat ccgtcttacg
    15301 ttgaatatat tgttcgagca aatccgcatc gatggtgaca tagatggtcg caataccttc
    15361 tgttgtcgat ggagaaaata aggtcatcga aatactatgt tgcggagcct tgtaattttc
    15421 ggccgtgacc tttttaccag actttaagtc agaggtagaa acaaagacag tatttgcatc
    15481 catcggagca atatcgactc cttctacgaa gggataatag agatagagag tgcgaacaga
    15541 atcctgcaag gaaatccgtt tgaccatcag gtgtgggtga ctcagtaacc agacctgata
    15601 ctgagaagga gataattgaa aatagtgata aagactgtct agacgatccc tgtccgtaat
    15661 gtagtctgct agataattcc caacccgtcc ttgataataa tccaactcct cttttagacc
    15721 atctgctact tcctgttgaa tgcggatacg attggtatca tactgatacc agctgatgta
    15781 ggaaagaata ctggcaaaga aaatgacaat cccaatcact aataaagaat aacttttcaa
    15841 aagagtatga attaaaactt ttttcataag taatccttgt caactttctt ataaactgga
    15901 tcaaaggcat catagagaaa caagagccat aggactggta ggaagaagaa taaaatcaag
    15961 ggaagtttga atagcaagaa cccacagacg agactgccta acaaaaattt gaccagggct
    16021 ttccaatcaa gaaaaagcga gacagccgcc aactgtaagc ctgtttttag actaaattca
    16081 aaatgtactt gaagttttaa aaagagagca tagagcgcaa aaatatagaa aagaccaaaa
    16141 gcatttgtaa taagaactgc tggcatccac caggtctggg gcaattgaat caagagccaa
    16201 atgccactaa ataaaagacc aagcaataag aggacaagac caaggccaag gttaagccga
    16261 ataaaatgct ctttaaaata gccaaacgcc tctcgaaaat tatacttaga tgcatccata
    16321 tgataattgt cgtagaggta aagtatcgtt ccatttgctg gtgaaatgcc cagcactacg
    16381 cctcctagca atagaagaac caaatagatg gcactcaatt tcatgaggaa gaaaagaaga
    16441 gtaaaaagcc tgtctaacca ccctaacatt gtatattcct ccttttttat ctattttatc
    16501 aaaaaatcgg tgctttttgt atatattaac ataaaacaaa tgcaaaagag gctgagcaaa
    16561 aagcccagcg ccacttctta gagttcgtgt cgacatctca tcgcagtggt tgattggcag
    16621 atttgttcgt gttttacact ccaaatccga cctaatcaac tgtgcggggg tgggaagacg
    16681 aactcttttt agacctgtcg agttctttcc cactccctct tttcacactt catcacctgt
    16741 atcgaattat ttatttgcta aaaactcatc gtattgtttt tgcatttctt cttttacttt
    16801 tttgtaggat tcttctgctt ccaatttttt cagcatttct ggaacagcaa catcaggatc
    16861 cacagtacca gtattgatac ttgctgcata ttggctcatg atattttgga tacttgtaat
    16921 ttcagtctta actgcatcgg cattgaagtt gaagccaaga agtggagact cttctgcacc
    16981 tgccagcaat tcttctgctt ttttcacatc ttcatctgtt accttgtcag tgatgtagag
    17041 aatttggctg ttacctgtgt tccaagccga catacgagta tcacctttgt aaccatccaa
    17101 caacttgata cgattttcag cacttgggtc tttttcccag ttgactccct ctggaccaaa
    17161 taccaagccg ttcagcaatt ctggatttgt attgataaga gtcaatactt ccatagcttt
    17221 ttctttgttc ttagatgttt ttgaaatgac aaagtttgct acttgggtag atccgcttgt
    17281 cttataggca gatgtgattg gtttagaagt aatcttatag cctgcaactg ttgaaaggag
    17341 gctatcacca aagtcagctg gtccttgtgt ttcttcacga acgaaccagt ttgctacatc
    17401 aagtgagaag gttgcgtcag tagtcgctgc atctgccata atgtagccag ccttatagta
    17461 attgtgaatg gtacgaaggt tatctatgtg acggtccact tcaaatgggt ttaccacttt
    17521 tgtagtgtca cctttcaaat cgatagcaaa tggtaactca ttcccagctg gatattccaa
    17581 gccgtctgtt gatggtttac tagattttac ccaggcaagt ggtgtaacat ctgcttcttt
    17641 ttctttgatg gttgccaaca ttggttcaat atcatcgtag ctgtctacct tagaaatatc
    17701 gaaaccatac ttatcaacta agtcttgatt gaaggaaagc atctgttgac ttgctacgtt
    17761 accgatgaca gggactgcgt atatttttcc gtcgatggta tttcctttga tgtaggcagg
    17821 gtcaataatg tcatagaggg ccttgccttc tttcttgtaa agttctgtta aatcagcata
    17881 agctcctttt tgcgcattga taatatagtt gtctgcaaag gcaatatcat attcctcacc
    17941 agatgaggta ataatggcca ttttatcctt atagtcaccc catgagatat acttgatgtc
    18001 tagatgggcg cctgcttctt tttcgataat cttattggca ttttccaaaa gaacatcgat
    18061 atttttcggt gcgtctccga tttgatacat gaggatgttt gtcaatccat cttctgttgt
    18121 agtactactt gatgcggtct tatttccagt cagactacca caagcagcaa gggcagctgc
    18181 ggacacaagg gtcacgcagg agtaggcaaa ttttttccat gttttcattt ggctgttcct
    18241 ttctattttt ttagataatg aagtatggaa tacaattgtt aagatagagg gatgtctcta
    18301 ctccttgact ccgccaattg tcaaaccttt gacaaagtaa cgttggaaga aaggatagag
    18361 acaggcaatt ggtagagtcg atacgaccac aatggccatc cgtgttgctt cttttggaag
    18421 ggctcctgca acttctgagg acatggccgc tgctgcggca gcattttcag agagatattg
    18481 aatgtttgct tgaattttca tcagcaggta ttggagaggg aagaggttat cgctctggat
    18541 atagaggaga gcgttgtacc aatcattcca aaaagcgagg gctgtaaaga gagcgattgt
    18601 tgcgatacct ggtagggtta gtggcaagca gatttggaag aaaatccgaa attcactggc
    18661 cccgtcaatc ctggcagatt cgataataga ctcagaaata gtttttctaa agaaggacct
    18721 catcaccatg atattgaaag gagacagcag catgggtaga atcaaggctg ccactgtatc
    18781 tttgagattt aaaaacgagg tcataacgat ataagttggg atggtccctg cgctaaacag
    18841 catggtaaag agagccatca gggtaaaaaa tcgtctgtat ctaaaactgt ttctcgaaat
    18901 ggcataggcg taaagaacgg tgaagaagac attcaagctc gtccctacaa tagtcacaaa
    18961 gaaggtgata aagagggctt ggagaatctg atctttcaat tgaaagagat attcataacc
    19021 tgccaaactc cattgctctg gccagaaaga atagccgttg atagccaagc ttgtctcatc
    19081 tgtcatagaa atgatgataa caaatatgaa gggaagggta caagataggg caaatatccc
    19141 tagtaaactt gagaaaaata gatctgtttt cttactaaat gaatgaatag aaacagaagt
    19201 gatttgtttc ttttttttca tactcccctc ctagaataag gctgattcct tatcaaagcg
    19261 acgaacaatc aggttggtca ctaccaccaa gatacagccg acaacagact gatagaggcc
    19321 tgccgcgata gccataccga tgtcccctgt tcctgcaatt ccacgataaa cgtaggtatc
    19381 aaggacttga gtcacattga agagaggacc tgaatttttc ggaatttgat agaaaaggcc
    19441 aaagtctgct cggaagatat ttccgacagc cagaatcgtt aaaatagtca tcagaggcat
    19501 taactgagga agggtaacat agcggatgcg ttgccacttg gtcgctccat ccacaatcgc
    19561 agcttcatag taagttgggt caatgcccat aatggttgca taataaataa tactgttgta
    19621 gcccaaacct ttccaaattc ctaagaaaag caagatgaag ggccaatagg tcggtgtgct
    19681 gtaccagttg atgggatcca tccccattcc tttgagaata ttgtttatca atcctttatc
    19741 tggactcaaa aatgcgtaaa cgaagaaact gataatgacc caagaaagga aataagggaa
    19801 caaggttgtg gtctgataga tctttaccag cttcttcgac cgcatctcac taaagataat
    19861 ggcaatacct accgcaaaaa tcagtccgag tacgataaaa ccaagattat ataggatggt
    19921 atttcttgtg ataatatagg catcggatga ttgaaataga aatttaaaat tatccaatcc
    19981 tatccactta ctttgtatga gactatccca aaagccatta cctgtatggc gatagtcctt
    20041 aaaagcaatc acattgccaa atactggaat gtagaaaaat agaatgagcc agatgactcc
    20101 tggcaatacc attaggaaaa aaatggcatt ttgttttaga ttttttatga ggtctttcat
    20161 catagctcct ttctattatg aacctttaca ttattagttt actcctgatt gggccaactg
    20221 tgaattgcca cattataggc aaaattctac aaattatagg tgtatataac aaccgatata
    20281 tcttatgtaa aaaaacaaag aaaatatggg ttgctaatca aaatttgcat aaaaaatcga
    20341 gccctttcga gctcgaatat cactaggttg tatagatggt tgaagccgtc gcaataatct
    20401 gccattggtt ggcagtcgtc gcacgaaaac ccttgtcttg atagaagtca tcataaggga
    20461 gaataggcac ttctagttca tctagtttag gtacttcatt gttcagatag gcttgcaacc
    20521 gctggattgc acggagaatg cgggcatcca atccccctag acgaatgtcc accgtatcca
    20581 gaccaaacac cttcttctct accatccatt ggtagctgag tgcctgatag aagctttcta
    20641 ggtctatcct tagttgctgc aaaccgtcaa cttgctctgc caagacctga cgatttcctt
    20701 cctgatatgc ctgacgaata cctactgaaa ttgccgcctt ggtcgctaaa acctgacaca
    20761 acttagcctg agtatcaaag agataggcat agcccttggc tcggcttcca atctctgcca
    20821 atctaggcgc taattcctga taaaaggcac tgtctttttc ggcatcaata tgctcctgca
    20881 acaaggggca gagaatatcc tgatacaaga tgtagcgact gggattgaaa ccgtgatgac
    20941 ctggacctgg gtgactaggt gtcttatttg gcaaatccaa ttgcaggaag tcatctaggg
    21001 aaacttggtg tagttgatag aaatgctcag ccagacagcc caaatttcct ctatactgga
    21061 gttctgccca ggcatgaaga ctcggcaaga tcgagaaggt tgcgcattcc ccaccattgt
    21121 ctccccaagc ggtcaccgtc acttcttgga cgccatattc ttggcaggcg gcatgtgctt
    21181 ctggcgcaat ccgcatactg aaatcattgt ccggagtaaa accaatccat ttccaggcac
    21241 cacttgcaaa ggcaatctga tctcccaact gctgatgact tgccagtttt tgagcataac
    21301 tctcacggct ggtctggtag taatcccaat aaatcaaggt cactctgtcc ttgagacgat
    21361 ccaaataagc ctgaatttcc gagtcaattt ccaactgacc agtataatcc ttactagcag
    21421 tcagcaactg atagaacata tcactccaca tactacaatg gaaaccatac ttgtcagcaa
    21481 tatccaaaac ccgttccaag tgttggcaca taatcagact tcgcttctga tagccgtgtt
    21541 gattgaggta ttgccccagc ccgaccaagt gagcctcatc cataccgatg ttaatggttc
    21601 gtgttttcag atgggacaag gcctcaaaca tcttatcaat caaggcatag gtcctctcat
    21661 ccccaatcaa gagaatatta tccacatctc gaatggcctg aatagatgat atattccact
    21721 tgaggtaggc aatcagatgg gccaaggtct ggatacaggg aataaattcc ataccgtaat
    21781 ggtggcactc ctcctcaata gcctgcaact cttcttttgt ataggcccct cggaaatagc
    21841 caaaataggg ttcatcacgt agttggtagg tatcttccat gtaaagctgg aaatggctgt
    21901 agcccatcaa ggccaattgt ctaatcaaga tcttactggc ttcaaccgtc aggacagcat
    21961 ttcgagaaca atcttccata aaaccgagtt gacggtaggc aggtttttct agaatctgta
    22021 tgtcagtctc accctgagcc aactgactag ccaaaacaag tagccccctg taaatcatat
    22081 gttctttggg cgcacggata cggtaagaat ctgctgaacc ttcaatccgc aaaccctcct
    22141 tgccatcgac ttcaagttct aactggcaat ccaagccaag cgaggaacaa atctcttcca
    22201 agaccctctc cgactgctgt aacgaatggt ttatctgtaa catcatcatt tctccttatt
    22261 gtagggtctt catataagca cccatgagat tggcatcctg ctggtagtgg caggcacgaa
    22321 tggcaggtag ataaggaaat tcttctggat attccttttg aatagcctct agttgctcct
    22381 gaatagcttg gataaagact ggattctggc tgatagagcc gccgatagcc agcacttctg
    22441 gttccaggaa ataggagata tttaaaatgc cataggccag attgcgtgtc atttcttcaa
    22501 tggctaattg acatacctca tctccctgtt ctgctagttc aaaaatccgc ttgccgttcc
    22561 aatcttccac agcttcctca tactgactag caacctgtct gaccaaactt ccagtagaag
    22621 caagttggga ccagtttttt agaggtccct ttccagtagc aatcagcata tagccaaatt
    22681 cgccaccgaa accttgtttc cctcggatga gttttctatc cacaatcaag gcaccaccga
    22741 tacccgtacc acagacgaca caggcaaaag tcgataactg gtcatcaaca gccaattcac
    22801 tcagaccgac acaattggca tcattttcca aatacacagg acaaccatac tggcccagta
    22861 actcatacca agatacacca tggatataag gaacggcact cagcccctgg atgacacctg
    22921 tttcaatatc cactgctcca ggtatactga gggaaatagc ctccaagcca tctaccctct
    22981 gaataacact gtccataagc accaacaatt cctctaaact agatggcgtt ttccattcct
    23041 gtcgatggtt gatctgctta tctgaaccaa tcaaggccgc ttttataccc gtaccaccaa
    23101 tatcaaaaca ggctactacc atattctttc tccttttcaa gatagccaat gacctctgtt
    23161 cggattgcct gaggttcaat cctagccggc aaatcctcta gtggttcttc tagcaaatca
    23221 accccctcag tccactcgct ccaacctgct aactgctcct gactcatatt gtagtaacgg
    23281 agcagaatgc ggtccgaagt ctctgctacc ttcaaagaag tcacgcataa gcggtcctct
    23341 tccagtgctg gatggctcaa aaactgatga tcacatggca gatgcccact atggctggtc
    23401 agttgtttag ttagcaagtt tccttggaag gcttgcgctc tttggaagct ggcaaaacat
    23461 tcctctactg ggcaaatttc aaaggcatag tccaactgac attccctcaa acactgggct
    23521 tctggtgttg ggaagtagcc ccaatctcct agctctccag tcgcacgaag tagtgtcaaa
    23581 gctatcttgc ccctatctag gatttcatac tcatgtaggc ccttgctcga aacggtcatg
    23641 gcttgtcgac catctgatag acaaataaaa ctacgatgac gctgaggatt ggacggattt
    23701 tcccaagctg gatgaggctg atttggacgt tcaacgactt caaagatgga atccgccaag
    23761 tggttctcag cttctatacc aatatcaaag actgctcgta agcgatggtc cttgatttga
    23821 ttgtggaaat tggtctggat gcgaatttgt ggttgatggc ggtagagggt cagataggtg
    23881 gtaaggagca ggtctttctt ttcctgactc ctttgagagg ttcgatgttt aaattctacc
    23941 aggcgcttct gttcatcttc cagacttgtt tccatagcta ttggcagtcg caaacggtga
    24001 atgaccttgg caatgctgac tgcttctgtt tggtagacaa gttcaaagtc ctctatctga
    24061 ccatagatca gttgattatt cttaggcgcc ataaagatgt attcattgcc caaatctcca
    24121 caatcttcaa agcgtagcca gtctttatag gcttgacccg ttctcttgtc ttctagtaag
    24181 agctgaccat ccaccacgtc aatacggtag taatcatttt caaaatgttc acttaaacta
    24241 ttgctcaccc gagtatcaac aatcggcttg acttggtagg tctgccatga aaatggtgcc
    24301 tgattttcca ctacaaagcg gacacgaatc tggcgggcaa aattggcaga gcgaaaagca
    24361 tcttttggta aatcgtaacg gaagttgaca cctagatctt caatggttgc ctcaagctct
    24421 tggccttgac tggtaaagag gcccaaggct ggcagagaaa tagctgccat ggattggaag
    24481 tgttgttcta actgcccatc tcggaaatcc tcctgttcaa caagcaaatc aacctccact
    24541 agttgggttt gtcggcaggc tgtagtattg aaaaccgtaa atagtaagcc gtctaattgg
    24601 ctagaatcca cctgcttttc ccacctgtct agggagcgct ggctcaagaa atgagcgact
    24661 tgcttgacct tcttaaagcg ggtttccatc tcactatgca cctggtctac gctacaacca
    24721 cagatgctat catggggggc attctgcaaa agaagtttcc aagcatagcg taactcatct
    24781 ctcggcacct tatctcctgt catcaccacc aagggttcta caacttgttc caagagctgg
    24841 ctagcctggt cattggcttg cttgagataa attctcgaag aagccgtatt tgccaaggtg
    24901 taccagccat ctgtttcctg gctagtcaat tctcccttga cacgactgag gtcttttggt
    24961 aattcttcct tgacagctgc gatatattct tcaaagcttg aatgaacaaa gtctatatct
    25021 ggatacagtt ttcgggccag tcgtaatgct tggctgagat ttttctggac aggctggtga
    25081 tcacagccat tcatcagcag atagtgggag gttgaagcgt atttgcgaac atctgccaat
    25141 tttttctccc agaaaacacg cgcttcctcc tcatcaactg ggatttcatt gccattgctg
    25201 taccagttag caaataaaat tcccagaacc tgactgccat ctgccccttc ccaaatcatc
    25261 tctgagaaag ttgactggaa ttggtcatct cccaaaacct gattatcaaa gccaactggt
    25321 ttgaccccac gaccaaacaa ggccacatct ataccagcct gacgcagtag ctgaggagcc
    25381 tgtcccatat ttccaaaagt atctggataa taaccaatct tcggagcccg tccccacttc
    25441 ttgctttcca agtgacccag aagggtattg cgcatattgg cctcgctggt gatgaggtaa
    25501 tcatcctgca agatgtaaaa gggaccaata atcagccgac cgtcttgaat gtatttcttc
    25561 aataactctc ggttctgcgg acgaatttcc agatagtcat ctaggacaat ggtctgtcca
    25621 tctagatgaa aactcctaaa ctcaggatct gtttcaaata agtcaaacag gtcatcaaac
    25681 agctctacta agcgcatccg atgctcttcc aaaggaagat accattccct atcccagtgg
    25741 ctatgtgaaa taatatgaac cgtttctttt cccattttat tcctccggtc gtatatcata
    25801 ataatctaaa accaattcgc aaaacatcat atttgcccag gagaaccact ctctggagta
    25861 aagcgtcgga tcatccacat ggaaactctc atgcatcagc ccagtaccac catcacaggc
    25921 taccatggta tccagcaagc gcgctttttc ttccttgtca tccgttgtca atccttgaat
    25981 agccaaggcg atcggccaga tatagcgata gaaggtatga ctggaaccaa gaccagcagc
    26041 atagtcgccc tcgtagtaat agggattttc ttgacttaaa atagtccgac gggttgccaa
    26101 atagatggga tcatctttct gacaatagcc tagataggga gccgctagca aactcgggac
    26161 attgggatca tccatgatag actgattgcc caagccgtcc acttcatagg cgaaaatggt
    26221 ttctcccgcc tgattcttgg tcagcccaaa ggtccgaatg ccctggtcaa tttcctgcgc
    26281 caaccgtctg gcaccttcag ccaaatctga gaattcctca ctggcaaact gctctgctat
    26341 ttctcctaaa taacccaaga cgacgaccgc aaacatattt gaggggatga ggtaagggta
    26401 gatacaggcg tcatcgcttg gacgaaaacc agaccaagtc atccctgtat aggtgcaggg
    26461 agcccctttt ccttgatgcg tgagggtatc ctctagccgg tcagtatccc gttcaaagct
    26521 ataaggggag ttttcatggt gctgctccaa tttccagagt tgaacaattt tttcagctgc
    26581 cccaaagaag gtctggttaa aatgactggt ttcccctgtc gctttccaaa gtagataggc
    26641 taattgaagg gggtagcaga gggaatccac ctcatatttc cgctcccaaa tccagggtcc
    26701 catctgagtg tggtcggtct ggtgcccccg cccattagct acctgattaa aggcattggc
    26761 ataaggatcc atcaaaataa aagccatttg cctctctacc agacctagaa tcatctggcg
    26821 taatttctca tcttttctag ccaaggctaa atagggtttg acctgggctg tcgaatccct
    26881 caaccacatg gctggaatgt cccccgttaa gacaaaagta gttccatctt ccagttgact
    26941 aatggtccta tcaagcgtat ccgtataaca cctttcaaat acactccccc aacttgggtg
    27001 gtctgctgtt ttcttttgaa tgcctgtcag ccagttctct atgatttctt ttgtgtaaaa
    27061 catgatttct cctttttatc ctttgctcag agttcttcca acctctatct ggcaaatcca
    27121 tgtagtttca ttagacacaa ggttcctagt atcagtctat acaattccaa atgcaaatcc
    27181 tatacacaaa ttaaacgcat ttttacacaa atattgccag tttcggaaaa cgctttcctt
    27241 tctttccctt tctctatata ataaggagac accacttatt atcaataaaa aagaaaagga
    27301 tagcctatgt atacctccat cgtttcaacc attgacaccc gctatggtac ttataactca
    27361 catgcctttt caaacggaaa caccctacca ttgacagggg tccctttcgg catgaattat
    27421 tttgctcccc agaccagcga ccagactgga aactggtggt tcaatcccta tgaacctgtc
    27481 tatcagggca ttcgcttaac ccatcaaccc agtccttggt tgggagattt tgcctccctc
    27541 ctattgacgc ctgtcacagg cgaattaagc cgagatagca tctttcaccg tcaatctagc
    27601 taccaactgg atcaggctat tttccgacct gacctccttc aattacaatc caaccgcttt
    27661 cgcttgataa gccgtttagc tcccagccga tacggagcca gttttgagat agcatctttt
    27721 gctaaccagc ctatcggaat agtcttctat tcatctggaa aatccattta tcgactgctc
    27781 aatcctcacc aactcctcat tcagattttt caggtcagcg cctgccaatc ccctgatttc
    27841 tgcatgtatg ctctcctaga atttgaagag gaaataacag aatgttatca tctggtcaag
    27901 gatcgcaaga tagctaagac ggaagtggtg ggagaagatt tgcaccttcg catcaatttc
    27961 tcaagcactt ctatcaaggg gcgtttggcc acctctttta tcagccctga gcaggccgcc
    28021 tttctattaa aagatgttcc tgacttcccc caagcccaaa aacaagccga aaagacgtgg
    28081 aaccaactac taggacgtat tcaaattcgt gaccaaaaaa cagaagacat caatttcttc
    28141 taccactgcc tctatcgttg cctactttac ccacagactt tctatgaacc tagtcctgat
    28201 ggacaagcca ttcatttcga ccctatcagc aatcaggcca aactaggtaa atttttcacc
    28261 aacaacggct actgggacac cttccgttcc tcctatcctc tgctttcact tatctaccca
    28321 gactatttgg aagagtttct ccacggtatt ctccaacact atcgagatac tggattttta
    28381 cccaaatggc tatcgccaga cgagcgcggt atcatgccag gaactcttgt ggatggagtc
    28441 attgctgatg cggcctgcaa gggacttgtt cctgatttga tggaagattt tctccaagcc
    28501 atgattgaaa ccagtcaaaa gaccgatgcg gatcaacgtt acggccgcca tggtagtcag
    28561 atttaccgcc agttaaacta tctccctctt gatttcaatg aatccgttag ccattctctt
    28621 gattatgcct acagtgattg ggctatcagc caagtagcag aaaaactggg gcaggaccaa
    28681 ctggctaaac aatacgctca aatgagcctc ggctaccgac agttattcga tagccaaaca
    28741 ggtctcatgc gtgccaagga tagacagaaa caattccgag cagatttttc ccctctaagc
    28801 tggggaagag actatgccga atgctctgtc ctacaagcaa ccctgtccgt ctttcaagac
    28861 atcgatggac tgatagaatt gatgggcgga aaagaagcct ttaccaccta tctgatccag
    28921 ctctgtaatc aggagcccta tttctcacct gaacaatacg gctacgaaat ccacgaaatg
    28981 tcggaaatgg cgcaagtcaa tctcggtcag cttgctattt caaatcaacc gagcttccat
    29041 atcccttatc ttttccaatg gtccacaaaa ccagaataca ctagtctact cattcacaaa
    29101 atcagacaaa cagctttcaa gacaggtttt caagcctatc caggtgacga ggataacggt
    29161 agcctctcag cctggtacat tttctcctgt ctaggattct accctgtctg tcctggaaaa
    29221 gccgactacc aaatcggact accgcatttt aaggaagtag acttgctact tgcagatcaa
    29281 cacaagctga ccatttctac tccaaaaagc gatgcaaatt tccagtttgt caagcaagtt
    29341 tcattagaca aacaagtcgt ccaaaccatc aagcatgacc aactgataaa atcaaactgc
    29401 ctagaatttg acctatctat acttccaagt aacgaggcat actcttagaa aaataaatag
    29461 tcagggagca ccccctgact atttatttta ttcaccttgc tttctgagct tagctaactg
    29521 agataggcca gccagagcca caccaactaa cccaagaagg acatacttct cctgataggt
    29581 atcaccagtt tgtggaagaa cgctcttctg cagagaagca tctctgattt gcttttcaac
    29641 ctgcgggcta ttttctacca ttaaagtctt ctcttgctgg ataggcaaac cgctgccgac
    29701 ctccactatt ttcggctgac tctcatcagc aactattcgt gaatacagct cgcgacggcc
    29761 atcactatag actaggtgag ctatcatcat ttgaccatca gccccctcct gaacaattcg
    29821 ctctttgccc agtggcaaat cagtgctggt ccgtgtgatg atttgtctcg gcaccagctc
    29881 ataggtcaaa tccattctcg gtttttcagg agctagtaaa ttcttagact ccatcgaatc
    29941 tcttgtaccg acatgagtta ccagactaga ctgttcaaac aaatcagtcc attcactgag
    30001 cagctccttc atctcatctg gacgaatact atccgaacct aaaattttct cagttttttc
    30061 aagtaaagaa ctcagctcag aagaatttat aggcctatct attcctttca cctcttggat
    30121 tagctgattg agacgcccaa gatctgcttg gtaaagtttc tccccatcca gctctcctaa
    30181 ctgtttctct aaaagagttt gagcggcttc aacctgttcg actgtccgat tggtatctgc
    30241 taccacagac ttagcttctt ccaaggcagt ttgcaaggca agttgtgtct gctcactaga
    30301 atagagatag gctgtttggg tttgtagagc ctcaatttct gctattttct gctttagata
    30361 ctcatcattg acgattggct tcggtgaaac aaggacatca aatgaagtct ccaaaccagc
    30421 ataccgcaaa cctaggctct gacgcccctc tttacgggaa tcgaaaccaa caatttctac
    30481 tccagcttct gtcaaagaga aggactgagt tgactcatcg tcatagataa tagcaaatcg
    30541 accatttgtg acatccaaat catctcctac aacatactgc acttttggta actgttggat
    30601 ttctagaccg actgcttttt tctcaccttg ggctatatct tcaacaacat ataccatcag
    30661 tggctgagca agtgtttctc ctagatagga aacggtcaat gtttgttcac ctaatttttg
    30721 cggatcaaat ccccttactg taactgccgg attggtggca ttcactcgtt cagcaggcca
    30781 atctccttca aaaactacac ggaattgtgc tcctgcaagc gataaaggac taccttgtcg
    30841 gtaaactttt ttctctaggg gagctatcca ttccatcgct ttcacgactt tttcaccttg
    30901 cggaacgcga atggccaata gattgctcca atcctttcct tcctccagag tacggtagta
    30961 aatgaactca ggcagggact caaagcgaat cgggtcgaat ataagatttc ctgactctgt
    31021 cgtttccaat tctgccagtg gttttacggc atctgggcta gaataaagcg ctattttccg
    31081 attggcaggg acatccttga aacctacttg aatctgatga ttaccgagat gacgagcaac
    31141 agcatgggtc atcggaatat ttggtgtctc catgtccaat tcttcataca tacgccaatt
    31201 ataaatacga atggccttcc aaggagtacc attatcagaa gtcaagacat ccaaacgcca
    31261 ttcctgcgct cgaattggct tgtccaatac gatgtctgtc acatgatcac gattgccacg
    31321 aacttctttg gctaacaccc aatcaccatt ctcattttta taatagagat cgaaatcctt
    31381 ggtgttcatt aagccatcat tgaccgattc accacctgca ccagcatgat ccatagccca
    31441 tcgcacgact gtccgaggtt gggtcaaacg aatatctaca tggccactca attgatggga
    31501 agaccattta tctgacagac tggtaatggt cccattcaac atgccctcaa tgccttctcc
    31561 accttctttt ttagcaaaac ttgaaccgat gacttctgct ccgagaacaa tgttttctgc
    31621 caatggttta ggaaggctag tatctttcac cgtcatttcc caatcaaaga taaactcccc
    31681 tgcttccgaa cgcaaaccat ttttcccaac ggcatgaact ttcaaagctt gagttcgacc
    31741 ttccgcctgt gcagaacgaa ctagttgagg gaggtaaatc cttgtattag aagaacctgt
    31801 cagcaatttc cactgtccgt cgacctgcgc atatacttca taatagtctg catcatctgt
    31861 ccctgtaaag ctaatcacag cttcagcatc ttgggcattc ttcaatcgct tagcaaggac
    31921 ttggccatct ttcggtgcag taggtgaatt ttcttggtcg taaatagcca actgccctaa
    31981 acgaaaatca aaatctgaca gcgctgcttc attttcaaca accacttgga caccgtacac
    32041 tgtctttcct gccagactag ataaatcaaa ggtctgatct tgccaatctc ctgatagttt
    32101 aagcaagcgc cacgcttctt tattcgcaaa ttgataatct ggttcaagcg ctagagctag
    32161 ggagatattt gtaccttgcc ctcctttgtg cgcaaccctc aaacgacttg tttctgatag
    32221 aggaatcttg gtggaataca acttaatttc ctgcttacca tctttttcca aatcgcctgt
    32281 aaaccgaaga gagttgcccc cattataggc atcatcaaaa tcataagccg cagcaagctt
    32341 ttcaccactt gcttcaatcc accaccgcca ggttggtaaa ataccagaca cagagcgata
    32401 attccattcc ccatctttgg caaccttgcc atctacaaac cattttttcc cgtgccctgt
    32461 attaaaggaa ctattgaaat tactgcttgt aatagccgtc ttatccgcaa tgagattggc
    32521 caagccatac caatttttat ccgaaggttt ctgtttggtt ggatcacctt gatagcctgt
    32581 aaagaagata ttctcattct catgataatc ctcacccgtc gcacccaaac ttgtaatggt
    32641 atctggcgca aacagaccga gtgataattt caatttcccg ttttcatcaa acagagcatc
    32701 ccagttaatt tgcgttttgt aagagcctcc ccgttgcaat tcaaatccag caaaaatatc
    32761 aaatggatct cgaccgattc gtttcgccac ttcgattgaa ttgttatttt tggcccgtgt
    32821 ccagttaaaa ttcgcaaaga aacgatccgc aggaaccttg tctccttcct tttccataaa
    32881 cggatagttg tactcaccca aaccatcttc gtgatagcga ccatattcgt aggtcatggc
    32941 atcataccaa gaatacgtaa tcggataacc aattgattct gcatattcct tggtatagag
    33001 catgaagttt ctcattgttt cccctagtgg ttgaaccaag cttcctgtag tctcttgatt
    33061 aatgaaataa ccatcgaaac catagtattt agccatatct accaacttac gtgcaacagg
    33121 aaaacttcca tcaggatcct gtctcataga agatacaaac ttctcttggt cttcaatact
    33181 actggaccaa ttgtagaaaa tcgttcccaa aacaggcaca ccattgcggt gtccagcatc
    33241 aatgacgtct gggctaggaa tcaagccttc ccaaaatacc attgaatcaa tatactgcca
    33301 gtaatcaaag gcataggctt taaactcttc tccccctaca gaggcatggt ctttcgcctt
    33361 agagttagta tttgaaagag cttctacctt tgcattctca ttggctctct cattgacgac
    33421 atgccctcta aagcgctcaa ccaactctac agaagcacgg ttcaaatcat catctggacg
    33481 agcacccggc tcccaagcaa gcacctgatc ccagttgtca aacttaatct ctttcggacg
    33541 aattccttga tcctctacct gaggaaaatc tgaaagcaac agaccagaat ttgaagaatc
    33601 tacctcttta tcttccgctt cctctgtatc ctctagttta ttttctggat tatcagacgg
    33661 agctgaaggc agtttttctt ctctactatc tgatacagat acttctccat tcaactcttc
    33721 ggtcaccgct ttctcatctg ttgaaattgg taatattcct tcttcagctt cggttttttc
    33781 cacatgttcg ttcactacgg aagagagttc aacagctggc tctgacaagc tgtccacatt
    33841 ttctagctgg tccgcagaaa cctgtgttcc aaataaggtc gcaccaatca aaacagaaca
    33901 agcacctatt gtaaattttc gaataccgaa tcgctgacgt ttgtcgaaat cacattttgt
    33961 catattttcc tcctacacaa ttgtagtgca acagctgttc tcaatttcct ccttcccaga
    34021 tcatagttgg cacatgctac ctttgataga actgctatca cacgaagttt atcaggtttt
    34081 attaattcca ttgtacagag gaaaaatatg accttcaagc cctcatggtt cccttcttta
    34141 aatcagataa aaagaacttt agtttagaga aaacaaaaaa gaggaagttt ccctcctcgt
    34201 tgtcttcgtt aattattttc tacaaactta atacaccagc ccaccagttc atccaggcgt
    34261 tccatctgct cggtcatgtg caaatagccc aaaactgcct caaagcctgt ggacatccga
    34321 taggtgacca cgtccgcatt cttggccttg gtatggctat tggtattgcg cccccgcttg
    34381 tagatttctt cctctttttc ggtcaatagc tgagcttcta agagggcaga aatcaggctt
    34441 gcctgagcct tggccgagac gtatttgttg gcctctccat gcaatttgtt aggcttggtc
    34501 agccccttga aaatcaagtg ccgtctgaca tacatggaat agacagcatc cccttcgaaa
    34561 gccagggcaa tgccgttgat gagattgaca tctactgcct tagtcacgtg tccacctcac
    34621 accatccttg gtatccaaga gcttgatgcc ctgggctgcc aattcatcac gaatacggtc
    34681 agccgtcgca aagtcccgat tggcacgcgc tgcttgacgc tctgctatca aggcttcaat
    34741 ctcgctgtcc aagacttctt cctcaaagac aataccaaag acggcgagca tcttgccaaa
    34801 ggcttctttt acagtttcat cgtaattgcc tgagttgatc catttggcaa agtcaaagat
    34861 agccgtaatc ccatttgccg cattgaaatc atcatccatg gccgcttcaa aggccaccag
    34921 atgtaattca agagctgatt tatccacaga gttttgcaca ggttgtgtat aagtattttt
    34981 cagatatttg agattgattt ccgcatctga aatagccttc tcagtgtagt tgagtggacg
    35041 gcggtagtgc tgggtagata ggaagaagcg caagacctgc ccgtcgattt gttccaacat
    35101 atcatgggca gtcaggaagt tgcccaagga cttggacatc ttctcatcgt tgatgttgag
    35161 catggcattg tgcatccaat aattcgcaaa agtctgacca gtcttgcact cagactgggc
    35221 aatctcattg gtatggtgag ggaattccaa gtccgcacca ccaccgtgaa tatcaatggt
    35281 agctcccaaa atctctgtcg ccataaccga acactcgata tgccaacctg gacgaccaac
    35341 tccccaaggg ctttcccaag acacttcacc tggcttggca gttttccaca gggcaaagtc
    35401 gaaaggatgt tctttcagtt gaccttctcc ctcaactcga ccagaagcac cagcctctaa
    35461 gtcagacagg gttttgttgg ccaaacgagc ataattctcc gccttttcca cacgaaaata
    35521 aacatcgcca gccgcttcat aggcgtagcc cttgtcaatc aagacctgca caaaatcgat
    35581 gatttcatcc atgtagtcga tgacacgagg atttttggta gcaggcttga cacccagttt
    35641 tgccacatct tcctggaaag ctgcgataaa tttatcagac agttcctttg ttgtcatgcc
    35701 agcttcatta gcagctttga taatcttgtc atccacatcc gtaaagtttg aaatgtaggt
    35761 cacatcatag ccacggtatt caaaatagcg gcggatggta tcaaaagcca cgacactacg
    35821 ggcattaccg atatggatat agttgtaaac cgtcggaccg caaacataca tcttgacctt
    35881 accctcttcc aagggcacaa agtcacgcag actgcgagtc atggtatcgt aaattttaat
    35941 catagcttct ccattacttc tgagtattct ttaggacttg atacttttga tacaatttta
    36001 ctagccaata agctgtcgcg gccaaccaaa tcatccctac ctgccagctt ccttgagaga
    36061 atttaaggat aaacatgatt gtcccagcaa tggcggtcaa cacataaggc cagttttgtc
    36121 ttactaattt ttttaacatg atctactttc taattttctt gcaatcgctt tgtccgtcgg
    36181 ttcaataact gcataggtgt tttcaaattc ttctagtagc atgtcaacct tctttcctac
    36241 aaatgtgacg aatggtggct ggcttctcgt aattccgcaa gcttagtcgt gtagtgttca
    36301 cggccatctt ccatgtcatg aatgaccttc tcatcttttt gaccatgcac acggacaatt
    36361 ttagctggca taccgaccac tgtcacatct gctggaacat cggctaggac aacggcagct
    36421 gcacccactt tggcattttc tccgatttca acaggtccaa taacctgtgc gtgtgcagaa
    36481 acaagggcac cctttcggac agttggatgg cgtttgcccg tatccttacc cgtaccacca
    36541 agagttacgc cgtggtaaag catgacacca gactcaataa tagccgtctc accaataacc
    36601 aaaccagctc cgtggtcaat gaaaaccccc gaagcaatct cggcgcctgg atgaatttca
    36661 atattagtcc aaaaacgcca aaattggctg tgcatcctag ctagtaattt aaaacctttt
    36721 ttccacatcc agtgggacag acgatgggca gccaaggctt taacgcctgg gtaggtcaaa
    36781 agaacttcca aggtcgtccg tgctgccgga tctttttctt ttacaatctc aatggtgtcc
    36841 ttccaccaac ccatagtcac tccttctagc gagaagacaa gcccgctacc gaacttgtct
    36901 actcagctta tttcttttca accttgtgga atttgaattc accaaagttg ttatcttttt
    36961 tctctttatg gtctcttgga cgacgtggtt tgtctgaacg ctcacgtttt tctggctcta
    37021 catagccttc tggttttgga agaagagcct tcatagaagc gtcaatacgt cctttatcat
    37081 caatcttgat gactttaaca tcgacaatat cgccgatttc aactagatct tctggtttat
    37141 taacacgggt ccaagccatt tcagaaacgt ggaccagagc atctgtcttg tcaaagaggt
    37201 tgacaaaggc accgaatttc tccaaacgaa cgacttttgc ttggaagact tcgtccactt
    37261 ttgcttcacg aacaagacct gcaatgattt ctttggtccg ttcaatcgca tcgcgatctg
    37321 gtgagaagat agccacaaga ccgtcttcgt caatatcgat tttcacgcca gtttccgcaa
    37381 taatcttatc aatagtttcg ccacccttac cgatgacaat cttaatctta tctacatcaa
    37441 tcttgatagt gtcaatcttc ggtgcagttg gtgccaagtc aggacgaact tctggaatag
    37501 tcgcttcaat cacatcaagg atttcaaagc gagctttctt agcttgtgcc aaggcttctt
    37561 ccaagatttg cggtgtgata ccatcaatct tgatgtccat ctgaagagct gtaataccat
    37621 cacgggtacc agccaccttg aagtccatgt cgccaaagtg gtcctcaaga ccttgaatat
    37681 cagtcagaac agtgtagttg gtgccgtctg aaatcagacc catggcaatc cctgcaactg
    37741 gtgccttgat tggcacacca ccggccatga gggcaagggt accagctgtg atagaagcct
    37801 gtgatgagga accgtttgat tccaaaactt ctgccaccaa gcggatagcg taagggaagt
    37861 cttctaggct tggcaagact tgctcaagag cacgctcacc aagggctccg tgaccaattt
    37921 cacgacgacc tggtgctcca taacgacctg ttgatcccac tgagtattgt gggaagttgt
    37981 agtggtgtaa gaagcgtttc ttatactcat catccaaacc gtcgatgatt tgggtttcac
    38041 ccattggtgc caaggtcaag acagaaagag cttgcgtttg accacgggta aagaggcctg
    38101 agccatgaac gtttggcaag aagtccactt ctgcgtctag cggtcgaatc tcatcgacac
    38161 ggcgaccgtc tgggcggacc ttgtcttctg taatcaaacg acgaacctct gcgtgctcca
    38221 tgagctccaa gatttcatgg acatcacgca tgatacggtc aaattcttcg tgctcagcgt
    38281 atttttcttc gtaagctgcg atgacagtct ctcgaacggc attggtcgca tcttcacggg
    38341 ccaatttttc ttctacctgc accgcttttt tcaaatcgtc attgtaagct gcaacaatct
    38401 cagcctgcaa ttctgggtcc acttgaagaa gctccacatc tgctttttcc ttgccgacag
    38461 ctgccacgat ttgattttgg aagtcaagca gttcttgaat agccgcatga cctttcaaga
    38521 gggcctccag catgatgtcc tctgacaatt ctttggcacc tgactctacc atattgatag
    38581 catccttgtt accagccact gtcaagtcca gaagggactc ttccatttgt gccttgtcag
    38641 ggttgatgat gagctcacca ttgacatagc cgacctgcac acctgcgatt gggccgttga
    38701 atggaatatc tgagattgcc aatgccaatg aagaaccaaa catagctgcc attggagcag
    38761 aagcatctgg atcgtaagaa agcactgtgt tgatgacttg gacttcgtta cggaagcctt
    38821 ccgcaaacat tggacgaatc ggacggtcaa tcaaacgagc tgtcaaagtc gcatcggttg
    38881 atgggcggcc ctcacgcttc atccagccac ctgggaattt cccagcagcg tacattttct
    38941 cttcatagtt gacttggagg gggaagaaat cgcccgtcgc catttttttt gacataactg
    39001 ccgctgtaag aactgttgag tcgccatatc gaacgacaac tgcaccattg gcttgtttgg
    39061 caacttgacc tgtttcaacg accaattttt tgccagcaaa aaccgtttca aatacttgtt
    39121 ttgacatgaa ttgtctccta ttttttctga aatttttctt gcgtgttttc tacaaaagac
    39181 aatcaaacaa gcttgtttca ctctcttttg cacaaaacca cgcatactcc ttattttatc
    39241 atatttgacg gaaaatgtgg ggaattgagg aaggaatttg agggaaaatc taacctgcca
    39301 taaaaacaac tgatcgaaac gaagactctt caatcaaacg aagaacaccc agcttttctg
    39361 agtgttcttt tgtgtattct atttgaacaa tctcatatag tcgctcttgc ttgcgacaag
    39421 atagcgaacg tttacgacct tttgtgcttc atcaatgtta taaatagcta tataatcctt
    39481 tttgatgggc agtcctcgcg tcagatgacc tgggactagc ggtccttttt tagagcgttc
    39541 atctacgtta aaacctcgct ctgggaagat ttcaaggctt ctaagtcctg ctattagctc
    39601 ttggattttt ttgtccgctg catcagggct ttttaactct tcgctgatat agctacgaat
    39661 gcctgctagt tcctcgtata tggctagagg taggtttact tggtacttat ccaaagagct
    39721 tggtctccat ttcgtccaat gatagatagt tgcccgcatt catttcagct acatttttca
    39781 tcacttctgc ttgcagttcg gcaaatagtc gctctttttc cagttcttct tcacttttaa
    39841 gcccaatttc tcctgttact acaatatttt tgagaaacag gttgagggct tgtgtcatgg
    39901 tcatattttg acttgccaag acctcttttg cttcttctac aagtgatttt tctgattgaa
    39961 agttaatcaa tttcttttca gctgttaagg ccataagata atacctcttt atatttttct
    40021 ttattgtaat ctttatatct tgaaaaatca atccttaacc ctaaacaaca tcattttttc
    40081 cgaaaaactt aatcttttag aattgttaac acgaattgca ttcgctccac ctccaacagg
    40141 ctaaaactca aaaaaaaaga aaacgggaaa acaaaaaaag aacctgaaaa acaggctctt
    40201 tctgaattga actcgaacga aaatcctagt gaaaaagata gattgccttg cgacgagtcg
    40261 ctgtgacaat ctcctatttt catacggatt tttttgcgtt ctcgtatctt gattaacgac
    40321 ggagtccgag tgagtgaatc aattcacggt aacggtttac gtctgtgcgg cgtaggtatg
    40381 ccaacaagtt acgacggcga ccgatttttt tcatcaaacc acggtaagtt gcgtggtctt
    40441 ttttgtgttg tttgatgtgg tcgttaaggt ggttgatttc ccaagtaagt actgctactt
    40501 gtacttcaac tgaacctgtg tcgccttcat gacgagcata ttgtgccatg atttcatttt
    40561 ttttctcttt tgagattgcc atgatatgtt ctcctttgtt tttgagccta atccgagtga
    40621 caggttggcg acctgtaacc aagaaaaagc tagatttgtc cttttggacc tcatttattc
    40681 tatcaaggat tgtctttttt gtcaactgat ttgaaaacta gcaaagtagc tctgctattt
    40741 tcaaaaaaag ccagccgaag ctgactttct actattcttc caaatttact tactcagcct
    40801 tttctgcttt tggcaagata agattgagga taatacctac aatggctgag agggctgttc
    40861 ctgagagggt gatggcaccg atgttgagaa ctgctccacc aagacccaat accagcattg
    40921 agcttgcaat aatcaggttg cggacttgac cgaaatcaac acggctttca atcaaaactt
    40981 tcaaaccgtt tgaggcgata acaccgtaaa gtaagataga cataccacca agaacggcac
    41041 ttggaatagt tgagataagg gctgtaaatt tacccaagaa tgagaaggca atggcaatca
    41101 aggctgcgtt acggataacg gatactgatg cgatgcgagt cataccgata acccctgtat
    41161 tttcaccgta ggtcgtattg gctggtccac cgataaaggc agatacagca gtcgctacac
    41221 catctccaat caaggtacgg ctgaggcctg ggtctttcaa gaactggcgg ccgcagattt
    41281 ggctgagaac ggtgtggtca ccgatatgct cagctactgt tacaacagca attggtaaga
    41341 tagcaatcat ttctggaccg aagtagaaat tgtacaactt gaaggcacct gtttcaaatg
    41401 gtaggtagaa acctggcaat tcaaaccaag ccgcttccaa aacgggtgtg aagtcaacca
    41461 aaccaagaca gagggcaatc acgtaaccac cgacaatggc aatcaagaaa ggaacaatct
    41521 tggcgaagcc tttccctttg gtattgacaa aagcagcaat caagaaggtt gcaatcgcca
    41581 cgacgacgtt tttccagtcg ccgtctgcga cgaagcccgc tgaagtcacg gcagagttgg
    41641 caagaccaag tccaatcacg ataatcattg gtccgatgac aatcggtggc aagaggctgt
    41701 caatccactt agtaccgata actttgacaa gtgcagcgat caacacgtaa atcaagccga
    41761 cgaagagaat accagtctga gctgccgaca catcaccacc catttccttg atagcaaggg
    41821 ccatagctga gatataggca aaggaagaac ctaggtaaac cggcacctta aactgggttg
    41881 ccacttggta aatcaaggtc ccgacacctg atgcgaagag ggcaaccgat acgggcatac
    41941 cgagaatcag cggcaccaaa atcgtcgcac caaacatagc gaacacatgc tggaaactca
    42001 acaaaatccc ttgaagcggt gctggtttct catggacatc aaacaaaaga ttggcttttg
    42061 tactcataaa tctcccattc tgggtacaca aaaagaccca gactttctaa atatacatag
    42121 tcataggccc ttaataattt ttcctgttgt ctttctcacc tcacgggatg agtttaaaaa
    42181 cctacgcttt tggtattgta acataagccc ttacttttgg caagagattt tttaattttt
    42241 gttctcttag gggaaatggc agagcgagga taagaactcc attgcttatt caagttcatc
    42301 taccagctct ttttccacct gcttctgacg gtacttattc gcccaagaga gaagattcgc
    42361 cagtaagaaa atgagacctg tgatagaaag aaagaatatc aaaatcacca ccccaaaatg
    42421 ccaatcccaa atgccagtat aatgctgtcc ataggtctgg tagttggtcc aagccattac
    42481 aatcgttgtc ccagcaatta ccactcctat gtaaaggtaa gcctgccaag tagttcctct
    42541 ttccatatca agccccttcc tccaataacc ataaaagaga tagactgaaa cgaccaacat
    42601 ggcaatcagt tcaaaaacat aggtatcaaa cggccatttt aataacagac ttttgatgag
    42661 aaatgagaga ggcaaaagaa tattcattgt cctgcccacc caggcaaaga cttggttttc
    42721 ttcttgttga acacgttcat cagtcacaat ttttttcatc agttggttcc tcccaaaata
    42781 attgatctaa actttttcct aagcagtggc aaatcgatag acaaagactt agactaggat
    42841 tgtatttccc tgcttcaatc agaccgatgg tctggcgggt cactccaata gcatctgcca
    42901 gatccccttg ggtcatatct ttttccacac gcgccaactt taaccgaaga tttttcatgc
    42961 catagccatc ctcctgtgca tttttataac cttattatac actatattct ccaatttgca
    43021 atatataaat tgcattttgt ttggtttttt tacaaaaaaa gaagacaata ttgccttcgt
    43081 aatatacgta catattcagg tattactctc cctactccac actcttaatc cgtttcttaa
    43141 tcttctggct aaactcaatc attctccgct tttcctccgg ccagattttg gtcacgcggt
    43201 caacagcaat tatgaagatg attaccgcag catagtcctt ggctttttca atcagaccaa
    43261 cactttcagc aactactaaa agtagataga atgtgaataa aatagttcgt ttgggtaacg
    43321 ccatcaaaaa ctcaatccct gccttatagc ccagataaat ctgccgatta agccctttgg
    43381 ccttttccaa acgacgattg agaaaggcac gaatccgctt gtaaaaccaa tccgaagtca
    43441 gaaaaagtga ttgggcacca attacaatca aagaaacatt attggcatgt tcttccttaa
    43501 gccctagcgc tctagtcaca acgtaggtcc aatcaccatt atcaatacag ataaaaatag
    43561 taaagtaaac aaccgctccc gctactataa caaggggaag ggcacggata tatttcaaca
    43621 tataataacc tctcttggac aaatcttaga acctatattc ataaacaaag tgttcttatg
    43681 caagaaatcg tttttgctca tcaaggcaat tttttgaagg aatacttgac tagtttcact
    43741 ttattgcttc gacgagtaaa aagctcctgt ggcagttttc gcctaccacc taatttgtca
    43801 ggaatctcct ttccttatct ccaccttcaa acactccaat ggaagcgatg aactgtgaac
    43861 acagggtctt atatatattg taatatgtta taccaagtac ggtcaagtag gggctagaat
    43921 ttcagatacg acaactgtac acccttagca ttttttactt accccaaaa
//
LOCUS       DBNFCX010000004        43177 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.004, whole genome shotgun sequence.
ACCESSION   DBNFCX010000004 DBNFCX010000000
VERSION     DBNFCX010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 43177)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 43177)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..43177
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.004"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..298)
                     /locus_tag="AC1PJC_000150"
     CDS             complement(<1..298)
                     /locus_tag="AC1PJC_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1310 family protein"
                     /protein_id="HIP6619203.1"
                     /translation="MKKVMKVIIGILLVIVIGIGGIGYMQHKEHEKMVAIATSEEARK
                     VYEDKIRREESVAFTNQGVIQTYKIDEASLEYNPMGGLMVDVFINDDREAYISFN"
     gene            complement(400..1626)
                     /locus_tag="AC1PJC_000151"
     CDS             complement(400..1626)
                     /locus_tag="AC1PJC_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mbeg1-like protein"
                     /protein_id="HIP6619204.1"
                     /translation="MYTEQERQRIAKEEYTDYVVGDPVKIFTNVKEELTIGTVRKVLK
                     DATGLDGYVVEEPDGNVTVLFQGSKGPGEEGSAADWLDNDLPMAHNIISNKSEVTPQL
                     QSASRTLNQVLKDYPNAQITVYGHSLGSMNAQYALATVSDIDRIAGAYIYNGPNVYPA
                     LTEEEKARVNALKYRIHNYIDQKDFVPIGYSGKNAPGYKSPAGTSEVAIGIVYRVDSK
                     TNLNPIDQHVWGGYQWNADGSLKVKEGSSKLEQHYSSALHHVSSEMYHYATLTATLSR
                     GGFSSRETIYLDSEQARILAQGLVKVAETTHQTLEKETTSTLTEVNEVYSSLGNVPFG
                     FILSPDEVRQAYSSAGVDYHSLVGDSTNQVEKFVTRSNQLKQDLVDLESQIQAGIEQK
                     VTEDQTLAQRIQEWTN"
     gene            complement(1628..2020)
                     /locus_tag="AC1PJC_000152"
     CDS             complement(1628..2020)
                     /locus_tag="AC1PJC_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1310 family protein"
                     /protein_id="HIP6619205.1"
                     /translation="MKIVVKILVGILIAIAIGIGGFKLMQKIEHDYMVEVVKSEEVRE
                     IIEERLISYDTRALTEEGAIRSYSIDSSSIRRNPMGGISFTVHVNNDSGLYVFYTINK
                     DSNTKKIVLEGGGNSSRFENLITKDTRE"
     gene            complement(2046..2309)
                     /locus_tag="AC1PJC_000153"
     CDS             complement(2046..2309)
                     /locus_tag="AC1PJC_000153"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619206.1"
                     /translation="MTEKYTDRDRQKIANKEYSAYKFRDEVNIGTLEHPRYIGTVRKV
                     LKDATGLDGYVIEEPDGNECCDGDGNTVSAASMLYYEVRKRLT"
     gene            complement(2302..2694)
                     /locus_tag="AC1PJC_000154"
     CDS             complement(2302..2694)
                     /locus_tag="AC1PJC_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1310 family protein"
                     /protein_id="HIP6619207.1"
                     /translation="MKKVMKIIIGILLVIGIGIGGIKLMQKIEHDQMVEIVKSEEVRE
                     IVEEQLKYLDNEALSEDGLIKTYEIDDSSIIHSPLGGISFNVFLNSDRKLRVVFELEK
                     DSNTGKIEYSGGGYSSEVKKLVGEINND"
     gene            complement(2860..5193)
                     /locus_tag="AC1PJC_000155"
     CDS             complement(2860..5193)
                     /locus_tag="AC1PJC_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009659728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0045910 - negative regulation of DNA
                     recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease MutS2"
                     /protein_id="HIP6619208.1"
                     /translation="MNNKIIETLEFHKVRQKIEPYLLTEQGFEELRQLEPMVEVHRIQ
                     QAFDELTDIAQIFVENPYFSLSATSDINPAMRRLELDTDLNISELLAVKKVLEVSKSL
                     LDFYGNLENVSLSQLDKLFEKIELFPHLQGSLQSINDAGFVEDFASEKLARIRRKIRE
                     AEDQVRQVMQDILKTKGDMLSDSILASRNGRNVLPVKNTYRNKIAGVVHDISASGSTV
                     YIEPRAVVTLNEEISHFRAEERHELNRILQELSDMLRPHSGVIRNNAWLIGHIDFVRA
                     KHLFARDHHAVVPKLSQKQDIALLNVRHPLIAKPVPNDLYFDSQLTAIVITGPNTGGK
                     TIMLKTLGLTHLMAQSGLPILADKGSRVAIFKEIFADIGDEQSIEQSLSTFSSHMTHT
                     VQILAEADQDSLILFDELGAGTDPQEGASLAMAILDDLRLRGIKTMATTHYPELKAYG
                     IETSGIENASMEFDTNSLRPTYKFMQGVPGRSNAFEIARRLGLSDIIIQSAQSWTDTD
                     SDVNRIIEKLENQTVESRRRLDKIREVEQENFKMNRALRKLYDELNRERENELNKARL
                     EAKEIVDMALAESEDILKNLHAAASLKPHQIIEAKAELKKLAPEVVDLSKNKVLKKAK
                     IQREAKVGDDIIVTAYGQRGTLTNQLKDGRWEAQVGLIKMTLAKDEFELVKAEKAEQP
                     KKRQVHTVKRANVRGPKARLDLRGKRYEEAMMELDEFIDQALLNNLAQVDIVHGIGTG
                     VIREGVTKYLRRNKQVKEFGYAPQNAGGSGCTIVTFK"
     gene            complement(5355..5903)
                     /locus_tag="AC1PJC_000156"
     CDS             complement(5355..5903)
                     /locus_tag="AC1PJC_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HIP6619209.1"
                     /translation="MISLAIILILAWSFYIGYSRGLVLQAFYSMGSIIALVVATATYK
                     KLASFLYLWVPFANATQGSSNYYFDEKYLFDLDMVFYAGLAFLLIYVLVYAIVRFIGI
                     FVHLLEAFNPDTKTTNLISGALAVLVTFISLQIVMVLLSTIPLAMIQDKLHSSFLANI
                     MIQYTPFTSSFLKSLWLSNIAG"
     gene            complement(5900..6211)
                     /locus_tag="AC1PJC_000157"
     CDS             complement(5900..6211)
                     /locus_tag="AC1PJC_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619210.1"
                     /translation="MANLNRYKFTFGEKQLTLTTEHDNLFMEEIERIAQEKYQAIKEK
                     MPTADPETLALLLAINALSVQLTREMVFEQKEQELASVKEKVLKKNVTLIDLDELEDK
                     V"
     gene            complement(6269..6982)
                     /gene="treR"
                     /locus_tag="AC1PJC_000158"
     CDS             complement(6269..6982)
                     /gene="treR"
                     /locus_tag="AC1PJC_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose operon repressor"
                     /protein_id="HIP6619211.1"
                     /translation="MKKYQEIYNDLKEKIRTNVYPAESSLPTEQQLQEIYGVSRDTVR
                     KALAILTEGGLIQKVQGRGSMVLKQEILNFPVSGLTSYQELTNVLQLSTKTDVVSLDM
                     ITVNSSLSHLTGFEPYSKVWKVVRTRSIDGKVSVVDTDYLAVDVVPELTTAIAEKSIY
                     EYLENKLGLDIAYAQKEITVEPTNREERELMQSKDDYLVLIKSRVYLGDTQQFQYTES
                     KHKIDKFRFVDFARRKHSL"
     gene            7216..9210
                     /gene="treP"
                     /locus_tag="AC1PJC_000159"
     CDS             7216..9210
                     /gene="treP"
                     /locus_tag="AC1PJC_000159"
                     /EC_number="2.7.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_function: GO:0015574 - trehalose transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0015771 - trehalose transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system trehalose-specific EIIBC component"
                     /protein_id="HIP6619212.1"
                     /translation="MGKFEKEAKQLLEAIGGKENVNAVTHCATRMRFVLADEKKANVK
                     VIEDIPAVKGTFTNAGQFQVIIGNDVPIFYNDFTAVSGIEGVSKEAAKSAAKSNQNAI
                     QRVMTMLAEIFTPIIPALIVGGLILGFRNVLEGVQMEWLGQAMKDGQLVFDADGNPVW
                     NTIVQVSPFWNGVNHFLWLPGEAIFHFLPVGITWSVSRKMGTSQILGIVLGICLVSPQ
                     LLNAYAVPGTDAATIASDWSWNFGAFSIARIGYQAQVIPALLAGLALSYLEIFWRKVV
                     PEVVSMIFVPFLSLLPAIILAHTVLGPIGWTIGQWLSTVVLAGLTGPLKWLFGAVFGA
                     LYAPFVITGLHHMTNAIDTQLIADAGGTGLWPMIALSNIAQGSAVFAYFLMNRHNEKE
                     AQVSLPATISAYLGVTEPALFGVNVKYIYPFVAAMIGSSIAGILSVTFNIQAASIGIG
                     GLPGILSIKAEYLGAFFMTMIVAIVVPMILTAVFKRTGAFSKKEETVEEVVTPTEAVV
                     EAGAAIELISPLTGQTKELSQATDPVFASGVMGQGVLIDPTEGLLVAPVDGEISVLFP
                     TNHAVGITATNGVELLMHIGMDTVGLEGKGFTAHIKQGDKVKAGDKLISFDIDVIKAA
                     GLIAETPVIVTNQTDFDTQVIGNLPRAISQGEAILTVTKN"
     gene            9291..10916
                     /gene="treC"
                     /locus_tag="AC1PJC_000160"
     CDS             9291..10916
                     /gene="treC"
                     /locus_tag="AC1PJC_000160"
                     /EC_number="3.2.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008788 - alpha,alpha-phosphotrehalase
                     activity [Evidence IEA];
                     GO_process: GO:0005991 - trehalose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-phosphotrehalase"
                     /protein_id="HIP6619213.1"
                     /translation="MTIDKRKVVYQIYPKSYKDTTGNGVGDLRGIIEKLPYLKELGID
                     VIWLNPFYPSPQRDNGYDISDYTAVNPDFGTMADFEEMVAVGKELSIEFMLDMVLNHC
                     STDHEWFQKALAGDKYYQDFFILRDQPTDWVSKFGGNAWAPFGDTGKYYLHLFDVTQA
                     DLNWRNPHVREELFKVVNFWKDKGVKGFRFDVINLIGKDEVLEDCPINDGKPAYTDRP
                     ITHDYLKMMNNATFGSEKGFMTVGEMSATTIENCILYTAPEREELSMAFNFHHLKVDY
                     KDGQKWTIMDFDFEELKHLFHTWGEEMSVGNGWNALFYNNHDQPRALNRFVDVENFRN
                     EGATMLAASIHLSRGTPYIYMGEEIGMIDPDYDSMDDYVDVESINAYQMLLDQGHTPK
                     QAFKIIQAKSRDNSRTPMQWDASDNAGFSTGTPWLKAGKSYQTINVEQEKTGPIFTFY
                     QELIRLRKELPLISEGDYKAAYKDSQKVYAFERLLNGEKLLVLNNFFAEEVELDLADD
                     YAHGQVLISNYPDNKLGKKIILKPYQALAIQVK"
     gene            complement(11319..12482)
                     /locus_tag="AC1PJC_000161"
     CDS             complement(11319..12482)
                     /locus_tag="AC1PJC_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HIP6619214.1"
                     /translation="MKNNKKMLYTSSLALSLFSTGMISTNVLAIEWAPRTVSEISPEI
                     VQEEGRMTYTVQYGDTLSAIASAMNIDMDLLAKINQIADVNLIFPDTVLTTTVDQNNQ
                     VTQVEIEAPVQGNTNETVQATVDLTTNQVTVEDTVVPLDQISSVTDSAPVEEVVERPV
                     EEVVEQPVVEAPVEEVVEQPVVEAPVEEVVEQPVVEAPVEEVVEQPVAEAPVEEIVEQ
                     PVVEAPIEEVVEQPVAEAPVEEVVEQPVVEAPVEQPVVETPQVTALSTTTTSTSAYDV
                     GLQPQVAAFRAEVANAFGITSFSGYRPGDSGDHGKGLAIDFMVPESSALGDQVAAYAV
                     ANLASKNINYIIWKQRFYAPYDSIYGPAYTWNLMPDRGSITENHYDHVHVSFN"
     gene            complement(12892..13875)
                     /locus_tag="AC1PJC_000162"
     CDS             complement(12892..13875)
                     /locus_tag="AC1PJC_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family protein"
                     /protein_id="HIP6619215.1"
                     /translation="MEVQMKYKWATLGTGVIANELVQALQDMGGNLYSVANRTYDKGV
                     EFAQKYGIEKVYREIDEVFEDPEVDIIYISTPHNTHINYLRKALKAGKHVLCEKSITL
                     NSEELAEAIQLAEENQVVLAEAMTIFHMPIYRQLSEVVASGKLGDLKMIQMNFGSYKE
                     YDMTNRFFNKNLAGGALLDIGVYALSFVRWFMTEKPNQVLSQVKLAPTGVDEQVGILL
                     SNDAGEMATIALTLHAKQPKRGTIAYDKGYIELYEYPRGQKAVITYTEDGSQEVIEAG
                     DTAKALSYEVADMEKAVAGIENTMHLAFTQDVMEIMTQLRKEWGLVYPEEM"
     gene            13960..14850
                     /gene="rnhC"
                     /locus_tag="AC1PJC_000163"
     CDS             13960..14850
                     /gene="rnhC"
                     /locus_tag="AC1PJC_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HIII"
                     /protein_id="HIP6619216.1"
                     /translation="MNTVVLKTSAQQKQAMMAHYDRYRQTSKNPYIEAFFKLTGASLS
                     IYTSGKVVFQGEMAEQEAGLWGYEPESSGQTTIPGQNLPMIGTDEVGNGSYFGGLAVV
                     ASFVRPEDHAFLKSLGVDDSKKMTDQKICQIAPLLKEKIPHQALLLSPKKYNEVIEQG
                     YNAVSVKVALHNQAIFLLLQKGVQPEKIVIDAFTSSQNYQKYLKKEANQFANPVTLEE
                     KAEGKYLAVAVSSIIARAMFLENLVQLGQLVGMNLPSGAGSKSDQVAASILKQYGMAG
                     LNQTAKLHFANTQKAQKLLK"
     gene            14860..15489
                     /gene="lepB"
                     /locus_tag="AC1PJC_000164"
     CDS             14860..15489
                     /gene="lepB"
                     /locus_tag="AC1PJC_000164"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HIP6619217.1"
                     /translation="MGAIQKTKRSPLVAFLAEWGIFLLFMAAFFASRYFIWNPVSVDG
                     HSMDPTLQHQEKLIMLKTTSIDRFDIVVASETDSDGKEKLIVKRVIGMPGDTIRYEND
                     VLYVNDQKVDEPYLDEYLAAFQKDKLQEVYSYNKQFQAVAQSAEAFTQDANGYVDFTV
                     TVPEGQYYLMGDDRLVSLDSRSVGTFSRENIKGEVVFRMWPLNRIGTVD"
     gene            15860..18349
                     /gene="recD2"
                     /locus_tag="AC1PJC_000165"
     CDS             15860..18349
                     /gene="recD2"
                     /locus_tag="AC1PJC_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0043139 - 5'-3' DNA helicase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SF1B family DNA helicase RecD2"
                     /protein_id="HIP6619218.1"
                     /translation="MNEVYVTGTIDRIIFENPSNFYKILLLEIEETDADYDDYEIIVT
                     GTIADVIEGEDYRFYGNLVTHPKYGQQLQISRYERSKPTSAGLVKYFSSEHFKGIGRK
                     TAEKIVELYGEDTIDKILAEPEKLTQISGLSSKNMQAFVEKLRLNYGTELILAKLAEY
                     GIPNKLAFQIQDQYKEKTLQIIEENPYQLVEDVQGLGFTIADRIAENLGIASDSPQRF
                     RAGMLFSLIHRSMETGDTYVEARDLLEATLELLEKSRHTELDPAAVAKELTGLIADDK
                     VQQEGTKIFDNSLYFAEQGIHTNLTRLMGKNGFKPFPRADVEAAIAELETMSSLTYDD
                     IQKEAIVQAITNPLFILTGGPGTGKTTVINGIIAVYAILHKIDLTRNREEYPVLLAAP
                     TGRAARRMNELTGLPSATIHRHLGLVEGQEESYRDDYLEADFIIVDEFSMVDTWLANQ
                     LFQNISSQTQVLIVGDAEQLPSVSPGQVLADLLKIDKLPSITLERIYRQSDDSTIVTL
                     ASQIRQGALPSDFRDKKADRSYFEAQNEQIPALIERIVGAAIKSGIPANEVQILAPMY
                     RGAAGIDQLNTMTQALLNPLEEGELEFLHNEQAFRQGDRVIHLVNDAEANVFNGDLGY
                     ITDLLPAKYTDSKQDEITINFDGSEVTYPRNEWYKITLAYAMSIHKSQGSEFQVVILP
                     ITRTSHRMLQRNLVYTAITRSKSKLILLGEISAFDYAVKNAGTVRKTYLVPRFQGEIA
                     EQDSKEALTEKDESKTATTTQTQLPTQPDRKELVKVVKENNQQLSLLDQDQPEKTSPQ
                     PTEYILTVDNLLTIDPMIGIEQADIEEFFKV"
     gene            18500..19584
                     /locus_tag="AC1PJC_000166"
                     /pseudo
     CDS             18500..19584
                     /locus_tag="AC1PJC_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636526.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            complement(20093..20733)
                     /locus_tag="AC1PJC_000167"
                     /pseudo
     CDS             complement(20093..20733)
                     /locus_tag="AC1PJC_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935979.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III domain-containing protein"
     gene            complement(20781..21701)
                     /locus_tag="AC1PJC_000168"
     CDS             complement(20781..21701)
                     /locus_tag="AC1PJC_000168"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008443 - phosphofructokinase activity
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase family hexose kinase"
                     /protein_id="HIP6619219.1"
                     /translation="MIHLICPNPALDRTLLVEKIEKNIPLRPTEVRDYPGGKSFNVAY
                     ALRENGVTDYTIHTVLGGQIGRYIQDLNVQKGNQLQAVENDQNTRTCNIYVETSTGDV
                     VLFYEKGFELTEDLLNQFTQQIENSLQAGDILVFSGSLMKGMPDDYIQRFIEKYPEVL
                     TIVDTSGPALRAAYQARPALIKINNEELKDIYPELDEESPEAILGILKEVTPHENIII
                     TMGDKGSLAKIGQRFFRIQSPKKETRNPIAAGDFYLGLLVKGISQGQAPEIFLKEAAA
                     FATANCLNYFPEVEAEQFEEIVDTILLEEL"
     gene            complement(21806..22432)
                     /locus_tag="AC1PJC_000169"
     CDS             complement(21806..22432)
                     /locus_tag="AC1PJC_000169"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HIP6619220.1"
                     /translation="MKIAIIAANGQAGQTIAKEAVERGHQVTAIVRSENKSVAQEVIQ
                     KDAFALTQEDLAGFDVVVNAFGAWTPETLPDHARLAEHLATILVGSPTRLLVVGGAGS
                     LYLDESQTSMLKDTPDFPADYLPVAEAMGAGLDIYRQATAVNWTYISPAADFDAEGQK
                     AGAYTLAGEVFQVNAQGESYISYADYAVALVDIAEKGGYQQERISVLA"
     gene            complement(22671..23090)
                     /locus_tag="AC1PJC_000170"
     CDS             complement(22671..23090)
                     /locus_tag="AC1PJC_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HIP6619221.1"
                     /translation="MQISSRFTIASHILVLLALEGEKEKQTSTSIAGSVGVNPVIIRN
                     ILSQLKEAGLVEVARGVGGARLAQGPDQITLLHVYQAVELFGEKGQLFAFHEQPNPSC
                     QVGRNIHPLLDSRLENAQSAMENELAKTRLADLLAEL"
     gene            complement(23133..24200)
                     /gene="dinB"
                     /locus_tag="AC1PJC_000171"
     CDS             complement(23133..24200)
                     /gene="dinB"
                     /locus_tag="AC1PJC_000171"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HIP6619222.1"
                     /translation="MLIFPLINDLSRKIIHVDMDAFFAAIEVRDNPALKGKPVIIGAD
                     PRLSGGRGVVSTCNYEARAFGIHSAMSSKEAYERCPQAIFISGNYEKYQEVGRQVREI
                     FHRYTDLVEPMSIDEAYLDVTENKLGISSAVKIAKLIQYDIWNELHLTASAGVSYNKF
                     LAKIASDMEKPHGLTLILPEDAVGILASLPVEKFHGVGKKTVERLHEMGVYTGQDLLD
                     VPEMVLIDRFGRFGFDLYRKARGISNSPVKVDRVRKSIGKERTYRKLLYREEDVLKEL
                     ISLCQRVAVSLKRNGKRGRTIVLKVRYGDFSTLTKRHSLEVYTDQTETIEKEVRQLIE
                     EIGKIEKGIRLLGVTVTNFQT"
     gene            24516..26861
                     /gene="pflB"
                     /locus_tag="AC1PJC_000172"
     CDS             24516..26861
                     /gene="pflB"
                     /locus_tag="AC1PJC_000172"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008861 - formate C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HIP6619223.1"
                     /translation="MSTKVKTKNVAEDIFAQAWEGFKGTDWQDKASVTRFVQANYTPY
                     DGDESFLAGPTERSLHIKKIIEETKAGYEDTRFPMDVDRATSIADIPAGFIDKENELI
                     FGIQNDELFKLNFMPRGGIRMAETTLIENGYTPDPLLHEIYTKHATTVNDGIFRAYTA
                     DIRRARHSHHVSGLPDAYSRGRIIGMYARLALYGADYLMEEKVADWNAITEIDEESIR
                     LREEINLQYQALQQVVRLGDLYGVDVRKPAMNTKEAIQWTNIAFMAVCRVINGAATSL
                     GRVPIVLDIYAERDLARGTFTESEIQEFVDDFVLKLRTVKFARTKAFDEIYSGDPTFL
                     TTSMAGMGNDGRHRVTKMDYRFLNTLDNIGNSPEPNLTVLWSDQLPYSFRRYCMAMSH
                     KHSSIQYEGVTTMAKDGYGEMSCISCCVSPLDPESEDQRHNIQYFGARVNVLKALLSS
                     WNNGYDDVHKDYKVFDGVEPNTSEIFDYDQVIANFEKALDWLTDTYVDAMNIIHYMTD
                     KYNYEAVQMAFLPTHLRANMGFGICGFANTVDSLSAIKYAQVKPIRDEDGFIYDYEVT
                     GDFPRYGEDDDRVDDIAKWLMEAFFSRLNKHKLYKNAEATVSILTITSNVAYSKQTAN
                     SPVHRGVFLNEDGSVNTSKVEFFPPGANPTSKSRGGWLQNLNTLSKLNFKHANDGISL
                     TTQVSPKALGKTFDEQVNNLVTILDGYFEQGGQHVNLNVMDLNDVYDKIMAGEDVIVR
                     ISGYCVNTKYLTKEQKTELTQRVFHEVLSMDDHAAEVSGQA"
     gene            complement(27024..29993)
                     /locus_tag="AC1PJC_000173"
     CDS             complement(27024..29993)
                     /locus_tag="AC1PJC_000173"
                     /EC_number="3.1.21.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009035 - type I site-specific
                     deoxyribonuclease activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HIP6619224.1"
                     /translation="MAHFDLTERYDFQQWILTDLETENGFTHRPQSNYNQRLAMDTDI
                     LWEFLRATQEDEMGYLLKKLDKEVILNLINQEIIKGGLLFALKSGVYIENKQLKLVYP
                     KPATSFNAKAVKRYEQNRFTVMEEVVYKDKERVDLIIFLNGLAIFAIELKLNSSGQSV
                     DDAIRQLKKRDSKNRLFKFDSGVLASFAVDTLEVYMTTEIKGQDTYFLPFNMGNGEGV
                     DQGAGNPHNESGPDTAYFWQEVLTKDSILQLIEHFIFLKVDKDNKNKKTLIFPRYQQR
                     RAVNRVLEDMKVNHTDSNYLIQHSAGSGKTNTIAWLAHSLVSLHDHEDRNVVDAVLIV
                     TDRIVVDRQLQDAVQAIQHQPGVIKVMDDKATSSDLADALAGNTKIIATTIHKFAQIN
                     KSDWMTAGPTAQKRFAILIDEAHSSTTGSYMSAVSQVLTETDVEDGTIDEVQEVSVAD
                     AIEQEIARTGKQDNISIIAFTATPKATTLQLFGKTLPDGSKGPFDVYSMKQAIQEDFI
                     LDVLNNYTTYKTYYKLNKAVEEDPQFKTGLAKRKIAKFIELSDENIDQKVEIIMDHFI
                     SHDIMAELGGQGKAMIVTSGREAAVKYQKSFKRYFKKHHITSIGALVAFSGKVSMDDQ
                     DYTEALMNGIAEDKLKERFDTDDYQVLIVANKYQTGFDQPKLVAMYVDKKLRDVAAVQ
                     TLSRLNRIVGGYNKKTFVLDFKNTYEDINKAFAPYYKETILAETITPSDVFDLVRKID
                     EYGILDSDVIHEFNQFLYQEKRSSRDKQKMTALLNKGYSRVQEFDEKEQLEIKKVFRG
                     FLRMYTFLIQATAYQNEVLHERYNYIQALVKEIDVTLGGTDFTIADKIVVDYMKHKQT
                     GVHTVADLEGEYTLSLNKPKIGPIDEEQEKRLSEIIDEINEQLDLTIDPQIGVSGAVS
                     IRELMKKNEKLKQSAKVNSREDFEFSFEDEIDNALTEGYMQNQDFFGVLLNNDDFKKR
                     IAKLFIDDVYRSLKDDK"
     gene            complement(30019..30252)
                     /locus_tag="AC1PJC_000174"
                     /pseudo
     CDS             complement(30019..30252)
                     /locus_tag="AC1PJC_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002905004.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cell filamentation protein Fic"
     gene            30570..30689
                     /locus_tag="AC1PJC_000175"
                     /pseudo
     CDS             30570..30689
                     /locus_tag="AC1PJC_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003049409.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="putative holin-like toxin"
     gene            complement(31086..32360)
                     /locus_tag="AC1PJC_000176"
     CDS             complement(31086..32360)
                     /locus_tag="AC1PJC_000176"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HIP6619225.1"
                     /translation="MTRMKDSGIEWIGEVPEEWGIKPIKHIFGAIGSGTTPDSSKVEY
                     YDGNINWLQSGDLYKKDYVYAVSKTITDLGYRSSASLRIYQAPFLAIAMYGASIGNLA
                     ISKIDACVNQAVAVLKGEENIVRFTKLALEISKTELIFAAQGGTQPNINQVLIKNWVI
                     PFPSEIEIKKIADFLDKKVAQLDKVKSLLEEQIKTLEDYRQSLIYETVTRGLDKTVPL
                     KDSGVDWIGQIPEGWNVDRLGFHIYEINEKNIPQKSDFILSLTNKDGVIPYEDKGNQG
                     NNSKDNLLDYKLAYPDTIVANSMNILIGSVGYSNYFGCISPVYYVFKERLGTNLKFVN
                     YIMATQLFQKELRKYANGILEIRLRVSSEDILKRFCAFPSLSDQDKIVSYLDKRTNQI
                     NQMIAIKKEQIENINKQRQTLIYDYVTGKRRV"
     gene            complement(32353..34452)
                     /locus_tag="AC1PJC_000177"
     CDS             complement(32353..34452)
                     /locus_tag="AC1PJC_000177"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016398856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HIP6619226.1"
                     /translation="MPIKAPFSVQKRPIHISKDVNLVWSIANTLRGAYRADKYRDVII
                     PMFVLARLEAALLPTKEKVLAQFQSNPSTPEKIFESLTGYKYYNTSKHTLKNLLNEPD
                     AIKDNFLDYLDGYSKRVKDIIENLKFKEQVDTLASTGRLFTVVKKFSELDLSPSSIDS
                     MRMGYMFEDIIRRFSENEEAGSHYTPREVIALMVNLLLMEADEELFVDNKEIKVLDMA
                     AGTGGMLATAKSYIQQLNPKVNVRLFGQEYLAETYGIGKADMLIRQEESDYFVKTDTL
                     KDSDPFHDKKMNFVIANPPFGQSWGGKDADDGVEQAVKADQALFESTEGREGRFVNTP
                     TTGDAQLLFHLHALAKLEENGRAAIISNGSPLFSGGTTSGESQIRRYILENDLLEAII
                     ALPGQFFYNTGIGIYIWLYNKDKSPERQGRVQFIDATNEFVPLRKSLGQKRRELSQDN
                     IKDILKWYHDFEENDRVKIFDSKEFLYKEYLVMQPLQRRGEITEKSLESVQSVQFFAK
                     LFDEYKYQELLEMEPRTAKQDKELQKLEEGREKQEEILQALRQGLSEATYPNFETFTA
                     TLKELLSEVKLTPANLNALALAMSEMDKTAEVITTKKKDKLGEIADGIVYDKTTKDSE
                     IVKLSEEVEVYFEREVYPHVPDAHFWWEESKLGAEIPFTRYFYQYQAPEKAEDLLKQF
                     YDLEDQLQALLEDLKHD"
     gene            34408..35208
                     /locus_tag="AC1PJC_000178"
     CDS             34408..35208
                     /locus_tag="AC1PJC_000178"
                     /EC_number="3.-.-.-"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015445104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HIP6619227.1"
                     /translation="MDGTFLDGEGSFDRQRFAAILAQLAERKIPFVIASGNGIERLLQ
                     LCQGFENRLIFVADNGAHVYQNGKTVIRRAIQQVEVEAILHFFKGRWADVCLMLSNEE
                     NIYMQAGAGMPFAGTDLPIEPAQMAAFQNRVTYLDDLSAYPISELIYKVGIWVPEASV
                     ESITEEFNQAFQGRLTAVTSGYGSIDILPEGIHKAWGLEQVLTSLDIEPEQVMAFGDS
                     DNDIELLSYAGHSYAMENATDKVKAVAKYMAPSHLGAGVLQVIEEYIL"
     gene            complement(35257..36039)
                     /locus_tag="AC1PJC_000179"
     CDS             complement(35257..36039)
                     /locus_tag="AC1PJC_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIP6619228.1"
                     /translation="MKKYISLYLYNIKVYMMAQMSFRVDFFIGLFSSLIEQIVYLIFL
                     NILFGNIKEIAGFNYGQMLFIYGIATVGRSIHLIFFDNLWMFGSRYIRQGEFERLLLM
                     PVNPLFQLICERIQPQGIGTTLIGTLALAQASKELGMEWSLGKLALLIFIAICIGLLY
                     AAIQLGPTALAFWIVESFPLTMGIFALNQMAQYPLNIYPKLIQILLIFVFPYAFTAYF
                     PALYFLDLSMWGLALPLVVLVLFTINYKLFRYGMTKFTSVGN"
     gene            complement(36041..36820)
                     /locus_tag="AC1PJC_000180"
     CDS             complement(36041..36820)
                     /locus_tag="AC1PJC_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIP6619229.1"
                     /translation="MRKYLYMTRLTMMNAMQYKAFFLATFVSLAVKILVALYVWKTIF
                     FTQSEVNGFTLQTFTTYIIFANLLASLNSFSLGEDLSYSILKGSIAGEFLRPYSFILA
                     LFFKDLGNKLLELIKFAIVFIGIILVHQDFYLPDGKTILLFLVSSILGMFIVQLLDMA
                     FGFLAFFTVNAWGVMLLRMGLFNLASGALLPLSFYPQAVENFLKLLPYNYAVNVPVSI
                     LLGQESDLTALGLQVIWIPILACFIAALWSQAKRRIVIFGG"
     gene            complement(36813..37796)
                     /locus_tag="AC1PJC_000181"
     CDS             complement(36813..37796)
                     /locus_tag="AC1PJC_000181"
                     /EC_number="7.5.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6619230.1"
                     /translation="MIQAEHLSKTYSIIDKEVGLKGSIKAFFKPKKKSIPAVQDISLQ
                     VGKGEIIGYIGSNGSGKSTTIKMLTGVLYPDQGQVRINGLNPQENRKAVNKQIGVLFG
                     QKSHLDWNLPVQESFILHAKIYDVPDKVFKERLAVLIELLDLADIMKQPIRNLSLGQR
                     VRCEFAAIFIHQPAVVFLDEPTIGLDASVKETIRSFIRYMNQEYQTTFLITSHDMKDI
                     ESLCERIFIIDKGKKVYDGSLTVLKERFSTVKTILFSTEKPIEKDLQLEGWEFIRKDD
                     FHFEIHYQSKVWTSAQVIEQVFNHYAIEDVTMKELEIETMVRQIYEEGIHA"
     gene            complement(37881..38414)
                     /locus_tag="AC1PJC_000182"
     CDS             complement(37881..38414)
                     /locus_tag="AC1PJC_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HIP6619231.1"
                     /translation="MGTDNRKERTRQAILEAMVTCLESQGFNDITTTHLAQTAGISRS
                     SFYTHYKDKYELIDSYQQGLFHKLEAIFDRYDGNRQSSFLEIFELLYREKLLSALLTH
                     NGTQEIQNFLINKVRLLVANDLAERLGKENLSQLEKEYSSIYFSHAFFGIMQVWIKNG
                     KQESPRYMTDFLIKMLP"
     gene            38540..40999
                     /locus_tag="AC1PJC_000183"
     CDS             38540..40999
                     /locus_tag="AC1PJC_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhgE/Pip family protein"
                     /protein_id="HIP6619232.1"
                     /translation="MLQKVKNIFKKPMTLITILGIACVPALYNISFLTSMWDPYGRLD
                     QLPVAVINQDQSASFQDKTLTIGDDMVDNMKESKSLDFYFVSEKDAEKGLEEGDYYMV
                     ITLPEDLSEKASSLLTNQPEPITISYQTSKGHSFVASKMGESAMEKLKISVSEAITET
                     YTTAVFDSMREIQTGMVEAADGSQQLTNGASQLESGSQTLSNGLTTLTTSGQVLVTGA
                     NQLATGVVFYTDGVNQAATGSQTLFSGLTTYTNGVASLASGAEQLNANSSQLIAGVGQ
                     LQSGASQVEQLVTGANQLQAGLEQLASSTSLSAEQSSQIQALLTGLPQLQAAINQLND
                     SLSSIGGLAVDNSTLSSLLTEMGAQAQGLLTAAQADKTASIEALQTTATYQNLPADQQ
                     AELVGALQNSPSTTATAAQTILDQLSQLSQTLSSLQSLSGMATQISQLQSAVGQINTA
                     ANQALPGATTAIETLSSGLNQVNTALNQQVLPGTQTLTSGVGQLQMQLSGGASQLMSG
                     VTAYTAGVAQLAAGGAQLVANNSSIQSGGGQLTSGLATLASNSSQLVSGSGQLASGSQ
                     QLIAGADQLASGGKTLTSGITSLRTGSETLTNSLSSASQQLSVVSVEDKNAQAVSQPV
                     TLEHSDQDDVKTNGVGMAPYMVSVALMVAALSANVIFVKHIDNRSYKNRWDWAKGKLL
                     LNGIIASLAAVILYGVLRLIGIEPAHPMATLGLILLASWAFMALVTALVGWNNRFGSF
                     ASLIILLLQLGSSAGTYPIELSPRFFRVIQPYLPMTYSVSGLRQTISMVGNSSHQVWI
                     LSLFLVGFMGLGLLIYNQKDE"
     gene            complement(41049..42107)
                     /locus_tag="AC1PJC_000184"
     CDS             complement(41049..42107)
                     /locus_tag="AC1PJC_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HIP6619233.1"
                     /translation="MKKKLTIAIIIGFVSLIAGLILAGIGFFTGGITRLEEVAAPTEV
                     HKTFTDLNTIKIDFIPHSVYIKESSDNNYHVTYANSDNNIQNPLKLSEKDGVLTLSAQ
                     ELEFAIEGIMQYLGESLAQRRINVFSVTIEVPKGKTLDKLEGHNLHFYNFGGFTIENI
                     HIKEANLSGGVTLDKVTIDSGQIEAGYFQATQSTLKDMHINLQGSSVRLYETSLENVT
                     IESYSQLDSRQTTLLGDNHFTPSDTYSSTTFLDVTDKSLADSNLLITNQIDKKKLVEA
                     QGYYYEDGNDLGEMVNQDPYLKERLGEVGIFTSDKYTKFPVKTENDLQTLTLENKGSK
                     NKLTIEATNATINLGTPK"
     gene            complement(42104..42859)
                     /locus_tag="AC1PJC_000185"
     CDS             complement(42104..42859)
                     /locus_tag="AC1PJC_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1700 domain-containing protein"
                     /protein_id="HIP6619234.1"
                     /translation="MTRTEYMEQLEKHLKKLPHKEYFEAISFFNEYFDEAGPEHETEI
                     IEELGSPKEAASELINNMLNKQIQEEKDQQEPIQLNWKLWVGLGTLSMTGLFSFFLLF
                     IMGEFIGVIPLFATLILGAFFLGRYFRNFSQTKRTLWLAILAVISLPIAIPLLLILLA
                     SLLGLVALILALIVGAFVLGVGLLTSGGYLIWEAFSLMSEGFNIFLMGFGSGLSLIGG
                     AILIYILTGFFAYWSWRLVKACFKWILKRGKRA"
     gene            complement(42846..43172)
                     /locus_tag="AC1PJC_000186"
     CDS             complement(42846..43172)
                     /locus_tag="AC1PJC_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HIP6619235.1"
                     /translation="MHFPVPAVLTEFLIMAILESDDSYGYEICQTIKLIANIKESALY
                     PILKRLEQNDFLTTYSQEYQGRMRKYYSLTQLGHEELVRLKDDWDTYTNTINGIIEGS
                     VRHDKN"
BASE COUNT        12295 a         9796 c         8661 g        12425 t
ORIGIN      
        1 aattaaaact aatatatgct tctctatcgt catttataaa tacgtcaacc ataagtcctc
       61 ccattggatt atattctaaa ctagcctcat caattttata agtttgaatg actccttgat
      121 tagtaaaggc aactgactcc tctcttctaa ttttatcttc ataaaccttc ctcgcctcct
      181 cgctagtagc gatagcgacc attttctcat gttccttgtg ttgcatatat ccaattcctc
      241 ctattccaat cacgattact aacaaaatgc cgataataac tttcattact tttttcatcc
      301 tagacctcct ttatgaaatc ctatcaagta agacgctttc ttacctcata gtataacata
      361 aatttagtgg tttaaatata taagaagagg ctacaagttt caattggtcc attcttgtat
      421 cctctgtgct aatgtctggt cttccgttac tttctgctcg atccctgctt gtatctgact
      481 ttctaagtcc actaaatcct gcttgagttg attggagcga gtgacaaact tctcgacttg
      541 attggtgcta tctcctacca gactatgata gtcaacacct gcactgctgt aggcctgtct
      601 cacttcatca ggactcaaaa tgaagccaaa agggacattt cctaagctac tgtagacttc
      661 atttacttct gtaagggtgg aagtggtctc tttttcgagt gtttggtgag tggtttccgc
      721 aaccttaacc agtccttgag ccaggatgcg ggcttgttcg ctgtccagat agatggtttc
      781 acgcgaactg aagccaccac gggatagggt tgctgttaaa gtagcatagt ggtacatttc
      841 cgacgagaca tggtggagag cactggaata atgttgttct agttttgaag aaccttcctt
      901 tacttttagg ctgccgtcgg cgttccattg ataaccaccc cacacgtgtt gatcaatagg
      961 attgagatta gtcttgctgt ccacacgata gactatgccg attgccacct cactcgttcc
     1021 tgcaggtgat ttatagccgg gagcattttt ccctgaatag ccaataggaa cgaaatcctt
     1081 ttgatcaatg taattatgaa tacggtattt cagagcattc actctggctt tttcttcttc
     1141 cgtcaaagca ggataaacat ttgggccgtt atagatataa gccccagcaa tgcggtcaat
     1201 atctgaaaca gtggccagag catattgagc attcattgag cctaacgagt gaccgtagac
     1261 tgtaatttga gcattagggt agtccttcag gacctggttc agagttctgg aagcagactg
     1321 aagttggggc gtcacttctg acttattaga tataatattg tgcgccatcg gcaaatcatt
     1381 atccagccaa tctgctgcag acccttcctc ccccggacct ttggagcctt ggaataagac
     1441 cgtcacattg ccgtcaggct cttcaacaac ataaccatcc aaacctgttg catctttgag
     1501 taccttacgg actgtgccga tggttagttc ttctttgaca ttggtaaaaa tcttaacagg
     1561 gtcgccaact acataatctg tatactcctc cttagctatt ctttgtctct cttgttcagt
     1621 gtacatatta ttccctcgta tcttttgtta ttagattctc aaacctagag gaattccctc
     1681 caccttcaag cactattttt tttgtattag aatctttatt aattgtataa aaaacataca
     1741 gtccactatc attattaacg tgaaccgtaa agctaattcc tcccattgga ttacggcgaa
     1801 ttgaggaact atctatagag taggacctta ttgctccctc ttcagttaac gctcttgtat
     1861 cataagaaat taacctttct tcgataatct ccctcacttc ctcactcttc acaacctcta
     1921 ccatataatc gtgctcgatt ttttgcatca gcttaaatcc tcctattcct attgcgatgg
     1981 caattaagat gccaacaagt attttaacaa ctattttcat tccaaacctc ctttatgaaa
     2041 tcctatcaag taagacgctt tcttacctca tagtataaca tagatgcagc tgaaactgtg
     2101 ttaccgtcac cgtcacaaca ctcgttgcca tctggctcct caatcacata gccatccaaa
     2161 cctgttgcat ctttgagtac cttacggact gtgccgatgt atctagggtg ttctagggtc
     2221 ccgatattta cctcatctct aaatttgtaa gctgaatact ctttgttggc aattttctgt
     2281 cgatcacgat cagtatactt ttcagtcatt gtttatttct ccaactaatt ttttcacttc
     2341 agaagaatac cctcccccgg agtattcaat ttttcctgta ttagaatcct tttctaattc
     2401 gaacaccact cttaactttc tatctgaatt caagaaaaca ttaaaactta tccctcccag
     2461 cggactatga atgatagaag aatcatcgat ttcatatgtt tttatcagcc catcctctga
     2521 aagagcttca ttatctagat atttaagttg ttcttctaca atctccctca cttcctcact
     2581 cttcacaatc tccaccatct ggtcgtgctc aattttttgc atcagcttaa ttcctcctat
     2641 tccaatcccg attactaaca aaattccgat aataatcttc attacttttt tcatcttaga
     2701 cctcctttat gaaatcctat caagtaagac gctttcttac ctcataagta tagtatagca
     2761 taacctagta agtacttgaa ctgtattttg acctatccta ttccctgtat aacagaaata
     2821 taaaagcaag aacagactga atctatcctt gctaattcct tatttaaacg tcacaatagt
     2881 acagcctgat ccacctgcat tttgtggggc atagccgaac tccttgacct gcttgttgcg
     2941 gcgtaggtac ttggtcaccc cttctcggat aactccagta ccaataccgt ggacaatatc
     3001 gacttgggct aggttattga gaagggcctg atcgataaat tcatccagtt ccatcatagc
     3061 ctcttcgtag cgtttgccac ggagatctaa gcgggctttt ggtcctcgta cattggcacg
     3121 tttgactgtg tgaacctggc gtttcttagg ctgctctgcc ttttccgcct tgactaactc
     3181 aaactcatct ttggccaagg tcatcttaat caagccaacc tgagcttccc aacgcccgtc
     3241 cttgagctga ttggtcaagg tcccgcgttg tccataagct gtaacgataa tgtcatcgcc
     3301 caccttggct tccctctgaa ttttagcttt cttcagaacc ttgtttttag acaggtccac
     3361 cacttcaggc gccaactttt tcagctctgc cttggcttca ataatctggt ggggcttaag
     3421 actagctgca gcatggagat ttttgagaat atcctcgctt tctgccaatg ccatatctac
     3481 aatttccttg gcctccaaac gtgccttgtt gagctcattt tcccgctcac gattgagttc
     3541 atcatagagc ttgcggaggg ctcgattcat cttgaagttt tcttgttcta cttcacgaat
     3601 cttgtctaag cgacggcgac tttcaaccgt ttggttttcc aatttctcaa taatgcggtt
     3661 gacatcgctg tccgtatccg tccaagactg ggctgactgg ataataatat cagatagacc
     3721 aagacggcgg gcaatttcaa aggcattaga gcgaccagga acaccctgca taaacttata
     3781 ggtcggacgc aggctattgg tatcaaattc catgctggca ttttcaatac cagaggtttc
     3841 tatcccgtag gccttgagct caggatagtg ggtggtcgcc atggtcttaa tcccccgcag
     3901 acgaaggtca tccaaaatag ccattgccaa agatgcaccc tcctgcggat cggtcccagc
     3961 tcccaactcg tcaaagagaa taagggaatc ttgatccgcc tccgctaaaa tctgcaccgt
     4021 gtgggtcatg tgactggaga aggttgataa actctgctca atagactgtt catcaccaat
     4081 atccgcaaaa atttctttga agatagccac ccgactgccc ttatcagcca agataggcaa
     4141 accagactga gccataaggt gcgttaatcc caaggtcttg agcataatgg tcttaccacc
     4201 cgtgttggga cctgtaatca cgatagccgt cagctgacta tcgaaataaa ggtcatttgg
     4261 tacgggctta gcaatgagcg gatgccgaac gttgagaagg gcaatatcct gcttctgaga
     4321 tagtttgggt acaactgcat gatgatcacg cgcaaagaga tgcttagcac ggacgaaatc
     4381 aatatgtccg ataagccagg cattgttacg aatcacgcca ctatgcggac ggagcatatc
     4441 cgacaattcc tgcaagatac ggttgagctc atggcgttct tctgctcgga agtgactgat
     4501 ttcttcgttc agggtcacca ctgcccgcgg ttcaatatac acagtcgagc cagatgcaga
     4561 aatgtcatgg acaacccctg caatcttatt gcgataggta tttttgacag gaaggacatt
     4621 tcgcccatta cggcttgcca aaatgctatc ggacagcatg tcgcctttag tcttcaaaat
     4681 atcctgcatg acctgacgaa cttggtcttc agcttcacgg atcttccggc gaattcgagc
     4741 cagcttttca gaagcaaaat cctctacaaa acctgcatca ttgatagact gtaacgagcc
     4801 ttgtaaatgg ggaaagagtt caattttctc aaagagttta tccagctggc tcaggctgac
     4861 attttccaga ttgccataaa aatccaagag ggacttagat acttccagaa cctttttaac
     4921 tgctagcagt tccgagatat tcaggtctgt atccaattcc aaacggcgca tggctggatt
     4981 gatatcactg gtggctgaca gactgaaata aggattttcc acaaaaatct gcgctatgtc
     5041 tgtcaactcg tcaaaagcct gttggatacg gtggacttcc accatgggct ccaactgtcg
     5101 taattcttca aagccctgtt ccgtcaagag atagggctca attttttgtc ttaccttgtg
     5161 aaattcaagg gtttcaataa ttttattatt catatattcc tacttagtct tttccttagc
     5221 tttatctcat tatcaaaaca ataaaagata aaaatatagt ctttcccact cccactcatc
     5281 aaatcaagtc aacaatgtct gattttaatt ttcgaagagt attataaatg acgataaaaa
     5341 ggataaggtc tcccttaccc tgctatatta ctcaaccaga gagattttaa aaagctacta
     5401 gtgaatggtg tgtactgaat catgatgttg gcaagaaaac tactgtgcaa tttatcttga
     5461 atcatcgcta acggaatagt tgatagcaag accatgacaa tctgaagaga aataaaagtc
     5521 accaagacag ccaaggcgcc gcttatgaga ttggtcgttt ttgtatcagg attaaaagcc
     5581 tctaatagat ggacaaatat tcctatgaaa cgcacaatag cataaaccaa gacgtatatc
     5641 aaaagaaagg ccaatcccgc ataaaatacc atatctaggt caaagagata tttctcatca
     5701 aaataatagt tggagctccc ctgagtagca ttggcaaatg gcacccagag ataaaggaag
     5761 gatgccaatt ttttataagt agccgttgca accaccagag caataatact tcccatgcta
     5821 taaaaggcct gtagaactag accacgactg tagccaatgt agaaactcca tgccaaaatg
     5881 agaataattg ctaatgaaat cataccttgt cctcaagctc atctaagtca atcaaggtca
     5941 cattcttttt caagaccttt tctttgacgc ttgcaagttc ttgttccttt tgttcaaata
     6001 ccatctcgcg cgttagttga acggatagag cattgattgc caacaaaagc gcgagggttt
     6061 cagggtccgc cgtcggcatc ttttctttga tggcttggta tttttcctgt gcaatacgct
     6121 caatctcttc catgaataaa ttatcatgct cagttgtcaa ggttaattgc ttctcgccaa
     6181 atgtaaattt atatcgattt aagtttgcca tatcttacct cttcttctat ctattatagc
     6241 gtaaaaaact tgatttggct aatctctcct ataaagaatg ctttctacga gcaaaatcta
     6301 caaagcggaa tttatcaatt ttatgcttgc tttctgtata ttggaattgc tgggtatcac
     6361 cgagatagac acgagattta atcaagacca aataatcatc cttcgattgc attagctcac
     6421 gctcttctcg attggtcggc tctaccgtaa tctctttttg tgcataagca atatcaaggc
     6481 ctaacttatt ttctaggtat tcgtagatgg atttttcagc aatagctgtt gtcaactctg
     6541 gcacgacatc gacagcaaga taatctgtat ccacaacgga gaccttaccg tcaatcgaac
     6601 gtgtacggac aactttccac accttgctat acggctcaaa gcctgtcaag tgcgaaaggc
     6661 tactattaac ggtaatcata tctaagctga caacatctgt cttggtagaa agctggagaa
     6721 catttgtcaa ttcctgatag gaagttaaac ctgaaaccgg gaaattgaga atttcttgct
     6781 taaggaccat tgaaccacgc ccttgcactt tttgaatcaa acctccctca gtcaaaatcg
     6841 ccaacgcctt acgaaccgta tcacgactaa caccatagat ttcctgaagc tgctgttctg
     6901 tcggtaggga gctttctgcc ggataaacat ttgtccgtat tttttctttt aagtcattat
     6961 aaatttcttg gtattttttc atcatttcct cgcaaattca tctgtcaaat aacatacaac
     7021 tatcaacatt ataacaaaat tcatttcaaa attaaaaaaa actaagcaaa aacgcttgca
     7081 ttattttttg aaatcggata caataataac acgaaagaaa tttgtccgta caaattttgg
     7141 aaaagacata cttttgagag atgtctaaaa aatatagggt gacggattcc ataagccgtc
     7201 tagaaggaaa aatatatggg aaaatttgaa aaagaagcca aacagctcct agaagctatt
     7261 ggcggaaaag agaatgtcaa tgcagtaaca cactgtgcaa cgcgcatgcg ctttgttctt
     7321 gcagatgaga aaaaagcaaa cgtaaaagtc atcgaagata ttccagcagt aaaaggaaca
     7381 tttaccaacg ctggtcaatt ccaagtcatc atcggtaacg atgtaccaat cttctacaat
     7441 gactttacag ctgtgtctgg tatcgaaggc gtatcaaaag aagctgcaaa gtcagccgct
     7501 aaaagtaacc aaaatgccat ccaacgtgtc atgaccatgc tggcggaaat cttcacaccg
     7561 atcattcctg cccttatcgt cggcggtttg attctcggtt tccgtaacgt cttggaaggt
     7621 gttcagatgg aatggcttgg acaagctatg aaagatgggc agttggtctt cgatgctgat
     7681 ggtaaccctg tatggaacac catcgttcag gtttctcctt tctggaatgg tgtcaatcac
     7741 ttcctctggt tgccaggtga agccatcttc cacttcttgc cagtaggtat cacttggtcc
     7801 gtatctcgta aaatgggaac ttcacaaatc cttggtatcg tccttggtat ctgtttggtt
     7861 tctcctcagt tgctcaacgc ttatgctgta cctggtacag atgcagcaac cattgccagc
     7921 gactggtctt ggaacttcgg tgcatttagt attgcccgta tcggttatca agcgcaagtt
     7981 atcccagccc tccttgccgg tttggcactg tcttacctag aaatcttctg gcgtaaggtt
     8041 gttccagaag tggtctcaat gatcttcgta ccattcctat cacttcttcc tgccatcatc
     8101 ttggctcaca ctgtccttgg tcctatcggt tggacaatcg ggcaatggtt gtcaacagtt
     8161 gtattagctg gtttgactgg tccattgaaa tggcttttcg gtgcggtatt cggtgccctc
     8221 tatgcgccat tcgttatcac tggtcttcac cacatgacaa atgccatcga tacacaattg
     8281 attgcggatg ctggtggaac tggtctctgg ccaatgattg ctctttctaa cattgctcaa
     8341 ggttctgcag tatttgccta cttcctcatg aaccgtcaca atgaaaaaga agcgcaagtt
     8401 tctcttcctg caactatttc tgcttatctt ggtgttactg aaccagccct ctttggtgtc
     8461 aacgtaaaat acatttaccc attcgtagct gctatgattg gttcaagtat tgctggcata
     8521 ctctctgtaa ccttcaacat ccaagctgct tcgatcggta tcggtggtct tccaggcatc
     8581 ttgtctatca aagctgaata cttgggtgca ttctttatga caatgattgt tgcgattgtt
     8641 gtcccaatga ttttgacagc tgttttcaaa cgtacaggtg cattttcaaa aaaagaagaa
     8701 actgttgaag aagttgtaac tccaactgaa gcagttgttg aagctggcgc tgcaatcgaa
     8761 ttgattagcc cacttactgg tcaaaccaaa gaattgtcac aagctactga ccctgtattt
     8821 gcatcaggtg tcatgggcca aggtgtcctt attgacccaa cggaaggtct tctggtagca
     8881 cctgttgacg gagaaatttc tgtcctcttc ccaactaacc atgctgttgg tatcactgct
     8941 acaaacggag ttgagctcct tatgcacatt ggtatggata ctgttggatt ggaaggcaaa
     9001 ggcttcacag ctcacatcaa acaaggcgac aaggtaaaag ctggtgataa attgattagc
     9061 tttgacatcg atgtcattaa ggctgctggt ctcatcgctg aaacaccagt tatcgtgacc
     9121 aaccaaactg actttgacac tcaagttatc ggaaatcttc ctcgtgccat ctcgcaaggc
     9181 gaagctattc tgacagttac aaagaattaa tgttctagga gggcgcaagg taacttgcac
     9241 ctcctatcat tgcttatgca agaaggaaaa atcaagaaag agagagcaaa atgacaatag
     9301 acaaacgaaa ggttgtttat caaatctacc caaaatctta caaggataca actggaaatg
     9361 gtgtagggga tttacgagga attattgaaa aactcccata tttaaaagag ctaggtattg
     9421 atgtgatttg gctcaaccct ttctacccaa gtcctcaacg agacaacggt tatgacattt
     9481 cagattatac agccgtcaat cctgattttg ggaccatggc tgactttgaa gaaatggtgg
     9541 ctgtcggcaa agaattgagc attgaattca tgctagacat ggtcctcaat cactgctcaa
     9601 ccgaccacga atggttccaa aaggccctag ccggcgacaa atattaccaa gatttcttta
     9661 tcctgcgtga ccagccaact gactgggtgt ctaaatttgg tggcaatgcc tgggctcctt
     9721 ttggagatac tgggaaatac tacctccacc tctttgacgt gacccaagcc gacctcaact
     9781 ggcgaaatcc tcatgtccgt gaagaactct tcaaggtggt caacttctgg aaggacaagg
     9841 gtgtcaaggg cttccgcttc gacgttatca acctgatcgg caaggatgaa gtcctcgaag
     9901 actgcccaat caacgacggc aagcctgctt acaccgaccg cccgattacc cacgactacc
     9961 tcaagatgat gaacaatgct acttttggta gtgaaaaagg cttcatgacc gtcggggaaa
    10021 tgtctgccac caccattgaa aactgcattc tctacacagc tcctgagcgg gaagaattgt
    10081 ccatggcctt caacttccat cacttgaaag tggactacaa ggacgggcaa aaatggacca
    10141 tcatggactt tgactttgaa gaactcaaac acctcttcca cacttggggt gaagaaatgt
    10201 ccgtcggaaa tggctggaat gctcttttct acaacaacca cgaccaacct cgtgccctca
    10261 accgctttgt tgatgtggag aatttccgca acgaaggagc aaccatgctg gctgcctcta
    10321 tccacctatc acgcggcaca ccttacatct acatgggtga ggagatcggt atgatcgacc
    10381 ctgactacga tagcatggat gactacgtgg acgtggagtc tatcaatgcc taccagatgc
    10441 tcttggacca aggtcacacg cctaagcagg ccttcaagat tatccaggcc aagtcccgtg
    10501 acaattcccg caccccgatg caatgggacg cttctgacaa tgcaggcttc tcaacaggaa
    10561 ctccttggct gaaagctggc aaatcctacc aaacgattaa cgttgagcag gaaaaaacag
    10621 gcccaatctt taccttctac caagaactca ttcgcctgcg gaaagaactt cctctgattt
    10681 cagaagggga ctacaaggca gcctataagg acagccagaa agtctacgcc tttgaacgct
    10741 tgctaaacgg cgaaaaactg ttggtcctca acaatttctt tgcagaagag gttgaactag
    10801 atctggcaga cgactatgcc cacggtcaag tcctcatcag caactatcct gacaacaaac
    10861 taggcaaaaa aatcattctc aaaccttacc aagcattagc aattcaagtt aaataaacga
    10921 taaaacatcc gaaaataaca ctctacatgt caattttaat tttcctaaaa ttagaacccg
    10981 ccttcacagc tcagtaggtt acttgtgaag gcaagttctt ggtttaaggt ttcttttagg
    11041 aatatatttt atactgtagt ttgcgcacga aacagctatc tggggggaga tagttgtttc
    11101 ttttttatag tcatttgaat taactttgat acatcgtcac tttcggattg ccatactcta
    11161 cgaaagtgac ttgtttcgca agtcttattt tcaacctaga acagcctcta ggctgttcta
    11221 gctacgttcc ttgtctgaaa gttaattcat tcgactatat tactacatat aaagcaataa
    11281 ccgtttcaga taaggctgaa acggttattt ttgtaagtct aattaaaaga tacatgcaca
    11341 tgatcgtagt ggttttctgt aatgctacca cggtctggca tcagattcca tgtataggct
    11401 ggaccataga tactgtcata cggcgcatag aagcgctgtt tccaaatgat gtagttgata
    11461 tttttagaag ctaagtttgc aactgcataa gccgccactt gatctcctag agctgagctc
    11521 tcaggcacca taaagtcaat tgccaatccc ttaccatggt cgccagaatc accaggacgg
    11581 taacctgaga aagaagtaat accgaaggca ttagctactt ctgcgcggaa agctgctacc
    11641 tgaggttgca aaccgacatc ataagcactt gtacttgttg tagtagttga tagggctgtc
    11701 acttgtggag tttcaactac aggctgttct acaggtgctt ctactacagg ttgttctaca
    11761 acttcctcta caggtgcttc tgctacaggc tgctctacaa cttcctctat aggtgcctca
    11821 accacaggtt gctctacaat ttcctctaca ggcgcttctg ctacaggctg ttctacaact
    11881 tcctctacgg gtgcttctac tacaggctgc tctacaactt cctccacagg tgcttctact
    11941 acaggctgtt ctacaacttc ctctacaggc gcttctacta caggctgttc tacaacttcc
    12001 tctacaggcc gttctacaac ttcctctaca ggtgctgagt cggtaactga tgaaatttga
    12061 tccaagggaa caaccgtatc ctcaaccgtt acttgattgg ttgttaggtc aacagttgcc
    12121 tgaacggtct catttgtgtt tccctgaaca ggagcttcaa tctcaacctg agtcacttga
    12181 ttgttttggt caacagtcgt cgtcagtacc gtatcaggga aaatcaagtt gacatctgca
    12241 atttgattta ttttcgccag caagtccata tcaatattca tagctgaggc gatggcagat
    12301 aaggtatctc catactgaac agtataggtc atccttcctt cttcttgtac aatttctggg
    12361 ctaatttcag aaacagtacg tggagcccat tcgatggcta aaacatttgt cgaaatcatc
    12421 cctgtactaa agagggaaag agccaatgaa gatgtgtata acatcttctt attgtttttc
    12481 atgatgggtg tttttctctt gcgacgcata tgttgtggtt tatttgttct cttacgtttc
    12541 ataatcttat tccttcttta tttttgagat ggttctatct tacctaaatt aaatctgaaa
    12601 aacaagcctt caaccgttct tttaaataaa ctgtctccac tatgtaatct taggactttt
    12661 ctgtcacaca atcaatataa atgtcatctg actgtcatat tattagataa tactcaatga
    12721 aaatcaaaaa cagactcgga gacgcagatg cagatagaac aaaagttcat caaatcaagt
    12781 caacaacgtc tggattttcg aagactataa gtaaaaaata agagtaaggc agtaatccaa
    12841 caattggcta ctaactcact ctcatttcta tttttcagat tagtcaagag cctacatttc
    12901 ttcaggataa accaagcccc attctttgcg gagttgggtc atgatctcca tgacatcttg
    12961 ggtaaatgct agatgcatgg tgttttcgat gcctgcgaca gctttttcca tatccgccac
    13021 ttcataagaa agcgccttgg ctgtatcgcc cgcttcgatt acctcttggc taccgtcttc
    13081 agtataggta atgactgctt tctgaccacg tgggtactcg taaagctcga tgtagccttt
    13141 atcgtaggca atagtacccc gttttggctg tttggcatgg agggtcaggg cgatggtcgc
    13201 catttcccct gcatcattgc tgagcaaaat ccctacctgc tcgtccacac ctgtcggagc
    13261 caatttaacc tgagataaaa cctgatttgg cttttctgtc ataaaccaac ggacaaagga
    13321 cagagcgtag acaccaatat ccaagagggc accgccggcc aagttcttat tgaaaaagcg
    13381 gttggtcatg tcgtattcct tgtagctgcc gaagttcatc tgaatcatct tcaaatctcc
    13441 aagcttgcca ctggcaacca cttcgctcaa ctgacgatag attggcatgt ggaaaatggt
    13501 catggcctcc gccaagacga cctgattttc ctcagctaat tgaatagctt ctgccaattc
    13561 ttctgaatta agcgtaatag acttttcaca gaggacatgt ttcccagcct tcaaggcctt
    13621 tctcaaataa ttgatatgag tattgtgagg cgtagaaata tagataatgt ctacttcagg
    13681 atcctcaaac acttcatcga tttctcgata aactttctcg atgccatatt tttgcgcaaa
    13741 ttccacaccc ttgtcatagg tacggttggc taccgaataa agatttcctc ccatatcctg
    13801 caaggcctga accaattcgt tggcaatgac acctgttccc agagtcgccc atttatactt
    13861 catttgcact tccatagtgt acctcacttt cttctaccat tatagtaaat tccacccttt
    13921 tctgcacact ctaactagca tttgtgttac aataagaaca tgaataccgt tgtactaaag
    13981 acctctgccc agcaaaaaca agccatgatg gctcactatg accgctatcg gcagaccagc
    14041 aaaaatcctt acatagaagc atttttcaaa ctgaccggtg ccagcctgtc catctacact
    14101 tctggaaaag tcgtttttca gggggaaatg gcagagcagg aagcagggct ctggggctat
    14161 gagccagaaa gctctggaca gacgaccata cctggtcaaa acctgcccat gattggtacg
    14221 gatgaagtgg gaaacgggtc ttattttgga ggtttggcag tcgttgctag ttttgtccgc
    14281 ccagaagacc atgcctttct caagtcgctt ggtgtggatg attccaagaa aatgacagac
    14341 caaaaaatct gccaaatcgc accactctta aaagagaaaa tcccccacca agctctgcta
    14401 ttgtcaccga aaaaatacaa tgaagtcatc gagcaaggct acaatgcggt gtctgtcaag
    14461 gtcgccctac acaatcaggc tattttctta ctcttgcaaa agggtgtcca gcctgagaag
    14521 attgtcattg atgccttcac ttccagtcaa aattatcaaa aatacttgaa aaaggaagcc
    14581 aaccaatttg ccaaccccgt cactctggaa gaaaaggctg agggcaagta cctggctgtg
    14641 gcagtatctt ctattattgc tagagctatg tttttagaaa atcttgtcca gcttggtcaa
    14701 ctagttggga tgaatctgcc gtctggtgca ggcagtaaat ccgaccaagt cgcagcaagc
    14761 atcttaaaac aatatggtat ggctggtctc aaccaaactg ccaaactcca ctttgccaat
    14821 acacaaaaag cacaaaaatt attgaaatga ggaaaaaata tgggagcaat ccaaaaaaca
    14881 aaacgctcac cactagtcgc cttcttagct gaatggggca tctttttact gtttatggca
    14941 gctttttttg ccagtcgata ctttatctgg aatcctgtct ctgtcgatgg ccattccatg
    15001 gacccaacgc ttcaacacca agaaaaactc atcatgctaa aaacgacctc tatcgaccgc
    15061 tttgatattg ttgtagccag tgagacagac agcgacggca aggaaaaact gattgtcaaa
    15121 cgtgtgattg gtatgccagg tgacaccatt cgctacgaaa acgatgtcct ctatgttaac
    15181 gaccaaaaag tggacgagcc ttacttagat gaatatctag ctgcattcca gaaagataaa
    15241 cttcaagaag tctattctta caacaaacaa ttccaagctg tggcccaatc tgctgaagct
    15301 ttcacacaag atgccaatgg ttacgtagac tttaccgtga cagtcccaga aggccaatac
    15361 tacctgatgg gagatgaccg ccttgtctca ctagatagtc gtagtgtagg aacattttcc
    15421 cgtgaaaaca tcaaaggaga agttgtcttt cgcatgtggc ctctcaaccg tattgggact
    15481 gttgattaat acaaacaagt ttggagcaaa aagcacagta ccacttctca gagttcgtgt
    15541 caacatccca gcgcagtggt tgattgggtt taacagtcca gtggactgtt aaaggttgga
    15601 gataagattt gcgaagcaaa tctcagcaat tcgtgtttta cactcaaaat ctgacctaca
    15661 tggctgatgc gaacgggttc gcttcatttc caacctccaa cagtcactac tctgactgtt
    15721 ggagctgtgc gggttgggag taaaatagtc cagtggacta ttttagcccg aacctgcata
    15781 tttggaggtg aggggaactc tttttggtct atgcgagttc tttcccactc ccttttcatt
    15841 attattggaa ataaactcta tgaacgaagt gtatgttacc ggtactattg accggattat
    15901 ttttgaaaat cctagtaatt tttataaaat ccttctcctt gaaattgagg agacagacgc
    15961 agactatgat gactacgaaa ttattgtgac tggaacgatt gccgatgtca ttgaaggaga
    16021 agactatcgt ttctatggca atctggtcac ccatcccaag tatggtcagc agctgcaaat
    16081 ttcgcgttac gaacgcagca agcctacctc agctggtcta gtcaagtact tctccagcga
    16141 gcatttcaag ggaattggac gcaaaacggc tgaaaaaatt gttgaactct atggcgaaga
    16201 taccattgat aagattttag ctgaacctga aaaactgacc caaatttctg gtctatccag
    16261 caagaacatg caggcatttg tggagaaact ccgcctcaat tatggaaccg agttgatctt
    16321 ggcaaaacta gccgagtatg gcattcccaa taaattggcc tttcaaatcc aagaccagta
    16381 taaggaaaaa acacttcaga ttattgaaga aaatccctat caactggtcg aagatgtaca
    16441 gggacttgga tttactattg ccgatagaat cgcagaaaat ttgggaattg ccagtgattc
    16501 accccaacgt tttcgggcag gtatgctctt tagcctcatt catcgctcca tggaaacagg
    16561 cgatacctat gtcgaggcca gagacttgct ggaagcaacc cttgaactgc tggaaaaatc
    16621 ccgccataca gagctggacc ccgctgctgt tgccaaagaa ttgacgggac tgattgcaga
    16681 cgacaaggta cagcaagaag gcacaaagat ttttgacaac agcctctact ttgccgagca
    16741 aggaattcat acaaacctaa ctcgcctgat gggtaaaaac ggcttcaagc ccttcccacg
    16801 tgcagacgtt gaggctgcca tagcagagct ggaaactatg tcttccctga cctacgatga
    16861 cattcaaaaa gaagccattg tccaagccat caccaatccg cttttcattc tgacaggtgg
    16921 acctggtaca ggaaaaacaa ccgtcatcaa cggcattatc gcagtctatg ccatcttgca
    16981 taagattgac ctgactcgca accgagaaga atacccagtc cttcttgccg ctccaactgg
    17041 acgagcagcc agacggatga atgaattgac aggactgcct tctgccacca tccaccgcca
    17101 tctggggctt gttgaaggac aggaagaatc ctaccgagat gattacctcg aagccgactt
    17161 catcatcgtc gacgaatttt ctatggtcga cacttggctg gccaatcaac tcttccaaaa
    17221 catctcatcc caaacccaag ttctgattgt cggcgatgcc gagcaattgc cctctgtcag
    17281 ccccggtcaa gtcctagctg acctcttaaa gattgacaag ctccccagca ttactctaga
    17341 acgtatttac cgccagtcag acgattcgac catcgttacc ctagccagcc agattcgcca
    17401 aggagctctg cctagcgatt tccgtgataa aaaggctgac cgctcctatt ttgaagccca
    17461 aaacgaacaa attccagccc tgattgagcg cattgtcggc gcagccatca agtcgggcat
    17521 tcctgcaaac gaagtacaaa tcctcgctcc catgtaccga ggtgctgcag gtattgacca
    17581 actcaacacc atgacccagg ccctgctcaa cccactggaa gagggagagc tagaattcct
    17641 ccataatgag caagccttcc gccaaggcga ccgggtcatt catctagtca acgacgccga
    17701 agccaatgtc ttcaatggcg acttgggcta catcaccgac ctcctaccgg ccaaatatac
    17761 ggactctaag caggatgaaa tcaccatcaa cttcgacggt agcgaggtca cctatccccg
    17821 taacgaatgg tacaaaatca ctctggccta tgccatgtcc atccacaagt cccaaggcag
    17881 cgagttccag gtggttatcc ttcccatcac ccgcaccagc caccgcatgc tccagcgcaa
    17941 tctggtctac accgccatca cccgctccaa gagcaagctc atcctcctgg gtgaaatctc
    18001 cgccttcgac tacgctgtca aaaacgccgg aaccgtccga aaaacctatc tggtcccacg
    18061 tttccaagga gaaatagcag agcaggacag caaggaagct ttgactgaaa aagacgaaag
    18121 caaaacagct acaaccacgc aaacccagct ccctactcag ccagacagaa aagaactggt
    18181 taaagtagtc aaagaaaaca accaacaact ctctcttctt gatcaagacc agccagaaaa
    18241 aacaagtccc caacccacag aatacatttt gactgtagac aacctactaa ccatcgaccc
    18301 catgattggc atagaacagg cagatattga agaatttttt aaagtataaa aaccagcaag
    18361 ttagtagatt tgctggtttt actcttttat agacaatatg taaagacccc cagttgagaa
    18421 ttcgtggatt tacctgtaca ctagaataaa aaacaatcaa cttctaacag gaattaccac
    18481 actcaattgg aggtcttata tgtttcattt taccacactt ttcatcggaa tggatgttca
    18541 caaagaaagt ttttcactct gctattatga tatgatgacc aatcaattca aacatagcac
    18601 taaagttggt ccaaatgtta gctatattgt gaactatgtg aatgagcttc gtcgtttata
    18661 tggtcaagat gcagaagtgt tatgtggcta cgaagccgga tgtcttggat ttaccctata
    18721 tcaccagcta caagctcacg ggcttccctg tatcgtgatg gcgcctacaa cggtgatgaa
    18781 ggaaggatct aagcgtgtta agactgataa aaaagatgca gctcagctcg caaaagctct
    18841 ggcctttcgt agctatcggc ctgttcatat tcctactgtt gaggatgaac aagtcaaaga
    18901 atatatccgt atgagaacag accacaaagt ggctctgaag aaaattaaac aacaaattct
    18961 tgccttctgt ctccgacatg attttcgcta taccgaggga agcagtaatt ggacacagaa
    19021 acatgtccgc tggctccatt ccctaaatct tgatggactt tacgcagaga ttttgacaga
    19081 atacctattg acctatgaga aattagtaga tcaaatagaa cggtatgatg cgagaattga
    19141 gcaactgggt caaagcgaca gttatcaaga gagggtctct cagctttttt gctttattgg
    19201 cattaaaaca ctaaccgctt tgcgacagct caacattttg cttcttatct tgggctgact
    19261 cctagcgaaa actctagcgg cgacaaggag agaagaggtg ctatcaccaa agctggtaat
    19321 agccatgtaa gacgacttct gatagaagct gcacaatcat tggctaaggg gacgattggg
    19381 tataaatcca aagaattgaa aaggagacaa agtggaaacc gagtggaggt gattgcttat
    19441 gcggataagg ctaatgaacg cttgagacga cgttatcgca cacttgttct aggaaaaaat
    19501 aagaaacaaa atgttgctaa agcagctatt gcacgggaat tatctggttt tatttggggg
    19561 atgatgacag gaagaatagc ttaaagttag cacttgtttt catgtacact tttgacaatt
    19621 aagttttatc atcgcagagc gatgaggaat ccctatttct atcccaaatc actgggtgaa
    19681 tttggacaga aataaggatt gaaataatgt ttgaatggaa agtatcttga aggagtttag
    19741 gacttcaagg tttgagtcat ctacgaaaat gactaagtgg tacaattgtg atccacgctt
    19801 atagagagta ggactcgcgg cagaaccatt gacctgtggg taaccaatcc acgaatatca
    19861 gagtggccaa tgcccgaagc taagaactag gctctttcta gatacttttc attttttatc
    19921 agttcgattg tttttacttg acaaagggct ttacatatca gtcttttagt ttgcttttag
    19981 tacaaggcaa cgcgctacaa gctactgcga cagtccactg gagtatttga agttggaaat
    20041 taggagataa ggttccctcg ctcttcgtaa taataaaaga aaaacttatt gactatatca
    20101 tcaaccatga ttcatcaagc tgcccctttg ttaatctgaa ctgcttgcca tgttcatcaa
    20161 tcagtgcatg aagctcctga gcgtctttta ccgaccaatc ttttatctgc tctgtaaatt
    20221 cctgtctcaa actcaaataa tcctgagact ggctaagtcc taaccgatta aatagccgaa
    20281 gagcatattg atccgccaca aaaacacttc ttcgacacaa atagagcaaa ataacatccg
    20341 cagtttcatt gccaaccccc ttcaagctca gcagctcttt tcggagtacc gctgtgtctc
    20401 aacacgatct aggcgagaaa aatctccatc gaactgattg gcccactcaa ccaccgaccg
    20461 aatgtagagt gatttttgct tgaagaatcc tgctgggcga atgcattctt gtaaatcctc
    20521 cacaggcatc tctaaaagcg aatgaattgt caaccgtccc tccaactgtt ctaaagcacg
    20581 cttggcattt gcttccgttg tttgctgaat aagaatcata gataccaaat cctttatagg
    20641 attttcatca ttccaccagt aaaattcacc atatcgccgt tttaaatttt ggtaaagaac
    20701 cgtcaactgt tccactacta tcccccatct caccttgttt ctccttgcca ttatagcacg
    20761 atgagtaaaa ggatacaatg ctacagttcc tctagtaata ttgtatctac tatctcttca
    20821 aactgctctg cttcaacttc tgggaaataa ttcaaacaat tggctgttgc aaaggctgcc
    20881 gcttctttca aaaagatttc tggggcttga ccttgactga ttcccttgac tagcaagccc
    20941 agatagaaat cccctgcggc aatcggatta cgcgtttctt tctttggaga ctgaatacgg
    21001 aagaagcgct gaccaatctt agctagactc cccttgtctc ccatggtaat gatgatattc
    21061 tcatgaggag tcacttcttt caggatacct aaaatagctt caggactttc ttcatccagc
    21121 tctggataaa tatctttcag ctcttcatta ttgattttga taagggccgg tctagcttga
    21181 taagccgcac gtaaagctgg tccactggtg tccactatgg tcagaacctc tgggtatttt
    21241 tcaataaacc gctgaatata gtcatccggc atccccttca tcagactgcc tgaaaagact
    21301 aggatgtcgc cagcttgcag gctattttca atctgctgag tgaattggtt gagcaaatcc
    21361 tctgttagtt caaagccttt ttcatagaaa agaacgacat cgcctgtgct ggtttctacg
    21421 taaatattgc aggttcttgt gttctggtca ttttcaacgg cctgcaattg atttcccttt
    21481 tggacattaa ggtcttgaat gtagcgacca atctgcccac ctaaaacggt atggatagtg
    21541 tagtctgtca ctccattttc tcgaagtgca taggccacgt tgaaactttt tccaccagga
    21601 taatccctca cttccgtcgg tctcagggga atattctttt caatcttttc cacaagaagc
    21661 gtgcggtcta gggctggatt gggacaaatc aagtgaatca tggggttctc cttttctttt
    21721 tttgtttata ttattatact atacgcaaac aaaaaataaa aagataattc ctcgatggaa
    21781 ctatctttta gaccatttaa attttttatg caagtacgga aattcgttcc tgctggtagc
    21841 cacctttttc cgcaatgtca accaaagcca cagcatagtc ggcataacta atatagcttt
    21901 caccttgcgc attgacttgg aaaacctcgc cagccaaagt gtaggcacct gctttttgac
    21961 cttctgcatc aaaatcagct gctgggctga tataggtcca gttgaccgct gtcgcctgac
    22021 ggtagatgtc aaggcctgcg cccatagcct ctgcgacagg taggtagtcc gcagggaaat
    22081 ctggagtatc tttcagcata gatgtctggc tctcgtctaa ataaagactg cctgcaccac
    22141 caactactaa aagacgagtt ggactaccaa caaggatagt cgctagatgc tcagcaagac
    22201 gagcgtgatc cggcaaggtt tctggtgtcc aagcaccaaa agcattgact actacatcaa
    22261 aaccggccaa atcttcttgg gtaagagcaa aagcatcctt ctggattact tcttgggcta
    22321 cgctcttgtt ttcagaacgg acaatagccg tcacctgatg gccacgttct actgcttcct
    22381 ttgcaatagt ttgacctgct tgaccattcg ctgcaataat agcaattttc atattgatac
    22441 ctcacttgtt tcgttgtaat aacttcattt acaacgtaag tataaatctt tttgattgta
    22501 atgtcaattg ttacagctcg aaaattaaaa aaatcatcac aaggatgatt cactaactag
    22561 tcttttagtg ctagggcaac actctacaga ctacttcaac agtccagtag agtgtttgaa
    22621 gtaggaaata gggaaacaaa gtttctcctt acgttgacct aataaaacga ctatagttcc
    22681 gccaagagat cagcaagcct tgtcttagca agttcatttt ccatagccga ctgagcattt
    22741 tccaaacggc tatctagcag aggatgaata ttgcgaccta cttggcagga aggattcggt
    22801 tgctcatgaa aagcgaataa ttgacctttt tctccaaata actccacagc ctgatagaca
    22861 tgcaaaagtg taatctggtc tggaccctgt gccaagcgag cacctccaac accacgcgct
    22921 acttctacca gaccagcctc cttgagttgg gataaaatat ttcggataat gacaggatta
    22981 accccgacac tgcctgcaat gctagtactg gtctgttttt ctttttctcc ttccagagcc
    23041 aagagaacca agatatggct ggcaatggta aatctacttg aaatttgcat ctcttctcct
    23101 ttttttcagt ctatcataga ctgaaacaga actcaagttt gaaaattagt cacggtcaca
    23161 cccagcaaac gaataccttt ttcaatcttc ccaatttctt caattagttg acgaacctct
    23221 ttctcaatcg tttccgtctg gtccgtatat acctctagac tatgacgttt cgtcaaggta
    23281 gaaaagtcac cataacgtac ctttaaaaca attgttcgcc ccctttttcc atttcgcttc
    23341 aaactgactg cgacccgttg gcagagactg attagctctt tcaggacatc ctcctcccga
    23401 taaagaagtt tgcgataggt tctttccttt ccaattgact tacgaacacg gtccacttta
    23461 acgggcgaat tagaaatccc cctcgctttc cgataaaggt cgaagccaaa acgcccaaat
    23521 ctatctatca aaaccatttc tggtacatct agcaaatctt gccccgtgta gacccccatc
    23581 tcatgcaggc gttccaccgt cttcttcccc acaccgtgaa atttttcaac aggcagggag
    23641 gcgagaatac caacagcatc ttcaggtaga atcaaggtca aaccgtgcgg tttttccata
    23701 tcagaggcaa tttttgccaa aaatttatta taggaaacac ctgcggaagc tgtcagatgc
    23761 aattcattcc aaatatcgta ttggataagc ttggcaatct taaccgcaga gctgatgccc
    23821 aacttatttt ctgttacatc caagtaagcc tcatcgatag acatgggctc caccaaatca
    23881 gtatagcgat ggaaaatttc tcgaacctgt cgcccaactt cctgatattt ttcataattg
    23941 ccagaaatga aaatcgcctg aggacaacgc tcataggcct cttttgagga catagccgag
    24001 tgaatcccaa aggcacgcgc ctcataatta caggtagaca ccactcctcg accgccagat
    24061 agtcttgggt cagccccaat gataacaggt ttgcccttca aagcaggatt atccctgacc
    24121 tcaatggcag caaaaaaagc atccatgtct acatgaataa tttttctaga taaatcattg
    24181 attaagggaa aaattaacat gactgcctct tcctgtttac aagtttaact cgctatatta
    24241 taccgcattt cttaggaagt ttcagccttt agattcgttg aaccagccat cttaccaaga
    24301 caataaacgg cagcttatca ccttattaca aatacaagca gaaatttatt ttgaaaatac
    24361 caactccacc tttcaatttt tttcatattc cttgaaaggt ttttcattta ttttcaagta
    24421 tttttgtctt gtagaaagtg ttttcaaatg gtataataat gacatgttgg tatcgatacc
    24481 aagtcgatac ccaaaagcat aaaaggagaa ccctcatgtc aacaaaagtt aaaacaaaaa
    24541 atgttgctga agacattttc gcccaagcct gggaaggctt taaaggtaca gattggcaag
    24601 ataaggcaag tgtaacacgc ttcgttcaag ccaactacac tccatacgat ggagatgaaa
    24661 gcttcctcgc aggcccaact gagcgttcac ttcatatcaa aaaaatcatc gaagaaacaa
    24721 aagctggcta cgaagacact cgcttcccaa tggacgtaga tcgtgctact tctatcgctg
    24781 atattccagc aggtttcatc gataaagaga acgaactcat cttcggtatc caaaacgatg
    24841 agctcttcaa actcaatttc atgccacgtg gtggtattcg tatggctgaa acaactctta
    24901 tcgaaaacgg ctatactcca gacccactcc ttcatgaaat ctatacaaaa cacgctacaa
    24961 ctgtaaacga cggtatcttc cgtgcctaca ccgctgacat ccgtcgtgct cgccactcac
    25021 accacgtttc tggtcttcca gatgcatact cacgtggtcg tatcatcggt atgtacgctc
    25081 gtttggcact ttacggtgca gactacttga tggaagaaaa agtagctgac tggaatgcca
    25141 tcactgaaat cgatgaagag tcaatccgtc ttcgcgaaga aatcaacctt caataccaag
    25201 cattgcaaca agttgtacgc ttaggtgact tatacggtgt tgatgttcgc aaacctgcga
    25261 tgaacaccaa agaagctatc caatggacaa acatcgcctt catggcagta tgtcgtgtta
    25321 tcaacggtgc agcaacttct cttggtcgtg tgccgatcgt tcttgacatc tatgcagagc
    25381 gtgacttggc tcgtggtaca tttactgaat ctgaaatcca agaatttgtt gatgacttcg
    25441 tattgaaact tcgtacagtg aaattcgctc gtacaaaagc attcgacgaa atctactctg
    25501 gtgacccaac attcttgaca acatctatgg caggtatggg taacgatggt cgtcaccgtg
    25561 ttactaagat ggactaccgt ttcttgaaca cacttgacaa catcggtaac tctccagaac
    25621 caaacttaac agttctttgg tcagaccaac ttccatattc attccgtcgc tactgtatgg
    25681 caatgagcca caaacactct tctatccaat acgaaggtgt gacaacaatg gcgaaagatg
    25741 gttatggtga aatgtcatgt atctcttgct gtgtatctcc acttgatcca gaaagcgaag
    25801 accaacgcca caacattcag tacttcggtg ctcgtgttaa cgttcttaaa gctcttcttt
    25861 caagctggaa caacggctac gacgatgttc acaaagatta caaagtgttc gatggtgttg
    25921 aaccaaatac ttctgaaatc tttgactacg atcaagttat tgccaacttt gaaaaagccc
    25981 ttgactggtt gactgacact tatgtagatg caatgaacat catccactac atgactgaca
    26041 agtacaacta tgaagcagtt caaatggcat tcttgccaac tcaccttcgc gcaaacatgg
    26101 gcttcggtat ctgtggcttc gcaaatactg ttgactcatt gtctgctatc aagtacgcac
    26161 aagtgaaacc aatccgtgac gaagatggct tcatttacga ttacgaagta actggcgact
    26221 tcccacgtta tggtgaggat gacgaccgtg tagatgacat cgcgaaatgg ctcatggaag
    26281 cattcttctc tcgcttgaac aagcacaaat tgtacaagaa tgctgaagca actgtgtcta
    26341 tcttgacaat cacttcaaac gttgcttact ctaaacaaac agctaactca ccagttcacc
    26401 gtggtgtatt cctcaacgaa gatggttctg ttaacacttc taaagtggaa ttcttcccac
    26461 caggtgccaa cccaacttct aaatctcgtg gtggttggtt gcaaaacttg aatactcttt
    26521 ctaaactcaa cttcaaacat gccaacgacg gtatctcatt gacaactcaa gtttcaccaa
    26581 aagctcttgg taaaacattc gatgagcaag tgaacaactt ggtgacaatc cttgacggct
    26641 acttcgaaca aggtggtcag cacgtcaact tgaacgttat ggacttgaac gacgtttatg
    26701 acaagattat ggcaggtgaa gatgttatcg ttcgtatctc tggatactgc gtaaacacta
    26761 aatacctcac taaagagcaa aaaactgaat tgactcaacg tgtcttccac gaagttcttt
    26821 caatggacga ccacgctgct gaagtttcag gccaagccta atcaagcaaa cataaaagga
    26881 cttgcacatg caggtccttt ttactatgtc gaaaaatcta ctgagtgttg cggaaggatt
    26941 gtcaatgttc ggaaggaatt atggaggatt ttcggaagga tacagaacca gttcataaaa
    27001 aaatccctgt tatacaggga tcatcattta tcatccttca aacttctata aacatcgtct
    27061 ataaaaagct tggcaattct ctttttaaaa tcatcattat taagcaggac tccaaaaaaa
    27121 tcttgatttt gcatataacc ctcagtcaaa gcattgtcaa tctcatcctc aaaagaaaac
    27181 tcaaaatctt cacgagaatt aaccttagca gactgcttga gtttctcatt tttcttcatg
    27241 agttcacgaa tagaaactgc tccgctaaca ccgatttgag gatcaatcgt caaatcaagt
    27301 tgctcattga tctcatcaat aatctctgaa agacgttttt cctgttcttc atcaataggt
    27361 ccgattttag gtttattaag cgaaagagtg tattctcctt ccaagtcagc tacggtatgg
    27421 actcctgttt gcttgtgctt catgtagtca accacaatct tatccgcaat ggtaaaatct
    27481 gtccctccga gtgttacatc aatttcctta acaagtgctt gaatatagtt ataacgttca
    27541 tgcaaaacct cattttgata ggcagtagct tgaatcagga aagtgtacat tcgaagaaaa
    27601 cctcggaaaa cctttttgat ttccagctgc tccttttcat caaattcctg aacacgactg
    27661 taacctttat tcaacaatgc tgtcattttt tgtttgtccc gactagagcg tttctcttga
    27721 tataggaact gattaaactc atggataaca tcactgtcaa gaatgccata ttcatctatc
    27781 ttacgtacca agtcaaatac atcacttggc gtaatggttt ctgccaaaat cgtttcctta
    27841 tagtaaggag caaaagcctt gtttatatcc tcataggtat ttttaaagtc caatacaaag
    27901 gttttcttat tgtaacctcc cacaatacga ttgaggcgag atagagtttg tacagctgct
    27961 acatctcgca actttttatc tacatacata gccaccaatt tcggttggtc aaaacctgtt
    28021 tggtatttat tggccacaat caagacctga taatcatctg tatcaaatct ctctttaagc
    28081 ttgtcctccg caattccgtt catcagagcc tcagtataat cctgatcatc catactcacc
    28141 ttacctgaaa aagcaactaa agctccaata ctggtgatat gatgcttttt gaaataacgt
    28201 ttaaaagact tttgatactt gactgctgct tcacgaccag atgtaacaat catagcttta
    28261 ccttgaccgc ccaactcagc cataatgtca tgactgatga aatggtccat gatgatttca
    28321 actttctggt caatattttc atcagataat tcgataaact tggcaatctt tctctttgca
    28381 agacctgtct taaactgagg atcctcctca acagccttgt tcaatttgta gtaagtcttg
    28441 taagtagtat agttattcaa gacatccaga ataaagtctt cctggatagc ctgtttcata
    28501 gagtagacat caaaaggacc ttttgaacca tctggtaagg tttttccaaa caactggagg
    28561 gttgtcgctt taggcgtagc tgtaaaagcg ataatcgaaa tgttgtcttg ctttcctgtc
    28621 cgagcgattt cttgttcaat ggcgtctgcc actgaaacct cctgcacctc atcaatggtc
    28681 ccgtcttcca catccgtttc tgtcaaaact tgactgacag cactcatata ggagcccgtc
    28741 gtcgaactgt gggcttcatc aatcagaatg gcaaatcttt tctgggcagt tggaccagct
    28801 gtcatccaat ctgacttatt gatttgggca aatttatgaa tggttgttgc gataatcttg
    28861 gtatttccag ccaaggcatc cgccaagtca ctggaagtcg ccttgtcatc cataaccttg
    28921 ataaccccag gctgatgctg gatagcctga accgcgtcct gtagctgcct gtccacaaca
    28981 atcctatctg tcacaatcaa gaccgcatcc acaacatttc ggtcttcgtg gtcatgcaga
    29041 ctgaccaaac tatgtgccaa ccaagcaatc gtattggtct tgccagaccc tgccgagtgt
    29101 tgaatcaggt aattactatc ggtgtgattg accttcatat cctctaggac acggtttact
    29161 gcccgtcttt gctggtaacg agggaaaatc agcgttttct tgtttttatt atccttatca
    29221 accttcaaaa agataaagtg ttcaatcaac tgaagaatac tatccttagt cagcacttcc
    29281 tgccaaaaat aagctgtatc tggaccagat tcattgtgcg gatttccagc cccctgatca
    29341 accccttcac catttcccat attgaaggga aggaaatagg tatcttgacc cttaatttcg
    29401 gtcgtcatgt agacttccaa ggtatctact gcgaaagaag ccaaaacccc tgagtcaaac
    29461 ttaaacaagc gatttttgct atctcgcttt ttcaactgac gaatagcatc atctaccgat
    29521 tgaccactgg aattaagctt caactcaatc gcaaaaatag ctaggccatt cagaaagata
    29581 atcaagtcta cacgttcctt atccttgtag acaacctctt ccataaccgt aaagcgattt
    29641 tgctcatacc gcttgactgc cttggcatta aaggaagtgg caggcttggg atagaccagt
    29701 ttcaattgtt tattttcaat gtaaaccccc gacttcaagg caaagagaag acctcccttg
    29761 ataatttctt ggttaatcaa gttgagaata acctctttgt ctaacttctt caagagatag
    29821 cccatctcgt cttcttgggt tgctcgcaga aactcccaca agatgtctgt atccattgcc
    29881 aagcgttgat tataattgct ctgcggtctg tgagtaaaac cattttctgt ttctaaatcc
    29941 gtgagaatcc actgctgaaa atcataacgt tctgtaaggt caaaatgagc cataggtatt
    30001 ccttattctt ccttgtactt actctacatc atcgagggag aggatagaca aatacatatc
    30061 caatctctca ttcagataac gggcaaacaa atcttccatt gctgacaggc ttcccttagc
    30121 atagaagtca tcaaaggcct gataataggc taattgatct gaaactttaa tatcaatagg
    30181 aggagagcca gccttcatca gctccaagtt cactaagagc cgtccagtcc gaccattgcc
    30241 atcgacaata ggacatctct cctcctaacc aaaacagtcc tttttcctaa cactattata
    30301 gcacagttcg gaaggataga cgacaagcgg aagggggatt agcagttttt tcggaaggat
    30361 aaggattgca taatagtttt tatagaataa acagtcatca aaaattcatc tattttctat
    30421 gtaggtatgc tataattatt tatgcagaag agtttcccaa aatgggaagg gaggttttat
    30481 gtttctaaag cataataacc tctcgaagac ggtggctcta atttctgaaa ggtaggtggt
    30541 gcctatgggc aactcatcaa aatctaacag aaaggagcag attgttgtca gtttacgaga
    30601 cgatgcaact gatgctggga ttcggtagtt tcctactatc ccttattggc ttagtgattg
    30661 tcatcgtaaa aatgagcaat aaaaaataac cgtctaaact ttgaccggtt gacgattatt
    30721 ttttagtaat tataaaacta gtcaccgtct taaacggttc tgcattgggt agttgtgagt
    30781 gcaactaccc ttttctattc ccattataac ctaactagaa aaaatagtca aacgaggtcc
    30841 tatttgacag tcagagctcc cccagagctc cgccgcctcc tgacagacat atacacagga
    30901 cacctcacct tctaaccaaa acagtccttt tcctaacgct attatagcac agttcggaag
    30961 gatagatgac aaacggaagg atgtttataa gattttcgga aggatagtta atcatcactt
    31021 gcttctctct tccaatgctt attaaaatga ttcatagcat actcttccaa ctcagctgtt
    31081 accatctaca ccctcctttt ccctgtcaca taatcataaa tcagtgtttg gcgttgtttg
    31141 ttgatatttt cgatttgttc tttcttgata gcaatcattt gattgatttg attagtcctt
    31201 ttatctaagt aggaaactat tttatcttga tcacttagcg atggaaatgc acaaaatctt
    31261 tttaatatat cctccgagga tacacgtaaa cggatttcta gaataccatt cgcatatttc
    31321 cgtagttctt tttgaaatag ctgcgttgcc ataatatagt tcacaaattt aaggtttgtt
    31381 cctaggcgtt ccttaaatac atagtaaacc ggacttatac atccgaaata atttgaatat
    31441 cctaccgacc ctatcagtat gttcatacta ttagcaacaa tggtatctgg atatgctaat
    31501 ttataatcta acagattatc tttggagttg tttccctgat ttcccttgtc ctcataagga
    31561 atgactccat ctttattcgt caatgataaa ataaagtcac ttttttgcgg gatatttttt
    31621 tcgtttatct catagatatg gaaacccaat ctatctacgt tccacccctc tggtatctgt
    31681 cctatccagt caacacctga gtcttttagg ggaacggttt tatccagtcc tcttgtgacg
    31741 gtttcgtaaa tgaggctttg gcggtagtct tccaaggtct tgatttgctc ttctagaagg
    31801 cttttgacct tatccagttg agcaactttt ttatcgagga agtcagcgat tttttttatt
    31861 tcaatctcac tcgggaatgg tattacccag ttttttatca acacttgatt tatatttggc
    31921 tgagttccac cttgtgctgc aaaaattaat tcagtttttg atatttccag tgcaagtttt
    31981 gtaaatctga ctatattttc ttctcctttt aaaacagcca ctgcttgatt aacacacgca
    32041 tctattttac taatagccaa attgccaata gaggctccgt acatagcgat tgctagaaac
    32101 ggagcttgat atattcttag agaagcagaa ctcctgtacc ccaaatctgt aattgtcttt
    32161 gaaacagcat aaacataatc ttttttatat agatcacccg attgtagcca atttatattt
    32221 ccatcatagt attctacttt agagctatcc ggcgttgtac cgctaccaat ggcaccaaaa
    32281 atatgtttaa tcggcttaat cccccactcc tctggcactt ccccaatcca ctcgatacca
    32341 ctatctttca tcctagtcat gtttgaggtc ctccaagagt gcttgtagtt ggtcttctag
    32401 gtcatagaat tgtttgagca ggtcttctgc cttttctggg gcttggtact ggtagaaata
    32461 gcgggtaaag gggatttctg ctcctagctt gctttcctcc caccagaagt gagcatctgg
    32521 gacatgagga tagacttccc gttcaaaata aacttctact tcttccgaga gcttgacaat
    32581 ctcagaatcc ttagtagtct tgtcatagac gataccgtcc gcaatctcac ccagcttgtc
    32641 tttcttctta gttgtgataa cctcagcagt cttgtccatc tcactcatag caagggctag
    32701 agcgttgaga ttggctgggg tcagcttgac ttctgacaag agttctttca atgtggctgt
    32761 aaaggtctca aagtttggat aggtagcttc cgacagacct tgacggaggg cttggaggat
    32821 ttcctcttgc ttttccctac cttcttcaag cttttgcaat tccttatctt gcttggctgt
    32881 gcgtggctcc atttccagta attcttggta cttgtactca tcaaagagct tggcaaaaaa
    32941 ctggaccgac tggacacttt ccaggctttt ctctgtaatt tctccacgac gttgtaaagg
    33001 ctgcatgacc aggtattctt tataaagaaa ttccttgctg tcaaagattt tcacacggtc
    33061 attttcctca aagtcatggt accacttgag aatatccttg atattgtcct gcgacaattc
    33121 gcggcgtttt tgtcccagtg atttccgcaa tggaacaaat tcattggttg catcgataaa
    33181 ttggacccta ccttgtcttt ctggactctt atccttatta taaagccaga tatagatacc
    33241 gattccagta ttgtagaaaa attgccctgg tagagcgata atcgcttcta acaaatcatt
    33301 ttctaagata taacggcgaa tttggctttc cccagatgtc gttccacctg agaacagggg
    33361 tgaaccgttt gaaatgatag cagctctgcc attttcctcc aacttcgcca aagcatgtaa
    33421 atggaagagc aactgagcat cgcctgtggt aggggtgttg acaaaacgac cttccctgcc
    33481 ttctgtcgac tcaaagagag cctgatctgc cttgaccgcc tgctctactc cgtcatccgc
    33541 atccttacct ccccaagact gaccaaaggg tggattggca atgacaaagt tcatcttctt
    33601 atcgtgaaat gggtctgaat ccttgagcgt atccgtctta acaaaataat ccgactcttc
    33661 ctgacgaatc agcatatccg ccttgccaat accgtaggtt tcagccagat actcttgacc
    33721 aaacaagcgg acgttaacct tgggattgag ctgttgaata taacttttgg cagttgccag
    33781 cataccacct gtacctgccg ccatgtctaa aaccttaatc tctttattgt caacaaaaag
    33841 ctcttcatct gcctccatca agagcaggtt gaccataaga gcgatgactt cccgtggtgt
    33901 gtagtgagaa cctgcctcct cgttttcaga aaagcggcgg ataatatcct caaacatata
    33961 gcccatccgc atagaatcaa tggaacttgg tgataaatca agttccgaga atttcttcac
    34021 tactgtaaag agacgccctg tacttgccaa ggtatccacc tgctccttaa atttcaaatt
    34081 ctcgataata tccttgactc gtttggaata accatctagg taatccaaaa agttatcctt
    34141 gatagcatcg ggttcgttca acagattctt caaagtatgt ttgctggtat tgtagtattt
    34201 atagcctgta agagactcaa agattttctc tggcgttgac ggatttgact ggaactgagc
    34261 caacactttt tccttggttg gtaaaagggc agcttccaag cgagccaata caaacatggg
    34321 aataatgaca tcacggtact tatccgctcg gtaagcacct cgtagggtgt ttgcaataga
    34381 ccagactaaa ttaacatcct tactgatatg gatgggacgt ttttggacgg agaagggagc
    34441 tttgatcggc agcggtttgc ggctattttg gcccagctgg ctgagcggaa gattcccttt
    34501 gtcatcgcga gtggcaatgg gattgagcgg ttactacaat tatgccaagg atttgaaaat
    34561 cgactgattt tcgtggctga taatggagcc catgtgtatc aaaatggcaa gacagtaatt
    34621 cgtcgggcta ttcagcaagt ggaagtcgaa gcaatactgc attttttcaa aggccgttgg
    34681 gcggatgtat gtttgatgtt gtcgaatgaa gaaaacattt atatgcaggc tggggcaggt
    34741 atgccatttg cagggacgga tttgccaata gaaccagctc aaatggctgc cttccaaaat
    34801 cgtgtgacct atttagacga ccttagtgcc tatcctattt ctgagctgat ttataaggtt
    34861 ggtatctggg ttccggaagc gagtgtggag tcgataacgg aagagtttaa ccaggctttt
    34921 caaggtcgtc ttactgcagt gacaagtggc tatggctcca ttgatatatt gccagaaggg
    34981 attcataagg catggggctt ggaacaggtt ttgaccagtt tagatatcga acctgaacag
    35041 gtaatggcct tcggtgattc agacaatgat attgagttat tgtcctatgc tgggcattcc
    35101 tatgccatgg aaaatgcgac agacaaggtc aaggcagtag ccaagtacat ggctccaagc
    35161 catttgggag ctggtgtgct tcaggtcatt gaagaatata ttttataagt atatagaaaa
    35221 aagctagtgc tctcaatcca gagaatgcta gcttttttaa tttccaacac tggtgaattt
    35281 ggtcatacca tagcggaaga gtttgtaatt gatggtaaat aagactagga caaccagtgg
    35341 cagagccagt ccccacatag acaagtctaa gaagtagagg gctgggaaat aggctgtaaa
    35401 agcataaggg aagacaaata tcagcaggat ttgaatgagt tttggataga tgttgagtgg
    35461 gtattgagcc atctgattga gggcgaaaat tcccatagtc aaaggaaatg attccacaat
    35521 ccaaaatgct agagcggttg gaccgagttg aatggctgca tagagtagcc cgatacaaat
    35581 ggcaataaag attagtaagg ctagttttcc aagactccat tccatcccca gttccttgga
    35641 agcctgggct agtgcaaggg taccgatgag ggttgttccg attccttgtg gctggattcg
    35701 ttcacagata agttgaaaaa gtgggttcac aggcatgagg aggaggcgtt caaattcgcc
    35761 ttgtcggatg tagcgactgc caaacatcca gagattgtca aagaaaatca agtgaatgga
    35821 gcgtccgacg gtcgcgattc catagataaa gagcatttga ccgtagttga aaccagcgat
    35881 ttccttaata tttccaaaga ggatgttgag gaaaatcagg tagacaattt gttcaatcaa
    35941 agaggagaaa agcccgatga agaagtccac ccgaaaggac atctgggcca tcatgtagac
    36001 cttgatgtta tatagataga ggctgatata tttcttcatg ttaacctcca aaaatgacaa
    36061 tacgacgctt ggcttgggac caaagagcag cgatgaagca ggctagaatg ggtatccata
    36121 taacttgcaa tcccaaagca gttagatcgc tttcctgtcc caataaaatg gaaactggaa
    36181 cgttaaccgc ataattatag gggaggagtt tcaaaaagtt ttccacagcc tgtggataga
    36241 agctgagtgg caaaagcgct ccagaagcta gattgaaaag tcccattctc agaagcatga
    36301 ctccccaggc attgaccgta aaaaatgcta agaagccaaa agccatatcc agcaattgaa
    36361 cgataaacat accgaggatg gagctgacta gaaagagcaa aatagttttt ccgtcaggta
    36421 gataaaaatc ctgatgaaca agtatgatac cgataaatac gatagcaaat tttatcagtt
    36481 ccaagagctt atttccaagg tctttgaaaa agagggctag gataaaggaa tagggtctga
    36541 gaaattctcc agcaatgctt ccttttaaaa tgctgtagga taaatcttct ccgagtgaga
    36601 aagaatttaa actggctagt agattagcaa agatgatata tgtagtaaag gtttgcaggg
    36661 taaagccatt gacttctgat tgagtgaaga aaatggtttt ccagacatag agagctacca
    36721 aaatcttcac tgctagtgaa acgaaagtcg ctagaaagaa agccttatac tgcatagcat
    36781 tcatcatagt caggcgggtc atgtagagat atttacgcat ggataccctc ctcataaatc
    36841 tgacggacca tggtttcaat ttcaagctcc ttcatggtaa catcttcaat ggcataatga
    36901 ttgaaaactt gctcaatcac ctgggcgctg gtccagacct tgctttggta gtggatttca
    36961 aagtgaaaat cgtctttacg aataaattcc cagccctcca attgcaaatc tttttcaatt
    37021 ggtttttcag tggagaagag aatggtcttc actgtggaaa agcgttcttt gaggacggtc
    37081 agtgaaccat cgtagacctt cttgccctta tcaatgataa aaatccgctc acagaggctc
    37141 tcgatgtcct tcatatcatg ggaagtaatc aaaaaagtgg tctggtattc ttgattcata
    37201 tagcggatga aggagcgaat ggtttccttg acgctggcat ccaagccgat ggttggctcg
    37261 tccaaaaaaa caacggcagg ctggtggata aagatagccg caaattcaca gcgaacccgt
    37321 tggccgagtg acagattacg aatcggttgc ttcataatat cagccaagtc caatagctca
    37381 atcaagacag ccaatcgctc tttgaatacc ttatctggaa catcataaat ttttgcgtga
    37441 aggataaaag attcctggac aggcaagttc caatccaagt gagatttttg tccaaagaga
    37501 actccgattt gcttattgac agctttgcgg ttttcttgag ggttgagtcc gttgatacga
    37561 acctgtcctt ggtctggata gagaacacct gtcagcattt tgatggtggt ggatttacca
    37621 gaaccgttgg agccgatata gccgatgatt tctccttttc ctacctgtaa ggaaatgtct
    37681 tgaacagcag ggattgactt tttctttggc ttgaaaaagg ccttgataga acctttgaga
    37741 ccgacttcct tatcaatgat tgaataggtt tttgaaagat gttctgcctg aatcatatca
    37801 taatctcctg ttcgaaaacg tttgcgtaag ataaggatat tataacatat tccccagaaa
    37861 gtggcggtaa aaagtcacct ttaaggtaac atttttatta gaaaatcggt catatatcga
    37921 ggagattctt gcttaccatt tttaatccat acctgcatga taccgaagaa ggcatgtgaa
    37981 aaatagatgc tgctgtattc tttttccagt tgtgataaat tctcttttcc taagcgctca
    38041 gccaaatcat tggcaacaag aagtcggact ttattgataa gaaaattttg gatttcttga
    38101 gttccgttat gggtcagtag ggcagaaagc aatttttcac gatagagcaa ctcgaaaatt
    38161 tctaaaaatg atgattggcg attgccatca taacggtcaa atatagcctc taatttgtga
    38221 aaaagtccct gttggtagga gtcaattaat tcatatttat ccttatagtg ggtataaaaa
    38281 ctggaacgac tgataccagc agtctgggct aggtgtgttg ttgtaatgtc attaaatcct
    38341 tgtgattcca ggcaggttac catagcttct aaaattgcct gtcgggttcg ttctttccga
    38401 ttatctgttc ccataatttc tccttttgaa catttttaga cacagtgtct aaaaactgtt
    38461 cttctgactt gattttgaaa atgatacttg tataatgtat tttatcagtt tttggacagt
    38521 atgtctaaag gagttgctta tgttacaaaa agtaaagaat attttcaaaa aaccaatgac
    38581 cttgattacc attcttggta ttgcctgtgt cccagcctta tataatatta gtttcctaac
    38641 ctctatgtgg gacccttacg gccgactaga ccagctgcct gtagcagtga tcaatcaaga
    38701 ccagtcggcg agctttcaag ataaaaccct cacaattggt gatgatatgg tggacaatat
    38761 gaaagagagc aaaagtctgg atttctactt tgtatcagaa aaggatgcgg agaaaggttt
    38821 ggaagaaggg gactactata tggtcatcac tctaccagaa gatttatcag aaaaagcatc
    38881 tagtctcttg acgaatcagc ctgaaccgat aacgatttct tatcaaacct ccaaaggtca
    38941 tagctttgtt gcttctaaga tgggcgaatc agctatggag aaattaaaga tatccgtttc
    39001 agaggcgatt accgaaacat acacaactgc cgtttttgat agtatgagag aaattcaaac
    39061 tggcatggtc gaggcggcag atggtagcca acaattaaca aatggagcta gtcaattgga
    39121 gtcaggcagc caaacacttt caaatggact gactacttta acgacttcgg gtcaagtact
    39181 cgtgacagga gcaaaccaat tggcgactgg agttgtgttt tatacagatg gagtcaatca
    39241 ggctgcaaca ggcagtcaaa cactgttcag tggcttaacc acctatacaa atggggtagc
    39301 tagtcttgct tcaggtgcgg agcaattaaa tgctaattcc tctcagctca tcgctggggt
    39361 gggacaattg caatcaggag caagtcaggt tgaacaattg gtaacagggg ccaatcaatt
    39421 gcaggcaggc ttggagcaac tcgctagttc aactagtttg tctgctgaac agtctagtca
    39481 gatacaagca ctcttgacag ggcttcctca gttgcaggcg gccatcaatc aattaaatga
    39541 tagcctatca agtatcggag gacttgcagt tgataactct actctatcta gcctcttgac
    39601 ggagatgggg gctcaggctc aaggcttgtt gacagcagcc caagctgata aaacagccag
    39661 tatcgaagcc ttgcaaacca cggctaccta tcaaaacttg ccagctgatc agcaagctga
    39721 attggttggt gccctccaaa attcaccttc gacaacagcg acagcagccc aaacgatttt
    39781 ggatcaattg tctcagctca gtcaaaccct ttctagctta caaagtcttt ctggcatggc
    39841 aacacaaata agccagctgc aatcagctgt cggtcagatc aacacggctg ccaatcaagc
    39901 attgccaggt gctacaacag ccattgaaac cctatcaagt ggcttgaatc aggtcaacac
    39961 cgccttgaac cagcaagttc taccaggaac tcaaaccttg acgagtggtg ttggtcaact
    40021 tcaaatgcaa ctgtcaggcg gagcgagtca actcatgtca ggagtaacag cctataccgc
    40081 tggtgttgcc caattagcag caggtggagc ccagttggtt gcaaacaata gtagcatcca
    40141 atcaggaggt ggccagctaa catcaggatt ggcaaccttg gcatccaact ccagtcaact
    40201 tgtcagcggt tcaggacaac tggcttctgg tagtcagcaa ttaattgctg gtgcggatca
    40261 attagctagt ggcgggaaaa ccttgacaag tggtattact agcctccgca caggtagtga
    40321 aaccctaacg aattcactca gctcagccag tcaacaacta tcagtcgtct ctgtagagga
    40381 caaaaatgca caagcagtgt ctcaaccagt caccttggaa cacagtgatc aagatgatgt
    40441 gaagaccaac ggtgtcggaa tggctcctta catggtatca gtcgcactga tggttgcagc
    40501 cttatcagcg aatgttattt ttgtcaaaca cattgataat cgctcctaca agaatcgttg
    40561 ggactgggcc aaaggaaaac tcttgctcaa tggtatcatt gccagtctag cagcagtgat
    40621 tctgtacggt gttcttcgct tgattggaat cgaaccggct catccaatgg caaccttggg
    40681 attaatcctc ttagcctctt gggccttcat ggccctcgtt acagccttgg tgggctggaa
    40741 caatcgtttc ggatccttcg caagtttaat tatcttgtta ctacagcttg gatcaagcgc
    40801 aggtacctat ccaattgaac tcagcccacg cttcttccga gtcattcagc cctatcttcc
    40861 aatgacctat tctgtttcag gtcttcgtca aaccatttct atggttggaa atagtagtca
    40921 tcaagtttgg atactgagcc tcttcttagt aggctttatg ggactaggtc tcttgattta
    40981 taatcaaaaa gatgaataag aataaaacca actgcttcat gtgaacagtt ggtttttggt
    41041 tgatgtggtt atttgggggt ccctaaattg attgtcgcat tggtggcttc aatggtcagt
    41101 ttgttcttgc tacctttgtt ttctagggtt agggtctgta gatcgttttc tgtcttgaca
    41161 gggaatttgg tgtacttatc gctagtgaaa ataccgactt cccctagtcg ctcttttaag
    41221 taagggtctt ggttaaccat ctctcccaaa tcattcccat cttcatagta gtaaccttgg
    41281 gcttctacta attttttctt gtcgatctgg ttggtgatga gcaagttgct atctgccagg
    41341 ctcttgtccg tcacatccaa aaatgtcgta gaggagtagg tgtcggatgg agtgaaatga
    41401 ttatcgccaa gaagagtcgt ttgtctgcta tccagctggc tatagctctc gatggtcaca
    41461 ttttccaaac tggtttcata caggcggacg ctgcttccct gtaggttgat gtgcatatct
    41521 tttagagtgg attgtgtcgc ttggaagtag cctgcttcaa tctgaccgct gtcaatagtc
    41581 accttgtcaa gagtgacacc accagacaga tttgcctctt tgatatggat attctcaatc
    41641 gtgaaaccgc caaaattata gaagtggaga ttgtgtccct ctaatttatc cagtgtcttc
    41701 cctttaggca cttcaatggt gacggagaag acattgatac gacgctgggc caagctttct
    41761 cccagatact gcatgattcc ctcaatggca aattctagtt cctgtgcaga gagggttaag
    41821 acgccgtctt tctcactgag ttttagaggg ttttggatat tgttgtcgga gttggcatag
    41881 gtcacatgat agttgttatc actagactct ttgatgtaga cgctatgggg gataaaatca
    41941 attttaatgg tattcaaatc tgtgaaggtc ttatggactt ccgttggagc agcaacctct
    42001 tctaagcggg ttatgcctcc ggtgaaaaat ccaatgccag ctagaattaa gcctgcaatc
    42061 aggctgacaa agccgataat aatggcgatg gtaagtttct ttttcatgct cgtttacctc
    42121 gtttcaagat ccatttgaag caagccttga ccagtcgcca agaccagtag gcaaaaaatc
    42181 cagtcaagat gtagatgaga atagctccgc caatcaaaga taaacctgag ccaaacccca
    42241 tgaggaagat attgaatcct tctgacataa ggctaaaggc ttcccaaatc agatagccac
    42301 cgctggtgag aagtccgaca cccaaaacaa aggcaccgac aatgagggcc aagatgagcg
    42361 ccaccaatcc caatagacta gctaggagaa tgagcaaaag tggaatggcg ataggcaggg
    42421 aaatgacagc taggatagcc aaccagagcg ttcgttttgt ttggctaaaa ttacggaagt
    42481 agcgaccgag gaaaaaggcg ccgaggataa gagtcgcaaa cagaggaatg actccgataa
    42541 actctcccat gataaagagt aggaagaaag agaagagacc tgtcatactt aaggttccca
    42601 gaccaaccca gagtttccag ttgagttgaa taggttcttg ttgatccttc tcctcctgga
    42661 tttgcttgtt gagcatgttg ttaatgagtt cgctggcagc ttcttttggt gaaccaagtt
    42721 cttctataat ttctgtctca tgctctggtc cagcctcgtc aaaatactca ttaaagaagc
    42781 tgatggcttc aaagtattct ttgtggggca gttttttgag atgtttttct aactgctcca
    42841 tgtattcagt tcttgtcatg gcggacgctc ccttctatga tgccgtttat cgtgtttgta
    42901 taggtatccc agtcatcttt gagtcggacc aattcttcgt gacctaactg agttaggcta
    42961 taatacttgc gcatacgacc ctgatattct tgagaataag tagtcaaaaa gtcattttgc
    43021 tccaatcgtt ttaggatggg atagagggcg gactccttga tgttggcaat taatttaatg
    43081 gtctgacaga tttcatagcc ataagaatca tcggattcca aaatagccat gatgagaaat
    43141 tctgtcagca ctgcggggac tggaaaatgc ataggac
//
LOCUS       DBNFCX010000005        41673 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.005, whole genome shotgun sequence.
ACCESSION   DBNFCX010000005 DBNFCX010000000
VERSION     DBNFCX010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 41673)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 41673)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..41673
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.005"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(170..2032)
                     /locus_tag="AC1PJC_000187"
     CDS             complement(170..2032)
                     /locus_tag="AC1PJC_000187"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0002161 - aminoacyl-tRNA deacylase
                     activity [Evidence IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HIP6619236.1"
                     /translation="MKQSKMIIPTLREMPSDASVISHALMLRAGYVRQISAGIYSYLP
                     LANRVIEKAKNIMREEFDKIDAIEFLAPALLSADIWRESGRYETYGDDLYKLKNREGS
                     DFILGPTHEETVTLLARDAVQSYKQLPLNIYQIQSKYRDEKRPRNGLLRGREFIMKDG
                     YSFHASYESLDQTYDDYKAAYEAIFTRAGLEFKAIIGDGGAMGGKDSQEFMAITPDRT
                     DLDRWVVLDKSVASFEEIPEDVLEAIKEELLAWSVSGEDTIAYSSESGYAANLEMATS
                     EYKPSTAVVVEEDLVKVATPDAKTIDEVAAFLNIVEEQTIKTMLFMADGEPVVALLVG
                     NDQVNDVKLKNHLGADFFDVAGPADAEKIFGAGFGSLGPVGLPEDIKIIADRKVQDVK
                     NAVVGANEDGFHYTGANVGRDFQVTEYVDIREVKEGEPSPDGHGVLNFARGIEIGHIF
                     KLGTRYSDSMNANILDENGRSMPIIMGCYGIGVSRLLSAVLEQHARLFVNKTPKGEYR
                     YAWGINFPKELAPFDVHLIPVNVKDEEAMALTQSIEASLVGAGYEVLTDDRNERVGVK
                     FSDSDLIGLPIRVTVGKKAADGIVEVKIKGTGDTVEVHVDQLLETLQILTKENE"
     gene            complement(2549..3808)
                     /gene="rseP"
                     /locus_tag="AC1PJC_000188"
     CDS             complement(2549..3808)
                     /gene="rseP"
                     /locus_tag="AC1PJC_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HIP6619237.1"
                     /translation="MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKI
                     FAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKTGSPASLSLNEAGVVTRINLSGK
                     QLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
                     QNATVWGRLMTNFAGPMNNFILGILVFIILFFMQGGVANPSSNAVSITEGGALQAAGV
                     VTGDKILSVNGNTTDSYTEVATIISKAATDATTAPSFDLVVEHDGKNRHVSVTAEQVD
                     GAYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANFDVKQLGGPVAIYKV
                     SSQAAEFGLVSVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRKKPLKPETES
                     YITLAGVAVMVVLMIVVTWNDIIRVFF"
     gene            complement(3818..4624)
                     /locus_tag="AC1PJC_000189"
     CDS             complement(3818..4624)
                     /locus_tag="AC1PJC_000189"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004605 - phosphatidate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0016024 - CDP-diacylglycerol biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HIP6619238.1"
                     /translation="MTNDLQKRVIFGGIALAIFIPFLLAGGMAFQFFVGLLAIIATAE
                     LIKMHRLAPNSIEGVLAMLASLVLALPLQNYLTFLPTDGNYTAYAIVVFLLLGSTVFN
                     IGHYNYSDVVFPIASSFYVGIGFHSLILARMDGLNKVFFALCLVWATDIGAYLIGRQI
                     GRRKLLPKVSPNKTVEGFVGGILSAVVVAIIFLIVDKSLLAGYSFGMMLLLVVIFSIF
                     SQFGDLVESAIKRHFGVKDSGKIIPGHGGILDRFDGMIFVFPIMHFFGLF"
     gene            complement(4634..5389)
                     /locus_tag="AC1PJC_000190"
     CDS             complement(4634..5389)
                     /locus_tag="AC1PJC_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000466694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HIP6619239.1"
                     /translation="MFKFNFKKKESIETAIEVPKHIAVIMDGNGRWAKKRMQPRIMGH
                     KAGMDALQKVTKTASDLGVKVLTVYAFSTENWSRPEKEVKFIMNLPVEFYDKYVPELH
                     ANNVKIQMIGDHSKLPVPTLNALYKAEQKTKSNTGLILNFALNYGGRDEVTRAVKAIA
                     QDVLDAKFNPGDIDEKLIADYLYTGTLSPTLRDPDLVVRTSGELRLSNFLPWQTAYSE
                     LYFTDIAWPDFDGEALKLAIKEYNRRHRRFGGV"
     gene            complement(5503..5826)
                     /gene="yajC"
                     /locus_tag="AC1PJC_000191"
     CDS             complement(5503..5826)
                     /gene="yajC"
                     /locus_tag="AC1PJC_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HIP6619240.1"
                     /translation="MEGLFLPLVMVAMIGFMFYSQRKQQKQRQEALNQIKKGDEIVTI
                     GGLFGIVDEIDDKKVVLDVDGVYLTFERGAIRNRVASSNTTSAVVEEVAVETTEATPE
                     SAIEE"
     gene            complement(5936..7228)
                     /locus_tag="AC1PJC_000192"
     CDS             complement(5936..7228)
                     /locus_tag="AC1PJC_000192"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HIP6619241.1"
                     /translation="MTSVVVVGTQWGDEGKGKITDFLSANAEVIARYQGGDNAGHTIV
                     IDGTKYKLHLIPSGIFFPEKISVIGNGVVVNPKSLVKEINYLHDSGVTTDNLRISDRA
                     HVILPYHIKLDQLQEESKGENKIGTTNKGIGPAYMDKAARVGIRIADLLDKEIFAERL
                     KTNLAEKNRLFEKMYESTPIEFDEIFEEYYAYGQEIKKYVTDTSVILNDALDQGKRVL
                     FEGAQGVMLDIDQGTYPFVTSSNPVAGGVTIGSGVGPSKIDKVVGVCKAYTSRVGDGP
                     FPTELHDEIGDRIREIGKEYGTTTGRPRRVGWFDSVVMRHSRRVSGITNLSLNSIDVL
                     SGLETLKICVAYDLDGERIDHYPASLEQLKRCKPLYEEMPGWSEDITGVRSLDELPEA
                     ARNYVRRISELVGVRISTFSVGPGREQTNILESVWSAK"
     gene            7592..9823
                     /gene="gshAB"
                     /locus_tag="AC1PJC_000193"
     CDS             7592..9823
                     /gene="gshAB"
                     /locus_tag="AC1PJC_000193"
                     /EC_number="6.3.2.2"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate--cysteine ligase
                     GshA/glutathione synthetase GshB"
                     /protein_id="HIP6619242.1"
                     /translation="MLQKLSPNSPILQATFGIERESLRINSNHRVAQTPHPHKLGSRS
                     FHPYIQTDYSEPQLELITPIAQSTKEARRLLGAITDVAARSMDRQEYLWPLSMPPVIS
                     EEEIQIAQLDSDYEYQYRVGLGERYGKLVQSMSGIHYNFELGKDLTQQLFELSKETDF
                     IAFKNTLYLKLAQNFLNYRWLLTYLYGASSLAEKGFLTTEVGCVRSIRNSKYGYVNSD
                     DVHISFSSLQQYVADIEQAVQSGQLSAEKEFYSSVRLRGAKTSRDYLSKGISYLEFRS
                     FDLNPYDPLAISQETLDTVHLFILSLLWLDQLTDVDNTLAKADKLNNLIALSHPHTPL
                     PSEADAMPILTAMKAIVLHFGLDDYYGQLIAHVEASLQDPHLTLSGKIAEQVEDGSLE
                     KFGQQQGQVFHDYAWTAPYALKGYENMELSTQMILFDAIQLGLNVEILDEEDQFLKLW
                     HGDHVEYIKNGNMTSKDNYVIPLAMANKVVTKKILDQAGFPVPAGAEFANKTDALRYY
                     GQVASSAIVVKPKSTNFGLGISIFQEPASLTDYEKALDIAFSEDSHVLVEEFVAGTEY
                     RFFVLDGKCEAVLLRVAANVVGDGSSTIRELVDQKNQDPLRGRDHRSPLEIINLGDIE
                     LLMLEQQGYTPDTVLPEGIQAFLRGNSNISTGGDSIDMTDQMEESYKQLAADMATAMG
                     AWACGVDLIIPDRTKPASKDEPNCTCIELNFNPAMYLHTYTYAGPGQSITPKILKKLF
                     PEL"
     gene            10391..13495
                     /locus_tag="AC1PJC_000194"
     CDS             10391..13495
                     /locus_tag="AC1PJC_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6359 domain-containing protein"
                     /protein_id="HIP6619243.1"
                     /translation="MKIRKRSLFYTVGSVAVTAGLLLSLATSPIPSVHATEVAIENYP
                     SLAITKSEVTIQGYLIAPLNSSGTAFDATNKTNLALGASMDTAAADTIPIQLKEPLRS
                     QFNLVDHPELVGKLVRITGTSDTYMKRAGIKPATAIEIVDSSSTNVQPPTSENTTTES
                     NDLVSTPIATVRSGAQGTEYTVSGKIISLVNGWGGNGFYLQGSDGAGIYIYPGAALGY
                     QPGDTVQLTGTLGEYKGELQLTAVSNHKAISEHFNAPITETNIAQLATQAQATLVSLK
                     NLTVGDIQSDSYQNSTFTVTDSEGQTVDVRLDSRTGIKTADLLNHINKGDKINLTAIL
                     STYNGKIQLKPFDLSHFEVVEKATTETAPGKTETVTVGQIQGASHQSPLTNQSVILKN
                     VVVTYVTSANNFYVQDVTPDGDVKTSDGINIFTDKLKTNVKVGDLVTIAGRVEEYLGK
                     GYTERGETDLTITQIRATEVTVDGTAPVPSPIVLGLDRTIPADIIDNDGLAQFDPEQD
                     ALDFWESVEGMVVAVDDAKILGPLKNKEIYVTPATSQLPLNNVGGVNLRPEGNNTNII
                     PLLLKNGKQIVKSGDYFTGRIAGPVTYSYTNYKVYVDDSTLPTLHEGATKPETTTIIP
                     NDDKLTIASYNIENFSADSKSTSDAKVQRIAKSFVSDLHSPDIIGLIEVQDNNGATND
                     GTTDASKSAERLIAAIQAAGGPTYTYVDIAPENNKDGGQEGGNIRVGFLYNSKRVSLS
                     DKPIGTATQAVAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFVFKGEKVVVLANHLN
                     SKRGDNGLYGKIQPVSFKSEEKRHILAQTIADFTKAGLAQNPNANIVMLGDFNDYEFT
                     KTIEILETGGMANLVSRHDASDRFSYFYNGNNQSLDNMLVSTNLLERYAFDMVHVNSA
                     FMEEHGRASDHDPLLVQLDVTKAQEPSDKQTDDSGTVNNSDDNGTTNNNKPTNLSTSN
                     QTAVNADDRSGATDKGQTTVTPTANNSQKKILPKTGEETSFVLITIGLVILSACLVKK
                     QKES"
     gene            13575..14441
                     /gene="hslO"
                     /locus_tag="AC1PJC_000195"
     CDS             13575..14441
                     /gene="hslO"
                     /locus_tag="AC1PJC_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HIP6619244.1"
                     /translation="MDKIIKTLSKSGHFRAFVLDSTETVKTAQEKHDTMASSTVALGR
                     TLIANQILAANEKGDTKITLKILASGAVGAIISVANTKGQVKGYIQNPDLDYKRTATG
                     EVIVGPLVGNGQFLVITDYGTGHPYNSMTPLISGEIGEDFAYFLTDSQQTPSAVGLNV
                     LLDEEDKVKVAGGFLLQVLPGATEAEIARFEKRIQEMPAISSLLASENHMEALLSAIY
                     GDDDFKRLSEEEIGFVCDCSKDRFLDALASLPKADLQEMKEEDKGVDITCQFCQTHYH
                     FDKNDLEELING"
     gene            14434..15438
                     /gene="dusB"
                     /locus_tag="AC1PJC_000196"
     CDS             14434..15438
                     /gene="dusB"
                     /locus_tag="AC1PJC_000196"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HIP6619245.1"
                     /translation="MANLNTPFMIGDVEIPNRCVLAPMAGVTNSAFRTIAKEMGAGLV
                     VMEMISEKGLLYNNEKTLHMLHIDDNEYPMSIQLFGGDAEGLKRAADFIQTNTKANIV
                     DINMGCPVNKVVKNEAGAKWLKDPDKIYHIIKEVTSVLDIPLTVKMRTGWNNTDLAVE
                     NALAAESAGVSALAMHGRTREQMYTGTVDLETLTKVAGSLTKIPFIANGDIRNVEDAR
                     QRIEEVGADAVMVGRTAMGNPYIFNQINHYLETGEVLPDLSFDDKLNVAFDHLTRLTN
                     LKGESIAVREFRGLAPHYLRGSAGAAKIRGAVARAETIEQVQELFDQAREAYQERIAK
                     "
     gene            complement(15537..16025)
                     /locus_tag="AC1PJC_000197"
     CDS             complement(15537..16025)
                     /locus_tag="AC1PJC_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyltransferase/cytidyltransferase family
                     protein"
                     /protein_id="HIP6619246.1"
                     /translation="MKQTVAVVFGTFAPMHKGHLDLIERAKLDCGQVCVVVSGYDRDR
                     GDLIGLDLLTRFRAIQSQFEGDDFVEVRALDETALPPYPAGWDLWLDRLLGLLDLSEH
                     QVPVFYVSEEEYAQELHSRGYQAHFSPRKFGISATLIRENPEKYRDYIAPAFVNFFAE
                     QE"
     gene            complement(16120..18570)
                     /locus_tag="AC1PJC_000198"
     CDS             complement(16120..18570)
                     /locus_tag="AC1PJC_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HIP6619247.1"
                     /translation="MKISTGLQRVFEDAQLVAQRYACDYLETWHVLLSLVINHDTVAG
                     AVLAEYPISISDYEHATFVVTDKVYREELDSFRILPSSKRLDETASFAKKIAEVVKDK
                     ELGTEHLFMAMLLDKRSTASQILDKVGFCFEDSDDKFRFLDLRKNLEARAGFTKEDLK
                     AIRSVMKGGKAKPTNMGQMMGMPPAPQSGGLEDYTRDLTALAREGKIEPVIGRDAEIA
                     RMIQILSRKTKNNPVLVGDAGVGKTALALGLAQRVAAGDVPVSLAKMRVLELDLMNVI
                     AGTRFRGDFEERMNNIINDIEEDGQVILFIDELHTIMGSGSGIDSTLDAANILKPALA
                     RGTLRTVGATTQTEYQKHIEKDAALVRRFAKVTIEEPTVEDSIAILTGLKGTFEKYHR
                     VRIGQAAVETAVTYAKRYLTSKNLPDSAIDLLDEASATVQNRVKGQAEETGLTSIDKA
                     LMDKKYKTVSKLLIKTKEDAEASQNYDLEVTKEDVLETLSRLSGIPVAKLSQSDTKKY
                     LNLEAELHKRVIGQEEAISAVSRAIRRNQSGIRTGRRPIGSFMFLGPTGVGKTELAKA
                     LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLL
                     FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF
                     GALDLSKDHKEVEKRIFEELKKAYRPEFINRIDEKVVFHSLTETHMQDVVKVMIKPLL
                     AVTAEKGITLKLQPSALKLLAKQGYDPEMGARPLRRLLQTKLEDPLAEMLLRGDLTTG
                     STLKVGVKGEELKFDVVK"
     gene            complement(18574..19032)
                     /locus_tag="AC1PJC_000199"
     CDS             complement(18574..19032)
                     /locus_tag="AC1PJC_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CtsR family transcriptional regulator"
                     /protein_id="HIP6619248.1"
                     /translation="MAMKNTSDYIEEHIKAILDQVSVAELRRSELASRFEVVPSQINY
                     VIKTRFTASRGYIVESKRGGGGYIRIGRITFSDKHELVHDLLNNMGEQLSATVYADIL
                     QLLFDEGLMTDREGNLFLSTGSDEILGKDASTIRARMMRQILRRLDRKEE"
     gene            19304..19642
                     /locus_tag="AC1PJC_000200"
     CDS             19304..19642
                     /locus_tag="AC1PJC_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HIP6619249.1"
                     /translation="MNFQDYIQDFTSVTVEQAQNLLAAKEGAVLFIGRSTCPYCNRFA
                     PKLHKVAQDKQVAVHFLDSSQISPELQTLRDHYQVSTVPDLLVAKPTGVQVRCDSSMT
                     EEEIAAFIEN"
     gene            19642..20343
                     /locus_tag="AC1PJC_000201"
     CDS             19642..20343
                     /locus_tag="AC1PJC_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family acetyltransferase"
                     /protein_id="HIP6619250.1"
                     /translation="MLDISYQANTFHISHHGRPIGKIHSYQNPYHQVNTYLRLDLVDY
                     DCTIAKQLFQSLQTFLEGKPLQIMLSSAEQERIHFLTAAGFVCKRKCYEFEVTKQDYL
                     SQTGTSNLSIVRKGTAPYQIACQQIFDHYQTVHQDINPWTASQEEFEKGLPDLVYTDS
                     KNYAFIDTDEIAYICGKDEQTFDTFIQTVICQLFEQYEQISFEVDDCDPIAMHLADQF
                     RQPNKPSWDTYILEI"
     gene            complement(20604..21644)
                     /gene="tsf"
                     /locus_tag="AC1PJC_000202"
     CDS             complement(20604..21644)
                     /gene="tsf"
                     /locus_tag="AC1PJC_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000808079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HIP6619251.1"
                     /translation="MAEITAALVKELREKSGAGVMDAKKALVETEGDIEKAIELLREK
                     GMAKAAKKADRVAAEGLTGVYVDGNVAAVVEVNAETDFVAKNAQFVELVNTTAKVIAE
                     GKPADNEAALKLAMPSGETLEEAYVNATATIGEKISFRRFALVEKTDAQAFGAYQHNG
                     GRIGVISVVEGGDETLAKQISMHIAAMKPTVLSYTELDEQFVKDELAQINHKIEQDNE
                     SRAMVDKPALPLLKYGSKAQLTDEVIAAAEEAIKAELAAEGKPEKIWDKIIPGKMDRF
                     LLDNTQVDQAYTLLAQVYIMDDSKTVEAYLNSVNASVVEFARFEVGEGIEKASNDFEA
                     EVAATMAAALGK"
     gene            complement(21800..22576)
                     /gene="rpsB"
                     /locus_tag="AC1PJC_000203"
     CDS             complement(21800..22576)
                     /gene="rpsB"
                     /locus_tag="AC1PJC_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HIP6619252.1"
                     /translation="MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQ
                     QTVKLADQAYEFIRDAAANDAVILFVGTKKQAAEAVKDEAIRAGQYFINHRWLGGTLT
                     NWGTIQKRIARLKEINRMEEDGTFEVLPKKEVALLNKQRARLEKFLGGIADMPRIPDV
                     MFVVDPHKEQIAVKEAKKLGIPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMA
                     DAIIEGNQGEDSVAAVEAELAAEPASTESIEELVEVVEGK"
     gene            complement(22771..26403)
                     /locus_tag="AC1PJC_000204"
     CDS             complement(22771..26403)
                     /locus_tag="AC1PJC_000204"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619253.1"
                     /translation="MSKTKNHIEKMEPLLADLRARELEEKQPILEDLYKLYQEQPDET
                     TALIYAKGLLNLTAFQELSDCETSVNRLSELSSRFPDDSAIAMVYAQGLVNLTVKQGL
                     EGCEQTVKELANLPSRFPDDSDIALVYAQGLVNLSAKQDLLGHEQTVGELWHLSTCFS
                     EYPFIALEYAKGLVNLTVEQDLEGCEQTVKELATLFSRFSEDSSIALAYAKGLVNLSA
                     KQDLLGREQTVGELWHLSIRFSEDLFIALEYAKGLVNLTVKQDLEGCEQTVKELATLF
                     SRFSEDSSIALAYAKGLVNLSAKQDLLGREQTVGELWHLSTRFSEDPFIALEYAKGLF
                     NLTVKQDLEGCEQTVKELATLSSRFPDDSDIALVYAQGLVNLSAKQDLLGREQTVGEL
                     WHLSTCFSENPFIALEYAQGLFNLTVKQDLEGCEQMVKELATLFSRFSEDSSTALAYA
                     QGLVNLSAEQDLLGREQTVGELWHLSTRFSEDPFIALEYAQGLFNLTVKQDLEGCEQT
                     VKELATLSSRFPDDSDIALEYAQGLVNLSAEQDLLGREHTVKELATLSSRFPDDSDIA
                     LVYAQGLVNLSAKQDLLGREQTVGELWHLSIRFSEDPFITLEYAKGLFNLTVKQDLEG
                     CEQTVKELATLLSRFSEDSSTALAYAQGLVNLSAKQDLLGREQTVGELWHLSIRFSED
                     PFIALEYAKGLVNLTVKQDLEGCEQTVKELATLSSRFPEDSSIALVYAQGLVNLSVEK
                     ELGEQREISDKLEEILKQFPKSIGIAEQTARLQLIIGGKEEGKEVAKVAFAQALSYMN
                     DRFPKKHHSLLERFLMFFSQGNEEKLCLLIETLLESEFIDLLNGIEATAIIKATDCYF
                     YTSENWANVREFLSVCKEQLSESKYAYWLDMLHKAKDKDIDHLFKATKACKTILHLLR
                     VNQKDLTHLSHYTALETLPKILLGEKDDDGRMIRKNGKVEMAGRYRFYNANYMNDPEE
                     GKLLHKWLEAEEENVDQVSPFYLMSLTTESDHLPMWVQYGRDGKGICVTLHDDLFEVK
                     NSLAEHELIARANDLKLQEYEEEADSQDEQKTSSSKEAERFAPYRICYMSDTNLYGNL
                     FKPDELEKIEKELANLKDIFAASSQKKEIYQIMEEIRFLFKSADYVTENEVRLLKYAD
                     LKSDKILLDETGDGVPRLYVEQGGHVKIKKITFGPKIYNESKIVPYIKFCDPEIEIGV
                     SGIHFR"
     gene            26543..26613
                     /locus_tag="AC1PJC_000205"
     tRNA            26543..26613
                     /locus_tag="AC1PJC_000205"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:26575..26577,aa:Cys,seq:gca)
     gene            complement(26656..31734)
                     /locus_tag="AC1PJC_000206"
     CDS             complement(26656..31734)
                     /locus_tag="AC1PJC_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HIP6619254.1"
                     /translation="MKQKWSQIENKQRFSIKKLSVGVASVSIGFFITGVPMVQADTSG
                     EGLESTVAVATDMDSKQDSVVEKKEDGPLSDEPVNTDQVDEPVAEEGVVEEVVDTEAD
                     EEPGLSVDRAAIEIKTTAGKTTDESKEKEDISGKEASAPQTSPQESPVEPEEVTRGRY
                     ILQFSDENRNLVLDKLKKIDGVKIVHEYKEVLTGASVEVGKESLSDVKAIAELTSLEE
                     SRRIRPTLHTAKQLVGALKASSKYQTDGRGMVIAVIDSGLDIKHKDMRLDEGVVPKIK
                     EITPSTTGTYTLKVPHGYNYVSGNDNLYDDTHEPHGMHIAGTLAGNATDEEVASKQGI
                     DGIAPNAQLLVYKIFSNDPKNYKAETEDAAYAAIEDAIKHGADVISLSVGYYDSGLPG
                     NAYYTIAKRAAEKGIIITAAIGNAGASSSDTSFDLHTNNALGAVDTATTVGVAATPAV
                     IGVGSARNTHLVQREFMLNGQSFGYYPIGYTTLTEGKYEFVDAGNGRWEEVQGLDLAG
                     KVAVIKKDKFDLKDAVRNLKFKDVAGLVVINTDQGWNKDYYRTHQLLVDDKTLLSYSS
                     IWGISLSGEDGRRLLEVANQSQGNTGLVLKPTIGMKKLIEVPTVSGFSSWGPTVNLEL
                     KPEIVAPGEDVYATLNDNRYGSMSGTSMASPIVAGASALLLPRIRQMTPPEGMTRMDL
                     LRIILMNTATPLVDVLDSSGHALENSPRQQGAGLLQIDRAFETDVILHHRLKGGVELK
                     EIGRETEFEVTLENLGNQQRSFAISAGKVLTSHDVPVDRIGRSGKVVKEIHATEIKGS
                     SLHLSEQSIQLGPKEKKTIRLRLDAGEAKDQFAEGFIYFKSLTEGQSDISIPYFGFVG
                     DWSKERIVDAPAWETSSKLKLTSVLSSYKHNKSGRYIELGREKIQDNQSPLNPDNIAI
                     QNQHSDSQIGNAFVRFALLRDITNYDLDIVKEATEDAPVLRRIDTGTMLSRVRYVDYF
                     ESLSEYSKLRTPIELHRWDGKVYDASKDENIPAPEGQYFFRLRVKNKENGAYQYTYLP
                     VKIDNQKPEIVAIDTNRLTSHRELVVTAKDNNKVWEVRANLNGEDLLVEKVVDDAGQL
                     HYHLKEVELPLDAKNHLRVEVMDIAGNVVAVEKDLVAPVIQFKNLEDLMATRSKKTVE
                     IKANVSAQVSDVQANLDAQAVNHSLENGQLSLQIPEQSDGRHNFELILKDKDGKLIYT
                     KTLNYLVDNEKPTIDLDIEKDEEDEEVIQIGKNGRFTLKGKVSDNVSLPKDIKLYYSN
                     LDIGKGELKIIDVKEDGSFEQDFFKSDFPRAIMLTAVDEKGNKLKDLRINTSPESLDE
                     EEETEVPITVNNWLIDPIRFNKESLGRELDSGLVDFKKQEDGTYLFTFEIEAETEQAH
                     SVRINGGEKRYFEDGKLTYPVTLIEEGNVVDISVYNEADELTYTKKYQMLVDTENPVL
                     QLENEVLPLERQVVDSEEDEDEENQYAGVLLADADGHLTLTGSAKDNGIYWSLKINED
                     FVARGGFWRQYGNNEKAFRYELHSLKDGDTVKLDLSDSFGNALVKKYKVRLNDKEVSE
                     QVPEKDLHVEQSDKDQAPSIPILKSEAHVPMPKEENSFAPQTESTEIALLTGDTREDG
                     VEHLVRLTKHEEALGISDERIEVSIPHREFFERSGRGETGALAADTSGKLPQTGDSLG
                     SVFISALLGLFGGAMTLGNLKRKE"
     gene            complement(31876..32415)
                     /gene="nusG"
                     /locus_tag="AC1PJC_000207"
     CDS             complement(31876..32415)
                     /gene="nusG"
                     /locus_tag="AC1PJC_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000887149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HIP6619255.1"
                     /translation="MYDSFDKGWFVLQTYSGYENKVKENLLQRAHTYNMLENILRVEI
                     PTQTVQVEKNGEVKEVEENRFPGYVLVEMVMTDEAWFVVRNTPNVTGFVGSHGNRSKP
                     TPLLEEEIRQILVSMGQTVQEFDIDVKVGDTVRIIDGAFTDYTGKITEIDNNKVKMVI
                     SMFGNDTIAEVNLSQIAEL"
     gene            complement(32525..32701)
                     /gene="secE"
                     /locus_tag="AC1PJC_000208"
     CDS             complement(32525..32701)
                     /gene="secE"
                     /locus_tag="AC1PJC_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HIP6619256.1"
                     /translation="MKFIKDIIRILKDTSWPTRKQSWTDFVSVVEYTAFFVAVVYLFD
                     LILSRGIMSLINLF"
     gene            complement(32711..32863)
                     /gene="rpmG"
                     /locus_tag="AC1PJC_000209"
     CDS             complement(32711..32863)
                     /gene="rpmG"
                     /locus_tag="AC1PJC_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015912025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HIP6619257.1"
                     /translation="MALKKASLACTVCGSRNYSISLSSNPKPTRLEVNKFCKHCGQYT
                     VHKETR"
     gene            complement(32897..35110)
                     /gene="pbp2a"
                     /locus_tag="AC1PJC_000210"
     CDS             complement(32897..35110)
                     /gene="pbp2a"
                     /locus_tag="AC1PJC_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein PBP2A"
                     /protein_id="HIP6619258.1"
                     /translation="MDDLQHQPIEVPEDFQIDHEDRPSRRRRGNRGSIDKPKKKSRIP
                     EPIRKFWRRYQLTKILIILMVLTVLTVGGYLFFLAKTANVGDLQQALKATTIIYDKDG
                     AEAGTLSGQKGTYVELDAVSDNLENAVIATEDRSFYKNSGINYQRTILAALTLGRSGG
                     GSTITQQLAKNAFLTQDQTISRKAREFFLALEINKKYSKQEILTMYLNNAYFGNGVWG
                     VEDASQKYFGIPASDLTLEQAAVIAGMLKGPEIYNPYYSLENAVNRRDTVLQNMVNAG
                     YIDQATADAGFQVDLASQLSDTYTGKQSNYSYPSYFDAVIAEAIERYGLKESDIINNG
                     YRIYTEMDQNSQASMQVIFNDETMFPTSSFDGTHAQAASVALDPRTGGVRALVGRVNS
                     SEDAVFRTFNFATQAKRSPGSTIKPLVAYAPAVAAGWSIDMALDNHTETYGDYTLHNY
                     DYSTSDTIPMYQALALSYNLPVAYIVNTLGIDKAFEYGQKFGLDMENVEKVLGVSIGS
                     GVETNPLQMAQAYATFANKGVMKDAHLITRIETASGKVLAEHRETSTKVIDRSVADKM
                     TAMMLGTYTNGTGVTADAANYYIAGKTGTTETSFDVNLVNDQWHIAYTPDLVISQWVG
                     FEQTDENHYIDSSSYWKAPSVFQTVANSILPYTAGTQFEVENAYAQNGIVEVAPDEAT
                     QTESSLGQEQVQEISDQAKNLIEQTKQNLIDAQLPERAKTLWDNITSWFGELSNP"
     gene            35263..36231
                     /locus_tag="AC1PJC_000211"
     CDS             35263..36231
                     /locus_tag="AC1PJC_000211"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000081018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HIP6619259.1"
                     /translation="MTQVYDITIIGGGPVGLFAAFYAHLRQAKVKIIDSLPQLGGQPA
                     ILYPEKAILDIPAFPSLTGQELTDNLLAQLAPFDTTICLNETLIAIEPGEVISLTTNK
                     GSHQTKTLIIAMGGGAFKPRPLEIDGADNFDNVHYHVSNIQQYADKDIVVLGGGDSAV
                     DWSLAFEKIAKTTQIVHRRDNFRALEHNVEELKQSSVTIHTPFIPKGLSGENGRASAI
                     DFDKVKSEDKLTLSFDHLFVNYGFKSSVGTLKEWGLELNRHRIVVNSKQETSVPGIYA
                     IGDCCFYEGKIDLIATGLGEAPTAVNNAMNYLNPNEKVQPKHSTSL"
     gene            36233..37102
                     /locus_tag="AC1PJC_000212"
     CDS             36233..37102
                     /locus_tag="AC1PJC_000212"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HIP6619260.1"
                     /translation="MKIDIRIPQAFPQLTVKEVLEDYFLIPRKIRHFLRTKKHVRVNG
                     ELINWQSPIAAGDLLELTFDQEDYPEKSIPLGQADLVKELYQDEHLIIVNKPEGMKTH
                     GNEPTEIALLNHVSAYVGQTCYVVHRLDMETSGAILFAKNPFILPILNRLLEDKVIYR
                     DYLALCQGQLKKTDWIITDKIGRDRHDRRKRVVDNRKGQVALTQVRLLKTLGKNSLVS
                     CRLQTGRTHQIRVHLAHHGHALIGDPLYSRVVAPRLMLHAQKLSLTHPLTLEEISVEA
                     RSESFEKVLKNMK"
     gene            complement(37312..38157)
                     /locus_tag="AC1PJC_000213"
     CDS             complement(37312..38157)
                     /locus_tag="AC1PJC_000213"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619261.1"
                     /translation="MKKTVWNASLEESTGVVTDQYIQTSMEDIEKNGFGKKILGFLTV
                     EFFIFLISFIGPYSDKEVGNILFVEAKILFSIPVWLGLLVIVHYLMDVRKIRHNRILS
                     YYYFNWNMFLMVSLLNYQVFILCAIGSAMFFGSLIAVILNLSIIIFVIAERYLWFKKE
                     VLNGLYGNQSVSNPLNDVMEKFVVLGRKYGGLIVFPFVLFRLFLPNQGEGIYQNDLLR
                     NLVMVFAVVLPVFGFYFIVAIVFSCIQGFYINKYMEDYRILSGYSIEDWYGKKSKRYK
                     ESLGK"
     gene            complement(38318..38404)
                     /locus_tag="AC1PJC_000214"
     CDS             complement(38318..38404)
                     /locus_tag="AC1PJC_000214"
                     /inference="COORDINATES: protein motif:HMM:NF025153.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4176 domain-containing protein"
                     /protein_id="HIP6619262.1"
                     /translation="MVTPEETYFFNQENIVAVVFRGYVNIDE"
     gene            complement(38631..39245)
                     /locus_tag="AC1PJC_000215"
     CDS             complement(38631..39245)
                     /locus_tag="AC1PJC_000215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619263.1"
                     /translation="MIMGLTGCNKEAEIRTELAPMYEVLDQQSIENFDILSIEDSLRI
                     YGMESAKGFQTDLTINSDGQFEGMSYDLSVSETEGYPTTYIDGELKINTTSEVLVNRK
                     LMFEEFHFSEDYFNNLELVKVLDHPNTYMKDMSYQEKTPSDYTKKLIETYGLTDPTVA
                     KIEVSKTRHDEKTFSYILTYSLYDEADIEIIRVFKFVMEDIEDE"
     gene            complement(39290..39571)
                     /locus_tag="AC1PJC_000216"
     CDS             complement(39290..39571)
                     /locus_tag="AC1PJC_000216"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619264.1"
                     /translation="MSYTDFIKLYQESLKVGVQLIIGAQKSSLLKTDLSIKYIKENLV
                     TAIVAQRLYDQSIVQHKMTSREETLKVDEVYLYHDQDYQKVKISKQVAE"
     gene            complement(39568..40899)
                     /locus_tag="AC1PJC_000217"
     CDS             complement(39568..40899)
                     /locus_tag="AC1PJC_000217"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619265.1"
                     /translation="MGSKSDAELVQEFYPTLESDYSQIKNSTWQEENKEALGLVDTGL
                     KILAGIALAAGTVMTGGAALPLALAGGAYLFADGAHSAITGNTLITGTQLSTEERIWA
                     GAEAVVTLATLGSFAAGQGALRAGKQILTTVQTIGKLAGYADEGVELGQLASGILSGD
                     GTNATLNYIGGKAFEGIVEGSVKGLQSQLSHIEVSSPSQIQLNARQGQDFVDLQTVEF
                     GKIASKVENKTVDGVEQKIRVDAIGFDEAGNIRIQEYTTAQNGLKISRQNLLEDLSKY
                     GGTIVGAGKGDFVGGVEIPKGTRIDIISQKTRNFSIDSTPNYIQVGRYTTELSKIDLP
                     LEEKVIRLQEFYSDLSDKTDINVPSDPQYVVAVRDGWVEYDWPENLGYQEGTVQSITR
                     DSGLPDQWDRFGHMGGGNFSDIPSDGPYTYSQRAIPYVENPNAYHKGTFIR"
     gene            complement(41125..41658)
                     /locus_tag="AC1PJC_000218"
     CDS             complement(41125..41658)
                     /locus_tag="AC1PJC_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005591454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6572 domain-containing protein"
                     /protein_id="HIP6619266.1"
                     /translation="MLASVTLDGRLGNPNFYEVHEEDKRWLHANFGKPTEEKQWGVIY
                     NFEKIQIMAEVDPRGMDAQITFRLRKDSPILDTTTIDSIGVVDGHLELLLADGNEWLP
                     DTEQDHLLKLQEKLNNYIHFIESKQYVDSYGDDFTEKVINLTFQYAPSDNGLAFLVQV
                     QKVLQPTDIRLKVVVPE"
BASE COUNT        11886 a        10207 c         7750 g        11830 t
ORIGIN      
        1 gatttttgta tcgtcgtttc gtttactttt aagtctaaac aacaagctaa accctgtcct
       61 aaaccggaaa tatgcaagta acatctcttc actcgtcgaa gcaattcacg atacataaaa
      121 attatgatat caacaaagtc ttggctatca tcaaccaagt ctttttctgt tattcatttt
      181 cttttgtaag gatttgaagg gtttcaagga gttggtccac atggacttcc acagtatcac
      241 ctgtgccctt gatcttcact tcgacgatgc catcagctgc tttcttacca acagtcacac
      301 ggattggcaa gccaatcaag tcactgtcag agaacttaac gccgacacgc tcattacggt
      361 catctgtcaa gacttcatag cctgcaccaa ccaaacttgc ttcgatagac tgagtcaagg
      421 ccattgcttc ttcatctttg acattaactg gaatcaaatg cacatcaaac ggtgccaatt
      481 ctttagggaa gttgatgccc caggcgtaac ggtattcacc ttttggtgtc ttgttaacaa
      541 agagacgagc gtgttgctca agaacggctg acaagaggcg gctaacaccg attccgtagc
      601 atcccatgat aatcggcata gaacgaccat tttcatccaa gatgttggca ttcatgctgt
      661 ctgaatagcg tgtaccgagt ttgaagatgt gaccaatctc gataccacgg gcaaagttga
      721 gaacaccgtg tccatctgga gaaggctcgc cttctttgac ttcacgaatg tccacatact
      781 cagtcacttg gaaatcacgg cccacattgg cacctgtgta gtggaaacca tcttcgttgg
      841 caccgacaac agcatttttc acatcttgaa ccttgcggtc tgcaataatt ttgatgtctt
      901 ctggcaagcc gactggtcca agggaaccaa aacctgcacc gaagattttt tccgcatccg
      961 ctgggcctgc tacatcaaag aaatctgctc caaggtggtt tttcaacttg acatcgttaa
     1021 cctgatcatt gccaacaagg agggcaacaa ctggctcacc gtctgccata aagagcatgg
     1081 ttttgatggt ttgttcttcc acaatattca agaaggcagc aacttcgtcg atggttttgg
     1141 catctggtgt cgctacttta accaagtctt cttcgacgac aactgctgta cttggtttgt
     1201 actcgctagt tgccatttct aggttggcag cgtagcctga ctcgctagag taggcgatgg
     1261 tgtcttcacc agacacagac catgccaaga gttcttcctt gatagcttca agaacatcct
     1321 ctgggatttc ttcaaaagaa gcaactgact tgtccaagac aacccaacgg tccaggtcag
     1381 tacggtctgg tgtaatagcc ataaactcct ggctatcctt accacccatg gcaccaccgt
     1441 caccgataat ggccttgaac tcaaggcctg cacgagtgaa aatagcctcg taagctgcct
     1501 tgtagtcatc gtaggtctgg tccaagctct cataactagc atggaagctg taaccgtctt
     1561 tcatgatgaa ctcgcgacca cggagaagac cgttacgagg gcgcttttca tcacgatact
     1621 tagattggat ttggtagatg ttaagcggca actgcttgta agactggacc gcatcacgcg
     1681 ccaaaagagt caccgtttct tcatgagttg gtcccaagat aaagtcagaa ccttcgcggt
     1741 ttttgagctt gtaaagatcg tcaccatatg tttcgtaacg acctgactca cgccaaatgt
     1801 ccgctgacaa gagagctggt gccaaaaatt caatggcatc aatcttatca aactcctcac
     1861 gcatgatatt ttttgctttt tcaatcacac ggttagccaa tggcaagtag ctgtaaatac
     1921 cagcagaaat ctgacggaca taacccgcac gtaacatcaa agcgtggcta atcaccgacg
     1981 catccgaagg catctcccgc aaagtaggga taatcatttt agactgtttc ataatttaag
     2041 atacaaaagc gtcaagaaaa ccgtataaaa ataggtaatc aacgcagtgc ctataggcac
     2101 aaggcgattg gtctttttta ctaggttttt agcttttgtt caattccttt cgtagtttac
     2161 ttgattggaa gacaaagaat taacttttca aaaccctcgc tgacgctcga gttcaaatct
     2221 gaaaactctc tattcctttc tttttcgtag ttttcagaat atcctgcgtt cagcacgcat
     2281 tcaattcctt tcttatattc atcatcagga aatccagagg cgtagctctc aatctatttt
     2341 ccgagttttt agaccgagtt caattacgaa cctcctctgt tcctttcatc ttttgtttat
     2401 caggaatgca caggtctcag cccgcattca attcctttcg tatttttcag aacatcctgc
     2461 gttcagtacg cattcaattc ctttcgtatt tttcagaata tcctgcgttt agcacgcatt
     2521 caattccttt cgtaaatttc aaattatttt agaagaagac tcttataata tcattccaag
     2581 tgactactat cataagaacc accataacgg ctacacctgc cagcgtgata taggattctg
     2641 tttctggttt aagtggtttt ttgcgaatgg cttccagaat attcataaca atcttaccac
     2701 catccaaggc tggaattgga atcaaattga agattccaag gttaatggag agcgcagcca
     2761 ttagccccaa tacagaaacc aaaccaaatt cagccgcttg agaacttact ttataaatag
     2821 caaccggtcc ccccaactgc ttaacatcaa agtttgcaat taggttcttc aaagctgtca
     2881 caaccctaag agctgtcgct cccgcttctt ggaaaccacc gacaatttta tcaacgaaac
     2941 cagttttcaa aatcggtgaa ataccaattc gataggcccc atctacttgt tcagcagtaa
     3001 cggagacatg acggtttttc ccatcatgct caacaaccaa atcaaagctt ggggctgttg
     3061 ttgcatctgt cgctgctttg ctaataatcg ttgcaacttc tgtgtagctg tctgtcgtgt
     3121 tcccattgac cgaaagaatc ttgtcccctg tgacaacacc tgccgcctgc aaagcaccac
     3181 cttcagtaat acttactgca ttgcttgatg ggttggcaac cccgccttgc atgaagaaca
     3241 aaataataaa tactagaatc cctaaaataa agttattcat gggacccgca aagttggtca
     3301 tcaaccgtcc ccagactgtc gcattttgat actgaacatc aagtggagca atccgaactt
     3361 ctgtcccatc ttcctctaca atcgtggcat cgtgatcaac cttataggtc ttgctttctt
     3421 ccaagaccaa gcctgtgatt tccaattttt cttcaaagtc aaaactggtt acattcattg
     3481 gcaaactgag actatccagt tgcttaccag acaaattaat ccgcgtcaca acaccagctt
     3541 cattcaagct gaggctggca ggactacctg tcttaatctc tgtcttatct tcaccccatc
     3601 cagccattcg aacatagcca cctaggggaa ggatacggat ggtgtaaagt gtcccatcct
     3661 tacctgtatg agcgaaaatt ttgggaccca tcccaatcgc aaattccctc acaaggatac
     3721 cagctttctt ggcaaagtag aaatgaccaa attcatggac aaccacaatc acaccaaata
     3781 taaatataaa tgctaaaatt cccttcatag tacctcctta aaataatcca aagaagtgca
     3841 tgattggaaa gacaaaaatc ataccgtcaa aacgatccag gataccaccg tgtcctggaa
     3901 taatttttcc agaatccttc acaccaaaat ggcgtttaat agcactttct actaagtccc
     3961 cgaattgtga gaatatcgag aaaatcacaa ctaacaacaa catcatgcca aatgaatagc
     4021 ccgccaacaa ggacttatcg acaatcaaga aaatgatagc aactaccacc gcagaaagaa
     4081 taccgcctac aaagccttca accgttttat tcggtgaaac cttcggcaat aattttctcc
     4141 gaccaatctg acgaccgatt aagtaggcac caatgtctgt tgcccagact aaacagaggg
     4201 caaagaagac tttattgagc ccatccatac gagccagtat caaactatga aagccgatac
     4261 caacatagaa acttgatgca attggaaaga ccacatcgga atagttgtaa tgcccaatat
     4321 taaaaaccgt cgaaccaagc agtaaaaata ctacaatagc gtaggctgtg taatttccat
     4381 ccgtcggtaa aaatgtcaga taattctgga gtggaagagc caagactaaa ctggccaaca
     4441 tagctaagac accctcgata gaatttggtg ctaggcgatg cattttaatc aattcagccg
     4501 tagcaatgat ggctaacagg cctacaaaaa attgaaatgc catcccacca gccaacaaaa
     4561 agggaatgaa aatagctaga gcaatgccgc caaatatcac tcgtttctgt aaatcgtttg
     4621 tcataccttc tccttataca ccgccaaaac gtctgtggcg acggttgtat tctttaatcg
     4681 ctaatttaag tgcttctcca tcaaaatcag gccaagcaat atctgtaaag tatagctcgc
     4741 tgtaggctgt ttgccacggc aggaagttgc taagacgaag ttcaccactt gtacggacaa
     4801 ctagatcggg atcgcgtaac gttggtgata aggttcctgt atagaggtaa tccgctatta
     4861 atttctcgtc aatatctcca ggattgaact tggcatccaa gacatcttgc gcaatagcct
     4921 tgactgcgcg agtcacctca tcacgaccgc catagttcag agcgaaattg agaatcaaac
     4981 cagtgttact ctttgtcttt tgttcagctt tataaagcgc attgagagtc ggaacaggaa
     5041 gtttggaatg gtcaccaatc atctgaattt tgacattatt ggcatggagt tcaggaacat
     5101 acttatcata aaactccaca ggtagattca tgataaactt cacttctttt tccggtcgag
     5161 accagttttc tgtagaaaag gcatagacag ttagcacctt tactcccaaa tcagaagccg
     5221 tcttggtaac cttttgaagt gcatccatac cagccttatg ccccataata cgtggctgca
     5281 tccgcttttt cgcccaacgg ccattgccat ccataatcac agcgatatgc ttagggactt
     5341 caattgcagt ttcaatgctt tctttctttt taaaattaaa tttaaacatg gtattttcct
     5401 tattgtataa tcgtttcatt ataccatatt tttacctagg atagcaaaaa tcaggcaggg
     5461 ctaaaacaag agaaaaccaa ggtttccctc ggtttttcat ccttattctt caattgcaga
     5521 ttctggagtt gcttctgtcg tttcaactgc cacttcttca acaactgccg atgtagtatt
     5581 cgaacttgct acacgattac gaatagcacc acgttcaaat gtcaaataaa caccatcaac
     5641 atcgagaaca acctttttat catcgatttc atcgacaata ccaaatagcc caccaatggt
     5701 cacaatttca tcaccttttt tgatttgatt tagtgcttct tgacgttgtt tttgttgttt
     5761 acgttgcgaa tagaacataa aaccaatcat ggcaaccatg acaagcggca aaaataaacc
     5821 ttccatttgt ttacctcttt tattgtttga taagcatgat tatatcaaat tctggacaag
     5881 aaagcaaagt tcgaccaaac agaaaaagac cgaactttcg ttcagtcttc gcacactatt
     5941 ttgcgctcca tacactctca aggatgttgg tctgttcacg accaggacct actgagaagg
     6001 ttgagatacg aacgcctacc aattcgctga tacgacgaac atagttgcga gccgcttctg
     6061 gcaattcatc caggctacgc acacctgtga tgtcttcaga ccaacctggc atttcttcgt
     6121 agagtggttt gcaacgtttg agttgctcca agcttgctgg gtagtggtca atacgctcac
     6181 catccaagtc ataagccacg cagattttca acgtttcaag acctgacaag acgtcaatcg
     6241 agttgaggga caagttggta atacctgaca cacggcggct atggcgcatc accactgagt
     6301 caaaccaacc gacacggcgt ggacggccag ttgtcgtacc gtattcctta ccgatttcgc
     6361 ggatacggtc tccgatttca tcgtgcaatt cagttgggaa tggtccgtca ccaacacggc
     6421 tagtgtaggc cttacataca ccaacaacct tgtcaatctt gcttggaccg acaccactac
     6481 cgatagtcac accaccagca actgggtttg aagaagtaac gaatggatag gtaccttggt
     6541 caatgtccaa cataacccct tgcgcacctt caaataagac acgcttgcct tggtccaaag
     6601 catcgttcaa aataacagat gtgtctgtta catatttctt gatttcttga ccgtaggcat
     6661 agtattcttc aaagatttcg tcaaactcaa tcggagttga ctcatacatc ttctcaaaca
     6721 aacggttttt ctcagccagg tttgttttca aacgctccgc aaaaatctcc ttgtccaaga
     6781 ggtctgcgat acggatacca acacgcgcag ccttgtccat gtaggctgga ccgataccct
     6841 tgttggttgt accaatcttg ttctcacctt tagactcttc ttgcaactgg tccaatttga
     6901 tgtgataagg caagatgaca tgtgcgcggt ctgaaatccg caaattatct gttgtcacac
     6961 ctgaatcatg gagatagttg atttccttca ccaaagattt tggattgaca accacaccat
     7021 taccgattac agaaatcttt tctgggaaga agattcctga cggaatcaag tgcaatttat
     7081 acttcgtgcc atcgataacg atagtgtgtc cagcgttatc accaccttga taacgtgcga
     7141 ttacttcagc attagcagac aagaagtctg taattttacc cttaccttcg tcgccccact
     7201 gggttcctac aacaactact gatgtcatat tcactctttc tctgaactgg ctaaccagcc
     7261 cagcctttct tctacttctg gcaggaatct cacctgcaag tttcgtttta cacactattc
     7321 tatcaaaaaa cgaacatttt ttcaagaaat tccaataatt tcatatatag cgaatgtttt
     7381 tattttttta aaagtatatt tcaaaaaaat ccgattaaac acacgagata gacatgtgta
     7441 aatatgcttt tgacagagaa atccgaagtc tttgtttgct ttcagtgatt ttcagtacat
     7501 ttttcaccag aaacgtagca gaaatttgta tttgctctcc aatctagata aaattggaat
     7561 aagactttga cagaaatata aaggacttag tatgttacaa aaattatcac caaacagccc
     7621 cattcttcag gctacttttg gaattgaacg cgaatcactt cgcatcaatt caaatcacag
     7681 agttgcgcaa actccccatc ctcataaact gggttctcgt agcttccacc cctatatcca
     7741 gacagactac agcgagccac agttagagtt gattacacca atcgctcagt cgacaaagga
     7801 agctcgtcgc ctactgggag ccattacaga tgttgccgca cgttctatgg acaggcaaga
     7861 atacctctgg cccctatcca tgccacctgt gatttcagaa gaagaaatcc aaattgctca
     7921 actagatagc gactatgagt accaatatcg tgtcggtttg ggggaacgtt atggcaagct
     7981 cgtccagtct atgtctggca tccattataa ttttgaatta ggaaaagact taacccaaca
     8041 actttttgaa ttaagcaagg aaacagactt tatcgcattc aaaaataccc tctacctcaa
     8101 attagcacaa aacttcctca actatcgttg gctcttaacc tacctatatg gagcaagtag
     8161 tctagccgaa aaaggattcc taactacgga agtcggttgc gtccgttcca ttcgtaattc
     8221 caagtacggc tatgtcaact ccgatgatgt tcatatttcc ttttcttctc tccaacagta
     8281 cgtggccgac atcgaacaag ctgtccaatc tggtcaacta tccgctgaga aggaatttta
     8341 ctcttccgtc cgactacgtg gagcaaagac tagccgtgac tacctcagca aggggatttc
     8401 ttatttagaa ttccgttcct tcgacctgaa cccctatgac ccgcttgcta ttagtcaaga
     8461 aacccttgat acagtccacc tctttatctt atctcttctt tggctagacc aactgacaga
     8521 tgttgataac accttagcaa aagcagataa acttaacaat ctcatcgccc tcagtcaccc
     8581 acacacacct ctacctagcg aggccgatgc catgccaatc ttgacggcca tgaaagccat
     8641 agttctacac tttggactgg atgactacta tggccagctc attgcacatg tggaggcctc
     8701 tcttcaagac ccacatctga ccctttccgg aaaaatagca gagcaggttg aagatgggtc
     8761 tctagaaaag tttggtcagc agcaaggaca ggtctttcat gactatgctt ggacagcccc
     8821 ttacgccctc aagggctatg aaaacatgga actctccacc cagatgattc tcttcgacgc
     8881 cattcagctg ggcttgaacg tggagatttt ggatgaagaa gaccaatttc tcaaactctg
     8941 gcatggtgac catgtcgagt acatcaaaaa tggcaacatg acctccaagg acaactacgt
     9001 cattcctctc gccatggcca acaaggtcgt gaccaagaaa atcttggacc aggctggttt
     9061 tccagtacct gcgggagctg aatttgcaaa caagacagac gccctgcggt actacggaca
     9121 ggtagccagc tctgctattg ttgtcaaacc aaaatccacc aacttcggcc taggcatctc
     9181 tatcttccag gagccagcca gccttacgga ctatgaaaaa gcccttgaca tcgccttttc
     9241 agaagacagc catgtactag tggaggaatt cgtggcgggg accgagtacc gtttcttcgt
     9301 cctggacggc aagtgcgagg ctgtcctgct ccgcgtcgca gccaatgtcg tgggggacgg
     9361 tagctcaacc atccgtgaat tggtggacca aaaaaaccaa gatccactgc gtgggcgtga
     9421 ccaccgttca ccgctggaaa tcattaactt gggcgatatc gaactgctta tgttagaaca
     9481 gcagggctac acacccgata cagttttgcc agagggcatt caagcctttc tacgtggcaa
     9541 ttccaatatc tcaacgggtg gtgactccat cgatatgacc gaccagatgg aagagtccta
     9601 caagcaactg gccgccgata tggcgactgc tatgggagct tgggcctgtg gtgtggactt
     9661 gattatcccc gaccgcacca agccagcaag caaagacgag cccaactgca cctgtatcga
     9721 actcaacttc aaccctgcca tgtacctgca cacctatact tacgcaggac ctggacaaag
     9781 cattacaccg aagattttga aaaaattgtt tccagagcta tagttttcca ttttccttac
     9841 tttgttagtg cttacttcaa agattcgtgg aacttttgaa ggctggagat agggcaaagc
     9901 acgttcgcct caatagctgc aggttgcaag aaccttctag gttggaaata agacttgcct
     9961 cgcaagtcac ttctgtatag tacggcaaag cgagttcaaa aaaatcagtg gattgtttga
    10021 agcgggaaag ccagaaacat agtccctctt gcgttgaagt aaaaaaagtc aactaaagaa
    10081 ctatatatct gctttgcccc tttgttcctt cacaaaacct cccaactaat gttaaataaa
    10141 atgaatatgg caccaagata atcatttata tcttggtgct tttttatgaa ctaatcccca
    10201 gcatcccgcc atatcgttcg ttatttgttt tattttccaa tgtattttta ctacttcatt
    10261 tgaatttttg aaaatatccg tattatatcc agaaaaagta ttccaaacga ctcatttttt
    10321 gttaaactat atgtatataa caacagcaga cgttttgata acgtccatat ataacaaaaa
    10381 ggagttttat atgaagatta gaaaacgttc tctcttctat accgtaggtt ctgtagcggt
    10441 aacagccgga ctcttgctta gtcttgccac ttcgcccata ccatctgtgc acgctactga
    10501 agtggcgata gagaattatc cgtcacttgc aataaccaag tcggaagtca cgatacaagg
    10561 ctatcttatt gcaccactta atagtagcgg aaccgctttt gacgctacta acaaaacaaa
    10621 tctagccctt ggtgcaagca tggatactgc ggccgccgac actatcccta ttcaactaaa
    10681 agaacctctt cgcagccaat tcaacctcgt tgatcatccc gaactagtcg gaaaattggt
    10741 tcgcatcaca ggaactagcg atacatacat gaagcgagct gggatcaaac cagctacagc
    10801 gattgaaatc gtagattcat cttctactaa tgttcagcca ccaaccagtg aaaatacgac
    10861 taccgagtca aatgaccttg tttctacacc gattgctact gttcgctctg gtgcacaagg
    10921 aacagagtac acagtttctg gtaaaattat tagcctagta aacggttggg gaggaaatgg
    10981 tttttacctc cagggttctg acggtgctgg tatctatatc taccctgggg ctgccttggg
    11041 ctatcagcct ggtgatacag tccaattaac aggaacattg ggtgagtata aaggcgaact
    11101 ccaactaacc gcagttagca accacaaggc tatatctgag catttcaacg ctcccattac
    11161 agaaacaaac atcgctcagt tagcaacgca agcacaggca acactagttt ctctaaaaaa
    11221 cttgactgtc ggagatattc aaagcgatag ctatcaaaat tctaccttta ccgtaactga
    11281 ttccgaggga caaactgtgg atgtgcgttt agatagtcga acaggtatca aaacggctga
    11341 tcttttgaac catatcaaca agggagataa gattaatcta accgctattt tatccaccta
    11401 taatggaaaa atacaattaa aaccatttga cctctctcat tttgaagtcg ttgaaaaggc
    11461 aacaacagaa acagcacctg gcaagaccga aactgtaaca gtcggtcaaa ttcaaggtgc
    11521 aagtcaccaa tcacctctaa ccaatcaatc tgtgattctt aaaaacgtcg tagtaaccta
    11581 cgttacctct gccaataact tctacgtgca agatgtcaca ccagatggag acgtcaaaac
    11641 atctgacggt attaatattt ttactgacaa attaaaaaca aatgtcaagg taggagatct
    11701 tgtcactatc gcaggacgtg tagaagaata cctcggaaaa ggttatacag aacgtgggga
    11761 aacagactta accatcacac aaattcgagc tactgaagta actgtggatg ggactgcacc
    11821 tgtaccatct cctatagtcc ttggtcttga tcggaccatc ccagcagata ttattgacaa
    11881 cgacggtttg gctcaatttg atccagaaca agatgcgctc gatttctggg aatccgttga
    11941 aggcatggtg gttgccgtgg atgatgcaaa aatccttggc ccactaaaaa acaaggaaat
    12001 ctatgtcact cctgccacta gtcaacttcc tttaaataac gttggaggcg tcaaccttcg
    12061 ccctgaaggg aataatacca atatcattcc actccttttg aaaaatggaa aacagatcgt
    12121 caaatcagga gactatttca ccggtcgtat cgctggacca gttacctact cttacaccaa
    12181 ttataaagtc tatgtagatg atagcaccct tccaaccttg cacgaaggag ctacaaaacc
    12241 agaaacaaca accattatcc caaatgatga caagctgact atcgcttctt ataacattga
    12301 aaacttttct gctgacagta agtcaacatc agacgctaaa gtccaacgca ttgccaaatc
    12361 ctttgtttca gacctacatt ctccagatat tatcggattg attgaagtgc aggacaacaa
    12421 cggtgctaca aatgacggca caactgatgc tagtaagagt gctgagcgcc taattgcagc
    12481 cattcaagca gccggcggac caacctatac ctatgtggat attgctcctg aaaacaacaa
    12541 agacggcgga caagagggtg gcaatattcg cgtcggcttc ctctacaact caaaacgtgt
    12601 cagcctatct gacaaaccaa tcggtaccgc aacacaggca gttgcatggg aaaacggcga
    12661 actcaatctc agcctgggcc gaatcgaccc aaccaaccct gcttgggcag ctgtccgcaa
    12721 aacacttgca gctgaattcg tcttcaaagg tgagaaagtc gttgtccttg ccaaccatct
    12781 caactcaaaa cgcggtgaca atggtctcta cggaaaaatc caacctgtca gcttcaagtc
    12841 cgaagaaaaa cgccacatac tagcacaaac tatcgctgac tttacaaaag caggcttagc
    12901 tcaaaatcca aatgctaata tcgttatgct aggcgacttc aatgactatg aatttactaa
    12961 aaccatagaa attttagaaa caggaggaat ggctaacctc gttagtcgtc acgatgcatc
    13021 agatcgcttc tcttacttct ataacggaaa caatcagtct cttgacaata tgctagtatc
    13081 aactaacttg ttggagcgct atgcctttga tatggtccat gtcaattcag cctttatgga
    13141 agaacatggc agagcttctg accacgatcc actattggta caactggatg tgacaaaggc
    13201 acaagaacca agcgacaagc agacagatga ctcaggaaca gtcaataata gtgatgacaa
    13261 tggtacgacc aacaataaca agccaacaaa tctttcaact tctaatcaaa cagctgtaaa
    13321 tgctgatgac cgttctggcg ctacagacaa gggacaaaca accgtgaccc ctactgccaa
    13381 caacagtcaa aagaaaatcc ttccaaagac aggagaagaa acaagctttg tacttatcac
    13441 aatcggtctc gtaatcttga gcgcctgcct tgtcaaaaaa caaaaagaat cctaatcatt
    13501 ttttgagctt gaaagcatga ctttcaggct catttttcta ctgctccacc tccacttgtg
    13561 ctataattaa agttatggat aaaattatta aaacactatc aaaaagcggg cattttcgtg
    13621 cctttgtgct agatagcaca gaaaccgtga aaacagccca agaaaaacac gacaccatgg
    13681 cgtcgtccac cgttgctctg gggcgcaccc tcattgccaa tcagattttg gctgccaacg
    13741 aaaaaggcga caccaagatc accctgaaaa tcttggctag cggtgccgtt ggagctatca
    13801 tctccgttgc caataccaaa ggacaggtca agggctacat acaaaaccct gacttagact
    13861 acaaacggac agcgactggc gaagtcatcg ttgggcctct tgtgggcaac gggcaattcc
    13921 tagtcatcac agactacgga acaggtcatc cttacaactc catgacaccc ttaatctctg
    13981 gtgaaatcgg tgaagacttt gcttacttcc taacagacag ccagcagaca ccatctgcgg
    14041 taggactgaa tgtattgctg gatgaagaag acaaggtcaa ggtagctggt ggcttcttgc
    14101 tacaagtttt accaggcgcg accgaggctg aaattgcccg tttcgagaaa cgcatccaag
    14161 aaatgcctgc catttcaagc ttgctggctt ctgaaaacca catggaagct ctgctatccg
    14221 ccatttatgg cgacgacgac ttcaaacgcc tgtcagaaga agaaatcggt tttgtctgcg
    14281 actgctctaa agaccgcttc ctcgatgctc tagcaagctt gccaaaagcg gacctgcaag
    14341 agatgaaaga agaagacaag ggcgtggaca tcacctgtca attctgccag acccattacc
    14401 actttgacaa aaacgatttg gaggaactca tcaatggcta atctcaacac tcctttcatg
    14461 attggtgatg tggaaatccc caatcgctgc gtgctggccc caatggctgg cgtgaccaac
    14521 tcggccttcc gcaccattgc aaaagaaatg ggcgctggcc tggtcgttat ggaaatgatt
    14581 tctgaaaaag gccttctcta caacaacgag aagaccctcc atatgctcca tatcgacgac
    14641 aacgaatacc ccatgtctat ccagcttttc ggtggtgatg ccgaaggact aaaacgggct
    14701 gccgacttca tccagaccaa taccaaggct aatatcgtag atattaacat gggctgccct
    14761 gtcaacaagg ttgttaaaaa cgaagctggt gccaagtggc tcaaggaccc cgacaagatt
    14821 taccacatca tcaaggaagt gacctcagtc ctcgatattc ccttgactgt taaaatgcgg
    14881 acgggttgga acaataccga cctagcggtc gaaaacgccc tggccgcaga aagtgccggt
    14941 gtgtctgccc tggccatgca cggacggacc cgcgagcaga tgtacacagg aactgttgac
    15001 ctggaaaccc tcaccaaggt ggctggcagc ctgaccaaga ttcctttcat cgcaaacgga
    15061 gacatccgca atgtagaaga tgcccgccag cgaatcgaag aagtcggtgc cgatgctgtc
    15121 atggtcggac ggactgccat gggaaatcct tatatattca atcaaatcaa ccactatctt
    15181 gaaacaggag aagtcctgcc cgacctctcc tttgacgaca aactcaatgt cgccttcgac
    15241 cacctgaccc gattgaccaa tcttaagggt gagtccattg ccgttcgtga attccgtggt
    15301 cttgcccctc actacctccg tggttcagca ggtgcagcca aaatccgtgg agccgttgcc
    15361 cgagcagaga ctatcgagca ggtccaagaa ctatttgacc aggcacgaga agcctatcag
    15421 gaacggattg ctaaataaga taaacaggca ggctaaaact cgctaacaat gaaacagaaa
    15481 aacgcataaa gccaagatga taacttgatt ttatgcgttt tttctgtatg agcacattat
    15541 tcctgctcag caaaaaagtt aacaaaggca ggggcaatgt agtctcgata cttctctgga
    15601 ttctcacgaa tgagggtcgc tgaaatacca aattttctag gactgaaatg cgcttgatag
    15661 cctcgactgt gcagttcctg agcgtattct tcctcagaca catagaaaac tggtacttga
    15721 tgttctgaca agtccaataa accaagcagg cggtctagcc aaaggtccca accagctgga
    15781 tagggaggca aagccgtttc atccagggca cgaacttcga caaaatcatc accctcaaac
    15841 tgggattgaa tagctctaaa gcgagtcaat aaatccaagc caatcaagtc gccacgatcc
    15901 ctatcatagc ccgacaccac gacacaaact tgaccacaat ccaactttgc tcgctcgatc
    15961 aaatccaaat gtcccttgtg catgggggca aaggttccga aaacgactgc tacagtttgt
    16021 ttcatacctt gcctttctca tccgaaacta tatgattgcg gcaaataaag ccctcacaat
    16081 ctgctgctaa aagcagtctt agttcaagca ttttaccacc tatttgacca catcaaactt
    16141 gagctcttca cccttgaccc caaccttcaa ggtcgaacca gtagtcaagt caccacggag
    16201 caacatctct gccaacggat cttccaattt ggtttgtaag agcctacgta gcggacgagc
    16261 tcccatttct gggtcataac cttgtttagc caataactta agggctgacg gttgcagttt
    16321 aagagtaatt cctttctcag ctgttacagc caacaaaggt ttaatcatga ccttgacaac
    16381 atcctgcata tgagtttccg ttaggctatg gaagacaact ttctcgtcaa tgcggttgat
    16441 aaattctgga cgataggctt ttttcaattc ctcaaaaatg cgtttctcca cttccttgtg
    16501 gtccttagat aaatcaaggg caccaaaacc aactgtctta tcatcacgaa gggctgttgc
    16561 tccaaggttt gacgtcatga taataatagt atttgagaaa tcaaccttac gtcccttact
    16621 gtccgtcaga acaccatcat ccaagacctg caagagaaca ttgaaaatat ctggatgagc
    16681 cttttcaacc tcatcaaaaa gaagaacaga ataaggtttg ttacgaactt tttctgtcaa
    16741 ttcaccacct tcttcataac caacatagcc tggaggggca ccattgagac ggctggccgc
    16801 aaatttctcc atatactcag acatatcaaa acggataaga gcagattcat catcaaagag
    16861 aacctccgcc aaggctttag caagctctgt cttaccgaca ccagtcggtc ccaagaacat
    16921 aaaggaacca atcggtctgc gacctgtacg aatccctgac tgattacgac gaatagctct
    16981 gctaacagca gaaatagctt cttcctgccc aatcactcgc ttgtgcaatt ccgcttccag
    17041 attcagatac ttcttagtat ctgattggct aagcttggct actgggatac ctgacaagcg
    17101 gctaagtgtt tctaaaacat cttcttttgt tacttcaagg tcatagtttt gactagcctc
    17161 ggcatcttct ttcgttttaa tcaaaagctt gctgacagtc ttatattttt tatccatcaa
    17221 ggccttgtct atgctcgtca gtcctgtttc ctcagcctgc cctttcactc gattttgtac
    17281 cgttgcactg gcttcatcca gcagatcaat ggctgaatct ggcaggtttt tactggtcaa
    17341 ataccgctta gcgtaggtca cagcagtctc tacagctgct tgtccaatac ggaccctgtg
    17401 gtatttttca aaagtacctt taagccctgt caaaatggca atactgtcct caactgtcgg
    17461 ctcttcaatg gtcactttgg caaaacgacg aaccagggct gcgtctttct caatatgctt
    17521 ttggtactct gtctgagtcg tcgctccgac cgtacggagg gtaccacgag caagagctgg
    17581 tttgaggata ttggctgcat ccaaggtcga atcaatccct gagccagaac ccataatggt
    17641 atgcaactca tcgatgaaaa ggatgacttg accatcttcc tcaatgtcgt tgatgatatt
    17701 attcatccgc tcttcgaaat caccacggaa acgagttcca gcgataacat tcatcaagtc
    17761 aagttccaaa acacgcatct tagccaagct gacagggaca tcacctgcag caacacgttg
    17821 agcaagaccc aaagcaagcg cagtttttcc gacaccagca tcaccaacta gaactgggtt
    17881 attcttggtt ttacgtgata gaatttggat catccgtgca atctcagcgt ctcgaccgat
    17941 aacaggttca atcttccctt cacgcgccaa agctgtcaaa tcacgagtgt agtcttctaa
    18001 tccaccactt tgaggtgctg ggggcattcc catcatctgt cccatattag taggtttggc
    18061 tttgccaccc ttcatcacac tgcggatagc tttaaggtcc tctttggtaa atcccgcacg
    18121 tgcctccaag tttttacgca aatccaagaa acgaaactta tcatctgagt cttcaaaaca
    18181 aaaacctacc ttgtccaaaa tctgactagc tgttgaccgc ttgtccaaca acatagccat
    18241 aaacaaatgt tccgttccca gctccttatc cttgacgact tctgcaattt tcttggcaaa
    18301 actagccgtt tcatccaaac gtttagaaga tggtaaaata cgaaaactat ccaactcttc
    18361 acgatagacc ttgtcggtca caacaaaagt tgcatgttca tagtcagaaa ttgaaatagg
    18421 atattctgcc aaaacagcgc cagcgactgt atcatggttg ataacgagag acaagagaac
    18481 atgccaggtt tccaagtaat cacaggcata acgttgagcc actaactggg catcttcaaa
    18541 aacccgctgt aaaccagttg aaattttcat gaattattcc tctttcctat ctaaacgtcg
    18601 tagtatttga cgcatcatgc gtgctcgaat agtacttgca tcttttccta atatttcatc
    18661 agatcctgtg gacaaaaaga gattgccttc tcgatctgtc atcaatcctt catcaaaaag
    18721 gagctgtaaa atatccgcat aaaccgtcgc agacaactgc tcacccatat tgtttaacaa
    18781 atcatggacc agttcgtgct tatccgaaaa ggtaatccgc ccaattcgga tataaccacc
    18841 accaccacgc ttactctcaa caatatagcc acggctggct gtaaaacggg ttttaatgac
    18901 gtagttaatc tgacttggca ccacttcaaa ccgactggcc aattcacttc gacgcaactc
    18961 agctacactg acttggtcca agatggcttt gatatgctct tctatataat ccgatgtatt
    19021 cttcatcgcc atagtaccgc ctctttcttt gactatcttt gaccattata ccttaaaatg
    19081 acgaattttg aaagcaaaag cctagcaact ggcgtagcag aattttgaaa tctgctctgc
    19141 tttatcctat aataaaagaa aaaaaacaga aaggactagg gcttccgtat ttagttgagc
    19201 tgaatacggg ctacggacta ggccaaaaag ataaatgaga actagtcgtc gttctgtttc
    19261 ccattttttc tgtgtccgct taaggccctt tatatcttat accatgaact ttcaagatta
    19321 cattcaagac tttacaagtg tgactgtgga gcaggcacag aaccttctag ccgccaaaga
    19381 gggggctgtt ctcttcatcg gacgtagcac ctgtccttac tgcaaccgtt ttgcaccaaa
    19441 actccacaag gtcgcacaag acaagcaagt ggccgttcac ttcctcgact ccagccaaat
    19501 cagtccagaa ctccaaaccc ttcgcgacca ctaccaagtt tctaccgtcc cagatctcct
    19561 cgtcgctaaa cctactggcg tccaagtccg ctgcgattcc agcatgacgg aagaagagat
    19621 tgcagcgttt attgagaact aatgctagac atttcctacc aagccaacac cttccacata
    19681 tctcatcacg gaagaccaat cggcaagatt cacagctacc aaaatcccta ccaccaagtc
    19741 aatacctatc ttcgactgga tttggtcgat tacgattgca ccatagcaaa gcagctcttc
    19801 cagtccctac agactttctt agaaggtaag cctctgcaga ttatgctctc ctctgcagag
    19861 caggaaagaa tccatttcct taccgcagct ggctttgtct gcaagcggaa atgttatgag
    19921 ttcgaagtga ccaagcaaga ctatctcagt caaacaggca cttccaactt aagcatagtc
    19981 cgcaaaggca ccgcacctta tcaaatagcc tgccagcaaa tttttgacca ctatcaaaca
    20041 gtccaccaag acatcaatcc ttggactgcc agtcaagaag aatttgaaaa gggcttacct
    20101 gatctggttt atacagactc aaaaaattat gccttcatag ataccgatga aattgcctac
    20161 atttgcggaa aagatgaaca aacttttgat acctttatcc aaacagttat ttgccaacta
    20221 tttgaacagt atgaacaaat tagctttgag gtcgatgact gcgatcctat cgccatgcat
    20281 ttagctgacc aattccgaca accaaataag cctagctggg acacttatat tttagaaatc
    20341 taacaaaaag caccgaccac aaggccggtg ctttttaagg agattatgaa aaatatttag
    20401 gattgataat agtataaccg aatcaagcat atccgacatc cgccctaaga ctgattttat
    20461 aaaaagaacc ccctttcgga agttcttgaa ttgtcgagta gtctttcagt ttgcttttag
    20521 tacgaggcaa cgagccgtag gctgtactga agtacggcaa ggcgagttaa cgaagtaata
    20581 aaagataaaa tgaagactac caattattta ccaagagctg ctgccatcgt agctgcaact
    20641 tctgcttcaa agtcgtttga agctttctcg ataccttcac ccacttcgaa acgagcaaat
    20701 tctacaactg aagcatttac tgagttcaag taagcttcaa ctgttttgct gtcgtccatg
    20761 atgtaaactt gtgcaagaag tgtgtaagct tggtcaactt gagtgttgtc aagcaagaag
    20821 cgatccattt tacctgggat gattttgtcc cagatttttt ctggtttgcc ttctgctgcc
    20881 aattctgctt tgatagcttc ttcagctgct gcaatcactt cgtcagtcaa ttgagctttt
    20941 gaaccgtatt tcaacaatgg caatgctggt ttgtcaacca ttgcacggct ttcgttgtct
    21001 tgttcgattt tgtggttgat ttgtgccaac tcatctttaa cgaattgctc atccaattca
    21061 gtgtaagaaa gaacagttgg tttcatcgca gcgatgtgca ttgagatttg ttttgcaaga
    21121 gtttcgtcgc caccttcaac aactgagata acaccgatac ggccgccgtt atgttggtat
    21181 gcaccaaatg cttgagcatc tgttttttca accaaagcaa agcgacggaa tgagattttc
    21241 tcaccgatag ttgcagttgc gtttacgtat gcttcttcaa gggtttcacc tgaaggcata
    21301 gccaatttaa gagctgcttc gttgtcagct ggtttacctt ctgcaattac tttagcagta
    21361 gtgtttacca attcaacgaa ttgagcgttt ttcgcaacga agtctgtttc agcgttaact
    21421 tcaacaactg ctgctacgtt accatcaacg taaacaccag tcaaaccttc agctgctaca
    21481 cggtcagctt tcttagctgc cttagccata cctttttcgc gaagcaattc gatcgctttt
    21541 tcgatatcac cttcagtttc aaccaatgct tttttagcgt ccataacgcc agcacctgat
    21601 ttttcacgca attctttaac gagagctgct gtaatttctg ccatgtctat tctccttgtt
    21661 tgtatttata aaatagagga gcgggctcag ccctgcccct ctaggattgt ttttgtgttt
    21721 gataaatgat gtagaatgta ctcggactaa aaagctagaa tttagataaa tctaacgctt
    21781 ttcttaacgc cttcgttact tattttcctt ctacaacttc aaccaattct tcgattgatt
    21841 ctgtagatgc tggctcagct gccaattcag cttcaactgc ggctacgctg tcttcacctt
    21901 ggttaccttc gatgatagcg tcagccattt tagctgtgat caatttaaca gcgcggatag
    21961 cgtcatcgtt agctgggatg ataacatcga tatcatctgg atctgtgttt gtgtcaacca
    22021 tcgctacaac tgggataccc aattttttag cttctttaac agcgatttgc tctttgtgtg
    22081 ggtcaactac gaacattacg tctggaatgc gtggcatgtc agcgataccg cccaagaatt
    22141 tttcaagacg agcacgttgt ttgttcaaca atgctacttc tttcttagga agcacttcga
    22201 aagttccatc ttcttccata cggttgattt ctttcaaacg agcgatacgt ttttggattg
    22261 taccccagtt tgtaagagtt ccacccaacc aacggtggtt gatgaagtat tgaccagcgc
    22321 ggatagcttc gtctttaaca gcttcagcag cttgtttttt agtacctacg aacaagataa
    22381 ctgcgtcgtt tgctgcagcg tcacggatga attcgtaagc ttggtcagcc aattttacag
    22441 tttgttgcaa gtcgataacg tggataccgt tacgctctgt gaagatgtat ttagccatct
    22501 taggattcca gcgacgagtt tggtgaccga agtgtacacc agcctcaaga agttgtttca
    22561 ttgaaattac tgccatgagt atttctcctt tttgtttttt ctcctctccc gaacttcgac
    22621 ttgcagccca acctttcggc aacaagacca caattggtcc gagatgagta tttgttgcac
    22681 agcaactcta ttatgatacc aaaaaaacta acaattttca agtgaaatat ttacttttat
    22741 catctgccca cctcagacat ccgacaagaa ctatctgaag tggattccag acactccgat
    22801 ttcaatttct gggtcacaaa acttaatgta gggcacaatc ttggactcgt tgtagatctt
    22861 tggtccaaag gtgattttct tgattttgac atgtccaccc tgctcgacat agagtcgcgg
    22921 aactccatct ccagtctcat ccagcaatat cttgtcactt tttaggtcgg catactttaa
    22981 tagacgaact tcgttttcag tcacataatc tgctgattta aagagaaaac ggatttcctc
    23041 cattatctga taaatctctt tcttttgaga tgaagctgcg aaaatatctt ttaaattcgc
    23101 caactctttt tcgatttttt cgagttcatc tggtttaaat aaattaccat acaaattcgt
    23161 gtcagacata taacagattc gatagggagc aaagcgctct gcctctttgg aagacgaagt
    23221 tttttgttca tcctgactat ctgcttcctc ttcatattct tgcagcttca aatcgtttgc
    23281 cctagcaatc agctcgtgtt ctgctaggct attttttact tcaaacaggt catcatgtaa
    23341 ggttacacaa atcccttttc cgtctctacc atactgaacc cacatgggca agtgatcaga
    23401 ttctgtcgtc aggctcatca gataaaaagg actcacttga tcaacgttct cttcctctgc
    23461 ctctaaccat ttatgcaaca acttgccctc ttcagggtcg ttcatatagt tggcattgta
    23521 gaagcggtaa cgacctgcca tctcaacctt gccattcttt ctaatcattc ttccatcatc
    23581 atctttttca cccaacaaaa tctttggaag ggtttcaaga gcagtatagt gactcagatg
    23641 agtaaggtct ttttggttga cacggagaag atgaagaatg gtcttgcagg ctttggtcgc
    23701 cttaaacaaa tggtcaatgt ccttgtcttt agccttatga agcatatcta gccagtaagc
    23761 atacttgctc tcactaagct gctctttgca gactgataaa aattctcgga catttgccca
    23821 attttctgaa gtataaaaat agcaatcggt tgctttaata attgcagtgg cttcaattcc
    23881 attcaaaaga tcgataaatt cggactctaa caaggtttcg atcaataaac agagtttttc
    23941 ctcattaccc tgtgagaaga acattaaaaa acgttccagc agcgaatgat gtttctttgg
    24001 gaaccgatca ttcatgtatg aaagggcttg ggcgaaggct acttttgcca cttcttttcc
    24061 ctcttcctta ccaccgatga tcaactgaag cctagctgtt tgctccgcaa ttccaataga
    24121 ctttggaaac tgtttaagta tttcttcaag tttatcagaa atctctctct gttctcctag
    24181 ctctttttca acgctcaaat ttaccaaacc ttgagcatat accagagcga tagatgagtc
    24241 ctctggaaag cggctagaca aggtagccag ttcttttacc gtttgttcac aaccctctaa
    24301 gtcctgcttg actgtcaagt ttactaaacc tttggcatat tccaaggcaa tgaacggatc
    24361 ttcggaaaag cgtatagaaa gatgccacaa ttctccaact gtttgctcac gacccaataa
    24421 atcttgttta gcactcaggt tcaccaaacc ttgggcatat gccagagcag tagaggaatc
    24481 ctcggaaaag cggctaagca aggtagccag ttcttttacc gtttgttcac aaccctctaa
    24541 gtcctgctta actgtcaagt taaacaaacc tttggcatat tccaaagtaa tgaacggatc
    24601 ttcggaaaag cgtatagaaa gatgccacaa ttctccaact gtttgctcac gacccaataa
    24661 atcttgttta gcactcaggt tcaccaaacc ttgggcatat accagtgcaa tatctgagtc
    24721 atcaggaaaa cgactagaca aggtagccag ttcttttact gtgtgttcac gacccaataa
    24781 atcttgttca gcactcaggt tcaccaaacc ttgggcatat tccagtgcaa tatctgagtc
    24841 atcaggaaaa cgactagaca aggtagccag ttcttttacc gtttgttcac aaccctctaa
    24901 gtcctgctta actgtcaagt taaacaaacc ttgggcatat tccaaggcaa tgaacggatc
    24961 ttctgaaaag cgtgtggaaa gatgccacaa ttctccaact gtttgctcac gacccaataa
    25021 atcttgttca gcactcaggt tcaccaaacc ttgggcatat gccagagcag tagaggaatc
    25081 ctcggaaaag cggctaaaca aggtagccag ttcttttacc atttgttcac aaccctctaa
    25141 gtcctgctta actgtcaagt taaacaaacc ttgggcatat tccaaggcaa tgaacggatt
    25201 ttctgaaaag catgtagaaa gatgccacaa ttctccaact gtttgctcac gacccaataa
    25261 atcttgttta gcactcaggt tcaccaaacc ttgggcatat accagtgcaa tatctgagtc
    25321 atcaggaaaa cgactagaca aggtagccag ttcttttacc gtttgttcac aaccctctaa
    25381 gtcctgctta actgtcaagt taaacaaacc tttggcatat tccaaggcaa tgaacggatc
    25441 ttcggaaaag cgtgtggaaa gatgccacaa ttctccaact gtttgctcac gacccaataa
    25501 atcttgttta gcactcaggt tcaccaaacc tttggcatat gccagagcaa tagaggaatc
    25561 ctcggaaaag cggctaaaca aggtagccag ttcttttacc gtttgttcac aaccctctaa
    25621 gtcctgcttg actgtcaagt ttactaagcc tttagcatat tccaaggcaa tgaacagatc
    25681 ttcggaaaag cgtatagaaa gatgccacaa ttctccaact gtttgctcac gacccaataa
    25741 atcttgttta gcactcaggt tcaccaaacc tttggcatat gccagagcaa tagaggaatc
    25801 ctcggaaaag cggctaaaca aggtagccag ttcttttacc gtttgttcac aaccctctaa
    25861 gtcctgctcc actgtcaagt ttactaaacc tttagcatat tccaaggcaa tgaacggata
    25921 ttctgaaaag catgtagaaa gatgccacaa ttctccaact gtttgctcat gacccaataa
    25981 atcttgttta gcactcaggt tcaccaaacc ttgggcgtat accagtgcaa tatcagagtc
    26041 atcaggaaaa cgactaggca agttagccag ttcttttacc gtttgttcac aaccctctaa
    26101 gccctgcttg actgtcaagt ttaccaaacc ttgggcatat accattgcga tagctgagtc
    26161 atcagggaaa cgactagata actcagatag gcgatttaca cttgtttcac aatcggataa
    26221 ttcctgaaag gctgttaaat taagcaagcc tttagcataa atcagagcag ttgtctcatc
    26281 tggctgttct tggtacagtt tgtataagtc ttccagtata ggctgtttct cttctaattc
    26341 tctagccctc aagtcagcca gaaggggttc catcttttct atatgatttt ttgttttaga
    26401 cataggaaca tctctttcat ttttctacta tcaatatagc ataaattttc cctgatttct
    26461 attaggaatg gtagattttt acaggacttg tcattctcgt gttgactttc ggcttttttt
    26521 tcggtaaaat agtttctgtt acggcggtat agccaagtgg taaggcacgg ctctgcaaaa
    26581 gcttgatcgt cggttcaaat ccgtctaccg ccttttaata ttctaaaaaa cctaggattc
    26641 ttcctaggtt ttttgctatt cttttcgctt cagatttccg agggtcatag ctccaccaaa
    26701 tagacctaac aaagcactta taaagacact tccaaggcta tccccagttt gaggcagttt
    26761 cccactagta tctgccgcta atgcacctgt ctctcctctt ccgcttcttt caaagaattc
    26821 tctgtgaggt atggacactt ctattctctc gtcagaaatt cctagtgcct cctcatgttt
    26881 tgtaagtctc accaaatgct ccacaccatc ttctcttgta tcgccagtta acaacgcgat
    26941 ttcagtggat tctgtttgcg gagcaaacga attctcttct tttggcattg gtacatgcgc
    27001 ttccgatttc agaataggaa tgctaggggc ttgatcctta tctgattgct ccacatgaag
    27061 gtctttttca ggaacttgct cagatacttc cttgtcattt aaccgtacct tatatttctt
    27121 cacaagagca tttccaaaac tgtcactcaa atcaagtttg actgtatccc cgtctttcag
    27181 actatgtagc tcatagcgaa aggctttttc attatttcca tactgcctcc agaagcctcc
    27241 tcgagctaca aaatcttcgt tgatcttcaa ggaccaataa attccattat ccttggcgct
    27301 tccggtaagt gtcaagtgcc catcagcatc tgccaggaga actcctgcat actgattttc
    27361 ctcgtcttca tcttcttcac tatccactac ctgtctttcc aatggtagca cctcattttc
    27421 cagctgtaaa acaggatttt ctgtatcaac caacatctga tatttcttcg tgtaagtcaa
    27481 ctcatccgcc tcattgtaca cacttatatc cacaacattt ccctcttcaa tcagggtaac
    27541 tggataggtc aacttcccat cctcaaaata gcgtttttca ccaccattga tgcgcacaga
    27601 atgagcttgt tcggtttctg cttctatttc aaatgtaaat agataagtcc catcttcttg
    27661 ctttttgaag tcgaccaacc cgctatctag ctcacgacca agactttctt tattgaaacg
    27721 aatcgggtca atcagccagt tattaacagt aatcggaact tctgtttcct cctcctcatc
    27781 cagactctct ggacttgtat tgatacgaag gtcctttaat ttattgccct tctcatctac
    27841 cgcagttaac atgatggctc taggaaaatc agatttaaag aagtcttgct caaaactgcc
    27901 gtcttctttt acatctatga ttttcagctc tcccttacca atgtctagat tggaatagta
    27961 aagtttgatg tccttaggaa gactaacatt atcactcact ttccccttca atgtaaaacg
    28021 cccgttttta ccaatctgga taacctcttc atcctcttca tctttttcaa tatcaagatc
    28081 aatcgtcggc ttttcattat ctaccaaata attcaaggtt ttagtgtaaa taagcttgcc
    28141 atccttatct ttcaagatta attcaaaatt atgacgtcca tctgattgct ctggaatctg
    28201 gagagatagt tgaccattct ccagagagtg attcacagcc tgagcatcca agttagcctg
    28261 cacatcggaa acttgcgctg agacgttcgc tttaatttct acagttttct tactgcgagt
    28321 tgccatcaaa tcttccaaat ttttaaactg gattacaggc gccaccaagt ctttttcaac
    28381 agcaaccaca ttacccgcta tatccatcac ctcaacacgg agatgatttt tagcatcgag
    28441 tggcagttcc acttctttga gatggtaatg tagttgacct gcatcatcta caaccttttc
    28501 aacaagaaga tcttctccat ttagattagc tcgaacctcc caaactttat tattatcctt
    28561 ggctgtgacg actagttctc tatgactagt cagacgattg gtatcaatcg cgacaatctc
    28621 tggtttttga ttatcaattt tgactggcag ataggtatac tgataggccc cattttcttt
    28681 attttttacc cgcaatctaa agaaatattg tccttccggt gctggtatgt tttcatcctt
    28741 acttgcatcg tacactttcc catcccaacg gtgcaattct atcggagtac gaagcttgga
    28801 atactccgaa agactttcaa aataatctac atagcgaaca cgagacagca tagttcctgt
    28861 atcaattcgc cttaaaacag gagcgtcttc tgtagcttct tttacaatat ccaaatcata
    28921 gttggtaata tccctcaata gcgcaaatcg aacaaaggca ttcccaatct gactatccga
    28981 atgctggttt tgaattgcga tattgtctgg attgagaggc gattgattat cttgaatctt
    29041 ttcacgccca agttcaatat agcgcccaga cttattgtgt ttatagctag ataaaaccga
    29101 ggtcagtttc aatttagaac tggtttccca agccggtgca tcaacaatcc tttcttttga
    29161 ccagtcaccc acaaagccaa aataaggaat gctgatgtca gactgcccct ccgtcaatga
    29221 tttgaagtaa ataaaccctt ctgcaaactg gtccttcgct tctcctgcat ccaatctcag
    29281 gcgaatggtt ttcttctctt tcggccccag ttgaatagat tgctcagaaa gatgaagact
    29341 cgaacccttg atttctgtcg catgaatctc tttaactact tttccagaac gtcctattct
    29401 atcaacagga acatcgtgac tagtcaatac tttccctgct gaaatagcaa agcttctttg
    29461 ttggttcccc agattttcca aggtcacctc aaattctgtc tcacgcccta tttcttttaa
    29521 ttccacccct ccttttagac ggtggtgaag aatcacgtct gtttcaaagg ctctatcgat
    29581 ctgcagcaga ccagcacctt gttgtctcgg agaattttcc aaagcatgcc cagatgaatc
    29641 cagaacatca accaaagggg tagcagtatt catcaaaatg attctcagca aatccatcct
    29701 agtcatgcct tctggtggtg tcatttggcg aatccgtggc aataaaagtg cactggcacc
    29761 cgccacaatt ggcgaagcca tcgaagtccc tgacatggag ccataacgat tgtcgttcaa
    29821 ggttgcataa acatcctctc ccggcgccac aatctctggc ttcaattcta agttgaccgt
    29881 aggaccccaa ctagaaaagc ctgatacagt tggcacttca atcaacttct tcattccaat
    29941 tgtaggttta agaaccaaac cagtgttacc ttgcgattgg ttggcaactt ccaataatcg
    30001 ccttccatct tccccgctaa gactaattcc ccagatagag gaataggaaa gcaaagtctt
    30061 atcatctacc aataactgat gggtcctata ataatcctta ttccatccct gatctgtgtt
    30121 tatcacaaca agtccggcaa catccttgaa tttcaaatta cgaacggcat ctttcaagtc
    30181 aaacttatct tttttgataa ccgctacttt accagccaaa tcaagcccct gcacttcttc
    30241 ccaacgacca tttccagcat ctacaaattc atattttccc tctgtaagcg ttgtatagcc
    30301 tataggatag tagccaaaag actgtccatt cagcataaat tcacgttgaa caagatgggt
    30361 atttctcgcc gaaccaaccc cgataactgc gggagtcgct gccacaccaa ctgttgttgc
    30421 cgtatccaca gctcctaagg cattatttgt atgcaagtca aaggaggtgt ctgaagagga
    30481 ggcaccagca ttaccaatag ctgctgtaat gataatcccc ttttctgctg ccctcttagc
    30541 aatcgtgtag taagcattcc ctggcagccc gctatcataa taaccaacac tcaaactaat
    30601 gacatctgcc ccgtgtttga tagcatcttc aatagcagca taagcagcat cctccgtctc
    30661 agccttataa tttttagggt catttgaaaa aatcttgtag actagcagtt gtgcgttggg
    30721 agcaatacca tcaatcccct gtttagacgc aacttcttcg tctgttgcat ttccagccag
    30781 agttcctgct atgtgcatac catgtggttc gtgggtatca tcgtagagat tatcgttacc
    30841 agatacgtaa ttatagccat ggggaacttt cagtgtgtat gtccctgtcg tagatggagt
    30901 aatttccttg attttaggga cgacaccttc atccaacctc atgtctttgt gcttaatatc
    30961 caaaccagag tcaatgactg caatcaccat tccgcgacca tctgtctggt atttagaact
    31021 tgcttttaag gcaccaacca gctgtttagc agtatgaaga gtcggtcgga tacggcgact
    31081 ctcttctaaa gaggttaatt cggcaattgc cttcacatca gacaaacttt ctttccccac
    31141 ctctacagat gctcccgtta aaacctcctt atactcatga acaattttaa cgccatcaat
    31201 tttctttaat ttatccaata caagatttcg gttctcgtcg gaaaattgta aaatataccg
    31261 ccctcttgtc acctcttctg gctcaaccgg tgattcctgc gggcttgttt gaggagcact
    31321 agcttctttt ccgctaatgt cttctttttc ctttgactca tctgttgtct taccagctgt
    31381 agtttttatc tcgatcgcag ctcgatctac ggaaagaccc ggctcttcat ctgcctctgt
    31441 gtctacaact tcttcgacca ctccttcttc agcaactggt tcatccacct gatccgtgtt
    31501 aactggctca tctgataatg gtccatcttc ttttttctct accacagaat cttgcttgct
    31561 gtccatatcc gttgcgaccg caaccgtaga ctccaatcct tctccactag tatctgcttg
    31621 aaccatcgga acacccgtga taaaaaatcc tattgatacc gatgccacac cgacacttaa
    31681 cttcttgatg ctaaagcgtt gtttattctc aatttgagac cacttctgtt tcataaaacc
    31741 tccgttttta agattgatta atttataagt taggcatacc taattctata aaatttttaa
    31801 atctttggca agtttttttt gagttagcct caaaaacaag aaaaagcaca ggtctccctg
    31861 cgctttaaca acttattaca actcagcaat ctggctcaaa ttaacttcag caatggtatc
    31921 attaccaaac atagagataa ccatcttaac cttgttgttg tcgatttctg tgattttacc
    31981 tgtgtagtcg gtgaaggcac cgtcgatgat acgaacagtg tcgccaactt tgacatcaat
    32041 atcaaattct tgaacagttt gtcccataga caccaagatt tgacgaattt cttcttccaa
    32101 aagtggagtt ggttttgaac ggttaccgtg tgaacccacg aaacctgtaa cgtttggcgt
    32161 gttacgaacc acaaaccaag cttcatcggt cataaccatc tcaaccaaaa cataaccagg
    32221 gaaacggttt tcttccactt ccttgacctc accgttcttt tcaacctgaa cagtctgagt
    32281 tggaatttct acacgaagga tgttttccaa catgttataa gtgtgggcac gttggagcaa
    32341 gttttccttc actttatttt catatcctga gtaggtctgc aaaacaaacc agcctttatc
    32401 aaaactatcg tacattgtta cttcctttct ttggaaacac ggaattttta gacgctaaaa
    32461 aaagcccgaa ggctttcgct tttccttatt atatcacttc cattttacaa atggcaagta
    32521 ttttctagaa aagattaatc aagctcatga ttcctcgtga caaaatcaag tcaaagaggt
    32581 aaaccaccgc tacgaaaaag gcagtatatt ccactacaga cacgaaatcc gtccagctct
    32641 gcttacgagt tggccaagac gtatctttta aaatgcggat aatgtctttg ataaatttca
    32701 tgcgcgactc ctatctggtt tccttgtgaa cagtgtattg tccacagtgt ttacaaaatt
    32761 tatttacttc taaccgtgtt ggcttgggat tgctcgaaag gctgattgaa tagtttcgag
    32821 aaccacaaac agtacaggct aggcttgctt tttttagtgc cataaagccc tccatccttt
    32881 tcattctacc atgtttttat ggatttgaca actctccaaa ccaagacgta atgttatccc
    32941 acaaggtttt tgctcgttct ggtaactggg catcgattag attttgtttg gtttgctcaa
    33001 tcaagttttt cgcctgatct gaaatttctt gtacctgttc ttgaccaagg cttgattcag
    33061 tttgcgtagc ttcatctgga gctacttcta caataccatt ttgtgcatag gcattttcta
    33121 cttcgaactg agttccagca gtatatggca agattgaatt ggccacagtc tggaagaccg
    33181 acggagcctt ccagtagcta ctgctatcta tataatgatt ttcatctgtc tgctcaaaac
    33241 caacccactg actgatgacc aaatcaggtg tgtaggcaat atgccactga tcattgacaa
    33301 gattgacatc aaaactcgtt tcggttgttc ctgttttccc agcaatataa taattggccg
    33361 catctgctgt cactcccgta ccattggtat aggttccaag catcattgct gtcatcttat
    33421 ctgcgacaga gcggtcaatc accttggtac ttgtttctcg atgctctgct aaaacctttc
    33481 cactagctgt ttcaatacga gtgatgaggt gggcatcctt catcaccccc ttattcgcaa
    33541 acgtagcgta ggcctgggcc atttgcagag gattagtctc cactccagaa ccaattgaaa
    33601 cacccaaaac tttctcgaca ttttccatat caagtccaaa cttttgtcca tactcgaagg
    33661 ctttgtcaat ccccaaggtg ttcactatat aagctactgg taaattgtaa gagagagcca
    33721 aagcttgata cattggaatg gtatcagaag tcgaataatc atagttatgc aaggtgtaat
    33781 cgccgtaggt ttctgtatgg ttatccagag ccatatcaat cgaccagccc gccgctactg
    33841 ctggagcata ggcaacaaga ggcttgattg ttgaaccagg actgcgcttg gcttgtgtcg
    33901 caaagttgaa agtccgaaag accgcatcct ctgaactgtt aactcgacca accaaggcgc
    33961 gaactccacc agtcctagga tcaagagcta cgctggcagc ctgagcatgg gtaccatcaa
    34021 aacttgatgt tgggaacata gtctcatcat taaaaatcac ctgcatgctg gcttgagaat
    34081 tttgatccat ctctgtgtaa atcctatagc cgttattaat aatgtctgat tctttcagtc
    34141 cgtatcgctc aatcgcctca gcaatcacag catcaaaata ggatggatag gaataattgc
    34201 tttgtttccc tgtataggta tctgaaagct gactggctag gtctacttgg aaacctgcat
    34261 ctgcagtcgc ctgatcaata taaccagcat tgaccatatt ttgcaggact gtatcccgac
    34321 gattaactgc attttctaga gaataataag gattataaat ctcaggtccc ttgagcatac
    34381 ctgctatgac ggccgcttgc tcaagagtaa gatcactggc tggaataccg aagtactttt
    34441 ggcttgcatc ttccactccc cagaccccgt ttccaaagta ggcattgtta aggtacatgg
    34501 tcaggatttc ttgcttactg tactttttat tgatttccag agccaaaaag aattctcgag
    34561 cctttcgact gatggtctga tcctgagtta gaaaggcatt ttttgccaat tgctgggtaa
    34621 tagttgaacc acctccagac cgacctaacg tcaaggcagc taaaattgta cgctggtaat
    34681 taatacctga atttttgtag aagctccgat cttctgtagc gataacggca ttctctaaat
    34741 tatcagagac ggcatccagc tctacatagg tccccttctg accagacaat gtcccagctt
    34801 ccgcaccatc tttatcgtaa ataatcgttg tggcttttag cgcctgctgt aaatcaccaa
    34861 cattagctgt ctttgcaagg aaaaatagat agccacctac tgtaagaact gtcaggacca
    34921 ttaaaatgat taaaatttta gtcagttgat aacggcgcca aaatttacga atcggctccg
    34981 gaatacgtga ttttttcttt ggtttatcaa tagagccacg atttcccctg cggcgacggc
    35041 taggtcggtc ttcatgatca atttggaaat cttctggaac ttcaatcggc tgatgttgca
    35101 aatcgtccat actttacctc tttctagtga attttgtacc attatacacc atttcctaaa
    35161 aactagcaga aaaaagcctg cgataacttg tgacaacaga cagggaattt tttccaaaaa
    35221 tatgataaaa tagggtcatt ctgaacaaag aagaggattc ccatgacaca agtatatgac
    35281 attactatca tcggtggcgg accagtcggt ctcttcgccg ccttctacgc tcatctccgt
    35341 caagccaagg tcaaaatcat tgactccctt ccccaactgg gtggccagcc tgccattctc
    35401 tatcctgaga aggccatttt agacattccg gcctttccaa gcctgacggg acaggagttg
    35461 accgacaacc tccttgccca actggctcca tttgacacca ccatctgcct caatgaaacc
    35521 ctgattgcca ttgagccagg agaggtcatt tccctgacaa ctaataaggg cagtcaccaa
    35581 accaagaccc tgattatcgc catggggggt ggggccttca agcctcgtcc gctggagatt
    35641 gacggtgccg acaactttga caacgtccac taccacgtgt ccaatatcca gcagtatgcc
    35701 gacaaggaca tcgtcgtctt gggtggcggt gactctgcgg tcgactggtc tctagccttt
    35761 gaaaaaatcg ccaagaccac ccaaatcgtc caccgacgcg ataacttccg agccctcgag
    35821 cacaacgtgg aggagctcaa gcagtccagc gtcaccattc acacaccttt tatccctaaa
    35881 gggctttctg gggaaaatgg cagagcttct gccattgatt tcgacaaggt aaaaagcgag
    35941 gacaagctca ccttgtcttt tgaccacctc tttgtcaact acggtttcaa atcatctgtc
    36001 ggcacgctga aagaatgggg cttggagctc aatcgccacc gcatcgtggt caacagcaag
    36061 caagaaacct ctgtccctgg catctatgcc atcggtgact gttgcttcta cgagggcaag
    36121 attgacctga ttgcgactgg actgggcgaa gccccaaccg ctgttaacaa tgccatgaac
    36181 tacctcaatc caaacgaaaa agtgcaacca aagcactcga ccagcctata agatgaaaat
    36241 tgacattcgt attccccaag cctttccaca actgactgtc aaggaggtct tggaagatta
    36301 ttttctcatt cccagaaaaa ttcgccactt cctccgcacc aagaaacacg tccgtgtcaa
    36361 cggtgagctg ataaactggc agagcccgat tgccgcaggt gacctactgg aattgacctt
    36421 tgaccaagaa gattatcctg aaaaaagcat tcctctggga caggcggact tggtgaagga
    36481 gctctatcaa gatgagcact tgattatcgt caacaagcct gagggcatga aaacccacgg
    36541 caatgaaccg acggaaattg ccctgctcaa ccatgtatcc gcctatgtcg gtcagacctg
    36601 ctatgtggtc cacagacttg atatggaaac cagcggagct attctctttg ctaaaaatcc
    36661 ctttatccta cccattctca atcggctttt ggaggacaaa gtcatctatc gtgactatct
    36721 agctctctgc caaggccagc taaaaaagac agattggatc atcaccgata aaatcggacg
    36781 ggaccggcac gaccgtagaa agcgggtggt cgataatcgc aagggacagg tggcactgac
    36841 ccaggtccgc ctcttgaaga cccttggtaa aaatagtttg gtctcttgtc gcctccagac
    36901 aggaaggacc caccagatcc gagttcatct agcccaccac ggtcacgctc taatcggcga
    36961 ccctctttac agtcgagtcg tagcccctcg cctcatgctc cacgcccaaa aactcagctt
    37021 aacgcacccg ctgacactcg aagaaatcag tgtagaagca cggtcggaga gttttgagaa
    37081 agtcttgaaa aacatgaaat aaatagctgc accctagagt tctatatccc tatttcactg
    37141 gactaatcca gtgatttttt tatacttcca ctaaccaaaa aatccagaca aggtgatctt
    37201 gtctgggttt acaagttaat agcttaaaca caaaaaaata cgtaacctgg gatttgggaa
    37261 tccattgctt agccataaac caaaagtaaa ttaagacgat ctaaacaaaa cctacttccc
    37321 caaactttcc ttatatcgct tggacttttt accataccag tcttcaatgc tatatcctga
    37381 gagaatacga taatcttcca tatatttatt aatataaaat ccttgaatac aactaaacac
    37441 tattgctacg ataaagtaga aaccaaaaac aggcagaacc accgcaaata ccatcactaa
    37501 atttctaagc aagtcattct gataaatacc ttccccttga ttgggtaaaa agagacgaaa
    37561 cagaacgaag ggaaagacga ttaagccacc atatttcctc cctaagacaa caaacttctc
    37621 catcacatca tttaagggat tggaaaccga ttggtttcca tataaaccat tcaaaacttc
    37681 tttcttaaac cataggtatc tttctgcgat tacaaaaatt atgatagaca gattgagaat
    37741 gactgcaatt agcgaaccaa aaaacatggc cgaaccaatc gcacatagaa taaatacttg
    37801 ataattaagt aaactcacca tcaagaacat attccaattg aaatagtaat acgacaaaat
    37861 tcgattgtgg cgtatctttc taacgtccat taggtaatga acgattacta ataagccaag
    37921 ccatacgggg attgaaaata ggattttcgc ctccacaaat aatatatttc caacttcttt
    37981 atccgaatac ggtccgataa atgatattag aaagataaaa aattcaactg tcaaaaatcc
    38041 caagattttc tttccaaaac catttttctc tatgtcctcc attgaagtct gaatgtactg
    38101 atccgttacc acccccgtgc tctcttctaa agaggcattc catactgttt ttttcatgtt
    38161 tactcatcct tatcagatta tcatactttc ctattataca ataaataatc cccagcaaac
    38221 aatttactga ggatccaaat tactaattat atgatagaac ttttcctttt tcataaccag
    38281 attctgaaat caatgtatca tactgacctg aaaaagacta ctcatcaatg ttgacataac
    38341 cacgaaatac tacagctaca atgttttctt gattgaaaaa gtaagtttcc tctggagtaa
    38401 ccaatccctg tgggattcga actgcccata atcaaaataa acttcttttc catcctgaag
    38461 aacactagaa cccctattga taatcattaa gtctacattt tcacttctat ttagccttac
    38521 tacactaccc atccgataat atatcgctat tctttacaaa atactcttca aatttataaa
    38581 cactgtctgc aatagcggca gatacctcaa cccgacgatt tatttcttct ctactcatcc
    38641 tctatatcct ccattacgaa tttgaaaaca cgaataattt caatatcagc ttcgtcatat
    38701 aaggaatacg ttagtatata ggaaaatgtt ttttcatcat gccttgtttt gcttacttcg
    38761 attttagcaa ctgttggatc agttaatcca taagtttcta ttagtttctt tgtgtagtcc
    38821 gaaggagtct tctcttggta actcatatcc ttcatataag tattgggatg gtccagtacc
    38881 ttcactagct ctagattatt aaaatagtct tctgaaaaat ggaattcttc aaacatcagt
    38941 tttctattta ctaacacttc actagtcgta tttattttca attctccatc tatataagtc
    39001 gttggataac cttccgtttc agaaacagac aaatcataac tcattccttc aaactgtcca
    39061 tctgagttga tagtcaaatc agtctgaaat cccttggcac tctccatacc atatatcctc
    39121 aaactgtctt caatcgaaag aatatcaaaa ttctctatcg attgctggtc cagcacctca
    39181 tacatcggtg ccaactctgt tctaatctct gcttctttat tacaacctgt caaacccatt
    39241 atcataacac ctcctaaaat gcacatcatt agttttttta ttcgattcat tactccgcca
    39301 cctgcttact aatttttact ttttgatagt cttggtcatg atatagatac acttcatcta
    39361 ctttcaaagt ctcctcacga cttgtcattt tatgttgtac aatactttga tcatatagtc
    39421 tttgagcaac gattgccgtc accagattct ctttaatata cttaatagat aaatctgtct
    39481 tgagtaacga tgatttttgt gcaccaatta tcagttggac ccctactttg agtgattctt
    39541 ggtagagttt tataaagtct gtataactca tcttataaag gttcctttat gataagcatt
    39601 cggattttct acatacggaa tggcacgctg actataggta tatggaccat cactagggat
    39661 gtccgagaag ttccctcctc ccatatgtcc aaaacgatcc cattgatctg gcagacccga
    39721 atcccttgta attgactgaa ccgttccttc ttgatagccc aagttctctg gccaatcata
    39781 ctcaacccaa ccgtcgcgta ccgccactac atattgagga tccgatggaa cgttaatatc
    39841 tgtcttatcc gaaagatctg aataaaactc ttgaagtctt ataacttttt cctcaagtgg
    39901 tagatctatc ttcgaaagtt ctgtagtata acgtcctact tggatatagt taggagtgct
    39961 atctattgaa aaattccttg tcttctgaga aataatatca atccgtgtgc ccttaggtat
    40021 ctcaacaccg ccgacaaagt cgcccttgcc tgctccgaca atggtgccgc cgtacttgga
    40081 caggtcttcc aagaggttct gacggctgat tttcaaacca ttctgggcag ttgtgtattc
    40141 ctgaatgcgg atgttacccg cctcatcaaa gccaatcgca tcaactcgta tcttctgctc
    40201 aacgccatca accgtcttat tctcgacctt gctggcgatt ttaccaaact caaccgtttg
    40261 taagtccaca aagtcctgac cctgacgagc gttgagctga atttggcttg ggcttgaaac
    40321 ttcaatgtga gaaagttggc tttggagtcc cttaacagag ccctctacaa tgccttcaaa
    40381 tgctttacct cctatgtaat tcaaggtcgc attcgtaccg tctccactaa ggataccaga
    40441 tgccaattgt ccaagttcca caccctcatc cgcatagcca gccaatttac caatagtctg
    40501 aacggtcgtc agaatttgtt tacctgctcg caaggcacct tgaccggctg caaagctacc
    40561 aagagtagcc aatgtcacaa cagcctcagc accagcccag atacgctctt ccgtgctcaa
    40621 ctgagtacca gtaatcaagg tgttgcctgt aatcgcagag tgggcaccat ccgcaaagag
    40681 gtacgcacca cctgcaagtg caagcggaag ggcagcacct ccagtcataa ccgttcctgc
    40741 tgctagggca atgcccgcca aaattttgag accagtatca accaagccta aagcttcctt
    40801 gttctcctcc tgccaagtgc tatttttgat ttgactatag tctgactcca gagtcggata
    40861 gaactcctga accaactccg catcactctt ggaccccaac tctttgattt gtttatccgt
    40921 tagttggtcg gtctgcgggg tggttaatag cagagctact cactttgttc aaagagaaat
    40981 acgacatagt gacccgtctt ttattccttt ttctagcttc gctttaaacc aagcctagcc
    41041 tagcttctta tgtatcaagg aagaatattg cctttccatt ataccaaaaa tccagacaag
    41101 ttgaccctgt ctggaattaa aactctactc tggcacaaca accttcaaac gaatatctgt
    41161 cggctgtaat actttttgaa cttgcaccaa aaaggcaaga ccgttatccg atggggcata
    41221 ctgaaaagtc agattgataa ctttttctgt aaagtcatcc ccatagctgt ccacatactg
    41281 cttgctttcg ataaagtgaa tgtagttgtt taacttttct tggagtttga gaaggtggtc
    41341 ttgttcggta tcaggaagcc attcgttccc atctgccaat aataattcca gatggccgtc
    41401 cacaacgccg atagagtcga ttgttgttgt atccaaaatt ggcgaatcct ttctaagtct
    41461 aaatgtaatc tgtgcatcca tcccacgagg gtcaacctca gccataatct gaattttttc
    41521 aaaattataa atcactcccc actgcttctc ttcagttggt ttcccaaaat tagcgtgaag
    41581 ccatcgttta tcctcttcat gcacttcata aaaattagga tttcctagtc taccatctaa
    41641 agtaacactt gctaatatac cttcaacaaa ctt
//
LOCUS       DBNFCX010000006        40015 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.006, whole genome shotgun sequence.
ACCESSION   DBNFCX010000006 DBNFCX010000000
VERSION     DBNFCX010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 40015)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40015)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40015
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.006"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..1460
                     /locus_tag="AC1PJC_000219"
     CDS             <1..1460
                     /locus_tag="AC1PJC_000219"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619267.1"
                     /translation="PQHSPELGGSNRTPLPGLEGDNHTGDSGLSGRNHTPLPDLEGEG
                     HVTLEKLPDISKEGLHIPELPQYSPELGGSNRTPLPGLEGEGHVTLEKLPDISKEGLH
                     IPELPQHSPELGGSNRTPLPGLEGDNHTGDSNLSGRNRTPLPGLEGDDRTGDSGLSGR
                     NRTPLPSLEGDNRGPKLSDSSSEEGWKTGYEIGYLDGYRGFGKAPLPDPDYERGYFDG
                     QLARKRSNLEGRNHSPLPGESGETHLPNLSGNNGGHRLPGESGESQVPNLSGNNGHRP
                     LPGESGESQVPNLSGNNGGDQLPGESGEHHLPNLSGNNGARQLPGESGESHLPNLSGN
                     NGCHQLPGESGETHLPNLSGNNGGHRLPGESGETHLPNLSGNNGGLPLPGESGENHVP
                     NLSGNNGDHQLPGESGESHAPNLSGNNSGDQLPSESGESQVPNLSGNNGDHQLPGESG
                     NDDWSSFVELGYEHGRVDYNNGSFIEWEIGWRIEL"
     gene            complement(1725..2432)
                     /locus_tag="AC1PJC_000220"
     CDS             complement(1725..2432)
                     /locus_tag="AC1PJC_000220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619268.1"
                     /translation="MKNQLKSKAVAILHAQAIPALALITMIGMAGTTATIHADTQAAN
                     MPVESAQFNGYYDFLFPQTTETLTLAQELRADLEGRISEVEKRAPYSPEVTSQADELR
                     VKIQQLDFVWGSKDDLIQIYEMILQDIAIWKAQVKDYGLNPIDDYPSLDGDIIPLRRT
                     PEFYELRDELKADLESRITEIENLESRRGYWTPKANDFRNQVMQLDYHHIEKPLIREY
                     ERILRNLANWRTQVNES"
     gene            4042..6021
                     /locus_tag="AC1PJC_000221"
     CDS             4042..6021
                     /locus_tag="AC1PJC_000221"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase"
                     /protein_id="HIP6619269.1"
                     /translation="MNKTLKLTAVSMFSVVFLVACGVGKSTPQATPQTDFHSYINAEW
                     LKETKLGEGQAQIDNFAQMTDRTQEKIREMIDQLDENYQQLKIGSEERKLIDFYRLAA
                     DFETRNKLGIEPLKPFLDEIQKASTMDEVSKIFVSMYGKNIRTLINFSVTQDIKDSNK
                     NSLYIDPHKLSFAKENYEGTDDFSKKSQKAFKEYLQKIFYLIGDDSKEAAAKAELVFN
                     LEKEMALVQRPKKEADNFDARYNQKTWDEVKALAPNLPISALASELELEHAATMVVSE
                     PDALKKLNELYQKKNLAALKALLQYRLIAHYSNYLSEDIIEAKATYEGAMEGAVNIPS
                     HDEVVESAVDENFADLIGKLYVKNHFSEESKADVLKMVEEIKSTYRERIQAVQWMSEE
                     TKAHALKKLDSMGVKIGYPDQWKDYTNFSIQAKEDGGSLLSNIDTIRMSKLKEEFAEL
                     NKPFDKTHFGMPAHAVNAFYSPSNNEIVFPAGILQAPFYDPSASPEENLGGIGAVIGH
                     EISHAFDRAGSQFDEKGNLVNWWQPEDLEKFKAKVQQAADIYSKLEVAPGYYVNGEIS
                     TGEIIADLGGMTVAIDIAKKKGYDTKKVFEAYGKVWREVTTKEFAIANITDEHPPAKY
                     RVNNIVNQLEQFYTDFNVKEGDPMYVKPEERLKVW"
     gene            6156..7565
                     /locus_tag="AC1PJC_000222"
     CDS             6156..7565
                     /locus_tag="AC1PJC_000222"
                     /inference="COORDINATES: protein motif:HMM:TIGR01167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MSCRAMM family protein"
                     /protein_id="HIP6619270.1"
                     /translation="MLFSKHHTIRFVSVVALLTAGLGSMPTILAEETDVATNKTELDF
                     RANTVDGNNTASGEGNMPDLANKPESETNVATNKEQLTGKAIEITVQDEDATPLSSQL
                     VELKTSSNESLGSRLSDQNGKVSFTDKIVEGTFYEYYVNGEKIGEVFAGQSRFAYLSS
                     DKIVKEEASSFSSKKEETEEKGFTFTATIVNKNGKVLADKEVQIVDTSTREHKVVATN
                     RTNAKGQAIFNHLPLNINLSVVVDGVAQGYTLRANGSESQLGSSFIAEGEGTVDPEFS
                     MTPLTVVIRNAGANPVSGQEVTLVDKIGRSIGTQRTNADGKAIFKEGLLDGTFYTVLV
                     NGKVMSEVMTGMERSIYLSNKEIIKPSPAEKPQIKTEALIKEKFLSDRGKTQPNSGSK
                     KENMSEKMDSNKGKETSSNKMDTKKSSATIEKTEKKENRDHRKMLPNTGEKNGIATLL
                     GFLLLLVFPFLRKKSRKNA"
     gene            complement(8344..9051)
                     /locus_tag="AC1PJC_000223"
     CDS             complement(8344..9051)
                     /locus_tag="AC1PJC_000223"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018167686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HIP6619271.1"
                     /translation="MFNLNSEKLTVLKWFDIVILSLILFGEGIFNSTLQYLALQDQTR
                     TLQENLTFSALDNCKAVAIQIVWLALALFYLLLRNFDFSQWKKRILFTPWVPLQTIVI
                     FIVAALCMDVFQLVSHQVIAPATPSMFHLVDKASYSLIFYALLNGFYEEIFFLGICLM
                     GNPKHAKWAFLYSLIIRCSFHTYQGLVSGIGLGLIVGIIFHLLYQKIKPQNMLPFFLA
                     HAIADIIGLTVLGHIYI"
     gene            9215..9859
                     /locus_tag="AC1PJC_000224"
     CDS             9215..9859
                     /locus_tag="AC1PJC_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018030666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HIP6619272.1"
                     /translation="MAKIMVVEDDIVISQVVCEFLKDHGYEVTHISDGKIALETFREE
                     SFDLIVLDIMIPSMTGLEVLQEIRKTSKIPILMLTAMDDEYTQLVSFNQLISDYVVKP
                     FSPIILVKRIENILRGEGDIIEAADIQIHPSSGAVYMAEEEVQLTKKEYEILLYLAKR
                     RGKIVNRDHLMLGIWGYTELDSRVLDNHIKNLRKKLPSLPLRTVIGRGYQVEEF"
     gene            9862..11220
                     /locus_tag="AC1PJC_000225"
     CDS             9862..11220
                     /locus_tag="AC1PJC_000225"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HIP6619273.1"
                     /translation="MGIARKNFIVVTVMITFISLTLLGLLYYAMPIYYNQVRKQELKD
                     DYMRVAMQLDGKPEVEILEKIDDYDQKTPNIIITLFSESNKIIYPDPNDQEAKKNEEE
                     YLKKGNFDEFGSWSVAIESAEGTTYYLLFNYGFHSLSDVSQTLVTFYPFILVLIILLA
                     VSSAFVYSRLATRRIAAISATTRKMQSLEPGINCSVSGVDEVATLAQDVNSLYSKLLT
                     SIKELKTENERTLAREKEKSDFLRITSHELKTPIASALGLIEGMIHNVGPFQDHDTYL
                     KKCRELLKEQSNLVYSILEATNLEMALKDSKGSIQLDELIKDSLASYFSLAEVRPYQF
                     TVDLAPVIIEGNSVYLLKAIKNVLDNAFRYTKIGGAIHLQLTEHQLIIENEVETVLDE
                     EELSQIFKPFYRPDFSRQRKDGGTGIGLFIVQQILEKHQFGYTFYAADEKTMRFVIQF
                     DS"
     gene            11503..12048
                     /locus_tag="AC1PJC_000226"
     CDS             11503..12048
                     /locus_tag="AC1PJC_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxyl methyltransferase
                     family protein"
                     /protein_id="HIP6619274.1"
                     /translation="MIVFWVISVFVLRLYFLKISLRNEQRILANGGSEYGVQNTKLLT
                     VVHIVFYLSCLSEAVLKQASFDGLSVLGLAVLFFSMMMLCWVTRILGDIWTVKLMLVK
                     NHRFIDHWLFRTVKHPNYFLNIIPELIGLSLLCHAKYSFIILFPIYMVVLCRRIHEEN
                     ILLKEVIIPNGKVESAGEMLE"
     gene            12255..15191
                     /locus_tag="AC1PJC_000227"
     CDS             12255..15191
                     /locus_tag="AC1PJC_000227"
                     /inference="COORDINATES: protein motif:HMM:NF012948.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009986 - cell surface [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HIP6619275.1"
                     /translation="MSKQKVISGLLLSTTVLGGLLLYPTSLAKAEGTELTEVAVTEAP
                     KSNGEEIPVTSENSPSPVLEEAVMVTDSNPSTNAESSLKEEEDKKENVDLELVSNEEL
                     VSLSESKNVVEGEEKEDSTLKVEDGPLLQATNRSSFFGDQEYFKKSVSINQVSEGINN
                     TEITWKVEFDTEKWSFDHHSGGVYFIIPQGLKLTRIVEETKSSENLLEQFPKKVNYPE
                     NGEGNPFRIFSKKEEPLNLERSFNSQWGWSAGKVGSTEMEKWKENFSDIYFIDSIKGT
                     GKINYQLTAKVNVDLQSTFPFIAVMKSFRYDTVTAAGRIFNVKGTGKTSESNTIAKPA
                     LPRVEFIFQEGGNGALDIGATHRIDKGGFSEEGITGETFGEFFKRVGANERVVPAPGY
                     TFVGWAFARNPDEVIDLELKISNDLPLLLVPVMTKQPQPETPKAPSIPEKPMVDPKVS
                     ETEKPGTPEQPEVPAPSPSPESPKKEDMAPNKTKDEVYEPIVQTDKWVVYPVGTSKEE
                     AEKKILDAVTVPKEAGETKKEIVGDVPLAAGQYGVNVKVIYDDKSYDVTLVDVHVTSN
                     QTDKQNEDMPQSPEQPPMSEMPKVEPKVEEMKPEVMPEIPEQPREPKGPEMPSPAPEQ
                     PKTPEVPDMSQPEVPKSETPKMEQPEVVPPTPESEKPHAPMKPETSSPEGPEKPRVPE
                     TPEVVPPTPAPEQPRVPEMSETPAPSPAPESPKKEEMVPNKTKDELYEPIVSMVDWVA
                     YPVGTSKEVAEKKILDAITVPQEAGPVTKEVVGEVPLVEGQYGVNVKVIYDDHSYDVV
                     LVDVRVTKEKSHMDMPQPEAPKKETPKQEQPEMVIPEEKMPKVDNPKQDTPKLEQPKV
                     ETPKEEIPQTETPKIEVPKESEKEKSDIQKMAKPKQEDQMAKESQKMDNPSEKMKPKS
                     QGAKTTAPAVKQPMAEMSDGKKPQKSKETLPNTGEAGGSLTWLGAALATLSTFVYVFK
                     NKKKEE"
     gene            15409..15915
                     /locus_tag="AC1PJC_000228"
     CDS             15409..15915
                     /locus_tag="AC1PJC_000228"
                     /inference="COORDINATES: protein motif:HMM:NF016062.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004671 - protein C-terminal
                     S-isoprenylcysteine carboxyl O-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006481 - C-terminal protein methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HIP6619276.1"
                     /translation="MIIFSVGLVVLLRLYCLRIALENEEKTVFTGGIEDSIHNVRWLL
                     VAHMVFYFSCLCETLIKQPLFDWFSGLGFVMLFSAMATLYYLRRLLGDKWTVGQLFGE
                     TYYPIHHWLFQTVRHPNIFLIIIPELVGLALLCHAKYSLIFLFPIYMRILHGRIREEN
                     LLVKETVA"
     gene            15983..17089
                     /locus_tag="AC1PJC_000229"
     CDS             15983..17089
                     /locus_tag="AC1PJC_000229"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619277.1"
                     /translation="MKKTKMIAGLLVSSALLGATMTTNVSNIKADTEASTDASLVTIE
                     SNQTLEEQPLTVEEQATKGAENGENQDDEDPNQSANLEEIENVISEPKAEATPETKVE
                     DSTLSEFTPRAVRSAENNLDMESLPVTPELPNEKQPAYIQDTNYPGKPFQVQQSVLIE
                     ATSVTDKKIEWKVTFKSRDWAFYESIGGYYFIIPDGLKLTKLVDQSNTDILNHYKSEG
                     AGGDEYRAFENGKGEFDAQWGWSAGLMDNAIFNKWKEENRFSKILFRDYRRDVQTVTY
                     KLETEIEKQSEKPFSLIAVIKNFNKYTHYIYGNQIASAAGLEVVAPRTEKVPKEKKKN
                     EGKERKKDRSKKNRHSHKEHKKQHRTKELTGRKK"
     gene            complement(17176..18084)
                     /gene="ypfJ"
                     /locus_tag="AC1PJC_000230"
     CDS             complement(17176..18084)
                     /gene="ypfJ"
                     /locus_tag="AC1PJC_000230"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KPN_02809 family neutral zinc metallopeptidase"
                     /protein_id="HIP6619278.1"
                     /translation="MKIDDLRKSSNIEDRRGQSSSNSSFSSGSSGGNVLLGLLFSRLG
                     WKGKLLVLVLLVAFGGMSNLGGLLSPSTGTNPYQSSQVTTTGTDVSDADAEFMSKVLG
                     STEDFWVQEFKANGLTYNAPTMVFYTNQTQTGCGVGSAQAGPFYCSADRKIYIDTSFY
                     QELSSKYKAAGDFAMAYVIAHEVGHHVQNELEVLGAYHQKRAQLSDKEGNALNVRLEL
                     QADYYAGAWAKYVDGQGILDAGDIDEAMNAAHAVGDDTLQQEAYGRTVPDSFTHGTSE
                     QRKKWFNLGYTYGDLAHADTFSVENP"
     gene            18251..19594
                     /gene="xseA"
                     /locus_tag="AC1PJC_000231"
     CDS             18251..19594
                     /gene="xseA"
                     /locus_tag="AC1PJC_000231"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HIP6619279.1"
                     /translation="MVEYLSVSHLTKYLKLKFDRDPYLEKVYLTGQVSNFRKRPSHQY
                     FSLKDDKAVIQATMWAGVYKNLGFELEEGMKINVIGRIQLYEPNGSYSIVIEKAEPDG
                     IGALAIKFEQLKQALTQEGLFKEEFKQALPRFTKKIGVITSPSGAVIQDIITTVSRRF
                     PGVEIVLYPTKVQGDGAAQEVVANIQRANERDDLDVLIVGRGGGSIEDLWAFNEEIVV
                     RAIFESRIPIISSVGHETDTTLADFVADKRAATPTAAAELATPVTKADLLGYLNQQEN
                     RAYQAMTNRLRFLRGQLEKISQSVMFRQPERLYDGYLQKLDRLTNQLQTRMKELYSQQ
                     KQASLLLQQRLQGVHPGRKVESFQERIIQQERLLKSNMANIYDNKMAKADKLIEALTM
                     LDTSRIVARGYAMIRQDGRVIDSVENVQMGENLTIQMKDGQLDVEVKHVQTDENI"
     gene            19569..19784
                     /locus_tag="AC1PJC_000232"
     CDS             19569..19784
                     /locus_tag="AC1PJC_000232"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HIP6619280.1"
                     /translation="MSKQTKTFEENLAELEGIVTKLERGDVALEEALAEFQKGMVLSK
                     DLQKTLAEAEKTLVKVMQADGSEAEMD"
     gene            19784..20653
                     /locus_tag="AC1PJC_000233"
     CDS             19784..20653
                     /locus_tag="AC1PJC_000233"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004659 - prenyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HIP6619281.1"
                     /translation="MVASKLQRLEEAMADFYQPQVAERLNQSVLYSLQAGGKRIRPLL
                     LLTILESFGMELKQAHYQVAACVELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEA
                     TAILAGDSLFLDPFGFLAQVDLPAETILALVRELSQASGTFGMVAGQVLDMAGEGQNL
                     TLEQLQAIHANKTGKLLTFPFVAAGLIAGQSDVVINHLRQAGQLIGLAFQVRDDILDV
                     TATFEEIGKTPQKDVLAEKSTYPALMGLEASKVFLEDSLNQAINELDQVAKQVPFSTE
                     KIKEIIESLRING"
     gene            20646..21467
                     /locus_tag="AC1PJC_000234"
     CDS             20646..21467
                     /locus_tag="AC1PJC_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HIP6619282.1"
                     /translation="MAKERVDVLAFKQGLFETREQAKRGVMAGLVISVINGERYDKPG
                     EKIDEGIELKLKGEKLKYVSRGGLKLEKALQVFQLSVEGQTTIDIGASTGGFTDVMLQ
                     AGAKQVYAVDVGTNQLAWKLRQDERVISMEQYNFRYAELGDFELGQPSFASIDVSFIS
                     LSLILPALHRILAEGGQVVALVKPQFEAGREQIGKNGIVKDKSVHLKVLEDVTKMAVE
                     TGFSVKALSFSPVQGGHGNIEFLAHLEKSTQPNQIDKEVITTTVYQAHEEFKKDE"
     gene            21460..21885
                     /locus_tag="AC1PJC_000235"
     CDS             21460..21885
                     /locus_tag="AC1PJC_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine repressor"
                     /protein_id="HIP6619283.1"
                     /translation="MNKRERLEVIKDLVVRFPIDTQEEIVERLEAMGVNATQATVSRD
                     IKELGIIKVPSADKGYIYGLPKAGLVKVKSQNVFEVSVMDKMINLRLVPGSSAVVKRQ
                     ILEQFQEHVFSVIADDDSILLIVTNEGIISQIEQTVRGW"
     gene            21888..23549
                     /gene="recN"
                     /locus_tag="AC1PJC_000236"
     CDS             21888..23549
                     /gene="recN"
                     /locus_tag="AC1PJC_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HIP6619284.1"
                     /translation="MLLEVSIKNFAIIEQVSLNFENGMTILSGETGAGKSIIIDAMNL
                     MLGARATTDVIRHGAAKAEIEGLFSFENSRALEQILLEQGIEVADELIIRREILQNGR
                     SVSRVNGQMVNLSVLKQIGQYLVDIHGQHDQEELMKSQHHIRLLDSFGEDEFWSLKDR
                     YQTTFDAYRSLRKRVLEKQKNEQEHKARIEMLEYQIAEIEAADLKSGEDIQLNQERDK
                     LLNHKQIADTLTNAYALLDNEDFSSLNNLRSAMSDLQSLEEFDPDYKQLSSSLTEAYY
                     VVEDVTKRLSDVVDNLDFDGNRLLQLESRLDLLNTITKKYGGTVDDVLDYFSKISEEY
                     NLLTGNDLSGDDLEVQLKNLEKELVERAGQLSQSRHELAVVLEDIIRQELQDLYMEKA
                     RFQVRFTKGKFNREGNETVEFYISTNPGEDFKPLVKVASGGELSRLMLAIKSAFARKE
                     GKTSIVFDEVDTGVSGRVAQAIAQKIYKIGQYGQVLAISHLPQVIAIADYQFFIEKIS
                     DEHSTVSRVRLLTKEERIEEIAKMLAGDKITDAARNQAKELVEKG"
     gene            23643..24476
                     /locus_tag="AC1PJC_000237"
     CDS             23643..24476
                     /locus_tag="AC1PJC_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005504 - fatty acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HIP6619285.1"
                     /translation="MSKIKIVTDSSTTIEPSLVEELNITVVPLSVMVDGVVYSDNDLK
                     EGEFLELMRGSKNLPKTSQPPVGLFAETFADLAKDGSQIIAILLSHALSGTVEAARQG
                     ATLSGADVTILDSSFTDQAEKFQVVEAARMAQAGASKEEILAAIETVKEKTELYIGVS
                     TLENLVKGGRIGRVQGMLSSLLNIRVIMEMKDHQLTPIVKGRGNKTFKKWLEEFTATL
                     ADKKVAEIGISYSGTADFANEMKSQLQEYVSKEISVLETGSIIQTHTGEDAWAILIRY
                     E"
     gene            24469..25302
                     /locus_tag="AC1PJC_000238"
     CDS             24469..25302
                     /locus_tag="AC1PJC_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HIP6619286.1"
                     /translation="MNNRKLIQGFVFFFLVILGSIFLFHQLIPVASSRISRQELTVSE
                     KISFRYVALGDSLTEGVGDTTGQGGFVPLLAQSLTNDYGYEVDYKNFGVSGNTSNQIL
                     KRMKEDGELISYLKTADLLTLTVGGNDLRKAIIKNIANLKVSTFDKPAKDYGKRLDTI
                     IKTARKNNPNLPIYVVGIYNPLYLNFPELTEMQTIVDNWNTMTEQITEKYQHVYFVPI
                     NDLLYKGLEGEAGISQNGSQVTNNLLYEEDSFHPNNTGYEIMKKAILERMNETTESWE
                     P"
     gene            25274..25870
                     /locus_tag="AC1PJC_000239"
     CDS             25274..25870
                     /locus_tag="AC1PJC_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YpmS family protein"
                     /protein_id="HIP6619287.1"
                     /translation="MRPRKAGNLNIWKWLFLAQLALLIGCGIVLYTRIQTDREDLTKL
                     VQTSTEDTKVGTFSTNREQLNQTLTNYLKEYQTEEFSYQLFVTSQQVVFEGSYQIFGV
                     TIPLYIYFQPSKTEDGSILLRITEISVGSLSLPKAEVLAYLQKNYKLPAFVKIDSEQA
                     QVQVQLTELKNKFGLYGKANTIDLYNDQFIVDIYRKRQ"
     gene            25960..26235
                     /locus_tag="AC1PJC_000240"
     CDS             25960..26235
                     /locus_tag="AC1PJC_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002950996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0030527 - structural constituent of
                     chromatin [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HIP6619288.1"
                     /translation="MANKQDLIAKVAEATSLTKKDSAAAVDAVFGAVADYLAAGEKVQ
                     LIGFGNFEVRERSARTGRNPQTGAEIKIAASKVPAFKAGKALKDAVK"
     gene            26584..27051
                     /locus_tag="AC1PJC_000241"
     CDS             26584..27051
                     /locus_tag="AC1PJC_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase family protein"
                     /protein_id="HIP6619289.1"
                     /translation="MTIRKARQSDIPILNELLQDILQVHHQARPDIFKSAGQKFSEAE
                     LVALLENPDKPIFVFELDGQVVGHLFCELSTATGDVLEPVKTLFIDDLCVANSARGQK
                     IGEQLYEFALSYAKEQGCHNLTLDVWADNAGAVRFYERQGMKPQKFRMEQIIN"
     gene            complement(27073..28332)
                     /locus_tag="AC1PJC_000242"
     CDS             complement(27073..28332)
                     /locus_tag="AC1PJC_000242"
                     /EC_number="1.1.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004420 - hydroxymethylglutaryl-CoA
                     reductase (NADPH) activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0015936 - coenzyme A metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA reductase,
                     degradative"
                     /protein_id="HIP6619290.1"
                     /translation="MSTFSGFYKKSRQERIDILRQNRSLSEDSLDILYKDENLPEAIA
                     GKMAENHLGTFSLPFSVLPELLMDGQTYSVPMVTEEPSVVAAASFGAKIIAKSGGFTT
                     NIHNRIMIGQVALYDISDHSRATQAILDQKESILETANQAHPSIVKRGGGARELTVES
                     KDEFLIVYLQVDVQEAMGANILNNMLEAVKEDLKELSKGQALMGILSNYATESLVTAQ
                     CHIAISSLATSSAIAQETAQKIALASKLAQVDPYRAATHNKGIFNGIDAVVIATGNDW
                     RAVEAGSHAYASRDGQYKGLSTWSIDGEHLVGSITLPLPIASVGGSIGLNPKVAVAFD
                     LLQQPKARQLASIIASVGLCQNFAALRALVTSGIQAGHMKLHAKSLALLAGAEEHEVD
                     QLAQLLRKEKHSNLETAQKLLAKMREH"
     gene            complement(28394..29548)
                     /locus_tag="AC1PJC_000243"
     CDS             complement(28394..29548)
                     /locus_tag="AC1PJC_000243"
                     /EC_number="2.3.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004421 - hydroxymethylglutaryl-CoA
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA synthase"
                     /protein_id="HIP6619291.1"
                     /translation="MNIGIDKIGFAAPDYVLDLADLAQARNVDPNKFKIGLLQSEMAV
                     APVTQDIISLGAKAAEAILTEEDKQTIDMVIVGTESSVDQSKAAAVTIHGLLGIQPFA
                     RSIEMKEACYGATAGLSLAKSHIAQFPESKVLVIASDIAKYGVASGGEPTQGAGAVAM
                     LVTANPRILVLNNDNVCQTRDIYDFWRPNYDKYPRVDGKFSTEQYTDCLTTTFDYYQQ
                     KTGKTLNDFAAMCLHIPFSKQGLKGLQAIAQDEETLSRLTERFQEAIVYNKVVGNIYT
                     GSIFLSLLSLLENSRALETGDQILFYSYGSGAVCEIFSGQLVEGYRNHLQENRLEQLN
                     QRTKLSVKEYEQVFFEEITLDETGSSLDLPEDQSPFALIKVDNHKRIYRK"
     gene            complement(29577..30761)
                     /locus_tag="AC1PJC_000244"
     CDS             complement(29577..30761)
                     /locus_tag="AC1PJC_000244"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HIP6619292.1"
                     /translation="MKKVAIVSAYRSAIGSFGGSLKDIEIADLGAQVLETALANKNIP
                     ADSVDEVIFGNVLSAGQGQNIARQIAIRAGIPQTASAYAVNKVCGSGLKSVLLAAQSI
                     MLGDNDVVVAGGIEIMSQAPYLSKTSRFGSKFGHISLEDSMLTDGLTDAFNDYHMGIT
                     AENVAERYHVSRAEQDAFTYSSQEKAAKAIAEGRFVDEIVPIRLKNRKGETIFATDEY
                     PRLTPIEKLATLRPSFKKDGTVTAANASGINDGCAVLVLMSDEKASELNIQPLAYIEA
                     YATSGLDPALMGLGPITASQKALQKLNKTVEDIDLFELNEAFAAQSIPVVKQLGIDPA
                     KVNVNGGAIALGHPIGASGSRILVTLIHELIKQEKELGLCSLCIGGGQGISLIVSNAQ
                     TS"
     gene            30987..31679
                     /locus_tag="AC1PJC_000245"
     CDS             30987..31679
                     /locus_tag="AC1PJC_000245"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate mutase"
                     /protein_id="HIP6619293.1"
                     /translation="MVKLVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIK
                     EAGIEFDLAFTSVLKRAIKTTNLALEAADQLWVPVEKSWRLNERHYGGLTGLNKAEAA
                     AEFGDEQVHIWRRSYDTLPPEMAKDHEHSAHTDRRYAHLDDSVIPDAENLKVTLERAL
                     PFWEDKIAPALKDGKNVFVGAHGNSIRALVKHIKQLSDDEIMDVEIPNFPPLVFELDE
                     NLNIVKEYYLEA"
     gene            31785..32168
                     /gene="gloA"
                     /locus_tag="AC1PJC_000246"
                     /gene_synonym="lguL"
     CDS             31785..32168
                     /gene="gloA"
                     /locus_tag="AC1PJC_000246"
                     /gene_synonym="lguL"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HIP6619294.1"
                     /translation="MVSKKMLHACLRVENLEASQKFYEEAFGFKETRRKDYPEHKFTL
                     VYLALEGDDFEIELTYNYDHGPYIVGDGFSHLALSSDDLEGDNAKHKELGYPTTDIKG
                     LPGSPGRYYFVTDPDGYRVEVIRAD"
     gene            32459..33856
                     /locus_tag="AC1PJC_000247"
     CDS             32459..33856
                     /locus_tag="AC1PJC_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HIP6619295.1"
                     /translation="MKKVSFWLGINIALLGIMVSLAVWLFAGLQERQVSQFIEEKQQT
                     ILAKGKGKIQEGNIDTTHVVAALPTDDAGHVLGPVESRMISYVQRRFGHKKPAGKIQK
                     LVFISSIEGKTNFKNVTAREIQAEHYKVDNLQIKKQDKLPSERVLLTQDNELFTLEDL
                     LPNLSSAASIIVGHLREALLAQGMKETDVEAIVKKFETLDLNAISFSYGDSQLTLQLP
                     DGYGINQLVLPISDLYPVVKSDYLVDADKVGYDEYMAAQVVDKKHLRQVALTFDDGPN
                     PNTTPVVLDLLKKYNAKATFFVVGKAVAGNEAILRRMVADGHVIANHTWNHPNLVTIS
                     GEQVQREIQDTQAAITEATGIVPTMVRPPYGSVNQAVVNQMGLPSIYWSVDSKDWKSR
                     NPQAILKEIKEQTCPGSIILMHDIHQSTVDSLESVLQYLTGEGYNMVTVTDLLASPLN
                     PQLIYYSQELSGPAQ"
     gene            complement(33923..35005)
                     /locus_tag="AC1PJC_000248"
     CDS             complement(33923..35005)
                     /locus_tag="AC1PJC_000248"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HIP6619296.1"
                     /translation="MKSKFPFSWTDQLTLLGFEDFTPIQVQAFEPIANGKSLLAISPT
                     GTGKTLAYLWPSLLALTPKKAQQLLILAPNTELAGQIFDVCKAWSETIGLTAQLFLSG
                     SSQKRQIERLKKGPEILIGTPGRIFELIKLKKIKMMNINTIVLDEFDQLFSDSQYQFV
                     EKIINYVPRDHQLIYMSATAKFDRQKIAEDIESIDLSEQKLDNIQHCYMMVDKRDRLE
                     TLRKFANIPDFRALAFFNSLSDLGASEDKLLYNGVNAVSLASDVNVKFRKVIIERFKN
                     HELNLLLATDMVARGIDIDNLECVLNFEVPFDQEAYTHRSGRTGRMGKEGLVITLVSS
                     PSELKQLKKYASVQEVILKNQELYKI"
     gene            complement(34995..35981)
                     /locus_tag="AC1PJC_000249"
     CDS             complement(34995..35981)
                     /locus_tag="AC1PJC_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family protein"
                     /protein_id="HIP6619297.1"
                     /translation="MLNFGIVGTSDISHRFIEAAHLSGHYQLQAVFSRKQETAAAFSE
                     QYEGVDLYTEWVKFLSAPIDVVYIASPNALHFEQAKAVLAAGKHAIVEKPMVSTPQEL
                     EQLRRVAQENNVFLFEAARNYHEQAQAIIREFLTDKTILGGSFGYAKYSSKMPELLAG
                     QMPNIFSTDFSGGALMDLGVYTLYAAIGILGTPRTARYVAQQLPSSIDLNGSGQLIYD
                     NYIVHIQAGKNITTNLASEIYTNDGTLTLNACQYISSAIFTKHDGSQIVLPIQAAQHP
                     MLEEALEIAQAIKQQNRKLVDQWLTVAESVHQTLYTMRQDAGIIFKADNNEI"
     gene            36064..36693
                     /gene="udk"
                     /locus_tag="AC1PJC_000250"
     CDS             36064..36693
                     /gene="udk"
                     /locus_tag="AC1PJC_000250"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004849 - uridine kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HIP6619298.1"
                     /translation="MTQKPIIIGVTGGSGGGKTSVSRAILDNFPNARISMIEHDSYYK
                     NQSHLTFEERILTNYDHPLAFDTDLMIYHISELLAGRSVDIPIYDYTQHTRSEKTYRQ
                     EPQDVFIVEGILVLEDKRLRDLMDIKIFVDTDDDIRIIRRIKRDMEERGRSLDSIIEQ
                     YTSVVKPMYHQFIEPTKRYADIVIPEGVSNVVAIDLINTKVESILRERG"
     gene            36695..37234
                     /locus_tag="AC1PJC_000251"
     CDS             36695..37234
                     /locus_tag="AC1PJC_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HIP6619299.1"
                     /translation="MPKQRILPHIILGIMGASGQMVTGKQITDYVQRDLGEFWQVAHS
                     QVYPELKRMTKEELITCHAVPGNEKEKQYAMTATGRQILDEWLSIPNEETPQQRDLFS
                     IKMFFIREKDDPRIPGLLQSQIELVTKHLKHLESRKVELFSTKESIQDNYGHYLILTR
                     AIERNRAQLKWLEDTLAEM"
     gene            37322..37591
                     /locus_tag="AC1PJC_000252"
     CDS             37322..37591
                     /locus_tag="AC1PJC_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HIP6619300.1"
                     /translation="MSIKQMVSMALVVWNLVVFITYGMDKGKARKNAYRISEKTLLLM
                     SYFGGGLGAWAGGTHFRHKTQKKYFQLAWAIGVLIDAVIMYWMWK"
     gene            37656..38153
                     /locus_tag="AC1PJC_000253"
     CDS             37656..38153
                     /locus_tag="AC1PJC_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HIP6619301.1"
                     /translation="MTKQEKISNYQLLLAQLEALLDGETNALANLSNASALLNQALPN
                     SVFTGFYLYDGSELILGPFQGGVSCVHIALGKGVCGEAAAKRQTILVDDVRLHDNYIS
                     CDATALSEIVVPMVKNDQLLGVLDLDSRLVADYDTIDQDYLEKFVALLVEKTDWNFAM
                     FGEKR"
     gene            38153..39820
                     /gene="dnaX"
                     /locus_tag="AC1PJC_000254"
     CDS             38153..39820
                     /gene="dnaX"
                     /locus_tag="AC1PJC_000254"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002895702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HIP6619302.1"
                     /translation="MYQALYRKYRSQTFGEMVGQEVVATTLKQAIEQGKISHAYLFSG
                     PRGTGKTSAAKIFAKAMNCPNQIGGEPCNDCYICQAITEGSLEDVIEIDAASNNGVDE
                     IRDIRDKSTYAPSLATYKVYIIDEVHMLSTGAFNALLKTLEEPTENVVFILATTELHK
                     IPATILSRVQRFEFKSIKVTDIQEHLAAILTKEGLIFDEQALTIIARRAEGGMRDALS
                     ILDQALSLSQDQQVTLEIAEEITGSISLRALDDYVASLRQGDSVTALQHLQTLFDQGK
                     SMSRFATDLLHYLRDVLIVQTGGEDTHLTTGFSENLALEQARIFTMIEMVTRGLADIK
                     SSPQPKIYAEMMTIRLAEDSSPSGAMAELPADLLGQLASLQQQVADLQKQLGQLSSQP
                     SAVKPVSRKPQAPKKYRLDTSKVHAILQEAMENPTLARENLTRLQNAWGEIIESLSGA
                     DRALLVGSQPVAANENHAILAFDSPLNAEQTMKRDNLNTMFGNILSKAAGFSPQILAI
                     AQEDWVSIRAEFSAKAKGQKTQEIEKEASPVPEEFGFLADTVEIRND"
BASE COUNT        12569 a         7189 c         8972 g        11285 t
ORIGIN      
        1 tgccacaaca ctcaccagaa ttaggcggta gcaatcgtac tccacttcca ggcttagaag
       61 gtgataacca cacaggtgat tcaggcctaa gcggtcgtaa tcacactccg cttccagatt
      121 tggaaggcga aggtcatgtc actcttgaaa aacttccaga tatttcaaaa gagggcctcc
      181 atattcctga attgccacaa tactcaccag aattgggtgg tagcaatcgt actccacttc
      241 caggtttgga aggcgaaggt catgtcactc ttgaaaaact tccggatatt tcaaaagagg
      301 gcctccatat tcctgaactg ccacaacatt caccagaatt gggtggtagc aatcgtaccc
      361 cacttccagg cttagaaggt gataaccaca caggtgattc aaacctaagc ggtcgtaatc
      421 gtactccact tccaggctta gaaggtgatg accgcacagg tgattcaggc ctaagcggtc
      481 gtaatcgtac tccacttcca agtttagagg gagacaatcg tgggccaaaa ttaagtgatt
      541 ctagttcaga agagggatgg aaaacaggct atgaaatagg ttatttagat ggttatagag
      601 ggtttggaaa agctcctctt ccagatccgg actatgagag aggttacttt gatgggcaac
      661 ttgcacgaaa acggtctaat ctggaaggtc gcaatcatag tccacttcca ggtgaaagtg
      721 gtgaaaccca cttgccgaat ttaagcggta ataatggcgg tcatcgactt ccaggtgaaa
      781 gtggtgaaag ccaagtgcct aacttaagtg gtaacaatgg tcatcgtcct cttccaggcg
      841 aaagtggcga aagccaagtg ccgaatttaa gcggtaataa tggcggcgat caacttccag
      901 gtgaaagtgg tgaacatcac ttgccaaatt taagcggtaa taatggcgcc cgtcaacttc
      961 caggcgaaag tggtgaaagt cacttgccaa atttaagcgg caataatggc tgtcatcaac
     1021 ttccaggtga aagtggtgaa acccacttgc cgaatttaag cggtaataat ggcggtcatc
     1081 gacttccagg cgaaagtggt gaaacccatt tgcctaactt aagtggcaat aatggcggcc
     1141 ttcctcttcc aggcgaaagt ggtgaaaacc atgtgccgaa tttaagtggt aataatggcg
     1201 accatcaact tccaggcgaa agtggtgaaa gccatgcgcc gaatttaagt ggtaataata
     1261 gcggcgatca acttccaagc gaaagtggcg aaagccaagt gccgaattta agcggtaata
     1321 atggtgacca tcaacttcca ggcgaaagtg gtaatgatga ttggtcatca tttgttgaac
     1381 ttggatatga gcacgggcgc gtagattata ataacggtag ttttatcgag tgggaaatag
     1441 gttggaggat tgaattgtaa tctacatccg aaatcccatc ttggtttgaa tacttcctaa
     1501 aatgaaatac agaaaaacac tcctgttgaa ttctagtata aaactagaca caggagtgtt
     1561 ttattgcgtg gagtatgaaa tgattggcat tactgtagac tggtttcaaa taaagaaata
     1621 aagagagagc aattgctctc tccctggttt atacattgtt tgatgataaa aggaatttat
     1681 acgtaatttt ataaactatg aaaagtgaaa tggtagtaaa aggattagga ttcgttcact
     1741 tgtgttcgcc aatttgcaag attgcgaagg attctctcgt attcgcgaat taatggcttt
     1801 tcaatatggt gataatcaag ttgcataact tggttgcgga aatcattagc ttttggagtc
     1861 caatagcctc ttcttgattc caagttttcg atttcggtga tacggctttc caagtctgct
     1921 tttaattcgt cacgcaattc ataaaactca ggagtgcgac gaagaggaat gatgtcacca
     1981 tctagagatg gatagtcatc aataggattt aagccgtagt cctttacttg tgccttccaa
     2041 atcgcgatat cttgaagaat catttcgtat atctgaatca aatcatcttt ggaaccccaa
     2101 acaaagtcaa gctgttggat ttttacgcgt aattcatcag cttggcttgt gacttcggga
     2161 gagtagggag ctcgtttttc cacctcgcta atacggcctt ctaaatcggc acgtaattcc
     2221 tgagccaatg ttagagtttc tgttgtttgt ggaaagagaa aatcgtaata tccattaaat
     2281 tgagccgatt caacaggcat gttagctgcc tgggtgtcgg cgtggatagt ggcagttgtc
     2341 ccagccattc caatcattgt gattagtgct agggcaggaa ttgcttgtgc atgtaaaata
     2401 gctactgctt tacttttaag ttgattcttc ataaagcacc tctttctaaa aaatatataa
     2461 aagaatggcc attcctctac acactcatct tatcataaac gagaaattcg taggtgggga
     2521 cagactatta tttgtatacg ctttatctgt aagatgattt attcgaaaaa ttcaatagtt
     2581 gtacgatgga gctggagaat gaaggtctac aaagtttaac gttaatggtt gttattagaa
     2641 tagtcacata atcatgcgaa aaaactggat agaatgataa gtgtaggcta gtatattgta
     2701 aaaatgtcaa gctggtaatg actttactat aaatactaaa tacagcgaga gtggcctata
     2761 tttcttaaga atagctaaaa gattttgtgt aaagtatgac ataactttcg tttttaggtt
     2821 atatacccct gccctagttt ttatgtaatg tttgtatatg ttttgttttt ttaacatttt
     2881 tttatgctat actaacttca cggtatcgat taagatagcg aatgatgaaa ttgaaaagga
     2941 gttatgatgg aataagtcat agcaaagcga aatgtaatct gaagtgatat tgcatatacg
     3001 ttatggttat ctataattgt cggaactaat ttaatatttc ttgcttacct ttggttaaat
     3061 tagcgcccat gacaatggaa aggtattatt tgtcatatag atagtggtac cgaaaagaag
     3121 ttttagagat agtctcaaat ggaatcatcc gtacaaatct agtctcattc tgatgaggca
     3181 tacaagaaaa agtatattga ctaggactct taatgaatct gacattggtt gaaagaagtg
     3241 ttgaaataac tttctcatag cttagagagt aattcttatc aatcttataa tttttgtcct
     3301 tcataattta ataaaacttt cttatacact gaaatttcat aatcaaacaa aactttcaca
     3361 aactttctta attcattaaa atatcgtagt caagtaaatg attcacctaa actctctatt
     3421 aaaatcttct ttatttacta ttgccttcta aaaatctttt tcaattcata tatataaaaa
     3481 cctgtctcat ccttcctaga ggcaggtttt tatatggctg tatttctgtt gtaggagaaa
     3541 gggatgggga gacagtaaga atgactccat ttcttttttg ggcaatataa gatttgtata
     3601 agctttttgt atttcttttg agttttcccg ttttgaaggg gtttggtgtg atatactgag
     3661 gctgattcta agggaaattg agactcatta gatggtttag tcaggcgctg aaatgcatac
     3721 tgaagtgact gctggcatca ggctgaggag aatttttgtg caacaagcac atgattcgat
     3781 tgagacctcc tatcggcagt tgctaagatg acatggaaaa atggctgcta ttttttagag
     3841 gatgcgagag gcttatctcg tatattgcag ttagagactg cctagctaaa tctagagatg
     3901 aggagaaatg gacgaatagg gataatctga cttatttgtg cattcattga ggaggaggat
     3961 ataaatataa actgttaatt taaaagtaat gacacgtaat ttgcttcatt tcaaatttaa
     4021 tgaaaggtat gtataatcaa gatgaacaag acgcttaagt taactgcagt ttccatgttt
     4081 tcggtggtat tcctagtagc ctgtggagtg gggaaatcga ccccgcaagc aacaccgcaa
     4141 actgatttcc attcctatat caatgctgaa tggttgaagg aaacaaaact gggagaaggt
     4201 caggcgcaaa tcgataactt tgctcaaatg acagacagaa cccaagaaaa aatccgagaa
     4261 atgattgacc agttggatga aaattatcaa caattgaaaa tcggaagtga agagagaaaa
     4321 ttgattgatt tttatcgttt agcggctgat tttgagacgc gaaataaact aggaattgaa
     4381 ccactcaaac cgtttctaga cgagatacag aaagcctcta caatggatga agtgagcaag
     4441 atttttgttt ctatgtatgg taaaaatatc cgaacactca tcaattttag tgtcactcag
     4501 gatataaagg atagtaataa aaattctctc tatattgatc ctcataaatt aagttttgcg
     4561 aaagaaaact atgaagggac tgatgatttt tcaaagaaaa gtcagaaagc ctttaaagag
     4621 tatttacaaa aaatctttta cttgataggg gatgattcta aggaagccgc tgcaaaggca
     4681 gagcttgtat ttaacttgga aaaagagatg gctttagtgc agcgtccaaa gaaagaggca
     4741 gataattttg atgcgaggta taatcaaaag acctgggatg aggtgaaagc attagcacca
     4801 aatctaccaa tttcagcact tgcttcggaa ctggagcttg agcatgctgc aacaatggta
     4861 gtatcagaac cagatgctct taagaaatta aatgaattgt atcaaaaaaa gaaccttgca
     4921 gctcttaaag ctctgctcca atatcgtttg attgctcact acagcaatta tttatcagaa
     4981 gatattattg aagccaaggc aacttatgag ggggcaatgg aaggggctgt aaatattcca
     5041 agtcatgatg aagttgtcga atctgctgtt gatgaaaact ttgcggactt gattggcaaa
     5101 ctttatgtga agaatcattt ttcagaagaa tctaaagcag atgttctcaa aatggtggaa
     5161 gaaatcaagt caacctatcg cgaacgtatc caagcagtac agtggatgtc tgaggagaca
     5221 aaagcacatg ctcttaaaaa actagatagt atgggcgtta aaattggtta cccagatcag
     5281 tggaaagact atactaattt tagcatccaa gccaaggagg atggaggtag tttgctatcc
     5341 aatattgata cgattcggat gagcaaattg aaagaagagt ttgctgagct taacaagcct
     5401 tttgataaga ctcactttgg gatgcctgcg cacgctgtca atgcttttta cagcccatca
     5461 aacaatgaaa ttgtttttcc agcaggtatt ttacaagcac ctttctatga cccatctgcc
     5521 agtccagagg aaaatctggg tggaattggt gctgttattg gacatgagat ttcccatgct
     5581 tttgatagag caggctcaca atttgatgaa aaagggaact tagtgaactg gtggcaacca
     5641 gaagacttgg aaaaattcaa agctaaggtt caacaagcag cagatattta ttcaaaattg
     5701 gaagttgccc caggatacta tgtcaacggg gagatttcaa cgggagaaat tattgctgat
     5761 ttgggaggaa tgacagttgc cattgatatt gccaagaaaa aaggctatga taccaagaaa
     5821 gtattcgaag cctacggaaa agtttggcgt gaagtaacaa cgaaagaatt tgccatagcc
     5881 aatattactg atgaacatcc acctgctaaa taccgtgtga ataatattgt gaatcagctt
     5941 gaacaattct atacagactt caatgttaaa gagggcgatc ctatgtatgt taagcctgag
     6001 gagcgtttga aggtctggta ggagtataaa aaatacaaaa tcattttaca ctgaaaagat
     6061 ccctttaata aggagagcct tgatttagaa caactaataa aggctctttt ttgagggggt
     6121 atattaaaga gtttatattt aaaaaggaga ctattatgtt attttcaaaa catcacacca
     6181 ttcgatttgt atctgttgta gcgcttttaa ctgctggact gggctcaatg cctactattt
     6241 tagcagagga aacagatgta gcaaccaaca agactgaatt ggatttcaga gcaaacacag
     6301 ttgacggtaa caatacggca tcaggtgaag gaaacatgcc tgatttagct aataagcctg
     6361 aatcggagac caatgttgct actaataagg agcaattgac tgggaaggcg attgagatta
     6421 ccgttcagga tgaagatgca actcccttat cttctcaatt agtagaatta aaaacctctt
     6481 ctaatgaatc ccttggaagt cgcttatctg atcaaaatgg aaaggttagc tttactgaca
     6541 aaatcgttga aggtactttc tatgaatact atgtcaatgg agagaaaatt ggagaggtat
     6601 tcgcaggaca gtctcgtttt gcctatcttt cttcagataa aattgtaaag gaagaggctt
     6661 catcttttag cagtaagaaa gaagaaactg aagaaaaagg atttactttt acagcaacca
     6721 ttgtcaataa aaacggaaaa gtattagcag ataaggaagt ccagatagtg gatacctcaa
     6781 caagagaaca caaggtagtc gctaccaata gaacaaacgc caaggggcag gctattttta
     6841 atcatcttcc cttaaatatt aatttgagtg tagttgtaga tggagttgcg caggggtata
     6901 ccctccgtgc caatggaagt gagagtcagt tgggctctag ctttattgct gagggggagg
     6961 ggactgttga tccagaattc agcatgacac cattgacagt agtgattcgc aatgcaggag
     7021 ctaatcctgt aagcgggcaa gaagtgacct tggtggacaa aataggtcgc tcaattggaa
     7081 cgcagcggac gaatgcagat ggaaaggcta tttttaaaga ggggttgctt gatggtacct
     7141 tctatacagt actggttaat ggtaaggtga tgtctgaagt catgacaggt atggaacgca
     7201 gtatttactt gtctaacaag gaaattatca agccatcacc tgcggaaaaa cctcagataa
     7261 agacagaggc cctcatcaaa gaaaaatttc tgtcagacag gggaaaaact caaccaaatt
     7321 ctggcagtaa aaaggaaaac atgtcagaaa aaatggattc caacaaaggt aaagaaacaa
     7381 gtagtaataa gatggatacg aaaaaatctt ctgctactat tgaaaaaaca gagaagaaag
     7441 aaaatcggga tcacagaaaa atgctaccta atactgggga gaaaaatgga attgcgaccc
     7501 tactaggatt tctgctactt ttggtcttcc cattcctacg aaaaaagagt agaaaaaatg
     7561 cataaggtcc agtttgtagc aatttttaag gggaaaattt gaacaattct cgataataga
     7621 gtaagcgtaa acaaacaata gatgaaacat aaatgaattt aaggattcca tgataaaata
     7681 gattatgcaa acatatcgcc atccatagta tgttttgcac ctaagttggt acatagtagt
     7741 tggtgtagtc acatgataaa gaagatatgt ggactaccta acaggaatta tgatacaatg
     7801 tctaattttc atcctcatcc ttaggaatcc aattactata tttggataac aaccacctca
     7861 atgcgcacga tgaggtggtt gtttatttaa agagcgtctg tactgccatg cagaatagac
     7921 acaaactgat tgtgaaagtt tagaaactgg ctaatatcct cagctggata gaggtgattt
     7981 tagctcattt aaaatagttc tatgttttgt ctaagtattc tgtgtttctt ttgagtgact
     8041 tttctatata tctttttatt gtgatatact attgttgtta tctacagaga aggtaatgtg
     8101 aagttgtttt atgagagcaa ctttttataa gctaaacata attgattcaa agaaaagtct
     8161 gctataagga ctgtgttgag ccactattta tatgctgttg actggatatg atatgccata
     8221 gagttctatc ttagtggtag gaaatggagg tcttctgctc ccctgccttt caaacgggtc
     8281 tgaaagtata aataaaactc acatcacctt tagatggtta tgtgagtcat aaatgtgtac
     8341 gtattatatg tatatatgcc caaggactgt tagcccgata atatccgcta tggcatgagc
     8401 caagaagaac ggaagcatgt tttgaggttt tattttttgg tagagtagat ggaaaataat
     8461 tccaacgatt aatcctagtc cgataccaga aactagaccc tgataggtat ggaagctaca
     8521 acggataatc agtgagtaga gaaatgccca cttagcatgt tttggattac ccatcagaca
     8581 gataccaagg aagaaaatct cttcgtagaa tccatttagc aaggcataga atattaatga
     8641 atagctggct ttatctacca agtgaaacat tgatggtgtc gcaggtgcga taacttgatg
     8701 ggacacaagc tgaaaaacat ccatacagag ggctgcgaca atgaagatga cgatagtctg
     8761 tagtggaacc cacggtgtaa agagaattcg ttttttccac tgtgaaaagt caaaattacg
     8821 cagtagtaaa tagaagaggg caagagctaa ccatacaatt tgaatggcca ctgccttgca
     8881 gttatctaat gctgaaaaag tcagattttc ctgtagggtt ctcgtttgat cttgtagtgc
     8941 caggtattgg agtgtggagt tgaaaattcc ctcaccaaat aaaatcagac tcaggatgac
     9001 aatatcaaac cacttaagaa cagtcagttt ttcagaattc aagttgaaca ttagtagtcc
     9061 tttctttatt aatttaattt agtttagtct accaaacaat tctatacatg ttctcttcga
     9121 gatgtatttt ttatctgttt tttcaagata gtagatatat ataacaagag acacaagaat
     9181 accaatttat ttatatgttt taaaggagag tataatggcg aaaattatgg ttgtagaaga
     9241 tgatattgtt atcagtcaag tagtttgtga gtttctaaag gatcacggct atgaagtgac
     9301 ccatatttcc gacggaaaaa ttgcacttga aacatttcga gaagaatcat ttgatttgat
     9361 tgtattggac attatgattc cgtccatgac aggattggaa gtcctacagg agattcgtaa
     9421 gacatcaaaa attccaattc ttatgttaac ggcaatggat gacgaataca cacaattggt
     9481 tagcttcaat caactgatta gtgactacgt tgtaaaacct ttttcgccga ttattcttgt
     9541 gaaacgcatt gaaaatattt tgcgtggtga aggtgatatt atagaagcag ccgacatcca
     9601 aatccatccg tccagtggag cggtttatat ggcagaagaa gaagtgcaat taacgaaaaa
     9661 agaatacgag attttactgt acttggcaaa acgacgtgga aaaattgtca atcgtgatca
     9721 tctaatgctg ggaatttggg gctatacaga actggatagc cgagttttgg acaatcatat
     9781 caagaatcta cgtaagaagt taccatctct tcctttacga acggtaattg gtcgaggtta
     9841 tcaggttgag gaattctaac aatgggaatc gctagaaaaa acttcattgt tgttacggtg
     9901 atgataacct ttatttcttt gaccttattg ggactattat attatgccat gccgatctat
     9961 tataatcaag ttcggaaaca agaactcaaa gatgattata tgagagttgc gatgcaactg
    10021 gacgggaagc cagaagttga aattttagag aaaattgatg attacgatca gaaaactccg
    10081 aatatcatca ttactctatt ctccgagtca aataaaatta tctatccaga tcccaatgac
    10141 caagaggcca aaaagaacga ggaggagtat ttaaagaaag gaaattttga tgagtttggt
    10201 tcatggtcgg tagccataga atccgctgaa gggacgacct actatttgct gtttaattac
    10261 ggtttccatt ctctctcgga tgtcagtcag accctggtta ccttctatcc attcattctg
    10321 gtattgatca ttttgcttgc ggtttcctcg gcctttgttt atagtcgact ggctactcgt
    10381 agaatcgcag ctatttctgc aacaacccgc aaaatgcaat ctttggagcc ggggattaat
    10441 tgttctgtat ctggtgtgga tgaagtagca accctagcac aagatgtcaa tagtctttat
    10501 agtaaacttt tgaccagtat caaggaattg aaaacggaga acgagaggac tttagctcgt
    10561 gaaaaggaaa aatctgactt tctccgtatc acatctcacg aattaaaaac tccgattgct
    10621 agtgcgctag gcttgattga ggggatgatt cataatgtcg gtccctttca ggatcatgat
    10681 acttatttga agaaatgtag agaattgctg aaggaacaat ctaatttggt ttattccatt
    10741 ttagaagcaa ccaatctcga gatggcattg aaagatagca agggaagtat ccaattagat
    10801 gagttaatta aggattcatt ggcgagctat tttagcttag cggaagttcg tccctatcag
    10861 tttacagttg atttagctcc agttattatt gaaggaaatt cagtttatct actgaaggct
    10921 ataaaaaatg ttttggacaa tgcatttcgt tatacaaaaa ttggaggagc tattcatcta
    10981 caattaactg agcatcaatt aattattgaa aatgaagtcg agactgtact ggatgaggag
    11041 gaattgtcgc aaatcttcaa acctttctat cgtccagatt ttagtcggca gagaaaagat
    11101 ggtggaacag ggattggttt gttcattgtg caacaaattc ttgaaaaaca ccaatttgga
    11161 tatacatttt atgctgctga tgaaaagaca atgcgctttg ttattcaatt tgattcctag
    11221 attatcccat gatataaaaa aattttgaca gtaagaaata gatagcaatt gcttgtgact
    11281 agatagtagt catgagcatt ttttttattg aatgttggaa tattctattt gaatcttgat
    11341 gaggatgaga agcggagagt tcgatggata aagacgacat gcaaaaatat aaaaaataca
    11401 aaaaagatag accgaaggcg gggtgaaaat agttgtgact gatataattt ttttgccaca
    11461 gggtagaact ctgtgaattt gcaaagagaa gggaaggaca ttatgattgt cttttgggtt
    11521 attagtgttt ttgtattgag attgtatttt ttgaaaattt cgctaagaaa tgaacagcgg
    11581 attttagcaa atggtggttc tgaatacgga gtgcaaaata caaaattact aacagtcgtc
    11641 cacattgttt tttacttatc atgtttgagt gaggcagtgt taaaacaagc tagttttgat
    11701 ggcttgagtg tacttggact agcagtatta ttcttttcga tgatgatgct atgctgggtt
    11761 acaaggattt taggagatat ttggactgtt aaattgatgt tggtgaagaa ccatcgattt
    11821 attgatcatt ggctgtttcg aacagtaaaa catccaaatt atttcttaaa cattatcccc
    11881 gaactgatag gattgtctct gttatgccac gccaagtata gctttatcat cctattccca
    11941 atctatatgg ttgtactgtg cagacggatc catgaagaaa atatcttatt gaaggaagtc
    12001 attattccta atggtaaggt agagtctgct ggtgaaatgt tggagtgaag tgtgcggaga
    12061 gagatacaaa gatagaactc tacgagaaat cattctagtg gttacattaa ttagtttgaa
    12121 catcgttttt taggaattac tactgaccca aggaaggctg tgcatcggca attggtataa
    12181 gaacggtagg gtaatttcca gtttgaaaac aggtgtttta taaagattat gcgttttttt
    12241 aaaaggagca aattatgagc aagcaaaaag taatatcagg cttattatta agtacaacgg
    12301 tattgggtgg tttattactt tatccaacat cattggccaa agcagaaggg acggagctaa
    12361 cagaagtagc tgtgaccgaa gcaccaaagt caaatggtga agagattccc gtgacatctg
    12421 aaaatagtcc atctccagta ttggaggaag cggttatggt tacagatagt aatccttcaa
    12481 ctaatgctga gtcttctttg aaagaagagg aagataaaaa agaaaacgta gatttggaac
    12541 tagtttcaaa tgaagagcta gtttcattat cagaatcgaa aaacgtagta gagggggagg
    12601 agaaggaaga ttctacttta aaagttgaag atggaccgtt gcttcaggca actaatagaa
    12661 gttctttttt tggtgatcag gagtacttca aaaaatctgt atctataaat caagtttctg
    12721 agggaattaa caatactgaa attacatgga aagtggagtt tgatacagag aaatggtctt
    12781 ttgatcatca cagtggtggg gtttacttta ttatacctca aggcttaaaa ttgacgagga
    12841 tagttgagga aacgaaatcg agtgaaaatt tattggaaca atttcctaag aaagttaact
    12901 atccagaaaa cggcgagggt aacccttttc gtatatttag taaaaaagaa gaacctttga
    12961 atctcgagcg tagttttaat tctcaatggg gctggtctgc tggaaaagta ggtagtacgg
    13021 aaatggagaa atggaaagaa aacttttctg atatttattt tattgatagc ataaaaggga
    13081 ctggtaagat aaattatcag cttactgcta aagtgaatgt agatttgcaa tcaacctttc
    13141 cttttatcgc cgtgatgaaa agttttagat acgatacggt cactgccgca gggcggatat
    13201 tcaatgttaa aggaacagga aaaacgtctg aaagtaatac tatagctaag ccggcgttgc
    13261 ctagagttga atttattttt caagaggggg gaaatggtgc acttgatata ggagctacgc
    13321 atcgtattga taaaggagga ttttcagaag aaggcattac cggagaaaca tttggcgaat
    13381 tttttaagag agttggagct aatgaacgag ttgttccagc gccaggatat acttttgttg
    13441 gctgggcttt tgcaagaaat cctgatgaag tcattgattt ggagttaaaa atttccaatg
    13501 acctgccatt acttttggta ccggttatga caaaacaacc acaacccgaa acacctaaag
    13561 caccatctat tccagaaaaa ccgatggttg atccgaaggt atcggaaaca gagaagcctg
    13621 gtacaccaga acagccggaa gtaccagcgc caagtccatc tcctgaaagt cctaagaaag
    13681 aagacatggc tccaaataaa accaaagatg aggtatatga gccaattgtc caaacagata
    13741 aatgggtggt ttatcctgta ggaacttcga aggaagaagc agagaagaaa attcttgatg
    13801 cagtaacggt tcctaaagaa gcaggagaaa ctaaaaaaga aatcgtcggt gacgttccat
    13861 tggcagcagg gcaatacgga gtaaatgtaa aggtcattta cgatgataag tcgtacgatg
    13921 tcactttagt tgatgttcat gtgacatcta accagactga caaacagaat gaggatatgc
    13981 ctcaaagtcc agagcaacct cccatgtctg aaatgccaaa ggttgaacca aaagtagaag
    14041 aaatgaagcc ggaggttatg cctgagatac cagagcaacc acgtgaaccg aaaggaccag
    14101 agatgccgtc tcctgctcca gaacaaccta aaactccaga agtaccagat atgtcacagc
    14161 cagaagtccc taagagtgaa acacctaaaa tggaacaacc agaggtagtg ccaccgactc
    14221 cagagtcaga gaaaccacat gctcctatga aaccagagac ttcatctcca gagggaccag
    14281 agaagcctcg tgtaccagaa acaccagagg tagtgccacc gactccagca ccagagcaac
    14341 cacgtgtacc ggaaatgtca gaaacaccag cgccaagtcc agcacctgaa agtccaaaga
    14401 aagaagaaat ggtgcccaac aagactaagg atgaacttta tgaaccgatt gtttcaatgg
    14461 ttgactgggt agcgtatcca gtaggaacat caaaggaagt tgcggagaaa aaaatcttag
    14521 atgctatcac agttcctcaa gaagctggtc cagttacaaa agaagttgtt ggagaagttc
    14581 cgctagtaga agggcaatat ggggtaaatg tgaaagtcat ctatgatgat cattcttatg
    14641 acgttgtctt ggtagatgtt agagttacta aagagaaatc acacatggac atgccgcagc
    14701 cagaagctcc taagaaggag acacctaaac aggaacaacc agagatggtt attcctgagg
    14761 agaaaatgcc taaggtagat aatccaaaac aggatacacc aaagttagaa caaccaaaag
    14821 tagagactcc gaaagaagag attccacaaa ctgaaactcc taagattgag gttcctaaag
    14881 aatctgaaaa agaaaaatct gatattcaga aaatggctaa gccaaaacaa gaagatcaga
    14941 tggcaaaaga atctcaaaaa atggataatc cttctgagaa gatgaaacct aagtcacaag
    15001 gggcaaaaac aacagcacca gcggtcaaac agccaatggc tgaaatgtca gatggtaaga
    15061 aacctcagaa gagcaaagag actttgccaa atactggaga agcaggtggc agcttaactt
    15121 ggttaggagc agccctggcc actctttcaa cttttgtgta tgtatttaaa aacaaaaaga
    15181 aagaagagta atttctttta aattagcaat cgtagctacc aagtatgaaa attataaaaa
    15241 gttcctgagc tcaaatgtac tgactcagga atttttttga tttggcacca gctagggtca
    15301 ctactagtca accaacaaaa ataaataaaa aatagaacat gggcagggtg aaaatggatt
    15361 gacttgatat actaagtctg taattcaata gtagaaggag ggattatcgt gattattttt
    15421 tcagtcggtc tggttgtttt gctgaggcta tattgtttga gaatagctct tgaaaatgaa
    15481 gagaaaacag tatttactgg tgggatagaa gacagtatcc acaatgtcag atggctgtta
    15541 gttgcacata tggtatttta cttctcatgc ctatgtgaaa cactgataaa acagccccta
    15601 tttgactggt ttagtggact ggggttcgtg atgttattct ctgcgatggc aaccttatat
    15661 tatctgagaa gacttttagg agacaagtgg acagttgggc aactattcgg ggaaacctac
    15721 tatcctattc atcattggct atttcaaacc gtaagacatc cgaatatctt tctaatcatt
    15781 attccagaat tagtagggct tgccttacta tgccatgcga aatatagttt aatttttctc
    15841 tttccaatct atatgaggat tttgcatgga cgaatacgag aggaaaatct gctggtaaaa
    15901 gaaacggtcg cataaaatag caggatagat tttggaagga aaattgccga aaataattaa
    15961 tgaagtgagg ttaatgtatt ttatgaaaaa aacaaaaatg atagctggat tactagtaag
    16021 tagcgcccta ttaggtgcta caatgactac gaatgtatca aatatcaagg cggatacgga
    16081 ggcatcaacc gatgcaagcc ttgtgacaat agaatctaac caaacgttag aagaacagcc
    16141 attgacggtt gaagagcaag ctacaaaagg agctgagaat ggagaaaatc aagacgatga
    16201 agatccaaac cagtctgcta acctagagga aatcgagaat gtcatttctg agccaaaggc
    16261 tgaagcaacc ccagaaacaa aggttgagga ttcaaccctt tctgaattta caccgcgtgc
    16321 tgtaaggtca gctgaaaata atttggatat ggaatccctc cctgttactc cagaattgcc
    16381 gaatgagaaa caaccggctt atatccaaga tacgaactat ccaggcaaac catttcaagt
    16441 acagcaatcc gttttgatag aagcaacttc cgtaaccgat aaaaaaattg agtggaaagt
    16501 gactttcaaa tctagagact gggcattcta tgaatcaatt ggtggatact attttatcat
    16561 tccagatggc ttaaaactaa ctaagttagt agatcagagt aacacggata ttttaaatca
    16621 ctataagtca gaaggtgctg gtggagatga gtatagggcg tttgaaaatg gaaagggaga
    16681 atttgatgcg caatggggct ggtctgcagg gcttatggac aatgctatat ttaataaatg
    16741 gaaggaagaa aatcgtttct caaaaattct ctttcgagac taccgcagag atgtacagac
    16801 cgttacttat aaattagaga cagaaataga aaaacaatca gaaaaaccct tctctctcat
    16861 cgcagtgata aagaatttta ataagtatac tcactatatt tatggtaacc aaattgcttc
    16921 tgctgcggga ttagaggtag tggctccacg aacagagaag gttcctaaag agaagaaaaa
    16981 gaatgaaggc aaagagcgaa agaaagatcg ttcgaaaaag aaccgtcact cacataaaga
    17041 gcataaaaaa caacatcgga ccaaagaatt aactgggcgt aaaaaataga ttggcagtta
    17101 atattggctg tatgaataga ctgtattgat aaaagctcct gcattttaca ggagctttta
    17161 ttgatagcat cgaggttaag gattctctac ggagaatgta tcggcgtgag caaggtcacc
    17221 ataggtataa ccgagattaa accatttttt cctttgctca gaagtgccgt gggtaaaact
    17281 gtctggaaca gtacgaccgt aggcttcctg ttgaagagta tcgtcaccaa ctgcatgggc
    17341 agcattcata gcttcgtcaa tatcaccagc atccaagatg ccttgtccat caacatattt
    17401 ggcccaggct cctgcataat agtcagcttg caattctaag cgaacattta gcgcattgcc
    17461 ttctttatcg gatagttgag cccgtttttg atggtaggcc ccaagaactt ctaattcatt
    17521 ttgaacatgg tgaccaactt catgagctat gacataggcc atggcaaagt caccagcagc
    17581 cttatacttg ctagataatt cttgatagaa ggaagtatca atataaatct tgcggtcagc
    17641 agagcaatag aatggaccgg cttgggcgga accaactcca catccggttt gggtctggtt
    17701 agtatagaaa accatagtcg gtgcattgta ggttaaacca ttggctttaa attcttggac
    17761 ccaaaaatct tctgtcgatc ctaaaacctt actcatgaat tcagcatctg catcagacac
    17821 atctgtacca gtcgttgtga cttgactcga ttggtaagga ttagtccctg ttgatgggga
    17881 aagcagccca ccaaggtttg acatgcctcc gaaggctact aaaaggacaa gaacaagtag
    17941 ttttcctttc caaccaagtc gtgaaaagag tagtcccaat agaacatttc cgccagatga
    18001 accagacgag aaagatgagt tagaactgga ttgtcccctg cggtcctcaa tgttagaact
    18061 ttttcgtaaa tcatcaattt tcatataaat ctccttagaa cctatcaaca agttcttata
    18121 ttctcacaaa ctattatata gcaaattgtt gaaaaaaaca caggaaagct atcggaaata
    18181 ataggcctag ttctgtataa aagtgcaaaa tttggtataa tagtagggat acaatataga
    18241 aggagtggac atggttgaat atttatcggt tagtcatcta actaagtatt taaaattaaa
    18301 gtttgaccgc gatccgtatt tggagaaggt gtatttgaca ggtcaagtgt ccaacttccg
    18361 taaacgccct agccatcaat atttttcgct caaggatgac aaggcagtca tccaagcgac
    18421 catgtgggca ggcgtctata agaatctggg ctttgagctt gaagagggaa tgaaaatcaa
    18481 tgtcattggg cgcattcagc tctatgaacc aaatggttct tattccattg tcattgaaaa
    18541 agcggagcca gatggtattg gagccttggc aatcaagttt gaacagctca aacaagctct
    18601 gacacaggaa ggcttattta aagaagaatt caagcaagcc ttgccgcggt ttaccaagaa
    18661 aatcggtgtc attactagtc caagtggagc cgttattcag gatattatta caaccgttag
    18721 ccgacgtttt ccaggcgtag agattgttct ctatccgacc aaggtgcaag gagatggtgc
    18781 tgctcaggag gttgttgcca atatccaaag agccaatgaa cgagatgact tggatgttct
    18841 gattgttggt cgtggcggtg gttctatcga agacctttgg gctttcaatg aagaaattgt
    18901 ggttcgggct atttttgaat cccgtattcc aatcatttcc agcgtaggtc atgaaaccga
    18961 tacgaccttg gctgattttg tagcagataa acgagctgct accccaacag ctgccgcaga
    19021 attagcaaca cctgtgacca aggcagactt actgggctac ctcaatcagc aggaaaatag
    19081 agcctatcag gccatgacta atcgtttgag attcctaaga ggtcagcttg aaaaaattag
    19141 ccagtcagtc atgttccgcc agcctgaacg cttgtatgat ggttatttac aaaaattaga
    19201 ccgcttgact aatcaattgc agacacggat gaaagaactc tacagccagc agaaacaggc
    19261 tagtctctta ctacagcaac gattacaagg tgtgcaccca ggtcgtaaag tagagagttt
    19321 ccaagagaga attatccagc aggaacgact cttgaagagc aatatggcta atatctatga
    19381 caataagatg gccaaggcgg acaagctgat tgaggccttg actatgctgg ataccagtcg
    19441 catcgtggcc cgtggctacg ccatgattcg tcaagatggt cgggtgatcg atagtgtaga
    19501 aaatgtacaa atgggtgaaa acctaaccat ccagatgaag gatggtcaac ttgatgtgga
    19561 ggtaaaacat gtccaaacag acgaaaacat ttgaagaaaa cttagctgaa ttagaaggaa
    19621 tcgtaaccaa attggagcga ggcgatgtgg ctttggaaga agcacttgcc gagtttcaaa
    19681 aaggaatggt cctatcgaaa gacctacaaa agacactagc agaagctgaa aagaccttgg
    19741 tcaaggtcat gcaggcggat ggcagtgaag cggagatgga ctaatggttg ccagtaaatt
    19801 gcagcgactt gaggaagcca tggcagactt ttaccaacct caggtagctg aacgcctcaa
    19861 ccaatcggtt ctttattcgc tacaggctgg tggtaaacga atccgcccct tgcttttatt
    19921 gaccatctta gagtcctttg gaatggaatt aaaacaagcc cattaccaag tggcagcatg
    19981 tgtcgagttg atccatacgg gaagtttgat tcacgatgac ttgcctgcta tggataatga
    20041 tgattaccgt cgtggtcgct tgaccaacca caaggtttac gatgaagcaa cggctatttt
    20101 agcaggggac agtctctttc tagatccatt tggtttccta gcccaagttg atttaccagc
    20161 tgagaccatc cttgctctcg tgagagagct ttcccaggca tctgggacct ttggaatggt
    20221 tgctggtcaa gtcttggata tggctggtga agggcagaat ttgaccttag agcaattaca
    20281 agccattcat gccaataaaa ctgggaaatt attgacattt ccctttgtag cagcaggttt
    20341 gattgcagga caatcagatg tggtaatcaa ccatttgcga caagcgggtc aattaattgg
    20401 tctagccttt caagttcggg atgatatttt ggatgtgaca gccacttttg aggaaatcgg
    20461 aaaaactccc caaaaagatg tattggctga gaagtctacc taccctgccc taatgggatt
    20521 ggaagcctca aaagtctttc tagaagatag cttgaatcaa gcaatcaacg agctagatca
    20581 agtggctaaa caagtcccat tttcaacaga aaaaatcaaa gaaatcatag aaagtttacg
    20641 aatcaatggc taaggaaaga gtagatgtac tagcttttaa acaggggctt ttcgagacgc
    20701 gggagcaggc caaacgcggt gttatggctg gcttagttat atccgttatc aacggggaac
    20761 gctacgacaa accaggagag aagattgacg agggaattga actcaagctc aagggggaaa
    20821 aactcaagta tgtcagccgt ggtggtctca aattggagaa agccttgcag gttttccaat
    20881 tatcagttga gggtcaaaca acgattgata ttggggcttc tacaggcgga tttacggatg
    20941 ttatgttgca ggctggtgcc aagcaggtct atgctgttga tgtcggtacc aatcagctgg
    21001 cctggaaatt gcgtcaggat gagcgggtta tcagcatgga acagtataat ttccgctatg
    21061 ctgagttggg agatttcgaa cttggtcaac caagttttgc gtccattgac gtcagcttta
    21121 tctcattgag tttgattttg ccagcactcc atcgtatttt agcggagggc ggccaggttg
    21181 ttgctcttgt caaaccccaa ttcgaggctg gacgtgaaca gattgggaaa aacggcattg
    21241 tcaaggataa atccgttcac ttgaaagtat tggaagatgt gacaaaaatg gccgtggaaa
    21301 caggcttctc agtcaaagcc cttagctttt cccctgttca aggcggtcat ggcaatatcg
    21361 aatttttagc gcacttagaa aaatcaacac aaccaaacca gattgataaa gaggtcataa
    21421 caactacagt ctatcaagca catgaggaat ttaaaaagga tgaataaacg agaacgatta
    21481 gaagtcatta aagatttggt agtccgattt cctattgata cacaggaaga aattgttgaa
    21541 cgtctagaag caatgggtgt caatgcgaca caagcaacgg tttcacgtga tatcaaggaa
    21601 cttggcatta ttaaggttcc atcagcagat aagggatata tttatggttt accaaaggca
    21661 ggtcttgtta aggtaaaatc acagaatgtt tttgaagtct cagtgatgga taaaatgatt
    21721 aatctccgtc tggtacctgg aagctctgct gtggtcaaac gccagatttt ggaacaattt
    21781 caagaacatg ttttttcagt gattgctgat gatgacagta ttctgctcat tgttacaaac
    21841 gaaggtatta tttcgcaaat cgaacagacg gttagagggt ggtagccatg ttactagaag
    21901 tgtccattaa aaacttcgcc attattgagc aggtatcact gaattttgaa aacgggatga
    21961 ccatcctatc tggtgaaaca ggtgcaggta aatccattat cattgatgcc atgaacctga
    22021 tgttaggggc gcgtgcgacg acagatgtta tcagacatgg ggccgccaag gctgagattg
    22081 aagggctttt ttcctttgaa aatagcagag ctctcgagca gattttgctt gaacagggga
    22141 ttgaagtagc tgacgagctc attatccgtc gggaaatcct acaaaatggc cgttcggtta
    22201 gccgtgtcaa tggacaaatg gtcaatttat ctgttttgaa acagattggg caatatttag
    22261 tagatattca tggtcaacat gaccaggaag aattgatgaa atcccagcac catatccgtc
    22321 ttttggacag tttcggagaa gatgaatttt ggagtcttaa agaccgttat cagacaacct
    22381 ttgatgccta tcgtagtctt cgcaaacgag ttcttgaaaa gcaaaaaaat gagcaagaac
    22441 acaaggcgcg gattgagatg ttggaatacc aaattgctga aatcgaagca gctgatttga
    22501 agtctggtga agatattcaa ctcaatcagg aacgagataa actgctcaac cacaaacaaa
    22561 ttgcagatac actgaccaat gcctatgcac tgttagacaa tgaagatttt tcaagcttga
    22621 acaacctacg ctcagctatg agtgacttgc aaagtctgga agaatttgat ccagactaca
    22681 aacagctctc ttctagcctg acagaagctt attatgtcgt tgaagatgtg accaagcgtc
    22741 tcagcgatgt ggtggacaat ctagactttg acggcaatcg tctcttgcaa ttggaaagtc
    22801 gtctggattt gctcaatacc attacgaaga aatatggtgg aactgtcgat gatgttttgg
    22861 actattttag taaaatcagt gaagaataca atttattgac aggcaatgat ttatctggtg
    22921 atgatttgga agttcagctt aagaacttag agaaagaatt ggttgaacga gcaggtcagc
    22981 tcagccaatc acgccatgaa ttggctgttg ttttagaaga tattattcgc caagaattgc
    23041 aagacttgta tatggagaaa gctcgtttcc aagttcgatt tactaaagga aaatttaatc
    23101 gagaaggaaa tgaaacagta gaattttaca tctccaccaa tcctggcgaa gacttcaaac
    23161 cactggttaa ggtggcttct ggaggagaat tgtctcgttt gatgttggcc attaagtcag
    23221 cctttgcccg taaagaaggt aaaacttcta ttgtctttga tgaggtggat acaggggtgt
    23281 ctggacgtgt ggcccaggca attgcccaga aaatttataa aatcggacaa tatgggcaag
    23341 tattggcgat ttctcatcta ccacaagtca ttgctattgc agattatcag ttctttattg
    23401 agaaaatatc cgacgaacat tcgactgttt ctcgtgtccg tctcttgacc aaagaagagc
    23461 gtattgagga aattgccaag atgttagccg gtgacaaaat cacagatgca gcccgtaatc
    23521 aagcaaaaga attagtagaa aaaggttagg cgactagcct ttttgcttat gtccaaagtt
    23581 tattttttag ttaaaatttg ttataataga tggcaaaatt gaagagaatt gtaggatgaa
    23641 atatgtcaaa gattaagatt gttacggatt caagtacgac tatcgaaccc agtttggtcg
    23701 aagaattgaa tataacagtt gttccattat ctgtaatggt tgacggagtc gtatactctg
    23761 acaacgattt aaaagaagga gaattcttag agctcatgcg tgggtcaaaa aacttgccaa
    23821 aaacaagcca gcccccagta ggactctttg cggaaacttt tgctgacttg gctaaagatg
    23881 gcagtcagat tattgccatt ctcttgtcgc atgccttgtc agggacagta gaagctgcta
    23941 gacaaggagc aaccctatca ggtgctgatg tgacaatact cgattcaagc tttacagatc
    24001 aggctgaaaa attccaagtt gtagaagcag cacgcatggc acaagctggt gccagcaaag
    24061 aagaaatcct tgcagctatt gaaacagtca aagaaaaaac ggaattatac atcggtgtat
    24121 caaccctaga aaatctagtc aagggtggtc gtattggacg tgttcaaggg atgctgagta
    24181 gcctactcaa tatccgtgtc atcatggaaa tgaaagacca tcagctgact ccgattgtca
    24241 aaggacgagg taataagacc tttaaaaaat ggctggaaga gttcacggca actctagcag
    24301 ataaaaaagt agccgagatt ggtatttcct attcaggaac ggctgatttt gcaaatgaaa
    24361 tgaagagtca attacaagag tacgtctcaa aagaaatttc tgtcttagag acaggttcca
    24421 tcattcaaac tcataccggt gaggatgcct gggccatttt gattcgttat gaataacagg
    24481 aagttgattc aaggctttgt tttctttttt ctggtaattc tagggtcgat ttttctattt
    24541 catcaactca ttcctgttgc ctcatctcgc atctccagac aagagcttac cgtatcagaa
    24601 aaaatcagtt ttcgatatgt ggcacttggt gattctttga cagaaggtgt tggagataca
    24661 actggacagg ggggctttgt tcccttgttg gctcaatctc taactaacga ttatggttat
    24721 gaagtagatt ataaaaattt cggagtttct ggaaatacca gtaatcagat tcttaagcga
    24781 atgaaggaag atggagagct gataagctac ttaaaaacag cagatctgtt aactctgaca
    24841 gttggtggca acgatttgcg caaggctatt attaaaaaca ttgccaatct caaagtttca
    24901 acttttgata agcctgcaaa agattacgga aaacgattgg atacaattat taagacagcg
    24961 cgtaagaata atccaaatct tcccatctat gttgtcggga tttacaatcc actctacctc
    25021 aattttcctg aattgacaga aatgcagaca attgttgata attggaatac gatgacagaa
    25081 cagataactg aaaaatatca acatgtctac tttgttccga tcaatgattt gctctataaa
    25141 ggattggaag gggaggctgg tattagtcaa aatggtagcc aagttaccaa taatttactg
    25201 tatgaggaag acagtttcca tcccaataat actggatatg agattatgaa aaaagcgata
    25261 ttggagagaa tgaatgagac cacggaaagc tgggaacctt aatatttgga aatggctatt
    25321 tttagcccag ttggctttat tgattggttg cggaatagtc ctctatacac ggattcaaac
    25381 agatagagag gatttaacaa agctcgttca gactagtaca gaagatacca aggttgggac
    25441 cttctccact aacagggaac agctcaacca aaccctcact aactatctaa aagagtatca
    25501 gacggaagag ttttcctatc aattattcgt aacgagtcag caagttgttt ttgaaggcag
    25561 ctatcagatt tttggtgtga ctatcccact ctatatttat tttcaaccta gcaaaacgga
    25621 agatggcagt attttgttac ggataacaga aatatcagtt ggaagtttat ccttgccgaa
    25681 agcagaggta ttagcttatt tacaaaaaaa ttataaacta cctgcctttg taaaaataga
    25741 ctcagaacaa gcgcaagtac aggttcaact gacagaactg aagaacaaat ttggtctgta
    25801 tggaaaggcg aatacgattg atttgtacaa tgaccaattc attgttgata tctacagaaa
    25861 aagacagtaa aatagcatta aaaacttgac caaacgccta aaattcggta ctatatagaa
    25921 gtgagtaata actcagaaaa ttattggagg acttagcaaa tggctaataa acaagatttg
    25981 attgcaaaag ttgcagaagc aacttcattg actaaaaaag actcagcagc agctgttgat
    26041 gcagtattcg gagcagtagc agactacctt gcagctggtg aaaaagtaca attgatcggt
    26101 ttcggtaact ttgaagttcg tgagcgttca gcacgtacag gccgcaaccc tcaaacaggt
    26161 gcagaaatca aaatcgcagc atctaaagta cctgctttca aagctggtaa agcacttaaa
    26221 gacgctgtaa aataattcag catcaaaaag cccgtcatat caagctttct agcttgtccg
    26281 acgggctttt ttctgtgttt tggggctccc agagtcagtg gagtgactct gggaggttgg
    26341 aaatgaagca aaagcatttt gcgcaaaaga gggagaagct ttagtaattt tctacactac
    26401 acattctcgt tttaagacaa caaaaaacca gccttggcca gctgattttt taggagattt
    26461 atgaaaaatt ttaggataca cctatagtat actcgaattt tcagattctt catcggtctg
    26521 tagacctatt ttgttaaaaa atgaacatgt gctataataa taaaaactca aaaggagagt
    26581 attatgacaa tccgtaaagc tagacaatct gacattccga tattaaatga attgcttcaa
    26641 gatattttac aggtgcacca ccaggcacga ccagatattt ttaaaagtgc aggtcaaaaa
    26701 ttttctgagg ctgaattagt agcacttttg gaaaatccag ataagcctat ttttgtcttt
    26761 gagctagacg gtcaagtggt tgggcatctt ttttgtgaat tatctaccgc aacaggcgat
    26821 gttttagaac cagttaaaac cttgtttatt gatgatttgt gtgtagccaa ttcggcgcgt
    26881 ggtcaaaaaa ttggtgagca actgtatgaa tttgctcttt cctatgctaa ggagcagggt
    26941 tgccacaatc ttaccttgga tgtatgggct gacaatgcag gagctgtccg tttttatgaa
    27001 cgccaaggaa tgaaaccaca aaagttccgt atggagcaaa taataaatta aaaaagaggg
    27061 agtccctctt ttttaatgtt ctctcatttt tgccaataat ttttgagcag tttctaggtt
    27121 gctgtgcttt tctttccgca ggagttgggc tagttggtct acttcatgct cctcggcgcc
    27181 agcaagtagc gctagggatt ttgcgtggag cttcatgtga ccagcctgaa tccctgaagt
    27241 aacaagagca cgcagggcag caaagttctg acagagaccg acagaagcga tgatagaagc
    27301 taattggcgt gcctttggtt gttggagaag gtcaaaagcg actgctacct ttggattgag
    27361 gccgatagag ccaccgacgg aggcaatcgg aagaggtagg gtgatggagc cgaccaagtg
    27421 ctcgccatca atggaccaag tagaaagccc cttgtattgc ccatcacggc tggcataagc
    27481 atgggacccg gcttcgactg cccgccagtc atttcctgta gcgataacga cagcatctat
    27541 accattaaaa atccctttgt tatgtgtcgc agcacgataa gggtccactt gcgctagttt
    27601 gcttgccagg gctatttttt gagcagtttc ttgagcaatg gcagagctgg tagccagact
    27661 agagatggca atatggcatt gggcggtaac cagtgactcc gttgcatagt tggagaggat
    27721 tcccatcaaa gcctgtccct tgctgagctc ttttaagtcc tccttaacag cttctaacat
    27781 gttattgagg atattggctc ccatggcttc ttgcacatca acctgaagat agacaatcaa
    27841 aaactcatcc ttactctcaa cagtcaattc tcttgcacca ccccctcgtt tgacaatgga
    27901 agggtgcgct tgattggcag tttctaaaat actctccttc tggtcaagaa tcgcctgggt
    27961 cgctctgcta tggtctgaaa tatcgtagag agcaacttgt ccaatcatga tacggttatg
    28021 aatattcgtt gtaaaaccgc cagatttagc gatgattttg gctccgaaag acgcagctgc
    28081 aaccacagaa ggttcttcag taaccatcgg tacagagtaa gtttgtccat ccattagaag
    28141 ttctggaagt acagaaaaag gtaaggaaaa cgttcctaga tgattttctg ccatctttcc
    28201 cgcaattgct tctggcaggt tttcgtcttt gtatagaatg tctaagctat cttcggatag
    28261 ggaacgattc tgacggagaa tatcaatgcg ctcttggcgt gattttttat aaaatccgga
    28321 aaaagttgac ataggttcct ctttctatag gaaagcgccc cttggtgaga gccaaagggc
    28381 gccgttttgg cttttattta cgatagatac gtttgtgatt gtccactttg ataagggcaa
    28441 agggactttg gtcttctggt aggtcaaggg atgaaccagt ttcatcaagg gtaatttctt
    28501 caaagaagac ttgttcatat tccttaacgc tgagttttgt acgctgattg agttgttcta
    28561 aacgattttc ttgtaagtgg ttgcgataac cttcaacgag ttgaccgctg aaaatttcac
    28621 agacagcgcc gctaccatag ctataaaaga ggatttgatc ccctgtctct aacgctctgc
    28681 tattttccaa aagggaaaga agagagagga agatagagcc agtgtagatg ttgccgacga
    28741 ctttattata gacgatagct tcctggaaac gttctgtcaa gcgactaaga gtttcttcat
    28801 cctgagcaat agcttgcagt cctttaagac cttgtttgga gaaagggata tgcaagcaca
    28861 tggcggcaaa atcgttgagg gttttgcctg ttttttgttg atagtagtcg aaagttgtcg
    28921 tcaagcaatc ggtgtactgt tcagttgaaa atttaccatc aacacgtgga tatttgtcgt
    28981 agttaggacg ccagaagtcg tagatgtcac gtgtctggca gacattatca ttgttgagga
    29041 ccaaaattcg tgggtttgcg gttactaaca tggcaactgc accagcacct tgggtaggtt
    29101 caccgccaga agcgactcca tactttgcaa tatcactagc aatgactagg acttttgatt
    29161 ctgggaattg agcgatatgg cttttggcaa gacttagtcc agccgttgca ccgtaacaag
    29221 cctccttcat ctcgatggag cgagcgaagg gctgaatacc aagtaatcca tgaatggtga
    29281 cggcggcagc cttactttga tctacgctag attctgtacc gacaataacc atgtcaatgg
    29341 tttgtttatc ttcttctgtc agaatggctt cggcagcctt tgccccaaga ctgataatat
    29401 cttgagtgac aggagctaca gccatttcag actgaagaag accaatctta aatttatttg
    29461 ggtccacatt gcgggcttgg gctaaatcag ccaaatctaa aacataatcg ggtgccgcaa
    29521 atccgatttt atcaataccg atgttcataa tatatccttt gtgtacaaat gataggttaa
    29581 cttgtttgcg cattggaaac gattagggag atgccttgac cgcctccgat acaaagtgag
    29641 caaagaccaa gctctttttc ttgcttgatt aattcgtgaa tcagagtgac taggattcga
    29701 ctaccactag ctccgattgg atgtccaagg gcgatggcac caccattgac attgactttt
    29761 gcaggatcaa tgccgagttg tttgacaact ggaattgatt gggctgcaaa tgcctcgttg
    29821 agttcgaata gatcgatatc ctcgactgtt ttattcagtt tttgtagcgc tttttggcta
    29881 gcagtaatag gtccaagccc cattaatgca ggatctaaac cgcttgttgc ataggcctca
    29941 atataggcga gtggctggat atttagctca ctggcttttt catcagacat gagtaccaag
    30001 acagcacagc cgtcgttgat gccagaagca ttggctgcgg tgacggttcc atccttttta
    30061 aaagatggcc gaagtgttgc caatttttca attggcgtca gacgagggta ctcatctgtg
    30121 gcaaaaatag tttcgccttt ccgatttttt aatctaatag gaacaatttc gtcaacaaat
    30181 cttccctcag caatagcttt tgcagccttc tcttggctac tgtatgtaaa agcatcttgc
    30241 tctgcgcgac tgacatgata gcgttcagca acattttctg cagtaatgcc catgtgatag
    30301 tcgttgaagg catctgtcaa accatctgtt aacatggaat cttccagact aatatgacca
    30361 aatttactac caaaccggct agttttggat agataaggtg cctggctcat aatttcaatg
    30421 cctccagcca caactacatc attgtcacct agcatgattg actgggcagc taggaggact
    30481 gatttgagac cggaaccaca gactttattg actgcatagg cagaggctgt ctgaggaatg
    30541 cctgcacgaa tagcaatttg acgtgcaata ttttgtcctt gtcctgctga aagaacattt
    30601 ccgaagataa cttcatcaac gctgtctgca gggatgtttt tattagctaa ggctgtttcg
    30661 aggacttgcg cccctaaatc agcgatttca atatctttca gactacctcc gaaactgccg
    30721 atggcagaac gataggcaga cacgatagct acttttttca tgataactcc tatagtggta
    30781 tcgttttgaa ctgtcgtgtt cagccttact attataccat tattttgtat tttttctaag
    30841 aagaaagata ggtctagaga ctgaatttac atgaaagagt aatgaaagcg tacacagatt
    30901 gtggaaaggc tggcattttt ttaccttttc gtgtaaaata gagaagtata agaggggaac
    30961 ctcaaaattt aaaggagaat ccataaatgg taaaattggt ttttgctcgc catggtgagt
    31021 ctgaatggaa caaagctaac cttttcactg gttgggctga tgttgatttg tctgaaaaag
    31081 gtacacaaca agcaatcgat gcaggtaaat tgatcaaaga agcaggtatc gaatttgacc
    31141 ttgctttcac atctgtattg aaacgtgcta tcaagactac aaacttggct cttgaagctg
    31201 cagatcaatt gtgggtacca gttgaaaaat catggcgttt gaacgaacgt cactacggtg
    31261 gtttgactgg cttgaacaaa gctgaagcag ctgctgaatt tggtgatgag caagttcaca
    31321 tctggcgtcg ttcttatgat actttgccac cagaaatggc taaagatcat gagcattcag
    31381 cacacactga ccgtcgctat gcacaccttg atgattcagt tatcccagat gcagaaaact
    31441 tgaaagtaac gcttgagcgt gcccttccat tctgggaaga taaaattgct ccagcattga
    31501 aagacggtaa aaacgtattc gtgggtgcac acggtaactc aatccgtgcc cttgtaaaac
    31561 acatcaaaca attgtctgat gacgaaatca tggatgtgga aattccaaac ttcccaccac
    31621 ttgtattcga attggatgaa aatttgaaca ttgtgaaaga gtactacttg gaagcataat
    31681 tcatttaagg cctgagttcg ctcaggcttt tttagttttg aatatcggat ttttcataga
    31741 gagtatggta tactggtggt attaaatggt aggaggaatt tattatggta agtaaaaaaa
    31801 tgttgcacgc ttgtttgcgt gttgagaact tagaagcatc tcaaaaattt tatgaagaag
    31861 catttggatt taaggaaacc cgtcgcaagg actatccaga gcacaagttt accttggttt
    31921 acttagcact tgaaggagat gactttgaga ttgaattgac ctacaattat gatcatggtc
    31981 cctatatcgt aggcgacggt ttctcgcatc tagctctttc ttcagatgat ttagaagggg
    32041 acaatgcgaa acataaggag ctgggctatc caacgacaga catcaagggc ttgccaggaa
    32101 gtccaggtcg ttattatttt gtgacagatc cagatggcta ccgtgtggaa gtcattcgtg
    32161 cagattaatt tagaaaagat tgcctaggca gtctttttct tttcaaaaaa aatcagaaaa
    32221 tggcagaagg gagggattag gaagcaaatc aattatttat actcaatgaa aatcaaaagt
    32281 agtctaggaa acgaagccga agatggaact ggagttcatc aaggaaagtt gacaacggat
    32341 aattttgatt ttcgaagagt attacctaat ctttttatga gtttttatag aactgtcttg
    32401 acaagagcct ttaaatgatt tagcatagtt tatatatgtt ttgaatggga ggttggagat
    32461 gaaaaaagtt agtttttggt tgggaatcaa catcgccttg ctcggcataa tggtaagttt
    32521 ggctgtatgg ttatttgcag gacttcaaga aagacaggtt agtcagttta tcgaggaaaa
    32581 acaacaaacc atcctcgcta aaggcaaggg caaaattcaa gagggaaata ttgatacgac
    32641 ccatgttgtg gctgccttac ctacagatga tgcaggtcat gtcttaggac ctgtagaaag
    32701 tcgaatgatt tcctatgttc aaagacgctt tggtcataaa aaaccagcag gaaaaattca
    32761 aaaactggtc tttatttcat caatagaggg aaaaacaaat tttaaaaatg taacagctcg
    32821 tgaaattcaa gcggagcact ataaagtaga caacttgcaa attaaaaagc aggataaact
    32881 cccgtctgag cgtgtgttgt tgacgcagga caatgaattg tttaccctgg aagatttatt
    32941 acctaattta tcctctgcag caagtattat tgttggtcat ctaagagaag ccctacttgc
    33001 tcaaggaatg aaagagactg atgtagaagc gattgtcaaa aaatttgaaa cactagactt
    33061 aaatgctatt tcctttagtt atggagacag ccaattaacc ttacaattac cagatggtta
    33121 cggcatcaac cagttggttc taccaatttc agatttgtac ccagtagtga agagtgatta
    33181 tctagtagat gctgataagg ttggctatga tgagtatatg gctgcacaag ttgtggataa
    33241 gaaacatttg agacaggtcg ctctaacctt tgatgatgga ccaaatccga acacgacacc
    33301 ggtagtttta gatttactga aaaaatataa tgccaaagca actttctttg ttgttggtaa
    33361 ggctgtagct gggaatgaag ctattctccg tagaatggta gcagacgggc acgtcatcgc
    33421 caaccatacg tggaatcatc ccaatctagt cactatttct ggggagcaag tacagagaga
    33481 aattcaagat acacaggcag ctattactga agctacaggt attgtaccaa caatggttcg
    33541 tcctccttat ggttctgtta accaggctgt tgtcaatcag atgggacttc catcgattta
    33601 ttggtcggtc gattctaaag attggaagag tcgcaatccc caagccattt tgaaagaaat
    33661 aaaagaacag acttgtccag gaagtattat cctaatgcat gatattcatc agtcaacagt
    33721 tgatagcctc gagtctgtat tgcaatattt aacaggcgag ggctacaata tggttactgt
    33781 aacagactta ctcgccagtc ctctcaatcc tcaattaatc tattattcac aagaattatc
    33841 tggtccagcc cagtaagaat gataaaaggc ttagaatcat gttagtagaa acactggttc
    33901 taagcctttt gtatattgtt cattatattt tgtagagctc ttgattcttg agaatgactt
    33961 cttggacgga ggcatacttt ttcaattgtt ttagttcgct aggactagag actagggtga
    34021 tgacaagacc ttccttgccc atgcgtccag tacgtccaga acgatgagtg taggcttctt
    34081 ggtcaaaagg aacttcaaag ttgaggacac attctaagtt atcaatatcg ataccgcgtg
    34141 cgaccatatc tgtagcaagt agaagattga gttcgtgatt cttgaaacgt tcgatgatga
    34201 ccttgcggaa ttttacgttg acatcagaag ccaatgaaac tgcattcaca ccattataga
    34261 gtagtttatc ttcgcttgca ccaaggtctg ataggctgtt aaaaaatgca agagcacgaa
    34321 aatcagggat attggcaaac ttacgtagag tttccaaacg gtcacgctta tctaccatca
    34381 tatagcaatg ctggatatta tccaatttct gctcagataa atcaatgctt tcaatgtctt
    34441 cagcaatttt ttgacggtca aatttagctg ttgcactcat gtagattaac tggtggtcac
    34501 gaggtacata gttgataatc ttttcaacaa actgatattg agaatcggag aatagctgat
    34561 caaactcatc taggacgatg gtgttgatat tcatcatctt gatttttttc aatttaatca
    34621 actcgaaaat acgaccaggt gttccaatca ggatttctgg tccttttttt agtcgctcaa
    34681 tctggcgttt ttgactggaa ccagacaaga ataattgagc agtcaaccca attgtttccg
    34741 accaagcctt acaaacatca aatatttgac cagccagctc tgtatttggt gcgaggatga
    34801 gcaattgttg ggctttttta ggagttaggg ctaataggct aggccagagg taggcaaggg
    34861 tttttcctgt gcctgttggg ctgatagcta gaagggactt gccgtttgca ataggctcga
    34921 aggcctggac ttggatagga gtaaagtcct caaagccaag tagggtaagc tggtccgtcc
    34981 agctgaaggg aaatttagat ttcattgtta tccgccttaa agattattcc tgcgtcttga
    35041 cgcatggtgt aaagtgtttg atggacgctt tctgccacag tcaaccactg gtccacaagc
    35101 ttgcggtttt gttgcttgat tgcctgtgca atttctagcg cttcttcgag catagggtgc
    35161 tgggccgctt ggattggtaa aacaatttgg ctaccgtcat gttttgtgaa aatagcagag
    35221 ctgatatact ggcatgcgtt gagtgttagt gtcccatcat ttgtatagat ttcgctcgct
    35281 agattggtcg taatattttt tcctgcttga atgtggacga tatagttgtc ataaatgagt
    35341 tgtcccgaac catttaagtc aatactagaa ggtagctgtt gtgctacata gcgggccgtt
    35401 ctgggagttc ccaaaatgcc gatagcggcg tagagcgtat agacacctaa atccatgaga
    35461 gcaccaccgg aaaaatcagt tgaaaagata tttggcattt gcccagctaa caattcaggc
    35521 atcttagaag aatatttggc atacccaaat gaaccaccta aaatcgtttt atccgtcaaa
    35581 aattcacgga taatggcttg agcttgttcg tgatagtttc gagcagcctc aaagaggaaa
    35641 acattatttt cttgggcaac gcgacgcaat tgttctaatt cctgaggtgt agaaaccatg
    35701 ggtttctcaa caatagcatg tttaccagca gctagaacag cttttgcctg ttcaaagtgc
    35761 agggcatttg gactggcaat atagacaaca tcaatgggag cagaaagaaa ttttacccat
    35821 tctgtgtata aatcgactcc ttcatactgc tctgaaaagg cagcagcagt ttcttgttta
    35881 cgggagaaaa cagcctgtag ctgataatgt ccacttaaat gggccgcctc tataaaacga
    35941 tgagagatgt ctgaggtgcc aacaatacca aaattaagca taaattctca tttcttttgt
    36001 gttatccttt tcattatacc atgtttcatg gtaaaatagt attgaaaata gaaggagatg
    36061 atgatgactc agaaacccat tattattggc gtaaccggcg gatctggggg tggcaagaca
    36121 agtgtgtcac gtgccattct ggataatttc ccaaatgctc gtatatctat gattgaacac
    36181 gattcttatt ataagaatca gtcccacctg acctttgaag aacggatact aaccaattat
    36241 gaccatccac tggcttttga tacggatttg atgatttatc atatcagtga gctgttagca
    36301 ggacgttcag tggatattcc gatttatgat tacactcagc acacacgttc agagaagacc
    36361 tatcgtcagg aaccacaaga tgtatttatt gtggaaggta ttttagtatt ggaagacaaa
    36421 cggttgcggg atttaatgga tattaagata ttcgtcgata ctgatgacga tattcgtatc
    36481 attcgccgca ttaagagaga catggaagag cgtggccgta gcttagatag tatcattgag
    36541 cagtacacct cggtggtgaa accaatgtat caccagttta tcgagccaac caagcgctat
    36601 gcagatatcg tcattcctga aggcgtcagc aacgttgtag ccatcgactt gattaacacc
    36661 aaggtggaga gtatattaag agagcgtggt taagatgccg aagcaaagaa tattacctca
    36721 tatcatatta gggattatgg gtgctagcgg tcaaatggta actggcaagc agattaccga
    36781 ctatgttcaa cgtgatttag gcgaattttg gcaggttgcc catagccaag tctatccaga
    36841 attaaaacgt atgaccaagg aagaattgat tacttgtcat gcagtacctg gaaatgaaaa
    36901 ggaaaagcag tatgcgatga cggctactgg tcgtcagatt ttagacgaat ggctatccat
    36961 tccaaatgaa gaaacgcctc agcaaagaga cttgttttca atcaagatgt tttttatccg
    37021 tgaaaaggat gacccacgga ttcctggttt gttgcagagt caaattgaac tagtcaccaa
    37081 gcacttaaaa cacctagaaa gtcgtaaagt tgagctgttc tcaaccaagg aaagtatcca
    37141 agacaattat ggacactatt tgattttgac acgggctatt gaacgcaacc gtgcccagct
    37201 caaatggtta gaggatacac tggcagaaat gtaacgattc ggatttccga atcgtttttt
    37261 cttgtgtcct gttttggatt atgttagagt aagaagaaat gtgacttaat tggaggaatg
    37321 tatgtcaatc aaacagatgg ttagtatggc gctagtagtt tggaatttag ttgtcttcat
    37381 tacctatggt atggataaag ggaaggcaag aaagaacgcc tatcggattt cagaaaagac
    37441 cttattactc atgtcctatt ttggtggcgg gttgggggcc tgggcaggtg gaacccattt
    37501 tcggcataag acacagaaaa agtattttca actagcctgg gctatagggg tattgattga
    37561 tgcagtgatt atgtactgga tgtggaaata ggcgcaagcc tttttcttta tcgctcggac
    37621 tataaaagtc ggcttaacta tgctataatg ttcctatgac aaaacaagaa aaaatttcaa
    37681 actatcaatt attattggct caattggaag ctcttcttga tggtgaaacc aatgctttag
    37741 ccaatctatc aaatgcttct gctttgctca atcaagctct accaaactct gtctttacag
    37801 gattttactt gtatgatggt agtgaattga ttttggggcc ttttcagggt ggcgtttcct
    37861 gtgttcatat tgcacttgga aagggtgtct gcggtgaggc tgcagctaag cgacagacta
    37921 ttctcgtaga cgatgttcgt ctacatgata actatatttc ctgcgatgcg acagccctat
    37981 cagaaatcgt tgtgccaatg gtgaaaaacg accagttgct gggcgttttg gacttggatt
    38041 cgagattggt agctgattat gatacgattg accaagacta tctagaaaag ttcgttgctc
    38101 tcttggttga gaagacggac tggaattttg ctatgtttgg agaaaaacgc taatgtacca
    38161 agctttatat aggaagtacc gaagccagac ctttggggag atggtggggc aggaggtggt
    38221 tgcgaccacg ctcaaacagg ccattgaaca gggaaaaatc agtcatgcct atctcttttc
    38281 aggtcctcgt ggtacgggta agacatcggc agctaagatt tttgccaagg ccatgaactg
    38341 tcctaatcag attggaggcg agccttgtaa cgattgttat atctgtcagg ctattacgga
    38401 aggtagcctg gaagatgtga ttgagattga tgcggcttcc aacaatggtg tggatgaaat
    38461 ccgagacatt cgtgataaat cgacctatgc acctagtctt gcgacctata aggtctatat
    38521 catcgacgag gtccacatgc tgtctactgg cgccttcaat gccctcttga agaccttgga
    38581 agagccgact gaaaatgtgg tctttattct agcaacaacg gaattgcaca agattcctgc
    38641 tactattctg tcaagggtgc aacgatttga atttaagtcc atcaaggtga cggacattca
    38701 ggagcacttg gctgcaattt tgaccaagga agggctaatc tttgacgagc aggctctgac
    38761 gatcattgcg cgtcgggcag aaggggggat gcgggatgcc ctatctattt tggatcaggc
    38821 tctcagcctt agtcaggacc agcaagtgac cttggaaatt gctgaggaaa ttacgggttc
    38881 tatcagcttg cgtgccttgg atgactatgt ggcaagtctg cgtcaagggg atagtgtcac
    38941 agctctccag catctacaaa ccttgtttga ccaaggaaag agtatgagcc gttttgcgac
    39001 agatcttttg cactatttga gagatgtcct tatcgtgcag acgggtggtg aggatacgca
    39061 tttaacaaca ggtttttcag aaaatctagc tcttgagcag gcacggattt ttaccatgat
    39121 tgagatggtg accaggggtt tggcggacat caagtccagt cctcaaccga agatttacgc
    39181 tgaaatgatg accattcgtt tggctgaaga tagttctcct tcgggggcaa tggcagagct
    39241 gccagctgat ttactgggcc aactagccag tctgcaacaa caagttgcgg atttacagaa
    39301 acaactaggt caattatcta gtcagccaag tgctgttaag ccagtttcac gcaagccaca
    39361 ggctccgaag aagtaccgat tggataccag caaggttcat gctattttgc aggaagctat
    39421 ggaaaatcca accttggcgc gtgaaaattt gactcgcttg cagaatgctt ggggagaaat
    39481 tattgagagt ctgtcaggag cagatcgagc cttgttggtt ggttctcaac cagttgctgc
    39541 caatgaaaat catgcgattc tagcctttga ttctccgctt aatgctgagc agacgatgaa
    39601 gcgtgacaat ctcaatacca tgtttggaaa tattctcagc aaggccgcag gtttttcgcc
    39661 acagatttta gctattgctc aggaagattg ggtaagtatt cgtgctgaat tttcggcgaa
    39721 agcaaaaggg caaaagacac aggaaatcga aaaagaagcc agtccagtcc cagaagaatt
    39781 tggctttctc gcagatacag ttgagattag aaatgattag aaaatatcag tcctaagact
    39841 gatgaatagt tttgatagat attttatact atattcaatc ctaaatattt ttcatatctc
    39901 cttaagaaag caccaattag attggtgttt tcttgtttag aaaagaatcg aaacctatca
    39961 agaaagcata taaaaattca gccagttgac tgaatttttg gtataatcta tttta
//
LOCUS       DBNFCX010000007        39855 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.007, whole genome shotgun sequence.
ACCESSION   DBNFCX010000007 DBNFCX010000000
VERSION     DBNFCX010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 39855)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39855)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39855
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.007"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            185..649
                     /locus_tag="AC1PJC_000255"
     CDS             185..649
                     /locus_tag="AC1PJC_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014608780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIP6619303.1"
                     /translation="MKIAIENLNRVKTIKQFTHKKLSEKTGYSRNSIQKLFSYHKNSK
                     TRLDLVVTVCKALDIDFPSIFDRKTENYYGHFMFNDDSVNALGTEYYLRNFVNRVQLE
                     IKNSPRYSLKITTGLSESTISDLLNFKTRNPRVETLLKIAEGLNISISEMFR"
     gene            658..1878
                     /locus_tag="AC1PJC_000256"
     CDS             658..1878
                     /locus_tag="AC1PJC_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014727739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MvaI/BcnI family restriction endonuclease"
                     /protein_id="HIP6619304.1"
                     /translation="MLFEPYQDELQFIEQIHKYNEREYTVIRLTDTMLSKSIIDANVF
                     VQDVLKKYGLMDYQSLKNGEKKKLDVMLYIGEEKFETKMSCYRANARGDERFWIYGRQ
                     FKESFHSGDLMYISVDSSSSRVININISRGILSDEDLAKIFGHDKIKEAFSRLIPKVK
                     EIASKGYHPNSKGTGKIAPKDAGDTLENLLGIETNNSQKADFEDLIELKSKTSKTLDT
                     LFTLRPKFEGTPVAEFESNDRSRVSAFARLYGYESDKHPGMNSLYITIGSEMSPQNNQ
                     GFYLDVNESDRTVEIRRQENKTSQRVAYWHFEDLEKELHLKHPATLWVKAESRMNGDI
                     AEFKYTEAELTRSPQFMTFISLIKLGVVTYDWRGYTSKEGKYEGKNHGNAWRVKNKHR
                     NQLFGSSEMINLLK"
     gene            1901..2767
                     /locus_tag="AC1PJC_000257"
     CDS             1901..2767
                     /locus_tag="AC1PJC_000257"
                     /inference="COORDINATES: protein motif:HMM:NF022440.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2806 domain-containing protein"
                     /protein_id="HIP6619305.1"
                     /translation="MGKNLGELIATVSENKETINAIISLISGSILGTVLTNKKKQSEE
                     LSQQKVSIFNKKIQELLDNGELTYVEFYKAKNYGIIAEKADQIQREKQFQFIPHEFEF
                     DWYYRFYEEAGMVSNEKLQEYWSNILVKQVSSGGISLRTLSVLSKMTASEAKLFERIV
                     TKTILLPMYGEYILPSDTKFLETVGITADEIRELIDMGLISATQNLQRILPLKLEIQD
                     EEQSSYDIPISIPSFAFTNAGVDLLNTLEIEKDEQAFSAFVELFNEKWIEEQRELYLS
                     EGTEFLEKESEE"
     gene            complement(3151..3513)
                     /locus_tag="AC1PJC_000258"
     CDS             complement(3151..3513)
                     /locus_tag="AC1PJC_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000819423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619306.1"
                     /translation="MKRFITLLIVSLSTILLISCSNQSSNSLDGEYYWINESRNEVAF
                     TISGNKGTINKGEADTFTIDKDSSTIELSGSNIINRKENYTFKDGVFTVDISGTKQDY
                     YKKDSEAYNEAVKKYGNK"
     gene            3724..4104
                     /locus_tag="AC1PJC_000259"
     CDS             3724..4104
                     /locus_tag="AC1PJC_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014608776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2513 domain-containing protein"
                     /protein_id="HIP6619307.1"
                     /translation="MKRDMDLCRLILFKIEDEYRSTALINLQIDGYDIETIAYHCDLL
                     FEAGLIKSYKPTYASDEIYFFSVGALTWEGHDFLDKIRENTMWNRTKNSIKENALPMT
                     LEVIKSVATSFINDRLSKYLDGSL"
     gene            complement(4336..4653)
                     /locus_tag="AC1PJC_000260"
                     /pseudo
     CDS             complement(4336..4653)
                     /locus_tag="AC1PJC_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647375.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
     gene            complement(4660..4764)
                     /locus_tag="AC1PJC_000261"
                     /pseudo
     CDS             complement(4660..4764)
                     /locus_tag="AC1PJC_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013851445.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
     gene            4796..5449
                     /locus_tag="AC1PJC_000262"
     CDS             4796..5449
                     /locus_tag="AC1PJC_000262"
                     /inference="COORDINATES: protein motif:HMM:NF023227.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619308.1"
                     /translation="MRANWSYQDVESKVWQIPKLTDFWGIGHRTEKRLHQLGIYSVKE
                     LALANPDYLKKEFAVMGIQLWLHAHGVDESSLKNPYRTKSKGIGNSQTVDRDDTDKQE
                     LEILLRGFTSQVAQRLRKKGKKTKRVGLTLMFSSREKRMPLLVQRTIESTSDYKRLAA
                     IIIDLFREKYKDGAIRRVGIRFNQLVDESVMEIGLFDDVEELEKNEWLQKAIDSIQN"
     gene            5478..5675
                     /locus_tag="AC1PJC_000263"
     CDS             5478..5675
                     /locus_tag="AC1PJC_000263"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619309.1"
                     /translation="MSWILHQGSLNAVDWWGTFRRWIGGIEMIDCSYLPYDSVRFYQD
                     RGMAKWMGFFISEHSTVLQES"
     gene            5930..6157
                     /locus_tag="AC1PJC_000264"
                     /pseudo
     CDS             5930..6157
                     /locus_tag="AC1PJC_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018165057.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5960 family protein"
     gene            6316..6765
                     /locus_tag="AC1PJC_000265"
     CDS             6316..6765
                     /locus_tag="AC1PJC_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HIP6619310.1"
                     /translation="MEVKDVMEILEGMKLGIFSTVDAVGTPHARPIHIAAANEDGVFF
                     MTSSETHFYQQLMGDERVALTALSEEDYLIQVIRIEGRARPASQELLEKVFADNPYVQ
                     HVYKDEESRKTMQIFQVYAGDGFYHSLTQGHKYVFKINGGESQVRTI"
     gene            7033..7752
                     /locus_tag="AC1PJC_000266"
     CDS             7033..7752
                     /locus_tag="AC1PJC_000266"
                     /inference="COORDINATES: protein motif:HMM:NF016145.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide pyruvyl transferase family
                     protein"
                     /protein_id="HIP6619311.1"
                     /translation="MFIDEPVQQQFSTEENRAFFTKYGPVGARSRATKDFFDRIGVDS
                     YWSGCLTLTIQPEKDIAKRDIVLAIDLPNAVYDKLVKESNYPVIRMSADINHQYMSPI
                     QRMKIAQYYLYQFARFVVTTRLHGTLPCLALGTPVLNIQEKGFEEGRFAGLRELAHHV
                     TVEEFLSGIYDINNPLPNPQRHLEIRKNLEERCQAFTGFSSSKGFLNGQPLLEFLADP
                     DLIQSVVTGLWSAHQQYGIYR"
     gene            complement(8021..8933)
                     /locus_tag="AC1PJC_000267"
                     /pseudo
     CDS             complement(8021..8933)
                     /locus_tag="AC1PJC_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_027973170.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS982 family transposase"
     gene            9481..10365
                     /locus_tag="AC1PJC_000268"
     CDS             9481..10365
                     /locus_tag="AC1PJC_000268"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014714000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HIP6619312.1"
                     /translation="MKLEKISVIVPVYNGEKHLRQCVESIMAQEYENLEILLINDGSK
                     DGSALLCEQLKYQDSRVKVIHKRQNEGLGAARNTSLDVATGEYIVFVDADDWIDPNHV
                     SDLYDLMKRTGSDVAISNFTQYNEDTGRYNIHILPEDYYEAVYTPEEWFNYQYGVGHN
                     ISLCFTVPWSKMYKKSLFEYILYPTDGFGEDDRTTWKTYLAADKIAYMHRSSLIYRIN
                     EGSMTQTADQATIFSTVPVAERLEVLGLLGFDLSKEIAAFKWRSQINRDSKLRQGDVV
                     AYKNLEFRKRMIEKYGKH"
     gene            10365..11366
                     /locus_tag="AC1PJC_000269"
     CDS             10365..11366
                     /locus_tag="AC1PJC_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003100874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HIP6619313.1"
                     /translation="MRVYITNLNGHASSSTAQICQNMVTDVATTLGYRELAIHAYRMD
                     ADTPEELSKRLDGVIAGLRHGDVVIFQTPTWNTTAFDEKLMAKLRAYQIKIVIFIHDV
                     VPLMFAGNYYLMDRTIAYYNQADVIVAPSQQMIDNLKRHGLTVAKTIVQGMWDHPTSV
                     PQLPASFKKEIHFPGSPERFSFVKYWNYDVQLNLYARQEVELPDQVKHFSYRPDEQLL
                     LEMSEGGFGLVWMDNHDKEYQTLYCPYKLGAFVAAGIPVIIQRGIANQEIVENNGLGM
                     IVDSLAEAVDRINSMSVEDYQNMVVKVRSFSPLVRQGFFTRKLLTEAVFKAKCEENL"
     gene            11363..13108
                     /locus_tag="AC1PJC_000270"
     CDS             11363..13108
                     /locus_tag="AC1PJC_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003100875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SP_1767 family glycosyltransferase"
                     /protein_id="HIP6619314.1"
                     /translation="MRKLEEIRVLPILESLAYIHKNDSSVVRFGDGEIDLILGHSIPY
                     QAYDKELAQDLKAILQMPSDEQLLVCLPDVFQNLERYNSNARYFWNKHFEKYREFYEE
                     ECQSDWYGSTFLSRPYIDLVDKSQSEHYFAAIKGLWEKRDILIVEGETSRSGMGNDLF
                     DGATSVSRIICPSKNAYSSYDQILSAILAHVENRLVILMLGPTAKLLSYDLMMRGYQA
                     IDLGHIDSEYEWYKMKATTKVKLGHKHTAEFNYDENIDEEVDATYLNQVLEWVSVPAK
                     AQKSKEEKEMKSDLISVIVPVYNVKPYLTRCLDSLLKQTHTNFELLLVNDGSSDGSAF
                     VLEDYAKKDQRIRIIHQENSGVSAARNRAIDEARGEYITFIDSDDFVEDFYLEHLYKA
                     AVSTGSDIAATNFSSFNEERQSFLFYHTKESYFQKVYTVQEWMDLEGNMKNNMHLAFT
                     FSPLKLFKRELFGDIRYPVGRLREDDATMYKLYLKANQIHFTNEGPYYYSQRAEGLSR
                     TVMLNDIATMISNAEERISLMVALGYNPAAQVKSYVERLKKCRGDALYAGQINLYRTI
                     CAKIDLFENYQKREN"
     gene            13109..13987
                     /locus_tag="AC1PJC_000271"
                     /pseudo
     CDS             13109..13987
                     /locus_tag="AC1PJC_000271"
                     /inference="COORDINATES: protein motif:HMM:NF012745.6"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
     gene            14120..15379
                     /gene="secY2"
                     /locus_tag="AC1PJC_000272"
     CDS             14120..15379
                     /gene="secY2"
                     /locus_tag="AC1PJC_000272"
                     /inference="COORDINATES: protein motif:HMM:TIGR02920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein translocase subunit
                     SecY2"
                     /protein_id="HIP6619315.1"
                     /translation="MFKQLVKRIRGSLIIKRVLWSIGVVCIYMLGKYIPIGTVPLYRN
                     VSATGFDLTDALDTLAMVSGGNFSMQNLFSLGISPWMTSMILWRFFSLFEIVKAATKR
                     QTHLYQMTLMFIVALIQAYGFSSVSDYYDIVELGPASQTLLRLASMVIMIAGSFVLSW
                     LANLNARKGVGGPSVIIISNMTLNFLLNIVALISQNSFNPLEWMLITLAIVLGSSLLI
                     WITLVVYRAEYRIPIRRIMIVSSFAERTYIPIRLTPAGGMPFMYAMTLMTLPPIVISI
                     LLGFFPDNQWIQFLSANFSISQLPGILFYIFLLFILAIGFSYFNLDPGEIAEGMQKGG
                     DFIEGVRPGLATKKYINKYLWRITIIGAIYTAVIGGLPMLIVWSQSGQMSFALLINNI
                     YIMTTLMLGIVEQINVMLTWKQYNDLI"
     gene            15390..16961
                     /gene="asp1"
                     /locus_tag="AC1PJC_000273"
     CDS             15390..16961
                     /gene="asp1"
                     /locus_tag="AC1PJC_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003100882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein Asp1"
                     /protein_id="HIP6619316.1"
                     /translation="MYYFIPSWYSGEHKWAVETPYWFRVFENMSFDDTVNQLKMFQNL
                     KEESAILLLSYQPQLRYFVHKQGLLNSPYWSFFDDIQNIRREETSFIDFKEFEWPQGV
                     RFVYTPFKVVVMEGEVCIADVHFAENGNLLQIHFLDGEKETKRLQFDDRGFLSSIRYY
                     KDGIATYQDYLNEFGVWQVRELLTSKEHKLEVNPQSDKGFRKAVYQDWEELFAERLEV
                     LKTEVLSEQDTLVVASDIRHNDLVLDQFKAYKKIFSFFGDRFDLTNTPALARVMAESD
                     LIVIDSEALELALQQEVAKHSLVVRNMTRVTPFDTRLRLGQSQTIKELIIYFLIDGLS
                     KELVDQAIAILLDVMEENPAIELHLLTYERNHSMEQLSEQLLEKIRKGYSLERFVSVE
                     SKDGENQLEEDESLELSAIKFLALNNENQIIEELDLTRLVIDLSPNPHLYTQIASISA
                     GIPQINRVPSEYVSHMENGWIIRNMEELSTAVGYYFDGLSNWNRSLVYTVQKMGDYTS
                     GKIIAKWKELLEDRT"
     gene            16958..18535
                     /gene="asp2"
                     /locus_tag="AC1PJC_000274"
     CDS             16958..18535
                     /gene="asp2"
                     /locus_tag="AC1PJC_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003100884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein Asp2"
                     /protein_id="HIP6619317.1"
                     /translation="MKIVQIGEEDWSVGIDLPESLEWFWVTEDKIQEFLDNQRAEEIA
                     KLQIEESDEEKIPPKIRLRYNAIMLTSSIREEVLSPLSSTIEAYSLFKQKDVSVDKQS
                     DTGISRQKVLRDLPFQGSKQETIEYLYRNLFSGQYGAKLKIPEIDVNPNFTGRVQYDG
                     NVGVIFDGQFGQDYETLFSFRYNLSSFPMSLELWSEFIKESGDTSIRMEIIALRKGSL
                     GEIYEIVYLDETQLLEPYVLQANEEVGFYSISFAVKGRGRLKFGVTHWRYSREGLGKF
                     ILGGKGYSDCKRQEIFSYFNPGDMKPPLNVYFSGFRQAEGFEGFFMMKSMGAPFVLIA
                     DPRLEGGCFYSGTDELENNVKRAIQDALDYLGFTREQLILSGLSMGAFGALYYSAYFR
                     QHALVVGKPFTNLGDSVMNLKLKRPDEFETSGDMIRNVVGGSDQTAIDQFNQYFWDKF
                     APVSFDRTQFAIAYMEQDDYDGHALERLVEHLADSDTHIFAKGYEGRHNDNSRAINRW
                     FIAQYHQFLKNDFGREL"
     gene            18535..19092
                     /gene="asp3"
                     /locus_tag="AC1PJC_000275"
     CDS             18535..19092
                     /gene="asp3"
                     /locus_tag="AC1PJC_000275"
                     /inference="COORDINATES: protein motif:HMM:TIGR03711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein Asp3"
                     /protein_id="HIP6619318.1"
                     /translation="MSEYFVQKIYWGDTANGGDYLYGSEIQHFDNGVRFSNQRFASGK
                     PIKKWESRTNYQGNRRSPVLPLLRPGASYRLKQRFRVEPAGRAYIQLRFLNRRGDEVG
                     LIILKNGEEEFTCPIDSFTYTITLCSAGCHSVDFFYLSLYSMEKPRAIHLSDEPRGFY
                     ANERYPKDIAFVKNLVQKLKKEAVG"
     gene            19089..21479
                     /gene="secA2"
                     /locus_tag="AC1PJC_000276"
     CDS             19089..21479
                     /gene="secA2"
                     /locus_tag="AC1PJC_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system translocase SecA2"
                     /protein_id="HIP6619319.1"
                     /translation="MKVKANSSFLNQVRLFKIKRIAKKILQLETQYHELSDEELANQT
                     VYFKERLEQGETLDDLLIEAFATVREASFRVLGQLPYEVQVMGGIALHQGCIAEMRTG
                     EGKTLTATMPLYLNALTGKGAILVTTNDYLATRDGEEMGKIYQFLGLTVGLGAKEEDE
                     NTEDKKGRASVYEADITYTTSSILGFDYLSHNLASSPEGKILRDFNYVIVDEADAVLL
                     DSAQTPLIISGSPRVQSNLFDICNQFILTLKEGEEFFFDPDKKEVYLTDKGNDYAESY
                     FDIKDLYTSESWELNRHINLALRAHYLYRKNFDYVVQDDEVKLLDNRTGRVLEGTRLQ
                     SGIHQAIETKEKVKKTKESRAMGSVTYQSLFNMFPKIAGMTGTGHQAEDELIETYHVP
                     VISIPTNKPIQRIDYPDKIYTTLPEKLYATIEMVKELHEKGQPVLLISGTVEITQIYS
                     KMLLQEGIPHSTLTANNVAKEALIIQEAGQYGTVTCATIMAGRGTDIKLGKGVAELGG
                     LAVIGTERMPNSRMDWQLRGRAGRQGEPGMSQFFVSLEDELLVRNGPDWVKKYFKKNN
                     HENRNNYGQPLKSGRFNRALTHAQTKSEDGAISSRRFTIEYDESMRIQRNKVYALRDR
                     LMTEQENLAEKVSAIVKAVIEDYLQEYPNRTSSQVRRYILDNYTYSLKTMPDGFSAKK
                     DKHVKKLIYSLFEKEMAKKTSIVQTHEGMSEFYRLAVLKAIDEAWIEEVDTLQQLKGV
                     ITTRSTAQKGSVSEYYKESLRSYKEMTRQIQQKIVRNIMLSTIEVDKEGRFSIYFV"
     gene            21499..22998
                     /gene="gtfA"
                     /locus_tag="AC1PJC_000277"
     CDS             21499..22998
                     /gene="gtfA"
                     /locus_tag="AC1PJC_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000262051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system glycosyltransferase GtfA"
                     /protein_id="HIP6619320.1"
                     /translation="MTIYNINRGIGWASSGVEYAQAYRASILRNIHQDSKFIFTDMFQ
                     GENLAHYTANIGFQDEEVVWLYGFFTDVKTRSTTYTIGQFESSLSSGMVKISQNNDSI
                     RYEDKEKGIVAIGFLRKNHPDYVQRVEYLSKGKLIRKDYFSYTKMFSEYYAPVDNQPK
                     LYQRTFFNEDGSVAYEENCDGEKSLFRFKDTILFSKEELIGYMLDCLQLTSQDIILVD
                     RATGTGQAILRHKGAAKVAVVIHAEHYNINSMTEDTILWNNYYEYQFTNADKIDAFIT
                     STQAQKDTLSAQFKKYTDKDPAIFVLPVGSLDKLCQSAEGRRPFSLLTCSRLAAEKHI
                     DWLVEGVVLAQKQLPDLTFDIYGAGGQQSKLASMIEQHQAQSYIHLKGHHDLTDIYQQ
                     YQVYLTASTSEGFGLTLMEAIGSGLPIIGLDVPYGNQTFVENEKNGSLIPRQDPDDAI
                     IYAQEFAKRLIQLYQSNQLDAWHQASYKRAEEFLTSRLEEAWQTFIEEV"
     gene            23002..24315
                     /gene="gtfB"
                     /locus_tag="AC1PJC_000278"
     CDS             23002..24315
                     /gene="gtfB"
                     /locus_tag="AC1PJC_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000584700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0031647 - regulation of protein stability
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system glycosylation chaperone
                     GtfB"
                     /protein_id="HIP6619321.1"
                     /translation="MILLFDYFHTASQDLYYSLKQAGLTGSTVAINDDGFLPEGVTSV
                     YSYYCQMEAGHGKPLYFNQIKVPPFWEITGTNGEGEIWEYSEKRAKIFYAEPKHLRHV
                     KNVDWMDKNEKVRFTDHYNQYGWLYARTYFTAEQKATTRSYFTREGLEVIVENFMTGD
                     VILNWQGKTHFFENRVAFLKHYFKEMGWDTSQIWYNSLSTPFFLSYNMPQPGQDILFW
                     QETIGEDIPGNMKILLASATQRTQTVVVQDKATFDKMRTLLPTEQAEKLVYLGYIYPQ
                     RRENQNRQDIFIFTNSDQIEQLDYLTTALPNFKFHIAALTEMSQRLMAFDTKDNVQLY
                     PNISQRALERLYDTCDIYLDINHGSQVMEVVRKAFEQNMVIFAFENTVHNASLIIKDH
                     IVPQAEPHKLVELLNANAGRLTDKVVEQRTHTSNEFVENYVAILG"
     gene            24328..24492
                     /locus_tag="AC1PJC_000279"
     CDS             24328..24492
                     /locus_tag="AC1PJC_000279"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619322.1"
                     /translation="MTKKNQLLEDEITQQIQEARYVEPKPDKKRRGLFYKTIIFLVTL
                     AILYSLLRRF"
     gene            24618..24959
                     /locus_tag="AC1PJC_000280"
     CDS             24618..24959
                     /locus_tag="AC1PJC_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003080443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sulfur cluster assembly factor"
                     /protein_id="HIP6619323.1"
                     /translation="MREDIQINERALTVSEQLVEVLESIYDPEIELDIYNLGLIYEIH
                     LDEAGFCKVVMTFTDSGCSCADTMPGELVAALKTIDGINDAQVEIVWSPAWKMTRISR
                     LGRITLGISPK"
     gene            complement(25142..25534)
                     /locus_tag="AC1PJC_000281"
     CDS             complement(25142..25534)
                     /locus_tag="AC1PJC_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6176 family protein"
                     /protein_id="HIP6619324.1"
                     /translation="MKLHVELSRFRVKEGKSAVVDQWMTFLNEHMEDTLLTLEGEKMY
                     VETIFREVLDGREYLYWYSVQAEGGIEVEDSESYIDKKHLEYWEECIDPSYGMVDLDP
                     QVIMIPKPVYETMEELDRQYDETYSHLN"
     gene            complement(25550..26803)
                     /locus_tag="AC1PJC_000282"
     CDS             complement(25550..26803)
                     /locus_tag="AC1PJC_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HIP6619325.1"
                     /translation="MVEHYGTSELNTLTPLQAIVLAGDYSYIRQIETTLKSLLYHNCH
                     LKIYIFNQDIPKEWFSHYQCLLQQIGSELIDVKLLDIGFNNSWTVHSNLHHINHMTFA
                     RYYIPQFVKEDKVLYLDSDLVVTSDLTEFFEKDIQNYYLAASRAAFGYGIGFNAGVML
                     INNKRWKQENIQKQLIDLTNRDFKNVPEGDQTILNRLLGQRYLRLDDTYNFQIGYDRG
                     AFHYGHRHLFQDKLDPLPLILHYVSADKPWNTYSSGRLREIWWKYHLLEWSEILEKWR
                     VLYTPTQKKSFRGQLLVITNTHLLQNVTYLIDHLPDYQFHIAAFTDMAENLKQLSSKE
                     NVFLHPRVIGYILEDMIKNCDIYLDINHGTKLNELLEHVITNQKPVLSFDNIASPIFE
                     DYSHRQTFSHHQPESLITAIRLLSK"
     gene            complement(26826..28538)
                     /gene="ilvD"
                     /locus_tag="AC1PJC_000283"
     CDS             complement(26826..28538)
                     /gene="ilvD"
                     /locus_tag="AC1PJC_000283"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HIP6619326.1"
                     /translation="MTDTNKLKDFRHRSSVYDSMVKSPNRAMLRATGMTDDSFEKPIV
                     GVISTWAENTPCNIHLHDFGKLAKEGVKDAGAWPVQYGTITVADGIAMGTPGMRFSLT
                     SRDIIADSIEAAMGGHNVDAFVAIGGCDKNMPGSMIAIANMDIPAVFAYGGTIAPGNL
                     NGKDIDLVSVFEGIGKWNNGDLTAEEVRQIECNACPGPGGCGGMYTANTMATAIEVMG
                     MSIPGSSSHPAESSEKKADIEEAGRAVVRMLELGIKPSDIMTREAFEDAITVTMALGG
                     STNATLHLLAIAHAANVDLTLEDFNDFQERVPHLADLKPSGKYVFQDLYNVGGVPAVM
                     KYLLKNGFLHGDRITCTGKTVAENLENFADLTPGQDVIMPLENPKRADGPLIILKGNL
                     APEGAVAKVSGVKVRNHTGPAKVFDSEEEAIEAVLTDEIVDGDVVVVRYVGPKGGPGM
                     PEMLSLSSMIVGKGQGDKVALLTDGRFSGGTYGLVVGHIAPEAQDGGPIAYLRTGDLV
                     TVDQDTKEITMHVSDQEIEERKKTTVIPPLYSRGVLGKYAHTVSSASKGAVTDFWNRE
                     RSGK"
     gene            complement(28699..29115)
                     /locus_tag="AC1PJC_000284"
     CDS             complement(28699..29115)
                     /locus_tag="AC1PJC_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619327.1"
                     /translation="MTLSTSVTNSTTRVSRTFISYLAITAFLFIFSRIYESLSYGEVS
                     VFMHYMFCIPLIGGAVLLGLLQLIPTLSRLSYNLWNSGVATITAGCLLRGIINLSGRS
                     TTLDQPYWYIGAAFLVLSLVSLFINPSANNRRKTTT"
     gene            complement(29090..30028)
                     /locus_tag="AC1PJC_000285"
     CDS             complement(29090..30028)
                     /locus_tag="AC1PJC_000285"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002918105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiester glycosidase family protein"
                     /protein_id="HIP6619328.1"
                     /translation="MKLLKKPFAYASIFGMLLTGGFTYSMLKTFVISEAITTVSASNA
                     TSTSVQNTTTASSSTTATTATNVSTTDTSYSDDNIQINLETITTNNTTVYVADIQVSS
                     PEYLKTALAQNTYGTNVTAKTSETAAANNAILAVNGDYYGANSTGYVIKNGVLYRDTV
                     RDNAAYGDLAIYADGSFEVIYENEITAQELIDKGVVNLLAFGPSLVENGEIVVDTSTE
                     VGRAMSSNPRSAIGIIDENHYIIVVADGRTSESQGLSLYQLAEVMKQYGAQTAYNLDG
                     GGSSTLYFNGQVINNPTTNGNTISERAVSDIVYIGY"
     gene            complement(30015..31067)
                     /locus_tag="AC1PJC_000286"
     CDS             complement(30015..31067)
                     /locus_tag="AC1PJC_000286"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HIP6619329.1"
                     /translation="MYYVVIPAYQPDEKLIQLLEIMKNRLNCQVIVVDDGSTGAFKNI
                     LEIAKTYAIVLHHDVNKGKGQALRTAFSFIQDLRKPGVIVTADADGQHAVNDIDRIAR
                     AAMNLPSRLILGVRQFTKDIPFRNRFGNKLTRVLFRLQTGVSVSDTQTGLRGFHTDLI
                     PFMLDIEGDRYEYEMNMLTQASQRYKITEVPIQTIYIDDNASSHFRPIKDGLLIYKNL
                     FKFALASFGGFLVDYGVYALALLLLTSLPTAVRLLVANTIARICSATCNFTLNKKLVF
                     NNEESIARTGAGYFTLAFVLFLCDTALLYLFHQILELNLYIVKLAVGIFLFLASWFVQ
                     KNIIFKERKSFSHEIA"
     gene            31293..32996
                     /locus_tag="AC1PJC_000287"
     CDS             31293..32996
                     /locus_tag="AC1PJC_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HIP6619330.1"
                     /translation="MQEIQLDQPRSGSYLILDTLHQLGVDLVFGYPGGAVLPLYDAIY
                     QYEGIQHILARHEQGAVHEAEGYAKSSGKVGVAIVTSGPGATNAITGIADAMGDSVPL
                     LVFTGQVATRGIGKDAFQEADVLGMTMPITKYNYQIRDTADIPRVITEALHIATTGRP
                     GPVVIDVPKDIQERVVDFYHDPTLHLPSYQPTIEPNGLQVKKILKQLSQAQKPVILAG
                     GGVNYADANKELVAFAERYRIPVVSTLLGLGAMPIEHELSLAMGGMHGSYAANMAMDQ
                     ADYIINIGARFDDRLTGNPTTYAPNATVAHIDIDPAEIGKVVKTAIPVVGDAKATLKA
                     LLALETVETGYADWTAQVLENKRRAPFWYDEDEKVIKPQAAIELIGQLTQGDAIVVTD
                     VGQHQMWAAQFYPYKHARQLVTSGGMGTMGFGIPAAIGAKLANPDKEVIIFVGDGGFQ
                     MTNQELAILNGYGVPIKVVLINNHSLGMVRQWQESFYEKRRSQSVFDDEPNFQLLAEA
                     YGISHYSFDNPVTLSEDMKVILEDKPMLIEVHISNREHVQPMVPAGKSNAEMLGVKFN
                     A"
     gene            32989..33465
                     /gene="ilvN"
                     /locus_tag="AC1PJC_000288"
     CDS             32989..33465
                     /gene="ilvN"
                     /locus_tag="AC1PJC_000288"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002927678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990610 - acetolactate synthase regulator
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HIP6619331.1"
                     /translation="MRRMLTAKLRNSSGVLNRFTGVLSRRQINIESISVGPTEVDGIS
                     RVTVIVDVASHDEVEQIIKQLNRLIDVVRVRDLTDIPHLEREVILVKISAPPTKRAEI
                     LAIIQPFRANVVDVAPHSITIQMTGDGDKIDALLRVIQPYGIKNIARTGATGFSRD"
     gene            33597..34619
                     /gene="ilvC"
                     /locus_tag="AC1PJC_000289"
     CDS             33597..34619
                     /gene="ilvC"
                     /locus_tag="AC1PJC_000289"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006145054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HIP6619332.1"
                     /translation="MTVTMQYEKDVTVAALDGKRIAVIGYGSQGHAHAQNLRDTGHDV
                     IIGVRAGKSFDKAKEDGFETFEVAEAAKQADVIMILAPDEIQADLYNEEIAPNLEAGN
                     ALGFAHGFNVHFEFIKVPADVDVFMCAPKGPGHLVRRTFEEGFGVPALYAVYQDATGN
                     AKHIAMDWAKGVGSARVGLLETTFKEETEEDLFGEQAVLCGGLTALMQAGFEVLTEAG
                     YAPELAYFEVLHEMKLIVDLVYEGGFKKMRQSISNTAEFGDYVSGPRVITDQVKENMK
                     AVLADIQSGKFANDFVNDYKAGRPRMEAYRKEAENLEIEKVGAELRKAMPFVGRNDDD
                     AFKIYN"
     gene            34903..36153
                     /gene="ilvA"
                     /locus_tag="AC1PJC_000290"
     CDS             34903..36153
                     /gene="ilvA"
                     /locus_tag="AC1PJC_000290"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019322143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004794 - threonine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase IlvA"
                     /protein_id="HIP6619333.1"
                     /translation="MITAKNVEQAYSVLKRVVVRTPLDYSRYLSEKYGATIYLKRENE
                     QRVRSFKIRGAYYAISQLTDDEKSRGVVCASAGNHAQGVAYTCQEMQIPATIFMPITT
                     PQQKIGQVKFFGGDYVEIRLVGDTFDESAKAAQDYTQESGKTFIDPFDDENVQAGQGT
                     VAYEILEEAEEQTISFDQILVPIGGGGLVAGVSAYLKEHAPEIKIVGVEASGARSMKA
                     AFDKGRPVKLDQIDKFADGIAVQKVGKSTYEVARKYVDRLIGVDEGWISGTILDLYSK
                     LGIVAEPAGAATIAALEVVKDQIKGQTICCIISGGNNDINRMPEMEERALIYEGIKHY
                     FVVNFPQRPGALREFVNDILGTNDDITRFEYIKRANKGTGPVLIGIALGDKTDYTQFI
                     SRLEEFDPQYINLHENDSLYKMLV"
     gene            36163..37065
                     /locus_tag="AC1PJC_000291"
     CDS             36163..37065
                     /locus_tag="AC1PJC_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HIP6619334.1"
                     /translation="MVLGPIVFIGGFLFFVLIALILIASGLYVVKQQTVAIIERFGKY
                     QKTSTSGINFKIPFGVDVIAARIQLRMLQSEIVVETKTQDNVFVTMNVATQYRVNENN
                     VTDAYYKLMHPEAQIKSYIEDALRSSVPKLTLDELFEKKDEIALEVQKQVAEEMSTYG
                     YVIVKTLITKVEPDAEVKQSMNEINAAQRKRVAAQELAEADKIKIVTAAEAEAEKDRL
                     HGVGIAQQRKAIVDGLADSIRELKESNVSLSEEQIMSILLTNQYLDTLNNFAQGGNQT
                     IFLPGNPEGVEDIRTQILSSLRAK"
     gene            37151..37360
                     /locus_tag="AC1PJC_000292"
     CDS             37151..37360
                     /locus_tag="AC1PJC_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619335.1"
                     /translation="MTSYEKVAAVVGWVREKKITGYRISKETNAREMSVIALAQGRAK
                     IDNISFATALGLIDFYDKNHKKFEN"
     gene            complement(37485..38228)
                     /locus_tag="AC1PJC_000293"
     CDS             complement(37485..38228)
                     /locus_tag="AC1PJC_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015424 - ABC-type amino acid transporter
                     activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HIP6619336.1"
                     /translation="MTKNVILEIKNIKKSYGQNQVLKDISISVEKGEVISIIGSSGSG
                     KSTFLRSINLLETPTEGQILYHGQDVLAKGYDLTTYREKLGMVFQSFNLFNNLNVLEN
                     AIVAQTTVLKRDRAEAEKIAKENLNKVGMTEQYWQAKPSQLSGGQKQRVAIARALSVD
                     PEVILFDEPTSALDPEMVGEVLKTMQDLAKSGLTMLIVTHEMEFARDVSDRVIFMDKG
                     VIAEEGSPQQIFENPQEERTREFLQRFLG"
     gene            complement(38221..39786)
                     /locus_tag="AC1PJC_000294"
     CDS             complement(38221..39786)
                     /locus_tag="AC1PJC_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding
                     protein/permease"
                     /protein_id="HIP6619337.1"
                     /translation="MKRKLSIFLLTLIAVFSVTTGVRADEYLRVGMEAAYAPFNWTQE
                     DDSNGAVPIEGTNQFANGYDVQVAKKIAASMDKELLVVKTKWEGLVPALTSGKIDMII
                     AGMSPTEERKKEIAFSDSYYTSIPTLVVRSDSQYANATSLADFAGAKITAQQGVYLYD
                     LIDQIEGANKQTAMGDFSQIRQALESGIIDAYVSERPEGRTAEAANKAFKMVELADSF
                     ETNAEDVTIAVGMRKDDERIAQVNKVLATISEEEQIALMDDMIENQPVEEASEGETPS
                     FFAQVWNIVVNNWQQLLRGTGMTLLISILGTIIGTAIGLLIGVFRTAPKAANKALAIG
                     QKVLGWIINIYIEIFRGTPMIVQSMVIYYGTAQAFGLNLDRTLAAIFIVSINTGAYMS
                     EIVRGGIFAVDKGQFEAATALGFTHNQTMRKIVLPQVIRNILPATGNEFVINIKDTSV
                     LNVISVVELYFSGNTVATQTYQYFQTFTVIAIIYFILTFTVTRILRAVEKHFDTDTYT
                     TGANQMQVEVPHD"
BASE COUNT        12289 a         6968 c         8711 g        11887 t
ORIGIN      
        1 cttatttatc cgcaaaaaat atgattatta gagaattaat tgcatatatt tttttacttg
       61 ttgaatataa ccggttaaaa agcaaatata tccgaattta aaacccttta aaaagataac
      121 ttatccgaat ttaaaaatcg gttttaaagg taaaatagct atataaatca cccgaggttt
      181 aaaaatgaaa atagctattg aaaatcttaa tcgcgttaaa acgattaaac agtttactca
      241 taaaaaattg tctgaaaaaa caggttattc aaggaactca attcagaagt tgttctccta
      301 tcataaaaat agtaaaacga gattggatct cgttgtgact gtttgtaaag cattagacat
      361 tgattttcct tcaatatttg ataggaaaac agaaaattat tatggacatt ttatgtttaa
      421 tgatgactca gttaatgctc tgggaacaga gtattattta agaaattttg tgaatagagt
      481 ccaacttgaa attaaaaaca gtccacgtta ttctttaaaa ataacaactg gattgagtga
      541 atcaacaata agtgacttgt taaattttaa aacaagaaat cctcgggtag aaacattatt
      601 aaaaattgca gaaggactaa atatttctat atctgaaatg tttagatagg tattaatatg
      661 ctttttgaac catatcaaga cgaactacaa tttattgaac aaatccataa atataatgaa
      721 agagaataca cagttattcg tctaacagat acaatgctat ctaaaagcat aatagatgcc
      781 aacgtattcg ttcaggatgt tcttaaaaag tatggattaa tggactatca atcactcaaa
      841 aatggtgaga agaaaaagtt ggatgtaatg ttgtatattg gtgaagaaaa atttgaaaca
      901 aagatgtcat gctatcgtgc taacgcacga ggagatgaga ggttttggat ttatgggcgc
      961 caatttaaag aaagtttcca ttctggcgac ttgatgtaca tatctgtaga ttcaagtagc
     1021 agcagggtta ttaatattaa tatttctagg gggattttgt cagatgaaga tttagccaaa
     1081 attttcggac atgataaaat taaagaggca ttttctagat taattcctaa ggtaaaagaa
     1141 attgcttcta aaggttatca tcctaattct aaaggtacag ggaaaattgc tcctaaagat
     1201 gctggtgaca cactggagaa tttactagga attgagacta ataatagcca aaaagcagat
     1261 tttgaagatt tgattgaact gaagtctaag acttcaaaaa cacttgatac tttatttaca
     1321 ttacgtccga agtttgaagg tacgcctgta gcagaatttg agtctaatga tcgtagtcgg
     1381 gtatcagcgt ttgcgaggtt gtatggatat gaatctgaca agcatcccgg catgaatagt
     1441 ttatatatca ccattgggtc tgagatgtca cctcaaaata atcaaggatt ttatttggac
     1501 gtaaatgaaa gcgatagaac tgtagaaatt cgtagacagg agaataaaac ctctcaacga
     1561 gtggcctatt ggcattttga agatttagaa aaagagcttc atttaaaaca ccctgccacg
     1621 ctttgggtaa aagcggaaag taggatgaat ggtgacattg ctgagtttaa atacacagaa
     1681 gcagagttga ctcgttcccc tcaatttatg acattcatct ccttaattaa attgggagtt
     1741 gtaacttatg attggcgtgg ctatacctct aaagaaggta agtatgaagg taagaaccat
     1801 gggaatgcat ggcgtgtgaa gaacaaacac cgcaatcaat tgtttggtag ctcggaaatg
     1861 ataaatcttt tgaaatagag aaatagaaag gaagataaat atgggaaaaa atcttggaga
     1921 acttattgct acagtatcgg aaaataaaga aacaataaat gctataattt ctttaatttc
     1981 aggttctata ttaggaacag tattgacgaa taaaaaaaaa caatcagagg aattgagcca
     2041 acaaaaagta agtattttta acaaaaaaat acaagagcta cttgataatg gagagttgac
     2101 ttatgttgag ttttataaag caaaaaatta tggaataatt gctgaaaaag ctgaccaaat
     2161 tcagcgagaa aaacaatttc aatttatccc acatgaattt gagtttgact ggtattatag
     2221 gttctatgag gaagcaggaa tggtttcaaa tgagaaatta caagaatatt ggtcaaatat
     2281 tcttgtgaag caagtgtcat cgggaggtat ttcattaaga actctttctg tattaagtaa
     2341 aatgacagct agtgaagcta agttatttga aaggattgtt accaaaacta tactattgcc
     2401 aatgtatggt gaatacattt tgccttctga cacaaaattt ttagaaacgg ttggtatcac
     2461 ggctgacgaa atacgtgaat taatagatat ggggctaatt tcggctacgc aaaatttaca
     2521 aagaatttta ccgttgaagt tagaaattca agatgaagaa caaagttctt atgatatacc
     2581 tatcagtata ccttcttttg ccttcactaa tgctggagtt gatttattga acacgcttga
     2641 aatagaaaaa gacgagcagg ccttttcagc cttcgtagag ttatttaatg aaaagtggat
     2701 tgaagaacaa cgtgaattat atctgagcga aggtactgaa tttttagaaa aagaatctga
     2761 ggagtaaaca tgtttcaaaa cacttcctcc ctattcaaat ttggataggg tttctcatcg
     2821 ttaaaaactc tttttagtat ctcgacactt tccttcagat ggaggagttc gatttttctt
     2881 ctaagaacat cagtgttttt ctctatgttc tggcaatgtc gtttgatgtg ccataaggat
     2941 ttttgaatat tatcttcttt taaatttttc atacttctat cttatcagat aaattcttaa
     3001 aaataatgtt gctttcctca aatgatcaaa atatagcctg aaaagcacta aaaaataaaa
     3061 tatgcccaat tttcctctgt taatagggca acaaaaaacg cttaaatcag cgtttttgtt
     3121 gtataaagaa caacgaatag tttgagagtt ttacttgttg ccgtatttct tcactgcttc
     3181 gttatatgct tcactatcct ttttgtaata gtcttgcttc gttcctgaaa tatctacagt
     3241 gaatacgcca tccttgaagg tataattctc ttttcggttt atgatattag aaccagacag
     3301 ttcgattgtt gaactgtctt tatcaattgt aaaggtatca gcctctcctt tattgatagt
     3361 tcctttgtta cctgaaatgg taaaggcaac ttcatttcga ctctcgttta tccagtagta
     3421 ttcaccatct agagaattac ttgattggtt agaacaggaa attaataaaa ttgtagatag
     3481 agacactata agtaatgtga taaatctttt catttgctta cctccaatta tattatacca
     3541 aaggaatatt acaggtgtaa gacattaatt ttttaagtta gttttacttc tttcggggaa
     3601 atataaattt tttcggaaaa aagaactgta tatatttgga taaaatccac cgttttacca
     3661 cttgaccctt ctattaataa gttgtacact atgaatatat gtcactgtgt agaggttgtt
     3721 aagatgaaga gagatatgga tttatgccgt ttgatacttt ttaaaattga ggatgagtat
     3781 agatcaactg cgttgattaa tttacaaatt gacggatatg atatagaaac aatagcatac
     3841 cattgcgact tgttgtttga agcgggttta ataaaaagtt ataaaccaac gtatgctagt
     3901 gatgaaatct atttttttag tgttggtgct ttgacttggg aggggcatga ttttctagat
     3961 aaaataagag aaaatactat gtggaatagg actaagaata gtatcaaaga aaatgctcta
     4021 cctatgactt tggaagtaat taaaagtgta gcaaccagtt ttataaatga tcggctaagt
     4081 aaatatttag acggctcttt ataggaataa taaattcccc tatttcaagc aaacttattc
     4141 aatttttttg aaataaaaaa gcagtacaag tctgctaaat tttgatgtaa agctatttat
     4201 agattacttg gaattaaacc gtgtcaaacc agatcttaag aaagctcgta aagcttcaca
     4261 attctcaaaa tgttaatcca aacgttacgg ggacaacatt tgtgccgact ttttggttca
     4321 aattggttca aatgtttact cgcttaatga attcaataaa tttaaggcat cagcatcttg
     4381 ctggtgtctt ttttcaggta ttaactccag ataatagttc tgtgtagttt gaatattgac
     4441 atgaccaagt ctttttgaaa catagacgat gtcaatgtcc tttgagaata aaaatgaagc
     4501 atgagtatct cgaagaccgt gaaatgtggt ttttgggatt cttagttcct ccagtaactt
     4561 ggctaacttt cgagattgat gaaatccatc agggtcgaag aagtatccat tttcttttac
     4621 tggaactgat aggagtaagt catagacttc ttggcaatac tatagtatga cttttttaca
     4681 aagccatcta tcattctcat ttttattaaa acggactgtt ttgccgattt tgattacagg
     4741 aagccctttt tgaatccagc tagctttgga taatgaggct aaatcaacaa aaactatgcg
     4801 agcaaattgg tcctatcaag atgtggaaag caaggtctgg cagattccta aattaacaga
     4861 tttctgggga ataggtcatc gaacagaaaa acgcttgcac cagctaggga tttattcagt
     4921 aaaggagcta gccttggcta atccagatta tcttaaaaaa gaatttgctg tcatggggat
     4981 ccaactctgg ttgcatgccc atggggtaga tgaatctagt ctcaagaatc cctatcgtac
     5041 caagagcaag ggaattggca atagccaaac tgtagacagg gacgataccg ataagcagga
     5101 actggagatt ttgttgcgag gttttaccag ccaagttgct caacgtttgc gtaaaaaagg
     5161 gaagaagacc aagagagttg gcttgacgct catgttttcg agtagagaga aacggatgcc
     5221 tcttctggtt caacggacta ttgaatcaac tagtgattat aagcgtcttg cggctattat
     5281 cattgatttg tttcgtgaaa aatataagga tggtgctatt cgtcgagtag ggatccgatt
     5341 taatcagtta gtagacgagt ctgttatgga gattggtttg tttgatgatg tagaagagtt
     5401 ggaaaaaaat gagtggctgc agaaggctat agatagtatt caaaattagt acggctttac
     5461 ttcgctggtg acagcagatg tcttggatcc tgcatcaagg gtccttgaac gcagtagact
     5521 ggtgggggac attccgccgg tggattggag ggattgaaat gattgattgc agttatttgc
     5581 cgtatgattc ggttcggttc tatcaggata gagggatggc taaatggatg ggtttcttca
     5641 tttcagagca ttcgacggtc ttgcaggagt cttaggttac tctagaggag atggagcaat
     5701 tgtccctgtc ccagaaactc ttccttctca atcagttgtt tgtccaacaa ttgtcgggaa
     5761 aatttctcgt tcaggaaggt agcgagcgtc ggtattgcat aggaaggatt aaggatctat
     5821 ctcgggaaca tctggttttg aaggagaagg aaggacatgt gagagtttct atggataggt
     5881 tgttggcgtt tgatttggag gaagaagaat gaagaaaagg ctggattgac aagatgaatg
     5941 gcagtttgac tatttttcgg acaattacta tcagtttgaa gaggattttt acaaatattc
     6001 ggccttggat acttccttga gctttatggg ggatgatatc ctgatgacaa tggcaagttc
     6061 ggggaaatcc tattttcgtc tcaataagga agtggctaag gatgggcggg atcattatta
     6121 catctttaga ataaaatggc agaccccaaa gtgctgagtc gaacctttgt ttatgtaggg
     6181 atgacagttc agttaaagag tgggaatcgg gtgtagatga taggagaaat cgtagtattt
     6241 tttgtcagtt tatcttaact tttttttctg aaatttgcta taatattggt agaatgtaac
     6301 tctaggaggc tacttatgga agtcaaagat gtcatggaga ttttggaggg tatgaagcta
     6361 gggatttttt caacagttga tgcggttggt actcctcatg cacgtcctat ccatattgca
     6421 gctgctaatg aagatggtgt attctttatg actagttcgg aaacgcattt ctatcagcaa
     6481 ctgatggggg atgagcgtgt tgccctaact gccctatcag aagaagacta tttaattcaa
     6541 gttattcgta tcgagggaag agcgcgtcca gctagtcagg agctattgga gaaggtcttt
     6601 gcagataatc cttatgtcca acatgtttat aaggatgaag aaagtcggaa gaccatgcag
     6661 attttccaag tttatgcagg agacggtttt taccacagtt tgacacaggg acataagtat
     6721 gtctttaaga ttaatggtgg agagagccaa gttaggacga tttaaagggg ggaattttac
     6781 cttcatcgct attctgtgct atactggaat gaaaaaatga aagtaaacaa tgcaatgacc
     6841 aagtatgccc tttttagtta tacgacaggc aatattggag acgaaattca atcagtagcg
     6901 gcgagtcgtt ttttgccgca gattgattac ttcattagct gataaaataa agttgataat
     6961 gaacggttga tactcgcatc ggccagaaaa tttccctttg agaaatgaaa aaaagaacca
     7021 ttactaattt caatgtttat tgatgagcct gtgcagcaac aattttctac tgaggaaaat
     7081 agagcttttt tcacaaaata tggaccagtt ggtgctagga gtagggctac aaaagacttt
     7141 tttgatagga ttggtgtgga ttcctactgg tcaggttgtt tgactttgac tattcaacca
     7201 gaaaaagata ttgcaaagag agatattgtc cttgcgattg atttaccgaa tgctgtttat
     7261 gacaaactag tcaaagaatc gaattatcct gttattcgga tgagtgcaga tatcaatcac
     7321 cagtatatga gtccaatcca acgaatgaag attgctcagt attatctcta tcaatttgca
     7381 cgatttgttg tgacgacgcg tttgcatggg accttacctt gtctggcact cggaacccct
     7441 gttttgaata ttcaagaaaa gggatttgaa gaagggcgtt ttgcgggatt acgtgaactt
     7501 gcgcatcatg tgacggttga agaattttta tcaggtatat atgatatcaa taatccttta
     7561 cctaatcctc agcgacattt ggaaattcgg aagaatttag aagaacgttg ccaggcattt
     7621 acaggttttt catcatctaa aggatttcta aatggtcaac cattgttaga atttttagcg
     7681 gatccagatc ttatccaatc agtggtgaca ggactctggt cagcgcatca acaatatggc
     7741 atttatcggt aaaatgagga agggactggg aatgaagtcg actgattagt caataaatct
     7801 ttatttttaa tgttcggatt agctgtagtg gtcagatttt gactggcaaa gacgaacaaa
     7861 gctgcctatc aaccactgtg ctgagatgtt gatgcgaact ctgagaagtg gcgctgggct
     7921 tgagcccagc cttattggta taagagataa acctatagat tttattgcaa acatattgaa
     7981 tgcatgctac catagtattg ttacccgttg tactagttaa tcaagcgtaa gcaagggaat
     8041 attttaagct gataccaaat tcagtatgac tgcttttaag caaaagagaa tagataaata
     8101 atattgcttc tgtcttaaat ttgagcgcct gaatgtttca gcaacgtaac cccaccattc
     8161 caaactgctc taaactagaa aatacggtct caactggttt cctcaatcga cttattttgt
     8221 aattttctag ccatgaataa gccatcatgt tttttctgag ttgagaaatt aactggatac
     8281 catagtctgc taacgctgcc tttgtctgtc tatcaacata tcctttatct ccataaacga
     8341 ttggaaatgg gctactttca agtagctcca aagcaacatc gccatcataa atagatgcgg
     8401 gtgtgatgac ataatcaata ggaaaaccac tatcgctgac aagaactgaa aatttcaaac
     8461 cataataatg gattttctta gtcgcattat agccaatatc tgccacatct gataacaatg
     8521 tagctctcat gttgcgaatg gggtgacata gggcacaagg aaagctgtca atcaagccga
     8581 acgagcaggt ttgacaaaga tttaagacta taaaatagcg catacgctga atactttgag
     8641 caagattttg acagatacgg taaaatcgag agcgttctgg gaagttgtca gggaagagat
     8701 tatgacgaat cgcacggtaa atagcacttg ccgtccggca gccctcttga attgcccaaa
     8761 gataactagc gataacaacg acatcagact gtttttgtag gtggatgttt cgccgatttc
     8821 gaacctcatg aggaacaaat cgctcatata aagcgagaac ttgggtcaag atttttgaaa
     8881 aaacaacttg tgtttgattg ggatttgcga gataattaat gttgactttg catatcattc
     8941 cctcatttcg tggttgtttt gagtttatga tacgcaaagt ttttttattt ggctagaatt
     9001 aactagcata acggttttat tgttgaggct gggcaaaaag cccaggacca ctactcagag
     9061 ttcgtgtcaa catctcagcg cagtggttga ttggcagatt tgttcgtgtt ttacactcca
     9121 aatctgacct aatcaactgt gcgggggtgg gaagacgaac tcttctatga atggtcgagt
     9181 tctttcccac tcccatttag tttatcttag aatacttcaa cgagcggtgg agtgggaaag
     9241 acttgactgg actattttac taccaccttg catatttcaa aaggtttaga gaaccgttga
     9301 gattggaaat aaagtgcatc tatcataaaa ggtcgtattt ggagtgggca acacaacaca
     9361 tctgccaatt aaccactatg ttgggatgtt gatatgaact ttgaaaagtg acgctggact
     9421 tgagtcgagc ctcattagta ctaaaagcaa actaagtaac tataaataaa tatcgaggga
     9481 atgaaattgg aaaaaatcag cgtgatagtg cctgtctata atggagaaaa gcatcttaga
     9541 cagtgcgtcg agtctattat ggctcaggaa tatgaaaatt tagagatact gttaattaat
     9601 gatggttcca aggatggctc agctctcctt tgtgagcaat taaagtatca agattcacgg
     9661 gtaaaagtta ttcataaacg acagaatgaa ggtcttggtg cagcaagaaa tacctcactt
     9721 gatgtagcta caggagaata catcgttttt gtagatgcag atgattggat agatcccaac
     9781 catgtaagtg atctatacga tttgatgaaa cggacaggca gtgacgtagc tatttcaaac
     9841 tttacccaat ataatgaaga tacagggcgc tataacatac atattcttcc tgaggactac
     9901 tatgaagcgg tatacactcc tgaagaatgg tttaactatc aatatggagt agggcataat
     9961 attagcctat gcttcacggt tccttggtct aagatgtata aaaagtcctt atttgaatac
    10021 atactctatc ccacagatgg ctttggagaa gatgatcgaa cgacttggaa aacatattta
    10081 gctgctgata agattgccta tatgcaccgt tctagtttga tttatcgtat caacgaaggg
    10141 tccatgacgc aaacagcaga ccaggctact attttttcaa cggttccagt ggcggagcga
    10201 ttagaagtat tggggttgct tggttttgat ttgtcaaagg aaattgcggc ttttaaatgg
    10261 cgttcgcaga tcaatcgtga cagcaaacta cgtcagggag atgtagtagc ttataagaat
    10321 ttggaattcc gcaaacgaat gatagaaaag tacggtaaac actaatgcga gtatacatta
    10381 caaacttaaa tggccatgcg tcctctagca cggcacaaat ttgtcaaaac atggtgacag
    10441 atgttgcgac tacgcttgga tatcgggaat tggctattca tgcctatcgc atggatgctg
    10501 atacaccgga ggaactcagc aaacgtctgg atggtgtcat tgcggggttg agacatggag
    10561 atgtggtcat ttttcagacg ccaacctgga atacgacagc atttgatgaa aaacttatgg
    10621 ccaaattgcg tgcttaccaa ataaaaattg ttatttttat tcacgatgtc gttcccctaa
    10681 tgtttgcagg aaactactac ttgatggacc gtacaattgc ctattacaat caggcagatg
    10741 tgattgtggc ccctagtcaa cagatgattg acaatttgaa acgacacgga ttaacagtcg
    10801 ctaaaacgat tgtccagggg atgtgggacc atccgaccag tgttccacag ctaccggcaa
    10861 gtttcaaaaa agagattcac tttcctggtt caccggaacg ctttagcttt gtcaagtatt
    10921 ggaactatga tgtacagttg aatttatatg cccgtcaaga ggttgaatta ccagaccaag
    10981 tgaaacattt ctcttatcga ccggatgaac agttattgct agagatgtct gaaggtggat
    11041 ttggattagt gtggatggat aatcatgata aggaatatca gacactctac tgtccttata
    11101 aattgggagc ctttgtggct gcagggattc ccgttattat tcagcgcgga attgccaacc
    11161 aagaaatagt tgaaaataac ggattgggaa tgattgttga tagtttagct gaagctgtgg
    11221 atcgaatcaa ttccatgtct gtagaagact atcagaacat ggtagttaag gttcgttctt
    11281 tcagtcctct tgttcgacaa ggatttttta caagaaaatt attgactgag gcagttttta
    11341 aagccaagtg tgaagaaaat ttatgagaaa attagaagaa attcgggtac tgcccatatt
    11401 agaaagtcta gcctatatcc ataaaaacga ttcctcagtt gtacgttttg gtgatggtga
    11461 aattgatttg attctcggtc atagtatacc ttatcaggct tatgacaaag aattggccca
    11521 agatttgaaa gcaatcctgc aaatgcccag tgatgagcag ttgttggtat gtttaccgga
    11581 tgtttttcaa aatcttgagc gatataacag taatgcgcgc tatttttgga ataaacattt
    11641 tgaaaaatac cgtgaatttt atgaggaaga atgccaatca gattggtatg gctcaacctt
    11701 tttatcacgt ccttatatcg atttagttga taagagccaa tcagaacact attttgctgc
    11761 catcaaagga ctttgggaaa aacgagacat attaattgtt gaaggggaaa cctcacgctc
    11821 tgggatgggg aatgacctat ttgatggagc aacttctgtt tcgagaataa tttgtccgtc
    11881 caaaaatgcc tattcatctt acgatcaaat tctctctgcg attctagctc atgttgagaa
    11941 cagattggtt atcttgatgt tgggaccaac tgccaaatta ctttcatatg atttgatgat
    12001 gcgaggttat caggcgattg atctaggcca tattgattct gagtatgaat ggtataaaat
    12061 gaaggctaca acaaaggtta aattgggaca taaacacact gcagaattta attatgatga
    12121 aaatattgat gaggaagttg atgcaactta cctaaatcaa gtattagaat gggtttctgt
    12181 cccagcaaaa gcgcaaaaat ccaaagagga gaaagaaatg aagtccgact tgataagtgt
    12241 gattgttcct gtctacaatg tcaaacccta tctgacccgc tgtttagact cactgttgaa
    12301 gcaaacccat actaattttg aattgttatt ggttaatgat ggttcctcag atggttcggc
    12361 atttgttttg gaagactatg ccaagaagga tcagcgcatt cgcattattc atcaggaaaa
    12421 tagcggtgtt tccgctgctc gtaatcgcgc tatagatgag gcgcgggggg aatatattac
    12481 atttattgat tcagatgatt ttgtagaaga tttttacttg gagcatctat ataaggcagc
    12541 agtttcgaca gggtcagata ttgctgctac caatttttct tcatttaatg aagagagaca
    12601 gagcttttta ttttaccata ctaaggaatc ctattttcaa aaggtatata cggtacaaga
    12661 atggatggat ttagaaggaa atatgaaaaa caatatgcac cttgccttta cattctcgcc
    12721 tttgaagttg tttaaacggg aactttttgg agatatacgt tatcctgttg gtcgtcttcg
    12781 cgaggatgat gcgacaatgt ataagttgta tctaaaagcc aaccaaatac actttactaa
    12841 tgaaggtccg tattactact cacaacgagc tgaagggctt tcacgaacgg taatgctcaa
    12901 tgatattgca accatgatat caaatgccga agagagaatt tctttaatgg tggcgcttgg
    12961 ctacaatccg gctgctcaag tgaagtcata tgtcgaacgc ttaaaaaaat gtcgtggtga
    13021 cgccctatat gccggccaaa tcaatcttta ccggacaatc tgtgcaaaaa ttgatttgtt
    13081 tgaaaactat cagaaaaggg agaactaaat ggagaaagtc tcagtcatag tacctgtcta
    13141 taatgctgga tcttatctga cacagtgtat cgacagcatt ctaaatcaaa catatcacaa
    13201 tattgagctg attctagtta atactggttc tactgatggt agtgcaacaa tatgcgaaag
    13261 ttatcgataa gtagattatc gattctgttt gataaataaa agtcttggtg gtggtggagt
    13321 aggagctgct cgtaattcag cccttccact cattacagga gaatttgttc tttttgtaga
    13381 taatgatgac tggttggaac caaaccatat cgaagttctt tacaaatctt tgaaagagac
    13441 agattttgat atttccattg ttaattttac ccagtttatg gaagaacgaa gtagctatgc
    13501 ttttcatgtg acagaaaagg attgcttcca agaagtattt accccacagg aatggttttc
    13561 tcgagaatac aatggacgat ttgcttttgg tcagtgcttt actgttccct ggtgtaagtt
    13621 atataaagca tccatatttg aaaacattag ctatccagaa gatgaaaagg tggaagatga
    13681 ttacacgacg tggaagcact atctgatggc tgatcgtgtt gtattcacga atgtagcatt
    13741 gtactaccat cgaaaatgtg aaatgagtgt cacaaaaacg gtagattcaa cctatgtctt
    13801 tcctttaaaa agtattgagg aacgtgttac tattttgagt ttgattggtt ttgatatttc
    13861 tgaggaatta aaagcctatc gctggagact gaatcttcat ggagaaagtt acttagcctc
    13921 cggtcatatg caagaatatc aaacatgttt gcaaaaaatt gctattctag aaaaatggaa
    13981 taagtgattg tgaaacgaag ataatttatg attgaaataa ggtagagaat gtaaactact
    14041 tgaaatggcg agggcggatt gccttcgctc tatcatatgt gagcataaca tccttagata
    14101 tgatagaaag aggaaataga tgtttaaaca gttagtgaaa aggattcgag ggtcgcttat
    14161 tataaaacgt gtactttggt ctattggagt tgtatgtatc tatatgttag gaaagtatat
    14221 accaattggt acggttcctc tatatagaaa tgtaagtgct actggttttg acttgacaga
    14281 tgctttagat accttagcga tggtatctgg aggaaacttt tcaatgcaaa acctattctc
    14341 tttgggtatt agtccgtgga tgaccagcat gatactttgg cgttttttta gtctatttga
    14401 aattgtaaag gccgcgacca aacgtcaaac ccacttgtat cagatgacct tgatgtttat
    14461 agttgccttg atacaggcct atggttttag tagtgtcagt gattactatg atattgtaga
    14521 gctgggtccg gcaagtcaga cacttttgcg tcttgcctcc atggtcatta tgattgcagg
    14581 tagttttgta ttatcatggt tagccaacct caatgctcga aaaggtgttg gaggtccctc
    14641 agtcattatc atttcaaata tgaccttgaa ctttttattg aatatcgttg cacttattag
    14701 tcagaatagt tttaatcctt tggaatggat gctaatcact ttggcaatag ttctgggatc
    14761 aagtctgctt atctggataa ctttagtcgt ttatagggca gaataccgca ttccaattcg
    14821 acggatcatg attgttagtt cctttgcaga gagaacttat attccaatca gattaacacc
    14881 tgctggaggg atgcctttca tgtatgcaat gacattgatg acactacctc ctatagtaat
    14941 ttctattctg ttaggattct ttcctgataa tcagtggatt cagtttcttt cggcaaattt
    15001 cagtatttct caattgccag gaattctttt ttacatattc ctattattta ttctagcgat
    15061 tggattctct tactttaatt tagatccagg ggagattgct gaagggatgc aaaagggggg
    15121 agattttatc gaaggagtca gaccaggtct tgctacaaaa aaatatatta ataaatattt
    15181 gtggcggata accataattg gtgcaatcta cacagccgtt ataggtggat taccaatgtt
    15241 aattgtctgg agccaatcgg gtcagatgag ttttgctttg ttgattaata atatttatat
    15301 tatgacaacg ctgatgcttg gtattgttga gcaaattaat gtaatgctga cttggaaaca
    15361 gtataacgac ttgatttaaa ggagaaaaca tgtattattt cattccttct tggtacagtg
    15421 gagagcacaa gtgggcagtt gaaactccct attggtttcg agtatttgag aacatgagtt
    15481 ttgatgatac ggtcaatcaa ctaaaaatgt ttcaaaatct taaagaagag tcagctatac
    15541 tattgttaag ctaccagcct caattgaggt attttgtaca taagcaggga ttattaaata
    15601 gtccgtactg gtccttcttt gatgatattc agaatattcg tagagaagaa acaagtttta
    15661 ttgactttaa agaatttgag tggccccaag gtgttcgctt tgtttatact ccatttaaag
    15721 tagttgtaat ggagggagaa gtctgcattg ctgatgtaca ttttgcagag aacggcaatt
    15781 tacttcaaat ccacttctta gatggggaga aggaaacaaa gagactgcaa tttgatgatc
    15841 gcggttttct gtctagtatc cgctattata aagatggtat tgctacctat caggactatc
    15901 tgaatgaatt tggtgtatgg caggttcgtg aattattgac aagcaaagaa cataaattgg
    15961 aagtcaatcc tcaatcggat aaaggatttc gaaaagctgt ttatcaagat tgggaagaat
    16021 tatttgctga acgtttggaa gttttgaaga cggaagtctt atcagaacag gataccttag
    16081 tggtagcttc agatatccga cataatgatt tggtgttgga tcaattcaaa gcatacaaaa
    16141 agattttttc attcttcgga gatcgttttg atttaacgaa tacacctgcc ttggctcgtg
    16201 tcatggcaga atcggatttg attgtcattg attcagaggc tttagaatta gctttacaac
    16261 aggaggtagc taaacattct ttagttgtac gtaatatgac gagagtgact ccttttgata
    16321 cccgtcttcg cttaggacaa agtcaaacga taaaagaact gattatttat ttcctgattg
    16381 atggtctttc gaaagaatta gtagatcaag cgattgctat tttgttggat gtgatggaag
    16441 agaatcctgc tattgagtta catttgttga cttacgaaag aaaccattca atggaacagt
    16501 tatcagaaca attgttagag aaaattcgta agggctattc actagagcgt tttgtttcgg
    16561 ttgaatcaaa agacggtgag aatcagttag aggaagatga atctctagaa ctttccgcta
    16621 tcaagttttt agcattaaac aatgaaaacc aaattataga agaactagat ttgacgcgtt
    16681 tggtgataga tttgagtccg aatccacact tgtatactca aatagcaagt ataagtgcag
    16741 gaatccctca aataaataga gtcccttctg aatatgtctc gcatatggaa aatggctgga
    16801 ttatccgaaa tatggaagaa ttatcgacag cagtggggta ttattttgat ggcttaagta
    16861 attggaatcg ctccttagtc tatactgttc agaaaatggg tgattataca agtggtaaaa
    16921 tcattgcaaa atggaaagag ttattggaag atagaacatg aagatagtac aaattggaga
    16981 agaggactgg tcagtcggta ttgatttgcc agaaagccta gaatggtttt gggtgacaga
    17041 agataagatt caagaattcc ttgataatca acgagcagaa gaaatagcta aattacagat
    17101 tgaagaatca gacgaggaaa aaataccccc taaaattagg ttgcgctata atgcaataat
    17161 gttgacaagt tcgattagag aagaagtgct ttcaccactg tcctcaacaa ttgaagcata
    17221 tagtcttttt aaacagaagg atgtatcagt ggacaagcaa tcagacactg gtattagtcg
    17281 ccaaaaggta ctgcgagacc ttccttttca agggtctaaa caagagacaa tcgagtattt
    17341 atatcgcaac ctctttagtg gacagtatgg ggcgaagtta aaaattcctg agatagatgt
    17401 caatccaaat tttactggta gggttcagta tgatgggaat gtgggggtta tatttgatgg
    17461 gcaatttggt caggattatg agaccttgtt ttcttttcga tataacctgt catccttccc
    17521 tatgtcctta gaattatggt cagaatttat caaggaatct ggagatacct ctatccgaat
    17581 ggaaatcatt gcgcttcgaa aaggttccct aggggagata tacgaaatag tctatctaga
    17641 tgagacacag ctattggaac cctatgtatt acaggctaat gaagaagttg gtttttattc
    17701 catctcattt gctgtcaaag gtagaggacg attgaagttc ggtgtgactc attggcgcta
    17761 ttcgagagaa ggattaggaa aatttattct gggcggaaag ggctactcag attgtaagag
    17821 gcaagaaatc ttttcttact tcaatccagg agatatgaag ccgccattga atgtttattt
    17881 ttctggtttt cgacaagcag aaggatttga aggttttttc atgatgaaat caatgggtgc
    17941 tccttttgtc ttgatagcgg atccacgtct tgagggtggc tgtttttact cagggacgga
    18001 tgaattagaa aataatgtca aacgcgccat tcaagatgcc ttggattatc ttggctttac
    18061 tagagaacaa ttgattctat caggcttgtc tatgggagca tttggtgcat tgtactactc
    18121 agcctatttt cgacaacatg cattagtagt ggggaagcca ttcacgaatc ttggcgattc
    18181 tgttatgaac ctgaaattaa aacgtccaga cgaattcgaa accagtggcg atatgattcg
    18241 aaatgttgta ggtggatcag accagacggc gattgatcag tttaaccaat atttttggga
    18301 taagtttgct cctgtctcct tcgataggac acagtttgcc attgcctata tggagcagga
    18361 tgattatgat ggacatgcct tggaacgttt ggtggaacat ttggcagata gtgataccca
    18421 catttttgcc aagggctacg aaggtcgaca taatgataat agtcgggcca ttaaccgatg
    18481 gtttattgca caataccatc aatttctaaa aaatgatttt ggaagggagc tctaatgtcg
    18541 gagtattttg tacaaaaaat ctattggggg gatactgcaa atggcggtga ctacctttat
    18601 gggtcagaaa tccaacactt cgacaatggt gttagattta gcaatcaacg atttgcatct
    18661 ggaaaaccaa ttaaaaaatg ggaatcacgg acgaattatc aaggaaatcg acgctctcct
    18721 gtactcccct tattacgacc aggggcttct tatcgattaa aacaacgttt tcgagttgaa
    18781 ccggctggac gggcttacat tcaactccgt tttctcaacc gacgtggaga tgaagtagga
    18841 ttaataattt taaaaaatgg ggaagaggag tttacctgtc caattgattc ctttacctat
    18901 accatcacac tttgtagtgc cggctgccac agtgttgatt ttttctatct atcactttat
    18961 agtatggaga agccacgagc tattcactta tcggatgaac caagaggatt ttacgcaaat
    19021 gaacggtatc ctaaagacat tgcatttgta aaaaacttag ttcaaaaact taagaaggag
    19081 gcagtgggat gaaagtaaag gcaaattctt cttttttgaa ccaagtaagg ttatttaaaa
    19141 tcaaaaggat agcaaagaaa attcttcaat tggaaactca atatcatgag ttatctgatg
    19201 aagaactggc gaatcaaacc gtttatttta aagagcgatt agaacagggt gaaaccttag
    19261 atgatttatt aattgaagct tttgcaacgg tacgtgaagc gagttttcgg gtattgggac
    19321 aacttcccta tgaagtacag gtcatgggag gaattgccct tcatcagggc tgtattgcag
    19381 agatgcgtac aggtgagggt aagactttga cagccactat gcccctttat ttgaatgccc
    19441 tcactggaaa gggagctatc ctagtaacaa ctaatgatta tcttgcaacc cgtgatggtg
    19501 aggaaatggg caagatttat caattcttag gtttgacagt ggggcttggt gcaaaggaag
    19561 aagatgagaa taccgaggat aaaaaggggc gagcaagcgt ctatgaagcg gatatcacct
    19621 atacgactag ttcaattctt ggttttgact atctgtcaca taacttagca tcatctcctg
    19681 aggggaaaat tctccgtgac ttcaattatg tcattgttga cgaagcggat gctgttttac
    19741 ttgatagtgc gcagacaccg ttgataatat ctggttcacc tcgagtgcag tcaaacctat
    19801 ttgatatctg taatcagttc attctaacct taaaagaagg ggaggaattc ttttttgacc
    19861 cagataaaaa agaagtttat ctgacagata aagggaatga ctacgcagaa tcttattttg
    19921 atattaagga cctctatact tcggaatcct gggagttaaa tcgtcacatc aatttagctc
    19981 tacgagctca ttatctatat cgtaagaatt ttgattatgt tgtacaagat gatgaagtaa
    20041 aattgttgga taatcggacg gggcgagtat tagaagggac acgactccaa tcaggtattc
    20101 accaagcgat tgaaacaaag gaaaaagtca aaaaaacaaa ggaaagtcgc gcgatgggat
    20161 cagtgactta tcaaagcctc ttcaatatgt ttcctaagat tgctggtatg actggtactg
    20221 gacaccaggc agaggatgag ttgattgaaa cctatcatgt accagttata tcgataccta
    20281 ccaataagcc tatccagcgt atagactacc cagataaaat ttatacgacc ttgccagaaa
    20341 aactctatgc gacaattgaa atggtaaaag aactgcacga aaaagggcaa ccagtcttac
    20401 taatttcagg aactgtagaa attacacaaa tttactcaaa aatgttgttg caagaaggaa
    20461 ttccacacag tacccttaca gccaataatg tggcaaaaga ggccttgatc attcaagaag
    20521 ctggccaata tgggacggta acttgtgcta caattatggc tggtcgtgga acggacatca
    20581 aacttggtaa aggtgttgca gagctgggag ggttagcagt tatcggaact gaacgtatgc
    20641 ccaacagtcg aatggactgg cagttacgtg ggcgtgcggg ccgtcaaggc gaaccaggaa
    20701 tgtcacaatt ttttgtatcc ttggaagatg agttgctcgt cagaaatggt cctgattggg
    20761 tgaaaaagta tttcaaaaaa aataatcatg aaaataggaa taactatggc caaccgttga
    20821 aatcaggccg ttttaatcgt gctctaacac atgcccagac caaaagtgag gatggtgcga
    20881 ttagctctcg tcgttttaca attgaatacg atgaaagtat gcgcattcag cgaaacaaag
    20941 tctatgctct ccgtgatcga ttgatgacgg agcaggaaaa tctagctgag aaagtgagtg
    21001 caattgtcaa agcagttatt gaagattatt tacaagaata tccaaatcgg acttctagtc
    21061 aggttcgtcg ttatattcta gacaactata cttactcttt gaagacaatg ccagatggat
    21121 tttctgcaaa aaaagataaa catgtaaaaa aactgatcta ttcattgttt gagaaagaaa
    21181 tggctaagaa aactagtatt gttcaaacac atgaggggat gtctgaattt tatcgcttgg
    21241 cagttttaaa ggctattgat gaagcttgga ttgaagaggt agatacgctg caacagttga
    21301 aaggtgtaat aacgacgcgt tcaacagcac aaaaaggaag tgtctccgag tactacaaag
    21361 aatctttgcg ctcctacaag gaaatgactc gacaaattca gcaaaaaatt gtacgtaata
    21421 tcatgttaag tactatcgaa gtagataaag agggaaggtt ctctatttac tttgtataaa
    21481 gtgaaatgag gaaagtgaat gacgatttac aatatcaacc gagggattgg ttgggccagt
    21541 agtggcgttg agtatgctca agcctatcgc gcgagcatac taagaaatat tcatcaagac
    21601 agtaaattta tttttacgga tatgttccaa ggtgaaaacc ttgcacatta tacagcgaat
    21661 attggttttc aagatgagga agtagtatgg ctgtatggat tttttactga tgtgaaaacc
    21721 agatcgacaa cctataccat tggtcagttt gaatcgagtt tatcatctgg tatggttaaa
    21781 atctcacaaa acaatgattc tatccgctat gaagataagg aaaagggcat tgtagccatt
    21841 ggttttctga gaaaaaatca cccagactat gtacaacgtg tcgaatacct atccaaaggg
    21901 aaactgattc gtaaagatta ttttagttac actaaaatgt tttcagaata ttatgcacct
    21961 gtcgacaatc agcctaagtt gtatcaacgg acattcttca atgaagatgg cagtgtagcc
    22021 tatgaagaaa actgtgatgg tgaaaagtca ctattccgtt tcaaggatac aattttattt
    22081 tcaaaagaag aattgattgg ctacatgttg gattgcttgc aattgaccag tcaagatatc
    22141 attcttgtgg atcgggcgac aggaacaggt caggcaattc tgcgtcacaa gggagctgca
    22201 aaggttgctg ttgtgattca tgcagaacac tacaacatta attcaatgac agaggatacc
    22261 attctctgga ataactatta tgaatatcag tttaccaatg ctgataaaat tgacgccttc
    22321 atcacatcca cccaggctca gaaggatacc ctatctgccc aattcaagaa atatacggat
    22381 aaggatccgg cgatttttgt cttgccggtc ggtagtctag ataaattgtg tcagtcagct
    22441 gaaggaagac gcccattctc actacttacc tgttcacgtt tagctgcaga aaaacatatt
    22501 gattggttag ttgaaggtgt cgtcttagcg cagaagcaac tacctgacct aacatttgat
    22561 atttatggtg ctggcggcca gcaatcgaag ttggcaagta tgattgagca gcatcaagcg
    22621 caaagttata ttcatctcaa aggacaccat gatttgactg atatttatca gcagtatcaa
    22681 gtatatctga ccgcctcaac tagtgaaggc tttggtctga ctctgatgga agctatcggc
    22741 tcaggtttgc cgattattgg tctggatgtt ccgtacggga accaaacctt tgttgaaaat
    22801 gaaaaaaatg gttctcttat tccgagacag gacccagatg atgccattat ctatgcacaa
    22861 gaatttgcaa agcgcttgat tcaactgtat caatctaacc aattggatgc ctggcatcag
    22921 gcttcttaca agcgggcaga agaatttcta accagtcgtc tagaagaagc ttggcaaaca
    22981 tttatcgagg aggtgtaagc aatgatttta ttatttgatt attttcatac tgctagtcaa
    23041 gatttgtact actccttgaa gcaagcaggg cttacaggct ctactgttgc catcaacgat
    23101 gatggttttt tgccagaagg tgtgacatcc gtttattcat actattgcca aatggaagcc
    23161 ggtcacggaa aacctcttta ttttaatcag ataaaggtgc caccattctg ggaaattaca
    23221 ggcactaacg gtgagggaga aatctgggaa tatagcgaaa aacgtgcgaa aattttctat
    23281 gcagagccca agcatttacg acatgtgaag aatgttgatt ggatggataa gaatgaaaaa
    23341 gttcgtttta cagaccatta caatcaatat ggctggctct atgctcggac ctattttact
    23401 gcagaacaaa aggcaacaac gcgtagttat tttactcgcg aaggcttgga agtcattgta
    23461 gaaaacttta tgactggcga tgttatccta aattggcaag gaaagaccca tttttttgaa
    23521 aatcgtgtag catttttaaa acactacttt aaagagatgg gctgggatac ttcgcaaatt
    23581 tggtataatt ccctgtcgac tccttttttc ctatcttaca atatgccgca accaggacag
    23641 gatattcttt tctggcagga aacgatagga gaggatattc ctggtaatat gaaaatttta
    23701 ctggctagtg ctactcaacg cacccagacc gtcgtggttc aggataaggc tacttttgac
    23761 aagatgcgga cgcttctgcc tacagaacag gctgaaaagt tagtgtatct tggctatatc
    23821 taccctcaaa gacgtgagaa tcagaacaga caagacatct tcatttttac aaactcggat
    23881 cagattgagc aactggacta tttgacgact gctctgccga atttcaaatt ccatattgct
    23941 gccttgactg aaatgtcaca gcgtttgatg gcttttgata ccaaggacaa tgttcaactt
    24001 tacccaaata tttcacaaag ggcgcttgaa cgattatatg atacctgtga catctatttg
    24061 gacatcaatc atggaagtca agtaatggaa gtggttcgga aagcctttga gcaaaacatg
    24121 gtgatttttg cttttgaaaa tactgttcat aatgcttcgt taattattaa agatcatatt
    24181 gtacctcagg cagaaccaca caaattagta gaactactga atgcgaatgc tgggcgactg
    24241 actgacaagg tcgttgaaca gcgcactcat acaagtaatg aatttgtgga aaactatgta
    24301 gctatcttag gctaggggag gcttttgatg acaaaaaaaa atcaactatt agaagatgaa
    24361 atcactcaac aaattcaaga agctcgttac gttgaaccaa aaccggataa gaaaagacga
    24421 ggtcttttct ataaaaccat cattttctta gttacactag ctattctcta ttctctatta
    24481 cgtcgattct agagaaggct tatccttaaa agaggtttat caaacctctt ttttgaatat
    24541 tcagaatttg caaatttttc ttgaaaattg ataaaaaata tgagaaaatg atacaaatta
    24601 gaaagatgag aaggctaatg agagaagata ttcagattaa tgaacgtgcg ttaactgtat
    24661 cagaacagtt ggtagaggtt ttggaatcta tttacgatcc tgaaattgaa ctagacatct
    24721 acaatttggg tttgatttat gagattcatt tagatgaagc tggtttttgt aaggttgtta
    24781 tgacctttac agattcaggt tgttcttgtg cggatactat gcctggtgaa ttggttgcgg
    24841 ccttgaaaac gattgatggt atcaacgatg cacaggtaga gattgtctgg tctcctgctt
    24901 ggaagatgac ccgtatcagc cgtcttggac ggattacgct tggtatcagt ccgaaataaa
    24961 aagaaaatga gttgcgtgga gcagctcatt ttttatatag tcgaatgaat tagctttcag
    25021 acaaggaact gaggtgcagg ctgctagaac agcctagagg ctattctagg ttggaaataa
    25081 gacttgcgaa gtaagtcact ttcgtagagt acggcaagcc gaaagtgacg atgtatcaaa
    25141 gttaattcaa atgactatac gtctcatcgt actgtctgtc taattcttcc atggtttcat
    25201 aaacaggctt gggaatcatg ataacttgcg gatccaaatc gaccatacca tagctcgggt
    25261 cgatgcattc ttcccaatat tctaaatgtt ttttgtcgat ataggattct gaatcttcga
    25321 cttcaatccc tccttcagct tggacagagt accagtagag gtattcgcgt ccgtccaata
    25381 cctcacggaa gatggtttcg acatacattt tctctccttc aagagtgaga agggtgtctt
    25441 ccatgtgctc gttgagaaag gtcatccact ggtcaacgac agctgacttt ccctctttga
    25501 cacggaaacg ggatagttcg acatgtagtt tcatttgatt ttccttttct catttactaa
    25561 gtaatcttat tgctgtaatt aagctttctg gctgatggtg agagaatgtt tgtctgtgcg
    25621 aataatcctc aaaaattggt gatgcaatgt tgtcaaaaga taggacaggt ttttgattgg
    25681 taataacgtg ctccaacagc tcatttaatt tggtcccatg attgatatca aggtagatat
    25741 cgcaattctt tatcatatct tctaagatgt aaccaataac acgtggatgg agaaaaacat
    25801 tctctttgct agataattgt ttcagattct cggccatatc agtaaaagcg gcaatatgaa
    25861 attgataatc tggaaggtga tcaatgagat aggtcacatt ttgcaacaaa tgagtatttg
    25921 taatgacgag tagttgcccc ctaaaagatt ttttttgagt aggggtgtac aaaacgcgcc
    25981 atttttccag aatttctgac cattccaaca agtggtattt ccaccatatc tcacgtagtc
    26041 gtccagaaga atatgtattc caaggcttat ctgcagagac atagtgcaaa atcagtggta
    26101 gaggatctag cttgtcttga aatagatgtc ggtgtccata atggaaagca ccgcgatcgt
    26161 aacctatttg aaaattataa gtatcatcta gccgtaggta gcgttgtcct aatagacgat
    26221 ttaaaatggt ttggtcgccc tcgggaacat ttttgaagtc acgattggtt aaatcaatta
    26281 gttgtttctg tatattttct tgtttccagc gtttattatt gatcagcatg acaccagcat
    26341 tgaatccgat tccgtatcca aatgcagcac gtgaggcagc aagataataa ttttggatat
    26401 ccttctcgaa aaactcggtc aaatcacttg tgacaaccaa atcactatca aggtataaaa
    26461 ccttatcttc tttgacaaat tgaggaatat agtagcgagc gaaggtcata tggttaatat
    26521 gatgcagatt agaatgcaca gtccaactat tattgaatcc aatatctaat aattttacat
    26581 ctattaactc actcccaatt tgctggagga gacattgata gtgggaaaac cattcttttg
    26641 ggatgtcttg attaaatata taaattttca gatgacagtt atggtaaagt agtgatttta
    26701 gcgttgtttc aatttggcga atatagctat aatcacctgc taatacaatt gcttgaaggg
    26761 gtgtaagagt attcagttca cttgtaccgt aatgttcgac cattggagtc tctcctacat
    26821 tgttattatt tcccacttct ctccctattc cagaagtcgg taacggctcc tttagaggca
    26881 gaggatacag tgtgggcgta tttgccgaga acgccacgag agtagagtgg tggaataaca
    26941 gttgttttct tgcgttcttc gatttcttgg tcagaaacgt gcatggtgat ttctttggta
    27001 tcttgatcaa ccgtcaccaa atcacctgta cggaggtagg caattggacc gccatcctga
    27061 gcttcaggtg cgatgtgtcc aacaaccagt ccataggtac caccagagaa acgaccgtct
    27121 gttagaaggg ctaccttgtc accttggcct tttccgacaa tcatagaaga aagggacagc
    27181 atttcaggca taccaggacc gccttttggt ccaacatagc ggacaacgac tacatcgcca
    27241 tctacgattt cgtcagtcaa gactgcttcg attgcctctt cttctgagtc aaagaccttg
    27301 gctggacctg tatggttgcg gactttcaca ccagaaacct tggcaacggc accttcagga
    27361 gcaaggttac ctttgaggat gatgagtggg ccatctgcgc gttttggatt ttcaagtggc
    27421 atgatgacat cttgacctgg agtcaagtct gcaaaattct ctaggttttc agcaacggtt
    27481 ttacctgtac atgtgatgcg gtcgccatga aggaagccgt ttttgagcaa gtatttcata
    27541 accgcaggga caccaccgac attatagagg tcttggaaaa catatttacc agatggtttt
    27601 aggtcagcta agtgaggtac tcgttcttgg aaatcattga aatcttccaa ggtcaagtca
    27661 acgttggcag cgtgagcaat ggccagcaag tgaagagtag cgttggttga gccgcccagt
    27721 gccattgtga ctgtaatagc atcttcaaag gcttcacgag tcataatgtc agatggtttg
    27781 atgccaagtt ctagcatgcg tacaacagca cgaccagctt cttcaatatc agccttcttc
    27841 tccgaagatt cagcagggtg agaagaagag ccaggaatag acatgcccat gacctcaatg
    27901 gcagtagcca tggtattggc agtgtacata ccaccgcaac caccaggtcc aggacaggca
    27961 ttacactcaa tctggcgaac ttcttcagca gtcaagtcac cgttgttcca ttttccgatt
    28021 ccttcaaaaa cggataccaa gtcgatgtct ttaccattga gattacctgg cgcaatggtt
    28081 ccgccgtagg caaatacggc aggaatgtcc atattggcga tggcaatcat ggaaccaggc
    28141 atgtttttat cacagccacc gattgcgaca aaggcatcca cgttgtgtcc tcccatagct
    28201 gcctcaatag aatctgcaat gatatcacgt gaagtcaagg agaagcgcat accaggagtt
    28261 cccatggcaa tcccgtctgc aacggtaata gtaccgtatt gaacaggcca ggcacctgca
    28321 tcttttaccc cttctttggc taattttcca aagtcatgaa ggtggatgtt acagggtgtg
    28381 ttttcagccc atgtcgaaat gactccgacg attggttttt caaagctatc atcggtcatg
    28441 cctgtggcac gcaacatagc acggttgggc gatttgacca tcgaatcgta aacagagctg
    28501 cgatgtcgaa agtctttaag tttgtttgta tcggtcataa ttttcttctc cctatcttat
    28561 tttacccatt atatcataga tatgaaagaa acgataaaag atttgataaa taattggaaa
    28621 tttccgaatt tttcgacaat ttattctaca gtaaaaggca cctaagaatg ttaagtgccc
    28681 ttacaattta tttgtagatt aagtggtcgt ttttcgacga ttgtttgcgg atggattgat
    28741 gaaaagactg actaaagata gaactaggaa ggctgcgccg atgtaccaat aaggctgatc
    28801 taaggtagtt gaacgtccag ataggttgat aatgcctcgg agaagacaac cagctgtaat
    28861 agttgcaacg ccagaattcc acaaattata agagagacgt gaaagggtag ggataagttg
    28921 cagcagaccg agtagcacag ctccgcctat taatggtata cagaacatat aatgcataaa
    28981 gacagagact tcgccatagc tgagactttc atagattcga ctgaaaataa acaggaaagc
    29041 tgttattgct aagtaggaga taaatgttct tgaaactctt gtagttgaat tagtaaccga
    29101 tgtagacaat gtcactcacc gccctttctg agatagtatt tccatttgtt gttgggttgt
    29161 taataacttg accgttaaag taaagagtag atgaaccacc gccatcaagg ttgtaggcag
    29221 tttgagcacc atattgtttc ataacttctg ccaattgata gagagagagt ccttggcttt
    29281 cagacgtacg tccatctgct acgacgatga tataatgatt ttcatcgata atcccgatag
    29341 cagaacgagg gttggatgac attgcacgtc cgacttctgt tgaagtatcg acgacaattt
    29401 cgccgttttc gaccaatgat ggaccaaatg ctaagaggtt gacaacgccc ttgtcaatca
    29461 attcttgggc ggtaatctca ttttcataaa tgacctcaaa tgagccatct gcgtagatgg
    29521 ccaagtcgcc ataagctgca ttgtcccgaa cagtgtctcg atacagaact ccattcttaa
    29581 taacataacc agttgagtta gctccgtagt aatcaccgtt aacagctaga atggcattgt
    29641 ttgctgccgc agtttcagaa gttttagctg ttacgtttgt accgtaagtg ttttgtgcaa
    29701 gtgctgtttt taaatactcg ggtgagctga cttgaatatc tgcgacgtaa acagttgtgt
    29761 tattggtagt aatcgtctct aaatttatct gaatattatc atcagagtaa ctagtatcag
    29821 tagtagatac attggttgct gttgtggcag tggtggaaga cgaagctgtg gtcgtattct
    29881 gaacgctcgt agaagtagca ttgcttgctg agacggttgt tatcgcttca gaaatgacga
    29941 aggtttttaa catggagtaa gtaaagcctc ctgtcaaaag cattccgaag atggatgcgt
    30001 aggcaaaggg ttttttaagc aatttcatgg gaaaatgatt tcctttcttt aaaaataata
    30061 ttcttttgaa caaaccaaga agctaggaaa aggaagatac caactgcaag tttgacaatg
    30121 tagaggttga gttctagaat ttggtggaag agatagagga gggctgtatc gcaaaggaag
    30181 aggacaaagg ctagtgtaaa gtagcctgcg cctgttcgtg cgatgctctc ttcattgtta
    30241 aagactaatt tcttattaag tgtaaaatta caggtagcgc tacaaatgcg agcaatcgtg
    30301 tttgcgacca ataaacgtac agcagttggt aagctagtga gtagcaataa ggcaagtgca
    30361 tatactccgt agtcaactag aaatccacca aaagatgcca gggcaaattt gaagagattt
    30421 ttgtaaatga gcagtccatc ttttatggga cgaaaatgcg aactggcatt atcatcgata
    30481 taaatggttt ggattgggac ttccgtaatt ttatagcgtt gacttgcctg agttaacatg
    30541 ttcatctcgt actcatagcg atcgccttca atatctaaca tgaatggaat taagtcagta
    30601 tggaatccac gcaagcctgt ttgtgtgtcg gacacactga caccagtttg cagtctaaac
    30661 aatactctgg ttagtttgtt accaaaacga ttccgaaagg gaatgtcttt ggtaaattga
    30721 cgaacaccaa gaatcaggcg acttggcaga ttcatagctg cacgtgcgat gcggtcaata
    30781 tcattcacag cgtgttgacc atctgcgtca gcagttacga taacacctgg ttttctcaaa
    30841 tcttggatga aactaaaggc tgttcgcaag gcttggcctt ttcctttatt gacatcatgg
    30901 tgtagaacaa ttgcataggt tttggcgatt tcaagaatat ttttgaatgc gccagtacta
    30961 ccatcatcca caacgatgac ctgacaattt agcctgtttt tcattatttc taatagttgg
    31021 attaattttt catctggctg gtaagccggt atcactacat aatacatatc ctaaacctca
    31081 tttatttttc ttgttgggac tactatactg aagttttcta aaagcaagct aaaaccaagc
    31141 cagtcaaggg attttcttaa gttttgctta agaaaatgtt aggaaatagt taagaaaacg
    31201 aacaaatgta ggaattttca gaaaattcct tgacattcta cttccttgtg atattatagt
    31261 agataacaaa tttgcagaga ggaggaatat tcgtgcaaga aattcaacta gaccaaccgc
    31321 gttcggggtc ctatcttatt ttggacaccc tgcatcagct aggagtagac cttgtttttg
    31381 gttaccctgg tggggcagtt ttgcctctat atgatgctat ctatcaatat gagggaatcc
    31441 agcatatttt ggctcgtcat gaacaaggag cggtccacga ggccgaagga tacgctaaat
    31501 catcaggaaa ggtgggcgta gccattgtaa cctctgggcc aggagctacc aatgccatta
    31561 ctggaattgc ggacgcaatg ggtgatagtg ttcctctttt agtttttact ggtcaagtcg
    31621 caacacgtgg tatcggtaaa gatgcttttc aggaagctga tgtcctaggg atgacaatgc
    31681 cgattaccaa gtacaattac caaattcggg atacggcaga tattcctaga gtcatcacag
    31741 aagctctcca tattgcaaca acagggagac cgggtcccgt tgttattgat gttccaaaag
    31801 acatccaaga aagagttgtt gatttttatc atgacccaac tctacaccta ccaagttatc
    31861 agccaacgat tgaaccaaat ggtttgcagg ttaagaaaat tttgaaacag cttagccaag
    31921 ctcaaaaacc agttatattg gctggtggtg gtgtcaatta tgcagatgcc aataaagaat
    31981 tagttgcctt tgcagagcgc taccgcattc cagtagtttc aaccctcctt ggattaggtg
    32041 caatgcccat tgagcatgaa ttatccttgg ctatgggggg gatgcacggt tcatacgctg
    32101 ccaatatggc tatggatcag gctgattaca ttatcaatat tggagcgcga ttcgatgacc
    32161 gcctaacagg aaatccaaca acctatgcgc caaatgcgac ggtagcacat attgatattg
    32221 atcccgcaga aattggtaaa gttgtcaaaa cggctattcc agtagtgggc gacgctaagg
    32281 caaccttgaa agctctactt gctttagaaa cagtcgaaac aggctatgct gattggacgg
    32341 cacaagtatt ggaaaacaaa cgtcgggcgc cattttggta tgatgaagat gaaaaggtta
    32401 ttaagccaca ggcggcaatt gaattaattg gtcagttgac gcaaggggat gccattgtcg
    32461 taacagatgt tggtcagcat caaatgtggg ctgcccaatt ctacccctac aaacatgcac
    32521 gtcaacttgt aacatctggt ggcatgggga ccatgggctt tggtattcct gcagctatcg
    32581 gcgccaaatt agccaatcca gataaagaag taatcatctt tgtcggtgat ggtggcttcc
    32641 aaatgaccaa ccaagaattg gctattttga atggctatgg tgtaccgatt aaggttgtat
    32701 tgatcaataa ccactctctt ggaatggttc gtcaatggca ggaatccttc tatgaaaagc
    32761 gtcgtagcca atctgtcttt gacgatgaac cgaatttcca attgttggcg gaggcctacg
    32821 gaattagtca ttatagtttt gacaatccag tgactctaag tgaagatatg aaagttatct
    32881 tagaagataa accaatgctc atagaggttc atatttctaa tcgtgaacat gttcaaccga
    32941 tggtgccagc aggtaagagc aatgcagaaa tgttgggggt gaagttcaat gcgtagaatg
    33001 ttaacagcta aattgcgaaa ttcatctggt gttctgaatc gttttacagg tgtcctatct
    33061 cgtcgccaaa tcaatattga gtccatctcc gtcggcccaa cagaagtaga tggtatctca
    33121 cgtgtgacgg tgattgtaga cgtggccagt cacgatgagg tcgaacaaat catcaaacag
    33181 ctaaaccgct tgattgatgt ggtccgtgtc cgtgatttga cggacattcc ccacttagag
    33241 cgtgaggtga ttcttgttaa aatttcagct ccgccaacaa aacgagcaga aattttagcg
    33301 attatccaac cctttagagc aaatgttgtc gatgtggcac cgcactccat taccattcaa
    33361 atgacaggtg atggagataa gattgacgcc ctcctgcgtg tgattcagcc ttatggcatc
    33421 aagaatatcg caagaacggg tgcgactggc tttagtagag actaatcctt ttcgataata
    33481 aaacctatcc tgcgttgact tcgcttgatg aacgttagtt ctatcttcgc ctagtctagc
    33541 cttcattttc tttgaacatc caaaactaca aataaaaata gaaaagagaa aaaattatga
    33601 cagtaacaat gcaatatgaa aaagatgtaa cagtggcagc acttgacggt aaacgtatcg
    33661 ccgttatcgg ttatggttca caaggtcatg cccatgctca aaacttgcgt gatacaggac
    33721 acgatgtcat catcggtgtg cgtgcaggta agtcatttga caaggcaaaa gaagacggtt
    33781 ttgaaacttt tgaagtagca gaagcagcaa aacaagcaga tgttatcatg atcttggctc
    33841 cagacgaaat ccaagcagac ctttacaatg aagaaatcgc tccaaacttg gaagcgggca
    33901 atgctcttgg ttttgcccat ggtttcaacg ttcactttga atttatcaag gtaccagcag
    33961 atgtggatgt cttcatgtgt gcaccaaaag gtccaggtca cttggtccgc cgtacctttg
    34021 aagaaggttt tggagtacca gccctctatg cggtctacca agatgcaact ggcaatgcaa
    34081 aacatattgc gatggactgg gcaaaaggtg ttggttcagc ccgtgttggt cttttggaaa
    34141 caactttcaa agaagagaca gaagaagatt tgtttggtga gcaagctgtt ctctgcggtg
    34201 gtttgacagc ccttatgcag gcaggttttg aagtcttgac agaagctggt tatgcaccag
    34261 aattggctta tttcgaagtt ctccacgaga tgaaactcat cgttgacctt gtctacgaag
    34321 gtggctttaa gaaaatgcgc caatctattt caaacactgc tgaatttggt gactatgtat
    34381 caggtccacg cgtgattaca gaccaagtca aagaaaacat gaaggcagtc cttgcagata
    34441 ttcaatctgg taaatttgca aatgactttg taaatgacta taaagcaggc cgtccacgta
    34501 tggaagctta tcgtaaagaa gcagagaatc ttgaaatcga aaaagtaggt gcagaactcc
    34561 gcaaagcaat gccatttgtc ggacgcaatg atgacgacgc attcaaaatc tataattaaa
    34621 cacaatcatg gtagataggg ggatagtcag ctttactttg agtgatggca atacatttaa
    34681 ggtttgggtt ggcggatgag gggatgtcat tccctttttt cccctatctc tgaaaatgaa
    34741 taaaagagct ggttttttcc ggctcttttg cccatttcat tcatgaatac attaaaaaaa
    34801 taaaaaagtt cggtttttat aaaatgacat aataatagtt taaatactag gaatttctag
    34861 ggaatattga tacaataaat atagaaagaa attaatggaa ctatgattac agcaaaaaat
    34921 gtagaacaag catactccgt tcttaagcgc gtggtagtac gtaccccctt ggattatagt
    34981 cgatacttat cggaaaaata tggtgcaact atttatttaa aaagagaaaa tgaacagcgt
    35041 gttcgctctt ttaaaattcg aggagcctat tatgctattt cacaattgac agatgatgag
    35101 aagtcacgcg gagtggtctg tgcttcggcc ggaaaccacg ctcaaggtgt ggcctacacc
    35161 tgtcaggaaa tgcaaattcc tgctacgatt tttatgccca ttacaactcc gcaacaaaaa
    35221 atagggcagg ttaaattttt cggaggagac tacgtagaga ttcggctcgt aggtgatacc
    35281 ttcgatgagt cagccaaggc agcacaagat tatactcagg aaagtgggaa aacatttata
    35341 gacccattcg atgatgaaaa tgtacaggct ggtcagggaa cagtagccta tgaaatcttg
    35401 gaagaagcgg aagagcaaac cattagtttt gaccaaattt tagttcccat aggaggaggt
    35461 ggtctggttg caggcgtttc ggcctatctg aaagaacatg cacctgaaat taagattgtt
    35521 ggtgttgaag caagtggggc acggtcaatg aaagcggctt ttgataaagg tcgtccggtt
    35581 aaattagacc aaattgataa atttgctgac ggtattgcgg tacagaaagt cggtaagtcg
    35641 acctacgaag tggctcggaa atacgtagat cgcctgattg gtgtggatga aggatggatt
    35701 tccgggacta ttttagacct ctattctaag ctgggtattg ttgctgagcc agcaggagca
    35761 gcaacgattg cagctcttga ggtagtcaag gaccaaatca aggggcaaac catttgttgt
    35821 atcatttctg gtggtaataa cgacatcaac aggatgccgg aaatggagga acgtgcgctt
    35881 atctacgagg gaattaaaca ctactttgtt gttaattttc cacaacgtcc aggggctctt
    35941 cgtgaatttg taaatgatat tctagggaca aatgatgata ttactcgttt tgaatatatc
    36001 aaacgtgcca ataagggaac agggccggtt ctaatcggta ttgccctagg agataaaaca
    36061 gattatacgc agtttatttc tcgcttggaa gagtttgatc cccagtacat caatcttcat
    36121 gaaaatgatt cgctttataa aatgctagtt taggaggtca ttatggtact tggtccaatt
    36181 gtttttattg gcggtttctt gttcttcgta ctgattgctt tgattttgat tgcttcaggg
    36241 ctatacgttg tcaagcagca gacggtcgct attattgagc gctttgggaa ataccaaaaa
    36301 acatctactt caggtattaa ctttaaaata ccatttggag ttgatgtcat cgcagcccgc
    36361 attcaattgc ggatgttgca aagtgaaatt gtggtagaaa ccaagacgca ggataacgtt
    36421 tttgtcacaa tgaatgtggc aactcaatat cgagtaaatg aaaataatgt gacggatgcc
    36481 tattacaagc tcatgcaccc agaagcacag attaagtcct atattgaaga tgccctgcgt
    36541 tcatctgtgc ctaaattgac cctggatgag ctcttcgaga aaaaggatga gattgcactt
    36601 gaggtacaaa aacaagtagc agaagagatg tcaacctacg gttatgttat tgtcaaaacc
    36661 ttaattacca aggtagagcc agacgccgag gttaagcaat ctatgaatga aattaacgca
    36721 gctcagcgga aacgggttgc ggcccaagaa ttggcagaag ctgacaagat taaaattgtc
    36781 acagcagcag aagcagaagc tgaaaaggat cgcttgcatg gtgtaggtat tgcacaacaa
    36841 cgtaaggcga ttgtagatgg actggcagat tcgattcgtg aactgaaaga atcaaatgtt
    36901 agcctatctg aagagcagat tatgtctatc ttgctgacca accaatactt ggatactctc
    36961 aataattttg cacaaggagg taatcaaact atcttccttc cggggaatcc ggagggggtc
    37021 gaagacataa ggacgcaaat actatcatct cttagggcaa aatgatggta aaaaacgaac
    37081 attttacttg acaaaatagg ttaaaacata ttatactaaa ttgcacgaat aaaaaagaaa
    37141 ggggtttcta atgactagtt acgaaaaagt agccgctgtt gtcggctggg ttcgtgaaaa
    37201 gaaaatcaca ggttaccgta tcagtaagga aacaaatgct cgtgaaatgt cagttatcgc
    37261 tcttgcacaa ggtcgcgcta agattgacaa tatttcattt gcaactgcct tgggtttgat
    37321 tgatttttac gacaaaaacc acaagaaatt tgaaaactaa tctaaatggt ttcgtttaga
    37381 gatgtccaaa aagaggaatt ttacgaattc ctcttttttt agtctaaaaa aacttaccag
    37441 ctttgaaact ggtaagtaat agtcttctat ggaacagatt gagtttatcc aagaaaacgc
    37501 tgaaggaatt cacgtgtgcg ttcttcctgt ggattttcaa agatttgttg aggactgcct
    37561 tcttcggcga tgacgccctt atccataaag ataacgcggt cagatacgtc acgggcaaat
    37621 tccatttcgt gagttacgat aagcatcgtc aatcctgatt ttgccaaatc ttgcatggtt
    37681 ttgagaactt ccccaaccat ctctggatcg agagcagaag tcggctcatc aaagaggata
    37741 acttctgggt caacagatag ggcacgtgca atggccacac gttgtttctg tccaccagag
    37801 agttgacttg gtttggcttg ccagtactgt tcggtcatgc caaccttgtt gaggttttcc
    37861 ttggcgattt tctctgcctc agctcgatct cgcttcagta ccgtagtttg tgctacaatg
    37921 gcattttcca atacatttag attgttgaaa aggttgaagg attggaatac catacctagt
    37981 ttttcacggt aagtcgtcaa atcgtatcct ttagccaaaa catcttgtcc gtggtacaga
    38041 atctgtcctt ctgttggtgt ttccaaaagg ttgatagatc ggaggaaggt tgattttccc
    38101 gaaccagatg aaccgatgat tgagataacc tcgccctttt caacgctaat agagatgtct
    38161 ttgaggactt gattttgtcc atatgatttc tttatatttt tgatttcaag aattacattt
    38221 ttagtcatgt ggcacctcga cttgcatttg gtttgcacct gttgtgtatg tatctgtatc
    38281 aaaatgcttt tcaactgcgc gtaagatacg tgtcacagta aaggttagga tgaagtagat
    38341 aatagcaata accgtaaagg tttggaaata ttgataggtt tgggttgcga cagtatttcc
    38401 tgagaaatag agttcaacaa ctgagataac gttcaataca gaagtatctt tgatattgat
    38461 gacaaattca ttaccagtcg ctggtaagat gttacgaata acctgtggaa ggacaatctt
    38521 acgcatggtc tgattatgag taaatccgag agcagtagca gcttcaaatt ggcctttatc
    38581 gacggcaaag ataccaccgc ggacaatctc actcatgtag gcacctgtgt tgatggatac
    38641 aatgaagata gcggcaagtg tgcggtcaag attgagcccg aatgcttggg cggtaccata
    38701 gtaaataacc atggattgta caatcatcgg cgtaccacgg aaaatttcga tgtagatatt
    38761 gataatccaa ccgagcactt tttgaccaat agcaagcgcc ttgtttgctg cttttggagc
    38821 tgtacggaag acaccgatga ggagaccgat agcagtaccg ataattgtac cgaggatgga
    38881 aatgagtaat gtcatcccag ttccgcgcag aagttgttgc cagttgttaa caacaatatt
    38941 ccaaacttgg gcgaagaaac taggtgtttc gccctcgctg gcttcttcaa cgggctggtt
    39001 ttcaatcata tcatccataa gtgcgatttg ctcttcttct gaaatagttg ctaagacttt
    39061 gttgacctga gcgatacgct cgtcatcttt gcgcataccg acagcaatgg tcacgtcttc
    39121 ggcattggtt tcaaaactgt ctgccaattc aaccattttg aaagctttat ttgcagcttc
    39181 tgctgtacga ccttctggac gttcagaaac ataggcgtct ataatgccag attctaaagc
    39241 ttgacggatt tgtgagaaat ctcccatggc agtctgtttg ttagcccctt caatttggtc
    39301 aatcaaatca tagaggtaaa ccccttgctg ggcagtgatt tttgcgccag caaaatctgc
    39361 caagctggtt gcgtttgcgt actgactatc agaacgaaca accagggtag gaattgaagt
    39421 gtagtagcta tctgagaagg cgatttcttt cttgcgttct tctgtcgggc tcataccggc
    39481 gataatcata tcgattttac cagatgtaag agcagggact aagccttccc acttggtttt
    39541 aacaaccaag agttctttgt ccatggatgc agcgattttt tttgcaacct gaacatcata
    39601 tccgttggca aattgattgg ttccctcaat aggaacggca ccgttgctat catcttcttg
    39661 ggtccagtta aatggtgcat aggctgcttc cataccgacc cgcaggtatt cgtctgcccg
    39721 aacccctgtt gttacagaaa aaacagcgat tagggtcagc agaaatatac tgagtttacg
    39781 tttcataatg tctcctttaa aatgctatta caccatttta ttaaaaattc tgacaaattt
    39841 caatatcctt gtact
//
LOCUS       DBNFCX010000008        39245 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.008, whole genome shotgun sequence.
ACCESSION   DBNFCX010000008 DBNFCX010000000
VERSION     DBNFCX010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 39245)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39245)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39245
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.008"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            36..410
                     /locus_tag="AC1PJC_000295"
     CDS             36..410
                     /locus_tag="AC1PJC_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIP6619338.1"
                     /translation="MAWKFDNNIPIYIQISNTIKLQIVTNQLKSGDKLPTVRDLAEIA
                     GVNPNTVQRALSDLETEGFVYSVRTTGRFVTDKQELITQTRLHLAQKELENFVNNMLD
                     LGFKHDDLTGQLDDYLKGVTYE"
     gene            403..1110
                     /locus_tag="AC1PJC_000296"
     CDS             403..1110
                     /locus_tag="AC1PJC_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6619339.1"
                     /translation="MNNAYTLVELQQVSKSYGGAVALNNVNLKLTAGKIIGLLGPNGS
                     GKTTMIKLINGLLQPEYGQVLINGRTPSPETKAIVSYLPDTTYLDEHMKVLEAITFFE
                     DFYADFDKERALHLLQDLGIDLNSRMKHLSKGNKEKVQLILVMSRQAQLYVLDEPIGG
                     VDPAARDYILKTIVNNYSPTASVIISTHLISDVEQILDEVIFLHYGSVIRHGNVDDLR
                     IESGESIDELFRQDFKA"
     gene            1127..1909
                     /locus_tag="AC1PJC_000297"
     CDS             1127..1909
                     /locus_tag="AC1PJC_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIP6619340.1"
                     /translation="MFKKLLKYEFQSVGKWYLGIYAGALALSAILGFWLQALTLRAQA
                     GTTEPGGAEMVLFGTSFMTFGILIAALGLSTFFMVINRFRKNVYGRQGYLTMTLPVSS
                     HQIILSKLLASIVWYILAGITCLLSIGIILAVILVASEEAIMPEIQTFVQAIDWTVLF
                     SQIVYYLIEITTGILLIYFSISIGQLFKDHRFLFAILTYIGILIVTGVFGTFFVLSNL
                     ETAYSTPFSLYPSPVLALVNIILAFAYYFGTHFIMTKKLNLQ"
     gene            complement(1953..2954)
                     /gene="add"
                     /locus_tag="AC1PJC_000298"
     CDS             complement(1953..2954)
                     /gene="add"
                     /locus_tag="AC1PJC_000298"
                     /EC_number="3.5.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004000 - adenosine deaminase activity
                     [Evidence IEA];
                     GO_function: GO:0019239 - deaminase activity [Evidence
                     IEA];
                     GO_process: GO:0043101 - purine-containing compound
                     salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine deaminase"
                     /protein_id="HIP6619341.1"
                     /translation="MLNVNELVKTELHCHLDGSLSLGVIRQLAQMAKITIPAEDEALR
                     KLVSVHGKVDSLMAYLKLFDFVRPLLQTATALELAAYDLVRQAASDKVIYIEVRFAPE
                     LSTDQDLTILEAVSAVLVGLNRGQEDFGVVAKLLVCGLKQTNTNQTKELFSAIADLAP
                     KGLVGFDFAGNEADYPTEELRDIIQFTQSLGYPMTFHAGECGCVTNVIQALELGIRRI
                     GHGTALTRNPEAIQAFVNSGATLEMCLTSNLQTGAADSIEYFPYRELVEAGANITINT
                     DNRTVSNTTLNREYQLFVEYFGTSKADFYRFNQNAIQASFASEEEKQVLLELLDQQY"
     gene            complement(3111..3198)
                     /locus_tag="AC1PJC_000299"
     tRNA            complement(3111..3198)
                     /locus_tag="AC1PJC_000299"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3162..3164),aa:Ser,seq:gga)
     gene            complement(3737..4474)
                     /locus_tag="AC1PJC_000300"
     CDS             complement(3737..4474)
                     /locus_tag="AC1PJC_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PlySs2 family phage lysin"
                     /protein_id="HIP6619342.1"
                     /translation="MTTVNEALNNVRAQVGSGISVGNGECYALASWYERMISPDATVG
                     LGAGVGWVSGAIGDTISAKNIGSAYNWQANGWAVSTSGAFKTGQIVTLGATPGNPYGH
                     VVIVEAVDGDRLTILEQNYGGKRYPIRNYYSAASYRQQVVHYITPPGTVAQTAPNLTG
                     VRTYRETGTMTVTVDAINVRRAPNTSGQIVATYKKGQSVKYDEVVVDVDGFVWISYVG
                     GSGKRNYVATGPTKDGKRYGPAWGTFK"
     gene            complement(4565..4801)
                     /locus_tag="AC1PJC_000301"
     CDS             complement(4565..4801)
                     /locus_tag="AC1PJC_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014334650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140911 - pore-forming activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin"
                     /protein_id="HIP6619343.1"
                     /translation="MQKINWKLRFKNKATLAAILATLLLLIQQLGFKLPDNVSDVVNT
                     ALTLLVLTGVITDPTTAGIEDSVQALTYRTPKVD"
     gene            complement(4803..5081)
                     /locus_tag="AC1PJC_000302"
     CDS             complement(4803..5081)
                     /locus_tag="AC1PJC_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015990885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF7365 family protein"
                     /protein_id="HIP6619344.1"
                     /translation="MHIKPEHVYALVGFVSTVVGLWTNFSAKITKQENRITILEKDIE
                     NLKEFKESANRRLDNHDEQNKAILVLAEQVKSLGDDVRELKRVILKEN"
     gene            complement(5085..5252)
                     /locus_tag="AC1PJC_000303"
     CDS             complement(5085..5252)
                     /locus_tag="AC1PJC_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018368764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CD1375 family protein"
                     /protein_id="HIP6619345.1"
                     /translation="MMVMLMAMNIVDEHFDFAFKDVPRIFKKKVKAQLELMGHPELAD
                     ENVVNYIPKGE"
     gene            complement(5257..5796)
                     /locus_tag="AC1PJC_000304"
     CDS             complement(5257..5796)
                     /locus_tag="AC1PJC_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018379493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1366 domain-containing protein"
                     /protein_id="HIP6619346.1"
                     /translation="MRAWKVVGKYPFYSDGEITHTEIAIASTTGSYATYTEKVVGNHM
                     DKTETELVELAREAHFKSEYADRAMAESVQKIEEMEAVVKSAKRFMAESAEKFEAMQS
                     VQEDLIERLSKTEEERNIRFQAVEDKFRILNGSVMEMLTEFYTSFEEGEVPEDESIEN
                     VDTVDGSDNSTANTDTETE"
     gene            complement(5793..5996)
                     /locus_tag="AC1PJC_000305"
     CDS             complement(5793..5996)
                     /locus_tag="AC1PJC_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619347.1"
                     /translation="MNQEQITQALRLTNNDLVAKLSEEMTTKNFLAVQLTEAQQTIAG
                     LQAQVAELTKQLDEATKPEEVSE"
     gene            complement(6009..11210)
                     /locus_tag="AC1PJC_000306"
     CDS             complement(6009..11210)
                     /locus_tag="AC1PJC_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016032 - viral process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail spike protein"
                     /protein_id="HIP6619348.1"
                     /translation="MIYLKDGNIPLNLAYDDDIVQEANSTYQLSFKFPLTDGKWNLLK
                     REVFLLADDLHGEQEFFIFEVKKVNGHVQVYAKQVATLLNYYSINSISVDRVPGQTAM
                     TALASSIKRNCPFTFFSDIMDRHTFNESNVSVMDALVKDKHSIVGQWGGDLVRDKYQV
                     KLLKNGGIENESLFMYKKNLSSYEESENINNLKTRLHLKKTIQGQSEGEADRVIAVTV
                     DSPLIGQYRQIYEADIEVNDQDVTDVASLTAYGKRYFSSTLCDLVENSINLDVKGKSD
                     VSVKMFDTVSVFHEQFDVDLRLKITSYHFGPMSKRLKSIGFGKVSQSVKSTVASMVAG
                     SVDKATNTLSASFEQKLQKEIDNANRHFDAEFEKRAEEINDGIEQSKAEAERYADAIK
                     QEIDTEIAQVEQSMQAQSEEHDRQVTDILSKTQSVESLANQAKTDAASAITTALQSKD
                     EAIADARAQVATVSQALNTAKAELQAAIASADRKARDSQASATALRNDLNSQANKILA
                     QAQAQTALTNRVTTVETLADGTKTTVAELSKTVNKATGDIASVTSRTKTVEDTLSQTR
                     AKYEALTQTVNAQTGQIDSINRKTADLQSGIDGVRERFENLRVGAANYIQDFGFAKNQ
                     NFYNNQSLWRFERIEDSTARSGYHIKATCTQAGGGGFHRVFVDLRGAEWQGRTMTYAV
                     DIKASKSVRMFLGVEAFNNGSRTFDVTTSWQRFVSTDTVNSKRWYSFQFYADTITWAV
                     GDIIYIRDPQLEDGTIATTPHASEEDFRSEFNTYVRNATENSAELVRRIETADGKAVE
                     AKTYAQQTATAINTRLESLETYKDAEGTRAEQYLSASRTETAKQLTAERTAIANNYVA
                     KSIYDENVRGTTLKLNEIKSTADAAKQNLATYQETVDRKLTELTSSTQTLDGKINTAS
                     AKVDTVAGQIWTELTRVEGKIPSDLGGRNYILKSDVYATSGSRYFDTSPEFIDYAYSG
                     KYVTISLDIKGENLVPDSRGLSRIGCEVRLNLSDGKVLYLQCQKIVSGTQPRERISVT
                     RKIPEGVSVVSANKVNMYVQVGGTALAGRPKIELSSIPTDWSPAPEDINSELSSTKTL
                     ITQTAEGQTQLSNRLTTTQDKVSTAETKISQLISDVSSKVSQTDYNTLTGRVDSAETA
                     ITQNAQEISKRLTNTQVESAITSKGYQTKSDVDSNITGRGYITSSALQPYALATTVQN
                     LVRETADSFSRTISETKSMIPTEVGGRNYLLNSKTEISGGWGKKTISLSPELLGNLNK
                     IKSVTISCDVEGTNVATRDSRKRYGLACSVEINGIVNYWEVWQAEDTIKKRISQTFTV
                     PEGKSITKFYSPALWIQADGDIKVSNPKIEFGVLPTDWSPAPEDLATVTALHAVNDTV
                     DSHTRTIGAVGTAGSILDNVSKVTQTAAGLVQEVSGTNGLKTQVSTLAGSYAIKNLTK
                     AGDVLGQINLNKDGSVKIDGSLVQITGKTYIQDGVITSAKISSLDAGKITTGTLDAAR
                     IAVNSIDGSKMVFDQAFVNKMTANEAYLKQIFAKNAFITQVQAVTLSASKISGGILSA
                     TNGAMDVNLNDGQILCYTDQAAMKRILSGYPTQFIKFDTGIYGGKPGGVTVIGSNRDG
                     SENPNNGSFAGIRIWNGIQSDGSFFDKMDIGADDVQIGHKVFDDGNGTYRGWQFKSFG
                     DGSAVSLFPYGNYGRATITATNYRIFNPANNTYVNLEEVLNKIFDNFNNLNNNGNYQR
                     SFYSSWR"
     gene            complement(11207..11902)
                     /locus_tag="AC1PJC_000307"
     CDS             complement(11207..11902)
                     /locus_tag="AC1PJC_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HIP6619349.1"
                     /translation="MDYMIINDLNTSTLADCHVLDFGKAQASIERSEQVEVFGANGQL
                     HVSEGAYDGYNRTFIITLRHLSDAMRLIEIFQPDNNIVEFGYLRDSLFYCDLVSSCYI
                     PLGPHRWKVEITVSMHPFRYVKNPSDVVLTSSGSVQNPGTVYSEPIIIIEGSGRVTLT
                     IGQQLMELELDTRATIDCRHKRQNIYDKNGAVKNTIRKRGPFFEIPVGRSGIVTSGTV
                     TKITIKGNWRYKV"
     gene            complement(11902..14484)
                     /locus_tag="AC1PJC_000308"
     CDS             complement(11902..14484)
                     /locus_tag="AC1PJC_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_process: GO:0098003 - viral tail assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HIP6619350.1"
                     /translation="MATDLGSAYVQIVPSAKGISGSISKLLGGEVDSAGRTAGSSLGA
                     SLVSALSGALAAAGIGKIIGSALSAGADLQQSFGGLDTIYDGAQASAKRFASQAYKAG
                     ISANTYAEQAVSMGASLKQALGGDSTKAINMANVAIMDMTDNAAKMGTDIGVIQQTYQ
                     SLARGNYAMLDNLKLGFGGTKAEMERLLTTAEGLPSAMGRKFDISNYADVVEAIHLVQ
                     ESMGLSGVAAAEAQNTYYGSLAAMKAATSNFLADLSLGEDIEPSLVALMETTSTFLFG
                     NLLPMVQRVFKGLPTMLGILLSEGISRVFGSEVSGKVMGELNKLGEIILTFYDMTFGS
                     LSAKDNIDMLTKVGFDPETAAKITSVSGQIGSVITSFYDMIFGSLSAKDNIDFMAQMG
                     VSEGTATTIVNFANTIRTGFEGVWSTLQTLFGQVPGFFSTISGSVGPIITTIMDGISR
                     MDFSGIQNLVTAILPAVQAGFQTFMSIVSPAIDSVVQSFVSMWNAAQPLISILSGALM
                     PVLQILGSFLGGVLKGVLSGVSFAFDALKVAIEFLTPVVDFLVQALNFVQPVLSTIAE
                     WIGVAIGMFGNLGTAGQGLSAFIKSAWTNIQSAIQTAGNIIRTVIDWIKLAFSGAGNA
                     VGVLKNVFSLAWMGIQDAIQVAKGIIDGVISGIKGAFTSFQSVVSSVGSAVGGIISNI
                     TSTITGLANIDISGAGAAIMEGFLGGLKSAWGAVTDFVGGIASWIAKNKGPISYDRVL
                     LKPAGLAIMQGLNTNLQVGFKDVMGTVSGMAGAIAKPFENQSLAYDMTSSASVDVRRN
                     LLSSTGDLAVSDGGSSLSARLANIERFLSALVDKELAVYLDGEKLAQNSYMHQGAIMA
                     REGI"
     gene            complement(14474..14857)
                     /locus_tag="AC1PJC_000309"
     CDS             complement(14474..14857)
                     /locus_tag="AC1PJC_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5361 domain-containing protein"
                     /protein_id="HIP6619351.1"
                     /translation="MIAADEEALICDLAETYGVYDYRQLPLSRVAVFACGLSEKSRIK
                     KILSGQKEDLDTLLLAGIYDTVRLLFWAKTKDGQAGRNRPNSVAQALEGSKVEREERV
                     FSSGEDFERAMRALEIEIGGEERGD"
     gene            complement(14854..15132)
                     /locus_tag="AC1PJC_000310"
     CDS             complement(14854..15132)
                     /locus_tag="AC1PJC_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619352.1"
                     /translation="MFEVKTSTGLVLSIDQDRLENYELFEAIAAEESGDSGAMIRIVN
                     LLLGDEAKKLKDHVRTEKGLVPISALGAEIKDVFEQVKDLKNSQSSPE"
     gene            complement(15143..15730)
                     /locus_tag="AC1PJC_000311"
     CDS             complement(15143..15730)
                     /locus_tag="AC1PJC_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HIP6619353.1"
                     /translation="MADAKLVSSAKPDIAGAISSAPTGTSLPTNATTKLNTAFKNLGY
                     ISEDGLTNEDTRESEELKAWGGDVVDTPQTGKSDKFTYTLIEVLNVDVLKEVYGPENV
                     KGDLESGITVEVNSKELPTHPLVVDMLLKNGAKKRIVIPNAKVLEVGEITYADSDLAG
                     YETTIQALPDSKGNTHYEYIKGASESTGTSSPSSS"
     gene            complement(15745..16080)
                     /locus_tag="AC1PJC_000312"
     CDS             complement(15745..16080)
                     /locus_tag="AC1PJC_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000573598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619354.1"
                     /translation="MIEIICLNFLSAHLPVPVYTEHEEEMPDSFVVFEKTSGGKKNHL
                     NQATLAIQSYGQSLEEAAFLNEEVKQAVEKMVELPTISRVELNSDYNFTDTETKRYRY
                     QAVVDFIYY"
     gene            complement(16077..16316)
                     /locus_tag="AC1PJC_000313"
     CDS             complement(16077..16316)
                     /locus_tag="AC1PJC_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619355.1"
                     /translation="MARMKFKLNRAGVRELLKSPEMQAVLTDKANAIRNRAGNGYESD
                     IYVGKTRANAMVYADSIKAKRDNKKHNTLLKAVKS"
     gene            complement(16309..16647)
                     /locus_tag="AC1PJC_000314"
     CDS             complement(16309..16647)
                     /locus_tag="AC1PJC_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016628297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619356.1"
                     /translation="MTKIKGVPVVLIDKQVIGNDSFGHPKTADVEIVVENVLIAPAST
                     EDITNQINLTGKKVEYTLAIPKGDTNQWENREVCFFGQRWRTIGLPLEGLEHLIPLDW
                     NKKVMVERYG"
     gene            complement(16640..17047)
                     /locus_tag="AC1PJC_000315"
     CDS             complement(16640..17047)
                     /locus_tag="AC1PJC_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001863073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage Gp19/Gp15/Gp42 family protein"
                     /protein_id="HIP6619357.1"
                     /translation="MEETELKNLAALDDLELLWRQLKFDEKERAKALLEVVSNSLRVE
                     AEKFGKDLDQMVADNPAYASVVKSVVVDVVARTLMTSTDQEPMTSVTESALGYSFSGS
                     YLVPGGGLFIKDSELKRLGLVKKQRFGVIELYD"
     gene            complement(17143..17352)
                     /locus_tag="AC1PJC_000316"
     CDS             complement(17143..17352)
                     /locus_tag="AC1PJC_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002991583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HeH/LEM domain-containing protein"
                     /protein_id="HIP6619358.1"
                     /translation="MEYKDKKTGQIIVTDSLLSGDWEPIQRDSKEKTPSSDELKSLLT
                     ELGVEFNPKAKKAELLELYEANKPD"
     gene            complement(17363..18253)
                     /locus_tag="AC1PJC_000317"
     CDS             complement(17363..18253)
                     /locus_tag="AC1PJC_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010050507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HIP6619359.1"
                     /translation="MSSFNTGTLFSPELVTDLISKVQGASVLAKLSNQTPIPFAGIEQ
                     FVFNLEGNAQIVGEGEQKKAGEATLSSKVIKPLKFVYQARITEEFKNASEEKQIAYLQ
                     AFNDGFAKIIAKSFDIAAIHGLEPKSMTDASFKAENSFDGLITGNVVTFNAGTIDEDI
                     DAAVAQVTSKGGEVTGLALSPVAGQALAKIKVNGVAQYPEFRFGQNPDTFYGMRSDVN
                     KNLTTVGGTAKTDHAIVGDFQNRFKWGYAENIPLEIIEYGDPDQTGRDLKAYNEICLR
                     TEVYIGWGILDVDAFARVQA"
     gene            complement(18256..18711)
                     /locus_tag="AC1PJC_000318"
     CDS             complement(18256..18711)
                     /locus_tag="AC1PJC_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001288694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage scaffold protein"
                     /protein_id="HIP6619360.1"
                     /translation="MSTFTPITTQEEFDSAIRARISREREKFADYDSLKERVAHLESE
                     NATLKESVEVGKQSKADFDKKVAELQSQIAGFESEKLRNRIALEHGLPLEMAGRLQGD
                     DESSLVADAQSLAGFIKATEPVAPLKNEEPIVDGKHAGIKQMLQNLKGE"
     gene            complement(18782..20194)
                     /locus_tag="AC1PJC_000319"
     CDS             complement(18782..20194)
                     /locus_tag="AC1PJC_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000101482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HIP6619361.1"
                     /translation="MARKKLGNQNPTQSVILKYVKKRSKAHEAIDIYQRTGLSCYAWQ
                     VNMLQHVMATDKNGLWVHQKFGYSIPRRNGKSEILYMLELWGLENGINMLHTAHRIST
                     SHSSFEKVKRYLEKMGYVDGEDFNSIRAKGQERIELYKSGGVVQFRTRTSSGGLGEGF
                     DLLIIDEAQEYTTEQESALKYTVTDSDNPMTVMCGTPPTPVSSGTVFTKYREACLFGK
                     SKYSGWAEWSVDEEKEIDDVAAWYNSNPSMGYHLNERKIEAELGEDKLDHNVQRLGFW
                     PTYNQKSVISETDWESLKVEDMPKFSGKLFAGIKYGQDGTNVALSIAVRTIDDRIFIE
                     TIDCQSVRNGNQWLVSFLQRADVSQVVIDGASGQRILEEELKVAKIKPIVLPTVKEII
                     TANALWEQGVFQKTLCHNGQPSLQRVVTNCDKRNIGSNGGFGYRSHFDDMDISLMDSA
                     LLAHWACLTTKPKKKQKVSM"
     gene            complement(20265..20450)
                     /locus_tag="AC1PJC_000320"
     CDS             complement(20265..20450)
                     /locus_tag="AC1PJC_000320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619362.1"
                     /translation="MTMTESQRNFLERMESQSYNSHLTPEQLEQGKRNRQKISERLLA
                     KAEQEGLDVPRRFLDIT"
     gene            complement(20454..21803)
                     /locus_tag="AC1PJC_000321"
     CDS             complement(20454..21803)
                     /locus_tag="AC1PJC_000321"
                     /inference="COORDINATES: protein motif:HMM:NF015461.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosyltransferase"
                     /protein_id="HIP6619363.1"
                     /translation="MVHDILPDLLNEVKDKFEAEYGKSVVISSAIDQLKKNKANYGSA
                     NAFAIEVGEILAEALSSSVTGDKLPDGKMYYNIGQRLLTDVLGRNHELVSDYTSQVQK
                     QLNLEAEIGLKVQVPGLNQDRLSGIINRLSYEESFEEVDWLLSEPIINFTQAIVDDFI
                     KLNVDSQASVGLSPKIIRKQAGRCCKWCSNLVGTHTYGEEPEMVWHRHRYCRCTVEYF
                     SKGLKSKYKSNVHTKNKELVNRSDRIRIKRSETKERSLNNARLKRIAVAKAKELGLKP
                     TADNRIVDVMRRESDKWIEKLNEFEKRSISKYTDNGIDSDGLKLFQKLNGYIDGYYNP
                     LNDTEEEMILQNIENIQLSLLKNKIEKDIIVYRNEVLPEKLTDYNRFLSTSVTQTGAL
                     GKKPNVAIIVPSGHTGGYVEKLSNYPKQREFLLPQGTQLEEVFTDSELKIFVAKGVE"
     gene            complement(21793..23070)
                     /locus_tag="AC1PJC_000322"
     CDS             complement(21793..23070)
                     /locus_tag="AC1PJC_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000172765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619364.1"
                     /translation="MALRGMGYLRKKLALHKPRVDTRYKQYAMKAQEPDVGIVIPAAI
                     RERYRSVLGWTTKGVDSLADRLVFREFGNDEFEVNEIFERNNPDVFFDSVVLSALIGS
                     CSFVYLSKGADGEVRLQVIEASNATGVIDPITGLLTEGYAVLSRDDYDNPTLEAYFMA
                     DVTWFYPKGSQPYSVKNPSGQPLLVPIIHRPDAVRPFGRSRITRSGMYYQQYAKRTLE
                     RADVTAEFYSFPQKYVLGTDPELEFDTWKATVSSMLNFSMDDQGNKPSVGQFTTSSMS
                     PFTEQLRTAAAGFAGEMGLTLDDLGFVSDNPSSVEAIKASHENLRLAGRKAQRSLGAG
                     LLNVAYVAACLRDSYPYLRSQFVKTVVKWEPLFEADANMLTMIGDGAIKLNQAIPGFI
                     DGETIRDLTGIRGKAGAVDSVPLALEKEQGDGT"
     gene            complement(23168..23503)
                     /locus_tag="AC1PJC_000323"
     CDS             complement(23168..23503)
                     /locus_tag="AC1PJC_000323"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003074821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease signature motif containing
                     protein"
                     /protein_id="HIP6619365.1"
                     /translation="MEKRPDRHGPHRVAFEKNKKIILKTRSTCGICGNPVDKSLRYPH
                     PLSPVIDHIIPIIKNGHPSDINNLQLAHWQCNRQKSDKLFADEKANGNKVIGNRNLPQ
                     SMDWTKYRG"
     gene            complement(23646..24212)
                     /locus_tag="AC1PJC_000324"
     CDS             complement(23646..24212)
                     /locus_tag="AC1PJC_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000754954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HIP6619366.1"
                     /translation="MRKVEPIRDVDDIERMKDFLFAQSHRNYILIMCGLYSGLRISDI
                     VKLQVRDVLRDHIEIVEQKTGKSKTFAINNELRKALDKYIKDNDLKLYDYLFPSRKRV
                     NSDGLRITHIGRVAAYQIFKTAANHIGLYNIGTHTMRKTFGYHFYKKTQNIVLLMEIF
                     NHASPDITLRYIGYKQDELDKAMLDFSY"
     gene            complement(24336..24761)
                     /locus_tag="AC1PJC_000325"
     CDS             complement(24336..24761)
                     /locus_tag="AC1PJC_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001115776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArpU family phage packaging/lysis
                     transcriptional regulator"
                     /protein_id="HIP6619367.1"
                     /translation="MPLFPEVDVSKTKENAKKILRGYPRWRRIANDFDGQKVTQEYTF
                     MPRNMSSAPSKPVEKLAIRKADALLELEAIEQAVSNLLDPYSRVVLFEKYLARIPNKD
                     YTIYSDLGISESSYYDLLDKALLEFAEIYRNGEQVEIVE"
     gene            complement(24766..24891)
                     /locus_tag="AC1PJC_000326"
     CDS             complement(24766..24891)
                     /locus_tag="AC1PJC_000326"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619368.1"
                     /translation="MILLEIIKFLAAMIVIAFLLVVLIAIIMGAWETYKKQSDKR"
     gene            complement(24888..25154)
                     /locus_tag="AC1PJC_000327"
     CDS             complement(24888..25154)
                     /locus_tag="AC1PJC_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001008140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619369.1"
                     /translation="MSFNGIRLLPDYGCKVEIDVVQLLKENEFLKDELYNRAYKDIER
                     QEIEIETLKDKCVDFMLENADYVWDEMARESTKKRANTRRWRAR"
     gene            complement(25144..25575)
                     /locus_tag="AC1PJC_000328"
     CDS             complement(25144..25575)
                     /locus_tag="AC1PJC_000328"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619370.1"
                     /translation="MIEQHTEIKRLFQSFPDGYINDQWEFVIGRTEDISIPLEQIADK
                     WDSAKFILMFASHEAVEGRVSWNWFVNVNYRRSLRNQINDFLNTKFGRADFATIAYLL
                     GQCRNPALTKKFVEHGCKMSILYRYQVENNEFEEQKVLNEF"
     gene            complement(25575..25919)
                     /locus_tag="AC1PJC_000329"
     CDS             complement(25575..25919)
                     /locus_tag="AC1PJC_000329"
                     /inference="COORDINATES: protein motif:HMM:NF024835.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIP6619371.1"
                     /translation="MEVKKEVRNFRIFYEGQEDLMNLEEWLAYRQIKKSMFAKLVGVH
                     PVTVSRWIAGARQPACEQLGAICHVLDCKPFEIAWKEPLSTTTTAADSGKRGNILTNW
                     LKSVKEFAKEVG"
     gene            complement(25932..26345)
                     /gene="ssb"
                     /locus_tag="AC1PJC_000330"
     CDS             complement(25932..26345)
                     /gene="ssb"
                     /locus_tag="AC1PJC_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000609565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HIP6619372.1"
                     /translation="MINNVVLIGRLTRDVELRYTPSNVASATFTLAVNRNFKNAAGDR
                     EADFVNCVMWRQQAENLANWTKKGHLIGITGRIQTRSYDNQQGQRVYVTEVVAESFQV
                     LEKRDNSANYSSMDEQMPPGFGGQSMDITDDDLPF"
     gene            complement(26335..26553)
                     /locus_tag="AC1PJC_000331"
     CDS             complement(26335..26553)
                     /locus_tag="AC1PJC_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619373.1"
                     /translation="MTNEKLGVLLVDVPEPKKWKYSFLVRGLFLSFTMGQADDYLTVE
                     RYAYKCTKEESKKYPQFRWVALEELHDQ"
     gene            complement(26546..26905)
                     /locus_tag="AC1PJC_000332"
     CDS             complement(26546..26905)
                     /locus_tag="AC1PJC_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003052422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YopX family protein"
                     /protein_id="HIP6619374.1"
                     /translation="MIPKFRVWDTVKKAMGDVEAIVYTEERVYPFYSKVVRRYIPFSE
                     AILMQSTGLFDVNGQEIFEGDVVRMHSGELLPVRLHHGMFGPVCYYVSSVFEKVGNIF
                     ENPELTEHPDFREATND"
     gene            complement(26902..27144)
                     /locus_tag="AC1PJC_000333"
     CDS             complement(26902..27144)
                     /locus_tag="AC1PJC_000333"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619375.1"
                     /translation="MPQVAVDYYERYKDQSTGFDEWFGDFYDGGFLADFPQGEKLAEW
                     LYDNDDDTNRQRELALAQKIMFGLCSSWLFYEGDRK"
     gene            complement(27251..27805)
                     /locus_tag="AC1PJC_000334"
     CDS             complement(27251..27805)
                     /locus_tag="AC1PJC_000334"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619376.1"
                     /translation="MGLVRLYTEEELDYLWLAIEDKESNYEDVAALLGRTVCGVKGKV
                     WKLTNGTNKGGLVRRPWTPDEIDKLRQLYPILPMEVVCERLGRTKSAIKTQVVRLGIR
                     KHELIYRDEDEIRYLAEQGLSYREIAERTGGTAKNLMAYAYNRGIKVQPEKRSDNHPW
                     RLDAEKIFAQKERWKKEHVEKTNE"
     gene            complement(27769..27975)
                     /locus_tag="AC1PJC_000335"
     CDS             complement(27769..27975)
                     /locus_tag="AC1PJC_000335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619377.1"
                     /translation="MLVAEIIATCHKINTKPNIHLGEVQDVYESKDGQMRYYVNRKNG
                     VAYLYATQERGKIWVLSDCTQKKN"
     gene            complement(28159..28725)
                     /locus_tag="AC1PJC_000336"
     CDS             complement(28159..28725)
                     /locus_tag="AC1PJC_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017768568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619378.1"
                     /translation="MVDIVDIYMECGDFHTAVKQSGLPIHVAHLKLLKSGCLKIQDKI
                     RYGSKGAKLGGQAEELFQTLVPDAVDANRYFQKNNPVYDFILKDVTIDVKYSSLHIDK
                     RYGTRKSHWSVGARGEQDFICAFLERAEGEQLNDPIILLLPMAFIEVKKDLHISQSGA
                     WIKEFQIEPEELQPTLKEYVALREQGLF"
     gene            complement(28718..28966)
                     /locus_tag="AC1PJC_000337"
     CDS             complement(28718..28966)
                     /locus_tag="AC1PJC_000337"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619379.1"
                     /translation="MVRNTIEDVNNLLVAQLEKLSFDDLSPEELELEVTRSKAMVHVT
                     DEILKTQALALRVVETLSEVTNKEVIPPRMLLGGGENG"
     gene            complement(28967..29272)
                     /locus_tag="AC1PJC_000338"
     CDS             complement(28967..29272)
                     /locus_tag="AC1PJC_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003058522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1372 family protein"
                     /protein_id="HIP6619380.1"
                     /translation="MRKIFTAIGNFCILLSILVTSLLIIYKIDKLDAKIEQPKIIVYQ
                     VDNAGTEMFGKVTSKDVLDGHYYVEVKPYGKFLVTREQYESINIGDVMPEWLKGRKK"
     gene            complement(29269..29754)
                     /locus_tag="AC1PJC_000339"
     CDS             complement(29269..29754)
                     /locus_tag="AC1PJC_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000169323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MazG-like family protein"
                     /protein_id="HIP6619381.1"
                     /translation="MTKTLDEKVQQWFIDRNLHEANPVKQFEKLMEEAGELFEGVAKG
                     KSDLIKDALGDMQVVLTGLELQVKNGADIRATPEEMELLLMVASLGNLANKLHKHVFY
                     DETKTPLIKPDLIMLHSNIHSVAIHNCTTADTCLKIAYDEIKDRKGKMIDGVFVKEAD
                     L"
     gene            complement(29747..29992)
                     /locus_tag="AC1PJC_000340"
     CDS             complement(29747..29992)
                     /locus_tag="AC1PJC_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000120544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619382.1"
                     /translation="MNYAATMIINGHQPVHIGYFDTKESAAEAIINHAKNNSAEKRLR
                     FIATKKIRSQTIRIDYGAVDCYYLITISKEKENEQND"
     gene            complement(29989..30183)
                     /locus_tag="AC1PJC_000341"
     CDS             complement(29989..30183)
                     /locus_tag="AC1PJC_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006150489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619383.1"
                     /translation="MVKLKHGSKQDRPFIREVRVNCTGIDIQYGNERQAMQFASRAAA
                     IHVSRALKDYGNFYLVEEEG"
     gene            complement(30170..31039)
                     /locus_tag="AC1PJC_000342"
     CDS             complement(30170..31039)
                     /locus_tag="AC1PJC_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014570749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage replisome organizer N-terminal
                     domain-containing protein"
                     /protein_id="HIP6619384.1"
                     /translation="MASAIKWIKIVTDIFDDEKILLIESLPEADTIIVVWFKLLTLAG
                     KQNYSGVLMMNDRIHYTDEMLATLFRRPLNTVRAALQTFEQFGMIEIINNAITIPNWE
                     KHQSVESMEKAREQARKRVANYREKQKQLANSNVTCNVTVTHGNALDIDKEIDKEEDI
                     YNICPIQEIIEYLNSATGKSYRYQSNSNKKIIQARWNEGYKLDDFKKVIDNMVANWTG
                     TEWEKYLQPSTLFRESNFDKYLNMVPRVPQPAQTNVPVWANEEVKNEQTAEGQAVLAD
                     LYAELEAMENGET"
     gene            complement(31039..31275)
                     /locus_tag="AC1PJC_000343"
     CDS             complement(31039..31275)
                     /locus_tag="AC1PJC_000343"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619385.1"
                     /translation="MTRRSIFAHKVPKRVSTLKTNTGVDYAIWVQNSDIDDNELAKLL
                     DIDVKYVKRMRKLDWIPGHAVRERIDRLIVTRRE"
     gene            complement(31265..31420)
                     /locus_tag="AC1PJC_000344"
     CDS             complement(31265..31420)
                     /locus_tag="AC1PJC_000344"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619386.1"
                     /translation="MVWVVAKKNKRGRRKYHYKKCFDSWQVARVYQQDLWNKGVNAEM
                     WEERDDT"
     gene            complement(31423..31677)
                     /locus_tag="AC1PJC_000345"
     CDS             complement(31423..31677)
                     /locus_tag="AC1PJC_000345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619387.1"
                     /translation="MKFWNMMKKFLSVEEDDYIPQSQHALELELANARHTAKEYKKLA
                     LLKNQECVGQARLIDELRRRIDFLENVNKCQAELLADREV"
     gene            complement(31679..31861)
                     /locus_tag="AC1PJC_000346"
     CDS             complement(31679..31861)
                     /locus_tag="AC1PJC_000346"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619388.1"
                     /translation="MTEELFLTTEQALFAIAILFPLLFWLVRKPVTIEIKEPVVEEKQ
                     PERNLRYLQIHRYYGG"
     gene            complement(31858..32160)
                     /locus_tag="AC1PJC_000347"
     CDS             complement(31858..32160)
                     /locus_tag="AC1PJC_000347"
                     /inference="COORDINATES: protein motif:HMM:TIGR01764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIP6619389.1"
                     /translation="MNEMLEAFESLKREIVREVLREVRKELAVEKKPSQVADRAIGVA
                     EACRIMGMSRNPFMDLVKAGKIPFHMVGTHYRFDKRDVEYCKSKMKTLKRIKGVAV"
     gene            complement(32226..32942)
                     /locus_tag="AC1PJC_000348"
     CDS             complement(32226..32942)
                     /locus_tag="AC1PJC_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014634350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /protein_id="HIP6619390.1"
                     /translation="MNEIINVSVNDNQEPVVSGRQLHEALGVHSNYTTWFDRMTEYGF
                     VEGQDFLPNLEKSTGGRRAVDHIIKLDMAKEIAMIQRSDRGKQVRQYFIQIEKDFNSP
                     EKIMARALLLADKKVHQLEAQIEADKPKVLFANAVEASATSILIGDFAKILRQNGYDI
                     GQNRLFEWLRNNGFLIRKRGESYNMPTQRSMDMSLFEVKERTHNEPNGSIRISKTTKM
                     TGKGQSYFINKFLNEDTQKA"
     gene            complement(33066..33266)
                     /locus_tag="AC1PJC_000349"
     CDS             complement(33066..33266)
                     /locus_tag="AC1PJC_000349"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619391.1"
                     /translation="MKVFEKVVRISAKAYEFVVDFANKNDIKISEAVSYLIEYCATKN
                     LQLKQAHVEVVEVQHVVEEVDD"
     gene            33486..34175
                     /locus_tag="AC1PJC_000350"
     CDS             33486..34175
                     /locus_tag="AC1PJC_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018165612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619392.1"
                     /translation="MIFQVKIASSVSKSVTIDDICPNCKKPTNPHLVDSSYFPLGEEK
                     TSLVLTLRCLGCKHFWTEEFIATRHQINSYTDKYEIEHLKVTPNLPSDIPISDDVELV
                     SPIGKQIYVQALKAEHEQLDHIAGIGYRKALEFFVKDFSIVTNPDDEDKIIKMPLKQV
                     IEKYIKDDDLKTFALASAYIGNDEGHYYRNNPDKDFSHLKNYLHGVIHYMEMKLNFLD
                     AQELVNRSKKS"
     gene            complement(34298..34627)
                     /locus_tag="AC1PJC_000351"
     CDS             complement(34298..34627)
                     /locus_tag="AC1PJC_000351"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619393.1"
                     /translation="MKELIDFANFRIYDDGNEIHLLAPNKEVFDKTPAHEHGISFEIF
                     DENGLLDYDKTVEKIEFHNKIRNRIKNDPRGQAGIVADVFGVDMGEAEEIRRNLIEIG
                     KKKHGLS"
     gene            complement(34809..35018)
                     /locus_tag="AC1PJC_000352"
     CDS             complement(34809..35018)
                     /locus_tag="AC1PJC_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001167863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HIP6619394.1"
                     /translation="MQLLLYEARKQAGYTQKDIADKLGISETAYRQKELGQNDFKLSE
                     CYKIAKILNKEISDLFTNTTSQNER"
     gene            complement(35203..35337)
                     /locus_tag="AC1PJC_000353"
     CDS             complement(35203..35337)
                     /locus_tag="AC1PJC_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000969965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619395.1"
                     /translation="MDILKSLTPDELGTVLIVLGLVRQARLWYKQILDHKIEQAKLKK
                     "
     gene            35502..36263
                     /locus_tag="AC1PJC_000354"
     CDS             35502..36263
                     /locus_tag="AC1PJC_000354"
                     /inference="COORDINATES: protein motif:HMM:NF012920.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HIP6619396.1"
                     /translation="MNDKELSIYVGQKIKDFRLSRNMTQKELAERIGMGDTTIVNYEK
                     GIRTPKKNTLFKISEVLKTSIDDFFPPITPTAPNSLIEQISDKVVQLTEKGKKDVLRF
                     TSELLEREEADRIIQEEPLFKIYFRSAAKAGPKGYGYDDYDADFAYTNQKPPRHDVAT
                     RVDGDSMNPDYQDGDILYLRDYGASHYNGDECVVVIDDKSYFKRLYTTEDGLKLVSTN
                     PDKDAYPDIFIDFPPSDGSHIKIFNVVGSFTPVER"
     gene            36440..37456
                     /locus_tag="AC1PJC_000355"
     CDS             36440..37456
                     /locus_tag="AC1PJC_000355"
                     /inference="COORDINATES: protein motif:HMM:NF019371.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HIP6619397.1"
                     /translation="MKPFSDIGEQLRILQEDKKLLIQDMDNAIFALMNCGYYEIVNGY
                     KIFLLDPKEKDEVFKKGETFEHLASLYNLDKELRNYVMQATLEIESSLKTALAYTIAE
                     DFGVYEIDYLNRTNYVKGKWQKRHQNYQRDHLLDMLKDIAANRKVEPLISYRIKHGHI
                     PPWILFKEATFGNFVNLFKVLKGPQKNKVIAHCIGSDINLLTEDDKRLFGEMLDLVLA
                     FRNRAAHGGRIFNYKAKRNTALSYHSKFHPQIDISPADYRHGKGRNDFYTFFYSMVIF
                     DNKNGHNYLNFCLYKIIEHEKDYPSDLEILEKQMGFPQGRLYNEIEKLRQTINLYRLL
                     NDKN"
     gene            37701..38774
                     /locus_tag="AC1PJC_000356"
     CDS             37701..38774
                     /locus_tag="AC1PJC_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017370179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009009 - site-specific recombinase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HIP6619398.1"
                     /translation="MDIKPYKKNGKTYYKFTLYVGLVDGKRKYVKRANFKTISDARAA
                     ILSLQEEINRPKGDMTFQELTEKWLVIYETEVAESTYLKTSRNIKHHITPTIGHRRIS
                     EITALELQSHTQQWCSQLKYGRKILGLVKTIYRYAVRMGFVAISPAESVTAPKLKRTI
                     STTKDFYDKHELREFMQRVEATGDIRKIALFRVLAFTGIRKGELRALHWDDHYSKTLR
                     ISKAVTRGFAGEEIGPTKNKASERLVSLDDKTDQILQELKRQYPTTTLIFESETGGIL
                     SPTDPRRWLLEITEGTSLPVINIHGFRHTHASLIFDAGMTLKQVQHRLGHSDMKTTMN
                     VYTHITQSAVDNIGETFSKYLDF"
     gene            complement(38912..>39245)
                     /gene="ssrA"
                     /locus_tag="AC1PJC_000357"
     tmRNA           complement(38912..>39245)
                     /gene="ssrA"
                     /locus_tag="AC1PJC_000357"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:15.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
BASE COUNT        10826 a         9544 c         7156 g        11719 t
ORIGIN      
        1 cataaacacg gtgtcatcct agaaaggaaa tgattatggc ttggaaattt gataataaca
       61 tccccatcta tattcaaatc agcaatacta ttaaattgca gattgtgact aatcaattaa
      121 aatctggaga taaacttccc actgttcgtg acttagccga aattgctggc gtcaatccaa
      181 ataccgttca gcgcgctttg tctgatttag aaacagaagg ctttgtttac tcggttcgca
      241 caacaggtcg ttttgtaaca gataaacaag aattgattac acaaactcgc ctacatttag
      301 cacaaaagga actcgagaat tttgtgaaca atatgttaga tttggggttc aaacacgacg
      361 acctcactgg ccagttagat gattatttga aaggagtcac ttatgaataa cgcatatact
      421 ttggttgagt tacaacaagt ttcaaaatct tatggtggag ctgtcgccct aaacaatgtc
      481 aatttgaagt tgactgctgg aaaaatcata ggacttttgg gaccaaatgg ttcgggtaaa
      541 acaaccatga ttaaattgat caacggtctg ttacaaccag aatatggtca agtattgatc
      601 aatggtcgca ccccatcgcc agaaaccaag gcaattgtat cttatctccc agatacgact
      661 tatctcgatg agcatatgaa agtgctcgaa gcaattacat tttttgaaga tttttacgct
      721 gattttgata aggagcgtgc tcttcatctt ttacaagatt tgggcattga tttaaacagt
      781 cgtatgaaac atctctctaa ggggaataag gaaaaagtcc aacttatttt ggtgatgagc
      841 cgccaagcgc agctgtatgt tttagatgag ccaattggtg gtgttgaccc tgccgcccga
      901 gactacattt taaaaaccat cgtcaacaac tactctccga ctgcctctgt tattatctct
      961 actcacttaa tttcagatgt cgagcaaatt ttggatgagg ttattttcct acactacgga
     1021 agtgttattc gccatggaaa tgtagatgac ttgcgaattg aaagcggaga atctattgat
     1081 gaactcttcc gccaagattt taaggcttag ttagaaggag attactatgt ttaaaaaatt
     1141 attgaaatac gaatttcaat ccgtaggtaa atggtatttg ggaatttatg ccggggcatt
     1201 ggccctatct gccatacttg gattctggtt acaagctttg accttacggg cacaagctgg
     1261 aaccacagaa cctggtggtg ctgaaatggt tcttttcggt acatccttca tgaccttcgg
     1321 tatcttaatt gcagcactcg gtttatccac ctttttcatg gttattaacc gatttagaaa
     1381 aaatgtctat ggacgtcagg gttatctcac tatgaccttg cccgtatcta gccatcaaat
     1441 catcttaagc aaactgcttg catctattgt ttggtatatc ttggcaggga ttacgtgttt
     1501 actttcaatc ggaatcatcc ttgcagtcat tctagtagca agcgaagaag ctattatgcc
     1561 agaaatacaa acttttgttc aagctatcga ctggacagtt ttattcagtc agattgtcta
     1621 ttatttaatt gaaattacta ctggtatcct tttgatctac ttctctattt ctatcggtca
     1681 attattcaag gatcatcgct tcctctttgc aatcttgacg tatatcggca ttctcatcgt
     1741 tactggagtg tttggcactt tctttgtcct aagtaaccta gaaacagcat attctacacc
     1801 attttctctc tatccaagtc cagtcttagc attagtcaat attatcctag cctttgctta
     1861 ctactttgga acccacttca ttatgacaaa gaaattaaat ctacaataaa aagctcttta
     1921 ctggtctaat cgaccggtat agagcttttt tcttaatatt gttggtctaa gagttccaac
     1981 aaaacttgct tttcttcttc gctggcaaaa cttgcctgaa tagcattttg attgaagcga
     2041 taaaaatcag ccttgctagt cccaaaatat tctacaaata actgatattc tctattaagt
     2101 gtagtattag aaacggtacg attatctgtg ttgattgtga tgtttgctcc cgcctcaact
     2161 agctcacgat atggaaaata ttcaatcgaa tcagctgcac cagtttgaag attcgatgtt
     2221 agacacattt caagtgttgc tccgctattg acaaaagctt ggatagcttc aggattgcga
     2281 gtaagtgctg tgccatgacc aatccttcta atcccaagtt caagagcttg aatcacattg
     2341 gtcacacatc cacattctcc ggcatggaaa gtcatgggat aacctaaaga ctgagtaaat
     2401 tgaataatat cccgaagttc ttccgtagga tagtctgctt catttcctgc gaaatcaaat
     2461 cccacaagtc cttttggtgc caaatcagca atagccgaaa agagttcctt cgtttgattc
     2521 gtattcgttt gctttaaacc acaaaccaga agtttagcaa ccactccaaa atcttcctgt
     2581 cccctgttta gtccaactaa aactgctgag actgcttcta aaatagtcaa gtcttgatcc
     2641 gtcgacagtt caggtgcaaa acgaacctca atgtaaatga ccttatcact tgcagcttgt
     2701 cgtacaagat cataggctgc caattctaaa gctgttgcag tttgtaagag tgggcgaaca
     2761 aaatcaaata actttaaata agccattaaa ctatcaactt ttccatgaac actaactaat
     2821 tttcttaatg cttcatcttc tgcaggaata gtgattttag ccatctgtgc caattgtcga
     2881 atgactccga gggacaatga gccatccaaa tgacaatgca actctgtttt gaccaattca
     2941 tttacgttca acactgttaa cacaacctcc gtctggtata ttgttaacta tcatatcata
     3001 tttttgaaga aaaacaagaa ttttaccata aaacctgaac tttcacttgt tttcagttgt
     3061 atcattcaca gataaaaaag aacgactatc agtcgttctt caataacata cggaagacat
     3121 gggattcgaa cccacgcacg ctgttacacg cctaccgcgt ttccaacacg gcctcttgag
     3181 cctcttgagt aatcttccat atatggagct ggtgggagtt tccaaagtgc ttttagaaca
     3241 gttattacaa aaattgtttc cacactttgg ttatcactct acaattattg taacatacag
     3301 ctctgattca gtcaatacat ttttgagaat gcctactaga ttaggtgttc tttttattca
     3361 ttttcttgtg catattacac cttattgaca ccttcaaaaa tttcaaaaag ggattttttt
     3421 gcacggaaga gggcaacaaa aaacaccccc aacaatcgct gagggtttat gctatttttg
     3481 tcattttgcc cattttgtca aaatagaaaa caaatctcgc aaccattatt gacataatgg
     3541 agattttgtc aataatgcac atgatatgtt tattttccat gtgcgaatca gaaacatgca
     3601 aaccattgat acgactgcat ttgtcttttt cccaagtaaa ttccatgtgc gaattaatgt
     3661 gcgattccat tctaacttga gactatcttg agattatcat gacaaacaaa aaagcccagc
     3721 aaacgctggg ctgaatctat ttgaaagtac cccaagcagg gccatagcgc ttaccgtctt
     3781 tagtcggtcc agtcgccacg taattacgct tgccactacc gccaacgtat gaaatccaga
     3841 cgaaaccgtc aacatctaca acaacttcgt catacttgac cgactgccct tttttgtagg
     3901 ttgccacaat ctgtccagat gtgtttggcg cacgtcttac gttaattgca tcaaccgtga
     3961 cggtcatggt acctgtctcg cggtatgttc gcacccctgt caagttcggt gctgtctgtg
     4021 cgaccgtccc tggcggtgtg atatagtgca cgacctgttg acgatagctt gcagcactgt
     4081 aataattgcg gatagggtag cgtttgccgc cgtagttttg ttccaagatg gtcaacctat
     4141 cgccgtccac agcttcgacg attaccacat gcccgtacgg attgcccggt gtcgcaccca
     4201 aggtcacaat ctgaccggtc ttaaatgccc ccgatgtgga cacagcccag ccatttgcct
     4261 gccaattata tgcagagccg atgtttttag ctgagatagt atcgccaatc gctccgctaa
     4321 cccaaccaac accagcacca agtccgacag ttgcatccgg actaatcatt cgctcatacc
     4381 aactggccaa agcgtagcat tcgccgtttc cgacagatat gccggaccca acttgcgccc
     4441 ggacgttatt tagtgcttca tttactgttg tcatttaaca cctccgcaaa tggtaaaatt
     4501 aaaaaagcaa ttggcgcaca tacgacgagc gccaacacac agaaaataat tttaaaaacc
     4561 ttcatcagtc cacttttggt gttctgtagg tcaaggcttg cacgctgtcc tcgatgccag
     4621 ctgtggtcgg gtctgtgatg acaccggtca gtaccagcaa ggtcaacgct gtattgacca
     4681 catcagatac attgtcaggc agcttaaatc ccagctgttg gataagcaag agcaaagttg
     4741 caaggattgc tgcaagcgta gctttgtttt taaatcgtaa tttccagttg attttttgca
     4801 tactaattct ccttcaagat tacacgtttc aattcccgca catcgtcgcc cagacttttg
     4861 acctgctccg caaggaccaa gatagctttg ttctgctcgt catgattatc aagtcggcga
     4921 ttagcactct ctttaaattc cttgagattt tcgatgtcct tttccaggat tgtgatgcgg
     4981 ttttcctgct ttgtgatttt ggccgaaaaa ttggtccaca atcctacgac tgtggacaca
     5041 aatccgacca aggcatatac atgctctggt ttaatgtgca tttactactc tccttttgga
     5101 atgtagttca ccacattctc atctgcaagt tcagggtgtc ccatcaattc caactgtgcc
     5161 ttgactttct ttttaaaaat gcgtggaaca tccttaaatg caaaatcaaa gtgctcatct
     5221 acaatattca tagccattaa cattaccatc attttattac tccgtttctg tatctgtgtt
     5281 agcggtagaa ttgtcgctac cgtcgactgt atcaacgttt tcaatacttt catcttctgg
     5341 gacctcgcct tcttcaaagc tagtgtagaa ctctgtcagc atttccatga cagaaccatt
     5401 cagaatccta aatttatctt cgaccgcttg gaatcggatg ttccgctctt cctcagtctt
     5461 gcttaggcgc tcgattaggt cttcctgaac agactgcata gcctcaaatt tctcagcgga
     5521 ttcggccata aaacgcttag ctgattttac aacagcttcc atctcttcaa tcttctgcac
     5581 cgattcagcc atcgcacggt cagcgtactc agacttaaag tgagcctcac gggccaattc
     5641 gaccaattcg gtctcagtct tgtccatgtg attgcctact actttttcgg tataggttgc
     5701 gtagcttcct gttgtagacg caatagcaat ttctgtatgt gtgatttcac catccgaata
     5761 aaacggatac ttccctacca ctttccaggc tctcattcag atacctcctc tggtttcgta
     5821 gcctcgtcca gttgcttggt taattcagca acctgcgcct gcagaccagc aatcgtctgc
     5881 tgcgcttcgg tcagctgcac agcgagaaag ttcttcgtcg tcatttcctc tgacagtttt
     5941 gctacgagat cattattggt caagcgtagc gcttgagtga tttgttcttg gttcatagtt
     6001 tgctcctttt acctccaact ggagtagaaa ctccgctgat agttgccgtt attatttaag
     6061 ttattgaaat tgtcgaaaat tttattaagt acttcttcca aattcacata ggtgttattt
     6121 gctggattaa agattctgta atttgttgca gtgatagttg ctcttccgta atttccatat
     6181 ggaaataaag aaactgctga tccatcgcca aatgatttga attgccatcc tcgatatgtg
     6241 ccgttaccgt catcaaaaac cttatggcca atttgcacat catccgctcc gatatccatc
     6301 ttgtcaaaga aggaaccatc agattgaata ccgttccaaa ttctgatacc tgcaaaagaa
     6361 ccattgtttg gattttcact tccgtcacgg ttagaaccaa taacggttac cccaccaggc
     6421 tttcctccat agatccctgt atcaaactta ataaactgtg taggatatcc gctcaagata
     6481 cgcttcatag cggcttggtc agtatagcac agtatttgac catcgtttaa gttaacatcc
     6541 atcgcaccat tcgtcgcgga cagaatccct cccgatattt tactagccga caaggtcaca
     6601 gcctgtacct gtgtgataaa agcgttctta gcaaatatct gtttcaaata ggcctcattt
     6661 gcggtcattt tattgacaaa ggcttggtca aagaccatct tactaccgtc aatgctatta
     6721 accgctatcc gtgcagcatc cagcgtgccc gtcgtaatct tgccagcgtc taagctactg
     6781 attttagcgg atgtaatcac accgtcctgg atgtatgtct taccagtaat ctgtacgaga
     6841 ctaccgtcaa tcttgaccga accgtctttg tttaggttaa tctgcccaag cacatcgccg
     6901 gccttagtca gattttttat cgcataagac ccagctaacg tgctgacctg tgtcttgagc
     6961 ccgttagtgc cagacacctc ttggaccaga ccggcagccg tctgagtaac tttgctgacg
     7021 ttgtctagga tacttcccgc tgtgccgaca gcaccgatag tacgagtgtg actgtctact
     7081 gtgtcattca cagcgtgcag ggctgtgacg gtggcaaggt cttcaggggc tggtgaccag
     7141 tctgttggca aaacaccaaa ttcgatttta ggattactta ctttgatatc accatctgcc
     7201 tgtatccata atgctggaga ataaaatttt gtaatacttt taccttcagg gacagtgaat
     7261 gtctgactaa ttcgcttctt gattgtatct tcagcttgcc aaacttccca ataattaact
     7321 atgccgttta tctcaactga gcaagctaaa ccataccttt ttcgtgaatc cctggtggca
     7381 acattggtac cctcgacatc acatgatatt gtaactgatt ttattttatt caaattgcca
     7441 agcagttctg gagaaagtga gattgttttt ttgccccatc ccccacttat ttctgttttg
     7501 gaattaagta ggtagtttct cccaccaacc tcggtcggta tcatggattt tgtctcgcta
     7561 attgtccggc taaaactatc cgcagtctct ctgacgaggt tttggactgt tgtagccaag
     7621 gcataaggtt gcaatgcact acttgtaata taaccacgac ctgtgatgtt gctatcaacg
     7681 tccgacttgg tctgatagcc tttactagtg attgccgact cgacctgcgt atttgtcaga
     7741 cgtttgctaa tctcttgtgc attttgcgta atagccgttt cagcgctatc aactcgaccg
     7801 gtcagcgtat tgtaatcggt ctgagatact ttgctagata cgtcactaat caactgacta
     7861 attttagtct cagcagtaga gaccttatct tgagtcgttg tcaagcgatt ggatagttga
     7921 gtctgccctt cggcggtctg agtaattaag gtcttagtag aacttaactc cgaattgata
     7981 tcctctggag ctggtgacca gtcagtgggg atagacgaca gttcgatttt tggacgacca
     8041 gctaatgcag taccaccaac ttggacatac atgttcactt tgttcgcact tacaactgaa
     8101 actccctcag gaatttttcg cgtaaccgaa attcgttccc ttggttgcgt tcccgacacg
     8161 attttttgac attgcagata caagactttg ccgtcagaca agttcaatct gacttcacag
     8221 ccgatgcgag ataatcctct tgaatcaggt actaagtttt ctcctttaat atccaaactg
     8281 atggtcacat acttcccaga gtatgcgtag tcgataaatt cgggcgatgt atcaaaatac
     8341 ctacttccag aggtcgcata gacatcgctc ttcaagatat agtttcgccc acccaagtcg
     8401 ctcggaatct taccctcaac ccgagttaac tccgtccaaa tctgaccagc cacagtatca
     8461 acttttgcgc ttgcggtgtt gattttacca tcaagcgtct gtgtactaga tgtaagctca
     8521 gtcaacttac ggtctacagt ctcttgataa gtcgctagat tttgcttagc agcgtcagca
     8581 gtcgacttaa tctcgttgag tttcagcgtt gttccgcgga cattctcgtc gtatatagat
     8641 ttagccacat agttgttagc gatagccgtc cgttcagcag ttaactgttt ggccgtctcg
     8701 gtccgactag cagatagata ctgttcggct cgtgtacctt ccgcatcttt gtacgtttcc
     8761 aggctctcta atcgagtatt gattgcagtt gccgtctgct gggcgtaggt cttggcttca
     8821 acagccttac cgtcggcggt ttcgattcgt ctgaccaatt ctgcgctatt ttcggtcgca
     8881 tttcgaacat aagtattgaa ctcagaacga aaatcttcct cagaagcatg cggggtggtc
     8941 gcaatagtcc catcctctaa ttgagggtct ctgatatata tgatatcccc aacagcccac
     9001 gttatcgtgt ctgcataaaa ctggaagcta taccacctct ttgaattaac cgtatcggtc
     9061 gaaacgaacc tctgccagct tgttgtgaca tcaaatgtac gagacccgtt attaaacgct
     9121 tcgacaccca aaaacatcct cacagatttg gatgctttaa tatcaaccgc gtaggtcatt
     9181 gtccgacctt gccattcagc gcctcgcaag tcaacgaata ctcggtggaa cccacctcca
     9241 ccagcttgtg tacaggtagc tttgatgtga tagccactac gagctgtact atcttctatg
     9301 cgttcaaaac gccaaagtga ctgattattg taaaaatttt ggtttttagc aaaaccaaaa
     9361 tcttggatat agttagcggc accgaccctc agattctcaa accgctccct cacaccgtcg
     9421 attccacttt gcaagtcagc ggtcttgcga ttgatactat caatctgccc agtttgagca
     9481 ttgactgtct gtgtcagagc ctcatatttg gctcttgttt gactcagagt gtcctcgaca
     9541 gtcttcgtcc gactggtaac gctagcgatg tcgccagtcg ctttattgac ggttttagag
     9601 agttctgcga cagtcgtctt agtaccatct gccagcgttt cgactgtggt cacacgatta
     9661 gtcaaagccg tctgtgcttg ggcttgagct aaaatcttgt tagcttgcga gtttaggtca
     9721 tttcgcaagg ctgtggcact tgcttggcta tctctggcct ttcgatcagc gctagcgatt
     9781 gccgcctgca gttcagcctt agcagtattt aacgcttgac tgaccgttgc aacctgtgcc
     9841 cgtgcatctg cgatagcttc gtcttttgac tgtaaggctg ttgtgatggc actagcagca
     9901 tccgtcttag cttggttggc aagcgattcg acagactgag tcttggacaa gatgtctgtg
     9961 acttgtctgt cgtgttcttc ggattgggct tgcatggatt gttcgacctg ggcgatttcg
    10021 gtatcaattt cctgtttaat agcgtcagca taccgctcag cctctgcctt agactgctcg
    10081 ataccgtcat tgatttcctc ggctcgcttt tcaaactcag cgtcgaaatg acggtttgca
    10141 ttgtcgattt ccttctgcag tttctgttca aaggatgctg ataatgtatt tgtagcttta
    10201 tctacactgc cagcaaccat actagccact gtagacttga cagattgcga caccttacca
    10261 aaaccaattg acttcaatcg cttagacatc ggtccgaaat ggtagctagt aattttcaaa
    10321 cgcaaatcaa catcgaattg ctcgtggaat acacttaccg tgtcgaacat cttaacagac
    10381 acgtcagact tacctttaac atccagattg atagaatttt ctaccaaatc gcaaagtgtt
    10441 gaactgaaat aacgtttccc gtaggcagtt aagctagcca catctgtcac atcttggtca
    10501 ttgacctcaa tatctgcttc gtagatttga cgatattgcc caatcaacgg actatccact
    10561 gtcacagcaa ttacacggtc tgcctcacct tcggactgtc cttggattgt ctttttgaga
    10621 tgcaatcgtg tctttaagtt gttgatattc tcagactctt cgtagctact gagatttttc
    10681 ttgtacataa acagcgactc attctcaata ccgccgtttt ttaacaattt aacctggtac
    10741 ttgtcacgca ccaagtcacc accccactgg ccaacaatag agtgtttatc cttgaccaaa
    10801 gcatccataa ccgaaacatt ggactcgtta aaagtatggc gatccatgat atcgctgaaa
    10861 aaggtaaacg gacagttccg cttgatacta ctagctaagg cagtcatagc cgtctgccca
    10921 ggtaccctgt caaccgaaat agagttgatg gagtagtaat tcaatagtgt tgcgacctgc
    10981 ttagcataga cctgcacatg gccatttact ttctttacct caaaaataaa aaattcctgt
    11041 tcaccgtgca gatcatcagc cagcagaaag acttcccttt taagtagatt ccacttacca
    11101 tccgtcaaag gaaatttgaa agatagttgg taggtgctat tggcttcctg cacgatgtca
    11161 tcatcataag caagattgag cgggatgttc ccgtctttta gataaatcaa accttatacc
    11221 tccaattccc tttgatcgtt attttcgtaa cggtcccact tgttacgata ccgctccgac
    11281 cgacaggtat ctcaaagaat ggaccacgtt tccgaatggt attcttcaca gcaccattct
    11341 tatcatagat attttgtcgc ttatgccgac aatcaatagt cgctcgagta tccaattcca
    11401 attccatcaa ttgttgacca atggtcaagg tcacacgtcc cgaaccctct atgataatga
    11461 taggctcaga atagactgtg ccaggattct gcacagaacc agatgaagtc aaaacgacat
    11521 cggatggatt tttgacatac cgaaacggat gcatggacac cgtgatttcg actttccaac
    11581 gatgtggacc aagtggtatg tagcaactag ataccaaatc acaatagaaa aggctatccc
    11641 tcagatagcc aaattccact atgttattat caggttgaaa tatctcaatc agtcgcatag
    11701 catccgacaa atgcctcagc gtgatgataa atgtcctgtt gtagccatca tacgcaccct
    11761 cgctgacatg tagttgacca ttggcaccga agacctcgac ttgttcagac cgctcaatcg
    11821 atgcctgagc cttaccaaag tcaaggacat ggcaatctgc aagagttgag gtgtttaaat
    11881 cattgattat catataatcc attaaatccc ctcccttgcc ataatcgctc cttgatgcat
    11941 gtaactattc tgggctaatt tttcaccgtc caaataaact gccaactcct tatctaccaa
    12001 agcagacaag aagcgctcaa tatttgccaa acgtgcactc aagctactac ctccatcact
    12061 tacagccaaa tcgccagtag aagacagcaa gtttcgccgt acatcaaccg atgcactcga
    12121 agtcatatca taggccaaag actgattttc aaatggttta gcaattgctc cagccatgcc
    12181 agataccgtc cccataacat ctttgaatcc cacttgtaag ttggtattta agccttgcat
    12241 gatagcaaga ccagcaggtt tcaaaagtac tcggtcataa gagataggac ccttgttttt
    12301 cgcaatccaa ctagcaatac cacctacaaa gtccgtgact gccccccagg cagattttaa
    12361 accgcccaga aaaccttcca taattgctgc ccctgcccct gaaatgtcga tgttggcaag
    12421 tccagtaatg gttgatgtga tattgctaat gattccgcca acggcacttc cgacgctcga
    12481 tacaacgctt tggaaacttg taaaagcgcc cttgatacca gagatgacac catcaatgat
    12541 tcctttagca acttgaatgg catcttgaat gcccatccaa gccaaggaaa agacattctt
    12601 aagcacacca acagcatttc cggcaccaga aaaagccaat ttgatccagt cgatgactgt
    12661 tcggatgata ttcccagccg tctgaatagc tgattgaatg ttggtccatg ccgatttgat
    12721 aaaggcactc aaaccttgac cagcagtccc cagattacca aacatgccaa tggctacacc
    12781 aatccattca gcaatagtac ttagcacagg ctggacaaaa ttcaaggcct gtactagaaa
    12841 atcgactacg ggtgtcaaaa actcgatagc aactttcaag gcatcaaatg caaacgaaac
    12901 ccctgacaag actcccttta ggactcctcc aaggaatgac cccagaattt gtaagacagg
    12961 catcaaagca ccactcaaaa tactgattaa aggctgcgcc gcattccaca tagacacaaa
    13021 cgattgaacg actgagtcaa tggcagggct gacaatgctc ataaaagtct gaaagccagc
    13081 ctggaccgct ggcaaaatag ccgtcaccaa attctgaatg cctgagaagt ccatcctcga
    13141 aatgccatcc ataatagtcg tgatgattgg ccctactgat cctgaaatcg ttgagaagaa
    13201 acctggtact tgtccaaata gagtctggag cgtagaccat actccctcaa acccagttcg
    13261 aattgtattt gcaaaattga caattgttgt tgctgtacct tcgctgaccc ccatttgagc
    13321 cataaaatca atattgtctt tcgcactcaa cgacccaaaa atcatgtcat agaacgatgt
    13381 aatgacagag ccaatctgtc ctgacacgct agtaatttta gcagcggtct caggatcaaa
    13441 cccaacctta gtcaacatat cgatgttatc cttggcactc agcgaaccaa aggtcatatc
    13501 gtaaaatgtc aagatgattt caccaagctt atttaactca cccatgacct ttccagatac
    13561 ttcactaccg aaaactctac ttattccctc gctgagaaga ataccaagca tagtcggcaa
    13621 tcccttaaag actctttgaa ccattgggag taaatttcca aaaaggaatg tggaagttgt
    13681 ctccatcaat gcgaccaaac ttggctcaat atcttcgccc agagatagat cagctaaaaa
    13741 gtttgatgtg gcagccttca tagcagcaag cgaaccataa taggtattct gcgcctcagc
    13801 ggctgcaaca ccggatagac ccatactttc ttggacaagg tggatggcct cgactacatc
    13861 tgcgtagtta ctgatatcaa atttgcgtcc cattgcagac ggcaagccct cagcagtcgt
    13921 cagtaatcgc tccatttcag cctttgttcc accaaaacca agcttcaggt tgtccaacat
    13981 agcatagttt ccgcgggcta aactttgata ggtctgttgg atgacaccga tatctgtacc
    14041 cattttagcc gcattgtccg tcatgtccat gatagccacg tttgccatgt tgattgcctt
    14101 ggtcgaatca ccaccaagag cttgtttcag gctagccccc atggacactg cttgctcagc
    14161 gtatgtattt gcggatatgc cagccttata tgcttggctt gcaaagcgtt tagcggaagc
    14221 ctgagcccca tcatagatag tatccagacc accaaaagat tgttgcagat cagcaccagc
    14281 actcaaagct gaaccaatta ttttcccgat tcctgcagct gcaagtgctc cacttaaagc
    14341 agagacgagc gaggcaccga gacttgagcc agcagttcta cctgcgctat caacttcgcc
    14401 acccaataat ttcgaaatcg acccgctaat gccttttgca gacgggacta tctgcacata
    14461 agcagaacct aaatcagtcg ccacgctcct cacctccaat ctctatttct agcgcacgca
    14521 tagcacgttc aaagtcctca ccagaagaaa agacacgttc ctcacgttcc actttcgacc
    14581 cttccaaggc ttgagcaaca gagtttggac gattccgtcc agcctgtcca tccttagttt
    14641 ttgcccaaaa gagcaaacgc accgtgtcat agatacctgc aagcagcaga gtatccaagt
    14701 cttccttctg accagataag attttcttaa tccgtgattt ttcgcttaac ccgcaagcaa
    14761 aaacagctac ccttgataga ggtagctgtc gataatcata tacgccatag gtttcagcca
    14821 aatcacagat aagagcctcc tcatctgccg caatcattct ggcgaggatt gcgagttttt
    14881 taagtctttg acttgttcaa agacatcctt gatttcagca ccaagagcag aaataggcac
    14941 cagccctttt tctgtacgga catggtcctt gagtttcttc gcttcgtcgc cgagtaacag
    15001 attgacaatc cgaatcatgg caccactgtc tccagattct tcagcagcga ttgcctcaaa
    15061 aagctcatag ttttccaaac ggtcttggtc aatgctaagc acaagacctg tactagtttt
    15121 tacttcaaac attcaaacct ccttacgatg acgatggcga gcttgttcct gttgactcgc
    15181 tagctccctt aatgtactca tagtgtgtat tgcccttgct gtcaggcaaa gcttggatag
    15241 tcgtttcgta accagccaaa tcactatcag cgtaagtaat ctccccgact tccagcacct
    15301 tagcatttgg gatgacaatc cgcttcttag caccattttt cagcagcata tccactacca
    15361 atggatgcgt aggcaattcc ttagagttga cctccacagt aatccctgat tcaaggtcgc
    15421 ctttcacatt ttcaggacca tagacctctt ttaagacatc cacatttaac acctcaatga
    15481 gtgtgtaggt aaatttgtct gattttcctg tttgaggagt atcaaccaca tcaccgcccc
    15541 aggctttcag ttcttccgat tcacgagtgt cctcgttagt caagccatcc tctgaaatgt
    15601 agcctaagtt tttaaaagcc gtgtttagct tagtagtcgc attggtcggc aagctcgttc
    15661 ctgttggagc tgaggaaatc gccccagcaa tatcaggctt tgctgacgac acaagttttg
    15721 catctgccat ataaattctc ctttttaata ataaataaaa tccactaccg cttgatagcg
    15781 atagcgtttg gtttccgtgt cggtaaaatt atagtctgag ttcaattcaa ccctgctgat
    15841 agttggtagt tcaaccatct tctcaacagc ttgtttgacc tcttcattca aaaaggcagc
    15901 ctcttccaaa gactgcccat aagattgtat cgccaaagtt gcttgattca gatggttctt
    15961 cttgccaccg ctggtctttt caaataccac aaagctatcc ggcatctctt cctcgtgctc
    16021 cgtatagaca ggcacaggca gatgggcaga taagaagttt aagcaaataa tctcaatcat
    16081 gatttcaccg cctttaacaa ggtattgtgc ttcttgttgt cccgcttagc tttaatacta
    16141 tccgcataaa ccatagcatt ggcacgagtc tttccgacat agatatccga ttcataccca
    16201 ttgcctgcac ggtttcggat agcatttgcc ttgtcagtca aaaccgcctg catctcaggc
    16261 gatttcaaca gttcacgaac acccgcacgg ttcaacttaa atttcattct agccataccg
    16321 ttccaccatt actttcttgt tccaatcaag cggaatcaaa tgttccaatc cctcaagagg
    16381 taaacctatc gttcgccagc gttgaccaaa gaaacagacc tcacgatttt cccattggtt
    16441 cgtatcccct ttgggaatag ctagcgtgta ttccactttc tttcctgtca gattgatttg
    16501 gttggtgata tcctcagttg atgcaggagc aatcaagacg ttctcaacca caatctccac
    16561 atctgcagtc tttgggtgac caaatgaatc attgccaatg acttgcttgt caatcaagac
    16621 cacaggtacg cctttaatct tagtcataca gctcaatcac cccaaatcgt tgttttttga
    16681 ccaaacccaa ccgtttgagt tcgctatcct ttataaagag acctccgcca ggtaccaaat
    16741 aagaaccgct gaaagaatag cccaaggcag actccgtaac actggtcatc ggctcttggt
    16801 cagtcgaagt catcaaggtc cttgcgacca catcgaccac caccgatttg accacactgg
    16861 cataggcagg attatcagca accatctggt caaggtcctt gccaaacttc tcagcctcca
    16921 cccgcagact gttggataca acctcaagaa gagctttggc tctctctttt tcatcaaatt
    16981 tcaattgacg ccacaaaagt tccaagtcat ccagggcggc caagtttttt agttcagttt
    17041 cttccatgac ttcctttcta ctacggcgat tctaatgcat tttcgtaaat aaccacccac
    17101 aaaaacacca tagaatgccc tagaatcgct ctctcagcac cactaatcag gcttgtttgc
    17161 ctcatataat tccagcaatt cagccttctt agctttcggg ttaaattcaa ctccaagttc
    17221 cgtcaacaat gattttaatt catcgctaga cggagttttt tcttttgagt ctctttgaat
    17281 tggttcccaa tcaccagaaa gcagactatc ggttacgata atctgccctg ttttcttatc
    17341 cttatattcc atatataccc tcctaagctt gaacacgagc aaaggcatcc acatcaagaa
    17401 taccccaacc gatataaact tccgtacgca aacagatttc attgtaggcc ttcaagtcac
    17461 gaccagtttg gtcaggatca ccatattcaa taatttcaag tggaatattt tcagcatacc
    17521 cccatttgaa acggttttgg aagtcaccaa caatagcgtg atcagttttg gcagtaccac
    17581 ctacagtagt caaattcttg ttgacatcag acctcatgcc gtagaaagta tctggatttt
    17641 gaccaaagcg gaactcagga tattgagcaa caccattaac cttaattttg gcaagggctt
    17701 gaccagcaac tggagaaaga gccaacccag tcacttcacc gccttttgaa gtaacttgtg
    17761 ctacggctgc atcgatatct tcatcaatcg ttccagcatt gaaggtaaca acatttccag
    17821 taatcagccc atcaaatgaa ttttcagcct tgaatgaagc gtcagtcatt gattttggct
    17881 caagaccatg aatagcagcg atgtcaaaac ttttggcaat gatttttgca aaaccgtcgt
    17941 taaatgcttg caagtaagcg atctgttttt cttcagaagc gtttttgaat tcttcagtga
    18001 tacgagcctg gtaaacaaac ttcaaaggtt tgataacctt acttgataga gtagcttctc
    18061 cagccttttt ctgttcgccc tcaccaacaa tctgtgcatt tccctcaagg ttaaagacaa
    18121 attgttcaat tccagcaaaa ggaataggtg tctggttaga tagcttggcc aaaacggaag
    18181 cgccttggac ttttgaaata agatcagtta ccagttctgg tgaaaatagt gttcctgtat
    18241 taaatgatga cataattatt ctcctttaag attttgtagc atttgtttga tcccagcatg
    18301 cttgccgtca acgattggtt cttcgttttt caacggtgct actggctctg tcgccttaat
    18361 aaagccagct agactttggg catctgccac tagactagac tcgtcatcac cctgcaagcg
    18421 cccagccatt tcaagaggca gaccatgttc cagtgcgata cgatttcgca acttctcaga
    18481 ctcaaaacca gcaatctgtg actgcaactc agcaactttt ttatcaaaat cagcctttga
    18541 ctgcttacca acctcgaccg attctttcag agtcgcattt tccgactcaa gatgtgccac
    18601 acgttcctta agactatcat agtcagcaaa cttttcacgc tcacgactga tacgagccct
    18661 aatagcagag tcaaactctt cctgtgtagt aattggtgta aatgtagaca taatgtctcc
    18721 tttcttccgc atttcccgtg cgttcggtaa tttcgagcaa ataaatagca cctctcggcg
    18781 cttacatact cactttttgc tttttctttg gcttagtcgt tagacaagcc caatgtgcca
    18841 gcaaggcact atccattaaa gaaatatcca tatcatcaaa atgactgcga taaccaaaac
    18901 caccgtttga gccgatgttt cgcttatcac agttggtcac gacacgttgc aaagacggtt
    18961 gcccattgtg gcagagagtt ttttggaaaa ctccctgttc ccaaagagcg ttagcagtga
    19021 taatctcttt cacagtaggc aagacgatag gcttaatctt agcaaccttt aattcttctt
    19081 ccaaaatccg ctgaccactt gccccgtcaa taacgacttg cgacacgtca gccctttgca
    19141 agaaggatac tagccactga ttaccatttc tgactgattg acaatcaatc gtttcaatga
    19201 aaatcctatc atcaatggtt cttacggcaa tagacaaggc aacattggtc ccgtcttgac
    19261 catacttgat accagcaaag agcttaccag agaatttcgg catatcctcc accttcaaac
    19321 tctcccaatc tgtttccgaa atgacagact tctggttgta ggttggccaa aaacccaaac
    19381 gctggacgtt atggtccaat ttatcctcgc caagctccgc ctcaatcttg cgctcattca
    19441 agtgatatcc catcgatgga ttggagttat accaagccgc cacatcgtcg atttcctttt
    19501 cttcatcaac agaccattca gcccagccag aatacttact tttgccaaag agacaagcct
    19561 cacggtactt agtaaagact gttccgcttg aaactggcgt cggaggtgtt ccgcacatga
    19621 ccgtcatggg attatcacta tccgttaccg tatatttgag agccgattcc tgctccgtgg
    19681 tgtactcctg cgcctcgtcg atgatgagca ggtcaaaacc ttcaccaagt ccgccacttg
    19741 aggtcctggt acggaattgc accaccccac ccgacttata aagctcaatc ctttcctgac
    19801 ctttggcacg aatagagtta aaatcctcac cgtccacata gcccattttt tccagatatc
    19861 gcttgacctt ttcaaaggac gaatgggagg tactgatacg gtgggcggta tggagcatgt
    19921 taattccatt ctccaagccc cacaactcca gcatgtagag tatttcactc ttaccattac
    19981 gtcgagggat agagtaaccg aacttttgat gtacccagag accattttta tcagtagcca
    20041 tgacatgctg caacatattg acctgccaag catagcaaga caaacccgtc cgctgataaa
    20101 tatcaatggc ctcatgagcc ttagaacgtt tcttaacgta tttaagaatt accgattgcg
    20161 ttggattctg attgccaagt tttttccttg ccatatctac tcctttcaat cgtcacctag
    20221 tttaacgtca tacggcagga caaaaaaagc accgacgagg gtgcttacgt aatatctaaa
    20281 aagcgtcgag gaacatctaa tccctcttgt tctgcttttg ctaaaagtct ctcactaatt
    20341 ttttgcctgt ttctttttcc ttgttcaagt tgctctggag ttaagtgaga attataggac
    20401 tgcgattcca ttcgctctaa aaaattacgt tgtgattcag tcattgtcat tgcttattcc
    20461 actcctttag ctacaaaaat cttaagttct gagtcagtaa acacttcctc gagttgagtt
    20521 ccttgaggta ataaaaattc tctttgtttc ggataattac tgagtttttc tacatagcca
    20581 ccagtatgac cagaagggac tataattgct acattgggtt tcttaccaag ggctccagtt
    20641 tgagtaaccg aagtactcaa aaatctatta taatcggtta gtttctctgg cagtacttcg
    20701 tttctatata caattatatc cttctcgatt ttatttttca ataaactaag ttgaatattt
    20761 tcgatatttt gtaatatcat ttcttcctca gtatcattta gaggattata gtaaccatcg
    20821 atgtaaccat ttaatttttg aaacaattta agaccatcac tatctattcc attatcggta
    20881 tatttagaaa ttgaacgttt ttcgaactca ttaagtttct caatccattt atcagactca
    20941 cgtctcatta catcaacaat ccgattatca gctgttggct tcaatcccaa ctccttcgct
    21001 ttagcgactg caatccgttt caatcgagca ttattcaagc ttcgttcctt tgtctcgcta
    21061 cgttttattc gaattcggtc agaacgattg accagctctt tattcttcgt atggacattg
    21121 gacttgtact tacttttaag accttttgaa aaatattcaa ccgtgcaacg acaatatcta
    21181 tgacgatgcc aaaccatttc aggttcttcg ccataggtgt gcgtccctac caagttagaa
    21241 caccacttac agcacctccc agcttgcttc ctaatgattt taggacttaa gccgacactt
    21301 gcttgcgaat caacatttag tttaataaag tcatcaacaa tagcctgagt aaagtttatt
    21361 attggttctg atagtagcca atccacttcc tcaaaagact cttcgtaaga tagtcggttg
    21421 ataattcctg acaacctatc ctgattaaga ccaggcactt gaaccttaag cccaatttct
    21481 gcctcaagat tcaactgctt ttgcacctgg ctagtgtagt cgctgacaag ctcatgattt
    21541 cgccccagca cgtccgtcag caaacgctga ccgatgttgt aatacatttt tccgtccggc
    21601 aacttatcgc ccgtcacaga cgagctaaga gcctcagcca gtatctcacc gacctcaatg
    21661 gcaaaggcat tagcagaccc atagttagct ttattctttt ttaactggtc aatggcagag
    21721 ctgataacca cgctcttacc atattcagct tcaaacttat ccttgacctc atttaggaga
    21781 tcaggcagga tgtcatgtac catcgccctg ctccttctct agcgctagag gaactgaatc
    21841 aacagcccct gccttaccac gtatacccgt caaatcacgg atagtctcac cgtctataaa
    21901 gccaggaata gcttgattaa gcttgattgc cccatcacca atcatggtca acatatttgc
    21961 gtccgcctca aagagcggtt cccacttaac caccgttttg acgaattgac tcctcagata
    22021 aggataagag tccctcaaac acgctgccac ataggcaaca ttgagcagac cagcccccag
    22081 agaccgttga gcctttcgtc cagccagtcg taagttctca tgactcgcct taatagcctc
    22141 taccgatgat ggattatccg acacaaagcc tagatcatcc aatgtcaagc ccatctcacc
    22201 agcaaagcca gccgctgccg tccgcaactg ctccgtaaac ggcgacattg acgatgttgt
    22261 aaactgaccc acgctgggct tatttccctg gtcgtccatg gaaaagttaa gcatgctcga
    22321 aaccgtcgcc ttccaagtat caaactcaag ctctggatca gtacctagga catacttttg
    22381 tggaaaagag tagaactccg cagtcacatc agcccgttcc agcgttcgct tggcatactg
    22441 ttgatagtac atccccgacc gggtgatacg actacgacca aagggacgca ccgcatcagg
    22501 tctatggatg atgggcacca gcaaaggttg accactcgga tttttaacag aataaggctg
    22561 actacctttc ggataaaacc aagtgacatc agccataaag taggcttcca aggtcggatt
    22621 atcatagtca tcacgagaaa gcaccgcata cccttctgtt agaaggcctg tgatagggtc
    22681 tataacacca gtcgcattac tagcctcaat gacctgcaag cgaacttctc catcagcacc
    22741 cttagacaga tagacaaaac tacaagaccc aatcagagcc gacagcacaa cactatcaaa
    22801 aaatacatca ggattattcc gctcaaaaat ctcattaacc tcaaattcgt cattaccaaa
    22861 ttcacgaaag accaaacgat cagccaaact atccacaccc ttggtcgtcc aaccaagaac
    22921 tgacctataa cgctcacgga tagcagctgg aataacgata ccaacatctg gctcctgagc
    22981 tttcatcgca tactgcttat acctagtatc caccctaggc ttgtgcagag ctaatttctt
    23041 cctcaagtag cccatacctc ttaatgccat tattcgttct cctttcaatt ttggcgcgag
    23101 aaaaaatgta cagtgacggc gtgaagctct gccgaggtgg tggggagggt ggtacccccc
    23161 ttactcatca acctcggtat tttgtccagt ccatactttg tggtaaattt cgattgccaa
    23221 tcactttatt tccattggcc ttctcgtctg caaatagctt atctgacttc tgccgattgc
    23281 attgccagtg agcaagctgt aggttgttaa tatcagatgg atgtccgttc ttgattattg
    23341 gaataatgtg gtcaatgact ggactgagtg gatgtgggta tcgcaatgac ttatcaactg
    23401 gattcccaca gataccacat gtgcttcttg tcttgagaat tatcttcttg ttcttctcga
    23461 atgctactct atgtggccca tgtctatctg gtctcttttc cattcctgtt ccctctctga
    23521 atttaacata tcttatattc tgttaaattg ggacaacttg aattaatccc aatcatacca
    23581 acggtttcaa ccatttttct cagaaatcaa tttacaattt ctcaatatgt aaaatacata
    23641 gctttttaat agctaaaatc gagcatagct ttgtctaatt cgtcctgctt atatccaata
    23701 tatctaagtg ttatgtctgg agatgcatga ttaaagattt ccattaagag tacaatgttt
    23761 tgtgtttttt tgtaaaagtg atagccaaag gtcttacgca ttgtgtgagt accaatattg
    23821 tatagaccta tgtgattagc tgccgttttg aatatttgat aagcagcaac tcggccaata
    23881 tgcgtgattc ttaatccatc tgaattaact ctctttctgc tagggaatag ataatcatac
    23941 aatttcaaat cattatcttt tatgtattta tcaagagctt ttctaagctc attattaatt
    24001 gcaaacgttt tgcttttgcc tgttttctgt tcgacaattt caatgtggtc tctcagaaca
    24061 tcccttactt gtaacttgac gatgtcactt attcttaaac cagaatatag accacacatt
    24121 attagaatgt agtttctgtg actttgagcg aaaaggaagt ctttcatccg ctctatatca
    24181 tctacatcac gaatcggttc gactttcctc atgtttttta cctcataaca taaaaagaca
    24241 ggtcaatgcc tgtctagttc ctggtgtctc atactactat tttagcattg aaaagtgtat
    24301 atttactttg gttttacttg ccttttactc caaacttact ccacaatttc tacttgttcc
    24361 ccatttcggt aaatctcagc aaattctagc agggctttgt caagcaaatc atagtatgag
    24421 ctttctgata tgcctaaatc agagtaaatt gtatagtctt tgttaggaat tctggctaga
    24481 tacttttcga ataataccac cctactgtaa ggatccaaca gattacttac ggcttgttcg
    24541 atagcttcaa gctctagcaa tgcatctgct tttcgtatcg ccaacttctc taccggcttc
    24601 gatggagcac tagacatgtt tcgtggcata aatgtgtatt cctgggttac tttctgtcca
    24661 tcaaaatcat tagctattct tctccatcga ggataaccac gtagtatttt ctttgcattc
    24721 tctttcgtct tactgacatc tacctctgga aataatggca ttgcatcacc tcttatctga
    24781 ttgtttcttg taggtctccc aagctcccat gatgatagcg attagcacga ccagtaggaa
    24841 tgcaatcaca atcattgctg ctaaaaattt aataatttca agtaaaatca tcttgccctc
    24901 catcttctcg tattagccct tttcttagta gattctctgg ccatctcgtc ccagacataa
    24961 tcagcatttt caagcatgaa gtccacacat ttgtccttca gggtctcaat ttcaatttct
    25021 tgacgctcta tgtctttgta tgcacggttg taaagttcat ctttcaggaa ctcattttct
    25081 ttgagcaact gaactacatc aatttcaacc ttacatccat aatctggtaa caatctaatt
    25141 ccattaaaac tcatttaata ccttctgctc ctcaaattca ttattttcta cttggtatcg
    25201 atacagtatt gacatcttgc atccatgctc aacaaatttc ttggtcagtg ctggattccg
    25261 acattgacct agcaaatagg ctattgtcgc aaaatctgcc cggccaaact tcgtgttcaa
    25321 gaaatcattt atttgatttc taaggcttct tcggtaattg acgtttacaa accagttcca
    25381 gctcactcga ccctcaactg cttcatggct cgcgaacatt aggataaact tagcactatc
    25441 ccatttgtct gcgatctgtt ccaatgggat gctgatgtct tccgtcctgc ctatgacaaa
    25501 ttcccactgg tcattgatat acccatctgg aaatgactga aagagtctct taatctctgt
    25561 atgctgttca atcatcagcc tacctctttc gcgaattcct taaccgattt taaccaattg
    25621 gttaagatat tccctctttt accactatca gcagcagtag tagtagtgga aagtggttct
    25681 ttccaggcta tttcaaacgg tttgcaatcg agtacatggc agattgcccc cagctgctca
    25741 caggctggtt gtctcgctcc agctatccat ctagacacgg taactggatg gacaccgacc
    25801 agtttggcaa acattgattt cttaatctgc cgataagcta accattcttc cagattcatg
    25861 aggtcttctt gaccttcata gaaaatccga aaatttcgga cttctttttt tacttccatg
    25921 gacatgtcct cctaaaacgg caagtcgtca tctgtaatat ccatcgactg gccgccgaac
    25981 cctggaggca tttgctcatc catgctggaa tagttagcac tattgtcacg tttctcaagc
    26041 acttggaaac tctcagcgac aacttcggtc acatagacac gttgcccttg ttgattgtca
    26101 tagcttctgg tctgtatccg acctgtgata ccaatcaagt gtcctttctt ggtccagtta
    26161 gctaagtttt cagcttgctg tcgccacata acgcagttga caaaatcagc ctcacggtcg
    26221 ccagctgcgt tcttgaaatt ccgattgacc gccaaggtaa aggtcgcact agcaacattg
    26281 cttggtgtgt agcgtaattc aacatccctg gtcaatcgac ctatcagtac aacattattg
    26341 atcatgtaac tcctccaacg ctacccacct aaactgtggg tattttttag attcttcttt
    26401 ggtgcatttg taggcgtatc gctcaactgt caaataatca tctgcctgcc ccatggtaaa
    26461 agacaggaat agccctctga ctaagaagga atacttccac tttttaggct ctggcacatc
    26521 gaccagcagc acgcctagtt tttcattagt cattggttgc ctccctaaag tctggatgtt
    26581 ctgtcaattc aggattttca aaaatattcc ctaccttctc aaaaacgctg ctgacataat
    26641 aacaaacagg tccaaacatt ccatggtgca atcttacagg taacaattct ccagagtgca
    26701 ttctaaccac atctccttca aaaatctcct ggccgttgac atcaaacagc cctgtggatt
    26761 gcatgaggat tgcctcgcta aatggaatgt atcttcggac tacttttgag tagaaaggat
    26821 acactctttc ttctgtatac acaattgctt caacatcacc catagctttt ttgacggtat
    26881 cccacactct aaacttcggt atcattttct gtctccttca taaaatagcc aactagaaca
    26941 taatccaaac attatcttct gagcaagtgc cagttcacgt tgacgattag tgtcatcatc
    27001 attatcatat agccactctg ccaatttttc tccttgcggg aaatctgcca aaaatccgcc
    27061 atcgtaaaag tcaccaaacc attcatcgaa accggttgat tggtctttgt atcgttcgta
    27121 gtagtcaact gccacttgcg gcaccacaac cttctgcggt tcgtggattt agtcgattag
    27181 ttcaaaagtg ttatccaaaa aacttctgac atctgtatat aacgcttctg cttgcttttt
    27241 aaattcctgc ttattcattt gttttctcca catgttcctt cttccaacgt tctttctgag
    27301 caaatatctt ttccgcatcc agtcgccaag gatggttgtc gcttcgtttt tctggttgga
    27361 ccttgatgcc acggttgtaa gcgtacgcca ttagattttt cgccgtccca ccagtccgtt
    27421 ctgctatctc acggtatgat aacccttgtt ctgctaaata tctgatttca tcttcgtcgc
    27481 gataaatcag ctcatgcttg cgaataccta atcggacgac ttgtgtctta atagcacttt
    27541 tggtacgtcc caacctctcg caaacaactt ccataggcaa aatagggtag agttgtcgca
    27601 atttatcaat ctcatctggt gtccacgggc gtctgactaa cccacccttg ttggtcccgt
    27661 ttgtgagttt ccaaaccttc cctttcacac cacatactgt acgaccgagc aaagcagcca
    27721 cgtcttcata attgctctct ttatcttcga tagctagcca aagataatct agttcttctt
    27781 ctgtgtacaa tctgacaaga cccaaatttt ccccctttcc tgtgttgcgt atagataagc
    27841 gacaccattc ttcctgttaa cgtaataccg catctgccca tccttggact cgtacacatc
    27901 ctgcacctct cctagatgga tattgggctt ggtgttaatt ttgtgacagg ttgcgataat
    27961 ttctgcgact aacatctgtt tcctccagca ttctaagtct attttctaat ctaatctgta
    28021 aaaagaacgc ctttgttaat tcaggcgaca accgttcgta tttcctcttg tggaagagtt
    28081 ttagctcttc cgttgtcacc tcaaaaagat tatcaatcga accgttctgc cagtttccgt
    28141 ccaagtgaat aaaagccatt agaacaatcc ctgttcacgt aacgccacat actctttaag
    28201 cgtaggctgt agttcttccg gttcgatttg aaattctttt atccaagcac cactttgact
    28261 gatgtgtaaa tcttttttga cctcgataaa tgccattggc aataatagaa taattgggtc
    28321 atttaattgt tctccctctg cacgttccag aaatgcacag ataaaatctt gttctccacg
    28381 agcacctaca ctccaatgcg acttccttgt cccatagcgc ttatctatat gtaacgagct
    28441 atatttaaca tcaatcgtta catctttcag aataaaatca tagacaggat tatttttttg
    28501 aaaatagcga ttagcatcca ctgcatcagg taccaaagtc tgaaacaact cttcggcttg
    28561 tccacctaat tttgcacctt ttgaaccgta acgaatttta tcctgaattt tcaaacaacc
    28621 gctttttaaa agtttcaaat gagcaacatg aattggtaag cctgattgtt ttactgctgt
    28681 atgaaaatca ccacactcca tgtaaatatc tacaatgtca accattctct cctccaccta
    28741 acagcattct tggaggtatc acttccttgt tcgtgacctc tgataatgtc tcaactactc
    28801 gcaaagccaa ggcctgagtt ttcaggattt catctgtcac atgtaccata gctttgcttc
    28861 tagtgacttc caattccaat tcttcaggag ataaatcatc aaaacttaat ttctccagtt
    28921 gtgcaaccag tagattattc acatcttcaa ttgtgtttct gaccatctac ttcttcctcc
    28981 ctttcaacca ctccggcatc acatcgccga tattaatact ctcgtactgc tccctggtca
    29041 ccagaaactt accatacggc ttgacctcga catagtaatg tccgtcaagc acgtctttag
    29101 acgtgacctt tccgaacatc tctgtgccag cattgtccac ttgataaaca atgatttttg
    29161 gctgctcaat cttggcatct agcttgtcaa tcttgtagat gatcagcaaa gatgtcacga
    29221 ggattgatag taaaatgcaa aagttaccga tagctgtaaa aatctttctc acaagtccgc
    29281 ctccttcaca aatactccgt caatcatctt gccctttcgg tccttgattt cgtcataagc
    29341 gatttttaga caagtatcag ccgttgtgca attatggata gcgacagaat ggatgttgct
    29401 gtgtagcata atcaaatctg gcttgattag tggtgtcttg gtttcatcgt aaaatacatg
    29461 cttgtgtaat ttgttggcga gattgccaag actggcaacc attagcagca attccatttc
    29521 ttctggtgtc gctcgaatgt cggcaccatt cttgacctgc aattccagac cagtcaagac
    29581 aacctgcatg tcgcctaggg catctttaat caagtcagac tttcctttcg caactccttc
    29641 aaacagctca ccagcttcct ccatcaattt ctcgaactgc ttaactgggt ttgcttcgtg
    29701 taggttacgg tcaataaacc attgttggac cttttcatca agtgttttag tcattttgtt
    29761 cgttctcctt ttcttttgaa attgtaatca agtaataaca atcaactgcc ccataatcaa
    29821 tcctgatagt ttgacttctg attttcttgg ttgctataaa acgtagtcgc ttttctgctg
    29881 agttattttt cgcatgattt atgatagctt cagcagcgct ttcttttgta tcaaaatatc
    29941 cgatatggac tggttgatgt ccgttaatta tcattgttgc tgcatagttc atccttcctc
    30001 ctcaaccaaa taaaaattgc cataatcttt caaggctctg gaaacatgga tagcagcagc
    30061 acggctagca aactgcatag cctgtcgctc gttgccgtat tgaatatcaa tccctgtaca
    30121 gttgacccgt acttctcgga tgaaaggcct atcctgcttc gagccatgtt taagtttcac
    30181 cattttccat agcctccaac tcagcgtaca aatcagctag cacagcttgc ccttctgccg
    30241 tctgctcatt cttgacttct tcatttgccc aaacaggaac atttgtctgt gcaggctgtg
    30301 gaacccttgg caccatattc aaatacttgt caaaattcga ttctctgaac aaggtagatg
    30361 gctgtaggta cttctcccat tctgtaccag tccagttggc taccatgttg tcaatgacct
    30421 ttttaaaatc atccaacttg taaccctcgt tccacctagc ctgaataatt ttcttgttgc
    30481 tatttgactg ataccgataa gacttcccag ttgcagaatt tagatattcg ataatttctt
    30541 gaatcggaca tatattatat atatcttctt ctttatctat ttctttatct atatctagtg
    30601 cgttaccatg cgttactgta acgttacatg taacgttact atttgccagt tgtttctgct
    30661 tctcccgata atttgcgaca cgcttccgag cctgttccct ggccttttcc atgctttcga
    30721 cgctctgatg tttctcccag tttggaatgg tgatagcatt gttgataatc tcaatcatcc
    30781 caaactgttc aaacgtttga agtgcagctc taacagtgtt cagtggtctg cggaataaag
    30841 ttgccagcat ttcatctgtg tagtggatac ggtcattcat catcaagaca ccactataat
    30901 tctgcttgcc tgccagtgtc agcagcttaa accacaccac aataatcgtg tcagcttctg
    30961 gcaaggactc aatcagcaga attttctcgt catcgaaaat gtctgtgaca atcttaatcc
    31021 atttaattgc actagccatc attccctcct tgttacaatc aatctgtcaa tccgttctcg
    31081 aactgcatga cctggtatcc aatcgagttt gcgcattcgc ttgacatact ttacgtcaat
    31141 gtcgagcaac tttgctaact cattgtcatc aatatcagaa ttctgtaccc aaattgcata
    31201 gtctactcca gtattggtct ttagcgttga tactcttttg ggtactttgt gagcgaatat
    31261 tgatctacgt gtcatctctc tcctcccaca tctcagcatt gaccccctta ttccaaaggt
    31321 cctgctggta aaccctagcc acctgccagc tatcaaagca tttcttgtag tggtacttcc
    31381 tgcgaccacg tttgtttttc tttgctacaa cccaaaccat agctagacct cacgatctgc
    31441 caatagttca gcctggcact tgttgacatt ctccaaaaag tcaatccgtc tgcgtagctc
    31501 atcaatcagc ctagcctgac cgacacattc ctgatttttc agtaaggcca actttttgta
    31561 ttccttggcc gtgtgcctag cgttagccaa ttcaagttcc aacgcatgtt ggctttgagg
    31621 aatgtagtca tcttcctcca cactcaagaa cttcttcatc atgttccaaa atttcatatc
    31681 atcctccgta atatctgtga atttgcaagt atctcaaatt tcgctctggt tgcttttctt
    31741 cgactactgg ttccttaatc tcaatagtca ctggcttacg aaccagccaa aacaacaagg
    31801 gaaacaagat agcaatagca aacaaagcct gttcagttgt tagaaacaat tcttctgtca
    31861 tacagcaaca ccctttattc gtttcaatgt cttcattttt gacttacaat attccacatc
    31921 cctcttgtca aaacgataat gcgttcccac catgtgaaaa gggattttcc cagccttcac
    31981 tagatccata aacggattac ggctcatgcc cataatccta caggcttcgg ccaccccaat
    32041 agccctatca gctacctggg agggcttttt ctcaactgcg agctctttcc gcacttctcg
    32101 cagaacttca cgcacaatct cacgttttaa gctctcaaaa gcttccaaca tctcgttcat
    32161 acttcccaat cctttcaaaa tatgatataa ttcctttgtt gtttttagta agagcctgat
    32221 tgccgtcagg ctttttgcgt atcttcgttc aaaaacttat tgataaagta ggactgtcct
    32281 ttacctgtca tcttggtcgt cttgctgatc cgaatgctgc cattaggctc attatgtgtc
    32341 cgctccttga cctcaaacaa gctcatatcc atagacctct gggtcggcat attgtagctc
    32401 tcaccacgtt tccgaatgag gaagccatta ttacgcaacc actcaaacaa gcgattttgc
    32461 ccgatatcgt agccattctg acgcaaaatc ttggcaaagt ccccaatcaa gatagatgta
    32521 gcactagcct cgaccgcatt cgcaaacagc accttgggct tgtccgcctc aatctgtgct
    32581 tccaactgat gcaccttctt gtcggccaat agcagagcgc gagccataat cttctctgga
    32641 ctgttgaagt ccttttctat ttggataaaa tactgacgaa cctgcttgcc acggtcagac
    32701 cgttggatca tagcaatttc cttggccatg tccaacttga taatgtggtc aacagctcga
    32761 cgacctcccg tacttttttc caaatttgga agaaagtcct ggccttcgac aaatccatac
    32821 tcggtcatac ggtcaaacca agttgtatag ttagaatgaa cccccaaagc ctcatgcaac
    32881 tgccgaccag acacaacagg ctcttgattg tcattcacac tgacattgat aatttcgttc
    32941 atatacttcc cctccttatc tctccgagtg ccaacacagt ctcccacaca tctagtccct
    33001 caaggctatc tactaccagt tgactgagct ggtagttttt cttttgccag ttctggatca
    33061 gcttgctagt catccacttc ctccaccaca tgctgcactt ccacaacctc aacatgagcc
    33121 tgcttcaact ggagattttt agtcgcacag tattcaatca aataactaac tgcctcgctt
    33181 atcttaatat cgttcttgtt ggcaaagtca acaacaaatt cataagcctt ggcactaatt
    33241 cttactacct tttcaaaaac tttcatgata taatcctctt gtatctatat ttttgagcct
    33301 gattgccgtc aggctttttt tgcacccatc cagctcccca agacctgcca ggtctttttt
    33361 gttaaaagaa aacttaggag atttatggta tcgaaacgac tgatgttgcc tgacaagtcc
    33421 aaggcaactg gatggaaatg ataaaatttt gatataataa aaataaaaac gattggagaa
    33481 atattatgat atttcaagta aaaatagctt cttctgtttc taaatctgta actatcgacg
    33541 atatctgtcc aaattgtaaa aaaccaacta atccacatct tgtggactct tcttactttc
    33601 ctctcggtga agaaaaaaca agtttggtct taacattaag atgcttaggt tgtaagcact
    33661 tctggacaga ggaatttata gcaacaaggc atcagatcaa ttcctacacc gataaatacg
    33721 aaatcgaaca tcttaaagtc acgcctaacc tcccaagcga tatacccatt tctgacgatg
    33781 tagagttagt ttctccaatc gggaaacaaa tctatgtcca agccttaaaa gcagaacatg
    33841 agcaactcga ccacatagca ggaatcggct atcgaaaggc acttgagttt tttgttaaag
    33901 atttctctat tgtcacaaat cctgatgatg aagataaaat aattaaaatg cctttaaaac
    33961 aggttattga aaaatatatc aaggatgatg atcttaaaac atttgcactt gcatctgctt
    34021 atattggcaa tgatgaaggt cattactata gaaataatcc tgataaagat ttttctcacc
    34081 ttaagaatta ccttcacgga gttattcact acatggaaat gaagctcaat tttcttgatg
    34141 ctcaagagct tgtgaaccgt tcgaagaaat cttagaatca agttcatcca atttctcagc
    34201 tatataagtc acagtcctca gtatttcatt gagggctgtt ctttctaatt cgttcatgtc
    34261 attttccttt ctgtaaatgg cagagctggt gtgttggtta agacaaaccg tgtttctttt
    34321 tgcctatttc gataaggttg cgtcgaattt cttccgcttc tcccatatca acaccgaaaa
    34381 catcagcaac aattccagcc tgtccacgag ggtcattctt tatcctgttg cgtatcttat
    34441 tgtgaaattc aatcttttca acagtcttgt cgtagtccag cagaccattc tcatcaaaaa
    34501 tctcaaaact gataccgtgt tcatgggcag gagttttatc aaatacctcc ttatttggag
    34561 caagtagatg aatttcattg ccgtcatcat aaatgcgaaa attcgcaaaa tcaataagtt
    34621 ctttcataat tttttccttt cttttcagtc cttgactgac agctagcacg gtgatgccca
    34681 gtcaatgaac gaaaccgcca acgcaataaa aactcagaaa gcggaaaagg tgctgcgttg
    34741 gacaccgtac taggtgacaa tcaagaactg atagtgtgca atgctaaata gcagagctgg
    34801 tgtgtttatt acctttcatt ttgtgaggtt gtatttgtaa ataaatcgct aatctcttta
    34861 ttcaagattt tagcgatttt gtagcattca ctcaatttga aatcgttttg accaagttct
    34921 ttctggcggt atgccgtttc tgaaattcct aacttgtcag cgatgtcttt ttgagtgtat
    34981 ccagcttgtt ttcgagcctc atacaacaat aattgcaata accctcactc ctttccttct
    35041 ttttcctttc tgagtttctc cagcttttta tccaagtacc actttgtgat gtgcctaccg
    35101 ataaacatga gaacccataa acctgctaac caatacaaca ttgctttttc tggcgaatgg
    35161 tggtatactc aaataagaga ttggggcttt cgccccttgc tcttactttt ttagtttagc
    35221 ttgctcaatc ttgtggtcta ggatttgttt gtaccacaga cgagcttgcc ttaccaagcc
    35281 tagcactatc agaactgttc cgagttcgtc aggtgttagg ctttttagta tgtccatcat
    35341 tcgccgttcc tcctgtttta ttttcggtta attccttaac cttgactata ttatacctca
    35401 cattttgaaa ggtgtcaaca ctttttttgc gaaaacacaa aaaaaacttt tctttttgtg
    35461 aggtttgttg tataattagg taaacaaagg aggaatatct cgtgaacgac aaagaattat
    35521 caatttatgt aggtcaaaaa ataaaagatt ttcgtttatc tcgtaatatg acccaaaaag
    35581 aattggctga acgtatcggg atgggggata ctacaatagt taattatgaa aaaggtatcc
    35641 gaacacctaa aaaaaataca cttttcaaaa tatccgaagt gttaaaaact tctatcgatg
    35701 acttctttcc tcctatcacc cccacagccc ctaacagcct catagagcag atttcggaca
    35761 aggtggtgca attaaccgaa aaaggcaaaa aagatgtgct acggttcacc agtgaacttc
    35821 tggagcgtga agaggctgac cgcattatcc aggaagaacc actcttcaaa atctacttcc
    35881 gttctgctgc caaagcaggt ccgaaaggtt atggctacga tgactatgat gcagactttg
    35941 cctataccaa ccaaaagcca ccacggcacg atgtcgcaac cagagtggac ggcgattcca
    36001 tgaacccaga ctaccaagac ggcgacatcc tttacctaag agattacgga gccagccact
    36061 acaacggcga cgaatgcgtt gtggtcatag atgacaaatc atacttcaaa cgcctataca
    36121 ccaccgaaga cggcttgaaa ctggtatcca ccaacccaga caaagacgcc tacccagaca
    36181 tctttatcga cttcccacca agcgacggca gccacatcaa aatatttaac gtcgtcggca
    36241 gcttcacacc agtggagagg tagacccatg gtgattgagg agcgtaatgg gttgggggga
    36301 taatgtgaaa caataagctt gacaaaatat aaaagagact ctataataga atcatacgaa
    36361 gtggcccgga tgcccgatgc atcctaccga aagagtctca atttatttga ggctctttcg
    36421 tgctttataa ggagttacta tgaaaccatt ttctgatatt ggagagcaac ttcgcattct
    36481 tcaagaagat aaaaagctac tgatccaaga catggacaat gccatctttg cactaatgaa
    36541 ctgtggctac tatgaaatcg tcaatggcta caaaatcttt ctgctagacc caaaagaaaa
    36601 ggatgaagtg tttaagaaag gcgagacttt cgaacatctt gcctccctat ataatcttga
    36661 caaagagttg cggaattatg tcatgcaggc cacgttagag attgaaagtt cattgaaaac
    36721 agcccttgcc tacaccattg cagaagattt cggagtatac gaaattgatt atttaaatcg
    36781 caccaactac gttaagggaa aatggcaaaa acgccaccaa aactaccaac gggatcattt
    36841 gcttgatatg ctgaaagaca ttgctgccaa ccgtaaggtt gagccgctaa tctcctatag
    36901 aataaagcat gggcatatcc ctccttggat actcttcaaa gaagccacct ttgggaactt
    36961 cgtcaacctt ttcaaagtcc ttaaaggacc gcagaaaaac aaagtcattg cccactgtat
    37021 cggctcggac atcaatttac taacagaaga cgacaaaaga ctatttgggg aaatgctgga
    37081 cctcgttctc gctttcagga atagagcggc acacggcgga cgaattttta attacaaagc
    37141 caaaagaaac accgccttat cctaccactc aaaattccac ccacaaatag atatatcccc
    37201 tgccgactac cgacacggaa aaggacggaa tgacttctac acctttttct actcaatggt
    37261 cattttcgac aataaaaacg ggcataacta tttaaacttc tgtctctata aaattattga
    37321 acacgaaaag gattacccaa gcgacctcga aatattagaa aaacaaatgg gcttcccgca
    37381 aggcagactc tacaacgaga ttgagaaact tagacaaacc atcaatctct acagactact
    37441 caatgacaaa aactagttta tttgatacaa tatagttact aacctaggct tcacctagtg
    37501 caaatacgga gctggcacaa gctgccacga ccgagcggta actattcata gttgccgctt
    37561 ttattttaca aaaaacaaaa aaagccctac gctcaaattt tggtcgagga gagcgtaagg
    37621 cgaatcatgt atagtaaaaa cctgctttgc agtaggtctc tttactatac ccattttatc
    37681 atagaaatga ggttaaatca atggatataa agccatacaa aaagaacggc aagacctatt
    37741 acaagtttac gctatatgtc ggtcttgtcg atggaaaacg caaatacgtc aagcgtgcca
    37801 attttaaaac catttcagat gcacgagctg ccattctatc actccaggaa gaaataaata
    37861 gacccaaagg cgatatgacc ttccaagagc tgacagagaa atggctagtc atctacgaaa
    37921 ccgaagtcgc agaaagcacc tatctcaaga ccagcaggaa tatcaagcac cacatcaccc
    37981 ctactatcgg acacaggaga atatcagaaa ttaccgccct ggaactgcaa agccacacac
    38041 aacagtggtg ctcacaatta aaatacggca ggaagatact aggcttggtc aagaccattt
    38101 accgctacgc agtccgtatg ggctttgttg ctattagccc tgcagagagc gttacagctc
    38161 caaaactcaa gcgaaccatc agcacgacca aggactttta tgacaaacac gaattaagag
    38221 agttcatgca aagggtggag gcaacaggag acattcgcaa aatagctctt ttcagagtac
    38281 tagctttcac tggtatccgt aaaggggagc tccgtgcgct ccattgggat gatcattatt
    38341 caaagacctt gcgaattagc aaggcggtca caagaggttt tgctggtgaa gagatagggc
    38401 caaccaaaaa caaagccagt gaacgcttgg tcagcttaga cgataagaca gaccaaatct
    38461 tacaagaatt aaaacgacag taccctacta ctacacttat ctttgaaagt gaaacaggcg
    38521 gtatcctatc accaaccgac ccgagaagat ggctactgga aatcacagaa ggcacaagtc
    38581 taccagttat taacatccac ggctttcgcc acacccatgc cagtctaata ttcgacgcag
    38641 gcatgaccct caaacaagtc caacacagac taggacactc agacatgaaa acgaccatga
    38701 atgtctatac tcatattacc caatcagcag tggacaatat cggagaaaca ttctcaaaat
    38761 acttagattt ctaagtcaat aaactcacgt tttggtaatc actttggtaa tcactaaaat
    38821 gaaaaattgt gatattttgt aaaaacagaa aacaagaaaa acgttgattt aacaacgttt
    38881 ctgcaaagtt atgataagtt ataaaaacta tatatggagc tggtgggagt cgaacccacg
    38941 tccaaacacc tgctaactta ttcgtctaca accataggtt atgtcttgct ttaacttgaa
    39001 ctcgatacat aactcaaacc tagaccaagc gagtcagtaa atctcttttg gaactgcctg
    39061 actcaatccc aacgtagctt gctattttaa gaccaatcag caaacacaag caattcgcga
    39121 ctggtcacgc aggcaggtta ttaagctgct aatgcgtaag tgtttgtatt ttttgcagtt
    39181 atatttaact ggcattttta catctgccga tgagttgcag aacaagcctc ataatgcctg
    39241 tcgaa
//
LOCUS       DBNFCX010000009        38821 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.009, whole genome shotgun sequence.
ACCESSION   DBNFCX010000009 DBNFCX010000000
VERSION     DBNFCX010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 38821)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38821)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38821
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.009"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(515..910)
                     /locus_tag="AC1PJC_000358"
     CDS             complement(515..910)
                     /locus_tag="AC1PJC_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000282448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HIP6619399.1"
                     /translation="MYNKVIAIGRLTAQPELTQTPTGKNLTRVTVAVNRRFKTENGER
                     EADFLNVIFWGKLAETLVSYGSKGSLISIDGELRTRKYEKDGSNHYVTEILGQSFQLL
                     ESRAQRAMRENNTGDDLADLVLEEEELPF"
     gene            965..1510
                     /locus_tag="AC1PJC_000359"
     CDS             965..1510
                     /locus_tag="AC1PJC_000359"
                     /inference="COORDINATES: protein motif:HMM:NF022431.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2785 domain-containing protein"
                     /protein_id="HIP6619400.1"
                     /translation="MKEFLMEKIQTSQPYTDAELAWLLENIGHPDPTIRDELVYASFC
                     HIFLEGLITREQAQSLLQFSQETKPFSLEGPTQKRSFICLLYCLLLSVDNERDSVYFA
                     FLSTNDRELLFQQALDYLTIENDWSGYDEKLGWIHTAAHGADFLLAASCHNQFPAEKS
                     KEVWHKSLSTSCCMKKCQAKS"
     gene            complement(1709..2332)
                     /gene="ytpR"
                     /locus_tag="AC1PJC_000360"
     CDS             complement(1709..2332)
                     /gene="ytpR"
                     /locus_tag="AC1PJC_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011284429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtpR family tRNA-binding protein"
                     /protein_id="HIP6619401.1"
                     /translation="MIFTYNKEQVGDVLMVIVAEDKGQAVQFERKGKVARVFLAETGK
                     TVAWNIFEASSLVELTGNGQVFLTDEQVATLNAVLAEEGFTESLVNDNAPKFVVGQIV
                     ELVPHPDSDHLNICQVNVGDKTVQIVAGAPNAAQGLKTIVALPGAMMPSGSLIFPGKL
                     RGEDSFGMMCSPRELALPNAPQVRGIIELDNSAVVGEAFDPAKHWKG"
     gene            complement(2350..3306)
                     /locus_tag="AC1PJC_000361"
     CDS             complement(2350..3306)
                     /locus_tag="AC1PJC_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1002 domain-containing protein"
                     /protein_id="HIP6619402.1"
                     /translation="MKKSLGKILLAPVVLGLSLSLAPLVQAEIQTDVINEKWGKPTLV
                     YGGGLSDAQATEVNNLFGISDVNNVSRQVVVGADMDQYLGTSGADTASLYSSVLVQKQ
                     DAGKGVVVDIKTPQNITLITETQYANAAITAGATDVLIDVAAPIQVTGESALTGVYKA
                     LAVNGETVDTARTEVAQQELETVNEVATAHTGDTNFDSSALDKAVAEIKTALADYKQS
                     NGQVASEVDINTIINDVLAQNGLENVITADEISKLVTFAKAYQETSAIDSAEVAAQLN
                     QFKQQAEQQISEAYKNLQDSGILEKIGAFFENLWKGLTGLFA"
     gene            complement(3351..3671)
                     /locus_tag="AC1PJC_000362"
     CDS             complement(3351..3671)
                     /locus_tag="AC1PJC_000362"
                     /EC_number="1.8.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HIP6619403.1"
                     /translation="MIFPTNLEEVAALIEDGKPTVFLFVTTWCGDCHYIKPHVPAIEE
                     AFPNFRFVQLDRDDFMPLAQEWAILGIPSLVVLENGQEIGRFVDKNRKTKEEIMNFLS
                     GLGR"
     gene            complement(3668..3952)
                     /locus_tag="AC1PJC_000363"
     CDS             complement(3668..3952)
                     /locus_tag="AC1PJC_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4651 domain-containing protein"
                     /protein_id="HIP6619404.1"
                     /translation="MKKKKVALLAGLFGAGVLTASAQFYRKIQEDRKKAQALQEVRDF
                     FADLGEIATVYVDETASTQTTLIGGVVMEAGQVFLFENTQGSIQYREEER"
     gene            4099..5160
                     /gene="pepA"
                     /locus_tag="AC1PJC_000364"
     CDS             4099..5160
                     /gene="pepA"
                     /locus_tag="AC1PJC_000364"
                     /EC_number="3.4.11.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl aminopeptidase"
                     /protein_id="HIP6619405.1"
                     /translation="MTLFEKIKEVTELQSLPGFEGQVRNHIRQKITPHVDRIETDGLG
                     GIFGIKDTAVENAPRILVAAHMDEVGFMISQIKPDGTFRVVELGGWNPLVVSSQAFTL
                     QLQDGRTIPAISGSVPPHLSRGTNAPGMPAIADIIFDAGFANYDEAWAFGVRPGDVLV
                     PKNETILTANGKNVISKAWDNRFGVLMVTELLESLSGQALPNQLIAGANVQEEVGLRG
                     AHASTTKFNPDIFLAVDCSPAGDIYGDQGKIGDGTLLRFYDPGHIMLKNMKDFLLTTA
                     EEAGIKFQYYCGKGGTDAGAAHLKNHGVPSTTIGVCARYIHSHQTLYSMDDFLEAQAF
                     LQAIVKKLDRSTVDLIKNY"
     gene            complement(5205..6461)
                     /locus_tag="AC1PJC_000365"
     CDS             complement(5205..6461)
                     /locus_tag="AC1PJC_000365"
                     /EC_number="6.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004326 - tetrahydrofolylpolyglutamate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008841 - dihydrofolate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HIP6619406.1"
                     /translation="MNYQETRRWLSSRPASDLENGVARVSWLLGRLDNPQLQIPTVHF
                     VGTNGKGSTLNALQAILQSSDYTVGRFTSPSIIDFREQIVFEQEMISEEDFARIVTDL
                     QPLIEDLDQTAGLDAISEFEIVVVAMFVYFAHYQRPDILLVEAGMGGLQDATNVLAPL
                     AVVCPSIGLDHQAFLGETHAAISRHKVAVLRERVPLLYATDQPEVVAVFEDHASQLQS
                     PTYAVGREILLENSRAGFAVSSPLGRVEELTLQMQGRHQKVNAALAVTTAQLLSPDFP
                     KITNETISQGLSQAIWPGRLELIRPNLMIDGAHNNESIAVLTQLLEEKYADRDIEILF
                     AAINTKPVDQMLSQLSQFGPVSVTTFDDFRAVQLEDYLSGYERVQTYQEWLEQADLDN
                     PQKLYLITGSLYFITYVRKYILEELV"
     gene            complement(6517..7068)
                     /locus_tag="AC1PJC_000366"
     CDS             complement(6517..7068)
                     /locus_tag="AC1PJC_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate family ECF transporter S component"
                     /protein_id="HIP6619407.1"
                     /translation="MEKKIPKLTVQLLAAIAVTLALVMIVENYFSIRISDTLQVQFTF
                     IPNTILGAIAGPVWAAVFAAISDPIFVLFSGQTVLFTWILIEAVSAFIYGWFFYRKPL
                     DTKNKADWLYVAGVVVLIQVVISFIMTPIALHFHFGTPWIVLYSSRFIKAIFEIPLRI
                     VVTMLVLPSLQKIPELAKLMGIK"
     regulatory      complement(7111..7200)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:15.0:RF01831"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="THF riboswitches regulate genes encoding folate
                     transporters and folate metabolism; They are most commonly
                     found in Clostridiales and Lactobacillales; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="tetrahydrofolate"
                     /db_xref="RFAM:RF01831"
     gene            complement(7326..8513)
                     /locus_tag="AC1PJC_000367"
     CDS             complement(7326..8513)
                     /locus_tag="AC1PJC_000367"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006085 - acetyl-CoA biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HIP6619408.1"
                     /translation="MSKTIAINAGSSSLKWQLYQMPEETVLAAGIVERIGLNDSISTV
                     KYDGKKESEVLDIPNHTVAVKILLEDLLKHNIIAAYEEITGIGHRVVAGGEIFKESAV
                     IGPKEVEQIEELSALAPLHNPAHVAAMRAFEEVLPEVLNVAVFDTAFHTTMPKHAYLY
                     PIPQKYYTDHKVRKYGAHGTSHYYVAHEAAKVLGRPIEELKLITAHIGNGVSITANYH
                     GQSVDTSMGFTPLAGPMMGTRSGDIDPAIIPYLIANVDELKDAADVVNMLNKQSGLLG
                     VSGYSSDMRDIESGLEAKNPDAVLAYNIFIDRIKKFIGQYFAVLNGADAIVFTAGMGE
                     NAPLMRNDVVEGLSWFGVEIDPAKNVRGANGDISTPESKVRVLVIPTDEELVIAREVE
                     RLK"
     gene            complement(8563..9516)
                     /locus_tag="AC1PJC_000368"
     CDS             complement(8563..9516)
                     /locus_tag="AC1PJC_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HIP6619409.1"
                     /translation="MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVAGQH
                     ETDLIINNNKTLKQLDLTKEEWRRAYQFLLIKANQTEPMQYNHQFTPDSIGFILSFLV
                     DQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
                     ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPKEHTYAHHLLMEQSL
                     KYLEKDGFAILLAPNDLLTSPQSDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFV
                     LQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI"
     gene            complement(9573..9983)
                     /gene="comGG"
                     /locus_tag="AC1PJC_000369"
     CDS             complement(9573..9983)
                     /gene="comGG"
                     /locus_tag="AC1PJC_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence type IV pilus minor pilin ComGG"
                     /protein_id="HIP6619410.1"
                     /translation="MLLKKKVKAGILLYALLMLAVFSLLLQFYLHRQEAESRLVQVAR
                     QETTAYIMAQMVLDKVEQDLQVEKIVTGAVVNEKEANLTTGSKQKENRGRVSFQEGQA
                     RYQLKGDQLLVTVELTSDGLYTYQFPLGLSSEGG"
     gene            complement(9961..10395)
                     /gene="comGF"
                     /locus_tag="AC1PJC_000370"
     CDS             complement(9961..10395)
                     /gene="comGF"
                     /locus_tag="AC1PJC_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence type IV pilus minor pilin ComGF"
                     /protein_id="HIP6619411.1"
                     /translation="MLKSKIPAFTLLECLVALIILSGSLLVFEGLSKLLVQEAHYQGQ
                     TVQKEWLVFSSQLRSEWDQSDLVKVENGKVYVNKGEQALAFGKSRSDDFRKTNDRGQG
                     YQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS"
     gene            complement(10382..10675)
                     /gene="comGE"
                     /locus_tag="AC1PJC_000371"
     CDS             complement(10382..10675)
                     /gene="comGE"
                     /locus_tag="AC1PJC_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002282213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence type IV pilus minor pilin ComGE"
                     /protein_id="HIP6619412.1"
                     /translation="MVAIRKQKNKAYILLESLVALATLVTICSLILSAVDAGRRRQAW
                     ELEQQEVLNLAQMAVQTGQDNLALNGVTVQVKRTADRVAVFHEGKEVLSVVKK"
     gene            complement(10647..11054)
                     /gene="comGD"
                     /locus_tag="AC1PJC_000372"
     CDS             complement(10647..11054)
                     /gene="comGD"
                     /locus_tag="AC1PJC_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence type IV pilus minor pilin ComGD"
                     /protein_id="HIP6619413.1"
                     /translation="MLRRKNKAFTLLESLLTLFVVSFLAVSLSGTVQTVFRSVQEEIF
                     LWEFEAIYKDSQKLAASSHQKVNLAIGGQEVTNGYQAVEVPRNVEVLEGKTITFEEDG
                     GNSSLTKIRFRLSQKIVTYQLYIGSGRYKKTEE"
     gene            complement(11035..11316)
                     /gene="comGC"
                     /locus_tag="AC1PJC_000373"
     CDS             complement(11035..11316)
                     /gene="comGC"
                     /locus_tag="AC1PJC_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030420 - establishment of competence for
                     transformation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="competence type IV pilus major pilin ComGC"
                     /protein_id="HIP6619414.1"
                     /translation="MKKLVEMKVKGFTLVEMLVVLGIISLLLLLFVPNLSQQKDAIQK
                     KGDAAVVKVVESQMELYELEHDEEATVADLQAKGYITEKQAAEYAKAKK"
     gene            complement(11318..12355)
                     /gene="comGB"
                     /locus_tag="AC1PJC_000374"
     CDS             complement(11318..12355)
                     /gene="comGB"
                     /locus_tag="AC1PJC_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence type IV pilus assembly protein ComGB"
                     /protein_id="HIP6619415.1"
                     /translation="MCKLIAFLQQDISVFGRQKQKKLPLARQRKVIELFNNLFASGFH
                     LGEIVDFLKRSQLLADPYTQVLSDGLLAGKPFSSLLADLRFSDAVVTQVALAEVHGNT
                     SLSLSHIQSYLENVSKVRKKLIEVATYPIILLGFLLLIMLGLKNYLLPQLEEGNAATV
                     LINHLPTIFLSLSGLSLVAVLAGMVWFRKTSKIKAFSCLAALPFFGKLIQTYLTAYYA
                     REWGSLIGQGLDLPQIVGLMQEQQSQLFREIGQDLEQSLSNGQSFHEHIKTYAFFKRE
                     LSLIVEYGQVKSKLGSELTVYAAECWEDFFSRVNRAMQLIQPLVFLFVALMVVLIYAA
                     MLLPIYQNMEL"
     gene            complement(12267..13217)
                     /gene="comGA"
                     /locus_tag="AC1PJC_000375"
     CDS             complement(12267..13217)
                     /gene="comGA"
                     /locus_tag="AC1PJC_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence type IV pilus ATPase ComGA"
                     /protein_id="HIP6619416.1"
                     /translation="MIQEKARKMIEEAVADRVSDIYLVPRGECYQVYHRIMDEREFVQ
                     DLAEEEVTAIISHFKFLAGLNVGEKRRSQQGSCDYDYGSGEISLRLSTVGDYRGKESL
                     VIRLLYDNDKELKFWFEAAERLAEEIKGRGLYLFSGPVGSGKTTLMYHLARLKFPDKQ
                     ILTIEDPVEIKQDGMLQLQLNEAIGATYDNLIKLSLRHRPDLLIIGEIRDAETARAVI
                     RASLTGATVFSTVHARSISGVYARMLELGVSPEELNNALQGIAYQRLIGGGGVVDFAK
                     GNYQNHSADQWNVQIDRLFAAGHISLRQAETEKITLGSPA"
     gene            13303..14253
                     /locus_tag="AC1PJC_000376"
     CDS             13303..14253
                     /locus_tag="AC1PJC_000376"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S66 family peptidase"
                     /protein_id="HIP6619417.1"
                     /translation="MKKLKKGDHIRVVSPSSSIERIGGFEANLAAKERLEELGFKLSF
                     SEHYFENDMFNSAPIASRVADLEAAFADESVDAILTTIGGFNCNELLPYLNFDLIAQN
                     PKIFCGYSDTTALLNAIYAKTGMPTYMGPAYSSFKMVQAQEYQTEAWLKAVTQDSFDL
                     IPSPEWSSDAWYLPDAPRTFYPTEWKVYNPGQASGIAIGGNISTLNLLTGTEFAPRPD
                     EYILFLEEAEDDDYLIIARHLTALLQAYPNPQALVFGRFPKETKMTEEILLAILDKHP
                     ILKTIPVLYDLDFAHTQPLFTIRIGGHVELDTEAFSITFS"
     gene            complement(14288..14653)
                     /locus_tag="AC1PJC_000377"
     CDS             complement(14288..14653)
                     /locus_tag="AC1PJC_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1033 family protein"
                     /protein_id="HIP6619418.1"
                     /translation="MYQVIKMYGDFEPWWFLDGWEEDVTSRAAFDRYEDALNAFQKEW
                     VRLSEDFPMKKSKNGTMVAFWDESDQHWCEECDEYLQRYHSLMLVEARENLPAGFIKQ
                     PTQPRVRPCKLKQNNCVNE"
     gene            complement(14804..18451)
                     /gene="rpoC"
                     /locus_tag="AC1PJC_000378"
     CDS             complement(14804..18451)
                     /gene="rpoC"
                     /locus_tag="AC1PJC_000378"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed RNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HIP6619419.1"
                     /translation="MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPERD
                     GLFDEVIFGPTKDWECSCGKYKRIRYKGITCDRCGVEVTRAKVRRERMGHIELKAPIS
                     HIWYFKGIPSRMGLTLDMSPRALEEVIYFAAYVVIDPKDTPLEHKSIMTEREYRERLR
                     EYGHGSFVAKMGAEAIQDLLKQVDLPKEIAALKEELKTASGQKRIKAVRRLDVLDAFY
                     KSGNKPEWMILNILPVIPPDLRPMVQLDGGRFAASDLNELYRRVINRNNRLARLLELN
                     APGIIVQNEKRMLQEAVDALIDNGRRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLG
                     KRVDFSGRSVIAVGPTLKMYQCGVPREMAIELFKPFVMREIVARDIAGNVKAAKRLIE
                     RGDDRIWDILEEVIKEHPVLLNRAPTLHRLGIQAFEPVLIDGKALRLHPLVCEAYNAD
                     FDGDQMAIHVPLSEEAQAEARILMLAAEHILNPKDGKPVVTPSQDMVLGNYYLTMEDA
                     GREGEGMVFKDADEAVMAYRNGYVHLHTRVGIATDSLDKPWKDNQKHKVMMTTVGKIL
                     FNAIMPEGLPYLQEPNNANLTEGTPDKYFLQPGSDIKAAIAELPINPPFKKKNLGNII
                     AEIFKRFRTTETSALLDRLKDLGYYHSTLAGLTVGIADIPVIDNKAEIIEESHERVEQ
                     IKKQFRRGMITDDERYAAVTDEWRSAKEKLEKRLVEKQDPKNPIVMMMDSGARGNISN
                     FSQLAGMRGLMSAPNGRIMELPILSNFREGLSVLEMFFSTHGARKGMTDTALKTADSG
                     YLTRRLVDVAQDVIIREDDCGTDRGLDIRSITDGKEMIEPLEERLQGRYTKKTVKHPE
                     TGAVIIGPNQLITEDIAREIVNAGVEQVTIRSVFTCNTRHGVCRHCYGINLATGDAVE
                     VGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNSDITQGLPRVQEIFEARNPKGEAVI
                     TEVKGEVIAIEEDASTRTKKVFVKGKTGEGEYVVPFTARMKVEVGDQVARGAALTEGS
                     IQPKRLLEVRDVLAVETYLLSEVQKVYRSQGVEIGDKHIEVMVRQMLRKVRVMDPGDT
                     DLLMGTLMDITDFTDANAEVVIAGGIPATARPVLMGITKASLETNSFLSAASFQETTR
                     VLTDAAIRGKRDNLLGLKENVIIGKIIPAGTGMARYRNLEPQAINEVEIIEDTVAEEL
                     AAEAELEAVTE"
     gene            complement(18629..22201)
                     /gene="rpoB"
                     /locus_tag="AC1PJC_000379"
     CDS             complement(18629..22201)
                     /gene="rpoB"
                     /locus_tag="AC1PJC_000379"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed RNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HIP6619420.1"
                     /translation="MAGHEVQYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFQDFLDYG
                     LKEVFEDVLPVSNFTDTMELEFVGYELKDPKYTLEEARAHDANYSAPIYVTFRLVNKE
                     TGEIKTQEVFFGEFPIMTEMGTFIINGAERIIVSQLVRSPGVYFNDKVDKNGKVGYGS
                     TVIPNRGAWLELETDSKDIAYTRIDRTRKIPFTTLVRALGFSGDDEIFDIFGDSELVR
                     NTIEKDIHKNPADSRTDEALKEIYERLRPGEPKTAESSRSLLTARFFDPRRYDLAPVG
                     RYKINKKLNLRTRLLNQTLAEHVINGETGEIVLEAGTVLSRDVLEKVEAQFDELNLVE
                     YIPNDNAVLLEPVLLQKFKIVAPKDPERVVTVIGNANPAENVRTVTPADILAEMSYFL
                     NLAEGLGRVDDIDHLGNRRIRAVGELLANQVRIGLTRMERNLRERMSVQDNEVLTPQQ
                     IINIRPVTAAIKEFFGSSQLSQFMDQHNPLSELSHKRRLSALGPGGLTRDRAGYEVRD
                     VHYTHYGRMCPIETPEGPNIGLINNLSSYGHLNKYGFIQTPYRKIDRATGTVTNEIVW
                     LTADEEDAYIVAQSTSPLDENNRFVDKIVMGRHQGNNQEFPADSADFMDVSPKQVVAV
                     ATACIPFLENDDSNRALMGANMQRQAVPLIDPKAPYVGTGMEYQAAHDSGAAIIAQHD
                     GKVVYADADKVEVRREDGSLDVYHISKFRRSNSGTAYNQRTLVKLGDVVEKGDFIADG
                     PSMENGEMALGQNPIVAYMTWEGYNFEDAVIMSERLVKDDVYTSVHLEEYESETRDTK
                     LGPEEITREIPNVGEDALRNLDEMGIIRIGAEVKEGDILVGKVTPKGEKDLSAEERLL
                     HAIFGDKSREVRDTSLRVPHGADGVVRDVKIFTRANGDELQSGVNMLVRVYIAQKRKI
                     KVGDKMAGRHGNKGVVSRIVPVEDMPYLPDGTPVDIMLNPLGVPSRMNIGQVMELHLG
                     MAARNLGIHIATPVFDGASSEDLWSTVKEAGMDSDAKTILYDGRTGEPFDNRVSVGVM
                     YMIKLHHMVDDKLHARSVGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASNVLQ
                     EILTYKSDDVTGRLKAYEAITKGKPIPKPGVPESFRVLVKELQSLGLDMRVLDEDNNE
                     VELRDLDEGEDDDIIHVDDLEKARAKAAADAAAAFAAEEAEGKE"
     gene            complement(22658..25081)
                     /gene="pbp1b"
                     /locus_tag="AC1PJC_000380"
     CDS             complement(22658..25081)
                     /gene="pbp1b"
                     /locus_tag="AC1PJC_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein PBP1B"
                     /protein_id="HIP6619421.1"
                     /translation="MATKSDKQDFKKKISALGLGDAVGVFLRTLKLLFNSVAVLVFLF
                     GLFGAGIGIGFVVSLFDDVKIPKTEELVAKVSEVSRISTVTYSDGSLVSEVNSDLLRV
                     PITSEEVSNYLKQAVIATEDETFETHNGVVPKAVLRAALGSVGLGSSSGGSTLTQQLI
                     KQQLVGDAPTFTRKANEIVSALALERNMTKEEILTIYLNVSPFGRNNQGRNIAGVEAA
                     AQGIFGKPAKDLTVPQAAFIAGLPQSPIVYSPYASDGTRKSDEDMVYGIERYQDVLFN
                     MYRASFLTKEEYETYKAYDIKQDFIAPAPVMADTKDYLYYEVMEEAQEVMFDYLVKRD
                     KVSENDLKNDETKASYEELAKQELSQGGYTIKSTVDQGIYAAMQSVVANYGSVLDDGN
                     EYVETGSVLIDNATGAILGFVGGRDYATNQNNHAFDTLRSPASTIKPLLAYGIAIDQG
                     LIGSASILSDYPTNFSSGQPIMYGSGRGTGMMNLQTAIDRSVNIPAFWTYKMMRNAGV
                     DAKAYMDKMNYHIPMYDIESVPLGGGVEISVLTNTNAYQTLANGGVYNKHYIVESITA
                     SDGTVVYQHEAAPVQVYSKATASIMNQLLRQVVNSGYTTTFKSRLSGLNPQAASSDFV
                     GKTGTSNEVNDVWLMLSTPRVTLGTWAGNDDNSEMYVWTGYHNNSQYVAHMVDALYNV
                     NADMFAGKFELDSSVIASSVVASTGQRAGTTQVNGRQVTVGGAMTTSYWAKNGAPVTS
                     YNFMVGGTDSDRVQAWNTIIGSQTPTSSSSTQRSSSTRSSTGSSANNTNQSSETQTAT
                     SEQANNDSP"
     gene            25235..26491
                     /gene="tyrS"
                     /locus_tag="AC1PJC_000381"
     CDS             25235..26491
                     /gene="tyrS"
                     /locus_tag="AC1PJC_000381"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011184085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HIP6619422.1"
                     /translation="MNIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSL
                     HLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVTKIQ
                     GQLSRFLDFENGDNKAEMVNNYDWFSDISFIDFLRDVGKYYTVNYMMSKDSVKKRIET
                     GISYTEFAYQIMQGYDFYELNDKHNVTLQIGGSDQWGNMTAGTELLRRKADKSGHVMT
                     VPLITDSTGKKFGKSEGNAVWLDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDE
                     IAEIEKQFDAARHERLAQKILAKEVVTLVHGEEAYNQALNITEQLFAGNIKNLSAKEL
                     KQGLSNVPNYAVQAEDNLNIVELLVTSGIVNSKRQAREDVQNGAIYVNGERVQDLDYT
                     LSDSDKIDGELTVIRRGKKKYSVLTY"
     gene            26549..26926
                     /locus_tag="AC1PJC_000382"
     CDS             26549..26926
                     /locus_tag="AC1PJC_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HIP6619423.1"
                     /translation="MTCIFCHQIEEIDILYQTEHFKVVWDIDPVQTGHLLIISKKHYD
                     TLSQISPIIRYELSDLEVFLTDKLCQALAIDGVTIACNDRLFDADTHFHLHLIPRFQS
                     DGFWDQISLAQVQLDLNAFLKAL"
     gene            complement(27219..27428)
                     /locus_tag="AC1PJC_000383"
     CDS             complement(27219..27428)
                     /locus_tag="AC1PJC_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HIP6619424.1"
                     /translation="MKQTLKLKNLSCQNCVKHVTNHLLDLDGVEEVKIQLEEQLAEVE
                     TSVAYDLEQYQEVLDDTIYEVEELI"
     gene            complement(27770..28240)
                     /locus_tag="AC1PJC_000384"
     CDS             complement(27770..28240)
                     /locus_tag="AC1PJC_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006825 - copper ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CopY/TcrY family copper transport repressor"
                     /protein_id="HIP6619425.1"
                     /translation="MEQTISAAEWQVMRVLWAHPGATSQEIIQALQEGFDWQATTIKT
                     LLGRLRKKNYLRMAKETSKYHYYPLISEEEHLQGQVELLLATICSTKQGQLVEKLLDT
                     GAFSKKSLENLASKISQLQRTAPEQIACRCLAGQCTCGHHHTLRKSTSDVVDLT"
     gene            complement(28343..29854)
                     /locus_tag="AC1PJC_000385"
     CDS             complement(28343..29854)
                     /locus_tag="AC1PJC_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000724070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein
                     AdcA"
                     /protein_id="HIP6619426.1"
                     /translation="MKKIGLLFLSASALLLGACGNSTASEDGKLNIVTTFYPVYEFTK
                     QVAGDEANVDLLVKAGTEVHGYEPSAKDIARIQEADAFVYENENMETWVHDVEGSIDT
                     EKVNIISATEGMLLLPGGEEEHEGHDHSGEGHSHAYDPHVWLSPERAITLVENIRDSL
                     VAKYPEKKDAFETNAAAYIEKLDALDAKYSETLSAAKQKYFVTQHTAFAYLALDYGLK
                     QVSITGVAADEDPTPSRLAELTEYINKYGIKYIYFEENASKSVAETLAKETGVQLDVL
                     NPLESLTDEDMKNGKDYISVMEDNLTALEKTTSQEGSEILPEEGAETAQTVYNGYFED
                     SAVKDRTLSDYAGEWQSVYPYLLDGTLDQVWDYKAKIKGGMTAEEYKAYYDTGYKTDV
                     DQINITDNTMEFVVGDKKEKFTYKYVGYKILTYKKGNRGVRFLFEATDANAGNYKYVQ
                     FSDHNIAPVKTGHFHIYFGGESQEKLLEELENWPTYYPVGLTGLEIGQEMLAH"
     gene            complement(29864..30676)
                     /locus_tag="AC1PJC_000386"
     CDS             complement(29864..30676)
                     /locus_tag="AC1PJC_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HIP6619427.1"
                     /translation="MFDLSVFHYDFMQRAFLAIIAMSLFSPILGVFLILRRQSLMSDT
                     LSHVSLAGVAFGLVLGISPTLSTVLVVIVAAVFLEYLRTIYKNFMEIGTAILMSTGLA
                     ISLIVMNKSGGKSGLSLEQYLFGSIVTISQEQVIALFTIAVIVIVLTLLFLRPMYILT
                     FDEDTAFVDGLPVRAMSIAFNVVTGVAIALMIPAAGALLVSTIMVLPASIALRLGKSF
                     KAVIFTGMGIGFFGMVMGLLTSYYAETPASASITLIFISIFILVNIVQKLKK"
     gene            complement(30669..31373)
                     /locus_tag="AC1PJC_000387"
     CDS             complement(30669..31373)
                     /locus_tag="AC1PJC_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HIP6619428.1"
                     /translation="MRYITVEDLSFYYDKEPVLEHIHYYLDSGEFVTLTGENGAAKTT
                     LIKATLGILKPKQGKVSIAEKSIKGKKLRMAYLPQQIASFNAGFPSTVYEFVKSGRYP
                     RQGWFRRLTAHDEEHVRISLESVGMWEHRDKRLGALSGGQKQRAVIARMFASDPDIFI
                     LDEPTTGMDAGTKDAFYQLMHHSAKKHGKSVLMITHDPDELNKYADRNIHLVRDQQSP
                     WRCFNVHEADEEVADV"
     gene            complement(31374..31817)
                     /locus_tag="AC1PJC_000388"
     CDS             complement(31374..31817)
                     /locus_tag="AC1PJC_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent MarR family transcriptional
                     regulator"
                     /protein_id="HIP6619429.1"
                     /translation="MNRIALEIEKYLHEIVLSSENQLEILVGSCQSTVKLTNTQEHIL
                     MLIEKAAYTNTEIAKELNVSQAAITKATKSLVAQGLLVAVRDDKDARIVRFSLTEAAK
                     PIAAEHAHHHAHTLEAYEELLENYSLEEQESIARFLSELVEKIRK"
     gene            complement(31987..33084)
                     /locus_tag="AC1PJC_000389"
     CDS             complement(31987..33084)
                     /locus_tag="AC1PJC_000389"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619430.1"
                     /translation="MKKKLLRLGFVALSVLVLTACQMGTKEYLSVSFKGYDGYGTATV
                     SLDREELIAKLYGKDATDEEQDAVHDGVSVSVDGSEALSNGDKVKVTVDVDKESAVAS
                     KIKSETYTYDVSGLTETTEISSQDLVKKLAVTYTGISGQADYPEISIDSTILYPIGEN
                     GDDILKPSASNSTPISNGDMIAFSVEKAELAMNTGYVLTDDKEISLEVSGLDKIPDTV
                     SEIKNLADLLVIAQEQAEKDFAEKNLTSQYSLKRHHIFYRHDYQETKGWKNSYYGDLA
                     IVYEYVNAKEDSFVKTSTDFYVYNFSKLIIDKDGIVTLEAPSELDKDKMVKLSAQSDH
                     FYRDSIDDVYASLTNLEYRDVTTEAESVVNR"
     gene            complement(33124..33954)
                     /locus_tag="AC1PJC_000390"
     CDS             complement(33124..33954)
                     /locus_tag="AC1PJC_000390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619431.1"
                     /translation="MAEQQNINQFGREELIDILQYLYVQIDEFFTIKNKMSSIVEQTI
                     STRVKQATTAKYNRNGNIGGIIFALMGVVELGNNFFNALFMMGVMYLFGQAAVRLFMW
                     LMARPTNKKHSAFGLNYTVNVLSKKQLEKVTQEATVEAEHSQEYQSLLADKLALESNQ
                     TLLYFLSLIPDNFANLTDFAGMLVLLQDFRATNFQEAANLWRTEQHQQSVMNQQKKMA
                     EQLARSNAQISQLRDQAERLRKGQAHLEDAAARAAIQNARANEKLANMERYGVHATIR
                     "
     gene            complement(33961..37074)
                     /locus_tag="AC1PJC_000391"
     CDS             complement(33961..37074)
                     /locus_tag="AC1PJC_000391"
                     /inference="COORDINATES: protein motif:HMM:TIGR04320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEC10/PgrA surface exclusion domain-containing
                     protein"
                     /protein_id="HIP6619432.1"
                     /translation="MGKKLIKSTAIGVATLSSFVIANGVHAEEAVNTPTSPVESPEVS
                     LTASGVGIEMVSGVIVTNGTAVVTETPTEATVDQAATIKTAADQAVTDQTAVVADATV
                     AEEAAAEAVDTATGAVADAEASKAEATDENIAKAEEAVEDTKTAISEAESNANQAAQN
                     TAAAEAKVDEAQATVNSDQAAIDAQQTVVDNAKTAVDNAQAVLDGTGAAAIIAERDDA
                     QADLTQAQSDETKAQSDLTKAQEADAKKASDLATAKETETVQSATADKTASDLAQAQA
                     DATKAAADLVNANTAVDKAQKALDGTGAAAIIAEHDDAASDLTQAQADETKAQSDLTV
                     AQVADAKKASDIASLTQTQTQQQATANQTAAALAQAQADAKTKAAAKTVADNKVAELK
                     ANIAAFDNLTTPTLSQDVIDAYKKFANDDSQVNKDALFDAINTWYTTDMVGYTKTMVT
                     PVDTTVVDPANMTEEQVTALSHYYVHIGNAIRKQIWGANNEDFVVTKDAVQAAMQIAK
                     NYTVENDNTGDHSYTALENDGNTNVNYASEAISYISSKTTTMTELYRKIYRMSIDTWA
                     GDYNQDYAHITNEFWTRSISSSGSSSTTKLSGAFVTSVTLDGFGRSHEIQFLDNGGNT
                     IASPYDTTALKAQLATAKTTQAQATAANTQAQSTLASATTANQQAQSALQATTNQLNT
                     LKATADQTPAAQAKLAVATATRQAAETRLATAQQAVDNLNADVATKTKALEDAKAVQT
                     QAVATDASAKQALVQATTANDNAQTALTATRATIASLEAIADQTPAAQTKLAVATATR
                     QAAETRLTNAQQAVDNLNADVATKTKALEDAKTQLAAEEAKLAQLKAAKSTSEVVLAE
                     AQSKVKVLKAEEAKIADEITVLKAQLTEQVAKLVALKNADQVLADAQAELAKAIEAHT
                     AAKATLDAEIDKLDQLLKNQRDAKAQYEAVKEAYTQAQIVAQRQAINDTGGQPIAITD
                     KVGKIAGYFDGNQTAGTKLQPITYSRVEKYRQLPQTGSQESLLVLLGYTALAGLGLGY
                     AKKRRRG"
     gene            complement(37555..37638)
                     /locus_tag="AC1PJC_000392"
     tRNA            complement(37555..37638)
                     /locus_tag="AC1PJC_000392"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37602..37604),aa:Leu,seq:caa)
     gene            complement(37650..37721)
                     /locus_tag="AC1PJC_000393"
     tRNA            complement(37650..37721)
                     /locus_tag="AC1PJC_000393"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37687..37689),aa:Gln,seq:ttg)
     gene            complement(37733..37805)
                     /locus_tag="AC1PJC_000394"
     tRNA            complement(37733..37805)
                     /locus_tag="AC1PJC_000394"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37770..37772),aa:His,seq:gtg)
     gene            complement(37813..37883)
                     /locus_tag="AC1PJC_000395"
     tRNA            complement(37813..37883)
                     /locus_tag="AC1PJC_000395"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37849..37851),aa:Trp,seq:cca)
     gene            complement(37891..37971)
                     /locus_tag="AC1PJC_000396"
     tRNA            complement(37891..37971)
                     /locus_tag="AC1PJC_000396"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37935..37937),aa:Tyr,seq:gta)
     gene            complement(37992..38064)
                     /locus_tag="AC1PJC_000397"
     tRNA            complement(37992..38064)
                     /locus_tag="AC1PJC_000397"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(38029..38031),aa:Phe,seq:gaa)
     gene            complement(38080..38153)
                     /locus_tag="AC1PJC_000398"
     tRNA            complement(38080..38153)
                     /locus_tag="AC1PJC_000398"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(38117..38119),aa:Met,seq:cat)
     gene            complement(38163..38252)
                     /locus_tag="AC1PJC_000399"
     tRNA            complement(38163..38252)
                     /locus_tag="AC1PJC_000399"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(38214..38216),aa:Ser,seq:tga)
     gene            complement(38261..38332)
                     /locus_tag="AC1PJC_000400"
     tRNA            complement(38261..38332)
                     /locus_tag="AC1PJC_000400"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(38297..38299),aa:Glu,seq:ttc)
     gene            complement(38339..38412)
                     /locus_tag="AC1PJC_000401"
     tRNA            complement(38339..38412)
                     /locus_tag="AC1PJC_000401"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(38376..38378),aa:Ile,seq:gat)
     gene            complement(38443..38513)
                     /locus_tag="AC1PJC_000402"
     tRNA            complement(38443..38513)
                     /locus_tag="AC1PJC_000402"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(38479..38481),aa:Gly,seq:tcc)
     gene            complement(38519..38591)
                     /locus_tag="AC1PJC_000403"
     tRNA            complement(38519..38591)
                     /locus_tag="AC1PJC_000403"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(38556..38558),aa:Val,seq:tac)
     gene            complement(38597..38712)
                     /gene="rrf"
                     /locus_tag="AC1PJC_000404"
     rRNA            complement(38597..38712)
                     /gene="rrf"
                     /locus_tag="AC1PJC_000404"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:15.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
BASE COUNT        10768 a         9317 c         7700 g        11036 t
ORIGIN      
        1 gactggtcaa aaagagttcg tcaacaagtc tttatttcta gttgttgagc tgaaacagtc
       61 tatccccaga ctgtttcact cccacccccg catagctcca acagtcagag tagtgactgt
      121 tggaggttgg aaatgaagcg aactttgttc gcaacagtcg taatggtcag atttggagtg
      181 tgaaacacga acaaaactgc caatcaacca ctgcgctgag atgttgacac cagacctgag
      241 aagaggagtc ttgccttttg ctcaactgcc tatctactct ggctagtctg gatatttttc
      301 tttagccacc ctcattacat catctttttc ttttatgttg tcatcctatt gtcactgatt
      361 gttatgctag tagaatggtg gaaatataga aaataagtag caaaaaacac caactttcgt
      421 cggtgttttt aaggagatat gaaaaatatt taggattgac tatagtatag cctatttttc
      481 aatacgctcc atcggtcttg ggactgattt catcttaaaa cggtaattcc tcctcttcca
      541 gaaccaagtc agctaggtca tcaccagtat tgttttcacg catggcacgt tgggcacggc
      601 tttcgagcaa ctggaaggat tgtcctaaga tttctgtcac atagtggttg ctgccgtctt
      661 tttcgtattt tcgcgttcgc aactcaccgt caatagaaat cagactaccc ttgctaccat
      721 aggagacaag tgtttccgcc agtttgcccc agaaaataac attaagaaaa tctgcttcac
      781 gctcaccatt ttcagtctta aatcggcgat tgactgcgac tgttacacga gtcaaatttt
      841 tgccagttgg tgtttgagtc agttcgggtt gggccgtcaa gcgaccgatt gcaataactt
      901 tattatacat tttatatcct cctacttatt tattcgtaga aggattagaa aaggagcgaa
      961 aatcatgaaa gaatttttga tggaaaagat acagacctcc caaccatata ccgatgccga
     1021 actggcttgg ttgttggaaa acatcggcca tccagaccct actatacgcg acgaactggt
     1081 ctatgctagt ttttgccata tctttttgga gggcttgatt acaagagaac aagcacagtc
     1141 gctactgcaa ttctctcaag aaaccaagcc attttcccta gaaggcccca cacaaaaacg
     1201 aagttttatt tgcttacttt actgtctttt gctatctgtt gataatgagc gagattctgt
     1261 gtactttgca tttttaagca ctaacgaccg tgaactactc ttccagcagg ccttggatta
     1321 tttgacgatt gaaaatgact ggtctggcta cgatgaaaaa ctcggttgga tccataccgc
     1381 tgcccacgga gcagattttc ttctggccgc aagctgtcat aatcaatttc ccgctgaaaa
     1441 aagtaaagaa gtctggcaca aatccctgtc tacctcctgc tgcatgaaaa agtgtcaagc
     1501 caagagctga cggaatggat tagcaagctg gactttccaa atcaagaacc agtagactac
     1561 ttccggtggc tcaatcttca acatttcctg tccagtcttt acttccaact taggtcacat
     1621 catgcatcga ccgaagaaat cgaacaggca attgaaggaa aaattgaacc agcataaaag
     1681 aattggccac ctgaccaatt ctttttttct atcccttcca gtgtttagct ggatcaaaag
     1741 cttctccgac cactgcggag ttatctaatt cgataatccc acggacttgt ggtgcgtttg
     1801 gcagtgccaa ttcacgcgga ctacacatca taccaaagct atcttcacca cgcaacttcc
     1861 ctgggaaaat gaggctaccg ctcggcatca ttgcccccgg aagagccaca atggttttca
     1921 atccttgggc agcatttggg gcaccagcta cgatttgcac tgttttgtca ccaacattga
     1981 cctgacagat attgaggtgg tcgctgtctg gatgaggaac caattccaca atctgaccga
     2041 ctacgaactt tggagcattg tcgttaacca agctttcagt aaaaccttct tctgctaaaa
     2101 cggcattcaa ggtcgcaact tgctcgtctg tcaagaaaac ttggccattt ccagtaagct
     2161 caaccaaact tgatgcttca aagatattcc aggccactgt ttttcctgtt tctgctagga
     2221 aaacacgggc caccttgccc ttgcgttcaa actggacagc ttgtcccttg tcttcagcca
     2281 caatcaccat aagaacatcg ccgacctgtt ccttattgta tgtaaaaatc atttcttttc
     2341 atttctcctt tatgcaaata gaccggtcaa gcctttccaa agattttcaa agaaggcacc
     2401 gattttttct aaaatccctg aatcttgtag attcttataa gcttctgaaa tttgttgctc
     2461 cgcctgttgc ttgaactggt tgagctgagc ggcaacctca gccgaatcaa tggcagaagt
     2521 ttcctgatag gctttggcaa atgtgactag cttagaaatt tcatctgctg tgatgacatt
     2581 ttccaaaccg ttttgggcca aaacatcatt gatgatggtg ttgatgtcaa cctcagaagc
     2641 cacctgacca ttggattgct tgtaatccgc aagagctgtc ttgatttctg ccactgcctt
     2701 atccaaggcc gaactatcaa aattagtgtc acctgtgtga gccgttgcca cttcattgac
     2761 tgtctctagc tcctgttgag ctacttctgt ccgagcggta tcaactgttt caccattgac
     2821 tgcaagagcc ttgtaaacac ctgtcagagc ggactctccc gtcacctgaa tgggtgccgc
     2881 aacatcaatc aagacatctg tcgcaccagc tgtaatagcc gcattggcat actgcgtttc
     2941 ggtaatcaag gtgatgttct gtggcgtctt aatatccacc acaacccctt tgccagcgtc
     3001 ctgcttttgc accaagacag atgaatagag ggaggctgtg tccgctccag atgtacctaa
     3061 atattggtcc atatccgcgc caacaaccac ctgacggcta acattattga catccgaaat
     3121 accaaataga ttgttaacct ctgtcgcctg cgcatctgac aaacctccac cgtagactag
     3181 tgttggcttg ccccattttt cattgataac atctgtttga atctcagcct gcaccaaggg
     3241 agcaagactc aaactcaacc ccagcaccac aggtgctaga aggatttttc ctagtgattt
     3301 cttcatgttc tttcctttct tttgggaaat ggcagagctt ctctgctaat ctatctaccc
     3361 agtccagata agaagttcat gatttcttcc ttggtcttac gattcttatc gacaaaacga
     3421 ccgatttcct gaccattttc caaaacaact agacttggaa tgcctaaaat agcccattcc
     3481 tgtgccaaag gcataaagtc atctcgatcc agttgcacaa aacggaaatt tggaaaagcc
     3541 tcttcgatag ctggcacatg cggtttgata tagtggcagt ctccacacca agtcgtcaca
     3601 aatagaaaaa cagtcggctt gccatcttca atcaaggcag ctacttcttc aagatttgtt
     3661 ggaaaaatca tctttcttcc tccctgtact gaatagaacc ttgggtattt tcaaataaaa
     3721 acacctgtcc tgcctccatc acaacccctc cgataagagt ggtctgcgta gaagccgttt
     3781 catccacata gaccgtggca atctctccta aatcagcgaa aaagtcacgc acctcctgca
     3841 aggcctgtgc ttttttacgg tcttcttgga ttttacggta aaattgagca ctagcggtga
     3901 gcacacctgc cccaaataag cctgctagta aggctacctt tttctttttc atgttgacta
     3961 ttttatcata attcctcgga attttcccaa aaatgccatt ggacttgtga cagctgagaa
     4021 gatccttttg acataatagt aggacaagtc tagctcttcg tgataaaata gtagtaatca
     4081 tgtcatggag gaagaagaat gactcttttt gaaaaaatta aagaagttac agaattgcaa
     4141 agcttaccgg gatttgaagg acaggttcgc aaccacatcc gccaaaaaat cacgccacat
     4201 gtagaccgca tcgaaacaga tggactaggt ggaatttttg gtatcaagga tacggctgtt
     4261 gaaaatgctc ctcgtatcct agtagccgcc cacatggatg aggttggctt tatgattagc
     4321 caaatcaagc cagacggtac tttccgtgtt gtcgagctag gtggctggaa tcctctggtt
     4381 gtgtctagcc aagccttcac tcttcagttg caggacggtc gtaccattcc agccatctca
     4441 ggctcagtac cacctcacct ttcacggggg actaacgctc ctggcatgcc tgccattgct
     4501 gatattattt tcgatgctgg ttttgccaat tatgacgaag cttgggcgtt cggcgttcgt
     4561 ccgggggatg tcctcgttcc caaaaatgaa acaattctaa cagccaacgg aaaaaatgtt
     4621 atttctaagg cttgggacaa ccgcttcggt gtccttatgg tgacggaatt gctagaaagc
     4681 ctatccggtc aagcattgcc aaatcagttg attgctgggg ccaatgtgca agaagaggtt
     4741 ggtcttcgtg gtgctcatgc ctctacaacc aagttcaatc cagacatttt cctcgctgtt
     4801 gattgctcgc ccgcaggtga tatttatggc gaccaaggaa aaatcgggga tggcacccta
     4861 cttcgtttct atgatccagg tcatatcatg ttaaaaaaca tgaaagactt cctcctcaca
     4921 actgccgaag aagcaggtat caaattccaa tactactgtg gtaaaggtgg aacagatgcc
     4981 ggtgcagccc acttgaaaaa tcatggtgtt ccatcaacaa ctatcggtgt ctgcgctcgt
     5041 tacatccact cccatcaaac tctctacagc atggatgact tcttagaagc tcaagccttc
     5101 ttgcaggcta tcgttaaaaa actagaccgc tcaacggttg atttgattaa aaattattaa
     5161 aacaaaagac tttgctgggt tgaatgcccg gcaaagcctt ttttctatac aagttcttct
     5221 aaaatgtact tcctcacata ggtaatgaaa tatagcgagc ctgtaatcag gtagagtttt
     5281 tggggattgt ccaagtccgc ctgctccaac cactcctgat aggtctgaac tcgttcataa
     5341 cctgacagat aatcttctaa ctgtaccgct ctgaaatcgt caaaggttgt cacgctaaca
     5401 ggcccaaatt ggctaagctg ggacaacatc tggtccactg gcttggtatt gatggccgca
     5461 aagaggattt caatatccct gtcagcatac ttttcttcca agagttgtgt caggacggcg
     5521 atgctttcat tattgtgggc accgtcaatc atgagattag gcctaatcaa ctctaagcgg
     5581 cccggccaga tggcttggga caagccctgg ctgatggttt cattggtaat ctttggaaaa
     5641 tcagggctga gaagctgagc tgttgtcact gccaaggctg cattgacctt ctggtgacga
     5701 ccctgcatct gtagtgttaa ctcttccaca cggccgagag gacttgaaac tgcaaagcct
     5761 gctctgctat tttccaaaag aatctcccgc cccaccgcat aggtcggact ctgaagctga
     5821 ctggcgtgat cctcaaacac tgccaccact tctggctggt cggtcgcata gaggagggga
     5881 acccgctcac gcaagacggc gaccttgtga cgggatatgg cagcgtgggt ctctcccaaa
     5941 aatgcctgat gatccaagcc gatagaggga caaaccactg ccaagggagc aaggacattg
     6001 gtcgcatcct gcaaaccacc catgcccgcc tccaccaaga gaatgtcggg acgctggtag
     6061 tgggcaaagt agacaaacat agccactact acaatctcaa actccgagat ggcatccagt
     6121 ccagccgtct ggtccaagtc ctcaatcaag ggttgcaagt ctgtcacaat cctcgcaaaa
     6181 tcctcctccg aaatcatctc ttgctcaaag acaatctgct ctcgaaaatc aatgatagac
     6241 ggtgaagtaa agcggccgac ggtgtaatcc gaagactgca agatagcctg cagggcattg
     6301 agggtcgaac ctttaccgtt tgtgcccaca aagtgtacgg tcggaatttg aagctgggga
     6361 ttgtccaagc gccccaagag ccagctgaca cgtgcaacgc cgttttctaa atctgatgca
     6421 ggacgactag atagccaccg gcgagtttct tgataattca tgattccctc tctacaaaag
     6481 cagcaacagg gggatgacct gttgctcaat actgttttat ttaatgccca ttaacttagc
     6541 caattcaggt attttttgta aacttggcaa gacaagcatg gtcacgacaa tccgtaatgg
     6601 aatttcaaaa atagctttta tgaaacgact gctatacaga acaatccaag gtgttccaaa
     6661 atggaaatgg agggcaatcg gtgtcatgat aaaggaaatc acaacctgaa tcaagacaac
     6721 tacaccagcc acatagagcc aatcagcctt gttcttggtg tctagcggtt ttcgatagaa
     6781 gaaccagccg tagataaaag ccgatactgc ctcaatcaaa atccaagtga agaggacagt
     6841 ttgcccacta aacaagacaa atattgggtc tgaaatagcc gcaaagacag ctgcccaaac
     6901 tggacccgca atagctccca aaatagtatt gggaatgaag gtaaactgaa cctgtaaagt
     6961 atcagaaatc cgaatagaga aatagttctc cacaatcata accaaggcaa gggtcacagc
     7021 aatagcagcc aacaactgca ccgttagttt tggaatcttc ttttccataa aaaatgctcc
     7081 tttttcaaaa tggagctgtc gtgtgtattc gacagcggat gcaatggttt accgcgctga
     7141 cgcttcgtta tgtggcaaca tcccatccac atacacttga cgcaaaccat ctactctgtg
     7201 caaatttctt tgctagtcta ttgtatcaca cactatatat tttgaccact tgctaaaaac
     7261 tatacctttc taaaggtata aactataaga gaaactggca gtctccgact accagttcgt
     7321 ttttcttatt tcaaacgttc aacttcacgc gcaataacca attcttcatc cgttggaata
     7381 accaagacac gaacttttga ttctggcgtt gaaatgtcac cattcgcacc acgaacattc
     7441 ttagctgggt ctatttcgac accgaaccaa gacaaacctt ctactacgtc attgcgcata
     7501 agcggtgcat tttcacccat acctgccgtg aagacaatag catccgcacc attcagaacc
     7561 gcaaagtatt gaccaatgaa tttcttgata cggtcgataa aaatgttata agccaaaaca
     7621 gcatctgggt tcttagcttc caaacctgat tcaatgtcac gcatatcact tgaataacct
     7681 gatacaccaa gcaaacctga ttgtttattc agcatgttaa caacatccgc agcgtccttc
     7741 aactcatcaa catttgcaat caagtaagga ataatcgctg gatcaatatc tcccgaacga
     7801 gttcccatca ttggaccagc taaaggagtg aagcccatag aagtgtcaac tgattgaccg
     7861 tggtagttgg cagtaataga tacaccattt ccaatgtgag ccgtaatcaa ttttaattcc
     7921 tcaatcggac gtcccaatac ttttgctgcc tcatgcgcta cataatagtg actagttccg
     7981 tgagctccat acttacgaac cttgtggtcg gtatagtact tttgtggaat cggataaaga
     8041 taggcatgct ttggcatcgt agtgtgaaag gctgtatcaa aaacagctac attcaaaact
     8101 tctggtagta cttcctcaaa tgcacgcatt gctgctacgt gagcagggtt atgaagcggt
     8161 gccaaagcac ttagttcttc aatttgctca acctcttttg gtccaataac agctgattct
     8221 ttgaaaatct ctccacctgc aacaacacgg tgtccgatac cagtaatttc ctcgtaagca
     8281 gcaatgatgt tgtgtttaag caagtcttct aggagaatct taaccgcaac cgtatgatta
     8341 ggaatatcta aaacttcact ttctttcttc ccatcatact taactgttga gatggaatcg
     8401 ttcaaaccga tgcgctcaac aatccctgcc gctaatactg tttcttctgg catttgataa
     8461 agttgccatt ttagacttga actacctgca ttaattgcaa ttgtttttga catatcttac
     8521 ctcttttaaa gcgttttcct aactagtata acagattttc acttaaattg cattctcttg
     8581 cttccaattt ttgaaattga gcatgaactt ctgaatagct tctggttctt gaagactttg
     8641 taagggataa acaaacggcg tcaacgacct tgcagctttc ttttgcaaga caaaaataga
     8701 cttggccata gcagccttcc caaagagatt tggtggcagg gcaatcatgg caacaatatt
     8761 ggcttgctcc tgtaaccaac ctttcagcaa atcgctttgc ggactagtca ataaatcatt
     8821 tggagccaac aaaatcgcaa agccatcttt ttccagatat ttgagggatt gttccataag
     8881 taaatgatgg gcgtaggtat gttcctttgg actggcgacc tgatagcggc tagcaatctg
     8941 gtcatctgga tagtagccaa taggcaaatc tcccaaaatt acttgacttt ccttcaaaat
     9001 ctgcggacgt accgcatctc cctgagcaaa agaaatatct gcctgcatga catcagcaat
     9061 acttgccgac aaatcaatca agaggtcgtc cacttcgatc cctaagtaat ccaattcttt
     9121 ctggctggcg ttgagaatag tctgcgctag attgcctgtc cccgaaccaa tttccagaac
     9181 cgtcaccttt tgagtcggca ccaattggtc tactagaaaa gataggataa atccgataga
     9241 gtctggtgtg aactggtgat tgtactgcat gggttcagtc tgattggcct tgatgagcag
     9301 gaattggtag gcacgacgcc attcttcctt ggttaaatct agttgtttca aggtcttgtt
     9361 attattgata ataaggtccg tctcatgctg accagctacg taagcagcat tttgctcaat
     9421 catggcatca tagatattgg tacctagctg gttttggata gtctgtacgt tttctaatag
     9481 caggtcgtaa gcctgttcga tcttttcaaa attcatactc ctatcttatc aaaatttcac
     9541 agactttgca ccaaaaagga gagcgagtca actcaccctc cttctgatga tagccccaaa
     9601 ggaaattgat aggtatacag accatcactt gttaactcaa ctgtaaccaa tagttggtct
     9661 cctttaagtt gataacgagc ctgtccctct tgaaaggaga cccttcctct attctccttc
     9721 tgcttagaac ctgtggttaa atttgcttcc ttttcattca ctaccgctcc cgtaactatt
     9781 ttttctactt gcaggtcctg ctcgaccttg tccaagacca tctgagccat gatataagca
     9841 gtcgtttctt gccttgccac ctgtaccaag cgactctcag cctcttggcg gtggagataa
     9901 aactgaagca agagactaaa aacagccagc atcaaaaggg catagagcag gatgcccgct
     9961 ttaacttttt tctttaaaag catagataaa agttcgctcc tctccgtttt taaagctaaa
    10021 gtcgatgcgc actagctggt tttcttggga aatggcagcg ctatccacct gatagagcat
    10081 gggctggtaa ccctgtcccc tgtcatttgt tttccgaaaa tcatccgacc gtgactttcc
    10141 aaaggccaaa gcctgttcgc ctttgttgac atagaccttg ccattttcaa ccttgaccaa
    10201 gtccgactgg tcccactccg accgcaattg actagagaag accaaccatt ccttttgaac
    10261 ggtctgacct tggtaatgcg cttcttggac cagcagtttt gacaagcctt caaagaccag
    10321 aagacttcct gataggatga ttaaagctac caagcattcc aagagagtaa aagcaggaat
    10381 tttacttttt aacaaccgat aaaacctcct tcccctcatg gaaaaccgca accctgtccg
    10441 ccgttcgttt cacctgaact gtaacaccgt ttaaggctag gttatcttgc ccggtctgaa
    10501 cagccatctg agctagattg agaacctcct gttgttccaa ttcccaagcc tgtcgcctgc
    10561 gaccagcatc cacagctgat aaaatcaagc tgcaaatggt cactagagtc gcaagggcaa
    10621 ccagactttc tagcaaaata taagccttat tcttctgttt tcttatagcg accactccct
    10681 atatataatt gatacgtgac tattttttga ctaagccgaa aacgaatctt ggtcagagaa
    10741 gaatttccac catcttcttc aaatgtgatg gtcttccctt ctaatacttc tacatttctg
    10801 ggtacctcta cagcctgata accatttgta acttcctgtc caccgatagc aaggttcact
    10861 ttttggtggg aactggctgc caatttctga ctgtctttat agatggcctc aaattcccag
    10921 agaaaaattt cttcctgaac agaccgaaag accgtttgta ctgttcctga tagggaaaca
    10981 gctaaaaaac tgacaacaaa caaggtcagc aggctttcca aaagcgtgaa agccttattt
    11041 tttcgcctta gcatactctg ccgcttgttt ttcagtaata tagcctttcg cctgcaaatc
    11101 tgccaccgtt gcttcctcgt catgttccaa ttcatagagc tccatctggc tctccactac
    11161 tttgacaaca gccgcatccc ccttcttctg aatagcatcc ttctgctggc tcaaatttgg
    11221 cacaaagagg agcaagagca gactaataat gcccaaaacg actaacattt ccaccagagt
    11281 gaaccctttt accttcattt caactaattt tttcatttta caactccata ttttgataaa
    11341 tcggcagcaa catggctgcg tagatgagaa cgaccattaa ggccacaaat agaaagacca
    11401 gcggttgaat cagctgcatg gctctattga cccgagagaa aaaatcctcc caacactcgg
    11461 ctgcatagac tgtcaactcg ctccctaatt tggacttgac ctgaccgtac tcgacaatca
    11521 aactcagctc ccgcttaaaa aaggcgtagg tcttgatgtg ttcgtgaaaa ctctgaccat
    11581 tggaaagcga ctgctccagg tcctggccaa tctcccgaaa aagctgcgac tgctgctctt
    11641 gcatcaagcc cacaatctgc ggcaggtcca agccttgccc aatcaaactc ccccactccc
    11701 tggcgtaata ggccgtcagg taggtttgga tgagttttcc gaaaaatggc agagctgcca
    11761 agcaggaaaa tgccttgatt ttgctagttt tgcgaaacca aaccatacca gccaagacag
    11821 ctaccaaact aagtccactt agagataaaa agatggtcgg tagatgattg atcagcacgg
    11881 tcgctgcatt gccttcctcc aactggggca gaagatagtt tttcaagccc agcataatca
    11941 agagtaaaaa accaagcaat ataatcggat aggtcgccac ctcaatcagc tttttacgaa
    12001 ccttgctgac attttccaga taggactgga tatggctcaa actcagacta gtattgccat
    12061 gaacctctgc cagagctacc tgtgtgacca ccgcatctga aaaacgcaaa tccgccagca
    12121 aacttgaaaa gggtttgcct gctaacagcc cgtctgacaa gacctgggta tagggatctg
    12181 ccagaagctg actgcgtttg aggaaatcaa caatctcccc cagatgaaaa ccactggcaa
    12241 aaagattatt gaaaagctca atgaccttac gctggcgagc caagggtaat tttttctgtt
    12301 tctgcctgcc gaagactgat atgtcctgct gcaaaaaggc gatcaatttg cacattccac
    12361 tggtctgcgg aatggttttg gtaatttcct tttgcaaaat ccactacacc tcctcccccg
    12421 attaaacgtt gataggcaat accttgaagg gcattattta gctcttcagg actgaccccc
    12481 agttccaaca tacgggcata gacacctgaa atagaccttg catgaactgt tgagaaaacg
    12541 gtagctcccg tcagactggc tcgaatgact gctcgagcgg tttccgcatc ccgaatttca
    12601 ccgataatga gcaagtctgg tcgatgacgg agggacagtt tgatcagatt atcgtaggtg
    12661 gctccgatgg cttcattgag ctggagctgc aacatcccgt cctgcttgat ttctacagga
    12721 tcttcaatgg tcaaaatttg cttgtctgga aacttcagcc tggcaagatg atacatgagc
    12781 gtggtcttac cagagccgac tggacccgaa aaaaggtaga gccctcgtcc cttgatttct
    12841 tctgcaagcc gctcggccgc ctcaaaccag aacttgagtt ccttgtcatt gtcataaagc
    12901 aggcggataa ccaaactttc cttgccacga taatcaccga cagttgataa gcgaagtgaa
    12961 atctctccgc tcccataatc atagtcacag gaaccctgct ggctacggcg tttttcacca
    13021 acatttaaac ctgctaaaaa cttgaaatgg ctgatgatgg ctgttacttc ctcctcagcc
    13081 aagtcttgca caaattcccg ctcgtccatg atacgatgat agacttggta acactcacct
    13141 cgaggaacta gatagatgtc actgacccta tctgccaccg cctcttcaat catctttctt
    13201 gctttttctt gaatcataca acctcctcac cctatcaatt cgtaaggaga cttgattttc
    13261 ctttcttttc tgataaaata ataaaaaagc ttggaggttc ctatgaaaaa attaaaaaaa
    13321 ggcgaccata ttcgcgtagt cagcccgtca tcttccatcg aaagaattgg tggcttcgag
    13381 gccaatctag ctgccaagga aagactagag gaacttggct tcaaactctc cttttcagaa
    13441 cattattttg aaaacgatat gttcaattcg gctccgattg ccagtcgtgt tgcggacttg
    13501 gaagcagcct ttgcggatga gtcggtcgat gccattctga caaccatcgg tggtttcaac
    13561 tgcaatgaac tcttgcccta tctgaatttt gatttgattg cacaaaatcc gaaaattttc
    13621 tgtggctact cagatacgac tgccctgctc aatgccatct atgccaagac gggcatgcca
    13681 acctatatgg ggccagccta ttcaagcttc aaaatggtgc aagcccaaga gtatcaaaca
    13741 gaagcctggc tcaaggctgt gacacaagac tcctttgact tgatcccgag tccagaatgg
    13801 tctagcgacg cttggtacct accagacgcc cctcgcacct tttacccaac agaatggaaa
    13861 gtctataatc caggccaggc ctctggtatt gccattggcg gaaacatctc aaccctcaac
    13921 ctgctgactg gaacagagtt tgctcccaga ccagacgaat atattctatt tttagaggag
    13981 gcggaagacg acgattatct cattatcgct cgtcacttga ctgcactttt acaagcctat
    14041 ccaaatccac aggctcttgt cttcggtcgt tttcctaaag agaccaagat gacggaggag
    14101 attttgctgg cgattttgga caagcaccct attctcaaaa ccatcccagt tctctacgat
    14161 ttggactttg cccataccca gcctcttttc accattcgga ttggcgggca tgttgagctt
    14221 gatacggaag cattttctat cacattcagc taaaaaggat tgacccgcaa aggtcaatcc
    14281 ttttttatta ttcatttacg caattatttt gttttaattt gcaggggcgt acacgaggtt
    14341 gtgtaggttg cttaataaaa ccagccggta aattttctct cgcttctacc aacatcagcg
    14401 aatgataccg ctgcaaatat tcatcgcatt cctcgcacca atgctggtct gattcatccc
    14461 aaaaagccac catcgttcca ttcttacttt tcttcattgg aaaatcctct gatagccgta
    14521 cccactcttt ttgaaaggca ttcagtgcat cctcatagcg atcaaaagca gccctactgg
    14581 taacatcctc ttcccaacca tctaagaacc accagggttc aaaatctcca tacattttaa
    14641 taacttgata cataatatta cttccttttt cgtacacatt atatcgaaat tgtatgattt
    14701 aagaaaacat tctgcttgtt aattccttat caagtcatat atatggtttc tttccgaata
    14761 tcaaaaagca catccctcaa agagagagat gtgccatctt aatttattca gttacagctt
    14821 caagctctgc ttctgcagca agctcttctg ctactgtgtc ttcaatgatt tcaacttcat
    14881 tgatggcttg tggttcaaga ttacggtagc gggccatacc tgtacctgct gggataatct
    14941 taccgatgat aacgttctct ttaagaccga gaaggttgtc acgtttacca cgaatagctg
    15001 catctgtaag aacgcgagtt gtttcttgga aggatgcggc agacaagaat gagttggttt
    15061 caagggaagc cttcgtgata cccataagaa ctggacgagc tgttgccgga ataccacctg
    15121 caataaccac ttccgcattg gcatctgtaa agtcggtaat atccatgagg gtacccatga
    15181 gaagatctgt gtcacctgga tccatgacac gaactttacg aagcatttga cgaaccatta
    15241 cctcgatgtg cttgtcgccg atttctacac cctggctacg gtaaactttt tgaacttcag
    15301 aaagaaggta agtttcaacc gccaagacat cacggacttc aagcaagcgt tttggttgga
    15361 tagaaccttc ggtaagggca gctccacgcg cgacttggtc accaacttca accttcatac
    15421 gggctgtaaa tggaaccaca tattcgcctt cgccagtttt acctttaaca aagactttct
    15481 tggtacgagt agaagcatct tcttcaatag cgataacttc acctttaacc tcagtgataa
    15541 ccgcttcccc tttcggatta cgggcttcaa agatctcttg gacacgagga agaccctgcg
    15601 taatatcgct gtttgaggct acaccacccg tgtggaaggt acgcattgta agctgtgtac
    15661 caggctcacc gatcgattgg gcagcaatcg taccaactgc ttcacccact tcaaccgcat
    15721 cacctgtcgc caagttgata ccgtaacaat gacggcagac accgtgacga gtattacatg
    15781 taaatacgct acggatggtt acttgttcaa cacctgcatt gacaatttca cgggcaatat
    15841 cttcagtaat caattggttt ggaccaatga taacggcacc cgtttcagga tgtttaacag
    15901 ttttcttagt gtaacgacct tgcaaacgct cttcaagtgg ctcgatcatt tccttgccat
    15961 ctgtgattga acggatgtca agaccacggt ctgttccaca gtcatcttca cggataataa
    16021 cgtcttgggc aacgtcaacc aaacgacgag tcaagtaacc tgagtcggct gtcttcaagg
    16081 ccgtatccgt cataccctta cgggcaccgt gagttgagaa gaacatttcc aataccgaaa
    16141 gaccttcacg gaagttagac aagataggca attccatgat acgtccgttc ggagctgaca
    16201 tcaaaccacg cataccggcc aactgggaga agttggagat gttaccacgg gcaccagagt
    16261 ccatcatcat aacgattggg ttcttaggat cttgtttttc aaccaggcgt ttttccaatt
    16321 tttccttagc tgaacgccat tcatctgtaa cagctgcata gcgctcatcg tcagtaatca
    16381 taccacgacg gaattgtttc ttgatttgtt ctacacgttc gtgagattct tcaatgattt
    16441 cagccttgtt gtcgataact gggatatcgg caatacccac tgtcaaacca gcgagtgttg
    16501 agtgataata acccaagtct ttcaaacggt caagaagggc tgatgtttca gttgtacgga
    16561 aacgcttgaa gatttcagcg atgatgttac cgagattttt cttcttgaat ggtgggttga
    16621 ttggtaattc tgcaatggca gccttgatat ctgaacctgg ttgcaagaag tatttatcag
    16681 gagttccttc tgtcaagtta gcattgtttg gctcttgcaa gtatggaaga ccttctggca
    16741 taattgcgtt gaacaagatt tttccgacag ttgtcatcat gaccttgtgt ttttggttgt
    16801 ctttccaagg tttatcgagg ctatctgttg cgatacctac acgggtatgc aagtgaacat
    16861 agccattgcg gtaagccata acagcctcat ccgcatcctt gaagaccata ccttcacctt
    16921 cacgaccagc atcttccatg gtcaagtagt agttacccaa aaccatatcc tgagatggtg
    16981 ttacgactgg tttaccatct ttagggttaa ggatgtgttc tgccgcgagc ataaggatac
    17041 gtgcttctgc ttgtgcttct tctgacaatg gaacgtgaat cgccatctgg tcaccgtcga
    17101 agtcggcgtt gtaagcttca cagacaagcg ggtgcaaacg aagggcttta ccgtcgatca
    17161 gaactggctc aaaagcctgg atacccaaac ggtgaagggt aggtgcgcgg ttcaaaagaa
    17221 ctgggtgttc tttgatcact tcttccaaga tatcccaaat acgatcatcc ccacgttcaa
    17281 tcaaacgttt tgcagctttt acgtttccag caatatcacg ggcaacgatt tcgcgcatga
    17341 caaacggttt gaagagctcg atagccattt cacgtggtac accacattgg tacattttaa
    17401 gcgttggacc aacggcgata acggaacgtc ctgagaagtc aacacgctta ccaagcaagt
    17461 tttgacggaa acgtccttgc ttacctttaa gcatatggct gagtgatttg agcggacggc
    17521 tgcctggtcc tgtaattgga cgaccacggc gaccgttgtc aatcaaggca tccacagctt
    17581 cttgaagcat ccgtttttcg ttttgtacga taatgcctgg agcgtttagt tccaagagac
    17641 gtgccaaacg attgttacgg ttgataacac ggcggtagag ttcgttcaag tcagatgcag
    17701 caaagcgacc accatccaac tgaaccattg gacgcaaatc tggtggaata actggaagga
    17761 tattgagaat catccactca ggcttgttac cagatttata gaaagcatcc aatacatcca
    17821 agcggcgaac tgctttaatg cgtttttgac cagaagctgt tttcaattct tctttcaagg
    17881 ctgcaatttc ttttggaaga tcaacctgtt tcaagaggtc ttggatggcc tcagcaccca
    17941 ttttggcaac gaaggaacca tgaccgtatt cacgcaaacg ctcacggtat tcgcgctctg
    18001 tcatgatcga cttgtgctca agcggtgtat ctttcggatc aatcaccacg taagctgcga
    18061 agtagataac ttcctcaagc gcacgtggac tcatatccaa ggtcaagccc atacgacttg
    18121 gaataccttt gaaataccaa atgtgtgaaa ttggtgcttt caactcaatg tgtcccatac
    18181 gttcacgacg tacttttgca cgagtcactt caacaccaca gcggtcacaa gtaatccctt
    18241 tataacggat acgcttgtat ttaccacatg aacactccca gtcttttgtt ggaccaaaga
    18301 tgacttcgtc aaagagtcca tcacgttctg gtttaagtgt acgatagttg attgtttcag
    18361 gttttttaac ctcaccgtaa gaccatgaac gaaccttact tggtgaagct aacgtgattt
    18421 gcatactttt aaatcgattt acgtcaacca ctaataatcc ctttcttttc ttgtgagagg
    18481 ttggttttcc agacctcaaa ttcttgaaca ataatcagca gaatggatag cttgtaagct
    18541 atttttctat aaatcagacg gtggaagacc gttggccctt atctctttca gttctgaggt
    18601 ttggaccaac ttgttccatc cattctaatt attctttgcc ttctgcttct tctgctgcaa
    18661 aggctgcggc tgcgtcagct gcggcttttg cacgtgcttt ttcaagatca tctacgtgga
    18721 tgatgtcatc atcttcacct tcatcaaggt cacgcaattc tacttcattg ttgtcttcat
    18781 caaggacacg catatccaaa ccaagtgatt gcaattcttt gacaagaacg cggaatgatt
    18841 ctggaacacc tggttttgga attggtttac ctttggtgat ggcttcatag gctttcagac
    18901 ggcctgtcac atcatctgac ttgtaagtca agatttcttg aaggacatta gaagcaccgt
    18961 aggcttcaag ggcccaaacc tccatctcac cgaaacgctg accaccaaac tgagccttac
    19021 ctccgagtgg ctgttgagta acgagtgagt atggtccgac tgagcgggcg tggagtttat
    19081 catcaaccat gtggtgaagc ttgatcatgt acatgacacc gacagataca cggttgtcaa
    19141 atggctcacc tgtacgtcca tcgtaaagaa tggttttggc atctgagtcc atacctgctt
    19201 ctttaacagt tgaccagagg tcttctgaac ttgcaccatc gaaaactggt gttgcgatat
    19261 ggatgcccaa gttgcgagcc gccataccca agtgaagttc cataacctga ccgatgttca
    19321 tacgtgatgg caccccgagt gggttcaaca tgatgtcaac tggtgttccg tctggaagat
    19381 atggcatatc ctcaacaggt acaatacgtg aaacgacacc cttgttcccg tgacgaccgg
    19441 ccatcttatc tccgaccttg atcttacgtt tttgagcgat gtagacacga accaacatgt
    19501 taacacctga ttgcaattca tcaccgttgg cacgagtaaa gattttcaca tcacgaacga
    19561 caccatcggc accgtgaggt acacgaagag aggtatcacg tacttcacgt gacttgtcac
    19621 cgaagattgc atgcaagagg cgctcttcag cagaaagatc tttttcacct tttggtgtga
    19681 ctttaccaac aagaatgtcg ccctctttaa cttcggcacc aatacggata atccccattt
    19741 cgtccaagtt gcgaagagca tcttcaccaa cgtttggaat ttcgcgtgtg atttcttcag
    19801 ggcctaactt agtatcacgt gtttctgatt cgtattcttc caagtgaaca gatgtataca
    19861 catcgtcttt cacaaggcgt tcagacatga taaccgcatc ctcgaagttg taaccttccc
    19921 aagtcatgta ggcaacgata gggttttgac caagagccat ttccccgttt tccatagaag
    19981 gtccatctgc gatgaagtcg cctttttcta caacgtcgcc caattttaca agggtacgtt
    20041 ggttgtaggc agtaccagag tttgaacgac ggaatttaga aatgtggtag acatcaagcg
    20101 atccatcttc acgacgcact tctaccttat ccgcatctgc gtaaacaacc ttaccatcgt
    20161 gttgagcgat aattgccgca cctgagtcgt gggcagcctg gtattccata ccagtaccaa
    20221 cgtaaggtgc ttttggatca atcaatggga cagcctgacg ttgcatgttg gcacccatga
    20281 gggcacggtt ggagtcatcg ttttccaaga aaggaataca tgctgtcgca acggcaacta
    20341 cctgtttagg agaaacgtcc atgaagtctg ctgaatctgc tgggaactct tggttgttac
    20401 cttggtgacg tcccataaca atcttatcaa cgaaacggtt gttttcatca agtggcgatg
    20461 ttgattgggc tacgatgtag gcatcttctt catcggctgt caaccaaaca atctcatttg
    20521 taactgtacc agttgcacgg tcgatcttgc ggtatggtgt ttggatgaag ccatacttgt
    20581 tgagatgccc ataagatgac aagttgttga tcaaaccgat gtttggtccc tcaggcgttt
    20641 caatcggaca catacgacca tagtgagtgt agtgaacgtc tcgaacctca taaccagcac
    20701 ggtcacgagt caaaccacca ggtcccaagg ctgacaaacg gcgtttgtga gacaactcag
    20761 aaagtgggtt gtgttggtcc atgaactgtg acaactgaga tgaaccaaag aattctttga
    20821 ttgcggctgt aacaggacgg atattgatga tttgttgtgg cgtcaatact tcattgtctt
    20881 gaaccgacat acgctcacgc aagttacgtt ccatacgagt caaaccgata cgtacttggt
    20941 tagcaagtaa ttcaccaacg gcacgaatac gacggttacc caagtggtca atatcatcta
    21001 cgcgaccaag tccttcagcc aagttgagga agtagctcat ttcagccaag atgtccgcag
    21061 gtgttactgt acgtacgttt tctgctggat tagcattacc aatcaccgtc acaacacgtt
    21121 ctggatcctt aggagctaca atcttgaatt tctgcaaaag aactggctca agaagaacag
    21181 cgttgtcatt tggaatatat tctaccaagt tgagctcatc gaattgtgct tctacttttt
    21241 caagcacatc acgactcaat accgtaccag cttccaagac gatttcgcct gtctcaccgt
    21301 taatcacatg ctcagcaagt gtttggttga gcaaacgagt acggaggttg agttttttat
    21361 taatcttgta acgaccaaca ggtgccaaat cgtaacgacg tgggtcaaag aaacgagctg
    21421 tcaaaaggct acgagagctt tcagctgtct ttggttcacc tggacgaagg cgctcataga
    21481 tttccttaag cgcttcatcc gtacgagaat ctgctgggtt tttatgaata tctttttcaa
    21541 tggtattgcg aaccaattcg ctatcaccga agatgtcaaa gatttcatca tcgcctgaga
    21601 aaccaagcgc acgaacaagc gttgtgaacg gaatcttacg cgtacggtca atacgagtgt
    21661 aggcaatgtc ttttgaatct gtttccaatt ccaaccaagc tccacggtta gggataaccg
    21721 ttgaaccata acctacttta ccgttcttat ctactttatc attgaagtag acacctggtg
    21781 aacgaactaa ctgagaaacg atgatacgct ctgcaccgtt gatgatgaag gtacccattt
    21841 cagtcatgat tggaaactca ccgaagaaga cttcttgtgt cttgatctcg ccagtttctt
    21901 tattcaccag acggaaagtt acataaattg gagctgagta gttcgcatca tgcgcacgcg
    21961 cctcttccaa tgtgtattta gggtctttca attcataacc aacgaattcc aattccatgg
    22021 tatccgtaaa gtttgaaact ggaagtacat cttcaaagac ttctttcaaa ccataatcta
    22081 aaaagtcttg gaaagagtcc gtttggattt caatcaaatt tggtaaatca agaacttcct
    22141 tgattcttga aaaactacga cgggtacggt gcttaccgta ctgaacttca tgtcctgcca
    22201 aaagttttct cctttgtaat aagatacgag accgtaaaaa ccaaagtgaa aataggagag
    22261 tgacgttgtg ccattagaca caaggagctc tatctttttc acacaggttt taggtcgagt
    22321 tcaattaaag atacgaggac gtaaaattcg agagaaaaat aggaaatcga cgaagtgtca
    22381 tcagacacca ggagatttat cttttttccg acgaatttag tccgagttca attatataca
    22441 gccatgtgat gaccaacatt catccttttt ctgaattttt agaatcttta agaatgggta
    22501 acaattctca aaaaaattcc tcatagacac aaaaagagca gctaaatctt cctttgaaaa
    22561 agtttgattt aactgctgca agccttgttt ggacaatatt tcaaacaaga cacacgacaa
    22621 ataatttata ctattatagc acaagtacta ggaaaaatca aggtgaatca ttattcgctt
    22681 gctcactagt tgctgtttgc gtttctgatg actggttcgt gttattagct gaagaacccg
    22741 tgctactccg agtcgaactg cttcgttggg ttgagctact tgatgttggc gtttgggagc
    22801 cgataattgt attccaagcc tgtactcggt cactatctgt ccccccaacc atgaagttat
    22861 agctcgttac tggtgcacca tttttagccc aataactagt tgtcatcgca cctccaactg
    22921 ttacttggcg cccatttacc tgtgtcgtcc ctgcacgttg acctgtagaa gcaacaacgc
    22981 tagaagcaat aacactactg tctaattcaa attttcctgc gaacatatcc gcattaacat
    23041 tgtaaagcgc atcaaccata tgggccacat attgtgaatt attgtggtag cctgtccaga
    23101 catacatttc tgagttatca tcattcccag cccaggtacc taaagttact ctaggggttg
    23161 atagcatgag ccacacgtca ttgacttcat tacttgttcc cgtcttaccg acgaaatcag
    23221 atgatgctgc ctgtgggttt aaaccactca atcgactctt gaacgtcgta gtataaccag
    23281 agttgacaac ctgtctcaaa agctggttca taatacttgc agttgcttta gaatagacct
    23341 gaaccggagc cgcttcatgc tgatacacta ctgttccatc agaagcagta atgctttcaa
    23401 caatgtaatg tttgttataa acgccaccat ttgccaaagt ttgataggca ttggtatttg
    23461 tcaatactga aatttcaaca ccaccgccca acggtacact ttcaatatcg tacataggaa
    23521 tatgataatt cattttatcc atgtacgctt tggcatctac acctgcattt ctcatcatct
    23581 tataggtcca aaaagcagga atgttaacag aacggtcaat agcagtctgt aagttcatca
    23641 taccagtacc acgtcctgaa ccatacataa tcggttgtcc acttgagaag ttcgttggat
    23701 aatcggaaag gatgctggca gaacctatca aaccttgatc aatcgcaata ccgtaagcta
    23761 acagaggctt gatggttgac gctggcgaac gaagagtatc aaaggcatgg ttattttggt
    23821 tggttgcata atcgcgacca cccacaaatc ctaaaatagc tcctgtggca ttatcaatta
    23881 agacactacc tgtctcgaca tattcgtttc catcatccaa aacagatcca tagtttgcca
    23941 caacagactg catcgccgca tagattcctt gatcaacggt actcttgatc gtatagccac
    24001 cttgactcaa ttcttgctta gccaattctt cataggaagc cttagtttca tcgtttttca
    24061 agtcattttc agaaacctta tcgcgtttta ccagataatc aaacataacc tcttgcgctt
    24121 cttccatgac ctcgtagtag agataatctt tcgtatccgc cattacagga gctggagcaa
    24181 taaaatcttg tttaatatcg taagctttgt aggtttcgta ttcttccttg gtcaagaatg
    24241 acgcccgata catattaaag agaacatctt gatagcgttc aataccgtaa accatatctt
    24301 catctgattt acgtgttcca tctgatgcat agggagaata aacaatcgga ctttgaggta
    24361 agcctgcaat aaaagcagcc tgcggaacag tcaagtcttt cgctggttta ccaaaaattc
    24421 cctgagccgc agcttctacc cctgcaatat ttcgtccctg attatttcga ccaaatggag
    24481 aaacatttag gtaaatggtc aaaatctctt ccttggtcat attccgctct aatgccaaag
    24541 ccgaaacaat ctcattagcc ttacgcgtaa aggttggagc atctccgaca agttgctgtt
    24601 ttatcaattg ctgcgtcaag gttgaaccac cgctagatga acctagacca actgatccca
    24661 gtgccgcacg caaaacagcc ttaggcacaa ccccattgtg ggtttcaaat gtttcatcct
    24721 ctgtcgcaat tacagcctgt tttagataat tcgagacctc ttccgaagta ataggtacac
    24781 gaagcagatc tgaattcact tccgacacca agctaccatc cgaataggta acggtggaaa
    24841 tccgactaac ttccgaaacc ttcgctacca gttcctctgt tttgggaatc ttaacgtcat
    24901 caaaaagact aaccacgaaa ccaattccta tacccgcacc aaaaagaccg aataggaaca
    24961 ccaagacagc tactgaattg aataataatt tcagcgtccg aaggaaaact cctactgcat
    25021 cccctaagcc tagggcactg attttctttt taaaatcttg cttatctgat ttagtcgcca
    25081 tattaactcc ttatcgttcc attataccaa attttgttta ttttccgcaa tttcgtggta
    25141 taatagggag gaatttttta aaatgaagtt cggtccaaaa atcatataaa atggtttatg
    25201 gtcctgtata ttaaacctaa aggagacagc ccacatgaac atttttgaag aactaaaagc
    25261 tcgtggcttg gtctttcaaa cgacagacga agaagccttg gtaaaagcat tgacagaagg
    25321 acaggtttct tattacacag gatacgatcc aacagcagat agtttacact tgggacactt
    25381 ggttgctatc ttaactagcc gtcgcttgca gttggctggc cacaagcctt acgccctagt
    25441 tggcggtgca actggtctga ttggcgaccc ttccttcaag gatgcggagc gtagcttgca
    25501 aaccaaagac accgtggacg gttgggtaac aaaaatccaa ggtcagctct ctcgcttctt
    25561 ggattttgaa aatggtgaca acaaggccga aatggtcaac aactacgact ggttctcaga
    25621 catcagtttt atcgacttcc ttcgtgatgt tggtaaatac tacacggtca actacatgat
    25681 gagcaaagac tctgtgaaaa aacggattga aacagggatt tcctacaccg agtttgccta
    25741 ccaaatcatg cagggctatg acttctacga gctcaatgac aagcacaatg tgaccctaca
    25801 aatcggtggt tctgaccagt ggggcaatat gactgcaggt accgagttgc ttcgccgcaa
    25861 ggctgacaag tctggtcacg tgatgactgt tcccctcatc actgactcga caggtaagaa
    25921 gtttggtaag tcagaaggca acgctgtttg gttggatgcc gacaagactt ctccgtatga
    25981 aatgtaccaa ttctggctca atgtcatgga tgacgatgcc gttcgtttct tgaaaatctt
    26041 tactttcttg tcattagatg agattgctga aatcgagaaa caatttgacg ctgcccgtca
    26101 tgaacgcttg gctcagaaga ttttggccaa ggaagtcgtg acattggtcc acggtgaaga
    26161 agcctataac caagccctta acatcaccga gcaattgttc gcaggaaata tcaaaaacct
    26221 atccgcaaaa gaactcaaac aaggcctcag caacgtgcca aactacgctg tacaggctga
    26281 agacaacctt aacatcgtgg aacttctagt tacctctggt attgtcaact caaaacgcca
    26341 agctcgtgaa gatgtgcaaa atggtgccat ttatgtcaac ggtgagcgtg tgcaggactt
    26401 ggactatacc ctttctgaca gtgacaagat tgacggcgag ctgaccgtta tccgtcgtgg
    26461 gaagaagaag tattctgttt tgacttatta agatttttca aggaaatcca ccatgatttc
    26521 cttttgttct atcaatagga gaacagctat gacctgtatt ttttgccatc agattgaaga
    26581 aatagatatt ctctaccaga cggaacattt caaggtcgtc tgggacattg accctgtcca
    26641 aactggacat ctactgatta tcagcaagaa acactatgac acacttagcc aaatctctcc
    26701 cattattcgc tatgagctgt cagacttgga agtcttcttg actgataaac tctgtcaagc
    26761 attggcgatt gacggtgtga ccatagcctg caacgatcgc ttgtttgatg ctgacaccca
    26821 tttccaccta cacctcattc cgcggtttca atcagacggc ttctgggacc aaatttcact
    26881 tgcacaagtg caactagacc tgaacgcctt tctcaaagca ttataaaaag cagcccaacg
    26941 gctgcttttt cgcttatata gtcgtttagt ttacttttag tacaaggcaa cgagccgcag
    27001 gcataactca atgctttctt gtttctagga gaccagctga tgtacttcgc ttttttgttt
    27061 tcaggctcag gtacgaatag tccaccggac tattcgtatc ccccagactg tttcaatcag
    27121 gcaaggcgag ttcaaacact ccagtggagt gtttgaagtt ggaaataagg aaacgacgtt
    27181 tcctcgctcg tcgaagtaat aaaagagaaa ctaaatgact atatcaactc ttccacttca
    27241 taaatagtat catccagcac ctcttggtac tgttctaagt cataggctac agaggtttcc
    27301 acctccgcca actgctcttc cagctggatt ttcacctctt ccaccccatc caagtccaag
    27361 aggtgattgg tcacatgctt gacacagttt tggcacgata agtttttcaa tttcaaagtt
    27421 tgcttcatgt tttttctcct tttttatact caatgaaaat cagattcaga ctagcttcaa
    27481 aggttcgggg aacctttgaa ggttggaaat aaagcgaacc tgttcgctac aaaaggttcg
    27541 gggaaccttt gaaggttgga aataaagcga acttgttcgc tacaaaaagg ttcggggaac
    27601 ctttgaaggt cggaaataaa gcgaacttgt tcgctacaaa aaggttcggg gaacctttgg
    27661 aggttggaaa tagagcgaac gtcttcgttt ctccaagagc agatagaacc ctactacttt
    27721 cgcattttca ggtagtaggc tgtaaagctc cacaggagct ttacactcat caagtcaaat
    27781 caacaacatc tgaggttgat tttcgaagag tatgatgatg cccgcaggta cattgcccag
    27841 ccaagcaccg acaagcgatt tgctcgggtg cagtcctttg cagctgcgag attttgctgg
    27901 ccagattctc taggcttttt ttggaaaatg cccctgtgtc tagcagtttt tcaaccagtt
    27961 gcccctgttt tgtggaacat atggtagcta gtaagagctc cacctgcccc tgcaaatgtt
    28021 cctcttcact aatcagcgga taatagtggt acttgctagt ttccttagcc attctcaaat
    28081 agtttttctt ccgcaaccgc cctaaaagtg tcttaatggt cgtcgcctgc caatcaaagc
    28141 cttcctgcaa ggcctgaata atttcctgag aagtcgcacc aggatgggcc cacaggaccc
    28201 gcatgacctg ccactccgca gcagaaattg tctgctccac acattcacct cccaacaata
    28261 attttctaat tttagtttac atttgtagtc aaaaattgtc aagaagaaag actgaacacc
    28321 ttgcccagtc ttctcattat tcttagtgag ccagcatctc ctgaccaatt tccaaaccag
    28381 tcaaaccaac agggtagtat gtcggccagt tttccaactc ttccaagagt ttttcttggc
    28441 tctctccacc aaaatagata tggaagtgac ctgttttaac aggggcgata ttgtgatcgc
    28501 taaattgaac atacttatag ttaccagcat ttgcatccgt tgcttcaaac aagaaacgaa
    28561 caccacgatt tccttttttg taggtcaaaa tcttataacc cacatactta tacgtgaatt
    28621 tttctttctt atctcccact acaaattcca tggtattatc tgtaatgtta atttgatcaa
    28681 catctgtttt gtagccagta tcgtaataag ccttatactc ttcagctgtc ataccacctt
    28741 tgatcttagc cttgtaatcc caaacctgat ctagtgtacc atcaagcaag tatggataaa
    28801 cagattgcca ctcacctgca taatctgaaa gagtacgatc ttttacggca ctatcttcaa
    28861 aataaccgtt ataaacagtt tgcgcagtct cagcaccctc ttctggcaaa atttcagaac
    28921 cttcttggga agttgttttt tcaagggcag tcagattatc ttccataaca gaaatataat
    28981 ccttaccatt tttcatatcc tcatccgtca aactttcaag aggattaaga acgtccaact
    29041 gaaccccagt ctctttggca agtgtttctg caacagattt tgacgcattt tcttcaaaat
    29101 agatatattt aataccatat ttattaatat actctgtcaa ttctgctaga cgtgatggtg
    29161 ttggatcctc atctgcagca acacctgtaa tagaaacttg tttcaaacca tagtccaaag
    29221 ccaaatatgc aaatgcagta tgttgtgtaa caaagtattt ctgtttcgca gcagataatg
    29281 tttcagaata tttagcatcc aaagcatcta atttctcaat ataggctgcc gcatttgttt
    29341 caaaagcatc tttcttttct gggtatttag ctaccaaact atcacgaata ttttctacaa
    29401 gtgtgatggc acgctcagga gacaaccata catgcggatc ataagcatgg ctatgcccct
    29461 ccccactatg gtcgtgacct tcatgttcct cctcaccgcc aggcaaaagc aacatcccct
    29521 ccgtcgcact gataatattt actttttcag tatcaatcga accttctaca tcatggaccc
    29581 atgtttccat attttcattt tcataaacaa aagcatctgc ctcttggata cgagcaatat
    29641 ctttagctga cggctcataa ccatgaacct ctgtcccagc cttaaccaac agatcaacat
    29701 ttgcctcatc acctgccacc tgcttggtaa actcataaac aggataaaag gtcgttacaa
    29761 tattcaactt cccatcttca gaagctgtgc tattgccaca agcccccaaa agcaaagctg
    29821 atgcagataa gaatagtaat ccaatttttt tcatcttaac tccttatttt tttaattttt
    29881 gaacgatatt caccagtatg aaaatactaa tgaaaatcaa ggtaatactt gcactcgctg
    29941 gggtttctgc atagtaagaa gtcagcaacc ccatgaccat tccaaaaaag ccaatgccca
    30001 tcccagtaaa gataacagct ttaaaactct taccaagtcg caatgcaata gaagcaggca
    30061 aaaccataat tgttgaaacc agcaaagcac ctgccgcagg aatcattagg gcaatggcaa
    30121 caccagtcac cacattgaag gcaatggaca tagctcgcac aggcaaccca tctacaaatg
    30181 ccgtatcctc atcaaaagta agaatataca tcggacgtaa aaacagcaat gtcagcacaa
    30241 taacaatcac agcaatcgta aacaaagcaa ttacctgctc ctgactaatc gtcacaatcg
    30301 aaccaaacag atattgttcc aggctaagcc ctgatttccc accagattta ttcatgacaa
    30361 tgagcgaaat agccaaacca gtcgacatga ggatagccgt cccaatttcc ataaaattct
    30421 tgtaaattgt ccgcaaatac tctaaaaata cagctgccac aataacgaca agaacagtcg
    30481 aaagcgttgg tgaaatcccc aataccaaac caaatgcaac tcccgccaag gaaacatgac
    30541 taagagtatc cgacatcaaa ctctgtcgtc tgagtatcaa aaagaccccc aaaataggcg
    30601 agaacagact catcgcaatg attgccagga aagcacgctg cataaagtca taatgaaata
    30661 cagatagatc aaacatcggc aacctcctca tccgcttcat gaacattgaa acaacgccaa
    30721 ggagactgtt gatcacgaac taggtgaata ttacgatcag cgtatttatt caattcatcg
    30781 ggatcatgag ttatcatcag aaccgacttt ccatgcttct tagccgaatg atgcatgagc
    30841 tggtaaaaag catccttggt ccctgcatcc atccctgttg tcggttcatc cagaataaaa
    30901 atatctggat cagaggcaaa catacgcgca atgaccgcac gttgcttctg cccaccactc
    30961 aaagcaccta agcgcttatc ccgatgttcc cacattccaa ctgattccaa actaatccga
    31021 acatgttcct catcatgggc tgtcaaacga cgaaaccaac cttgccgagg ataacgccct
    31081 gattttacaa attcgtaaac cgtgctcgga aaaccagcat taaaacttgc aatttgctga
    31141 ggtaaatagg ccattctcaa cttcttaccc tttatactct tctcagcaat agaaaccttc
    31201 ccttgtttgg gcttcaatat ccccaaagtc gccttaatga gggttgtctt ggctgcgcca
    31261 ttctcaccag tcaaagtcac aaattcccca ctatcaagat aataatgaat atgttctaaa
    31321 accggttctt tgtcgtagta aaacgacaag tcttccacag taatatatct catttatttt
    31381 ctaatcttct ccactaactc acttaagaat cgagcaattg actcctgctc ttcaagacta
    31441 taattttcca aaagctcttc ataagcttcc aaggtatgcg cgtgatgatg agcatgctct
    31501 gcagcaatag gcttagcagc ctcagtcaaa ctaaagcgaa caatacgagc gtccttatca
    31561 tctctaaccg ccaccaataa cccctgagca actaatgact ttgtagcctt cgtgatcgca
    31621 gcctgactaa catttaactc cttagcaatc tcagtattag tatatgcagc cttttcaata
    31681 agcatcaaaa tatgctcctg cgtattcgtc aacttcaccg tgctttgaca agagccaacc
    31741 aaaatctcca attgattctc cgaactcaaa acaatctcgt gcaggtactt ctcaatttct
    31801 aatgcaatac gattcatagg catcccctta accttttaat taacttgtta agtataccac
    31861 atagaaaaca aaaaaacaag gaaaatttac tgaaaaaaag tatatctatc catagcaact
    31921 cgtaagcctt cttaataaaa aagaaacacc aacttctcag tgttccttca tttcaaacta
    31981 ttcttactat ctgttaacaa cagattccgc ctctgttgta acatccctat actcgagatt
    32041 agtcaagctt gcatagacat catcgatact atcacgataa aaatgatccg actgagcaga
    32101 tagcttaacc attttatctt tatctagttc gctcggtgct tctagtgtaa caataccatc
    32161 cttgtcaata atcaatttag agaaattgta aacatagaaa tctgttgaag ttttgacaaa
    32221 agaatcttct tttgcattaa catactcata aacaatagct aaatccccat aataactatt
    32281 cttccaccct ttagtctctt gatagtcatg acgataaaaa atatgatgac gcttcaaact
    32341 atactgactg gtaaggtttt tctctgcaaa atctttttca gcctgctctt gggcaatgac
    32401 aagcaagtca gctagatttt taatttcgct aacagtatca ggaattttat ccaaaccaga
    32461 aacctcaaga ctaatttcct tatcatctgt caatacatag cctgtattca tggctaattc
    32521 tgctttctct accgaaaaag caatcatatc tccattcgaa attggtgtac tattgcttgc
    32581 ggaaggtttc aatatatcat caccattctc cccaatagga tagagaatag tactgtcaat
    32641 actgatttct ggataatctg cctgaccact aatgccagta taagtaactg ccagcttttt
    32701 taccagatcc tgagaactaa tttctgttgt ttctgtaaga cccgatacat cgtaggtata
    32761 ggtttcagat tttatcttac tagccacagc cgattcctta tccacatcaa ctgtcacttt
    32821 caccttatct ccattgctca atgcctcaga gccatctact gaaacagaca ccccatcatg
    32881 gacagcatct tgttcctcat ctgttgcatc cttcccataa agtttggcaa tcagctcctc
    32941 cctatcaaga gatacggttg cagttccata accatcgtac cccttaaaag aaacagatag
    33001 atattctttc gttcccatct gacaagccgt taacaccaaa actgacaagg ctacaaaacc
    33061 taatcttaat aatttctttt tcatctttct cctacaaacc aggacttctc cagttcattt
    33121 gaatcagcga atagttgcat ggacgccgta acgctccatg ttagctaatt tttcattagc
    33181 tcgcgcattc tggatagctg cccttgccgc ggcatcttcc aaatgagcct gccccttacg
    33241 aagtcgctcc gcctgatcac gcagttgtga aatttgagca ttactccgcg ccaattgttc
    33301 cgccattttt ttctgttgat tcatcacaga ttgctgatgc tgttctgtcc gccaaaggtt
    33361 ggcagcttct tggaaattcg ttgcacggaa atcctgcaac aagaccaaca tacccgcaaa
    33421 atctgtcaaa tttgcaaaat tatcaggaat caaagatagg aaataaagaa gtgtctggtt
    33481 gctttccaat gctaacttat ctgcaaggag cgactgatat tcttgagaat gttccgcttc
    33541 aacagttgct tcttgagtga ccttttcaag ttgtttctta ctaagtacat ttacagtata
    33601 attgagaccg aaagccgaat gttttttatt agtcggtcta gccataagcc acataaagag
    33661 acggactgca gcctgcccaa atagatacat cacccccatc atgaaaagag cgttgaaaaa
    33721 attattgccg agttcaacca ctcccatcag ggcaaaaatg ataccaccaa tattcccatt
    33781 ccgattatac ttagctgttg tagcctgttt aacacgtgta ctaatggtct gttcaacaat
    33841 agaagacatt ttattcttaa tagtaaagaa ttcatcaatc tgcacataca aatactgcaa
    33901 aatatcaatg agttcctcgc gaccaaattg gtttatattt tgttgttctg ccattctttc
    33961 ctatcctctt ctccgttttt ttgcataacc tagtccaaga ccagcaaggg ccgtgtagcc
    34021 taacaatacc aaaaggcttt cttgtgagcc cgtttgtggc agctgtctat acttttcaac
    34081 tctgctataa gtgattggct gtagcttagt acctgcagtt tggttgccat caaagtagcc
    34141 cgcaatctta ccaactttat ctgtgatagc aatcggttga ccgcctgtat cattgatagc
    34201 ttgtcgctga gccacaatct gtgcttgggt ataagcctcc ttcacagcct catattgagc
    34261 tttagcatca cgttggttct tcaataattg atccaactta tcgatttcag cgtcaagggt
    34321 tgctttagca gcagtgtgag cctcgatagc ttttgcaagc tccgcttgag cgtctgcaag
    34381 gacttggtca gcatttttga gtgctacaag cttagccact tgttcagtaa gttgcgcttt
    34441 caatacagta atttcgtctg caatcttagc ttcctcagcc ttcaacacct ttactttcga
    34501 ttgagcttct gcaagaacga cttcgcttgt agacttagct gctttcagtt gagccaattt
    34561 tgcttcttca gcagccaatt gagttttcgc atcttcaaga gctttggtct tggttgccac
    34621 gtcagcgttg aggttgtcaa cagcttgttg ggcatttgtc aagcgagttt ctgctgcttg
    34681 acgagttgca gttgctacag ccaatttagt ttgtgctgca ggtgtttggt cagcaattgc
    34741 ttcaaggctt gcaatagttg cacgagttgc agtaagtgcg gtttgtgcat tatcatttgc
    34801 agttgttgct tgaacaagag cttgtttagc acttgcatcg gttgcaacag cttgtgtttg
    34861 aacagctttt gcatcttcaa gagctttggt cttcgttgct acgtcagcat tgaggttatc
    34921 aacagcttgt tgagcagttg ccaaacgtgt ttcagcagct tgacgagtag cggttgctac
    34981 agccaattta gcttgtgcag ctggtgtttg gtcagcagta gctttcaagg tattcaactg
    35041 atttgtagtt gcttgtaaag ctgattgagc ttgttggttc gctgtagttg cactagcaag
    35101 cgtagattga gcttgtgtat ttgcagctgt ggcttgagcc tgagtcgttt ttgcagtagc
    35161 caattgtgct ttcagagcag ttgtatcgta tggtgatgcg atggtgtttc caccgttgtc
    35221 taagaattga atttcatgtg aacgtccaaa tccatctagt gttacgcttg taacaaatgc
    35281 tccactaagt tttgttgtag atgaacttcc tgatgatgaa atagaacgag tccaaaattc
    35341 attggttata tgagcataat cttggttata atctcctgcc cacgtatcaa tcgacatacg
    35401 ataaatttta cgatataact ccgtcatggt ggtagtttta gaggagatgt aactaattgc
    35461 ttctgaagcg tagtttacat tagtattgcc atcattttct aatgcagtat aactgtgatc
    35521 acctgtatta tcgttttcaa ctgtataatt tttggcaatt tgcatagcag cttgtacagc
    35581 atcttttgta acaacaaaat cttcgttatt ggcaccccaa atttgcttgc ggattgcatt
    35641 gccaatatga acatagtagt gtgataaagc tgttacttgc tcttccgtca tgtttgctgg
    35701 atcaacaacg gttgtgtcaa caggagttac cattgtttta gtatagccaa ccatatcggt
    35761 tgtataccac gtgttgatag catcaaatag agcgtcttta ttaacttgtg aatcatcatt
    35821 tgcaaacttc ttatacgcat cgataacatc ttgtgacagt gttggtgttg ttaagttatc
    35881 aaaagctgcg atgttagctt tcaattctgc cactttgttg tcggcaactg tttttgcagc
    35941 tgctttagtt ttcgcatcag cctgtgcttg tgcaagagct gcagctgttt ggttagcagt
    36001 tgcttgttgt tgtgtttgcg tttgtgttag gcttgcgatg tcgctagcct ttttagcatc
    36061 ggccacttgt gcaacagtaa ggtcactttg agctttggtt tcgtcggctt gggcttgtgt
    36121 aaggtcactt gcagcatcat catgttctgc aatgattgcg gctgctccag taccgtctag
    36181 tgccttctgg gccttatcaa ccgccgtgtt ggcatttacc aagtcagcag ctgcttttgt
    36241 agcgtctgct tgggcttgtg caaggtcgct ggcagtttta tcagccgttg cagattgaac
    36301 agtctcagtc tctttagcag ttgccaagtc acttgctttc ttcgcatcag cttcttgtgc
    36361 tttagtaagg tcgctttgag ctttggtttc gtcagattga gcttgtgtaa ggtcagcttg
    36421 tgcatcatca cgttctgcaa tgattgcggc tgcaccagta ccgtctagta ccgcttgtgc
    36481 attgtctaca gctgttttag cattgtctac aacagtttgt tgggcgtcaa tagcagcttg
    36541 gtcgctgttt actgtagctt gtgcctcatc aacttttgct tcagcagcag ctgtattttg
    36601 tgcagcttga ttcgcattac tttcagcttc agagatagct gttttggtat cttctacagc
    36661 ttcttccgct ttcgcaatgt tctcatcagt cgcttcagct ttacttgctt ctgcgtccgc
    36721 tacagcgcct gtagctgtgt caacagcttc tgcagccgct tcttctgcaa cagtagcatc
    36781 agccaccaca gcagtttggt cagtcacagc ctggtcagca gcagtcttaa tagtagccgc
    36841 ctgatcaacc gttgcttcag tcggtgtttc tgttacaaca gcagtaccat tggtcacgat
    36901 aacacctgat accatctcaa tacctacacc actagctgtc agagacacct cagggctctc
    36961 tacagggctt gtaggggtat ttacagcctc ttcagcatgc acaccatttg caattacaaa
    37021 tgagctaaga gtcgctactc caatagctgt gctctttatc agtttcttgc ccattaattg
    37081 aatctccttt tttagcaatt aggaaaggct tggctgtaaa gtcaagcctt gttatactag
    37141 tataacaagc gatttgtcaa gtattttgtg caatattttc atttttttgt caaaaaaacc
    37201 taaaaatttt acatactttt ccaagtcaac aagagataag aagaacaccc ccatgacaaa
    37261 actttcaccg cttagagaaa tcctcaaaca gccccataaa agcttgtcat cagcccaaag
    37321 gaaaaactga aagcattatt tcccataccc aaattaatca acaccttaaa tacaggaaac
    37381 aactgtgtca attttcagaa gcccacctta ccattatcaa catactacag tagaagtact
    37441 atagcaaatc taacagtact acaatgtcag aaatattctg agcctaaaac caccctaccc
    37501 gccagacaaa gcaaaaaaag aaacgctgat aaatcaacgt ttcttcataa actataccgg
    37561 cggccggggt cgaaccggca cgtccttgcg gacactggat tttgagtcca gcgcgtctgc
    37621 caattccgcc acgccggcat atagttgaac tggggtagct ggattcgaac caacgcatga
    37681 gggagtcaaa gtcccttgcc ttaccgcttg gcgatacccc aatattaaaa taggcgagtg
    37741 aggggaatcg aacccccgaa tgtcagagcc acaatctgat gtgttaacca cttcaccaca
    37801 cccgccatat aacacgggca gtaggaattg aacccacact gaaggttttg gagaccttag
    37861 ttctaccttt aaactatgcc cgtaaaggta tggagagaga gggattcgaa cccccgaacc
    37921 cgaaggagcg gatttacagt ccgccgcgtt tagcctcttc gctatctctc cgaaatataa
    37981 tattaaatta atggcgcgag acggaatcga accgccgaca catggagctt caatccattg
    38041 ctctaccaac tgagctaccg agccaaattc ttaaagaaat tgcgggagca ggatttgaac
    38101 ctacgacctt cgggttatga gcccgacgag ctacctagct gctccatccc gcgataatac
    38161 taaggaggat gtgggattcg aacccacgca cgcttttaca cgcctgacgg ttttcaagac
    38221 cgttcccttc agccggactt gggtaatcct ccgaataata tagtccgtac gggattcgaa
    38281 cccgtgttac cgccgtgaaa aggcggtgtc ttaacccctt gaccaacgga ccatataatg
    38341 ggcacgagtg gaatcgaacc accgacctca cgcttatcag gcgtgcgctc taaccatctg
    38401 agctacgcgc ccaaaccaag tttgggtatg aactatgttc aaagcgggtg acgagaatcg
    38461 aactcgcgac aacagcttgg aaggctgtag ttttaccact aaactacacc cgcttatatg
    38521 ggagttaacg ggatcgaacc gctgaccctc tgcttgtaag gcagatgctc tcccagctga
    38581 gctaaactcc caaattgcta agcgactacc gtatctaaca gggggcaacc cccaactact
    38641 tcaggcgttc tagggcttaa ctgctgtgtt cggcatggga acaggtgtat ctcctaggct
    38701 atcgtcactt aactactgag tcttgtcaac tcaaaattga atatctatat tctaacaaga
    38761 aaccgatcgc ttgtcaatat tgactcgtga gtaattgtac tcgggctaaa tccttggaaa
    38821 a
//
LOCUS       DBNFCX010000010        36517 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.010, whole genome shotgun sequence.
ACCESSION   DBNFCX010000010 DBNFCX010000000
VERSION     DBNFCX010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 36517)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36517)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36517
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.010"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            32..313
                     /locus_tag="AC1PJC_000405"
     CDS             32..313
                     /locus_tag="AC1PJC_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001208493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VRR-NUC domain-containing protein"
                     /protein_id="HIP6619433.1"
                     /translation="MLEKNIENKLTTAVKKAGGIAPKFVSPSFAGMPDRLVLLPDGVF
                     AFVELKAPGESPRPLQKARHRKLRSLGFKVYVIDSIDGIGGMLHELLST"
     gene            294..1637
                     /locus_tag="AC1PJC_000406"
     CDS             294..1637
                     /locus_tag="AC1PJC_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013923822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140658 - ATP-dependent chromatin
                     remodeler activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SNF2-related protein"
                     /protein_id="HIP6619434.1"
                     /translation="MNFSPHNYQSYAIDYIETHPVAAVLLDMGLGKTVISLTAIADLL
                     FDSFEAHRILVVAPLRVARDTWPAEISKWQHLKHLTYAVAVGTVKERKAALSAGADIT
                     IINRENLGWLIDSSGYEFDYDMVIIDELSSFKNHKSKRFQSLMKVRPKVKRIIGLTGT
                     PSSNGLMDLWAEFKLLDFGERLGRFITHYRNNYFIPDKRNGEIIYSYKPMPYAEDAIY
                     RKISDITISMKSTDHLQMPELITSQYEVQLSEEEEQRYEELKADFILELPEGEITAAN
                     AASLTGKLSQLANGAIYDDEGNIVEFHDRKLDALEDIIESANGKPLLVAYWFKHDLQR
                     IKKRFDVREIKTSKDIIDWNNGDIPVAVIHPASAGHGLNLQAGGSTLIWFGLTWSLEL
                     YQQTNARLWRQGQSSGTVVIEHIITKGTIDKRILKALSLKEVSQNALIDAVKANL"
     gene            1695..2114
                     /locus_tag="AC1PJC_000407"
     CDS             1695..2114
                     /locus_tag="AC1PJC_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018659211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1492 domain-containing protein"
                     /protein_id="HIP6619435.1"
                     /translation="MNAKEYLLQARYLDERITSKTQQIASLNDLATRCTTTFSDMPRN
                     PNRGGSRLEDCIIKILDLEDELKADIAKLVNLKKEIMEVIKAVPNVEYQTLLEKRYLC
                     FITWEQIAVDMNYSMQHVHRMHSAALKEIVVPEKDES"
     gene            2230..2601
                     /locus_tag="AC1PJC_000408"
     CDS             2230..2601
                     /locus_tag="AC1PJC_000408"
                     /inference="COORDINATES: protein motif:HMM:NF013964.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HIP6619436.1"
                     /translation="MFRLPRRPKRPCSYPGCPNLTDGRFCEEHVKVEAKRYERYERDP
                     ATKRRYGRAWKRIRDSYAAAHPLCEVCLEKGVYTPTEEIHHMKPLSQGGTHDRENLKA
                     LCKACHARIHAEHGDRWHNKE"
     gene            2710..3264
                     /locus_tag="AC1PJC_000409"
     CDS             2710..3264
                     /locus_tag="AC1PJC_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006702252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P27 family phage terminase small subunit"
                     /protein_id="HIP6619437.1"
                     /translation="MAKDGTNRGGARIGAGAKKKPLADKIAEGNPGKRTLTVIDFDNK
                     AVDLEGQQMPKPSKLLSATQKDGKPLVAEEVYIATWEWLAERKCATLVSPQLLERYAM
                     SVARWIQCEEAISDFGFLAKHPTTGNAIQSPYVAMSQNFMSQTNRLWMEIYQIVKENC
                     ATEYSGATPMDDAMERLLRARKGN"
     gene            3267..4049
                     /locus_tag="AC1PJC_000410"
     CDS             3267..4049
                     /locus_tag="AC1PJC_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001933562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine synthetase N-terminal
                     domain-containing protein"
                     /protein_id="HIP6619438.1"
                     /translation="MIEKVNPSHPDKVADRIAGAIVDLAYKTEAAPKIAVEVLIGHGK
                     CHVIIETTAAINPLDVEDAIHRIAGAVWADIDIVPQDKNLSDNQSDGIRCGDNGIFKG
                     MPLTEEQKALSVIAHDIYTHYPYDGKYIIDEARLIICQSNASTAELSNMYPPAEVNPL
                     GDWTGGTDVDTGATNRKLGSDMADSVTGGGLHGKDLSKADVTLNIYAFLKAQETGKPV
                     QIACAIGDDTIDGHPYQELVDIAAEYITSVGGFEKFAEWGLF"
     gene            4061..5308
                     /locus_tag="AC1PJC_000411"
     CDS             4061..5308
                     /locus_tag="AC1PJC_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017646678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HIP6619439.1"
                     /translation="MQIEKKNVAELLPAEYNPRKDLKPGDPEYEKLKRSIEQFGYVEP
                     VIWNATTGCVVGGHQRLKVLQDMGMTEVDCVVVELDVEHEKALNVALNKISGEWDNDK
                     LALLIADLQGADFDVSLTGFEPAELDDLFKDSTKDNIKEDNFDVAAELQKPTITKTGD
                     LWCLGSHRLYCGDSTKPESYEMLMAGKKANLVVTDPPYNVNYEGTAGKIQNDNMDNDS
                     FYQFLFDAFTNMEQAMTEDASIYVFHADTEGLNFRKAFADAGFYLSGCCIWKKPSLVL
                     GRSPYQWQHEPCLFGWKKSGKHQWYSGRKETTIWEFEKPKKNVDHPTMKPIALIAYPI
                     MNSSMSNCIVLDPFGGSGSTLIACEQTGRICHTIELDKKYADVIVKRYIEQVGTSDGV
                     SVIRDGLTYSYDEVAIEEESDAD"
     gene            5418..5852
                     /locus_tag="AC1PJC_000412"
     CDS             5418..5852
                     /locus_tag="AC1PJC_000412"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619440.1"
                     /translation="MSETTGLTISIPLDKVAVGNLTNLLDAKGTLIKKALGIAELPIF
                     IEEDVISFPWFEEMPAAEECTAYTAFIAALCQMSIKQKRINSAEKPTDNEKYAFRCFL
                     LRLGFIGDAHKATRKILLKNLTGSSAFRNGSPAKEVQEDAIS"
     gene            5839..6057
                     /locus_tag="AC1PJC_000413"
     CDS             5839..6057
                     /locus_tag="AC1PJC_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009269266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4314 domain-containing protein"
                     /protein_id="HIP6619441.1"
                     /translation="MRFPNAAIVERLRNQYPTGTRVELLEMDDVQAPPIGTQGIVLGV
                     DDTGSLMVRWDNGSGLNVVYGIDRVKKL"
     gene            6180..6542
                     /locus_tag="AC1PJC_000414"
     CDS             6180..6542
                     /locus_tag="AC1PJC_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008978739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF7698 family protein"
                     /protein_id="HIP6619442.1"
                     /translation="MTRIELLDKAAESGTRFKDIDINPTFGAAYFYSIDAGNDLINFA
                     EVIWDYDIDPILENCKRLGISEFTISSTFSSLITTIAELQKKGCTLDGLTEINSRYDN
                     WKTGKKERIPAFKMSIAK"
     gene            6556..6798
                     /locus_tag="AC1PJC_000415"
     CDS             6556..6798
                     /locus_tag="AC1PJC_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018659548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF7678 domain-containing protein"
                     /protein_id="HIP6619443.1"
                     /translation="MWHEGTIGIPKGDKYTIAHYWVKAYEEGSEYGINNGRISKLTIK
                     IAGKITANYDRCWDIEPAEDDEATQIAYCILLQNYN"
     gene            6905..8506
                     /locus_tag="AC1PJC_000416"
     CDS             6905..8506
                     /locus_tag="AC1PJC_000416"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014387050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140657 - ATP-dependent activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HIP6619444.1"
                     /translation="MRKLKKYKPTKFKAKDSHYDEEAADYAVNFIECLCHTKGTWAGK
                     PFELIDWQEQIIRDIFGTLKPNGYRQFNTAYVEIPKKMGKSELAAAVALLLTCGDGEE
                     RAEVYGCASDRQQATIVFDVAADMVRMCPALNKRVKILASQKRIVYQPTNSFYQVLSA
                     EAYSKHGFNIHGVVFDELHTQPNRKLFDVMTKGSGDARMQPLYFLITTAGTDTNSICY
                     ETHQKAKDILEGRKIDPTFYPVIYGADESDDWTDPKVWKKANPSLGITVGIDKVKAAC
                     ESAKQNPGEENSFRQLRLNQWVKQAVRWMPMEKWDNCSSRVNEDDLEGRVCYGGLDLS
                     STTDITAFVLVFPPADEDDKYAILPYFWVPEDTLDLRVRRDHVPYDVWERQGFLQTTE
                     GNVVHYGYIEKFIERLGERFNIREIAFDRWGAVQMVQNLENMGFTVVPFGQGFKDMSP
                     PTKELMKLTLEEKLAHGGHPVLRWMMDNIYIRTDPAGNIKADKEKSTEKIDGAIATIM
                     GLDRAIRCGNDTGASVYDNRGILFI"
     gene            8525..9895
                     /locus_tag="AC1PJC_000417"
     CDS             8525..9895
                     /locus_tag="AC1PJC_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014387049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HIP6619445.1"
                     /translation="MSFISGLFRSRDKPTNSINGSSYRFLFGGSTSGKSVNERSAMQM
                     TAVYACVRILSESIAGLPVHLYQYKDGGSKAKAIDHPLYTLLHDEPNPEMTSFVFRET
                     LMTHLLLWGNAYAQIIRNGKGQVVGLYPLMPNRMSVDRDDKGQLYYQYQMQDSDANTG
                     KTGTVTLKPSDVLHIPGLGFDGLVGYSPIAMAKNAIGLSIATEEYGAKFFANGATPGG
                     LLEYPGTVKNPDAIRESWNKGFSGSNSHKVAILEEGMHYTPISISPEQAQFLETRKFQ
                     IDEIARIFRVPPHMVGDLEKSSFSNIEQQSLEFVKYTLEPWIVRWEQSLNRALLTDSE
                     KAAYFVKFNVDGLLRGDYQSRMNGYATARQNGWMSANDIRELENLDRIPPELGGDLYL
                     INGNMTKLEDAGIFAATTAAGKEEDSDEEVLEVEKSDDDKSGDSGTDDGENSVSKRNN
                     RQGKLV"
     gene            9780..10535
                     /locus_tag="AC1PJC_000418"
     CDS             9780..10535
                     /locus_tag="AC1PJC_000418"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001933578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0046797 - viral procapsid maturation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="head maturation protease, ClpP-related"
                     /protein_id="HIP6619446.1"
                     /translation="MKKFWKWKNQMTTNQETQEQTMERTLFLNGTIAKESWFDDDVTP
                     QLFKDELLSGSGDITVWINSPGGDCVAAAQIYNMLMDYKGNVTVKIDGIAASAASVIA
                     MAGTKVLVSPVSMMMIHNPMTVAFGNTGEMEKAIAMLDEVKESIINAYEIKTGLSRAK
                     LSHLMDAETWMNANMAVELGFADEVMKRNEAENDIPQPAVAATYSRVAVTNSLMEKLA
                     AKCHIDSKKVEPEPTGRSVDELMEHLNTIKKYI"
     gene            10551..11735
                     /locus_tag="AC1PJC_000419"
     CDS             10551..11735
                     /locus_tag="AC1PJC_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002362795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HIP6619447.1"
                     /translation="MTIMELREKRNKALDAAKAFLESHRTDKGVLSVEDDATYTNMEA
                     DIDALTNEIHRLERQEQREAEMNKPINTPLTSKPSGNMAHDKRTGRASDAYKDGMLTA
                     LRTNFRQVSNVLQEGVDADGGYLVPEEYDSRLIRVLEGENIMRKLGHKITTSGDHKIN
                     IASTEPAAAWIEEGGALQFSDAKFAQILLDAHKLHVAIKVTEELLYDNAFNLENYIIE
                     EFGKALSNAEEDAFLNGTGVGQPLGLFAATGGGTVYKTVTKLTADDIMNLVYALKRPY
                     RKNSAFIMNDQIIATIRTFKDGNGAYMWQPSYQAGEPDKLLGYPVYTSPFAPEDAISF
                     GDYSYYNIGDRGTRSFKQLTELFAGNGMIGFVAKERVDGKLILPEAVQILKIGSTTTA
                     KA"
     gene            11804..12079
                     /locus_tag="AC1PJC_000420"
     CDS             11804..12079
                     /locus_tag="AC1PJC_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016032 - viral process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="head-tail connector protein"
                     /protein_id="HIP6619448.1"
                     /translation="MLVTLEEMKNYLRVDYDDDDNLIETLMASAKRICMDIVRVDDET
                     LLFEIENAKPAIMYSVAYLYEHREEADHHALTITLRSLLFGSRKEVF"
     gene            12079..12411
                     /locus_tag="AC1PJC_000421"
     CDS             12079..12411
                     /locus_tag="AC1PJC_000421"
                     /inference="COORDINATES: protein motif:HMM:NF017343.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage head closure protein"
                     /protein_id="HIP6619449.1"
                     /translation="MDIGLLNVRITISKNAVTTDAIGNHKNEWVLFYTCHATVSGEAG
                     KEETDAGTIVDDSKIDFTIRWCKKASVLDSTHYRVEFDGELYDIKAVDHMNFKRKCIK
                     LSCQKVRR"
     gene            12414..12797
                     /locus_tag="AC1PJC_000422"
     CDS             12414..12797
                     /locus_tag="AC1PJC_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019116073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HIP6619450.1"
                     /translation="MATKVSIDQMASVIMDGLKEYADLATDDLKAAVKKTGNEVRKQI
                     QSTAPKASGKYSKSWSVKTTKESSNGMEVTVYSRNRYQLAHLLEFGHAKRGGGRVAAR
                     PHIAAAEQAGIESFEQAIERSLRNG"
     gene            12790..13107
                     /locus_tag="AC1PJC_000423"
     CDS             12790..13107
                     /locus_tag="AC1PJC_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006268602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619451.1"
                     /translation="MDRILAILQEIQLPFAYDHFAEGESPEPPFICYLIPGSDNFAAD
                     GKVYVKINEFHIELYTDCKNPALENSVEDVLDNHSIFYNKSEVWIGSEKLYEVLYTFE
                     MEV"
     gene            13111..13686
                     /locus_tag="AC1PJC_000424"
     CDS             13111..13686
                     /locus_tag="AC1PJC_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008088037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="major tail protein"
                     /protein_id="HIP6619452.1"
                     /translation="MGNKVKYNLKNVHAAKLTKTEDGKYTYATPQPIPGAVSISLDAE
                     GDSSPFYADGIVYFRSTANNGYSGDLEIALIPEWFRTDILKETLDKNGVLIESSKVTE
                     MEKFALLFEFDGDVRCIRHVLYNCTASRPSIESETKEDTIEPGTEKLSLTADPREDGL
                     VKSRTGDTTSEATYNDWYKQVYIPVEPTAAG"
     gene            13698..14072
                     /locus_tag="AC1PJC_000425"
     CDS             13698..14072
                     /locus_tag="AC1PJC_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001933595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619453.1"
                     /translation="MLSKTIKVGDKEVAFRSSATIPRLYRAKFKRDIFKDLSKLESSY
                     KGNSEAGSSFAIEDLEIFENVAYIMAYHADHNIPDDIDDWLDQFEMFSIYEVLPEILE
                     LWGTNLITDVESKKNLNAVIAK"
     gene            14069..14233
                     /locus_tag="AC1PJC_000426"
     CDS             14069..14233
                     /locus_tag="AC1PJC_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006268664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619454.1"
                     /translation="MTTALFLLRCVEIGISIAELDLLTIGMVMDIWTEKGNDGATYDN
                     LATQEDFDKF"
     gene            14250..17435
                     /locus_tag="AC1PJC_000427"
     CDS             14250..17435
                     /locus_tag="AC1PJC_000427"
                     /inference="COORDINATES: protein motif:HMM:TIGR01760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016032 - viral process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HIP6619455.1"
                     /translation="MANRIKGITVEIGGDTTKLQTALKGVNGQIKNTQSALRDVEKLL
                     KLDPHNTELLSQKQKLLTQAIGETKEKLATLKTAAEQANEQLQKGEITQEQYDALQRE
                     IIETEAELKRLEQQASTTNATLTKIGDVGSKLESVGNGITNVGKKVSVVSAAVTGMGI
                     ASVKTAADFESSMSQVQATMGITKDSMSNVNGESVNTMEALSDLAKQMGSETAFSASE
                     CAEALNYLALAGYDTQEMVDTLPIVLNLAAAGNIDLASASDMVTDAMSALGMETSEAD
                     TMVDQMAKTASSTNTSVSQLGEGILTIGATAKSIKGGTAELNTALGILANNGIKGAEG
                     GTHLRNVILSLQNPTDKAAACMEQLGVDVYDSQGNMRSLNDILGDLNTSMEGMTSAEK
                     TNIISSIFNKTDLSSVNALLANTGETWDSLQNSITNSAGAAQQMADTQLDNLSGQLTI
                     LKSALEGLAISIGEALMPMVKNIVSKIQGFVTWLNNLDDGTKQVIVKIGLFVAALGPA
                     LVILGTVISKVGVAMQAFSKFGLKITSLVSKAGGLSGVMSKVGTAIMGINPVVIAVVA
                     AIAVLVGAFVHLWNTNEEFRNKIIAIWERIKSIFSGFAQGITDRLNALGFDFENFGEV
                     VSAIWEGLCNFLAPLFEGVFTQIANILEGVLGVITGLLDVFIGIFTGNWSQVWEGVKG
                     IFGSVWDFIKNTFTNYMNIIRNVADVVLGWFGTSWNDVWTGIRDFFVNLWTGIVDFFT
                     GLWEGIKNTVQTAIMFIAAILEAAFDIITLPFRFIWENCKEIIIAVWDAIKEKVSGAI
                     NAISTVVSTVMNAIKTVFTTVWNAIKTHVTTVVNAVKTVITTVFNAIKSVATTVWNGI
                     KTAITTVVDGIKSKVSSVFNSVKSTVSSVFNGIKSTATSVWNGIKSAITTPIEAAKNK
                     VKSVVDAIKGFFSGMKISLPHIKLPHFKVTGSLSIAPPSVPHLSIDWYKNGGIMNRPT
                     IFGMNGSSLMAGGEAGQEAILPLSGFYKQLEAMLDSKMNTAGMERYLAIIADNSSKGI
                     YLEDGTLVGHLLPAIDNGLGKQQKLSRRLAL"
     gene            17432..18082
                     /locus_tag="AC1PJC_000428"
     CDS             17432..18082
                     /locus_tag="AC1PJC_000428"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619456.1"
                     /translation="MRPDILINNISLFQMGWLRESIDFPTPQSQSETVVVPGRNSPIR
                     FTEALGSVSFQPRAFTIVLSMLGTRSDFNNRVTEIINQFAGRLVQVICSEEPTLYCIG
                     TIEVTPSYDPISNKGQLSLSCTDGDAYRYHADETVVQVTGAKTVSLINDFMPVVPTIT
                     TTAETTLAWRIGTDSFTKTVSAGTWEIPELQLAYGSNSVKVTSTGTITFRYREGRL"
     gene            18079..19536
                     /locus_tag="AC1PJC_000429"
     CDS             18079..19536
                     /locus_tag="AC1PJC_000429"
                     /inference="COORDINATES: protein motif:HMM:NF018329.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016032 - viral process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail spike protein"
                     /protein_id="HIP6619457.1"
                     /translation="MSLFKVYVDGSLFYHPNLSKLAITEAQIQEDAENIDSLKLSAPF
                     NHPYLNSIKPMASVIVCKKGNDVVFEGRALDDGSDFYNTHSWTCESCLAYLKDTIQPP
                     FSYKGTLKGLLEYFISIHNKNVEEQKRFILGNVTVKDDNDYISYSNSEYSCTMDAIKN
                     KLINTHGGYLQVRYTSTGKYLDYLEDFTTKSVQTVEFGKNLLNVKITKDHTERITALI
                     PLGAKKKETDEEGTETETDERIDITSVNDGKNYVCDETAIQEIGWIWTSEIWDDVTLP
                     GNLLRKAKARLSDLVKGITSIELTIVDESDTGADIGDIRARMYVECISEPHGIHGTYL
                     CVSRTRDYLNPAGNTITIGACGVTLTAASAKQNKNIAALEDDILGQTSKIESISGKVD
                     TINSQKMYHTELVVDGVSIFKDKGQKSRMHCKVFSWDKDITDSLEAESFIWHRKSSDE
                     AADAEWDKAHRGIKTIIITTEDVQDNASFYCEIIL"
     gene            19548..21362
                     /locus_tag="AC1PJC_000430"
     CDS             19548..21362
                     /locus_tag="AC1PJC_000430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619458.1"
                     /translation="MATILTSSQQTFVDITDQRKLSAYITSNLPKTQSEDPNTLPHEY
                     APSWATTNLVLTPVIFLDQTNISLTATGVTISWKRKDGVAAETSLTSGESVNKGVLTV
                     NTNKLAASDSGMITYICYISYYDSETKNTVNISADITYTLVKNATNARLAYVTADTYV
                     FKYDTSSTLVGASQATLTAQVQGVTISKWQYKNSSGNWADYPTTSDNTSITGGTLVVK
                     PTHAVFVDNVAQIKLVTSDSDVFDTVTITKIYDGAKGDKGATGSAGSGGISIVLGNET
                     QAIACTSAGKTSAASTISIPFTGYVGITQTACTCAVGTLPTGITLKTNTAATATAAGL
                     IELSVAASSNLGADATLTGNINLTFTISGKTATKVFTWTKSKAGSNGTSAVVFSVYAP
                     NGTIVQNQSGKLTLATSAYSGTTAITSATYQWAKYVNGTWTNISGATGSTLEVSGADI
                     INIQSYRCTMTYSSKNYVDVITVEDKSDPYVSEMLSIGGFTVKNNLGGLVPYIIVRTN
                     QQEVDALLGIISETAPSSPKSGDFWYKIDHSAKSVTLMKYSGSAWANATEKQSLTYTW
                     YAQDKDGKEVTFTKTGKVIYLSAADIDSLLTLQCDVSN"
     gene            21378..21935
                     /locus_tag="AC1PJC_000431"
     CDS             21378..21935
                     /locus_tag="AC1PJC_000431"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619459.1"
                     /translation="MALLTSCQHTFQSVVAYEDALDDVEILKIQVHDCYSEIAKTADE
                     ITSTVHDTYIEKTQLETIQKDFQSSITQNSSEIRMDFTAITDEIKGNVAYNQELLEEY
                     IRFKGALIELGRVGNAFTAELSNEELAFKENGQKIAFISNNSLVITNAEIRNKLSLGN
                     ETRGWFDFIPRANGNLSIKWRDPAS"
     gene            21949..23901
                     /locus_tag="AC1PJC_000432"
     CDS             21949..23901
                     /locus_tag="AC1PJC_000432"
                     /inference="COORDINATES: protein motif:HMM:NF017688.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF859 family phage minor structural protein"
                     /protein_id="HIP6619460.1"
                     /translation="MAKSGSITTNEKEGRSITLSWSLSSQDVANNTSTIAWTLKGSGS
                     GSGWVMSGAFKAVINGTTVYSSDTRIQLYNNTTIASGTAKISHNSDGTKSFSLSCEAG
                     VYTYAVSVTASGTHTLDTIPRASTVSATNANMGSASTITITRASSSFTHTLTYSFGST
                     TGTIATKTTSTSVSWTPALTLANQIPNAVSGTCTITCDTYNGSTKIGSKTCTLTLTVP
                     SSVKPTMTSVTATRVDGDVPAAWAIYVQNKSKATVKINGAAGAYGSTISSYSISGGGY
                     SSTASSFTTGFLTTSGTITFTAKVTDSRGRVSDAATVSISVVAYSAPSFTSYLSQRAT
                     SAGVVNDDGTYIRGLISYSYSSCSSKNTVTRAIYYKKSSATSWTNANKSFSSGTAFTF
                     GGGAISTESSYDVKYTITDAFTTVTILDMVSTAAVLMDFKAGGKGIAIGKVAEKDDTF
                     EIALETRHTANITVEKNSPSVRCTNGTNTVSLLVGSGGVNRGVYDSTGDKWLIYQNAN
                     GANIPQSLFIGGHSTAVGTVTDSNSTTAKSCASATWTDTNSLVTVTAGAYIISANLNF
                     AAGTAKRRGARIQISTDGGSTYSNLTNSQILYGGSTTSQTIYVHTSGIASTTSSSGLK
                     IKLQAYQDTGAAINVTSSYLRVVRIA"
     gene            23979..24392
                     /locus_tag="AC1PJC_000433"
     CDS             23979..24392
                     /locus_tag="AC1PJC_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018659236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HIP6619461.1"
                     /translation="MKEFWNTIQLIFTGIGGWLGYFLGGWDGLLYALIAFVVIDYLTG
                     VMCAISDKTLSSEVGFKGICRKVLIFLLVGIAHILDVNVIGSGGVLRTAVIFFYISNE
                     GVSLLENAAHLGLPVPEKIKVVLEQLHDRSESKEE"
     gene            24396..25268
                     /locus_tag="AC1PJC_000434"
     CDS             24396..25268
                     /locus_tag="AC1PJC_000434"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013661.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HIP6619462.1"
                     /translation="MAYTNSSLVSYTKLSPNHSGQRTHSIDRITPHCVVGQCSVETLG
                     SIFYPTSRQASCQYGIGPDGRIGMYVEEKNRSWCSSSNANDQRAITIECASDTTEPYA
                     MNSKVYDALIKLCVDICKRNGKKKLIWLGDKDKTLNYNPKSDEMVITVHRWFANKSCP
                     GNWLYARLGDLATKVTAQLAGTTTTVPETPAATLYRVRKIWSDSKTQKGAFKVLSNAK
                     KCADDNAGYSVFDEKGNVVYTGKNTVVKKTVTELAKEVIAGKWGNGQDRKNRLTAAGY
                     DYTAVQNKVNELLK"
     gene            25389..25634
                     /locus_tag="AC1PJC_000435"
     CDS             25389..25634
                     /locus_tag="AC1PJC_000435"
                     /inference="COORDINATES: protein motif:HMM:NF042617.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SHOCT domain-containing protein"
                     /protein_id="HIP6619463.1"
                     /translation="MNQTENKSVLKTTDIASHLKLEPTPITDIQLQRDYDYFRAQEVA
                     KSMLDSGLISLLEFNKITLLNRQTFSPLYVEIMPEIT"
     gene            25689..27248
                     /locus_tag="AC1PJC_000436"
     CDS             25689..27248
                     /locus_tag="AC1PJC_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018659189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HIP6619464.1"
                     /translation="MKKVTKIDKIQNVTTQKQKLRVAAYCRVSTSNDAQLESLETQKT
                     HYESYITSRDDWQFAGLYFDEGITGTKKDKRPELMRLMQDCAAKKIDFIITKSISRFS
                     RNTTDCLELVRKLQELDVPIYFEKENINTGSMESELFLTILSSMAEGESTSIAENSKW
                     SIKKRFQNGTYKLSYAPYGYRWDGRTLRIVPEQAEVVKRIFADVLSGKGTDAIAKELD
                     DEGVPTKRGGKWTSTSVRGILANEKYTGDVIFQKTYTDDSFNRHTNKGELDMYYVADH
                     HEAIISKEDFEAAGLLISQRAAEKGIKRESQIYQQRYAFSGKIICNECGDTFRRRIHS
                     STYGNYVAWCCNTHLADKDKCSMMFLRDDDLKVAFVTVLNKLIYSHKLVLKPYAAALQ
                     NNSGDDNLIRIQHLERLLEQNTEQRETLTRLMAQGYIDQVLYNSETNALLTQANTYRE
                     DIEVINATMSGDSSRFFEAERLLHFAKRGSMLEEYSEDLFVRFVDHIQVYSRHEVGFV
                     MKCGLTFKEMI"
     gene            27248..27664
                     /locus_tag="AC1PJC_000437"
     CDS             27248..27664
                     /locus_tag="AC1PJC_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008978762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HIP6619465.1"
                     /translation="MGHTPLGYRIENGIAVIDEEAAAKVRQLYKNYLGGLSLTNAAKE
                     AGINALHAGSKRIMQNKHYLGDDFYPAIIDKETFIAAGREIRSRSAKLGRNDRFKEIP
                     EKKAPILFRFGDITEYFDNPVKQAEYLYSLIESEVI"
     gene            27664..29229
                     /locus_tag="AC1PJC_000438"
     CDS             27664..29229
                     /locus_tag="AC1PJC_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019116058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HIP6619466.1"
                     /translation="MGNVMVIPAKRQIGNTGRKQDAKPKLRVAAYCRVSTDSDEQATS
                     YEAQVEHYTEYIKKNPEWEFAGIYADDGISGTNTKNREEFNRMIEDCEAGTIDMIITK
                     SISRFARNTLDCLKYIRQLKEKNIPVFFEKEAINTMDAKGEVLLTIMASLAQQESQSL
                     SQNVKLGLQFRYQNGQVQVNHNRFLGYTKDEEGNLVIDPEQAEVVKRIYREYLEGYSM
                     DKIAAGLEADGILTGAGKPRWHTSTINKILRNEKYIGDALLQKTYTTDFLNKTRVKNT
                     GIVPQYYVEGNHEAIIPREIYMRVQEELVRRRVVKTSANGKKRSYSCNHCFSQIIICG
                     DCGEMFRRIHWNNRGCKSIVWRCISKLEPTGLECHARTINELDLQEIVLTALNELLGD
                     KSKYQKQLQQNIASVIRASAAITTDGIDEKLMELQQELVKKANNKEAYDEIADQIFAL
                     REKRQQASMDTVQRDEQLQRITELQDFIKDQSSDLTVFDEALVKRWLKQIVIWPTHCT
                     VELKSGLKVDVER"
     gene            complement(29279..30886)
                     /locus_tag="AC1PJC_000439"
     CDS             complement(29279..30886)
                     /locus_tag="AC1PJC_000439"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619467.1"
                     /translation="MAGSGLDVMEGVKKMSRTKTDEVIQFMSQYSLEEVLSGIIELQM
                     LLYGHDDTFIPASEYLAVNALYACKEVGNKAFMWRDYEVLEQHAKSACAPNIDELFSE
                     TIKMVNASDEEKQKFLQSKMMQMKGNFYRGDGYIHQLVDVARRLYAPLDNEMESELGF
                     SFTAYEKSIKYIFTQYGIKIAKAYQEKYKFKNMIKAFSCKNKPCLPSIKEGFVFRIYK
                     SELKSIVGDAAYKMLDYMSVKAFDNTFKKVEFEDFKILLSKPFVDFGEYIYMPLLFST
                     LMNIPKQFHYSFIAEKIFDKKTVGIYTGNRGDVVEELTATYLARLIDKNKIYCSLSYL
                     GEDGEADVTTVVNEGMLFCECKSKIITLNSIRGLHESIKTDVYQAIGAAYEQAVRSIE
                     RVQEGKKFVTTSGEEIEIDDIASKYIVCVTAENFGIIPSEIQDYIEIDNVLGIPYVVN
                     VYDLDIITRECKSYEEFIQYIEFRKKNYDVISALDELDAFGFFKKNGNVKISIDADEL
                     MLTDYTSDFDKKYKLEDKKVFQEFFGR"
     gene            complement(31115..32476)
                     /gene="rlmD"
                     /locus_tag="AC1PJC_000440"
     CDS             complement(31115..32476)
                     /gene="rlmD"
                     /locus_tag="AC1PJC_000440"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014634154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HIP6619468.1"
                     /translation="MLKKNDIVEVEVVDLTHEGQGVAKIDGFVFFVDNALPGEKISMR
                     ILKLKKNIGFGKVEQWQSFSPDRNQDLDLTYLRTGIADLGHLTYPAQLAFKKKQVENS
                     LRKIAGISEIAVADTLGMDNPLAYRNKAAVPVRRVNVQLETGFFRKNSHDLVPIEDFY
                     IQHKEIDALVLATRDLLRKLDLKPYDEKEQTGLVRNIVVRRGHYSGQLMLVLVTTRPK
                     IFRVETLIERLTSQFPNLVSIVQNINDQNTNAIFGQEFRLLHGSETIADTMLGNEFEI
                     SAPSFYQVNTEMAEKLYQTAIDFAELSADDVVIDAYSGIGTIGLSFAKQVKHVYGVEV
                     VEKAVLDSQKNAARNGIDNVTYVCDSAESAMQKWVADGIKPTVIFVDPPRKGLTESFI
                     KASTSVKPEKIVYISCNVATMARDIKRYEELGYKLKKVQPVDLFPQTHHVETVCLMSR
                     KEK"
     gene            complement(32543..33865)
                     /locus_tag="AC1PJC_000441"
     CDS             complement(32543..33865)
                     /locus_tag="AC1PJC_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0070726 - cell wall assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HIP6619469.1"
                     /translation="MNKNNNILTHHEQLRLDYLQKNIHYLNDKESRELDYLLYKKELR
                     ERHGSPRQSLRSFTPTAYEDDFEEDYFEEDDEQEELLPRYPERRSRKTRQAKPQRFQS
                     PRIEPKAKVPKPKKARKKGGFKRFIGFVLLAIALVIVAMGYSFFKGMNSVSEKPVAEV
                     FNGVDTSNGTNILILGTDGRVGESSGETRTDTIMVLNVNNTDNKIKLVSFMRDTLVDI
                     EGYEYKLNTAYTLGEQDNQQGAEEVRKALKNNFDIDVKYYAMVDFATFATTIDTLFPE
                     GVTIDAQFSTINGEVVSSVEVPNDLQLEENAPAYQTIQVGVQQMDGKTLLNYARYRSD
                     DEGDFGRTRRQQEVLSAVMTQAKNPMKLFSGSEAIGKVVAMTPTTVPQSFMWLQGPGL
                     LLDAANGIERVTIPENGDWIDDYDMYGGMALRVDFEKYQQRLAELGLR"
     gene            complement(33877..34704)
                     /gene="pheA"
                     /locus_tag="AC1PJC_000442"
     CDS             complement(33877..34704)
                     /gene="pheA"
                     /locus_tag="AC1PJC_000442"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HIP6619470.1"
                     /translation="MQVAYLGPRGSFTHQVAQQAFPTADLQAFETITEVIKAYETGEV
                     TYSVIPVENSIEGSVHETIDYLFHQAEIHAVAEIVQLIAQQLLATSADKAVEVIYSHP
                     QAIAQGKKYIQEHFPQARIEITASTAYAARFVAEHPEQPFAAIAPQAAAVEYGLEVIA
                     QDIQEISENFTRFWILGDKAPSIALEQVAKKVSLALTLPDNLPGALYKAMSVFSWRGI
                     SLTKIESRPLKTALGEYFFILDLDNQSEELLAYSQKELTSLDITYKVLGNYLVYMTS"
     gene            complement(34695..35186)
                     /locus_tag="AC1PJC_000443"
     CDS             complement(34695..35186)
                     /locus_tag="AC1PJC_000443"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004765 - shikimate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HIP6619471.1"
                     /translation="MPIVLLGFMGVGKTTTAHLLNLPVYDMDHIIEERIGMPIADYFS
                     LEGEASFRQLETEVLKELLDLPSNCIVSTGGGVIKSEVNRELLLANRENNVLLTASFE
                     VSYQRISKDRQSQRPLFLQYSKEEFEALYRERMALYQGLADTVIDTDKLNPEQVARKI
                     LCK"
     gene            complement(35195..36475)
                     /gene="aroA"
                     /locus_tag="AC1PJC_000444"
     CDS             complement(35195..36475)
                     /gene="aroA"
                     /locus_tag="AC1PJC_000444"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HIP6619472.1"
                     /translation="MKLRKNVEKLQGVIRVPGDKSISHRSIIFGSLAKGVTRVHDILR
                     GEDVLSTMQVFRDLGVKIEDNGDIVEVHGVGFDGLQAPKNDLDMGNSGTSIRLISGVL
                     AGQDFEATMFGDDSLSKRPMDRVTIPLSQMGVEISGQTERDLPPLTIKGNKNLKPIRY
                     QLPVASAQVKSALIFAALQAEGESVIVEKELTRNHTEDMIVQFGGQLEVNGKEIRIQG
                     GQEFIAQEITVPGDISSAAFWLVAGLIVPGSKIVLENVGINETRTGILDVIKAMGGKM
                     TLSNIDELAKSATITVETSELKATEIAGELIPRLIDELPIITLLATQAHGTTIIRDAE
                     ELKVKETDRIQVVADALNSMGATIEPTEDGMIIHGPTALHGAEINTFGDHRIGMMTAI
                     AALLAKDGEVVLERAEAINTSYPAFFEHLNSLMD"
BASE COUNT        10961 a         7868 c         7663 g        10025 t
ORIGIN      
        1 taagaaatta aaccctgatg ggaggatgac aatgttagaa aaaaatatag aaaacaagtt
       61 aacaaccgca gtaaaaaaag ctggtggtat tgcaccaaag ttcgtgtctc ctagtttcgc
      121 aggaatgccc gaccgccttg tattactgcc tgatggggtg tttgcttttg tagagcttaa
      181 ggctcccggt gaaagcccac gccctcttca aaaagcaaga cacagaaagc ttcgttcact
      241 aggcttcaag gtctacgtga tagatagcat tgatgggatt ggaggtatgc tgcatgaact
      301 tctctccaca taattatcag tcctatgcga ttgattatat cgaaacgcat cctgtagctg
      361 ctgtactgct cgatatgggt cttggcaaga cggttatttc tctgactgcc atcgcagacc
      421 tgttgttcga cagctttgaa gcacatcgta tcttagtggt cgctccactt cgagtggccc
      481 gtgatacatg gccagcagaa atatcaaaat ggcagcacct caagcatctg acttatgcag
      541 tcgctgttgg aactgttaaa gaaagaaaag ctgcactttc ggctggtgca gacatcacaa
      601 ttatcaacag agaaaatctg ggatggttga ttgatagcag cggatatgaa tttgattacg
      661 atatggtgat tatcgatgag ctctcttctt tcaaaaatca caagtcaaaa agattccagt
      721 ccttgatgaa ggtacgacca aaggtaaaac gaatcatcgg tttgactggt acgccaagtt
      781 ctaatggctt gatggattta tgggcagaat tcaaacttct ggattttgga gagcgccttg
      841 gccgcttcat cacccactat cgcaacaact acttcattcc agataagaga aatggtgaaa
      901 tcatctactc ttacaaacct atgccttatg cggaagatgc catctacaga aaaatatcgg
      961 atatcacgat ttccatgaaa tcgaccgacc atctgcagat gcctgagttg attacttcac
     1021 aatacgaggt tcagttatcc gaagaggaag aacagcgcta tgaagaactc aaagcagact
     1081 tcatattaga gcttcctgaa ggtgaaatca ctgctgctaa tgctgcttct cttacaggta
     1141 agctatcaca gcttgctaat ggagccatct atgatgatga aggcaatatt gtggaattcc
     1201 atgatagaaa gctcgatgcc ttagaggata ttatcgaatc cgcaaatggt aaacctcttc
     1261 tggtggccta ctggttcaag catgatttac agcgtatcaa gaaacgcttt gatgtcagag
     1321 aaatcaagac cagcaaagat atcatcgact ggaataatgg tgatattcct gtagcggtca
     1381 tacatccagc ttctgcaggt catggtttga accttcaggc tggcggttcc acacttatct
     1441 ggttcgggtt gacatggtcg ctggaattat atcagcaaac caacgcccgt ttatggagac
     1501 aaggccaatc ttccggtacc gtggttattg aacatatcat taccaaaggc accatcgaca
     1561 aaagaatctt gaaggcctta tctctaaaag aagtatcaca gaatgcactt atcgatgcag
     1621 taaaagccaa tctatgacaa tctaagaaaa tctatgccaa tccaagggaa aatcttatat
     1681 tccggaggta ttgcatgaac gcaaaagaat atttattaca ggctcgttat cttgatgagc
     1741 gtattacttc aaaaacacag cagatagcat cccttaatga tttagctact agatgcacta
     1801 ctacattttc tgatatgcct cgtaatccaa atcgtggtgg ttcccgtttg gaagactgca
     1861 ttataaaaat attggatttg gaagatgagc taaaagccga tatcgcaaag cttgtaaatc
     1921 tcaagaaaga aatcatggag gttatcaagg cggttcctaa tgtggaatat caaacccttc
     1981 ttgaaaagcg atatctttgc tttatcacat gggagcagat tgctgtggat atgaactact
     2041 ctatgcagca tgtccatcgt atgcacagtg cagctttgaa ggaaatcgtg gttccagaaa
     2101 aggatgagag ctaatgtgat agaatgagag tcttctctta tgatagtatt acaatagaga
     2161 aaaagaaaat cacaggaagc cttgtaggtc acacccgacc cacagggctt ttcttatgcc
     2221 tacaaggagg tgtttcgttt gccaagacga ccaaagagac cctgttctta tcccggctgt
     2281 cccaacctaa ctgacggtcg cttctgtgaa gaacatgtca aggttgaggc caagcgctac
     2341 gaacgatacg aacgtgaccc tgctaccaag agaaggtatg gcagagcttg gaagcgtatc
     2401 agagatagct acgctgctgc ccatccgctt tgtgaagtct gccttgagaa aggtgtgtac
     2461 acgccaaccg aggagataca tcacatgaag cctctatccc aaggtggaac acacgacaga
     2521 gagaacttga aggccctttg caaagcgtgt catgcaagga ttcatgctga acatggcgac
     2581 cgctggcaca acaaagaatg accctagggg ccggtcaaat ctctacagca aatctcccgt
     2641 ggaacgggcg tggggtcaca cgcgcaaagt cgcggtttca aacagggtat ataaggaggt
     2701 gcatgaatta tggctaagga cggtacgaac cgtggtggcg ctcgcatcgg cgctggagcc
     2761 aaaaagaagc ccttagctga caaaatcgct gagggcaatc cgggcaagag aacgttgact
     2821 gtcatcgact tcgataataa agcagtcgat ttagaaggtc agcagatgcc caaaccatcc
     2881 aagctgttat ccgctactca gaaagatgga aaaccgctgg tggctgaaga agtttatatt
     2941 gcgacatggg agtggctggc agaacgcaag tgtgcaacac tcgtttctcc tcagctgctt
     3001 gaacgctatg cgatgagcgt cgccagatgg atacaatgcg aagaagccat atctgatttt
     3061 ggtttccttg caaagcaccc tactactggt aatgctatcc aatcacctta tgtagcaatg
     3121 agtcagaact tcatgagcca gaccaacagg ctctggatgg aaatctatca aattgtaaaa
     3181 gaaaattgcg ctaccgaata tagcggtgct actccaatgg acgatgctat ggagcgcctg
     3241 cttcgcgcaa ggaaaggaaa ctaactatga ttgaaaaagt aaatccaagt catccggata
     3301 aggtggcaga tagaattgct ggtgcaattg ttgacttagc ttataaaaca gaagctgctc
     3361 caaagattgc agttgaagtc cttatcggac atggtaagtg ccatgtgatt attgaaacta
     3421 ctgctgctat caatccatta gatgttgaag atgcaattca cagaatcgcc ggtgcagtat
     3481 gggcagatat tgatattgtt ccacaggata agaatttatc tgataaccag tctgatggta
     3541 ttcgttgtgg tgataatggt atcttcaagg gaatgcctct tacagaggaa caaaaagctc
     3601 tatctgtgat tgcgcatgat atttacacac attatccata tgacggaaag tacattattg
     3661 atgaagcaag acttatcatc tgtcagagta atgcttctac tgctgagctt tctaatatgt
     3721 accctcctgc agaagtcaat ccgctcggtg attggactgg aggtacagat gttgatactg
     3781 gcgctactaa cagaaagctg ggaagtgata tggctgactc tgtcactggt ggtggtcttc
     3841 atggtaaaga cttatctaag gccgatgtca cacttaatat ctacgccttc ttaaaagcgc
     3901 aagaaacagg aaagccagta cagattgcct gcgctattgg tgatgacacc attgatggac
     3961 atccatatca agaactcgta gatattgcag cagaatatat tacatccgtt ggtggctttg
     4021 aaaagttcgc tgaatgggga ttgttttaag gaggtcgctt atgcagatag aaaagaaaaa
     4081 cgtcgcagag cttcttcctg cagagtacaa ccctcgtaag gatttgaaac ccggcgaccc
     4141 tgaatacgaa aagttaaagc gctcaattga gcagtttggt tatgtggaac ctgttatctg
     4201 gaatgccact actggatgtg tagttggtgg acaccagcga ttaaaggtgc ttcaggatat
     4261 gggtatgaca gaagttgact gcgtagttgt tgagcttgat gtcgaacatg aaaaagcatt
     4321 aaatgtcgca ctgaataaaa tcagtggtga atgggataac gataaattag cattattgat
     4381 tgcagacctt caaggcgctg actttgatgt ttcccttaca ggttttgagc ctgcagaact
     4441 tgatgattta ttcaaagatt ctacaaagga caatatcaaa gaagataact ttgatgttgc
     4501 tgcagaatta cagaagccta ccatcaccaa gaccggagac ctttggtgtc ttggttccca
     4561 ccgtctttac tgcggcgaca gcactaaacc tgaatcctat gaaatgctga tggctggaaa
     4621 gaaagcaaat cttgtggtga ccgaccctcc gtataacgta aactacgaag gcactgccgg
     4681 taagattcag aacgataaca tggataacga ttctttctat caattcttat ttgatgcctt
     4741 caccaacatg gaacaggcta tgaccgaaga tgcttccatc tacgtcttcc acgctgatac
     4801 cgaaggcttg aactttagaa aagcattcgc tgatgcaggc ttctatttgt ccggttgctg
     4861 tatctggaag aaaccttctc ttgtgcttgg tcgttctcca tatcagtggc agcatgaacc
     4921 atgcctgttt ggttggaaga agtccggcaa gcatcagtgg tattccggta gaaaagaaac
     4981 tactatctgg gaatttgaaa agcctaagaa aaatgtcgac catcctacaa tgaagccgat
     5041 tgctttgatt gcatatccga ttatgaattc cagcatgagc aactgcatcg tacttgaccc
     5101 gtttggtggt tccggcagta cgcttatcgc ctgtgaacag acaggtcgta tctgccacac
     5161 aattgaatta gataaaaaat acgcagacgt catcgtgaag cgctacattg aacaggtagg
     5221 tacttctgat ggcgtttctg ttatccgtga tggccttact tattcctatg atgaggtagc
     5281 catcgaagaa gaatccgacg ctgattgata gacaaaaacc acactttcta aaggcacata
     5341 tttgttggat atatagcttg ctattatgtg cctttagagt gattaatgta ctaccaaatc
     5401 aaaaggagga tttcattatg tcagaaacta ctggacttac aatttccatt ccactggata
     5461 aggtcgcagt tggcaacctt accaaccttc tggatgcaaa aggaacactc atcaaaaagg
     5521 ctcttggtat tgcagagctt ccaatcttca tcgaggaaga tgttatttct tttccttggt
     5581 ttgaagagat gcctgctgct gaagaatgca cagcctacac tgcttttatc gcagcccttt
     5641 gccaaatgag catcaagcag aaacgaatca actcggctga gaaacctacg gataatgaaa
     5701 agtatgcttt ccgctgcttc ctgcttcgcc ttggatttat cggtgatgca cataaggcaa
     5761 caagaaaaat cttacttaag aacttaaccg gaagctccgc tttcagaaac ggttcacctg
     5821 caaaggaggt gcaagaagat gcgatttcct aatgcagcaa tcgttgaacg tttaagaaac
     5881 caatatccta ctggtactcg cgttgagctc ttggagatgg atgacgtaca ggctccacca
     5941 atcggaaccc aaggaatagt tcttggagtt gatgatactg gaagcttgat ggtgcgctgg
     6001 gataacggtt ccggactcaa tgttgtatat ggaattgacc gcgtaaaaaa gctgtaaatt
     6061 acacactttt tgcggctgat atttgtcaca tatataactc taattagctt gctattatgt
     6121 gcttttagag tgatatatag tactaccaaa aggaaacaca catttaggag gaacctacca
     6181 tgacaagaat tgaattatta gacaaagcag cagaaagcgg aacacgcttc aaggacatcg
     6241 acatcaaccc aaccttcggt gcagcctact tctacagcat tgacgcaggc aacgacctta
     6301 tcaacttcgc cgaagttatc tgggattacg acatcgaccc aatccttgaa aactgcaagc
     6361 gacttggaat cagcgagttt accatcagct caaccttctc aagccttatc acaacaattg
     6421 cagaacttca gaaaaaagga tgcacccttg acggacttac agaaatcaac agccgctacg
     6481 acaactggaa aacaggtaag aaagaacgca ttcctgcatt caagatgagc attgcaaagt
     6541 aatgaggcga tgagcatgtg gcacgaagga accatcggaa ttccaaaagg tgataagtac
     6601 accatcgccc actactgggt taaagcctac gaagaaggaa gcgagtacgg aatcaacaac
     6661 ggtcgtattt ccaagctgac cattaagata gccggtaaga ttactgccaa ctacgacaga
     6721 tgctgggaca tcgaaccagc tgaggatgat gaagcaacac agattgccta ctgcatcctc
     6781 ttacagaatt acaactaaga acccggaaat ataaaatccc ggatgcagag ccgtaaggcc
     6841 ctgtatctcg ttatgtcggt cgcaatgatg cggctatttt ttatgccctt ttggaggtga
     6901 aaacttgaga aaactgaaaa aatataagcc gacaaagttc aaagctaagg attcccacta
     6961 cgatgaggaa gctgccgatt acgcggtgaa ttttatcgaa tgcttgtgtc acactaaagg
     7021 aacatgggcc ggtaaaccct ttgaactgat agattggcag gaacaaatca taagagatat
     7081 cttcggtaca ttaaagccga atggttatcg acaattcaat acagcttatg tggaaattcc
     7141 taagaagatg ggaaaatctg aacttgctgc agctgtcgcc ctactgctta cttgcggcga
     7201 tggtgaggaa cgagctgaag tatatggctg cgcatctgac cgccagcagg cgaccatcgt
     7261 ttttgacgtt gctgcagata tggtgcgtat gtgtccggcg cttaataaaa gagtaaagat
     7321 acttgcttct cagaagcgta tcgtgtacca accgacaaac agcttctatc aggtactttc
     7381 tgctgaggct tattcaaagc atggtttcaa tattcatggc gttgtttttg atgagcttca
     7441 cacgcagcca aacagaaaac tgtttgatgt tatgaccaaa ggttccggcg atgctcgtat
     7501 gcagccgctc tatttcctta tcactactgc tggtactgat acaaatagca tctgttatga
     7561 aacacaccag aaagcaaagg atattttaga gggaagaaaa atcgacccaa ccttctatcc
     7621 cgttatctat ggtgctgatg aatcagatga ttggactgac ccgaaggtct ggaagaaagc
     7681 gaatccttcc cttggtatca cagttggcat cgataaagta aaagctgctt gtgagtctgc
     7741 aaagcaaaat cccggtgaag aaaactcctt tagacaactt cgtctgaacc agtgggtaaa
     7801 acaggcagtc agatggatgc caatggaaaa atgggataac tgctcctccc gtgtaaatga
     7861 agatgacctt gaaggtcgtg tctgttatgg cggactagac ttgtcttcca ctacagatat
     7921 cactgcattt gtattggtgt ttccacctgc agatgaagat gataaatatg caattcttcc
     7981 atacttctgg gtaccggaag atacgctaga ccttcgtgtc agacgagacc atgttcctta
     8041 tgatgtctgg gagcgccaag gcttcctaca gacaaccgaa ggtaacgtcg ttcactacgg
     8101 ttacattgaa aaattcatag agcgacttgg tgagcgattc aacattagag aaatcgcctt
     8161 tgaccgttgg ggtgctgtcc agatggtaca gaaccttgag aacatgggat tcactgttgt
     8221 tccatttggt cagggcttca aagatatgtc accacctact aaggagctta tgaaactaac
     8281 acttgaagag aaactggccc acggtggtca tccagtactg cgctggatga tggataacat
     8341 ttatatccgc actgacccgg ctggaaatat taaagcagat aaagagaaat ctacagagaa
     8401 gattgacggt gccattgcaa cgattatggg ccttgaccgt gcaatccgct gtggaaatga
     8461 taccggtgct tctgtctacg ataacagagg cattttgttt atttagaaag gctggtgatg
     8521 atatatgagc tttatttctg gtttatttcg ttcaagagat aagcccacaa atagtattaa
     8581 cggaagcagc taccgcttct tgtttggtgg aagcacctct ggcaaatcag taaatgaacg
     8641 ttctgccatg cagatgactg cagtttatgc ctgcgtccgc attctttcag agtctattgc
     8701 tggattacca gttcatcttt atcagtacaa agatggtggt tctaaagcaa aagctatcga
     8761 ccatccgctt tacaccttgc ttcatgatga accaaatcct gaaatgacat cctttgtatt
     8821 cagggaaaca ctcatgacgc acctgctttt gtggggcaat gcttatgcac agattatccg
     8881 caatggtaaa ggtcaggtcg ttggcttgta tccgctaatg ccaaatcgaa tgtcggttga
     8941 tagagatgac aaaggccagc tctactacca atatcaaatg caggattctg atgccaatac
     9001 aggtaaaaca ggaaccgtaa ccttgaagcc atcagatgtg cttcatatac cgggccttgg
     9061 ctttgatggt ttggtcggat actctcccat cgctatggct aaaaacgcaa ttggtctttc
     9121 cattgctacg gaagaatatg gtgctaagtt cttcgctaat ggcgctacac cgggaggcct
     9181 tttagagtat ccgggaacgg taaagaatcc cgatgccatc agagaaagct ggaacaaagg
     9241 cttctctggc agcaactctc ataaagttgc aatcttggaa gaaggtatgc actacacacc
     9301 tatttccata tctccagaac aagcacagtt tctggaaaca agaaaatttc agattgatga
     9361 aatagctcga atctttagag tgccaccgca tatggtcggt gacctagaga aatcgagctt
     9421 ttctaatatt gagcagcaat cactggaatt cgtgaagtac acgctggagc cttggatagt
     9481 tcgttgggaa caatccttga accgtgccct tcttacagat tcagagaaag ctgcttattt
     9541 tgtcaagttc aatgtcgatg gtttgcttcg tggtgattat cagagccgaa tgaacggcta
     9601 tgccaccgca agacagaatg gctggatgtc agctaatgac attcgtgagc ttgagaacct
     9661 agaccgcatt ccacctgaac ttggtggtga cttatatctc atcaatggaa acatgaccaa
     9721 gctggaggat gcaggtattt ttgcagcgac cactgctgct ggaaaggagg aagattccga
     9781 tgaagaagtt ttggaagtgg aaaaatcaga tgacgacaaa tcaggagact caggaacaga
     9841 cgatggagag aactctgttt ctaaacggaa caatcgccaa ggaaagctgg tttgatgatg
     9901 acgtcacacc gcagcttttt aaggatgagc tgctttcagg tagcggtgat atcactgttt
     9961 ggattaattc tcccggtggt gattgcgtcg cagctgccca aatttacaac atgctgatgg
    10021 attacaaagg caatgtcaca gtcaaaatcg atggtattgc agcatctgct gcatctgtca
    10081 ttgcaatggc aggtacaaaa gtgctggtct ctccggtatc catgatgatg attcacaatc
    10141 cgatgactgt tgcttttggt aatacaggtg agatggaaaa agctatcgca atgcttgatg
    10201 aagtcaaaga atccattatc aacgcctatg aaatcaagac cggtcttagc cgcgccaagt
    10261 tatctcatct catggatgct gaaacttgga tgaatgcaaa tatggctgtt gaacttggat
    10321 ttgctgatga agtaatgaag cgtaatgaag ctgaaaatga tattcctcag cctgctgtag
    10381 cagcaaccta ctctcgcgtt gcagttacaa attctcttat ggagaagctc gctgcaaaat
    10441 gtcacatcga ctcgaaaaaa gtcgagccag aacctactgg tcgctctgtt gatgaactta
    10501 tggagcacct taacacaatc aagaaataca tttaatggag gtaaataacc atgactatta
    10561 tggaacttcg cgaaaagcgt aataaagctt tggatgcagc taaagcattc cttgaatctc
    10621 atcgtaccga caagggtgtt ctttctgtcg aggacgatgc tacttacaca aatatggaag
    10681 cagatattga tgctcttaca aatgaaatcc acagacttga acgtcaggaa cagcgtgagg
    10741 ctgagatgaa caagcctatc aatactccgc ttacttctaa gccttccgga aatatggcac
    10801 acgacaagag gactggtcgt gcatctgatg cctataagga cggtatgctt actgcccttc
    10861 gtacaaactt ccgtcaggta tctaatgtat tacaggaagg tgtggatgct gatggtggct
    10921 accttgtacc tgaagagtac gacagccgct taatccgtgt tcttgaaggc gaaaacatta
    10981 tgcgtaagct tggccacaag attactactt ctggcgacca caaaatcaac attgcttcta
    11041 cagagcctgc agcagcatgg attgaggaag gtggcgcact tcagttctct gatgctaagt
    11101 ttgcacagat tttactggat gcccacaagc ttcacgtagc tatcaaggta actgaagagt
    11161 tgctttatga caatgctttc aaccttgaaa actacatcat cgaggaattc ggtaaggcgc
    11221 tttctaacgc tgaggaagat gcattcctta acggaacagg tgtaggacag cctcttggac
    11281 ttttcgctgc aactggcggt gggactgttt ataagactgt aactaagctt actgcagacg
    11341 acatcatgaa ccttgtatat gcacttaagc gtccttacag aaagaactcg gcattcatta
    11401 tgaatgacca gattatcgct actatccgta ctttcaagga tggtaatgga gcatatatgt
    11461 ggcagccttc ttatcaggct ggtgaaccgg ataagcttct tggatatcct gtttacactt
    11521 ctccttttgc acctgaagat gcaatctcct tcggtgatta cagctactac aacatcggcg
    11581 accgtggtac tcgttccttc aagcagctta ctgagctttt tgcaggtaac ggtatgattg
    11641 gcttcgttgc taaggaacgt gtcgatggta agcttatcct tcctgaagca gtacagattt
    11701 tgaagattgg cagcactact actgctaagg cttaagaaat ctaacagcgg tgccattcaa
    11761 gttagagtgg catcgctgat ttcaagattg gaggcgatga gcgatgcttg taacactaga
    11821 agaaatgaag aattatctgc gcgtggatta tgacgatgat gataacttaa tcgaaacgct
    11881 catggcatct gccaaacgta tctgcatgga tattgtcaga gtcgatgatg aaactcttct
    11941 ttttgaaatc gagaatgcaa agcctgcaat catgtacagc gttgcatatc tatatgaaca
    12001 cagagaagaa gctgaccatc acgctcttac tattactctt cgttcacttt tatttggttc
    12061 ccgtaaggag gtcttctgat ggatattggt ttattgaatg ttcgcataac aatttcaaaa
    12121 aacgcagtca caacagacgc catcgggaat cataaaaatg agtgggtact cttctatacc
    12181 tgccatgcca ccgttagtgg tgaggctgga aaagaagaaa ccgatgcagg cactatcgta
    12241 gatgattcta aaatcgactt tactatccgc tggtgcaaga aagcatctgt gcttgactct
    12301 acgcattatc gcgttgaatt tgacggtgag ctttatgaca tcaaggctgt tgaccatatg
    12361 aatttcaaac gcaaatgcat caaattatcc tgccagaaag tgaggcgata gctatggcga
    12421 caaaagtatc tattgaccag atggcatccg ttatcatgga tggccttaag gaatatgctg
    12481 accttgctac agatgattta aaagcagctg ttaagaaaac tggtaatgaa gtcaggaagc
    12541 agattcaatc tactgctcca aaagccagcg gtaaatatag caaaagctgg tctgtaaaaa
    12601 cgaccaagga atcttccaac ggtatggaag tgactgttta ttcaaggaac agatatcagc
    12661 ttgcgcatct tttggaattt ggtcatgcca aacgaggtgg cggtcgtgtt gctgcaagac
    12721 ctcatattgc tgcagcagaa caggctggta ttgaatcatt tgaacaggcc attgaaagga
    12781 gcttaagaaa tggatagaat tcttgctatt ttacaggaga tacagcttcc ttttgcatac
    12841 gaccactttg ctgagggtga atctcctgaa ccaccattta tctgttatct gattcccggc
    12901 agtgataact ttgctgccga cggaaaggtc tacgtgaaga taaatgaatt tcatatcgag
    12961 ctgtataccg actgcaaaaa tcctgcactc gaaaacagcg tcgaggatgt gctagataat
    13021 cacagcattt tctataacaa atccgaagtc tggattggga gcgaaaagct ctatgaagtc
    13081 ctatatacat ttgaaatgga ggtataaatc atgggcaata aagtaaaata caatcttaaa
    13141 aatgttcatg ctgcaaagct tacaaaaaca gaagacggta agtacaccta cgctacacct
    13201 cagcctattc cgggtgcagt aagtatcagt cttgatgctg agggtgattc cagtccattc
    13261 tatgcagacg gtatcgtata tttccgttct actgcaaaca atggttatag cggcgacctt
    13321 gaaatcgcat tgattcctga atggttccgc acagacatct tgaaggaaac cttggacaag
    13381 aacggtgttc ttatcgaaag ctctaaggtt actgagatgg agaaatttgc actgctattt
    13441 gaatttgatg gtgatgttcg ctgcatccgt cacgttcttt ataactgcac tgcttctcgt
    13501 ccttctattg aatctgaaac caaggaagat actatcgagc cgggtacaga gaaactttct
    13561 cttactgctg accctcgtga ggatggcctt gttaagagta gaaccggtga taccactagc
    13621 gaagcaacat acaacgattg gtacaagcag gtatatattc ctgttgagcc taccgctgct
    13681 ggttaaggag gaatcgtatg cttagtaaaa ctatcaaggt tggcgataaa gaagtcgcct
    13741 tccgctcttc tgctacaatt ccaagactct atcgtgcaaa gttcaaaaga gacatcttca
    13801 aagacctgtc taaactggaa tcctcttata agggtaacag tgaggcaggt tcttcttttg
    13861 ccatcgagga cttggagata tttgaaaacg tggcctacat catggcttac catgctgacc
    13921 acaacattcc agatgatatc gacgattggc ttgaccagtt tgaaatgttc tctatttacg
    13981 aggttcttcc agaaattctt gaactctggg gtacaaatct gattaccgac gtggagtcta
    14041 aaaaaaactt aaacgcagta atcgcaaaat gacaactgca ctcttccttc tgcgctgcgt
    14101 agaaatcggt atctccattg ctgagcttga cctgttaacc atcggaatgg tgatggatat
    14161 ctggacagaa aaaggcaacg acggagctac ttatgacaat cttgcaacgc aggaggattt
    14221 tgacaaattc taaaaggagg taaccgccaa tggcaaatag aatcaaaggt attaccgttg
    14281 aaattggcgg cgataccact aaactacaaa ccgccttaaa aggtgtaaac ggtcagatta
    14341 aaaacacgca gtctgcccta cgagatgtag aaaagctgtt aaaacttgac cctcacaaca
    14401 cagaactact ttctcaaaag caaaaattac tgacacaagc tattggagaa accaaagaaa
    14461 agctagccac acttaagact gctgctgaac aagccaatga acagctacaa aaaggtgaaa
    14521 taacacaaga gcaatatgat gctctacaaa gagaaatcat cgaaaccgaa gctgaattaa
    14581 aacgattaga acagcaagct tccactacta acgctacgct tacaaagatt ggtgatgtag
    14641 gttccaagct tgaatccgtt ggtaacggaa ttacgaatgt tggtaagaag gtatctgttg
    14701 tatctgctgc agtaactgga atgggcattg cttccgtaaa gaccgctgct gattttgaaa
    14761 gttcaatgag tcaggtacag gcgacaatgg gaatcaccaa agattccatg tcaaatgtaa
    14821 atggcgaaag cgtcaataca atggaggccc tttccgacct tgcaaagcag atgggttctg
    14881 agacagcctt ctctgccagt gagtgtgccg aagcattaaa ctatctagcc cttgctggat
    14941 acgatacaca ggaaatggtc gatactctac caatagtact gaaccttgct gccgccggta
    15001 atatcgacct tgcttctgct tctgacatgg tcactgatgc tatgtctgcc cttggaatgg
    15061 aaacatccga agcagataca atggttgacc agatggccaa aacagcatcc agcaccaaca
    15121 cttctgtatc acagctaggt gaaggcattc ttaccattgg tgcgactgca aaatcaatca
    15181 aaggcggtac tgcagaatta aatactgcac ttggtatcct tgcaaacaat ggtatcaagg
    15241 gagccgaagg tggtactcat cttcgtaacg tcattctttc cttacagaat cctaccgata
    15301 aagctgctgc ctgcatggaa cagctcggtg ttgatgttta tgattcacag ggaaatatgc
    15361 gttctttgaa tgatatcctt ggtgatttaa ataccagcat ggaaggtatg acctctgcgg
    15421 agaagacaaa tatcatcagt tccatcttca acaaaactga cctttcctct gtaaatgccc
    15481 ttcttgcaaa taccggtgag acttgggata gcttgcagaa ctccatcact aacagcgccg
    15541 gtgctgcaca gcagatggct gatacacagc ttgataactt atccggtcag cttacaattc
    15601 ttaaatctgc gttagaggga cttgccattt ccatcggtga agcattgatg ccaatggtaa
    15661 aaaacatcgt ttctaagatt caaggattcg ttacttggct gaataatctt gatgatggca
    15721 caaaacaggt catcgttaag attggattat ttgttgctgc tctaggccca gcgttagtaa
    15781 ttctaggaac cgtgatatcg aaggtcggtg tcgcgatgca agcctttagt aaattcggac
    15841 tgaaaataac aagtcttgta tcaaaggctg gtggtttatc cggagtgatg agcaaagtcg
    15901 gtaccgcaat catgggtatc aacccggttg taattgcagt cgttgctgct attgctgttt
    15961 tggttggtgc cttcgttcat ctttggaata ccaatgaaga gttccgaaat aagattattg
    16021 ccatctggga acgtatcaag agcatctttt caggatttgc acaaggtatc accgatagac
    16081 ttaatgcact tggttttgac tttgagaact tcggtgaagt ggtatctgcc atctgggaag
    16141 gattatgcaa tttcttagca cctctttttg agggcgtgtt cacacagatt gcaaatatcc
    16201 ttgaaggcgt tcttggtgtt atcaccggat tacttgacgt ctttatcggt atattcaccg
    16261 gtaactggtc tcaggtatgg gaaggtgtca aaggaatatt cggctctgta tgggacttta
    16321 tcaagaatac atttaccaac tatatgaata tcattcgtaa tgttgctgat gttgtacttg
    16381 gttggttcgg tacaagctgg aatgatgtat ggactggtat cagagatttc tttgtaaatc
    16441 tatggactgg aatcgtcgac ttcttcaccg gtctgtggga aggcatcaaa aatacggttc
    16501 aaaccgccat tatgtttatt gcagcaattc tggaagctgc ctttgatatc atcactcttc
    16561 catttagatt tatctgggag aactgcaaag aaatcattat tgcagtctgg gatgctatca
    16621 aagaaaaagt atccggagca atcaatgcga tatctacagt tgtcagcacc gtaatgaatg
    16681 cgataaaaac tgtctttact acggtttgga acgccatcaa gacgcacgta acaactgttg
    16741 taaatgcagt aaaaactgtc atcaccaccg tattcaacgc tataaagagc gttgctacta
    16801 ccgtatggaa tggtatcaaa acagccatca ctactgtcgt tgacggtatt aagagtaaag
    16861 tatcctcagt atttaattct gtaaaaagca cggtatcttc tgtgtttaac ggaatcaaat
    16921 ccactgccac ttctgtatgg aacggtataa agtcggctat cacaacacca attgaagctg
    16981 caaagaacaa agtaaaatct gttgttgatg cgattaaggg cttcttctcc ggaatgaaga
    17041 tttctttacc tcacatcaaa ttaccgcact tcaaggtgac tggctctcta tctatcgcac
    17101 cgccaagcgt acctcatctt tcaatcgact ggtacaaaaa cggtggtatt atgaatcgcc
    17161 ctaccatctt tggtatgaac ggtagttcac tgatggctgg tggtgaagct gggcaagaag
    17221 caatcctgcc actgagcgga ttctataaac agcttgaagc aatgcttgat agcaaaatga
    17281 atactgctgg catggaaaga tatcttgcaa tcatcgcaga taacagttcc aagggtattt
    17341 acttggaaga tggaaccctt gttggtcacc ttcttcctgc aattgataat ggccttggaa
    17401 aacaacagaa attatcaagg aggcttgcac tatgagacca gatatattaa tcaataacat
    17461 ctcacttttt cagatgggct ggcttagaga aagcatcgac tttccaacac cacaatctca
    17521 gagtgaaacc gtcgttgttc ccggtcgcaa ttctccaatc agattcacag aggctcttgg
    17581 ctcggtatca ttccagccaa gggcctttac tatagttttg tcaatgcttg gaacacgaag
    17641 cgatttcaat aacagagtga ctgagataat aaatcaattt gctgggagac ttgttcaggt
    17701 aatctgttct gaagaaccaa cactctactg tatcggaacc attgaagtca ctccatcgta
    17761 tgaccctatt tcaaataaag gtcagctcag tcttagctgc actgatggtg atgcttatcg
    17821 ttatcatgcc gacgaaaccg ttgttcaggt aaccggagct aaaaccgttt cgctaataaa
    17881 tgattttatg ccggttgtgc ctacaatcac cactactgcc gaaactaccc ttgcatggag
    17941 aattggtaca gattctttta ccaaaacagt cagcgcaggc acttgggaaa tccctgaact
    18001 acagcttgcc tacggaagca actccgtgaa agtgaccagc actggaacaa ttactttcag
    18061 atacagggag ggccgcctat gagtttattc aaagtatatg tggacggttc tttattctat
    18121 catccgaatc tttcaaagct tgcaatcact gaggcccaga ttcaggagga cgcagaaaac
    18181 atcgatagcc taaaactatc cgctccgttt aatcatccct acctgaattc tattaaacca
    18241 atggcttctg taattgtctg taagaaagga aatgatgtcg tatttgaagg acgtgcctta
    18301 gatgatggca gtgattttta caatacccat tcttggactt gtgaatcctg ccttgcttat
    18361 ctaaaagata caatccagcc acctttttca tataaaggaa cgctcaaagg attgctggaa
    18421 tatttcattt ccatccacaa caaaaatgtg gaagaacaga aacgcttcat ccttggaaat
    18481 gtaacggtca aagatgataa cgattatatt tcctatagca attccgagta ttcctgcaca
    18541 atggatgcca tcaaaaataa gctgataaat acgcatggag gctatcttca ggtgcgttat
    18601 acatcaaccg gtaagtatct ggattatctt gaggacttta ctaccaaatc agtgcagacc
    18661 gttgaattcg gtaaaaacct tttgaatgtc aaaatcacaa aagaccatac cgaacgtatt
    18721 actgcgctta tccctcttgg tgctaaaaag aaggaaaccg acgaggaagg aaccgagaca
    18781 gaaaccgatg aacgtatcga tattacttct gtcaatgatg gaaaaaacta tgtttgtgat
    18841 gagacagcaa tccaagaaat cggctggatt tggacttctg aaatctggga tgatgtaacg
    18901 cttcccggta atctactaag aaaagcgaaa gcccgattat cagacttggt taaaggcatc
    18961 accagcatag aacttaccat cgtagatgaa tcagatactg gcgctgatat cggagatatt
    19021 cgtgctcgta tgtatgtgga atgcatctcc gaaccacatg gcattcatgg cacttatctt
    19081 tgtgttagcc gcaccagaga ttacttaaat cctgctggta acacaatcac tattggagcc
    19141 tgcggtgtaa ctcttactgc tgcttctgca aaacagaata agaatatcgc tgcccttgaa
    19201 gatgacattc ttgggcagac ttcaaaaata gaatctatat ctggaaaagt cgataccatc
    19261 aattcacaga aaatgtatca tacagagctt gtggttgatg gtgtcagcat tttcaaggat
    19321 aaaggccaga aaagccgaat gcactgcaag gtgttctctt gggataaaga catcaccgat
    19381 tcccttgaag cagaaagctt tatatggcat agaaagtcct ctgatgaggc tgctgacgct
    19441 gagtgggata aagctcatcg cggcataaaa acaatcataa tcacaacaga ggatgttcag
    19501 gataatgctt ccttctattg tgaaatcatt ttataggagg ttatttcatg gctacaattt
    19561 tgacatccag ccagcagacc tttgtggata ttactgacca aaggaagctg tcggcatata
    19621 ttacttcaaa tcttcctaag acacagagtg aagacccaaa tactctgcca catgaatatg
    19681 cacctagctg ggcaacaacc aatcttgtat tgactccagt tatctttctt gaccagacca
    19741 acatctcttt gaccgctacc ggtgtaacaa tctcttggaa acgtaaggat ggcgttgctg
    19801 ctgagacatc acttacatct ggagaatcag tcaacaaagg tgttcttaca gttaatacaa
    19861 acaagctagc tgcttctgat tctggcatga ttacttacat ctgctacatc agctactacg
    19921 attctgaaac caagaacaca gtcaacatct ctgctgatat tacttatacc ttggtaaaga
    19981 atgcaaccaa tgcaagactc gcatacgtaa cagcggatac ctatgtattc aagtacgaca
    20041 cctcttctac tttagttggt gcttctcagg ccactcttac tgcacaggtt cagggcgtaa
    20101 ccatcagcaa atggcagtac aagaacagtt ctggcaactg ggcagattat cctactacat
    20161 ctgataatac aagcattact ggtggaacat tggtggttaa acctacgcat gcagtattcg
    20221 ttgataacgt ggctcaaatc aagcttgtga caagcgattc tgatgtattt gatactgtaa
    20281 ccatcactaa gatttatgac ggtgccaagg gcgataaagg tgctacaggt tctgcaggaa
    20341 gcggcggtat ttctattgtt ttaggaaatg aaactcaagc aatagcatgt acctctgcag
    20401 gcaaaacatc tgctgcatca actatctcca ttccatttac cggatatgtt ggtatcacac
    20461 agacagcttg tacctgcgca gttggaacct tacctactgg catcacctta aagactaata
    20521 ctgctgcgac tgctacagct gcaggtttaa ttgaattatc tgttgcagcc tcttcaaacc
    20581 ttggtgctga tgctaccttg accggaaaca tcaatctgac atttacaatt tcaggaaaaa
    20641 cagccactaa ggtatttact tggacgaaat ccaaagcagg aagcaacggt acatccgcag
    20701 ttgttttctc tgtatatgca cctaatggaa ctatcgtaca gaaccagtct ggaaagctca
    20761 cgctggccac ttctgcttat agtggaacta ctgctatcac aagtgctact tatcagtggg
    20821 ctaaatatgt gaatggtaca tggacaaaca tcagcggtgc taccggttcc accttggaag
    20881 tctctggcgc agatattatc aacatccagt cttaccgctg cacgatgaca tattccagca
    20941 agaactatgt tgacgttatc acagttgaag ataaatctga cccttatgta tcggagatgc
    21001 tttccatcgg tggatttact gttaagaaca atcttggcgg tcttgttcca tatatcatcg
    21061 tcagaacaaa ccagcaggaa gtagatgccc ttcttggcat tatcagtgaa actgcacctt
    21121 caagtccgaa gtccggtgat ttctggtaca agattgacca tagcgctaag tccgtaacgc
    21181 ttatgaaata tagcggttct gcatgggcca acgccaccga aaagcaaagc cttacttaca
    21241 cttggtacgc acaggataag gacggtaagg aagtaacatt cacaaagacc ggaaaagtta
    21301 tctatctttc tgcagctgat attgatagct tgcttacttt acagtgtgat gtttctaact
    21361 gatgggaggt gtaatgaatg gcgctattaa cttcatgcca gcataccttc cagagtgtgg
    21421 tagcttatga ggatgcttta gatgatgtag aaatcctgaa gattcaggtg catgactgct
    21481 actcagaaat tgcgaaaact gcagatgaaa ttaccagtac cgttcatgat acctacattg
    21541 aaaagactca gttagaaacc attcagaaag atttccagtc tagcattact caaaacagca
    21601 gcgaaatacg tatggacttt actgctatca ctgatgagat aaaaggaaac gtagcttata
    21661 accaagagct tctggaagaa tacatccgat tcaaaggtgc ccttattgag cttggcagag
    21721 ttggtaatgc cttcactgcc gagctatcca atgaggagct tgccttcaag gaaaacggtc
    21781 agaaaatcgc ttttatctca aataatagct tggttattac caatgcagaa atacgaaaca
    21841 aattatctct tggaaatgag accagaggct ggttcgactt tattccaaga gcaaatggta
    21901 atctctccat caaatggcga gaccctgcat cttaaggagg aatgattcat ggctaaaagc
    21961 ggaagcataa caacaaatga aaaagaaggt cgttccatta cgctgtcgtg gtcattatcc
    22021 agtcaggatg tagcgaacaa cacttctact atcgcatgga cacttaaagg ctctggttcc
    22081 ggttcaggct gggttatgtc tggtgccttc aaagcggtca tcaatggaac aacagtatat
    22141 tcaagtgata ccagaatcca gctgtacaac aatacgacaa tcgcttctgg aacagcaaaa
    22201 atcagtcata actcggatgg taccaaatca ttcagtttaa gctgtgaagc cggtgtttat
    22261 acctacgcag tcagcgttac tgcaagtggt acacataccc ttgatacgat tccaagagcc
    22321 tcgaccgtat cggccaccaa tgcgaatatg ggttcagcat ctacaattac gattacacga
    22381 gcatcatcct cgtttacaca tactttgact tattcctttg gaagcaccac aggaactata
    22441 gcaacgaaaa caacatcaac atcggtatca tggacgcctg ctcttacact ggcaaatcag
    22501 ataccaaatg cagtatccgg aacctgcacc atcacttgtg atacctataa tggctcaacg
    22561 aagattggct ccaaaacttg tacgcttact ttaactgtac catcatcagt taaaccaaca
    22621 atgacgagcg tcactgccac gcgcgttgat ggtgatgttc cggcagcatg ggccatttat
    22681 gttcaaaaca aatcgaaagc aactgtaaaa atcaacggtg ctgctggagc ttatggttca
    22741 acaatatctt cctactctat ttcaggtggt ggatattcaa gtacagcatc cagctttaca
    22801 accggatttc ttaccacttc aggaaccatt acctttactg caaaagttac agattccaga
    22861 ggacgagtat ccgatgctgc gactgtcagc attagtgttg ttgcttattc agcaccttcc
    22921 tttacaagtt atctttcaca aagagcaacc agcgcaggtg ttgtaaatga tgatggaact
    22981 tatatccgag gtcttatctc ttacagctac tcttcctgca gcagcaagaa cactgtaacc
    23041 cgtgcaatct attataaaaa gtcatctgct acttcatgga ctaatgcaaa taagagcttt
    23101 tcttcaggaa ctgcgtttac ttttggtggc ggtgcaattt caacagaaag ttcctatgat
    23161 gtcaaatata ccattactga tgctttcacc actgtaacaa ttcttgatat ggtctcaacc
    23221 gcggctgtat tgatggactt caaagccggt ggtaaaggaa tcgctattgg taaagttgca
    23281 gaaaaagacg acacatttga aatcgccttg gaaacaagac atactgcaaa cataactgtt
    23341 gaaaaaaact caccttcagt aaggtgtaca aatggcacaa atactgtttc acttcttgta
    23401 ggcagtggtg gtgttaacag aggtgtttat gatagtaccg gagataagtg gttaatttac
    23461 cagaacgcaa atggtgcaaa tatcccacag agtttattta tcggcggaca ctctaccgca
    23521 gtgggtactg tcacagattc caactctacg acagctaaat cttgtgctag tgcaacttgg
    23581 acggatacta attctcttgt aactgttact gcaggtgcat atattatctc agctaatctg
    23641 aacttcgctg caggaaccgc taaacgacgt ggtgcaagaa ttcagatatc cactgacggc
    23701 ggcagtactt atagcaacct tacaaattca caaatactct atggaggaag tacaaccagc
    23761 cagaccatct atgttcatac aagtggtatc gcatcaacga cttcttctag cggtttaaaa
    23821 atcaaattac aggcatatca agatacaggt gctgcaatca atgttacgtc ctcttatttg
    23881 agggtcgtca gaattgctta gcatcttcta ttttggaatc aagcatctct tcggaggtgc
    23941 ttttttcata ccaatttata gaaatggagg actcaaacat gaaggaattt tggaacacaa
    24001 tccagctcat cttcacaggc attggcggct ggcttggcta ctttcttggt ggctgggacg
    24061 gactgcttta tgcgcttatt gcctttgtgg taatcgacta tctcactggg gtcatgtgtg
    24121 caatcagtga caaaacgctt tctagcgaag tcggcttcaa aggtatctgt cgcaaggtgc
    24181 ttattttctt gcttgttgga attgcccaca ttcttgatgt aaatgttatc ggctcaggcg
    24241 gtgtgcttcg cactgcggtc atcttcttct acatctccaa tgaaggcgtt tctcttcttg
    24301 aaaatgcagc tcatcttgga cttccagtac cagaaaaaat caaggtcgta ttagaacagc
    24361 ttcacgaccg ctcagaaagc aaggaggaat aaaacatggc ttacacaaac agctcattgg
    24421 tatcctatac caaacttagt ccgaaccact ccggacagag aacgcattcc attgaccgca
    24481 tcacacctca ctgtgttgtt ggtcagtgca gcgttgaaac attaggtagt attttctacc
    24541 ctacttcaag acaggccagc tgccagtacg gtattggtcc tgatggtaga attggcatgt
    24601 atgtcgaaga gaagaaccgt tcttggtgct cttccagcaa tgcaaatgac cagagagcaa
    24661 ttactattga atgcgccagc gacaccactg agccttacgc tatgaacagc aaggtttatg
    24721 atgcacttat caagctttgc gttgatatct gcaagcgtaa tggtaagaag aaacttatct
    24781 ggcttggaga taaggataag acccttaact acaatcctaa atctgatgag atggtaatca
    24841 ctgtgcatag atggtttgcc aacaagtcat gtccgggtaa ctggctttat gctagacttg
    24901 gcgacttggc aacaaaggtt acagctcagc ttgcaggaac aacaactact gttcctgaaa
    24961 cacctgctgc aactttatat cgtgtacgta agatttggtc tgatagcaag actcagaaag
    25021 gtgccttcaa ggtattaagc aatgctaaga agtgcgctga tgataatgct ggctacagcg
    25081 tattcgatga aaaaggaaat gtggtttaca caggtaaaaa tactgttgta aagaagaccg
    25141 tcacagaact tgccaaggaa gttatcgccg gcaaatgggg taacggtcag gatagaaaga
    25201 accgtcttac cgctgctggt tatgactaca ctgctgtaca gaataaagta aatgaattac
    25261 tgaagtaatt ggatgcccat tggagtttcg tgctctgatg ggcatttttt tattgtcttt
    25321 ctccgctcaa aatcacttct tatctccagt gggaaagtga aggcatagct ttcagattgg
    25381 aggatattat gaatcaaact gaaaacaagt ctgttcttaa aaccacagac attgcatctc
    25441 acttaaaact ggagcctact ccgattactg atattcaatt acagcgcgat tatgattatt
    25501 tcagagcaca ggaagttgca aaatcaatgc tggattctgg acttatttcc ttgttggaat
    25561 tcaacaaaat aacgcttctt aaccgccaaa cattctctcc gctatatgta gaaataatgc
    25621 cggaaataac ttgataaata cagcttttag agtgatgtat atacactgac gaagggaggt
    25681 gaactaccgt gaagaaggtt acaaaaatcg acaaaatcca gaatgtaaca acccaaaagc
    25741 agaagcttcg tgtggcagct tattgtcgtg tttctaccag caatgatgct cagcttgaaa
    25801 gcttagaaac acagaagaca cactacgaaa gctacattac ttctcgtgac gattggcagt
    25861 tcgccggtct gtattttgat gaaggtatca caggtaccaa gaaagataaa cgtcctgaac
    25921 taatgcgcct gatgcaggat tgcgctgcta agaaaataga ctttatcatc accaagtcca
    25981 tcagccgatt ctcaagaaat acaactgact gcttggaact tgtaagaaag ctgcaggagc
    26041 tggatgttcc aatctacttt gaaaaagaaa atatcaacac cggctcaatg gaaagcgaac
    26101 tgttccttac aatcctaagt tcaatggccg agggtgaatc cacatctatt gccgaaaaca
    26161 gcaagtggtc aattaaaaag cgattccaga atggaaccta caaactcagt tatgcacctt
    26221 acggataccg ctgggatgga cgtacacttc gcattgttcc tgaacaggct gaagttgtaa
    26281 aacgcatctt cgctgatgtt ctttccggta aaggaaccga tgccatcgct aaagagcttg
    26341 atgatgaggg tgttccaacc aaacgcggtg gcaaatggac atcaaccagt gtcagaggca
    26401 ttcttgctaa cgagaaatac accggcgatg ttattttcca gaaaacctat actgatgact
    26461 ccttcaacag acatacaaac aaaggtgagc ttgatatgta ttacgtagct gaccaccatg
    26521 aagcaattat cagtaaagag gattttgaag ccgcaggact tttgatatca cagcgagctg
    26581 ccgaaaaagg catcaagcgt gaaagccaaa tataccaaca gcgctatgca ttctctggaa
    26641 aaatcatttg caacgagtgc ggtgatactt ttagaagaag aatacactcc agcacctacg
    26701 gcaattacgt agcatggtgc tgcaacaccc atctggcaga taaagataaa tgctccatga
    26761 tgtttctcag ggatgacgat ttgaaggtag cattcgttac cgttcttaac aaactaatct
    26821 acagccacaa gctagtcttg aaaccttatg ctgctgcact tcagaacaat tccggtgatg
    26881 ataatcttat cagaatccag cacttagagc gccttttgga acagaataca gaacagcgag
    26941 aaaccttaac cagattaatg gctcaaggtt atatcgacca agttttgtat aacagcgaaa
    27001 caaacgccct tcttacgcag gctaacacct acagggagga cattgaagtt atcaatgcca
    27061 ccatgagcgg tgacagctca aggttctttg aagcagaacg tctactccac tttgcaaagc
    27121 gtgggtcaat gcttgaagaa tacagcgaag atttatttgt gagatttgta gaccacattc
    27181 aggtgtattc cagacatgaa gtcggatttg ttatgaagtg tggtcttact tttaaggaga
    27241 tgatttgatg ggacatacgc cacttggcta tcgcatcgag aatggcatcg cagttatcga
    27301 tgaagaagct gcagctaagg tgcgacagct atacaagaat taccttggcg gtctttcact
    27361 tacgaatgct gctaaggaag ctggaatcaa tgcactgcat gctggttcca agcgaattat
    27421 gcaaaacaag cattatctcg gtgatgactt ttatccagcc atcatcgata aggaaacctt
    27481 cattgctgca ggtagagaaa tcaggagcag gtcagccaaa cttggtcgca acgatagatt
    27541 caaagaaata cctgagaaga aggctccgat actcttccgc ttcggcgata tcacagagta
    27601 ttttgacaat ccagtaaaac aggctgagta cttatacagc cttatagaaa gcgaggttat
    27661 ttgatgggaa atgtaatggt cattcctgcc aaacgacaaa ttggtaatac cggtcgtaag
    27721 caggatgcaa agcctaagct ccgagtcgcg gcgtactgta gagttagtac tgacagcgat
    27781 gagcaggcta caagttatga agctcaggtt gagcactata cagaatatat taagaagaac
    27841 cctgaatggg aatttgccgg aatatacgct gatgatggta tttccggtac caacaccaag
    27901 aacagagaag aattcaaccg catgattgaa gattgcgaag ctggtaccat cgacatgatt
    27961 atcacaaaat caatcagccg atttgccaga aacactctag actgcttgaa gtacatcagg
    28021 cagcttaagg aaaagaacat accggtattc tttgaaaaag aagcaatcaa tacaatggat
    28081 gccaagggtg aagttcttct tacgattatg gcttcactgg cccaacaaga atcacagtcc
    28141 ttaagtcaga acgtaaagct tggacttcag ttccgctacc agaacggtca ggtacaggtt
    28201 aatcacaatc gcttccttgg ctacactaaa gatgaagaag gaaaccttgt tatcgacccg
    28261 gaacaagctg aagttgtaaa acgaatctac cgtgagtacc tcgaaggcta cagcatggat
    28321 aagattgctg caggtcttga agcggatggt attcttaccg gcgcaggaaa accacgatgg
    28381 catacaagca ccatcaacaa gattctccgc aatgaaaaat acatcggtga tgcccttctt
    28441 caaaagactt acaccaccga ttttcttaac aagaccagag ttaagaacac tggcatcgtt
    28501 ccacaatatt atgttgaagg aaaccacgaa gcgattatcc caagagagat ttacatgcga
    28561 gtgcaggaag aattggtacg caggcgagta gttaagacca gcgccaatgg taagaaacga
    28621 agctatagct gcaaccactg cttttcacag attattattt gcggtgactg cggcgaaatg
    28681 ttcagaagaa tacactggaa caaccgtggc tgcaagtcca tcgtctggcg ctgcatcagc
    28741 aagctagaac ctacgggcct tgaatgccat gccagaacca tcaacgagct tgacctgcag
    28801 gaaatcgtac ttactgcctt gaatgagctt cttggtgata aatcaaaata ccagaaacaa
    28861 ttacagcaga atatcgcatc ggtcatcaga gcttctgctg caatcaccac tgatggtatt
    28921 gatgagaagc ttatggaact tcagcaggag cttgtaaaaa aggccaacaa caaggaagcc
    28981 tatgacgaga ttgccgacca gatttttgca ctcagagaaa agcgccagca ggcctcaatg
    29041 gacacggtac agcgtgatga acagctacag cgcatcacag aattgcagga tttcatcaaa
    29101 gaccaatctt cagaccttac tgtattcgat gaagcccttg taaaacgctg gcttaagcaa
    29161 atcgtaatct ggccaactca ctgcaccgtt gaattgaaat ctggactcaa ggtcgatgtt
    29221 gaaagataag catagacgca caaaaccctc ccagccatga tggttgagag ggttgttttt
    29281 atcgtccaaa gaattcctga aatacctttt tatcttcgag cttatatttt ttatcaaaat
    29341 cagatgtgta atcagttaac atcaattcat cagcatcaat cgaaatcttc acatttccat
    29401 ttttcttaaa aaagccaaat gcatcaagtt catctaatgc tgaaataaca tcataatttt
    29461 tctttctgaa ttctatatac tggataaatt cctcgtatga tttacattct cttgtaatta
    29521 tatccaagtc ataaacgttg accacatatg gaatgcctaa gacattatca atttctatat
    29581 aatcctgtat ttctgacgga attattccaa aattctcagc agtaacacaa actatatatt
    29641 ttgatgcgat atcatctatt tcaatttctt ctccagatgt tgtaacgaat ttctttcctt
    29701 cttgtactct ttcgattgac ctgactgcct gctcataagc cgcacctatg gcttgatata
    29761 catctgtttt aatgctttcg tgtaaccctc ttattgaatt cagtgtaata attttactct
    29821 tacactcaca gaagagcata ccctcattca caactgtagt gacatcagcc tcaccatctt
    29881 ctccaagata agaaaggcta caatatattt tattcttatc tatcaacctt gctaaataag
    29941 tagcagtaag ttcctcaact acatccccac gatttccagt ataaattcca acggtctttt
    30001 tatcgaatat cttctccgca ataaaggaat aatggaattg tttaggaatg ttcatcaaag
    30061 ttgaaaatag taacggcata taaatatact ccccaaagtc aacaaaaggc tttgataata
    30121 aaatcttaaa gtcctcgaat tcgactttct taaaagtatt atcgaaagct tttacactca
    30181 tataatcgag cattttatat gctgcatcac ctacaattga cttcaactca gacttatata
    30241 tcctaaaaac aaatccttcc ttaatgcttg gaagacaagg tttatttttg caagaaaagg
    30301 cttttatcat atttttgaat ttatattttt cttgataagc tttggcaatt ttaatgccgt
    30361 attgtgtgaa aatgtatttt attgattttt catatgcagt aaatgaaaaa ccaagctcac
    30421 tttccatttc attatcaaga ggtgcatata agcgtctggc aacgtcgact aactgatgaa
    30481 tataaccgtc gcctctataa aagttgccct tcatctgcat catttttgac tgtagaaatt
    30541 tttgtttttc ttcatcactg gcatttacca ttttaattgt ttcggaaaaa agttcatcta
    30601 tattaggtgc acaggcactc tttgcatgtt gttctaagac ttcataatcc ctccacataa
    30661 aagctttatt accaacttcc ttgcaagcat ataaggcatt tactgctaaa tattcagaag
    30721 ctggaataaa tgtatcatca tgtccataga gaagcatttg aagctctatg attccagaaa
    30781 gaacctcttc caatgaatac tgcgacataa actgaatcac ttcatctgtt ttcgttctac
    30841 tcattttctt cactccttcc ataacatcta atccactgcc tgccatattg ccaacagtcg
    30901 agttgccgga ttagacaaca tctaaatcac tcactcaaat tgagttagca ccctagataa
    30961 catctatcct agtgccacaa cccactacat ctaatccaca gcctaaaccc tctgaccgtt
    31021 tttacagtgg atatgtttca atataagaaa tacggacttt catgagctac ctactaatct
    31081 caaaaaagcc cgtaaatacg ctacttttcg ctatttattt ctctttccta gacatcaaac
    31141 agaccgtctc aacgtgatgc gtttgcggga ataggtcaac gggttggact tttttgagtt
    31201 tatagcctag ctcttcatat cgcttaatat cacgcgccat ggttgccaca ttacaggaga
    31261 tatagacgat tttctctggt tttacagaag tacttgcttt gataaaactt tctgtcaaac
    31321 cttttctcgg aggatcgaca aagatcactg ttggtttaat accatctgcc acccattttt
    31381 gcatagcgga ttctgcacta tcacagacat aggtaacatt atcaatccca tttcgagcag
    31441 cattcttctg actatcaaga acagcctttt caacgacttc tacaccgtaa acatgcttaa
    31501 cttgttttgc aaaggagaga ccaattgtcc caatacctga ataggcgtca atcacgacat
    31561 catctgccga caattctgca aaatcaatgg cggtctgata gagtttttca gccatttctg
    31621 tgttgacttg atagaaagac ggtgcagaaa tttcaaattc attgcccaac atggtatctg
    31681 caatagtttc actgccatgc aaaagacgga attcttgacc gaatatagca ttggtattct
    31741 ggtcattaat attctgaacg atagaaacaa gatttggaaa ttggcttgtc aaacgctcaa
    31801 taagggtttc aacacggaaa atcttcggac gagtcgtaac taaaactagc atcaactgac
    31861 ctgaataatg accacgacga acaacaatat ttctcacaag tcctgtctgt tctttctcat
    31921 cgtaaggctt caagtctaat tttctcaaga ggtcacgtgt cgctagaacc aaggcatcaa
    31981 tttccttatg ttgaatgtaa aaatcctcaa tcggaactaa atcatgtgaa ttttttcgga
    32041 agaatcctgt ttctaactgc acattcacac gacgaactgg aacagctgcc ttattacgat
    32101 aagcaagagg attgtccatt cccaacgtat ctgctactgc tatttctgaa atgcctgcaa
    32161 tcttacgtag actattctca acttgttttt tcttaaaagc tagttgggct ggataagtga
    32221 gatgccccaa gtcagcaata cctgttctta gataggtcaa atccaagtcc tgattacggt
    32281 ctggtgagaa gctctgccat tgctccacct tgccaaaacc aatatttttc ttaagtttta
    32341 agatgcgcat ggaaattttc tcgcctggga gagcattgtc tacaaagaag acaaaaccat
    32401 caatttttgc cacaccctgc ccctcatgtg tcaaatctac aacttctact tcgacaatat
    32461 cgtttttctt taacataatt ctactttcta tttttggacc actaaaaaag tgaccgaagt
    32521 cacttctagt ataccatatt tcttaacgca ggcctaactc agccaagcgc tgctggtatt
    32581 tttcaaaatc aacacgaaga gccataccac catacatatc atagtcgtca atccagtctc
    32641 cattttctgg gattgtaaca cgttcgatac catttgccgc atccaataga aggcctggtc
    32701 cctgtagcca cataaagctt tgtggcactg ttgtcggagt catcgccaca accttaccta
    32761 tagcttcgga gccagagaat agtttcattg gatttttagc ctgtgtcata acagcagata
    32821 acacttcctg ttgacgtctc gtacgaccaa aatcaccctc atcatccgaa cgatagcgcg
    32881 cgtagttaag caaggtctta ccatccatct gctgtacacc gacctgaatc gtttgataag
    32941 caggagcatt ttcttccagc tgtaaatcat tcggcacttc tactgagcta acgacttcac
    33001 cattaatagt tgaaaactgt gcatcaatcg ttacgccctc agggaaaagt gtatcaatcg
    33061 ttgtcgcaaa ggttgcaaaa tccaccatcg catagtactt gacatcgatg tcaaaattat
    33121 tcttcaacgc cttccgaact tcttcagccc cttgctgatt atcctgttct cccaaagtat
    33181 aggcagtatt gagtttatat tcatatccct caatatccac caaggtatcc cgcataaagc
    33241 taacaagttt gattttgtta tccgtgttat tcacatttag aaccatgatg gtatccgttc
    33301 gagtttcacc tgaactttcg ccaacacgac cgtctgttcc caaaattaaa atatttgtcc
    33361 cattcgatgt atctacgccg ttgaagacct cagctactgg cttctcactc acgctattca
    33421 tacctttgaa aaaactatag cccatcgcta caattactag cgctatagca agcaatacga
    33481 aaccaataaa gcgcttgaaa ccaccctttt tacgagcttt tttaggttta ggtactttcg
    33541 ctttgggctc gatacgagga gactgaaacc gttgaggttt ggcttgtctt gtttttctgg
    33601 atctacgttc aggatagcga ggcaacagtt cctcttgctc atcatcctct tcaaaataat
    33661 cttcctcgaa gtcatcttcg taagccgttg gtgtgaagct acgtagagat tgccttggac
    33721 ttccatgccg ttctctcagc tcttttttat ataatagata atccaactca cgactttctt
    33781 tgtcatttaa gtagtggata tttttttgca aataatctaa cctcaattgt tcatgatggg
    33841 ttaggatatt attgttttta ttcatctgtc ttcatcctag ctggtcatat agaccaggta
    33901 attccctagt actttatagg ttatatctaa actagtcaat tctttttgag aataggctaa
    33961 taattcctca gactgattgt caagatccag tatgaaaaaa tactcaccca aagccgtttt
    34021 caggggtcgg ctttctattt ttgttaagct gattcctctc catgagaaaa cagacatggc
    34081 cttatacaag gctcctggca ggttatctgg caatgtaagt gcaagactga cttttttagc
    34141 tacttgttcc agggcaatag acggagcctt atcccccaaa atccaaaagc gtgtaaaatt
    34201 ctcgctgatt tcctggatgt cttgcgcaat tacttccagt ccatattcaa ctgctgccgc
    34261 ttgcggagca attgccgcga atggttgttc agggtgttct gccacaaagc gagcagcata
    34321 ggctgtactg gctgttattt caatacgagc ctgaggaaaa tgttcctgaa tatatttctt
    34381 cccctgagca attgcctgcg gatgagaata gataacctct acagccttat cggcactcgt
    34441 ggctaacagt tgttgggcaa tcagttgaac aatctctgca accgcatgaa tctccgcctg
    34501 atgaaagaga tagtcaatcg tttcatgaac actaccttca atcgagttct ctactggaat
    34561 aacggaatag gtaacttccc ccgtttcgta ggccttaata acctctgtaa tcgtttcaaa
    34621 agcctgcaaa tccgcagtcg gaaaggcctg ctgggccact tgatgtgtaa aagaaccacg
    34681 aggtcctaga taggctactt gcataaaatt ttccttgcta cttgttctgg attcagttta
    34741 tctgtatcaa ttacagtatc agctaaacct tgataaagtg ccattcgctc acgatagagg
    34801 gcttcaaact cttccttact gtactgtaaa aagagaggtc tttgcgactg tctatcctta
    34861 ctaattctct gataggaaac ttcaaaggag gcagtaagaa gtacattgtt ctccctattt
    34921 gccaacagca actccctgtt tacttcagat ttaatcacac caccaccagt tgacacgata
    34981 caattactag gtaagtccag caattctttc agtacctctg tctccagttg tctaaacgaa
    35041 gcctctcctt caagactgaa atagtcagca ataggcatac caatccgttc ttcaatgata
    35101 tggtccatat cgtaaacggg gagatttaac aaatgtgctg ttgttgtttt tccaactccc
    35161 ataaatccaa gtaaaacgat tggcatacgt tctcctaatc catcaaacta tttaagtgtt
    35221 caaagaaggc aggatagcta gtattgatag cttctgctct ttccaataca acttctccat
    35281 ctttggccaa caaggcggca atggcagtca tcataccgat acggtggtca ccaaatgtat
    35341 tgatttcagc accatgtaaa gcagttggtc cgtgaataat cataccatct tctgttggtt
    35401 caatagttgc tcccatacta tttagagcat ctgcaacaac ctgaatacga tccgtttctt
    35461 tgactttcaa ctcctcggca tcacgaataa tcgttgttcc atgtgcttga gtcgctagta
    35521 aggtaataat tggcaactca tcaatcaaac gaggaatcaa ttcgcctgca atctccgtag
    35581 ccttcaattc cgacgtttca actgtaatgg tagcagattt tgcaagttca tctatattag
    35641 aaagggtcat ttttccgccc atagctttaa tgacatctag aataccagtc cgagtttcat
    35701 tgattcctac attttcaagg acaatttttg aacctggtac gattaagcca gcaaccaacc
    35761 aaaaggcagc acttgaaata tctcctggaa ctgtaatctc ttgggcaata aactcctgac
    35821 caccttggat gcggatttcc ttgccattga cttccaactg tccaccaaac tggacaatca
    35881 tatcttctgt atggtttcga gtcaactctt tttctacgat gaccgactct ccctcagcct
    35941 gcaaggcagc aaaaatcaga gctgatttta cttgggcaga ggctacaggg agttggtagc
    36001 gaattggttt taaattctta ttccctttga tggtcaacgg aggtaggtca cgttcagttt
    36061 gtccagaaat ctctactccc atttgactga gtggaatagt tactcggtcc atgggacgtt
    36121 tggacaagga atcatcacca aacatagtcg cctcaaagtc ttgacctgct aaaacgcctg
    36181 aaatcaaacg aatcgaggtt ccagaatttc ccatatccaa atcatttttg ggtgcttgaa
    36241 gaccatcaaa accaacaccg tggacttcaa caatatcacc attgtcttca atttttacac
    36301 ccaagtcacg aaagacctgc atggttgaca agacatcttc tccacgtaaa atatcgtgga
    36361 cacgggtaac accttttgca agggaaccaa aaataataga acgatgactg attgatttat
    36421 cacctgggac acgaatcaca ccctgtagtt tttctacgtt ttttcttaat ttcatatcct
    36481 tacctcaaac tagtattact tccattctat catattt
//
LOCUS       DBNFCX010000011        35702 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.011, whole genome shotgun sequence.
ACCESSION   DBNFCX010000011 DBNFCX010000000
VERSION     DBNFCX010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 35702)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35702)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35702
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.011"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(112..450)
                     /locus_tag="AC1PJC_000445"
     CDS             complement(112..450)
                     /locus_tag="AC1PJC_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002264292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP cone domain-containing protein"
                     /protein_id="HIP6619473.1"
                     /translation="MQVIKRSGEIVEFDPDKIYQAIIKAAQTVYVIDETWRKNLAQVT
                     KKVVLDLEEAHTERPTISMVQSQVEHRLLDAGYISIAEHYISYRLQRDLERNGYGDKI
                     IVHLRFEQVR"
     gene            617..2407
                     /gene="pepF"
                     /locus_tag="AC1PJC_000446"
     CDS             617..2407
                     /gene="pepF"
                     /locus_tag="AC1PJC_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligoendopeptidase F"
                     /protein_id="HIP6619474.1"
                     /translation="MTNAMPKRQEIDVQLTWDTDILFPTPDNYKENLAAYAKQVTAFE
                     SNYKGKLTDKDTIVSALTEYEKIVILDSRLSHYAFLPLEVDKMNTELASLANEYDLVS
                     AKARPQRDFLYSELGQLDEAFLLELKEEQPQWAAFFDAILRDKPHQLHPLQEELLSNF
                     APTFGQPYNNYGVTKFEDMTFDNFEANGETLGNSYVLFENDYELSHDTEIRRNSAAGF
                     YSTLKKYKNTTAATYLSHIKNEQIEARLRGFDNTIDFLLHSQNVSRDLFDRQIDVIMK
                     ELAPHMRRYVKLVAKAHGLDKITHADLKISLPSEYNQRITPEESKQFLIDCLGILGED
                     YVKMIEQSFDERWIDFAQNEGKATGGFCATLYDGPSYILLSWTGLMNEVLVLAHELGH
                     AGHFQLAKKQSVLSYDPSLYFIEAPSTANEVLTCNTLLKNNQDPGFQAYLISELISRT
                     YFHNMVTHLLEAAFQREVYTRLDNEEYLNGDILCQIKLDVIKEFWGEDFEIGDDAGLI
                     WMRQPHYYIGLYPYTYSAGLTIGTAMAKQLEEKPEEVVEKWLETLSLGASLSAQDLAK
                     HAGVDVSTDQPLKETIAYVGSLVDKLETLI"
     gene            complement(2436..3038)
                     /locus_tag="AC1PJC_000447"
     CDS             complement(2436..3038)
                     /locus_tag="AC1PJC_000447"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HIP6619475.1"
                     /translation="MDYRFVKGTSPRLLVFFHGTGGNKESMLFLRQQLDPEAFVLSLD
                     GSWGQGRERRFFAPLIDGQLDLVDFERRLSAFLDFWQDLDIQPYQQVTFVGFSNGANF
                     IMGLLTKQADLADDYLLLHPSALDYAFPMENSRAEVLFTLGQNDQLVDQVALEHLVDD
                     WQASVFPRTNLARFDKGHFLSQDELTYIKNWYQERIDKKT"
     gene            complement(3051..4001)
                     /locus_tag="AC1PJC_000448"
     CDS             complement(3051..4001)
                     /locus_tag="AC1PJC_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HIP6619476.1"
                     /translation="MNNTGIHHISSLVGNIHQAYHFYHHILGLKLTLKTVNQEDSSMY
                     HLFFGDEEGRFGTEFTIFDMPNHPSHRSGSNRLERTVFLVKDFAALEFWQKRLTEFEV
                     ENEGIQAFGNGHILNFQDEDGQLLGLTYHESVGEMFPYKTDEIPSEYAILGIASLHMR
                     IREEKELLSLLTETFGFVEEDRFVFEDKIVISLFFDNTFQHCLYLILDQESPISVMGV
                     GAIHHIAFGVLDESDLEDLISRLNLINRPHSGIINRDFMYSLYFRAPNYLMFEVAIMA
                     GEREATMPRQDKLLDKVELFLPSFFEEDRQEIEKNLSQRY"
     gene            complement(4133..4840)
                     /locus_tag="AC1PJC_000449"
     CDS             complement(4133..4840)
                     /locus_tag="AC1PJC_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MIP/aquaporin family protein"
                     /protein_id="HIP6619477.1"
                     /translation="MTNELIGEVLGTALLILLGNGVVAGVVLDKSKAKDAGWIVITIG
                     WGLAVAMAAFVSGLLGPAHLNPAVSIAMAFAGNLPWASVVPYILAQFIGAFIGSILVY
                     LMYKDHYDATEDTGAVLATFSTGPAIRNLVSNTISEAIGTFVLVLGLLAFGQYDFPTG
                     LGTLIVGGLIVSLGVSLGGPTGYALNPARDLGPRIMHTILPLKHKGDSDWGYAWVPVV
                     GPIIGGLLAAVLYGLIF"
     gene            complement(4854..6683)
                     /gene="glpO"
                     /locus_tag="AC1PJC_000450"
     CDS             complement(4854..6683)
                     /gene="glpO"
                     /locus_tag="AC1PJC_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004368 - glycerol-3-phosphate
                     dehydrogenase (quinone) activity [Evidence IEA];
                     GO_process: GO:0006072 - glycerol-3-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glycerol-3-phosphate oxidase"
                     /protein_id="HIP6619478.1"
                     /translation="MEFSKETRRLAIERMQDRQLDLLIIGGGITGAGVALQAAASGME
                     TALIEMQDFAEGTSSRSTKLVHGGLRYLKQFDVEVVSDTVSERAVVQNIAPHIPKPDP
                     MLLPVYDEPGSTFSLFRLKVAMDLYDLLAGVNNTDMANKVLTKEEVLEREPNLKQEGL
                     IGGGVYLDFRNNDARLVIENIKRAAKDGALIASRVKAEKFIKDEAGKVIGIVARDLLT
                     DRTFEIRARLVINTTGPWSDEVRNLGGEGSGVLQMRPTKGVHLVVDSSRLSVPQPTYF
                     DTGHADGRMVFVLPRENKTYFGTTDTDYTGDLANPMVTQEDVDYLLDIVNNRFPEANL
                     TLDDIESGWAGLRPLLSGNGASDYNGGNNGKLSDDSFNGLIETVKGYLNNEKTRDDVE
                     HDLTHLEGSVSEKHLDPSAVSRGSALDRDDNGLLTLAGGKITDFRKMAEGAIEKVADI
                     LNEEHGRSFKLINSKTYPVSGGELNPANVAEEIEHLAQLGVKKGLVYDDALYLANLYG
                     SNAPKVFALNHKVEAVSGLNKRDLLSLHYAMKEEMTLTAVDYLLRRTNYMLFMREQLD
                     AVAPDVLKEMAAYYAWSEEEVAQQEQLLADTLVKNDLTYLKEK"
     gene            complement(6761..8272)
                     /gene="glpK"
                     /locus_tag="AC1PJC_000451"
     CDS             complement(6761..8272)
                     /gene="glpK"
                     /locus_tag="AC1PJC_000451"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003105149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004370 - glycerol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006072 - glycerol-3-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HIP6619479.1"
                     /translation="MSTEKYIMAIDQGTTSSRAIIFNKKGEKVGSYQKEFTQIFPKPG
                     WVEHNANEIWNSVQSVIAGSFIESGVRPDQIEGIGITNQRETTVVWDKETGLPIYNAV
                     VWQSRQTAHIADQLKADGHADMIHQKTGLVVDAYFSATKVRWILDQVPGAQERAEKGE
                     ILFGTIDTWLVWKLTDGKCHVTDYSNAARTMLYNIEELKWDDEILSLLNIPKAMLPEV
                     RSNSEVYGTTAPFHFYGAEVPISGMAGDQQAALFGQLAFEPGMVKNTYGTGSFIVMNT
                     GEEMQLSQNNLLTTIGYGIGGKVYYALEGSIFIAGSAVQWLRDSMRMVTTSPESEELA
                     RKSTSNDEVYVVPAFTGLGAPYWNSDARGSVFGLTRGTTKEDFVKATLQSIAYQVRDV
                     IDTMQLDTGIDISVLKVDGGAAMNSLLMQFQADILGIEIARAQNLETTALGAAFLAGL
                     AVGFWKDLDELKELNAVGQSFQPTMNDARKEQLYKGWKKAVAATQLFAEVEED"
     gene            complement(8502..9965)
                     /locus_tag="AC1PJC_000452"
     CDS             complement(8502..9965)
                     /locus_tag="AC1PJC_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIP6619480.1"
                     /translation="MRIDSLLEKRERAIYQLLLYLEDRREAPSLKDICHYLELSKSTL
                     LRYIVSFNEEAEVTDLGLSFQLEDEKVFLKKKASLSLHRILAYLCQTSTKYQIIVYLS
                     DKEEVSIQQLAQELLISEATLNRHLASLNQILAEFGIGIKSGRLKGSELQIRYFLHQM
                     LSLTTTRAELQEEFMLGKIEALLPVFERFYQSPLNPKQAHRLLLWLMISQQRSRLRQL
                     DFKHLYKLMDPYQEHKFYRRLRKMYFTLSQQQSTSFQEGEIMALFAFLFSYFILAPHQ
                     LEQVLGFGGPIMEATSLALQKLRLYFEENLPVSEEALYHLNQIMSQLYFFYSSVELEE
                     VEASSFYPEAEDLLKDVYKSVFHRKVDKEIRNSYLTNIADLYIYFSQVQPIQVKVAFA
                     SSLHEVLSYPLLLQLREKLEGNRQVLIEPYQAGYDYDLIITDYLENTSIPVYCLGNRL
                     KIQDIVQLKAWIQDIYHQKSCQSEIMATKTSFPIEHR"
     gene            complement(9955..11307)
                     /locus_tag="AC1PJC_000453"
     CDS             complement(9955..11307)
                     /locus_tag="AC1PJC_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HIP6619481.1"
                     /translation="MNIVIIGASFAGLSAALECRKLYQNAQITLIDREKDVAYFPNIL
                     NWKVAEKISGWEEAKISLFSEVQHAAISCLFETECLAVYPEMRKVKIRHHQDIGDIIY
                     DRLILAMGASQTWEWGTEELQDYLIRSKTLSQAQASLEKLTNAKTVAVIGAGQIGLES
                     LDALSQLDLNLHVFEAQDSLLAKYVDEDMIVPIRQEMEKRGIQLHLSETVNQITIDTQ
                     EEQLVCHTVTGNYPADLVLPSTNLTPNIQPVKDRLKVTAEGTVWVDEFLETSQENIFA
                     VGDLVSLPVDYFGQSYLPMIHHAIMTGRMAARNLQKRIAPIKRVQRIVSSHVFGYYIT
                     SLGLTESEASLWLESKSIRIRRSYSQWEPTLVDFKLIVEETSGRILGGQLVSTADYIE
                     QMDVLSLAISKDLTVFDLVEHSWLCLPGNTPLVPFIVEAAQEYIRQFYQADGEGVYAD
                     "
     gene            complement(11570..12505)
                     /gene="dapA"
                     /locus_tag="AC1PJC_000454"
     CDS             complement(11570..12505)
                     /gene="dapA"
                     /locus_tag="AC1PJC_000454"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HIP6619482.1"
                     /translation="MSIQDLRDVKIITAMITPFKEDGSINFEVLPELIEHLLSHHTEG
                     ILLAGTTAESPTLTHEEELELFGAVQKIVNGRVPLIAGIGTNDTRDSIEFAKEVAAFG
                     GFAAGLAIVPYYNKPSQEGMYQHFKAIADASDLPIIIYNIPGRVVVEMTPETMLRLAE
                     HPNIIGVKECTSLANMAYLIEHKPEDFLIYTGEDGDAFHAMNLGADGVISVASHTNGD
                     EMYEMFTAIEQQDIRTAAAIQRKFIPKVNALFSYPSPAPVKAVLNYLGFEVGPLRLPL
                     VPCPEKDAKRIIKVVVDGDYEATKATVTGVVRPDY"
     gene            complement(12578..13654)
                     /locus_tag="AC1PJC_000455"
     CDS             complement(12578..13654)
                     /locus_tag="AC1PJC_000455"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000542485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HIP6619483.1"
                     /translation="MAYVVAVVGATGAVGAQMIKMLEESTLPIEKVRFLASARSAGKT
                     LQFKGQDIVIEETTETAFEGVDIALFSAGGSTSAKYAPYAVKAGAVVVDNTSYFRQNP
                     DVPLVVPEVNAHALDAHNGIIACPNCSTIQMMVALEPVRQKWGLERIIVSTYQAVSGA
                     GMGAILETQAQLRSVLNDGVEPKAVEANILPSGGDKKHYPIGFNAIPQIDLFTENDYT
                     YEEMKMTKETKKIMEDDSIAVSATCVRIPVLSAHSESVYIETKEIAPIDEVKAAIASF
                     PGAVLEDDVANQIYPQAINAVGSRDTFVGRIRKDLDKENGIHMWVVSDNLLKGAAWNS
                     VQIAETLHERGLVRPTAELKFELK"
     gene            complement(13823..14917)
                     /locus_tag="AC1PJC_000456"
     CDS             complement(13823..14917)
                     /locus_tag="AC1PJC_000456"
                     /EC_number="1.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008888 - glycerol dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol dehydrogenase"
                     /protein_id="HIP6619484.1"
                     /translation="MKVFASPSRYIQGKHVLFQGAEAIGKLGTKPLILCDDLVYGIVG
                     EKFLSYLVEEGMQVHRVAFNGEASDKEIQRVVEIGKEQASDVVIGLGGGKTIDSAKAI
                     ADLLGVPVVIAPTIASTDAPTSALSVIYSEEGAFERYIFYKKNPDLVLVDTAIICQAP
                     PRLLASGIADGLATWVEARAILQSNGTTMAGGGQTLAGIAIAQTCEQTLFEYGLQAMA
                     SCEAKVVTAALENIVEANTLLSGLGFESAGLAAAHAIHNGFTALEGDIHHLTHGEKVA
                     YGTLTQLFLENRPKEELEKYIRFYQALNLPTTLEELHLADASYEDLLKVGQQATIEGE
                     TIHGMPFVISAEDVAEALMAVDYYVRSLDK"
     gene            complement(15038..15994)
                     /locus_tag="AC1PJC_000457"
     CDS             complement(15038..15994)
                     /locus_tag="AC1PJC_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HIP6619485.1"
                     /translation="MKQFSGLSRTIQGNHLLDTCAIDILKIGHRPLVLCAKQEYNTTV
                     ESFVKILTCHGLIVKIAYMEEWDQNSVEEYGEVGFRHRADHIIGIGNSSVAACTKAVA
                     DLLDLPAVLIPISPFTTLPWVSVENKKRERPLFNESIQLIIADREQLLTQPTSELING
                     VVNTLLYLAAIKEVKRNHLFSLVDDILIRDFESVLLRGSLQAIENFEARILSKEVQDV
                     LEVLSTCVTLDLPSDAWDVIQQIESKLSERREDLVDEPLKRNVVLYLLLTYLTQESEE
                     FQARLKWSQQLLLSANSSNLLSLEAVFKEIALEIGEDCLTRC"
     gene            complement(16026..16694)
                     /locus_tag="AC1PJC_000458"
     CDS             complement(16026..16694)
                     /locus_tag="AC1PJC_000458"
                     /EC_number="4.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HIP6619486.1"
                     /translation="MEFMLDTLNIEEIRKWAEVLPLAGVTSNPTIAKKEGDIDFFERL
                     HLIRDIIGPNASLHVQVVAKDYEGILADAKKIRELAPENVYIKVPVTPAGLAAMKTLK
                     AQGYQITATAIYTVFQGLLAIEAGADYLAPYYNRMANLNIDSNAVIAQLSEAIDRECS
                     ESKILAASFKNVDQVNQAFANGAQAITAGADVFEAAFSMPSIEKAVNDFADDWSAIHG
                     RYTI"
     gene            complement(16709..19153)
                     /locus_tag="AC1PJC_000459"
     CDS             complement(16709..19153)
                     /locus_tag="AC1PJC_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycyl radical protein"
                     /protein_id="HIP6619487.1"
                     /translation="MKTVTEVAGTSIKTEYFGSLTDRMNKYREDVLDKKPYIDAERAV
                     LATKAYQEHREKPNVLKRAYMLKEILENMTLYIEEESLIAGNQASSNKDAPIFPEYTL
                     EFVLNELDLFEKRDGDVFYITEETKEQLRSIAPFWEKNNLRSRAGVLLPEEVQVYMET
                     GFFGMEGKMNSGDAHLAVNYQKVLEQGLRGFEERVRAAKANLDLTDPASIDKYHFYDS
                     IFIIIDAVKAYADRFVALATELAEKAPTAQRRQELLEIARICAKVPYEPAETFAEAVQ
                     SVWFIQCILQIESNGHSLSYGRFDQYMYPYVKADLEAGRETEDSIVERLTNLWIKTIT
                     INKVRSQSHTFSSAGSPLYQNVTIGGQTRDKKDAVNPLSYLVLKSVAQTHLPQPNLTV
                     RYHAGLDARFMNECIEVMKLGFGMPAFNNDEIIIPSFIEKGVLEEDAYDYSAIGCVET
                     AVPGKWGYRCTGMSYMNFPKVLLITMNDGIDPASGKRFAPAFGHFKDMKSFEELETAW
                     EKTLRHLTRMSVIVENAIDIALEREVPDILCSALTDDCIGRGKHLKEGGAIYDYISGL
                     QVGIANLSDSLAAIKKLVFEEGRLTPEELWHALETDYAGERGKEIQEMLIEDAPKYGN
                     DNDYADQLVTAAYDIYIDEIAKYPNTRFGRGPIGGIRYSGTSSISANVGQGRGTLATP
                     DGRNAGTPLAEGCSPSHNMDKNGPTSVLKSVAKLPTHEIVGGVLLNQKVNPQTLAKEE
                     DKQKLIALLRTFFNRLHGYHIQYNVVSRETLIDAQLHPEKHRDLIVRVAGYSAFFNVL
                     SRATQDDIIGRTEHTL"
     gene            complement(19305..20606)
                     /locus_tag="AC1PJC_000460"
     CDS             complement(19305..20606)
                     /locus_tag="AC1PJC_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HIP6619488.1"
                     /translation="MSKIDTQKIIVPIMKFVNMKGIIALKDGMLAILPLTVVGSIFLI
                     LGQLPFEGLNAAIASIFGAEWTEPFMQVYSGTFAIMGLISCFAIGYSYAKNSGVEPLP
                     AGVLSLSSFFILLKSSYIPVDGEPIGDAIAKVWFGGQGIIGAIIIGLVVGAIYTTFIQ
                     RHIVIKMPEQVPQAIAKQFEAMIPAFVIFLLSMIVYIVSKMATNGGTFIEMIYDVIQV
                     PLQGLTGSLPGAIGIAFFISFLWWFGVHGQSVVNGVVTALLLSNLDANKALLAADKLS
                     LENGAHIVTQQFLDSFLIMSGSGITFGIVFAMLFAAKSKQYKALGKVAAFPALFNVNE
                     PVVFGFPIVMNPVMFLPFVLVPILAAFIVYGAISIGFMQPFSGVTLPWSTPAIISGFM
                     VGGWQGAVVQIIILAVSTIVYFPFFKIQDKIAYESEMKEPV"
     gene            complement(20619..20924)
                     /locus_tag="AC1PJC_000461"
     CDS             complement(20619..20924)
                     /locus_tag="AC1PJC_000461"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HIP6619489.1"
                     /translation="MVKIALFCAAGFSTGMLVNNMKIAAADAGVEVEIDAHSQGKIAD
                     YLDEIDVVLLGPQVAYTLDKSKALCDEKQVPIAVIPMADYGMLDGKKVLQLALSMVS"
     gene            complement(20957..21280)
                     /locus_tag="AC1PJC_000462"
     CDS             complement(20957..21280)
                     /locus_tag="AC1PJC_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HIP6619490.1"
                     /translation="MEMIVADQLIMGLIIYAGDAKSHAYQALSLVKAGEEERAEEELE
                     LADAALLEAHNMQTKFLAQEAGGAKSDITALFVHSQDHLMTSITEINLIKEIIDLRKE
                     LKKVG"
     gene            complement(21470..22444)
                     /locus_tag="AC1PJC_000463"
     CDS             complement(21470..22444)
                     /locus_tag="AC1PJC_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding transcriptional regulator"
                     /protein_id="HIP6619491.1"
                     /translation="MKQEKRRQLAKIAYLYYEEGKSQAEIAAETGIYRTTVSRMLTKA
                     KSEGIVKIEIQDFDRRLYRLEKYVQEKYGLKGLELVENSTDEDQLDLENRLAQAAADM
                     LTNLIDDGKKVGFSWGRSLSLIVDKIGNHRMKGVKFVPIAGGPSHIHARYHVNTLIYD
                     MANKFRGECSFINATIIQENQELAQGILSSKYFEELRADWKDLDVAAIGIGGRVDEKN
                     RQWLDMLTTADFQALSDEGAVGETCCRGLNQYGQAIVEDLQKRTIAISLDDLKEVPDT
                     IALAYGEEKAQAILAVLRAGYIHHLVTDERTIVKVLELDNDVHVHTNL"
     gene            complement(22457..23200)
                     /locus_tag="AC1PJC_000464"
     CDS             complement(22457..23200)
                     /locus_tag="AC1PJC_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family DNA-binding transcription
                     regulator"
                     /protein_id="HIP6619492.1"
                     /translation="MERLDKIIQLVSQHEKIDVNSLAEQLDVSKVTIRKDLDKLESKG
                     LLRREHGYAVLNSGDDLNIRMSFRYDVKKRIAKEATNLIADNETIMIESGSTCALLAE
                     EICKTKRNVTIITNSYFIANYVRQYDSCQIILLGGEFQKDSQVTVGPLLHKMIQFFHV
                     DKAFVGTDGYDSEHGFTGKNLMRSEVVQYMSDVAENMIVLTDSSKFTKRGTVRRFGLS
                     QVAQVITDTSISEDLVKELENARVTVRLV"
     gene            23332..24108
                     /locus_tag="AC1PJC_000465"
     CDS             23332..24108
                     /locus_tag="AC1PJC_000465"
                     /EC_number="1.97.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019321467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0043687 - post-translational protein
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycyl-radical enzyme activating protein"
                     /protein_id="HIP6619493.1"
                     /translation="MNTRKGIIFNIQHFSLHDGPGIRTTVFLKGCPLRCPWCANPESQ
                     KRKPEPMLDAVSKKMTIMGEEKSVDDIISEVMKDIDFYEESGGGLTLSGGEIFAQYEF
                     AKAILMEAKRHGLHTAIETTAFVEHHKFVDLIQYVDFIYTDLKHYNTISHRKVTGVNN
                     NLIIQNIQYAFSIGKEIVLRIPVIPDFNNSLEDAEQFACLFNQLKIDKVQLLPFHQFG
                     ENKYKLLNRTYAMTDVKALHPEDLKDYQAIFIKHNINCYF"
     gene            complement(24403..24691)
                     /locus_tag="AC1PJC_000466"
                     /pseudo
     CDS             complement(24403..24691)
                     /locus_tag="AC1PJC_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646933.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1905 domain-containing protein"
     gene            complement(24700..25353)
                     /locus_tag="AC1PJC_000467"
     CDS             complement(24700..25353)
                     /locus_tag="AC1PJC_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009754918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA alkylation repair protein"
                     /protein_id="HIP6619494.1"
                     /translation="MKIDELEKRLLAVADASQAQPMKAYMKNNFDFLGVRTPNRRKVA
                     RQFFKEFKSQGIDWEFVAACWSKPYREFQYIAIDYLVTKKKDLVLTDLPRLKKLAQTK
                     SWWDSIDGLDKLVGKIVLENPEAKQTILEWSVDDDFWLRRIAIDHQLLQKEKTDTELL
                     EKILVNNLNQTEFFINKAIGWSLRDYSKTNPEWVRVFLTKYSSQMAGLSIREASKYI"
     gene            complement(25343..25852)
                     /locus_tag="AC1PJC_000468"
     CDS             complement(25343..25852)
                     /locus_tag="AC1PJC_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase family protein"
                     /protein_id="HIP6619495.1"
                     /translation="MIDIRSARREDAADLVAIYAPYVEKTAITFETEVPTVEAFASRI
                     EKILEKFPYLVAVEEGTLVGYAYASTYYARAAYDWTVELSVYIKQEARGKGIGTLLYN
                     ALEKELTARGFKNFLACIALPNPASIALHEKRGYEQVAHFKKVGYKFDTWHDIVWLQK
                     SLVGKQNED"
     gene            complement(25853..26470)
                     /locus_tag="AC1PJC_000469"
     CDS             complement(25853..26470)
                     /locus_tag="AC1PJC_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5052 family protein"
                     /protein_id="HIP6619496.1"
                     /translation="MKLQKKIMLSIVLGLSLVSLSSCQSIANWWKNTKEEWIGLEMTV
                     RTYDENSQLIDEMSGRSLSISRNQEFDSVDAEGYSNADSSVLKVTLGNYEIDHVGSSL
                     IAAEEGLEDLYAKYQTTVDIANYDRAIPLVNRMVSSLKNDFTGKAKVVLIRSQNGTPL
                     ATYVGDKVSLYASDAPKTSELLIDGKRLIIYRCDYTIYDRELLEN"
     gene            26655..27470
                     /locus_tag="AC1PJC_000470"
     CDS             26655..27470
                     /locus_tag="AC1PJC_000470"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PrsW family glutamic-type intramembrane
                     protease"
                     /protein_id="HIP6619497.1"
                     /translation="MKLLIFLAVWSFFSGCKVLLTFFGKADGMDGKYPLFFLTISLVA
                     LYVFPMILIIRYIAKRFDISKKVIHLSWILGITASFYFSGLGQTLLGAFWLFIVKPPQ
                     TFIQNWGAAVTAPFHEEFGKGLVVLLVLLLLKKLTLKNAVVSGMIVGLSFQIIEDGLY
                     VFQQIFKSKADGFATLIERMLHAGGTHWAFSLAFAVGLVALVSKNSGMSKKQGLFWML
                     MAVLAHFFLNTPFNEGLTSNSGEITVLMLCFSFCVALAAFFKVDQIETNQHHQ"
     gene            complement(27641..28957)
                     /locus_tag="AC1PJC_000471"
     CDS             complement(27641..28957)
                     /locus_tag="AC1PJC_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016668 - oxidoreductase activity, acting
                     on a sulfur group of donors, NAD(P) as acceptor [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-containing oxidoreductase"
                     /protein_id="HIP6619498.1"
                     /translation="MEQYDLVVIGFGKAGKTLAGKLSAAGKKVALVEENPAMFGGTCI
                     NIGCIPTKTLLVAADKNWTFEQVMDQKETVITRLRNKNEAVLKGSGANLYQGHARFVA
                     DKVVEVSAGEESIQLTAETIVINTGAKSRVLPIPGLLDTAHVYDSTGIQNLETRPNKL
                     AIIGGGNIGLEFAGLYNKLGSQVTVYEASSAILPREEEVVAKLAKEYMEEAGVTFVLG
                     AKIEQVAAAGEQVAVTVNGETAIFDAVLYATGRVPNTADLGLENTAIELLENGAVKVD
                     DYCETTVPGVYAVGDVNGGPQFTYTSLDDFRIVFGKLTGTGTYSLSQRKSIPTSVFIT
                     PVLSRVGLTEKEAKAAGYDYIANELPVANMPRAHVNNDLKGIFKVIVDKESKLVLGAT
                     LFGRNSEELINLIAMAIDNKIPYTYFKTQIFTHPTMAENLNDVFNF"
     gene            29174..29983
                     /locus_tag="AC1PJC_000472"
     CDS             29174..29983
                     /locus_tag="AC1PJC_000472"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018381403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PrsW family glutamic-type intramembrane
                     protease"
                     /protein_id="HIP6619499.1"
                     /translation="MKEKFQMCKTYLPVVLATIGFVNGCKIIFGELGKPNGMEAKYPL
                     FLLTISLVAIYLIPLLVLTYSLAKRYNISKQVIGLSWLLGLTSSISFSELGHTAIGYF
                     LLEIVKASNNFLNDWGAAISGPLAEEIGKGLTVLLVLLICRKMTLKNALVSGVIVGLG
                     FQIMEDITFVFRDMFMNKLDGFETILERVGQAGWAHWVFTLLFAIGLVALLTKNTGMS
                     KAQGVFWIGASFGIHFLFNSPFNTGIFQTVFPILSILLGLLAYQTVEKLSE"
     gene            complement(30023..31693)
                     /locus_tag="AC1PJC_000473"
     CDS             complement(30023..31693)
                     /locus_tag="AC1PJC_000473"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019803354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004329 - formate-tetrahydrofolate ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HIP6619500.1"
                     /translation="MKTDIEIAQSVTLKPITEIVEKVGISFDDIELYGKYKAKLSFDK
                     INAVKENAPGKLILVTAINPTPAGEGKSTITIGLADALSKIGKKTMIALREPSLGPVM
                     GIKGGAAGGGYAQVLPMEDINLHFTGDMHAITTANNALSALIDNHIHQGNVIGIDQRR
                     IIWKRVVDLNDRALRKVTVGLGGPLNGIPREDGFDITVASEIMAILCLATDINDLKER
                     LANIVIGYRFDRSPVYVRDLAVEGALTLILKDAIKPNLVQTIYGTPAFVHGGPFANIA
                     HGCNSVLATTTALRLADYTVTEAGFGADLGAEKFLDIKVPNLPKAPDAVVIVATLRAL
                     KMHGGVAKTELSTENVEAVKAGFSNLKRHVENIQKYGIPAVVAINEFVSDTADEIAAL
                     KELCAEIGVPVELASVWANGADGGVELAETVVATIDNQAANYQRLYKAEDSLEEKVTK
                     IVTQIYGGSGVVFEKKARNQLAEFAKNGWDKLPVCMAKTQYSFSDNQFALGAPTDFDI
                     TVREFVPKLGAGFIVALTGDVMTMPGLPKAPAALNMDVAADGTAVGLF"
     gene            31993..32688
                     /locus_tag="AC1PJC_000474"
     CDS             31993..32688
                     /locus_tag="AC1PJC_000474"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantothenate--cysteine ligase"
                     /protein_id="HIP6619501.1"
                     /translation="MKLLITSGGTSEAIDQVRAITNHASGNLGKIIAEQALKRGHEVT
                     LVTTRQAVKPNSQKNLTIIEITNVDSLKETLEPLVKTHQALIHSMAVSDYTPVYMTGL
                     DELRATEDISSLLKKQNTESKISSKDDYQVLFLKKTPKVISYVKTWNPAITLFGFKLL
                     VNVPKEELFAVARQSIERNGADYILANDLKDIGENQHIAYLVDKTREIQAQTKDEIAQ
                     LILNTLEKGEQNG"
     gene            32681..33229
                     /gene="coaC"
                     /locus_tag="AC1PJC_000475"
     CDS             32681..33229
                     /gene="coaC"
                     /locus_tag="AC1PJC_000475"
                     /EC_number="4.1.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantothenoylcysteine decarboxylase"
                     /protein_id="HIP6619502.1"
                     /translation="MANITLAVTGSISAYKAADLTSQLTKLGHQVTVLMSRSAMDFIT
                     PLTLQSLSKNLVHTDVMIEENPALIKHIDIAKETDVFLVAPASANTIAKLANGMADNI
                     ITATALALPIGTKKLLAPAMNTNMYLNPATQKNIKTLMEYGFEEIKPREALLACGDFG
                     TGALAEIDVILNKVMEVLNENK"
     gene            33216..33785
                     /locus_tag="AC1PJC_000476"
     CDS             33216..33785
                     /locus_tag="AC1PJC_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HIP6619503.1"
                     /translation="MKTNKSRDVATLAIFLTIMIVIEVVSQMIFANFILPIKPTITHI
                     PIIIASILYGPRLGAQLGGFMGIMSIIRNSIIISPMSYVFSPFVEHGNFNSILIALVP
                     RILIGVTPYFVYKLMKNKKGLLLAGLTGTLTNTIFVLTGIFFLFSNVYAGDIKLLLAS
                     IVSFNSIAELTISGLLTIAIVPVLQKVQK"
     gene            33876..35594
                     /locus_tag="AC1PJC_000477"
     CDS             33876..35594
                     /locus_tag="AC1PJC_000477"
                     /EC_number="5.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016868 - intramolecular
                     phosphotransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-sugar mutase"
                     /protein_id="HIP6619504.1"
                     /translation="MTYQETYQTWLDFADLPDYLREELVAMDEKTKEDAFYTNLEFGT
                     AGMRGYIGAGTNRINVFVVRQATEGLAKLVESKGEEAKKRGVAIAYDSRHFSPEFAFE
                     SAQVLAAHGIKSYVFESLRPTPELSFAVRHYNAIAGIMVTASHNPKEFNGYKVYGEDG
                     GQMPPADADALTNFIRAIDNPFAVELADLEASKENGLITVLGEETDVKYLEELKDLNI
                     NPELIAEYGKDMKIVYTPLHGTGEMLARRALAQAGFESVQVVEAQATADPDFSTVASP
                     NPESQAAFALAEELGREVGADVLLATDPDADRVGVEVRQADGSYWNLSGNQIGAIIAK
                     YILEAHKQAGTLPANAALAKSIVSTELVTKIAESYGATMFNVLTGFKFIAEKIQEFEE
                     KHNHTYMFGFEESFGYLIKPFVRDKDAIQAVLMVAEIAAYYRSRGMTLADGIDEIFKE
                     YGYFAEKTISVTLSGKDGAEQIKAIMAKFRDNSPAQFNATDIAVFEDFALQTKTDKDG
                     NVEKLTTPPSDVLKYILADDSWFAVRPSGTEPKIKFYIATVGETLAEAEEKIANIEKE
                     INDFVG"
BASE COUNT        10471 a         8030 c         6672 g        10529 t
ORIGIN      
        1 aaaaatatgc tcagaatatc acattttttt caaaaagttt ttgaaatgct attttcttta
       61 aacaatgtaa agatatataa aagcaaaaac ctagatttct ctaggtttct cttaacgtac
      121 ttgttcaaaa cgcagatgta caataatctt atcgccatag ccgttacgtt ccaaatcacg
      181 ttgcaagcga taggaaatgt aatgctcagc aatagaaata taccctgcat ctaaaagacg
      241 gtgttcaact tgcgactgaa ccatgctaat cgttggtcgc tctgtatgag cttcttccaa
      301 gtcaagcact actttctttg tgacctgagc aagatttttc cgccaagttt catcaatgac
      361 atagactgtc tgtgcagctt taatgatggc ttggtagatt ttatctgggt caaattcaac
      421 aatctctcca ctacgtttaa tgacttgcat aaaagctcct ttctggtttt cagtaaaccc
      481 tttcatactt acattatcta ggtttttgtg tattttgtca agtattcttt ttcataaatt
      541 ttgccttggc ttattttcgc tgaaagccct ttagtatgat ataatggacc tattaaaatg
      601 aaataaggag aaaatcatga caaacgcaat gcctaaacgt caagaaattg atgtgcaatt
      661 aacctgggat acggacatcc tatttccgac ccctgacaac tacaaagaaa atttagcagc
      721 ctacgctaag caagtgacag ctttcgaatc gaattacaaa ggtaagctaa ctgataagga
      781 taccatcgtt tccgccttaa cagaatacga aaaaatcgtt attcttgata gcagactttc
      841 ccactatgcc ttccttcctt tggaagtcga taagatgaat actgaattgg cgagcctggc
      901 caacgaatac gacctcgttt ctgccaaggc acgtcctcaa cgagatttcc tctattcaga
      961 acttgggcaa ttagatgaag cctttcttct tgaattaaaa gaagaacaac cacaatgggc
     1021 tgcattcttt gatgctattc tccgtgacaa gccgcatcag cttcatccgc tacaagaaga
     1081 acttttatca aattttgccc caacttttgg tcagccatat aataattacg gtgtgaccaa
     1141 gtttgaagat atgacctttg ataacttcga ggcaaatggc gaaacgctcg gcaatagcta
     1201 tgtgctcttt gaaaatgatt acgagctcag ccatgatacc gaaatccgtc gcaattcagc
     1261 tgctggtttc tattcaacct tgaaaaaata caagaataca actgcagcaa cttatttgtc
     1321 tcatatcaag aatgagcaaa ttgaagctcg cttgcgtgga tttgacaata cgattgactt
     1381 cctcttacat agtcaaaatg tcagccgtga tctcttcgac cgtcagattg atgtcatcat
     1441 gaaagaattg gctcctcaca tgcgtcgcta tgtgaaattg gttgctaagg ctcatggttt
     1501 ggataaaatc actcatgctg acttgaaaat cagcttgcca tcagaataca accaacgcat
     1561 cacacctgaa gaatctaagc aattcttgat tgactgcttg ggcattcttg gtgaagatta
     1621 tgtgaaaatg attgaacaat catttgatga gcgttggatt gactttgctc aaaacgaagg
     1681 taaggctact ggtggcttct gtgctactct ttatgatgga ccatcttaca tcttactttc
     1741 atggacaggc ttgatgaacg aggtcttggt attggctcac gaattgggac atgctggtca
     1801 tttccaattg gctaagaaac aaagcgtcct cagctacgat ccatccctct acttcatcga
     1861 ggcgccttct actgcaaatg aagtcttgac gtgtaatacc ctcttgaaaa acaatcaaga
     1921 tcctggcttc caggcttact tgattagcga gttgatcagc cgtacatact tccacaacat
     1981 ggtcactcac ttgcttgaag cagccttcca acgtgaagtc tatactcgtt tggacaacga
     2041 agaatacctc aacggtgata ttctctgcca aatcaagttg gatgtcatca aggaattctg
     2101 gggtgaagac tttgaaatcg gtgacgatgc aggtcttatc tggatgcgtc aaccgcacta
     2161 ctacattggt ttgtatccat atacctactc agctggtttg accatcggta cggctatggc
     2221 gaaacaattg gaagaaaagc ctgaagaagt tgttgaaaaa tggttggaaa ccttgtcact
     2281 cggtgcaagt ctttctgccc aagaccttgc taagcacgca ggtgttgacg tttcaactga
     2341 ccaaccactt aaagaaacca tcgcctatgt tggttccttg gtggataaac tggaaacact
     2401 aatctaagac acataaaaga cttgaactta tttgttcagg tctttttgtc tattctttct
     2461 tgataccaat ttttgatata ggtcaattca tcctgactta aaaaatgtcc tttgtcaaaa
     2521 cgagctaggt tggttctggg aaaaactgac gcttgccagt catctacaag atgttcaaga
     2581 gcgacttggt cgacgagttg gtcattctgc cccaatgtaa ataaaacctc tgctctgcta
     2641 ttttccatag gaaatgcata atctaaagcc gatgggtgca gtaataggta atcatctgcc
     2701 aaatctgcct gcttggtcaa caagcccatg atgaagttgg caccgtttga gaatccaacg
     2761 aaggtaacct gctggtaggg ctgaatgtcc aagtcctgcc aaaaatccag aaaagccgac
     2821 aagcgccttt caaaatcgac aagatccagc tgaccatcaa ttagcggggc aaagaaacgc
     2881 ctttccctgc cttgacccca acttccatcc aaggaaagga caaaagcttc tggatccagc
     2941 tgttggcgga gaaagagcat ggactccttg ttgccacctg ttccgtggaa aaagaccaaa
     3001 agacggggac tggtcccttt gacaaagcga taatccatac ttcatttctc ctaataacgt
     3061 tgggagagat ttttttcgat ttcctgtctg tcctcttcaa aaaaacttgg caagaacagt
     3121 tcaactttat ctagcagctt atcttgtctt ggcatggtag cctctctttc gccagccatg
     3181 atcgcgacct caaacatgag atagttgggc gctcggaagt acagggaata catgaaatct
     3241 cgattgataa tgccagaatg tgggcgatta atgagattta atcggctaat caggtcttcc
     3301 aagtcagact catctaagac accaaatgcg atatgatgaa tggccccgac tcccatcacg
     3361 ctgattggcg actcttggtc aagtatcaaa tatagacaat gctggaaggt gttatcaaag
     3421 aaaagagaaa tcactatctt atcctcaaag acaaatcggt cttcctcgac aaaaccaaaa
     3481 gtctctgtca ataaagataa caactccttt tcttcacgta ttcgcatgtg aagactggca
     3541 atgccaagaa tagcgtattc tgacggaatt tcgtctgttt tatacggaaa catttctccg
     3601 actgattcat ggtaagttaa accgagtagc tgtccatctt catcttggaa attcagaata
     3661 tgcccatttc caaaagcctg aattccttcg ttttccactt caaactctgt cagtcttttc
     3721 tgccagaatt ccaaggcagc aaaatcttta accagaaaaa cggttcgttc caaacgattg
     3781 ctgccggatc gatgactagg atgattgggc atatcaaaaa tggtaaattc cgttccaaag
     3841 cggccctctt catcaccgaa aaagagatga tacatgcttg aatcttcttg attgacagtt
     3901 ttcaaggtca atttcaaacc gagaatatga tgataaaaat gataggcttg atgaatattt
     3961 cctaccaagc ttgaaatgtg atgaatacct gtattgttca taagatgacc tcactgatgt
     4021 tgatagactt attttatcgc taattattga taaataacaa tcttttgctc acgattgaca
     4081 gccaagtaat aaaaaacttc cctaatcatt gctaattaga gaaggatatt tcttaaaaaa
     4141 tgagaccata aaggacagcc gcaagcaagc ctccgatgat cggaccaact acaggtaccc
     4201 aagcatagcc ccaatctgaa tcgcccttgt gcttcaatgg aaggatggta tgcatgatac
     4261 gaggaccaag gtcacgcgca gggtttaggg catatcctgt tggaccacca agagaaactc
     4321 cgagtgatac aatcaaacca ccgacgatta aagtgccaag ccctgttgga aaatcatact
     4381 gaccaaaagc caataatccc aagactaaaa caaaggttcc aattgcttcg ctaattgtat
     4441 tggaaacaag gttgcggatg gcaggtccag tagagaaagt tgccaacaca gcaccagtgt
     4501 cttctgttgc atcgtagtga tctttgtaca tgaggtagac caagatactt ccgataaagg
     4561 ctccgataaa ttgagcaagg atgtaaggaa ctacagaagc ccatgggaga tttcctgcaa
     4621 aagccattgc aattgataca gctgggttga ggtgggctgg gcccaataaa ccactcacaa
     4681 aggctgccat ggctactgct agaccccaac caattgtgat tacaatccaa ccagcatcct
     4741 tggccttact cttatctagc actacccctg ctacaacacc gttaccaagt aatatcagca
     4801 aggcagtacc cagtacttca ccgattaatt catttgtcat catgcacctc tttctatttt
     4861 tctttcaaat aggtcaaatc attcttaaca agcgtatctg ccaacaattg ttcctgttga
     4921 gcaacttcct cttctgacca agcatagtaa gccgccattt ctttcaaaac gtctggtgct
     4981 actgcatcca actgctcacg cataaagagc atgtagttgg tacgacggag aagatagtca
     5041 actgcggtca aggtcatctc ttccttcata gcataatgaa gggaaagcaa gtcacgcttg
     5101 ttcaagcctg aaacggcttc tactttatgg ttcaaggcaa agacttttgg cgcatttgaa
     5161 ccgtacaagt ttgccaagta aagcgcatca tcatagacaa gacctttctt cacacctagt
     5221 tgagccagat gttcgatttc ttctgcaacg ttagccgggt ttaattcacc accagagaca
     5281 ggataggtct tagaattgat gagtttgaag ctacgaccat gttcttcgtt gagaatgtct
     5341 gccacttttt caattgcacc ttccgccatc ttacggaagt cagtaatctt accaccagca
     5401 agagtcagca aaccattgtc atcacggtca agggcagagc cacgtgatac agctgaagga
     5461 tccaagtgtt tttcagaaac gctgccttcc aaatgtgtca aatcatgttc cacatcgtca
     5521 cgtgtctttt cattgttcaa ataacctttg accgtttcaa tcaagccatt aaagctgtca
     5581 tcgctgagtt ttccgttgtt tccaccattg tagtcagaag caccatttcc agacaagagg
     5641 ggacgaagac ctgcccaacc gctctcaatg tcatccaggg tcaagtttgc ttctgggaag
     5701 cgattgttga caatatcaag caggtagtca acatcttctt gggttaccat tggattcgcc
     5761 aaatcgccag tatagtctgt atctgtcgta ccaaaatagg ttttgttttc acgcggaagg
     5821 acaaagacca ttcgaccatc tgcgtgacca gtatcaaagt aagtcggctg tggtacagac
     5881 aagcgagagc tatcgacaac taggtgcaca cccttggtcg gacgcatctg gagaacgcct
     5941 gaaccttctc cacccagatt acgcacttca tcactccatg gtcctgttgt attgatgacc
     6001 aaacgcgcac ggatttcaaa ggtgcggtct gtcagcaaat cacgagcgac gataccgata
     6061 acttttccag cctcatcttt gatgaatttc tcagctttga cacggctggc aatcaaggca
     6121 ccgtctttgg ctgcacgttt gatgttttca attaccagac gagcatcatt gttacggaag
     6181 tccagataaa caccgccacc aatcaagcct tcttgcttca agtttggttc gcgttccaac
     6241 acttcttctt tggtcaaaac cttattggcc atatcggtat tgttgacgcc agccaagagg
     6301 tcatagaggt ccatagccac tttcaaacgg aagagactaa aggttgaacc tggctcgtca
     6361 tagactggga gcaacattgg gtctggtttt ggaatatgtg gagcaatatt ttgcactact
     6421 gcacgttcag atacagtatc ggaaaccact tccacatcaa attgtttgag gtagcgaaga
     6481 ccaccgtgga ccaatttggt tgagcgactt gaagtccctt ctgcaaagtc ttgcatttca
     6541 atcaaggctg tttccatgcc acttgctgct gcctgtaaag ctacaccagc tcccgtaata
     6601 ccaccaccga taatgaggag gtcaagttga cgatcctgca ttcgctcaat ggctaagcgt
     6661 cttgtttctt ttgaaaattc catacgattc acttcctaac atttattcag acggattgat
     6721 tagaagagac gaattgtccc ttccaaccat tttttccctt ttaatcttct tctacttctg
     6781 caaatagttg tgttgcggca actgcttttt tccatccctt gtaaagttgt tctttacgag
     6841 catcattcat agttggttgg aaggattgac cgacagcgtt gagttctttc aattcatcca
     6901 aatctttcca gaaaccaact gctaaacctg ctaagaatgc tgctccaaga gctgtagttt
     6961 caaggttttg agcgcgtgcg atttcaatac ccaaaatatc tgcttggaat tgcatgagga
     7021 ggctgttcat agctgcacca ccgtcaacct tcaagacaga aatatcaata cctgtatcca
     7081 attgcatggt gtcaataaca tctcgaactt ggtaggcaat ggattgaaga gttgctttga
     7141 cgaagtcttc tttagtcgta ccacgagtga gaccaaagac tgagccacgc gcatcagagt
     7201 tccaatacgg agctccaagt cctgtaaaag ctggaacaac atagacttca tcattgctgg
     7261 tagacttacg agcaagctct tctgactcag gtgatgtagt caccattcgc atgctgtcac
     7321 ggagccattg aaccgccgaa ccagcgataa agatagatcc ttcaagcgca taatagactt
     7381 tgccgccgat accatagcca attgttgtga gaaggttgtt ctgtgacaac tgcatctctt
     7441 cacctgtatt catcacgatg aaggaaccag ttccataggt atttttcacc atacctggct
     7501 caaatgccaa ttgtccaaat agagctgcct gttggtcacc tgccatgcca gagattggca
     7561 cttctgcgcc atagaaatgg aatggagctg ttgtgccgta aacttcagag tttgaacgaa
     7621 cttccggcaa catggctttt ggaatattga gaagagataa aatttcatca tcccatttca
     7681 actcttcaat gttgtagagc atggtacgag ctgcgtttga ataatccgtc acatggcatt
     7741 tcccatcggt caatttccat accaaccaag tatcaatggt tccaaataga atctcacctt
     7801 tttcagcacg ttcctgtgct ccaggaactt ggtccaaaat ccaacgaact ttggttgctg
     7861 agaagtaggc gtcgactact agacctgtct tttgatgaat catatctgca tgaccatccg
     7921 ccttcagctg gtcagcaata tgagctgttt gacgagattg ccagacaacg gcattgtaaa
     7981 ttggaagacc tgtttcctta tcccaaacaa cagttgtttc acgctggttg gtaataccaa
     8041 ttccttcaat ctgatcagga cgaacaccgc tttcgataaa ggaccctgca atcacagact
     8101 gaacagaatt ccaaatttca ttggcgttgt gttcaaccca acctggtttc gggaaaattt
     8161 gcgtaaactc tttttggtaa ctgccaacct tttcaccttt tttattgaag ataatggcac
     8221 gtgaacttgt agttccttgg tcaatggcca tgatgtattt ttcagtagac ataggtctcc
     8281 ctcctgtttg tttatctttt tttgaaaacg cttccgtttt cttggtaatt ctattctaac
     8341 ccattcttgt gaatttttcc tatcattttt ttcaaaaaaa taaaaaaatc tgataagcag
     8401 tggctagaaa gatgattcta tcaactgtta tcagagttta taaaataaat ttttcaaggt
     8461 taaatgcact tacatttttc acaaagacta tctgacatca tctagcgatg ctcgatagga
     8521 aaagaagttt tggtcgccat aatctctgat tgacaggact tttgatgata tatatcctgt
     8581 atccatgcct ttaattgtac gatgtcttgg attttcaatc gatttcctag gcaataaact
     8641 ggaatgcttg tattttcgag gtaatctgta atgatcaaat catagtcata tcctgcttga
     8701 taaggctcaa taagaacctg acgattgcct tctaacttct cccttagttg caacaagaga
     8761 ggataggata gaacctcatg tagggaagaa gcaaaagcaa ccttgacctg tataggctgg
     8821 acctgactaa aataaatata caaatccgca atatttgtca gataagagtt ccttatttct
     8881 ttatcgactt ttctatgaaa aactgattta tagacgtctt ttagcaagtc ttctgcttct
     8941 ggatagaaac tagaagcttc tacttcttcc agttcaacgg aagaataaaa gaaatatagc
     9001 tggctcataa tttggttcag atgatagagt gcttcttctg agactggtaa attttcctca
     9061 aaatataacc gtaatttctg aagagccaaa gaggtagctt ccataatcgg cccaccgaaa
     9121 ccaagaacct gctctaattg atgcggtgct aaaatgaaat agctaaacag gaaagcaaac
     9181 aacgccataa tttccccttc ttggaaagag gtggattgtt gctgacttag tgtaaaatac
     9241 atctttctca aacgtcggta aaacttatgt tcttgatagg gatccatcaa tttgtaaagg
     9301 tgcttaaaat ctagctgtcg caatcgagag cgttgctgtg aaatcattaa ccacaacaac
     9361 agacgatggg cttgcttggg attgagcggc gattgataga agcgttcgaa aaccggcaat
     9421 aatgcctcta ttttccctag cataaactct tcttgcaatt ccgctctcgt agtagtcaaa
     9481 ctcaacattt gatgtaaaaa gtaccgtatt tgaagctcac taccttttag acgaccactt
     9541 ttgattccaa taccaaattc tgccaatatc tggttcaaag aggcaagatg gcgattcaga
     9601 gtcgcttcgc ttatcagcaa ttcttgagcc agctgttgaa tagaaacctc ttccttatca
     9661 gataaataaa caataatttg atatttggta ctggtttgac agagataggc taggatacga
     9721 tgaagactca aactggcctt tttcttcaaa aagacctttt catcttcgag ttgaaaagag
     9781 agtcccaagt cggttacttc cgcttcttca ttgaaagata caatatagcg aagaagagtt
     9841 gattttgaca attctaaata gtgacaaata tcctttagcg atggcgcctc tctcctatct
     9901 tctaagtaga ggaggagttg ataaatggcg cgctcacgct tttccaataa ggaatcaatc
     9961 cgcatagaca ccctccccat cagcctgata aaattgccga atatactctt gagcggcctc
    10021 tacgatgaag gggaccagag gagtatttcc aggaagacag agccaagaat gttctaccaa
    10081 gtcaaagacg gtcaaatcct ttgaaatcgc tagagacagt acatccatct gttcaatata
    10141 atctgcagta gaaacgagtt gtccccctag gatgcgccca ctcgtttctt cgacaatcag
    10201 cttgaaatct actaaagttg gttcccactg gctatatgac cttctaatcc gaatcgattt
    10261 actctccaac cacaagctcg cctcactctc ggtcaagcca aggctagtta tataatagcc
    10321 aaatacatga ctagaaacaa tccgctggac tctcttaata ggagcaatcc tcttttgcaa
    10381 atttcgagca gccatcctcc ctgtcataat cgcatgatga atcatcggaa gatatgactg
    10441 tccaaaataa tctactggga gactgaccaa atcacctaca gcaaaaatat tctcttgact
    10501 tgtttcaaga aactcatcca cccatacagt cccttctgca gtcactttta gcctgtcttt
    10561 cactggctga atattgggcg tcaaattggt ggatggcaag actaaatcag ctggataatt
    10621 acctgtgact gtatgacaaa ccagctgttc ttcctgagta tcaatcgtta tctgattgac
    10681 tgtttcggat aaatgaagtt ggattcctct tttttccatc tcttgacgaa tcggcacgat
    10741 catatcctca tcaacgtact ttgcaaggag tgaatcttgt gcctcaaaca catgcaaatt
    10801 caaatccaac tggctaaggg catccaagct ttccaaacca atctgtcctg ccccaatcac
    10861 tgcaactgtt tttgcatttg tcaatttctc tagactagct tgtgcttgag atagcgtttt
    10921 tgagcgaatt agatagtctt gaagctcttc cgttccccat tcccatgttt gactagctcc
    10981 catagccaat attagccggt cataaataat atcacctata tcttgatgat gccgtatctt
    11041 tacctttcgc atttcgggat aaactgcgag acattctgtt tcaaaaagac aagaaatagc
    11101 tgcatgttgc acctcactga acaaagaaat cttcgcttct tcccaaccag aaattttttc
    11161 tgccactttc caattcaaga tatttggaaa gtaagccaca tctttttctc tatcaattag
    11221 tgttatctga gcattctgat acaattttcg acattccaaa gctgcgctta aacctgcaaa
    11281 ggaggcgcct ataataacaa tattcatact taatcctttt atcgttttta gtcattatat
    11341 caagaatgcc aaaaaattga aaaggcttgc aactaaaaaa cacaccagat aactgatgtg
    11401 cttgtgtaaa cttaaataaa acgaggaaaa tggccagaag ctcctctaga ttaatgtttt
    11461 tctaaacacc tcactcttta tgccctaact cacgttaaaa tagtcactcc cctgactatc
    11521 ctcgctttgg catttcttgg ctcgggttaa aaacgtccac tggacgtttt taataatctg
    11581 gtcttacgac ccctgtcaca gtggctttgg ttgcttcgta gtcgccgtca acgactactt
    11641 tgataatgcg tttggcatct ttttctgggc atggaaccaa cggcaagcgg agtggaccaa
    11701 cttcaaatcc aaggtaatta agaaccgcct taactggtgc aggacttgga taggagaaga
    11761 gggcattgac tttcggaatg aacttgcgtt gaatagcggc tgctgttcga atatcttgtt
    11821 gttcgatggc tgtaaacatt tcatacatct catcaccatt cgtgtgagat gcaacagaaa
    11881 tcacaccatc tgctcccaag ttcattgcat ggaaagcatc gccatcctca cctgtataaa
    11941 tcaagaagtc ttctggttta tgctcaatta ggtaagccat gttagcaagg cttgtacact
    12001 ctttcacacc gatgatattt ggatgttctg ccaaacgtaa catggtttct ggcgtcattt
    12061 caacgacaac acgacctgga atattgtaga taatgattgg taaatcagag gcatccgcaa
    12121 tagccttgaa gtgctgatac attccctctt gagagggttt gttgtaatat ggcacaatgg
    12181 caagacctgc cgcaaagccg ccgaatgccg ccacttcttt ggcaaactca atcgagtcgc
    12241 gcgtatcgtt tgtaccgata cctgcaatta ggggaacacg accgttgaca attttttgca
    12301 cagcaccaaa tagttccagt tcttcctcgt gtgtcagggt tggactttcg gcagttgttc
    12361 ctgctaataa aatcccttct gtgtgatggg acaacagatg ctcaatcaac tcaggtaaaa
    12421 cttcaaaatt aatcgaacca tcttctttga aaggggtaat cattgctgta ataattttta
    12481 catcacgtaa atcttgaata gacataggct tcctctctta ctgattgttg ctaaaaaagg
    12541 ctgagtgcag ccttttgtgt acttttggtt aataaaatta tttcaattca aacttcaatt
    12601 ctgccgttgg acgaactaga ccacgctcat gaagggtttc agcgatttga acagagttcc
    12661 atgcagcacc tttgagcaag ttgtcagaaa caacccacat gtgaataccg ttttccttgt
    12721 ccaaatcttt acggatacga ccaacaaaag tatcacgact accaacagca ttaatcgctt
    12781 gcggataaat ttgattagcc acatcgtctt ctaaaacagc ccctgggaag gatgcaatag
    12841 ctgccttcac ttcatcaatc ggtgcaattt ctttagtttc aatgtaaaca gactcagagt
    12901 gagctgacaa gactggaata cggacgcagg ttgcagaaac ggcaatgctg tcatcttcca
    12961 tgattttctt agtctctttt gtcatcttca tctcttcata agtgtagtca ttttcagtga
    13021 agaggtcgat ttgtggaata gcattgaaac cgattgggta gtgcttctta tcgccaccag
    13081 aaggaagaat attcgcttct accgcttttg gttccacgcc atcattcaag acagaacgaa
    13141 gctgagcttg cgtttccaag atagctccca tacctgctcc agagactgcc tgataagtgg
    13201 atacgatgat ccgctccaag ccccatttct gacgaacagg ctccaaggca accatcattt
    13261 gaatggttga gcagtttgga caagcaatga taccattgtg ggcatcaagc gcgtgagcat
    13321 ttacctcagg aacaaccaga ggaacatctg gattttgacg gaagtaagag gtattgtcaa
    13381 ctactacagc tcctgctttt acagcgtaag gagcgtactt ggcagatgta gagccaccag
    13441 ctgagaagag ggcaatatcg actccttcaa aggctgtttc tgttgtttct tcaatgacaa
    13501 tatcctgccc cttaaactgc aaggtcttgc ctgctgaacg ggcagaagca aggaaacgca
    13561 ctttctcgat tggaagcgtt gactcttcca acattttaat catttgggca ccaactgcac
    13621 cagtggcacc aacaacagct actacatagg ccatagaaat ctcctttaag tcaattcttc
    13681 aaaattttct aaatatttta tatttaacaa ttatatcata attttttcaa atgaaaagcc
    13741 ctgagaaaga atttcccaag gcaattactt cgaacctcta ttcaccagtt tagatggaca
    13801 tgctcaactg tgaatgctct tcttatttat ctaatgagcg aacatagtag tcaacagcca
    13861 tcagagcttc tgctacatct tctgctgaaa taacaaatgg cataccgtga attgtttctc
    13921 cttcaatcgt cgcttgttgg ccgactttca atagatcttc ataactagca tcagccaaat
    13981 gtaactcctc caaagttgtt ggaagattca aggcttgata gaaacggatg tatttttcca
    14041 attcttcttt cggacggttt tccaagaaga gctgggtcaa ggtcccataa gccacttttt
    14101 caccatgtgt caaatggtga atgtctccct ccaaggcggt gaatccattg tgtatcgcat
    14161 gcgccgcagc caagcctgca ctttcaaagc ctaaaccact tagcaaggta ttggcttcaa
    14221 caatattctc taaagcagct gtcacaacct tggcttcaca gctggccatg gcttgaagtc
    14281 cgtattcaaa gagtgtttgt tcacaggttt gtgcaatagc gataccagca agtgtctgac
    14341 ctcctcctgc catcgttgtt ccattgcttt gtaaaatagc acgcgcttct acccatgtcg
    14401 ccaagccatc tgcaatacca gaagccaaaa gacgtggcgg tgcttgacaa ataatcgctg
    14461 tatctaccaa gacaagatct ggatttttct tatagaaaat atagcgttca aacgcccctt
    14521 cttcagaata aatgacagat aaagcagatg tcggagcatc tgttgaagca attgttggag
    14581 caatgacaac tggcactcct agtaaatcag caatcgcctt ggctgagtca attgtcttac
    14641 caccacctag accgattacg acgtcactag cctgttcttt tccgatttct acgacacgct
    14701 ggatttcctt gtcagatgct tctccattaa aggcaacacg atggacttgc atcccttctt
    14761 caacgagata ggacaaaaac ttctcaccaa caatcccata tactaaatca tcacaaagaa
    14821 tcaaaggctt tgttcccaat tttccgatag cttctgcacc ttggaaaagg acatgtttac
    14881 cttgaatata gcgagatgga cttgcaaata ctttcataag aattcctcct tgaaataata
    14941 gatagtgtta tattgagtaa taaacgacag tgagcattgc cgaaagcaag agacatgagc
    15001 ccgtatttta aatattgcca ttgtacagcg ctgcctacta gcaacgtgtc aagcaatctt
    15061 ctcctatctc tagtgcaatt tccttgaaaa ctgcctccag cgacaataga ttgctagagt
    15121 tggcagacaa aagcaactgt tgactccact tcagcctggc ttgaaattct tctgattcct
    15181 gtgtcaaata ggtcagaagc aagtagagga caacatttcg tttcaatggc tcatccacta
    15241 aatcctctct tctttcgctg agctttgatt ctatttgttg aatcacgtcc caagcatcac
    15301 taggtaggtc taatgttaca caagtagaaa gaacttctaa gacatcttgt acttcttttg
    15361 ataatatccg agcttcaaaa ttctctatag cttgaagact acctcttaat aaaacgcttt
    15421 caaaatctct gataagaata tcatctacca agctgaatag atgatttctt tttacttctt
    15481 ttatggctgc tagataaaga agagtattga ccactccatt tatcaactcc gaggtaggtt
    15541 gtgtcaataa ttgctcccta tccgctataa ttagctggat ggactcatta aacaatggtc
    15601 gctctctttt cttattttcc accgataccc aaggtagagt ggtaaacggt gaaatcggta
    15661 taagaacagc tggcaagtct agtaaatctg caacagcctt tgtacaagct gctacagaac
    15721 tattaccaat gccaataata tggtctgcac gatgtcggaa accaacttcc ccatattctt
    15781 caaccgagtt ctggtcccac tcctccatat aggctatttt aacaataagt ccatgacaag
    15841 ttaaaatttt cacaaagctt tctacagtcg tattatactc ctgttttgca cataaaacaa
    15901 gggggcgatg acctattttc aaaatgtcaa tcgcacaagt gtctaaaaga tgatttcctt
    15961 ggatagtgcg tgaaagacct gagaattgtt tcatagtgcc cccttatttt attatataga
    16021 actgtttaga tagtatatct tccatgaatg gcagaccaat catctgcaaa atcatttacc
    16081 gccttttcaa tggatggcat agaaaaggct gcttcaaata catctgcacc tgccgtaata
    16141 gcctgcgccc catttgcaaa tgcttggttc acttgatcca catttttgaa tgatgctgct
    16201 aaaattttac tttccgaaca ctccctatca atcgcttctg ataactgagc gatgaccgca
    16261 ttcgaatcaa tattcagatt ggccatgcga ttgtagtacg gtgccaagta atctgcaccc
    16321 gcttcaatag ctaacaagcc ctgaaaaacg gtataaatcg ctgttgctgt aatctgatag
    16381 ccttgcgctt tcaatgtttt catagcagcc aaaccagcag gcgttaccgg aaccttaata
    16441 tagacatttt ccggtgccaa ttcacgaatt tttttagcgt ctgccaaaat cccttcataa
    16501 tcctttgcca caacttgcac atgtagtgaa gcatttggac cgatgatatc acggataagg
    16561 tgcaaacgtt caaaaaagtc aatgtcacct tctttcttcg caatcgttgg gtttgaggtc
    16621 acccccgcaa ggggtaaaac ctcagcccat tttcgtattt cctctatatt taaggtgtcc
    16681 agcatgaatt ccataataat aacctctttt acaatgtatg ttctgtacga ccaatgatgt
    16741 cgtcttgtgt tgctctcgac aatacattga agaatgctga ataacctgct acacggacaa
    16801 tcaaatcacg gtgtttttca ggatgtagtt gtgcatcaat caaggtttct cgagagacaa
    16861 cattgtactg aatatgatag ccatgcaagc ggttaaagaa tgtccgcaag agggcaatta
    16921 atttttgttt gtcttcttct ttggcaagtg tttgtggatt gaccttctga ttgagcagaa
    16981 cgcctccaac aatttcatgt gttggtaatt tggcaactga tttcaaaacg gatgtcggtc
    17041 catttttatc catattatgt gatggagaac aaccttctgc caacggtgta cctgcatttc
    17101 gaccatctgg agttgccaag gtaccacgcc cctgtccaac attggctgaa atggatgatg
    17161 tacctgaata acggatacca ccaatcggac cacgaccaaa gcgagtgttt ggatatttgg
    17221 caatctcatc gatataaata tcatacgctg ctgttaccaa ttggtctgca taatcattat
    17281 cgttaccata ttttggtgca tcttcaatca acatttcctg gatttcttta ccacgctcac
    17341 cagcatagtc tgtttccaaa gcgtgccata attcttctgg tgtcaatcgt ccttcttcaa
    17401 agactaattt tttgattgct gctagagaat cagataaatt ggcaatgcca acctgcagac
    17461 cagaaatgta atcgtaaatc gctccacctt ctttcaggtg cttgccacga ccgatacagt
    17521 catctgtcag agctgagcag agaatgtctg gtacttctct ttctaaagca atgtcaattg
    17581 cattttcaac gatgacactc atccgtgtta gatgacgaag cgtcttttcc catgccgttt
    17641 caagctcctc aaaggatttc atatctttga agtgaccaaa ggctggtgca aaccgtttgc
    17701 ctgatgcagg atcgatacca tcattcatgg taatcaataa aactttcggg aagttcatat
    17761 agctcatacc tgtacaacgg tatccccatt taccaggaac agccgtttct acacagccaa
    17821 tcgcactgta gtcataggca tcttcttcca agacaccttt ctcgataaag gatggaatga
    17881 taatttcatc gttgttgaag gcaggcatac caaaaccaag tttcatgact tcaatacatt
    17941 cattcatgaa gcgagcatct aggcctgcat gatagcgaac agtcaagttt ggctgtggca
    18001 ggtgtgtttg ggcaacagat ttcaatacta agtaagaaag tggattgaca gcatccttct
    18061 tatcacgtgt ttgtccacca attgttacat tttggtatag tggactacca gcagatgaga
    18121 aggtatgtga ttgactacga accttgttga tagtaatggt cttaatccac aagttagtca
    18181 agcgttcgac gatgctatct tccgtttcac gtcctgcttc taaatcagct ttcacatacg
    18241 gatacatgta ttggtcgaaa cgtccatagg atagagaatg tccattggac tcgatttgca
    18301 agatacactg gataaaccag acagattgca ctgcctctgc aaatgtttca gcaggttcat
    18361 acggcacctt cgcacaaatc cgtgcaatct ccagtagttc ttgacgtcgt tgagctgttg
    18421 gtgctttctc tgccaattca gtagccaagg cgacaaaacg atctgcgtat gctttcaccg
    18481 catcaatgat gataaagatt gagtcataga aatgatattt atcaatactt gcaggatccg
    18541 tcaaatcaag attagccttt gctgcacgaa ctcgctcctc aaagccacgc aaaccttgtt
    18601 ccaatacctt ttggtaattg acagccaagt gggcatcgcc agagttcatc ttaccttcca
    18661 taccaaagaa gccagtttcc atataaactt gaacttcttc tggaagcaag acacctgcac
    18721 gtgaacgaag attattcttt tcccagaatg gagcgatgct gcgcaactgc tccttagttt
    18781 cctcggtaat atagaagaca tccccatccc gtttttcgaa taaatccaat tcattcaata
    18841 caaactccaa ggtatattct gggaagatgg gagcatcttt atttgaagaa gcttggttac
    18901 ctgcaatcag actttcttct tcaatataaa gcgtcatgtt ctccaatatt tccttgagca
    18961 tataggccct ttttaataca ttgggcttct ctctatgttc ttgataggct tttgttgcta
    19021 aaacagcccg ttccgcgtca atatagggct tcttatcaag gacatcttct ctgtatttgt
    19081 tcatccgatc agtcagactt ccaaaatact cagttttaat gctagtgcca gctacttcag
    19141 tcactgtttt catagtttta ccctttcctt cgaaacttaa ttttgtttcg tttgtaaatt
    19201 aagtatatcc tgtaataggg ggtattgtca attgatgcta gtgagagcta agatttccga
    19261 agccggctgc acatttgtgc aactcttttg tctgacatca ttgactaaac tggttctttc
    19321 atttcacttt cataggcaat cttatcttgg attttgaaga atgggaaata aacaatagtt
    19381 gagacagcta aaataatgat ttgaacaact gcaccttgcc aaccacccac cataaaacca
    19441 gaaatgattg ctggggtaga ccatggtagg gtcacacctg aaaatggttg cataaagcct
    19501 attgagattg caccgtagac aatgaaagcc gctaagatcg gtaccaagac aaatggtaag
    19561 aacataacag gattcatcac aattggaaaa ccaaagacga ctggttcatt tacgttaaag
    19621 agtgcaggaa aggccgctac cttaccaaga gccttatatt gtttagattt agcggcaaat
    19681 agcattgcaa aaacaatacc gaaggtaata cctgaacctg acataatcaa gaaactatct
    19741 aagaattgtt gggtcacgat gtgggcgcca ttttccagag acaatttatc tgctgctaaa
    19801 agggccttat tggcatcgag gtttgacaat agtaaagcag taacgacacc attgacaact
    19861 gactggccat gtacaccaaa ccaccagagg aaggaaatga agaaagcaat tccaatcgca
    19921 cctggtaatg aaccagtcaa accttgtagc ggcacttgaa tcacatcgta aatcatttca
    19981 atgaatgtac caccgtttgt cgccatcttg gaaacaatat agacaatcat agatagcaaa
    20041 aagatgacaa aagctggaat catagcttca aactgcttgg caatagcttg cggtacttgt
    20101 tcaggcatct tgataacaat atgacgctga ataaaagtcg tatagatagc gcccactacc
    20161 aaaccaataa taatcgcacc gataattcct tgaccaccaa accatacttt tgcgatggca
    20221 tcaccgattg gttctccatc aactggaata taagatgatt tcaagaggat aaagaatgaa
    20281 gacaaggaca gtacgcccgc agggagaggc tcaactccac tatttttggc gtaagaataa
    20341 ccaatcgcaa aacaagaaat caagcccata atcgcaaagg ttccgctata gacttgcata
    20401 aacggttcag tccattccgc tccaaagata gaagctattg cagcatttaa gccttcaaaa
    20461 ggcaactgcc ccaaaattaa gaaaatacta ccgactactg ttaaaggtaa gatagccaac
    20521 ataccatctt ttagagcgat gatccctttc atattcacaa atttcatgat tgggacaata
    20581 attttttgtg tatcaatttt ggacatgacc atactccttt atgaaaccat gctgagtgcc
    20641 aattgaagaa cttttttccc gtccaacatc ccgtagtctg ccattggaat cacggcaata
    20701 gggacttgct tttcatcaca gagcgctttt gacttatcaa gcgtatatgc tacttgtggt
    20761 cccagtaaaa ccacatcgat ttcgtcaagg taatctgcaa ttttcccttg ggaatgcgcg
    20821 tcgatttcta cttcgacacc tgcgtctgct gctgcaatct tcatgttgtt taccaacatg
    20881 cctgtagaaa aaccagcggc acaaaataga gcgattttaa ccatttcggt ttcctcctaa
    20941 atataatttt tttgttttag ccaacttttt ttagttcttt ccgcaaatca atgatttctt
    21001 taatcaaatt gatctctgta atagatgtca tcaaatgatc ttgcgaatgg acaaatagtg
    21061 ctgtaatatc agattttgct cccccagctt cctgtgctaa gaattttgtc tgcatattgt
    21121 gagcttctaa taatgctgca tctgccaatt ctaattcctc ttctgctcgc tcttcttcac
    21181 ctgctttgac aagcgacaaa gcttggtagg cgtgactttt cgcatctcca gcataaataa
    21241 tcaatcccat gatcaattga tctgcaacaa tcatttccat ttctttttcc tccgatttgt
    21301 tttatttgta agttattata tttctttcgt aagtaaatca tatcattttc tctttatagc
    21361 gtaaatatat ttatagaaca ttttctgttt taatttattt ctgcactttt gtgcattttt
    21421 tggggataaa aaaatacttc aaccaccttt aagcgattga agtactctct tacaaatttg
    21481 tatggacatg cacatcatta tccagttcta aaacttttac gatggttcgt tcatctgtta
    21541 ccagatgatg aatgtagcca gctcgcaata cagctaaaat ggcttgagcc ttttcctccc
    21601 cgtatgcaag agctatggta tctggaactt cttttaaatc atctaaagag atggcaatgg
    21661 tcctcttttg caaatcctca acgatagctt gaccgtattg attcagacca cgacagcagg
    21721 tttcaccgac tgcaccttca tctgacaagg cttgaaaatc agccgtcgtc aacatatcta
    21781 accactgacg atttttttca tcgactcggc caccaatacc tattgctgct acatctaagt
    21841 ccttccagtc agcacgtagc tcctcgaaat atttagaaga gagaatacct tgagcaagtt
    21901 cttgattctc ctggataatc gtcgcattga taaaactaca ttctccacga aatttattgg
    21961 ccatatcgta aatcagggta ttcacatgat aacgtgcgtg gatatgactt ggaccgccag
    22021 ctattggaac aaatttgaca cctttcatac gatgattccc tatcttatct acaataagac
    22081 tgaggcttct cccccatgaa aaaccaactt tctttccatc atcaattaga ttggtaagca
    22141 tatcggctgc agcctgtgcc agacgatttt ctaaatcaag ctggtcctca tcggtgctgt
    22201 tttcaaccag ttctaaacct tttaatccat atttttcttg aacatatttt tctagtcggt
    22261 ataggcgcct atcaaaatct tgaatttcta tttttacaat gccttctgac ttagccttgg
    22321 tcaacattct actgactgtc gttctataaa ttcctgtctc agcagcaatc tcagcttggc
    22381 ttttcccctc ttcatagtaa agataggcta tttttgccaa ctgccttctt ttttcttgct
    22441 tcatactgcc cccaacctaa actagcctta ctgtgactct agcattttct aattccttga
    22501 caagatcttc agaaatcgac gtatctgtaa taacctgagc aacttgactt aaaccaaatc
    22561 tgcgtactgt ccctcgtttt gtaaatttac tagaatctgt taacacaatc atgttttcag
    22621 caacgtcaga catgtactgt actacttcgc ttcgcattaa gtttttacct gtaaaaccat
    22681 gctcactatc atagccgtca gttcctacaa aagccttatc aacatggaaa aactgaatca
    22741 ttttatgcaa gagcggccca actgttactt gggaatcttt ttgaaactca ccacccaata
    22801 aaataatctg acagctatca tattgtcgca cataattggc tataaaataa gaatttgtta
    22861 tgatggtcac atttctcttg gttttgcaaa tttcttctgc caagagagca caagtagacc
    22921 cagactctat cataatcgtt tcattgtcgg caataagatt tgttgcttct tttgcaattc
    22981 gtttttttac gtcatagcga aaggacatcc gaatattaag gtcatcgcca ctatttagaa
    23041 cagcatagcc gtgttctcta cgtaataaac cttttgattc taacttatct aaatctttac
    23101 ggatggttac cttagaaacg tccagttgct ccgccaaact attgacatct attttttcat
    23161 gttgtgatac cagttgtata attttatcta atcgttccat ttcatcacct catcattatt
    23221 ctatcaaatt ttgactcttt ttcaactatt tgcaactttt caacttgcgt tcgtaattgt
    23281 aaaactttct tttgtgtgat aaaatcaaat taatcgaaaa ggagaaagag catgaataca
    23341 cgaaaaggca ttatttttaa cattcaacat ttttcgctcc atgacggtcc tggtatacgt
    23401 acgacggttt tcttgaaagg ttgcccccta cgttgtcctt ggtgtgcaaa tccagaatct
    23461 caaaaacgaa aacctgaacc catgcttgat gctgttagta aaaaaatgac catcatggga
    23521 gaagaaaaat ctgttgatga tatcatatcc gaagtcatga aagacattga tttttatgaa
    23581 gaatctggtg gtgggctcac gctgtctggc ggagaaattt ttgcccaata tgagtttgcg
    23641 aaagctattc ttatggaggc aaaaagacac ggccttcata ccgctattga aaccaccgcc
    23701 ttcgtagaac accacaaatt tgttgacctt atccaatacg ttgactttat ctatactgat
    23761 ttaaaacatt acaatacaat ttctcataga aaagtcaccg gcgtcaacaa taaccttatc
    23821 atacaaaata tccaatacgc cttttccatc gggaaagaaa tcgtcctacg tatccctgtt
    23881 atccctgact ttaataattc cctcgaagat gctgaacaat tcgcctgtct ctttaatcaa
    23941 ctcaagattg acaaagttca actactcccc ttccatcaat ttggagaaaa taagtataag
    24001 cttctcaatc gaacctatgc tatgaccgat gtcaaggctc tccatccaga agatttaaaa
    24061 gactatcaag caatcttcat caaacataat atcaactgtt atttctaact ttgagaaata
    24121 caaaaacttc ctcggctgag ccaatagcat tcctatagaa gtcacatact gaaatatgct
    24181 tctgatagag tatctgaagc atacttagta tacaaaaagc ccaccataaa ggtgggcaag
    24241 ggcatcgttt ccgatgagaa tagaaggttc acacaactat tcaaggtccg ctcctgcgtt
    24301 tcaattaaat gaagacctcc ctagcgtcga atgtgacaaa gtcactactc ggctcatcgc
    24361 atgaatctat tctaccataa tctcaaggat ttgcaagcct gattactcca ttcgttcttg
    24421 aatggttact tgtactctat caccagcctg ttttccaata gccagtcgag tagccttttg
    24481 aacgccaata atataacaga tattgcctgc ttcatcctta actcccatat ttacgattga
    24541 accatcataa ggatgtccat caaaagtcgc atggactttt actctgcctt taccaaattc
    24601 ttctcgtata tcatagggga aatatgacat atgctccgcc cttatctggt actagatgga
    24661 taagggtttc aaattcatag actttggaca tggctcctcc tagatatact tactggcttc
    24721 gcgaatggac aagcctgcca tttgtgagct gtacttggta agaaaaactc gtacccattc
    24781 aggattggtc ttggaataat cccgcaaact ccagccaatt gccttattga taaaaaattc
    24841 agtctgattg agattgttaa caagaatctt ctcaagtagt tctgtatctg tcttttcttt
    24901 ttgcaaaagt tggtggtcaa tagcaattcg tcttagccag aaatcgtcat ctacactcca
    24961 ttccaaaatg gtctgcttgg cctctggatt ttccaagaca atcttaccaa ctagcttgtc
    25021 cagtccgtca atactatccc accaagactt ggtctgggct aattttttca agcgtggtaa
    25081 atcagttaaa accaagtcct ttttcttggt aaccagataa tcaatggcga tatattgaaa
    25141 ttcacggtag ggtttagacc agcaagccgc tacaaattcc cagtcaatgc cctgagactt
    25201 aaattctttg aaaaattgcc tagcaacttt tcggcggtta ggagttcgca cacccagaaa
    25261 gtcaaaatta tttttcatat aagccttcat aggctgggcc tgactggcat ccgccacagc
    25321 caacaaacgt ttttctaatt cgtcaatctt cattttgctt acctacaaga gatttttgaa
    25381 gccagacaat atcatgccag gtatcaaatt tataaccaac ttttttgaaa tgagccacct
    25441 gttcatagcc cctcttctca tggagtgcta tagaggctgg gtttggcagg gcgatacagg
    25501 ctaagaaatt tttaaaacca cgcgctgtca gttccttttc caaagcattg tagagaagag
    25561 ttccgattcc ttttccacgt gcttcttgct tgatatatac ggataattcc accgtccaat
    25621 cgtaagccgc acgggcatag taggttgaag cataggcata acctacaaga gttccctctt
    25681 caactgcgac cagataggga aacttctcca agatcttttc aattcgactt gcaaaggctt
    25741 cgacagtcgg tacttctgtt tcaaaggtaa tagcggtctt ttctacataa ggagcataaa
    25801 ttgccacaag gtctgctgca tcctctctcc ttgcggaacg aatgtctatc atttagttct
    25861 ccaataattc tctatcataa attgtataat cacagcggta gataatcaac cgcttgccat
    25921 caattaagag ttcagaagtc ttaggtgcat cagatgcata aagagatact ttatcaccta
    25981 cataagtagc aagcggggtt ccgttttgcg aacgaatcaa gaccaccttt gccttacctg
    26041 taaaatcatt tttgagacta gataccatac ggttaacaag cggaattgca cgatcgtaat
    26101 tcgcaatatc tactgtggtc tgatatttcg catataagtc ttccaaacct tcttctgctg
    26161 caatcaaaga tgagcctacg tggtcaattt cgtaattacc tagtgtcact ttcaaaacag
    26221 acgaatccgc attggaatag ccttcggcat ccaccgagtc aaattcctga ttccgcgaaa
    26281 tcgataagga cctaccagac atttcatcta tcaattgaga attttcatcg tatgtccgta
    26341 ccgtcatctc caaaccaatc cattcttcct tagtattctt ccaccaattc gcaatggact
    26401 gacaggaaga caaactaaca aggctcaaac caagaacaat agataacatg attttctttt
    26461 gcaatttcat ataatagtcc tccaacatat tttacttatt atatcacgga atacaaaaac
    26521 cgagaaaaaa tagatagacc tgagataata aaaagatggc tatgataaac tatagcacgg
    26581 tagggatagc tgacatctac taaattaata taaaggaagt catttttatg aaacaattct
    26641 gtgcaaaaca caaaatgaag ctacttattt ttctagccgt ttggagtttt ttctctggct
    26701 gtaaagttct tcttaccttt tttgggaaag cagatggaat ggacggaaag tatcctctct
    26761 tctttctaac aatttcctta gttgcacttt atgtcttccc tatgattctt atcattcgtt
    26821 atatagcgaa acgttttgat atttctaaaa aagttatcca tctcagttgg attttgggta
    26881 taacagctag tttctacttc tctggtcttg gtcaaacgct tttaggagca ttttggttat
    26941 tcatcgtcaa accacctcaa acatttatcc aaaactgggg agcagctgtc accgccccct
    27001 tccatgaaga atttggtaaa ggactagttg tactactcgt actcctattg ctcaaaaaac
    27061 ttactctaaa aaatgccgta gtcagcggta tgattgtagg tttgagtttc caaattattg
    27121 aagacggtct ctatgtcttc caacaaatct ttaaatctaa agcagatggc ttcgccactc
    27181 ttatcgaacg tatgcttcac gctggtggaa ctcactgggc cttctccctt gcattcgcag
    27241 tcggtttggt cgctctcgtc tcaaaaaata gtggcatgtc gaaaaaacaa ggacttttct
    27301 ggatgctgat ggctgtctta gcacactttt tcttgaatac tccattcaac gaaggactaa
    27361 catctaactc tggtgaaata accgttctca tgctctgctt tagtttctgc gtggcacttg
    27421 ctgcattttt caaagtagac caaattgaaa cgaatcagca ccaccagtaa cacatactga
    27481 aataagcctg cattgacagg cttttattac gttacaaacc aagtattcga aatggttgtt
    27541 gattcatcaa tatctattat cagtctttat cccattccat cggtccaaga aatcgcagat
    27601 aattataaaa aaccgcccat tacggacggt tattacacta ttaaaaatta aaaacatcgt
    27661 tcaaattctc agccatagtc ggatgggtga agatctgtgt tttgaagtag gtataaggaa
    27721 tcttattgtc aatcgccata gcaatcaagt taatcagctc ctctgaattg cgaccaaaga
    27781 gagtcgcccc cagaacaagc ttactttcct tatccacgat aaccttgaaa atgcctttga
    27841 ggtcgttatt gacatgggca cgtggcatat tggcaacagg caattcattg gcaatgtagt
    27901 cgtaacctgc tgccttggct tccttctcgg tcagaccaac acgagaaagc acaggcgtga
    27961 taaagacgct ggttggaata gacttacgtt ggctcaagct ataagttcca gtcccagtca
    28021 acttgccgaa aacgatacgg aagtcgtcta gggatgtgta agtgaattgt ggaccgccat
    28081 tgacatcgcc cactgcgtag acacctggaa cagtcgtttc gcagtagtca tccaccttaa
    28141 cagcaccatt ttccaaaagc tcaatcgccg tattttccaa gcctaagtca gcagtgttcg
    28201 gcacccgacc tgtcgcatag aggacagcat cgaagattgc cgtttcgcca ttaaccgtca
    28261 cggcaacttg ctcgcccgca gctgctactt gctcgatttt cgcacccaag acaaaggtca
    28321 cgccagcttc ttccatatac tccttggcta acttggcaac cacttcctct tctcttggta
    28381 aaatagcaga gctggcttca tataccgtca cctggctgcc gagtttgtta taaagaccag
    28441 caaattccag tccgatgttg cctccaccga taattgccaa cttgttagga cgagtttcca
    28501 agttctgaat gcctgtacta tcataaacgt gagctgtatc caacaaacct ggaattggaa
    28561 gcacgcgcga cttagcacct gtattgatga caatagtttc cgcagtcagt tggatggatt
    28621 cctcaccagc cgacacttca acgactttgt ccgcaacaaa acgtgcgtga ccttgataaa
    28681 gattagcacc actgcctttc aagactgcct cgtttttgtt tcgcagacga gtgatgactg
    28741 tttctttttg atccattacc tgctcaaaag tccagttttt atccgcggct accaagaggg
    28801 tcttggttgg aatacagcca atattgatac aagtcccgcc aaacatagca ggattttcct
    28861 caaccaaggc aacctttttt ccagctgctg acagcttacc tgccaaggtc ttaccagcct
    28921 ttccaaaacc aatgactact aaatcatatt gttccataaa atactccttt tattttttca
    28981 acattagtct atcaaaaaag aaaatttttg gcacaattct gctacggctc tattatggag
    29041 tcctagttgc aggaaaaaac attacaataa ctgagaaggt ttagataaaa aataggtgaa
    29101 taatagacga aatgtactta tttttgatat aatgtatccg tacactagtt tattaataca
    29161 gaaaggtcaa actatgaaag aaaaatttca aatgtgtaaa acctatcttc cagtcgtctt
    29221 agcaacgatt ggatttgtca acggttgcaa aattatcttt ggagaattag gtaagccaaa
    29281 tggcatggaa gctaaatatc ctctctttct cctcacaatt tccttggtcg ctatctacct
    29341 cattccccta ctagtactga catattcctt agctaaacgc tataacatct ccaaacaagt
    29401 tataggtctt agctggcttt taggtttaac aagtagcatc tctttttctg aactgggaca
    29461 tacagctatc ggatatttcc tgctcgaaat cgttaaagct agtaataatt tcctaaatga
    29521 ctggggcgca gctatttcag gtccattggc agaagaaatc ggaaaagggc taactgttct
    29581 acttgtactg cttatttgta gaaaaatgac actaaaaaat gcattggtaa gcggagtgat
    29641 tgttggatta ggtttccaaa tcatggaaga catcaccttt gtttttagag acatgttcat
    29701 gaataaatta gacggctttg aaaccattct tgaacgcgtt ggtcaagctg gttgggccca
    29761 ttgggttttc acgcttctct ttgccattgg cttagtagcc cttctcacga aaaatacagg
    29821 tatgtcaaaa gcacagggag tattttggat tggtgcaagc tttggaatcc attttctctt
    29881 taattcacca ttcaacacgg gcatcttcca gacggtgttt cctatcttga gtattttact
    29941 tggcttactt gcctatcaaa cggttgagaa actatctgaa tagacaaaaa atccgccttt
    30001 gagcggattt tttatattct tgttagaaca agccgacagc tgtcccatct gctgccacat
    30061 ccatgttgag agctgcgggt gcttttggca aaccaggcat ggtcatgaca tcacctgtta
    30121 aggcaacgat aaagcctgct cctaattttg gaacaaattc acggactgta atgtcaaagt
    30181 ctgtcggcgc tccaagggca aactgattat ctgagaagct gtattgggtc ttggccatgc
    30241 agactggcaa cttatcccaa ccattcttag caaattcagc cagctggtta cgagccttct
    30301 tctcgaaaac cacacctgag ccaccataaa tctgcgtaac aatcttggtc actttctctt
    30361 ctaagctatc ctcagccttg taaagacgtt ggtagtttgc tgcttggtta tcaatagtag
    30421 caacaactgt ctcagccaat tcaacaccac catcagcgcc atttgcccaa acacttgcca
    30481 actcgacagg tacgccaatt tcagcgcaaa gttctttcaa cgcggcaatt tcatcagctg
    30541 tatcagatac aaattcattg atagcaacaa ctgctggaat accgtatttc tgaatatttt
    30601 caacgtgacg cttcaagtta gaaaaaccag ctttcacagc ctctacattt tcagtagaaa
    30661 gttctgtctt ggctacacca ccgtgcattt taagcgcacg cagggttgct acaatcacca
    30721 cagcatcagg agccttaggc aagttcggta ccttaatgtc aaggaacttc tctgctccaa
    30781 ggtcagcacc aaatcctgct tctgtgacgg tatagtccgc caaacgcaga gcagttgtcg
    30841 tagcgaggac tgagttgcag ccatgagcaa tgttagcaaa tggaccgcca tggacaaagg
    30901 ctggcgtgcc atagatggtt tggacaaggt ttggcttgat agcgtccttc aaaataaggg
    30961 tcaaagcacc ttccaccgcc aaatcacgca cgtagacagg actgcgatcg aaacgataac
    31021 cgataacaat atttgccaaa cgttctttca agtcattgat gtccgtcgcc aagcacaaaa
    31081 tcgccatgat ttcagaagct acggtaatat caaaaccatc ttcgcgagga ataccattga
    31141 gtggaccacc caagccaact gttaccttac gaagggcacg atcgttgagg tccacaacac
    31201 gtttccagat aattcgacgt tgatcaatcc caatcacatt cccctgatgg atatggttat
    31261 caatcaaggc tgaaagggca ttgtttgctg tggtaatggc atgcatgtcg cctgtaaaat
    31321 gcaagttgat gtcttccata ggtaagacct gagcatagcc accacctgca gctccacctt
    31381 taatccccat gacaggaccc aatgaaggct cacgaagggc aatcatggtt ttcttgccaa
    31441 ttttagaaag agcatctgcc aaaccgatag taatagtcga cttaccttca ccagctggcg
    31501 ttgggttgat agctgttact aaaatcaact taccaggcgc attttccttg acggcattga
    31561 ttttatcgaa agacaatttt gccttgtatt ttccataaag ttcaatatca tcaaagctga
    31621 taccaacttt ttcaacgatt tctgtgattg gtttcaaggt tacactttgt gcaatttcaa
    31681 tatctgtttt catgagagct cctaatttcc ttatttttta tggacattat accataccac
    31741 aacttatttt cgcatatttt ttactattta ttcactaacg tacggaattt tcagaaaaac
    31801 tacagattcc cttacttaaa cagatacaaa tttttaaaaa ctgtattctc atcatatcat
    31861 agctctatac ttccgtctaa gactgatcct tatatttttt attagtgtta tcattttcca
    31921 gtgtcacaga tttattagca aatgagttag tgcaaacttt acgaaaaata gaaattctag
    31981 taaaatatga acatgaaact attgattaca tcaggcggaa caagcgaagc tatcgatcaa
    32041 gtccgcgcta ttacaaacca tgcttctgga aatcttggaa aaatcattgc cgaacaagcc
    32101 ttgaaacgtg gtcatgaagt tactcttgtg actacaagac aggctgtcaa accaaattct
    32161 cagaagaatt taaccattat cgaaatcaca aatgttgata gtttgaaaga aacattagaa
    32221 cctttagtca aaacacatca ggccctgatt catagcatgg ctgtatccga ttatacacct
    32281 gtttatatga ctggtttaga tgaactaaga gcaactgaag acatctctag cctactaaaa
    32341 aaacagaata cagaaagtaa gatttcatcc aaggatgact accaagttct tttcttgaaa
    32401 aaaactccca aggtcatttc ctatgtaaaa acatggaatc cagctatcac actctttggc
    32461 ttcaaactat tggttaatgt tcctaaggaa gaattatttg ccgtagctcg ccaaagtatt
    32521 gaacgaaatg gcgctgatta tatacttgct aatgacttga aggatattgg agaaaatcaa
    32581 cacattgcct atttagttga taaaacaagg gaaattcaag cacaaacaaa agatgaaatt
    32641 gctcagctca ttttaaatac cctagaaaaa ggagaacaaa atggctaata tcacacttgc
    32701 cgttactggc tctatttcag cctacaaagc agctgaccta actagtcaat tgaccaagct
    32761 cggtcatcag gttacagtcc tcatgagtcg ctctgctatg gacttcatca cacctttgac
    32821 tctccaatcc ttgtcaaaaa atctggttca cacagatgtc atgattgaag aaaatcctgc
    32881 tctcatcaag catatcgata ttgccaaaga aacagacgta tttttagttg cccctgcttc
    32941 tgccaatacg atagctaaat tagctaatgg tatggctgac aacattatta cggcaacagc
    33001 tctggctctg ccaattggta ctaaaaaact gctggcacct gctatgaata ctaacatgta
    33061 cctcaatcct gctacccaga aaaatatcaa aaccctcatg gagtatggtt ttgaggaaat
    33121 caaaccgcgt gaagccctgc ttgcttgcgg cgactttggt acaggtgctc tggccgagat
    33181 tgatgtgatt ctaaacaaag taatggaggt tctaaatgaa aacaaataaa tccagggacg
    33241 ttgcgactct tgcaatattt ctaacaatca tgattgtcat tgaagtggtc agtcagatga
    33301 tttttgctaa ttttatcttg ccaataaaac cgactattac ccatattccc atcatcatcg
    33361 cttccattct ttacggtcca cgcttagggg cacaactggg tggttttatg ggaataatga
    33421 gtatcatccg caatagcata atcatttcac cgatgagtta tgttttctct cctttcgtag
    33481 aacatggaaa cttcaattct atcctgattg ccttagttcc acgtatttta attggagtta
    33541 caccatattt tgtttacaaa ttgatgaaaa acaaaaaggg gctcctacta gcaggcctta
    33601 ctggtacctt gacaaataca atttttgtct tgactggtat cttcttccta ttttctaatg
    33661 tatatgctgg ggatataaaa ttgctactag ctagtatcgt ctcattcaat tctattgcag
    33721 aattaaccat ctccggtctc ttaaccatag ctatcgttcc agttttacag aaagttcaaa
    33781 aataaatatc agaaaatcac gtgaaagcgt gatttttctt ttcaaacatg gtataatgaa
    33841 agcgtttaat agaaaaattt ttaaggagat atgcgatgac ttatcaagaa acctatcaaa
    33901 catggctcga ctttgcggac cttccagatt acttgcgtga agaattagtc gcaatggatg
    33961 aaaaaacaaa agaagatgcc ttctatacaa atcttgaatt tggtacagct ggtatgcgtg
    34021 gctatattgg cgctggtacc aaccgcatca acgtattcgt agtccgtcaa gctactgaag
    34081 gtttggcaaa attggtagaa tcaaaaggtg aagaagctaa aaaacgtggt gttgccatcg
    34141 cttacgattc acgtcacttc tcgccagaat ttgcttttga atcagctcaa gttttggcag
    34201 cgcatggtat caaatcttat gtatttgaaa gccttcgtcc aactcctgag ttgtcattcg
    34261 ctgtgcgcca ttacaatgcc atcgcaggta tcatggtgac tgcaagccac aacccgaaag
    34321 aattcaacgg ctacaaggtt tacggtgaag acggtggaca aatgccacca gctgatgcag
    34381 atgcattgac caacttcatc cgtgccatcg acaatccatt tgcagttgaa ctagctgacc
    34441 ttgaagcaag taaagaaaat ggcttgatta cggttcttgg cgaagaaact gacgttaaat
    34501 atcttgaaga actcaaagac ctcaacatca atcctgaact gattgctgaa tacggtaaag
    34561 acatgaagat tgtctacaca ccacttcatg gtacgggtga aatgttggcg cgtcgtgccc
    34621 ttgcacaggc tggttttgaa tctgttcaag ttgttgaagc acaagcaact gctgaccctg
    34681 acttctcaac tgtcgcttca ccaaaccctg aaagccaagc tgcatttgcc cttgcggaag
    34741 aattgggccg tgaagtcggt gcagatgtcc ttcttgcaac tgaccctgac gctgaccgcg
    34801 ttggtgttga agttcgtcaa gctgacggtt catactggaa cctttctggt aaccaaatcg
    34861 gtgctatcat cgctaagtac atccttgaag cccacaagca agcaggtaca cttccagcaa
    34921 atgctgctct tgctaagtca atcgtatcta ctgagttggt aactaagatt gctgaaagct
    34981 atggtgctac catgttcaac gtcttgactg gtttcaaatt catcgctgag aaaatccaag
    35041 agttcgaaga aaaacacaac catacttaca tgtttggttt tgaagaaagt tttggctact
    35101 tgattaaacc attcgtgcgt gacaaggatg ctatccaggc tgtgcttatg gttgctgaaa
    35161 ttgctgccta ttaccgttca cgtggcatga ccttggctga cggtatcgat gaaatcttca
    35221 aagaatacgg ctactttgct gagaaaacca tttcagtcac cctttctggt aaagacggtg
    35281 cagagcaaat caaggcaatc atggctaaat tccgcgataa ctcaccagcc caatttaacg
    35341 caacggacat cgcagtcttt gaggactttg cccttcaaac taagacagac aaagatggaa
    35401 atgttgaaaa actcactact cctccatcag atgtcttgaa atacatcttg gcagatgatt
    35461 cttggtttgc cgttcgtcct tcgggaacag aaccaaaaat caaattctac atcgcaacag
    35521 tcggtgaaac acttgctgaa gcagaagaaa aaatcgccaa catcgaaaaa gaaatcaacg
    35581 attttgttgg ataatcattt aaaaccaaaa agagtcgctt tcgcggctct tttctttctt
    35641 aactatgcgt atagattttc tcgaacataa acatacaaat atataaatga tgcagataat
    35701 ac
//
LOCUS       DBNFCX010000012        35622 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.012, whole genome shotgun sequence.
ACCESSION   DBNFCX010000012 DBNFCX010000000
VERSION     DBNFCX010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 35622)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35622)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35622
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.012"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..868)
                     /locus_tag="AC1PJC_000478"
     CDS             complement(<1..868)
                     /locus_tag="AC1PJC_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003076507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HIP6619505.1"
                     /translation="MRIQQLYYIIKIAETGSMNEAAKQLFITQPSLSNAVRDLEKEMN
                     IKIFLRNSKGITLTKDGMEFLSYARQIVEQTELLEDRYKNPNAKRQLFSVSSQHYAFV
                     VNAFVSLLKETEMEDYELFLRETRTWEIIDDVKNFRSEIGVLFLNHFNRDVLLKLLDD
                     NRLSYTTLFTAKPHVFVSKTNPLAQRKSITLDDLVDFPYLSYEQGIHNSFYFAEEILA
                     QEHHKKSIVVSDRATLFNLLIGLDGYTIATGILNSNLNGDNIVSIPLEFDDEIELVYI
                     QHEKALLSDMGEK"
     gene            1043..1855
                     /locus_tag="AC1PJC_000479"
     CDS             1043..1855
                     /locus_tag="AC1PJC_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002917172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase electron transfer
                     subunit"
                     /protein_id="HIP6619506.1"
                     /translation="MFSVSLLYRIGEKMILKEQMLLVDQVQLAPRIFAMTLQGDMVQD
                     MKMGQFIHIRVPDDSMLLRRPISISEIDRNKSQCRIIYRVEGQGTEVFSKMTVGQYLD
                     VMGPLGKGFEVDFLKEGDRILIIGGGIGVPPLVEVAKQAANRGVNVTSVIGFATKEAV
                     ILEEELASYGVVYVTTDDGSYGRKGNVATVVEELTNEFAAIYSCGAPAMMNYVDQRFQ
                     EHPHAYISLEARMACGMGACYACVVKPKEGQEHENKRVCKEGPVFATGSLIL"
     gene            1865..2806
                     /locus_tag="AC1PJC_000480"
     CDS             1865..2806
                     /locus_tag="AC1PJC_000480"
                     /EC_number="1.3.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HIP6619507.1"
                     /translation="MIKRLAISLPGLDLKNPIIPASGCFGFGPEYADYYDLNQLGSIM
                     IKATTRHPRYGNATPRVAETPAGMLNAIGLQNPGVDVVLSEKLPWLEQHFPDLPIIAN
                     VAGFSNEEYAYVSGKISKAPNVKAIELNISCPNVDHGNNGLLIGQVPELAYQAVKAAV
                     EASSVPVYVKLTPSVADITLLAKAAEDAGATGLTMINTLVGMRFNLKTRQPILANGTG
                     GMSGPAVFPVALKLIRQVAQVTDLPIIGMGGVDTADKALEMMVAGASAIGVGTANFTD
                     PFACPKIIQDLPKRMEVYGIDSLEGLRREIRHSLGKR"
     gene            2971..3666
                     /gene="pyrF"
                     /locus_tag="AC1PJC_000481"
     CDS             2971..3666
                     /gene="pyrF"
                     /locus_tag="AC1PJC_000481"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HIP6619508.1"
                     /translation="MKETRPIIALDFAGKEEVQSFLEQFPPDEKLYVKVGMELYYAEG
                     PGTINYLKDCGHSIFLDLKLHDIPNTVESAMKVLAKLGVDMTNVHAAGGVEMMRAARR
                     GLGEDAVLIAVTQLTSTSEEQMRTDQNIQTSLQEAVVHYAQRAQEAGLDGVVCSAHEV
                     ALIKDATSSDFVCLTPGIRPTGGEVGDQKRVMTPADAARIGSDYIVVGRPITKSEHPY
                     QTYLSIKEEWNRG"
     gene            3659..3985
                     /locus_tag="AC1PJC_000482"
     CDS             3659..3985
                     /locus_tag="AC1PJC_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HIP6619509.1"
                     /translation="MDKVYQVIIDRPIGYIDKFGNQYPINYGYVPNLLAGDGEEQDVY
                     IISKAVRKPLTAFEGKLVAIIHRRDDVEDKWVLTGLDEKLTVTEIKEKTNFIEQYFDS
                     WIEMVD"
     gene            4123..4755
                     /gene="pyrE"
                     /locus_tag="AC1PJC_000483"
     CDS             4123..4755
                     /gene="pyrE"
                     /locus_tag="AC1PJC_000483"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HIP6619510.1"
                     /translation="MTLATEIASHLLDIKAVHLRPEKPFTWASGIKSPIYTDNRITLS
                     YPETRNLIEDGFVQRIEEEFPEVEVIAGTATAGIPHGAIIADRMNLPFAYIRSKPKDH
                     GAGNQLEGRIVKGQKMVVVEDLISTGGSVLDAVAAAEREGADVIGVVAIFTYELPKAD
                     RNFDNAGVKLVTLSNYSELIKVAKVQGYINADGLNLLKKFRQNQETWQED"
     gene            4864..5790
                     /locus_tag="AC1PJC_000484"
     CDS             4864..5790
                     /locus_tag="AC1PJC_000484"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HIP6619511.1"
                     /translation="MISVIVPCFNEEEAIPYFYDAMEKVRKEMGEQFEYIFVNDGSKD
                     RTLTVLRQLSGQDRAVRYLSFSRNFGKEAALYAGLQAAQGELVTVMDVDLQDPPEMLM
                     EMKAMLDGNPDLDCVGTRRVSRDGEPPIRSFFAKLFYKLMNKISQVEVVDGARDFRLM
                     RRHMVDAILSVSEYNRFSKGIFAWVGFETEYLPYENVERVAGETSWSFWKLLSYSIEG
                     IINFSDTPLNIASYTGFFTFLLSLVLMVFVVFKTLVIGDPTIGWPSTICIILFWGGLQ
                     LMTIGILGKYLAKVFLETKKRPIYIVKEKSSN"
     gene            5800..6453
                     /locus_tag="AC1PJC_000485"
     CDS             5800..6453
                     /locus_tag="AC1PJC_000485"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001841111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HIP6619512.1"
                     /translation="MEHSAWHELIKAQLPEHYFGKINQFLDHVYAGGTIYPPREKVFA
                     AIQTTDLEEVRVVILGQDPYHGPGQAQGLSFSVPNSVPAPPSLQNILKELTDDIGVKQ
                     DHDLTAWAEQGVLLLNACLTVPAGQANGHAGQIWEPFTDAVIKVVNSLDQPVVYILWG
                     AYARKKKALITNPKHLVIESAHPSPLSAYRGFFGSKPFSQANAYLTSQGRTGIDWLR"
     gene            6493..7764
                     /locus_tag="AC1PJC_000486"
     CDS             6493..7764
                     /locus_tag="AC1PJC_000486"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HIP6619513.1"
                     /translation="MLLVKNGRVLDPQSGLDKVCDILMDGSKIVKIAESISEDVEQEV
                     IDATGLVVAPGLVDVHVHFREPGQTHKEDIHTGALSAAAGGFTSVVMMANTNPTISNV
                     ETLKEVLDSAKKEAIHIYSVATITDHFDGQNLTDFPALLEAGAVAFSDDGIPLTNAGV
                     VRKAMKLAKEQGCLISLHEEDPDLNGVLGLNEQVAEKHFHVCGATGVAEYSMIARDVM
                     IAYETGARVHIQHLSKAESVKVVEFVQGLGANVTAEVAPQHFSRTEDLLLTKGANAKM
                     NPPLRLESDCLAVIDGLKSGVISVIATDHAPHHADEKNVEDLTQAPSGMTGLETSLSL
                     GLTHLVEEGHLTLVQLLEKMTINPAKLYGLDVGYLAENGPADLVIFDPNANRLVTADF
                     ASKSANSPFVGDSLKGQVLYTIANGQIVFGK"
     gene            7895..10009
                     /gene="nt5e"
                     /locus_tag="AC1PJC_000487"
     CDS             7895..10009
                     /gene="nt5e"
                     /locus_tag="AC1PJC_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002906496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell surface ecto-5'-nucleotidase Nt5e"
                     /protein_id="HIP6619514.1"
                     /translation="MKKKKILLPVMSTLLLAPFVLAQQVQAAETTTAATTTNQPATTD
                     ATATVPATSVENVATEETVVPAAEETVEAVIIHTNDVHGRILEEKNVIGDAKAAAVIE
                     EERAKVENTIVVDAGDAFQGLPISNSTKGEDRANIMNQVGYDAMAVGNHEFDFGMDQA
                     IKYKETLNFPLLSANTYVNGARVFEASTIVDKTPTVVGDEFVVIGVTTPETATKTHPK
                     NVEGVTFADPVTEVNKVIDEVEARALADNRVYKNYIILAHLGVDSTTPVEWRGSTLAE
                     ALSKNSKLAGKRVIVIDGHSHTVEATTYGDNVTYNQTGSYLNNIGKVTLKSDKLLGEA
                     SLISAADTKNVTPNAKIAALVDEIKAKYEAENAQVVIENNPVELNGDRSNVRVRETNL
                     GNAVTDAIYAYGQTGFSNKTSLAVTNGGGLRATIAKDQPVTKGDIIAVLPFGNIVSQI
                     TVTGQQIYDMFTKSLSSTLQVNPETGEMLLDENGMPLFEASGGFLHISGANVFYDPTL
                     PVEERVLLIGILNPETGEYDALDLEKTYYLATNDFLAAGGDGYTMLGGAREEGPSMDS
                     VFAEYLKTADLSAYEVVNPYSRIIPVNSSIDTDEDGYPDFIEILLDTDPENPASNPET
                     VPAENTDSPSNQVQNTSATDKKAPVDSPKVGDKKPEVASPVKTTKAGVLPNTGDQMNL
                     TLSLFGLGLAGLAMAVGRRKEN"
     gene            10061..10708
                     /locus_tag="AC1PJC_000488"
     CDS             10061..10708
                     /locus_tag="AC1PJC_000488"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009146 - purine nucleoside triphosphate
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HIP6619515.1"
                     /translation="MQTVFQYQKEGDREQISSYVLLSNSPRRKQLLGFLQPQIASVEV
                     DERGIEEHFMKQFATDDFLTRAAKTCCEISKAKSDMDLVTGHLYISADTIVVSDGQIF
                     NKPQDLTEAETMLRSYFGKSHHVVTSVCLRTRHSLDVFYTVAQIDFVDYYPALEEVIQ
                     SYIREKQPLDKAGAYGIQELDPRFVSGISGDIHTIIGLPVAEVSRRIFSEEGFEK"
     gene            10760..11248
                     /locus_tag="AC1PJC_000489"
     CDS             10760..11248
                     /locus_tag="AC1PJC_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HIP6619516.1"
                     /translation="MTVDIERYKQLAQQKQGEHRKFLANLKKKAPKNLDRIVQDIHAE
                     VFSEIDCTECANCCKTLGPLFTEADITRIAKHLRMKLPVFEDMYLRMDEDGDKVFQSM
                     PCPFLGGDNLCSIYDARPKACREFPHTDRKKIYQINNLTIKNTLICPAAYLFVEKLRE
                     RI"
     gene            11348..12199
                     /gene="ylqF"
                     /locus_tag="AC1PJC_000490"
     CDS             11348..12199
                     /gene="ylqF"
                     /locus_tag="AC1PJC_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002962311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HIP6619517.1"
                     /translation="MATIQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPM
                     LTKIVGDKPKLMILNKVDLADPVRTKEWQIYFEGQGIRTLAINSKEQATVKKVTDAAK
                     SLMKEKIERLRERGIQKETLRTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQ
                     WLKSNKDLEILDTPGILWPKFEDQEVGLKLALTGAIKDQLLPMDEVTIFGLDYFKANY
                     PERLEERFKGMDLEQETPELIMDWTKKLGFRDDYDRFYNLFVKDVRDGRLGTYTLDRV
                     SDLDGND"
     gene            12186..12959
                     /locus_tag="AC1PJC_000491"
     CDS             12186..12959
                     /locus_tag="AC1PJC_000491"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HIP6619518.1"
                     /translation="MATIKEVTALLAQVDNLDSPVWADLAQDERAGVQTAIKKRQKEL
                     EKEAAEDARLEAMLCYEKALYENGVELIAGIDEVGRGPLAGPVVAAAVILPKGCKIRY
                     LNDSKKIPKSKHEAIYQEVMERAVAVGVGIKDAAVIDQVNIYEATKLAMLEALGQLSQ
                     EPEHLLIDAMKLDTPIPQTSIIKGDANSLSIAAASIVAKVTRDKMMADYDKEFSGYGF
                     AKNAGYGTAEHLEGLNKLGITPIHRKTFEPIKSMVAGGN"
     gene            12962..13972
                     /locus_tag="AC1PJC_000492"
     CDS             12962..13972
                     /locus_tag="AC1PJC_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015445222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HIP6619519.1"
                     /translation="MTVFFWLFLAAIGLFALVYFWERRSIFISLFALNILVWALAWII
                     STGILENNEILRLLAIAVAMVLFLALLSGPFVLLFTLYLNGFQILKREGVRFHNFLSM
                     GLAVALTFYLFIAPFVVQSLSAISFFNMVFVYVGFLVSYAIIISMLYTTSSFVNLVNL
                     FPGKLDYVVVLGAGLIGDKVTPLLASRIDKGIAIYQKQPGSKLIMSGGQGPDELIAEG
                     QAMANYALEKGVPAEDILIENQSTNTEENLKFSYALMKPGSRFALVTNYYHVFRALLL
                     ARQLKIKCIGYGAKTRFYFSLNAFIREFVGYVVMSRKTHLVFLSIVSALYLIGVIISL
                     MH"
     gene            complement(14005..14655)
                     /gene="trhA"
                     /locus_tag="AC1PJC_000493"
     CDS             complement(14005..14655)
                     /gene="trhA"
                     /locus_tag="AC1PJC_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002286719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0019835 - cytolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAQR family membrane homeostasis protein TrhA"
                     /protein_id="HIP6619520.1"
                     /translation="MNPSLKLSLQLSFGEEVANSVTHAVGALLMLVLLPITAIHSYQD
                     YNLTAVIGMSIFVISLFLMFLSSSIYHSMPYASTHKYILRIIDHSMIYIAIAGSYTPV
                     ALSLVGGWLGYLIVGLQWGLTIFGILYKIFAKKINEKFSLFLYLFMGWLVVFILPAIL
                     QKTEMAFGILMLAGGLSYTIGALFYAKKKPYFHMIWHLFILLASALQYIAIVYFML"
     gene            complement(14645..15091)
                     /locus_tag="AC1PJC_000494"
     CDS             complement(14645..15091)
                     /locus_tag="AC1PJC_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1836 domain-containing protein"
                     /protein_id="HIP6619521.1"
                     /translation="MKQTIPYWHELPDLDLYLDQVLLYVNQTTTSSELLEQKSLTASM
                     INNYVKHKQLEKPVKKKYQKQQVARLIALTILKNVFSIQEISQTLNLLLQSSHSETLY
                     NHFVDCMRNEESDETPEIIRYACKSVKLYYKTRQLTMELERSHHES"
     gene            complement(15187..15498)
                     /locus_tag="AC1PJC_000495"
     CDS             complement(15187..15498)
                     /locus_tag="AC1PJC_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HIP6619522.1"
                     /translation="MLENQEQTLTLSAAELLDLMQTESVQLLDVRDPEEYSAGHIDGA
                     INCPMDKIAALDGPVDQHYLLICKSGKRSKLAREIMYSKGYKANDIAGGMDAWDGLIV
                     K"
     gene            15628..16185
                     /locus_tag="AC1PJC_000496"
     CDS             15628..16185
                     /locus_tag="AC1PJC_000496"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016407 - acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar O-acetyltransferase"
                     /protein_id="HIP6619523.1"
                     /translation="MPTEKEKMIAGQFYMAADPELRQMRTLARQKMQDFNNELDGSIR
                     SQILKNWFGATGERIYMEPNFYCDYGSNIHVGEDFYANFNCTMLDVCPIRIGKNAMLG
                     PNVQLLTPLHPLDPDERNSGLEYGSPITIGDNFWAGGGVTILPGVTLGNNVVVGAGSV
                     VTKSFGDNVVLAGNPARVIKEIPKK"
     gene            16244..17086
                     /gene="dprA"
                     /locus_tag="AC1PJC_000497"
     CDS             16244..17086
                     /gene="dprA"
                     /locus_tag="AC1PJC_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HIP6619524.1"
                     /translation="MNNFELFKWKKAGLTNLNVNKVLAYQDLHGKKLTLRNVAVVSEC
                     KNPVLFMENYKNLDTKACREEFNKYPSFSILDDVYPLALKQIYNPPVLLFYQGDLELL
                     EKSKLAVVGTRNASKNGIQSVQKIIKELSNRFVIVSGLARGIDTAAHIASLKNGGQTI
                     AVIGTGLDNIYPKENKDLQTYIGKHHLVLTEYEPGADPLKYHFPERNRIIAGLVEGLV
                     VCEAKMRSGSLITCERALEEGREVYAIPGSIMDGKSDGCHHLIQEGAKCVTSGLDIIS
                     EYQF"
     gene            17179..19272
                     /gene="topA"
                     /locus_tag="AC1PJC_000498"
     CDS             17179..19272
                     /gene="topA"
                     /locus_tag="AC1PJC_000498"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005591982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HIP6619525.1"
                     /translation="MATKTVSKKKTTTKKNLVIVESPAKAKTIEKYLGKNYKVVASVG
                     HIRDLKKSSMSIDFDNNYAPEYINIRGKGPLINSLKKEAKNAKQVFLASDPDREGEAI
                     SWHLAHILGLDANDKNRVVFNEITKDAVKNAFQEPRAINLDLVDAQQARRVLDRIVGY
                     SISPILWKKVKKGLSAGRVQSVALKLIIDRENEISNFKPEEYWTIDATFKKGTKKFQA
                     SFYGLDGKKVKVENNEQVKEILARLNSDDFLVEQVERKERKRNAPLPYTTSTMQMDAA
                     NKINFRTRKTMMVAQQLYEGVSLGTGGTQGLITYMRTDSTRISPVAQAQAADFITERF
                     GATYSKHGNKVKNASGAQDAHEAIRPSNVNLTPESIAKYLDKDQLRLYTLIWNRFVAS
                     QMAAAVFDTMSVRLGQNGIVFAANGSQVKFDGYMAVYNDADKNKMLPDMEQGDTVVRA
                     STNPEQHFTQPPARYSEATLIKTLEENGVGRPSTYAPTIETIQKRYYVKLAAKRFEPT
                     ELGEIVNKLIVEFFPDIVNVKFTADMEQKLDDVEIGKEQWQKVIDGFYQPFKVELSKA
                     EEQMEKIQIKDEPAGFDCDVCGHEMVIKLGRFGKFYACSNFPDCRNTKQITKEIGVTC
                     PVCQKGQVIERKSKRNRLFYGCDRYPECEFTSWDKPVGRSCPKCDHYLVEKKVRGGGK
                     QVVCPNGDYEEDKIK"
     misc_feature    19680..19814
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:15.0:RF00557"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="ribosomal protein L10 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00557"
     gene            19841..20335
                     /gene="rplJ"
                     /locus_tag="AC1PJC_000499"
     CDS             19841..20335
                     /gene="rplJ"
                     /locus_tag="AC1PJC_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001287276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HIP6619526.1"
                     /translation="MSEAIIAKKAELVNAVAEQMKAATSIVVVDARGLTVEQDTVLRR
                     NLRGAEVEYKVIKNSILRRAAEQAGLEGLAELFVGPSAVAFSNDAVAPAKTIYDFAKT
                     ADALEIKGGAVEGKVSSKEEIEALATLPNREGMLSMLLSVLQAPVRNVAYAVKAVAEK
                     EDAA"
     gene            20401..20766
                     /gene="rplL"
                     /locus_tag="AC1PJC_000500"
     CDS             20401..20766
                     /gene="rplL"
                     /locus_tag="AC1PJC_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018371186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HIP6619527.1"
                     /translation="MALNIENIIAEIKEATILELNDLVKAIEEEFGVTAAAPVAVAAA
                     GGAAEEAKDSFDVELTSAGDKKVGVIKVVREITGLGLKEAKELVDGAPAMVKEGVATA
                     EAEEIKAKLEEAGASVTLK"
     gene            20891..21640
                     /locus_tag="AC1PJC_000501"
     CDS             20891..21640
                     /locus_tag="AC1PJC_000501"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HIP6619528.1"
                     /translation="MKSYKNYIFDFYGTLVDIRTDENKLEVWNQLTQIYNAFGCSYRP
                     RQLKNAYHRFVEEAERFLAETVSYQYVEIDLETIFIRLLTDAPNENQSTNKPTDLETF
                     GQVVATIFRVLSREKLEAYENTLTSLQTLKDREVRLFILSNAQRIFTQAEIEQTGCAD
                     LMEKIYISSDFKMKKPEPAFLQLVLEENNLDVEETVMVGNDLTSDIAIAHELGMDSIL
                     LNTFPYSQEEIDSYRRLGWNFEVVGDIAELL"
     gene            21836..23170
                     /gene="trmFO"
                     /locus_tag="AC1PJC_000502"
     CDS             21836..23170
                     /gene="trmFO"
                     /locus_tag="AC1PJC_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000083753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate--tRNA-(uracil(54)-
                     C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO"
                     /protein_id="HIP6619529.1"
                     /translation="MSQTHINVIGAGLAGSEAAYQIAKRDIPVKLYEMRGVKPTPQHK
                     TDKFAELVCSNSFRGDSLTNAVGLLKEEMRRLDSIIMRAGEAHRVPAGGAMAMDRENF
                     SQAVTDEIHNHPLIEVIRGEITEIPDDAITVIATGPLTSDALAEKIHALNGGDGFYFY
                     DAAAPIVDSSTINMDLVYLKSRYDKGEAAYLNAPMNKEQFNAFYEALISAEEAPLNSF
                     EKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPEDYKGPRDGEYKTPYAVVQLRQ
                     DNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQT
                     FATKKNPNLFFAGQMTGVEGYVESAASGLVAGINAVRRFRGEEPVIFPQTTAIGALPF
                     YITHTESKHFQPMNVNFGIIKELDGPRIRDKKERYEAIAERSLKDLEEFLTY"
     gene            23247..24251
                     /locus_tag="AC1PJC_000503"
     CDS             23247..24251
                     /locus_tag="AC1PJC_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0036297 - interstrand cross-link repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA glycosylase AlkZ-like family protein"
                     /protein_id="HIP6619530.1"
                     /translation="MHHDTWKGIILQKQGLLEPQSVQQICQNLNGLQAQFQPYVHVGF
                     RNRMTAEDFHEGSWQEELTRQWSIRRTVHAYLKSEIPLYIHEGRLASTDYLKTEGRDG
                     FSPQTKQKYHQLILEALEQGPMTREDLKVLCRGEKMTQEEEKLVFNAWGGLFRYMVER
                     GEVYQEYGAKRFHRLTDFQPLSREKAELEIARRYFAGFGPVSLADARYYFKENKSTVL
                     NWMKQLDLKTVEVAGEERFYLGELEEAELPDCLFVAGFDQLLLGYEKKANPFFNPKYI
                     RNIYTLTGIVKPVVFYKGRFVATWKRDKGTILLDIFEDITQQEEKELDHYRQMYEKIL
                     "
     gene            24365..25192
                     /locus_tag="AC1PJC_000504"
     CDS             24365..25192
                     /locus_tag="AC1PJC_000504"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HIP6619531.1"
                     /translation="MNKSYFYLDMRTHELDVPFTGRKRRVRVLLPKGYAENTEETYPV
                     VYFHDGQNVLYSKEAFSGHSWKVIPTIKRNPDIAKMIVVAIDNDGADRMHEYAAWKFS
                     EMGIPGVQFGGKGTLYAEFVMDVVKPFIDQEYRTKSDKVHTAMIGSSLGGNITQFMGL
                     AYQNQIGCLGVFSSANWLHQDAFDRYIERQQLDSEQRVYIYVGTEEADDTDKTLMAGN
                     IKQAYINSSLTYYRQLIAGGVDLDNIALEVVSGAVHNEEAWALYLPACLRFLSEHWS"
     gene            25223..25969
                     /locus_tag="AC1PJC_000505"
     CDS             25223..25969
                     /locus_tag="AC1PJC_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002909732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HIP6619532.1"
                     /translation="MHVEFLSHWSGNLGREMNLNRYGHAGIPVVVFASSGGSYNEYAD
                     FGMIEACRGSIEAGQVQFFTLTSYDSESWLADWKSIHDKAEAHRAYERYVIEEAIPFI
                     KHKTGWFDGMMTTGCSMGAYHALNFFLQHPDVFTKVIALSGVYDARFFNNNHDYGHDD
                     AVYQNSPSDYIWNQNDGWFIDKYRQADIIVCTGLGDWEQDGLDSFYNLKRAFEEKNIP
                     AWFDTWGTDVAHDWVWWRKQMPFFLHSIGL"
     gene            25987..27153
                     /locus_tag="AC1PJC_000506"
     CDS             25987..27153
                     /locus_tag="AC1PJC_000506"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HIP6619533.1"
                     /translation="MNYLVISPFYPENFQPFTIELAKKEGVTVLGIGQEPYDQLPEEL
                     RNALTEYFRVENLENLDEVKRAAAFLIYKHGPIDRVESHNEHWLENDAALREQFNIFG
                     AKPKHLKKTKFKSEMKKYFKKAGVPVVPGVVVKSERDFGRALKNVGFPMIAKPDNGVG
                     ASGTFKIENKEDFDRFVETWDGATIYFLEKFVNSSIITTYDGLLDHEGNVVFETGLTY
                     VHTPLELMLSRKDNAYFIEKELDPQLVKYGRAIIKAFGMRERFFHIEFFKDGDDYIAI
                     EYNNRMAGGFTVEAYNYAHSIDLFRDYANVATGGTVEERRFEPQYCLVATRRDTTEYV
                     HSADDIHQKFAGKIKTVKRMPDAFAELQGNDAYLLVTESKKELDEMIAYIGLTK"
     gene            27292..27432
                     /locus_tag="AC1PJC_000507"
     CDS             27292..27432
                     /locus_tag="AC1PJC_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619534.1"
                     /translation="MSFKFLQAKRIEEKVFSEKEKAELMEQALFLEDLAHNLQSMRFM
                     AY"
     gene            27445..27834
                     /locus_tag="AC1PJC_000508"
     CDS             27445..27834
                     /locus_tag="AC1PJC_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NisI/SpaI family lantibiotic immunity
                     lipoprotein"
                     /protein_id="HIP6619535.1"
                     /translation="MKKKVISMLALGSIILTACSSSSAGLSFDEGYQTFHYKGKVYAV
                     SKQEVAEDSIQGTEVQFMEWPVVKEEGAVKKTVSLNNLYVTTNKEWAIGVQDGYYKVD
                     LEENVAESDRIDYQALLDTVDLSKENN"
     gene            27843..28595
                     /locus_tag="AC1PJC_000509"
     CDS             27843..28595
                     /locus_tag="AC1PJC_000509"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017650232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6619536.1"
                     /translation="MLLEINHLEKVYRTRFSKEETRALQDVDFKVEEGEFIAIMGESG
                     SGKTTLLNILATLDKPTRGSVILNNQDITKIKESKLADFRLRNLGFVFQDFNLLDTLS
                     IQDNIFLPLVLARTSYEEMEKRLKVLAPKLRIQDLLKKRPFELSGGQKQRVAIARSLI
                     TRPQIVLADEPTAALDYRNSEDLLNLFEDINLDGQTILMVTHSANAASHAKRVLFIKD
                     GRIFHQLYKAGKSNQDFAKEISLNMSALLGGE"
     gene            28596..30542
                     /locus_tag="AC1PJC_000510"
     CDS             28596..30542
                     /locus_tag="AC1PJC_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HIP6619537.1"
                     /translation="MFYLKLAGQNIRKSMGVFAPFVLASLVLFTLICSMFLLMLSPVM
                     KTMGTGAVSIGLGVVVLTIFSLIMEIYSFNFLMQQRTREFGLYNMLGMNKKKVALVAS
                     IELFFIFLLVIVLGSALAGVFANVLYLIFVNLTNYSDLHFNISPLAFAMTAFLFAGIF
                     FILELLAIRTIGKTSPLILFRASEKGEKEPRGNLLLAALGVLSLGVGYYLSLSSKAAG
                     VGVIYRFFIAVLFVVAGTYLFYISFMTWYLKARRKNKRYFYTPEHFITTSQMIFRMKQ
                     HATGLANITLLAVMAFVTIATTTSLYTGMSSMTGALYPKETSITYPVSDRSQGEAAYQ
                     QSVLSHFPEKSENSLTYLTYQAGLVYDGGSEIVISPENISNPDFSKMAFTYFITQDDF
                     RKLGNDLPELAANQVAFMRPSEKPSLKKLVLGGQTFENVANLDQAIFPDITNTLNAAV
                     MVVSDDSVLETIRSYFEANNPQGYQVSLDYRVFTDLTDEELVTAGILNENGEYLGNVM
                     QRTDFNNMLMGFTGGFLFTGFLLGISFLLGAALIIYYKQYSEGYEDKKSYKILQEVGM
                     SQQAVKKTINSQTLLVFFMPLAMATLHFVVALVMLKQMLMMFGVVSSSMIYTVSGITL
                     LAVALIYFIIYKWTSRTYYRIIER"
     gene            30633..30884
                     /gene="relB"
                     /locus_tag="AC1PJC_000511"
     CDS             30633..30884
                     /gene="relB"
                     /locus_tag="AC1PJC_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelB family
                     antitoxin"
                     /protein_id="HIP6619538.1"
                     /translation="MAAITLKVSEQDKLFMQAMAKFEGVSLSELIRTKTLEALEDEYD
                     ARVADIALAEYEADLANGIEPISWEEMLEDLGLTDEDQL"
     gene            30868..31134
                     /locus_tag="AC1PJC_000512"
     CDS             30868..31134
                     /locus_tag="AC1PJC_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA];
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE family
                     toxin"
                     /protein_id="HIP6619539.1"
                     /translation="MKTSYKLVPTGRFIKQLKKLDKFTQKQITNYLSSHVTDNPRQYG
                     KALTANRSGQWRYRIGNYRVIVSIEDDKLIVTALEVGHRKEIYK"
     gene            31173..31841
                     /locus_tag="AC1PJC_000513"
     CDS             31173..31841
                     /locus_tag="AC1PJC_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002274458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HIP6619540.1"
                     /translation="MMKKEKIYIVEDDEMIVQLLKQHLGKSYQVESVQNFRAVSQEVA
                     EIKPDLVLMDISLPYYNGFYWTTEIRKTMTMPIIFISSSDDEMNAVMAMNMGGDDFVS
                     KPFSLGILDAKIGAFLRRVNQFSKSTDLSIDQFQLSLDGRFTNESEQVQLSPTETKIL
                     SALLERQGQIVSKEELLEKLWENEEFIDQNTLNVNMTRLRKKVSEVGFERIHTVRGVG
                     YLVK"
     gene            31838..32779
                     /locus_tag="AC1PJC_000514"
     CDS             31838..32779
                     /locus_tag="AC1PJC_000514"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HIP6619541.1"
                     /translation="MIAKFIREYRSFYFSYIVLATSFILLFFLYQLPTEFLQNALLLS
                     LTFLILLTAGLFWKFRNRMRALEDYVHEEALPLLNKPVDLAYLNLIEAEKEATREQLL
                     VYKSREEDLQAMVKMWSHQMKVPLAALSLMSQTDNLNQQDVNHQLLRLDNYMANLLNY
                     LKLTNHASDFRFEQVEVREVVVDLVKKYRNQFLQKDISVTIDGNWLLKTDRKWISFAI
                     SQIIDNALKYNKSGGKVTIELNEGISISDTGIGILAEDIPRLFDEGFTGFNGREHQKA
                     TGFGLYLTKRVLYQLELAISVESQLDVGTTVSITKVQ"
     gene            32960..34468
                     /locus_tag="AC1PJC_000515"
     CDS             32960..34468
                     /locus_tag="AC1PJC_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HIP6619542.1"
                     /translation="MSHHHVLQNGSDIRGIAIATDEYAVNLTPQATKEVVRGLIHWLT
                     QKPELAQAYQNGQLTIGIGRDSRLSGPDLVSAFTEEAVRLGVQLIDFGMATTPALFMS
                     TQYPQFKCHAGVMITASHLPYYFNGIKIFSENGGAEHEDIDFILSHSEDLPASSLGSI
                     TSADLITPYAQDLVGKIRTACGGQEKPLTGLNIIVDAGNGAGGFFAEKVLAELGADTT
                     GSQFLDPDGTFPNHVPNPDNKEAMESIRQAVLKQGADLGIIFDTDVDRAALVTKSGEI
                     LNRNNLIAVLSQIVLAEHPGTSIVTNSPTTEHLKVFIESLGGKQIRYISGYRNVINRA
                     ILANQEGVDCQLAIETSGHAAFKENYFLDDGTYVAAKILMLLPKLQAEGKSLDDLIAQ
                     LKQPLETQEVRFKLEVADYRALGEQVIADLRQTTIQGFAFNPENEEGVRFDLTEPYGD
                     GWFLLRMSLHEPLLVLQVENDQTGHIPVVLRTLSAFLDQYPAVNQEKLKELI"
     gene            complement(34537..35607)
                     /gene="xerS"
                     /locus_tag="AC1PJC_000516"
     CDS             complement(34537..35607)
                     /gene="xerS"
                     /locus_tag="AC1PJC_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012658412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerS"
                     /protein_id="HIP6619543.1"
                     /translation="MRRELLLEKIDQLKEIMPWYVLEYYQSKLSVPYSFTTLYEYLKE
                     YRRFFEWLQDSDLVAVERIADIPLDVLEHLTKKDMESFILYLRERPLLNANTTQNGVS
                     QTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
                     LFLGNETMEFLDYVDKEYQVKLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLD
                     LRDVNLNMMMIEVTRKGGKRDSVNVAGFAKPYLEAYMSIRQQRYKAEKTDTAFFLSEY
                     RGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDATKSQVLVSHQLGHAN
                     TQVTDLYTHIVNDEQKNALDQL"
BASE COUNT        10474 a         6899 c         8179 g        10070 t
ORIGIN      
        1 atttttctcc catgtcggac agcaatgcct tttcgtgttg aatatagacc aattcgattt
       61 catcatcaaa ttccagagga attgatacaa tattatctcc gttaaggttt gaattgagga
      121 tacctgttgc gattgtatag ccatctagac caattaagag attgaagagt gtggcacggt
      181 cagatacgac aatcgatttt ttatggtgtt cctgggctag aatttcttct gcaaagtaga
      241 aggagttgtg aataccttgc tcgtagctga gataggggaa atctaccaaa tcatcgagag
      301 tgattgactt tctttgtgcc aaaggattgg ttttgctgac aaatacatgt ggtttggcag
      361 tgaagagagt tgtataggat agtcgattgt catccaaaag tttcagcaga acatcacggt
      421 tgaaatggtt gaggaaaagc actccgattt ctgagcggaa attcttaacg tcatcaatga
      481 tttcccaggt ccgtgtttca cgcaagaata gttcgtaatc ctccatttca gtctctttca
      541 agagcgagac aaaggcgttg acgacaaagg catagtgttg agaagagacg ctaaatagtt
      601 ggcgttttgc attaggattt ttatagcgat cttctaaaag ttctgtctgt tcaacaattt
      661 gacgggcata ggaaagaaac tccattccat cctttgtaag agtaatacct ttggaatttc
      721 taagaaaaat cttaatattc atctcttttt ccaggtctcg tacagcgttg gaaaggctgg
      781 gttgggtaat gaagagttgt ttggcagcct cattcatact gcctgtttct gcaattttga
      841 taatatagta taattgttgg attctcatac ctctattgta acatgatttg acaaattatt
      901 ctaaaaaatg tataatgctg aaaatatatc ctttaactga gtccagagag gcgaagaagg
      961 gaacgtgata aatagggcaa atactgcctt cttttcgtgt aaccttgcta gccagcaagg
     1021 ttttttctct atatcgactt tcttgttttc tgtgtcattg ttatatagaa taggagaaaa
     1081 gatgatttta aaagaacaga tgttactggt ggaccaagtc caactagcgc cacgaatttt
     1141 tgctatgacc ttgcagggtg atatggtcca agatatgaaa atggggcaat ttatccatat
     1201 tcgtgtgccg gatgattcca tgctcttgcg gagaccgatt tctatttccg agattgatcg
     1261 aaataagtct caatgtcgga ttatttaccg agtggaaggt caagggacgg aagtcttttc
     1321 gaaaatgact gttgggcagt atttggatgt tatgggaccg cttgggaaag ggtttgaagt
     1381 agactttctc aaagaaggtg accgcattct catcattggc ggaggaatcg gtgttccgcc
     1441 cttggtggaa gtggcgaaac aggcggcgaa ccgtggtgtc aatgtcacgt cagtcattgg
     1501 ctttgccacc aaagaggctg tcattttgga agaggagctg gcaagttatg gggtggtcta
     1561 tgttacaaca gatgatggtt cctatgggcg taaggggaat gtcgcaacgg tcgttgaaga
     1621 gctgacaaac gagtttgcag ccatttactc atgtggggcg ccagctatga tgaactatgt
     1681 tgaccaacgc tttcaggaac atcctcatgc ctacatttca ctggaggcta ggatggcttg
     1741 cgggatgggg gcgtgctatg cctgtgttgt caaacccaaa gagggacaag aacacgagaa
     1801 caagcgtgtc tgcaaggaag gtccagtctt tgcgactggt agtctgattt tataggaggt
     1861 tgatatgata aaacgattag cgatttcctt accaggcttg gacttgaaaa atcccatcat
     1921 tccagcctct ggctgcttcg gttttggtcc ggagtatgca gattattatg accttaacca
     1981 gcttggctcc attatgatta aggcgactac ccgtcatcct cgttatggca atgcgactcc
     2041 ccgtgtagcc gagacaccag caggtatgct caatgccatt ggacttcaaa atccgggtgt
     2101 tgatgtagtc ttatccgaaa aactcccctg gttagagcaa catttcccag acttgccaat
     2161 cattgccaat gtagctggct tttccaatga ggaatatgcc tatgtatcag ggaaaatttc
     2221 aaaagctcct aatgtaaaag caattgaact aaatatttcc tgtcccaatg tggaccatgg
     2281 aaacaatggt ctcttgattg ggcaggtgcc agaattagcc tatcaagcag taaaagcagc
     2341 agtcgaagcc tcatctgtac ctgtttacgt taagctgaca ccaagtgtgg cagacataac
     2401 cctgttggcc aaggctgctg aggatgctgg agcgactggc ttgacgatga taaatacctt
     2461 ggttggtatg cgattcaatc tcaaaactcg acaaccaatc ttagcaaatg gtacaggagg
     2521 aatgtcaggt ccagcagttt ttccggttgc tctcaaactc attcgtcagg ttgctcaggt
     2581 gactgattta ccgattattg gtatgggtgg tgtggatacg gcggacaagg ctctagagat
     2641 gatggttgca ggagcttcag ccattggggt aggaacagcc aactttacag acccatttgc
     2701 ttgtccaaag attattcaag acttgccgaa acgcatggaa gtttatggta ttgatagttt
     2761 ggaaggttta cgccgagaaa ttagacatag cttgggtaag cgttgacaaa ggtaaaataa
     2821 aagagtaata taaagaaaat atctccttta actaagtcca gagaggctag gaaggtgtca
     2881 tgtaatatgc ttgaaaggtg attttcaagc tgaattcgtg cacatccctg accgatttgg
     2941 cagggatttt tgtgtaaatg aaaggatttt atgaaagaaa caagaccaat tattgccctt
     3001 gactttgcag gtaaagaaga agttcagtct tttctggaac agttcccacc agatgagaaa
     3061 ctctatgtaa aggttggaat ggagttgtat tatgcggagg gaccaggtac tatcaattat
     3121 ttgaaagact gcggtcacag tatttttctg gatttgaaac tgcatgatat tcctaatact
     3181 gtcgagtctg ctatgaaagt cttggcaaaa ctcggtgtgg atatgaccaa cgttcacgct
     3241 gctggtggtg ttgagatgat gcgggcagca cgaaggggat tgggtgagga tgctgtttta
     3301 atagcggtca ctcagttgac ctctacctca gaggagcaga tgagaacaga ccagaatata
     3361 cagactagtt tgcaggaagc ggttgttcat tatgctcaaa gagcacaaga agctggtctt
     3421 gatggggtgg tttgttcagc gcatgaggtg gctttgatta aagatgctac aagttctgat
     3481 tttgtgtgcc tgacgccagg gattcgtccg actggcggtg aagtaggcga tcagaaacga
     3541 gttatgacac cagcagatgc tgctcgaatc ggtagtgatt acattgtggt aggtcgcccg
     3601 attacaaaat cagaacatcc ttaccagacc tatttgtcta ttaaagagga gtggaatcgt
     3661 ggataaggtt tatcaggtta taatcgatag acctatcggg tatattgata aatttggcaa
     3721 ccagtatccc atcaattacg gctacgttcc aaatctattg gctggagatg gtgaagagca
     3781 agatgtttac atcatttcca aagctgttcg gaagcccttg acagctttcg aggggaaatt
     3841 ggtcgcgatt atccatcgta gagatgatgt tgaggataaa tgggttctga caggtcttga
     3901 tgaaaaactt accgtgacag aaataaaaga gaaaaccaat ttcattgaac agtattttga
     3961 ttcatggatt gaaatggtgg actaggagaa gtctgtagga attcaacggg gataaatata
     4021 gttttttgta gggttcatag attgaaccag tactttagga gtgacaggct attcggcggg
     4081 atggtcatgt tggaatggta cgcatttaga aggaggtcta ttatgacact agcaacagaa
     4141 atcgcatcac acttattgga tattaaggca gttcatctgc gtccagaaaa gccatttaca
     4201 tgggcatcag gtatcaaatc ccctatctat acagataatc gtattacact atcttatcct
     4261 gaaactcgaa atttgattga agatggcttt gtccaacgca ttgaagaaga atttcctgag
     4321 gttgaggtga ttgccggaac tgccacagca ggtattcctc atggtgctat cattgcagat
     4381 cggatgaatt tgccatttgc ttatatccgt agcaaaccaa aagaccatgg tgcagggaat
     4441 caattagagg gtcgcatcgt caagggacaa aaaatggttg tcgttgaaga cctgatttct
     4501 actggagggt cagtacttga tgccgtagca gcagctgagc gtgaaggagc tgacgttatt
     4561 ggtgttgtgg caatctttac ctatgaattg ccaaaggcag atcgtaattt tgataatgct
     4621 ggcgtgaaat tggtgacgct tagcaattat tcagagttaa tcaaggtcgc aaaagtacag
     4681 ggatatatca atgcagatgg tttgaatctg cttaaaaagt tccgtcaaaa tcaagaaact
     4741 tggcaggaag actagattta aaacgagccc acgcacgatt tctgggaact tatcctgtaa
     4801 aatggtataa tagtctctaa cgtattttga gaatacaata attgaccgta tgaggagaaa
     4861 aacatgattt cagttatcgt gccttgtttt aatgaagaag aggcaattcc ctatttttac
     4921 gatgctatgg agaaagttcg taaggagatg ggggaacaat ttgagtatat ttttgtcaat
     4981 gatggttcaa aggataggac attaacggtt ttacgccaat tgtctggtca agaccgagct
     5041 gttcgctatc tttccttttc aaggaatttc gggaaagaag ctgctctcta tgcaggtcta
     5101 caagctgcgc aaggtgagct agtgactgtc atggatgttg atctgcaaga tccacctgaa
     5161 atgttgatgg aaatgaaggc tatgttggat ggaaatccag atttagattg cgttggaacc
     5221 cgtcgagtca gtcgagatgg tgagccaccg attcgtagct tttttgcaaa attattctac
     5281 aaattgatga ataaaatcag ccaggtcgag gtagtagacg gtgcccgtga tttccgtctc
     5341 atgcgtcgtc acatggtaga tgccattcta tctgtgtctg aatacaatcg cttttcgaaa
     5401 ggaatttttg cttgggtagg attcgaaaca gaatacttgc cctatgaaaa tgttgagagg
     5461 gtcgcaggcg aaactagttg gtctttctgg aaattgcttt cttattctat tgaaggaatc
     5521 atcaattttt cagatacacc tttgaatatt gcctcctata caggtttttt caccttccta
     5581 ttgtcgctag ttctaatggt ttttgtggtt ttcaaaacct tggtgatcgg agatcctaca
     5641 attggctggc cgtcgactat ttgtatcatc ctattttggg gaggtctgca gttgatgacc
     5701 attggtattc tcggtaaata tttggcaaaa gttttcttgg aaacgaagaa acgtccgatt
     5761 tatattgtta aagagaaaag ttcaaactag gagcagttta tggaacattc agcttggcac
     5821 gaattgataa aggcacagtt gccagagcat tattttggta aaattaatca gtttttagat
     5881 catgtttatg ctggtggaac catttatccg cctcgtgaga aggtatttgc tgccattcaa
     5941 acaacggatt tagaagaggt tagagtagtt attttgggac aggatcccta tcacggacct
     6001 ggtcaggcac agggcttgtc attttctgtt ccgaactcgg tgccagctcc gccatctctt
     6061 caaaacatct taaaagaatt gacggatgat attggcgtca aacaagatca tgatttgaca
     6121 gcatgggcgg aacaaggtgt gcttttgctc aatgcttgtt taactgttcc agcaggtcag
     6181 gcaaatggac atgcagggca aatctgggag ccttttacgg acgctgttat taaggtggtc
     6241 aatagcttag accagcctgt tgtctatatt ctttggggtg cttatgctcg caagaaaaag
     6301 gcgttgataa ccaatccaaa acatctggtt atcgaatctg ctcatccaag ccctctttca
     6361 gcctatcgag gtttctttgg aagcaagccc ttctcacaag caaatgctta cttgacttca
     6421 caaggcagaa caggaattga ttggctacga taatagatgg taatggcttt ggtactacaa
     6481 aggagaatat gaatgttatt agtgaaaaat ggtcgagtat tggatccgca atccggttta
     6541 gacaaggttt gcgacatctt gatggacgga agtaagattg ttaagattgc ggagtcgatt
     6601 tcagaagatg ttgagcaaga agtgattgat gcgacaggat tagtcgttgc tcctggtttg
     6661 gttgatgttc atgtgcattt tcgggagcct ggtcagaccc ataaagaaga tattcataca
     6721 ggagctcttt ctgcagcagc gggtggtttt acttctgttg tcatgatggc taacactaat
     6781 ccgacgattt caaatgttga aaccttaaaa gaagtattgg attccgctaa aaaagaagct
     6841 attcacattt atagtgtggc aaccattaca gatcatttcg atgggcaaaa cctgaccgat
     6901 tttcctgctt tgctagaagc tggagcggtg gccttttcgg acgacggtat tcctttgaca
     6961 aatgctggcg tggttagaaa agctatgaaa ttagccaaag agcagggctg tctcatcagt
     7021 ctgcatgaag aagaccctga cttgaatggt gtcctgggac ttaacgagca agtagctgaa
     7081 aaacattttc atgtttgtgg agcaacaggc gtagcagaat atagcatgat tgctcgcgat
     7141 gtcatgattg cctatgaaac gggtgcgcgt gttcatatcc agcatctatc caaagccgag
     7201 tcggtcaagg tggttgaatt tgttcaaggt ctcggagcaa acgtcacggc agaagtagca
     7261 ccccaacatt tttcacgaac tgaggactta cttctaacaa aaggtgccaa tgccaagatg
     7321 aatccgccac tacgattaga aagtgattgc ttggctgtga ttgatgggtt gaaatctggt
     7381 gttatctctg tcattgcgac ggaccatgct cctcatcacg cagatgagaa aaatgtggag
     7441 gatcttacgc aagctccttc aggaatgaca ggcttggaaa cctcgctttc acttggtttg
     7501 acgcatctgg tggaagaagg gcatctgaca ctcgtgcaat tgttggagaa aatgactatt
     7561 aatccagcca agctctatgg tcttgatgtt ggctatcttg ctgaaaatgg cccagctgat
     7621 cttgttattt ttgacccaaa tgcaaatcgg ttggtcacag cggattttgc ctcgaagtct
     7681 gctaattctc cgtttgttgg tgatagtctg aaaggacagg ttctttacac cattgcaaat
     7741 ggacaaatag tatttggtaa ataggaaatg agcggattag atggctaatt cgcttatttc
     7801 gaaccttttt gacatgtaag cgattttaat gtttttgttt tttgttaaaa agtgtataat
     7861 agagatataa aaaatgccga agaaaggtct atttatgaaa aagaaaaaaa tcttgttgcc
     7921 tgtaatgtcc acactcttgt tggcgccatt tgttttagct caacaagtac aagctgctga
     7981 gacaacgact gcagctacca caaccaatca gccagcaacg actgatgcaa ctgctacggt
     8041 accagcaacg tcagttgaaa acgtagcaac ggaggaaact gttgtccctg ctgcggaaga
     8101 aacggtagag gcagttatta tccacacaaa cgacgttcac ggtcgcattc ttgaagaaaa
     8161 gaatgtcatc ggtgacgcta aggctgcggc agtcattgaa gaagaacgtg ccaaagtaga
     8221 aaatacaatt gtagtagatg ctggtgatgc cttccaagga cttccaattt ccaactctac
     8281 aaaaggtgaa gaccgcgcca atatcatgaa ccaagtcggc tatgatgcaa tggctgttgg
     8341 taaccatgaa tttgactttg ggatggatca agcaatcaag tacaaggaaa ccttgaactt
     8401 cccgctattg agtgctaaca cttacgttaa tggtgctcgt gtttttgaag cttcaactat
     8461 cgtcgataaa actccaactg ttgtaggcga tgaatttgta gttatcggtg taacaacacc
     8521 tgaaactgct acaaaaaccc atcctaaaaa tgttgaggga gtaacatttg ccgacccagt
     8581 cacagaagtc aataaagtga ttgacgaagt ggaagcgcgt gctctagcag ataatcgtgt
     8641 ttacaagaac tatatcattc tagctcacct aggtgtcgat tctacaacac ctgttgaatg
     8701 gagaggttca actcttgctg aagcactttc taaaaatagt aaattagctg gtaaacgtgt
     8761 tattgttatc gatggtcatt cccacacggt agaagcgact acctatggag ataacgttac
     8821 ttataatcaa acaggctctt acttgaacaa tatcggtaaa gtaaccttga aatccgataa
     8881 attattgggt gaagctagtt tgatttctgc tgcggatact aagaacgtga cgccaaatgc
     8941 taaaatcgca gccttggttg atgaaattaa agcaaaatat gaagctgaaa atgctcaagt
     9001 agttatcgaa aataacccag tggaattaaa cggagaccgc tcaaacgtgc gtgttcgtga
     9061 aaccaacttg gggaatgcag tgacggatgc gatctatgcc tatggtcaaa caggattttc
     9121 aaacaaaacg agccttgctg tgactaacgg tggtggtcta cgtgcaacaa ttgctaaaga
     9181 tcagcctgtt acaaaaggtg atattattgc agtcttgcca tttggtaaca ttgtttctca
     9241 aatcactgtg actggtcagc aaatttatga tatgtttacc aagtctttat catctacatt
     9301 gcaagtgaat ccagaaactg gcgagatgct tttagatgaa aatggcatgc cgctctttga
     9361 agctagtggt ggattcctac acatttcagg agcaaatgta ttctacgatc caactcttcc
     9421 tgtagaagaa cgtgttcttc ttatcggtat tcttaatcca gagactggcg aatatgacgc
     9481 cttggatctt gaaaaaacgt actatttagc aacaaatgac ttccttgctg ctggtggtga
     9541 tggctacaca atgcttggcg gagcacgtga agaaggtcct tcaatggaca gcgtctttgc
     9601 tgaataccta aagacagctg acttatcagc ttatgaggtt gtcaacccat attcacgtat
     9661 cattcctgta aattcaagca ttgatacgga tgaagatggc tacccagact ttatcgaaat
     9721 tttattggat actgatccag aaaatccagc ctcaaatcca gaaactgttc cagccgaaaa
     9781 tacggattca ccatctaatc aagtacaaaa tacttcagca acggacaaga aagctccagt
     9841 tgattctccg aaagtaggag ataaaaaacc agaagtagca agtccagtaa aaactacaaa
     9901 agcaggagtc ttgccaaata ctggtgacca gatgaatctg acgctcagcc tgtttggttt
     9961 aggtcttgca ggactggcca tggcagtagg tcgtagaaaa gaaaattaat caatcatctg
    10021 aaaacagggt cttcggactc tgtttttgac tggaggaaac atgcaaactg tatttcaata
    10081 tcaaaaagag ggggatcgtg agcagattag ttcttacgtt ctgcttagca actccccgcg
    10141 tcgtaaacaa ttattgggat ttttacaacc acaaatcgca tcagttgaag tggatgagcg
    10201 tggtatcgaa gaacatttta tgaaacaatt cgctacagat gattttctca ctcgagctgc
    10261 aaaaacctgt tgtgaaattt ccaaagccaa atcggacatg gatttggtaa ctggtcatct
    10321 ctacatttct gcggatacaa tcgtcgtgtc agatgggcaa atttttaaca agcctcaaga
    10381 tttgacagaa gctgaaacca tgttacgttc ctattttgga aagagtcatc acgttgtaac
    10441 ctctgtctgc ctacggacaa gacactcact agatgttttt tatacggttg cacagattga
    10501 ttttgtcgac tattatccag cccttgaaga ggttattcaa tcatatatcc gtgaaaagca
    10561 gccactcgac aaggcaggtg catacggtat tcaggagctg gatccacgct ttgtgtcggg
    10621 catttcaggg gatattcaca ccattattgg tctacctgta gccgaagttt cccgcaggat
    10681 tttttctgaa gaaggttttg aaaaatagca gagctcaata gctagtttgt ggtataatag
    10741 tggtcgaaaa ggagagttta tgaccgtcga cattgaaaga tacaagcaat tggcccagca
    10801 gaagcaagga gaacatcgaa aatttctagc aaatttgaag aaaaaagcac ctaaaaattt
    10861 ggatagaatt gttcaagata ttcatgccga agtattttct gaaatcgact gtacagagtg
    10921 tgccaactgt tgtaaaacat tgggaccact ctttacagaa gcagatatta cccgaattgc
    10981 caagcatttg cgcatgaaac ttccagtttt tgaggatatg tatttgcgta tggatgagga
    11041 cggagataag gtatttcaat ccatgccctg tcccttcctt ggaggcgata atctatgtag
    11101 tatctatgat gctcgtccca aagcctgtcg agaatttcca catactgacc gcaagaagat
    11161 ttatcaaatc aacaatttaa caataaaaaa tactctgatt tgtcccgcag cctatctctt
    11221 tgtcgaaaag ttacgggaga gaatttaaga ggaacaagta agacaaaata ttgattttct
    11281 gctataataa taaaaaaaca agccgttttt acggcttttt tcaatgaatc atatttagga
    11341 ggaccccatg gcaacaattc aatggtttcc gggccacatg tcaaaagctc gcaggcaggt
    11401 gcaggagaac atcaagcacg ttgatttcgt gaccattttg gtcgatgctc gcctgcccct
    11461 atctagccaa aatcctatgc tgaccaagat tgtcggcgac aagcccaagc tcatgattct
    11521 caacaaggtc gacttagcag atcctgttcg taccaaagaa tggcagatct actttgaagg
    11581 tcaaggcatc cgtacccttg ctatcaactc aaaagagcaa gcgacggtaa aaaaggtgac
    11641 cgacgcagcc aagagcctca tgaaagagaa gattgaacgc ctccgagaga gaggtattca
    11701 aaaagaaacc ttgcggacca tgattatcgg tattccaaac gctggaaaat ccactctcat
    11761 gaatcgtctg gctggaaaga aaattgccgt tgttggcaac aaaccaggtg tgacgaaggg
    11821 ccaacagtgg ctcaagtcca ataaagacct tgaaatcctt gatacaccag gtattctttg
    11881 gcctaagttc gaggaccaag aagtcgggct caaattggct ctgacaggag ctatcaagga
    11941 ccaacttttg cctatggacg aagtcaccat ttttggtttg gactatttca aggcaaatta
    12001 tccagaacgc ctagaagagc gatttaaggg tatggatttg gagcaggaaa cgcctgaact
    12061 catcatggac tggacaaaaa aattaggctt ccgtgatgat tatgaccgtt tttacaacct
    12121 ctttgtcaag gacgttcggg acggtcgctt gggtacttat acattagaca gggtgagtga
    12181 cttagatggc aacgattaag gaagtgactg ctctgctggc tcaggtggac aatctggaca
    12241 gtcctgtctg ggcggactta gctcaggatg agcgagcagg ggtccagact gccatcaaga
    12301 aacgccaaaa ggagttggaa aaagaagcag cagaagatgc ccgcttagaa gctatgctat
    12361 gctacgaaaa agccctttat gaaaatgggg tagagttaat cgctggcatc gacgaagtcg
    12421 gccgggggcc tctagcaggt cctgtggtgg ctgcggcggt tatcttgccc aaagggtgca
    12481 aaatccgcta cctcaacgac tccaagaaaa ttcctaagtc caagcatgaa gcaatctacc
    12541 aagaagtcat ggagcgagcg gtggcagtcg gtgtgggaat aaaagatgca gctgtcatcg
    12601 accaggtcaa tatctacgag gcgaccaagt tagccatgtt ggaggctttg gggcagttga
    12661 gccaagagcc tgaacacctt ttgatagacg ctatgaagtt ggatacgccc ataccacaaa
    12721 cttccatcat caagggagat gccaatagcc tgtctatcgc agcggcttca atcgttgcca
    12781 aggtgacgcg ggataagatg atggcggact atgacaagga gttttctggc tatggttttg
    12841 ctaagaatgc aggttatggc acggcagaac acttggaagg cttgaacaag ttaggcatca
    12901 cgcctattca ccgtaagacc tttgagccca ttaagtctat ggtagcaggg ggaaactagt
    12961 cttgacagtc tttttctggt tatttttagc ggctatcggt ctgtttgctc tcgtctattt
    13021 ctgggagcgg cggtcgattt ttatctcact gtttgctttg aacatcctgg tctgggcctt
    13081 ggcatggatt atctcaacag gcattctcga aaacaatgaa atcttgcgct tgctggctat
    13141 agcagtggct atggtgctct ttttagcctt gttaagtggt ccatttgtct tgcttttcac
    13201 actttatcta aatggttttc agattttgaa gagagaaggg gttcgcttcc ataatttcct
    13261 atccatggga ctggcggtag ccctgacttt ctatctcttc atcgcaccct ttgtggttca
    13321 atctctatca gccatcagct ttttcaatat ggtgtttgtc tatgttggat ttttagtgtc
    13381 ttatgccatt atcatcagca tgctctatac cacgtctagc tttgtcaatt tggtcaatct
    13441 tttcccaggc aagcttgatt atgtagtggt cttaggtgct ggcttgattg gtgacaaggt
    13501 aacgccactt ttggcttcgc ggattgacaa aggcatagcg atttatcaga agcagcctgg
    13561 cagtaagctc atcatgtcag gcggacaagg tcctgatgaa ctcatagctg aaggtcaagc
    13621 tatggcaaat tatgccttgg agaaaggagt gcctgctgaa gacattctca tcgaaaacca
    13681 atcgaccaac acagaagaaa atttgaaatt ttcctatgcc ctgatgaaac ctggcagtcg
    13741 atttgcactt gtaactaatt actatcatgt tttcagagct ctgctattgg cacgacaatt
    13801 gaaaatcaaa tgtatcggct acggcgcaaa aaccagattt tactttagcc tcaatgcctt
    13861 tattcgggaa tttgtaggct atgtagtcat gagccgaaag acgcatttgg tctttttgag
    13921 catcgtgtca gccctttacc tgatcggagt gattatcagt ttaatgcatt aaaaacagcc
    13981 tctaggtgac tagaagctgt tttcttataa cataaagtag acaatggcga tatactgaag
    14041 tgccgaagct agtaggataa agagatgcca aatcatgtgg aagtagggct ttttcttggc
    14101 gtagaagagg gctccaatag tataagataa tccaccagcc agcatgagaa tgccaaatgc
    14161 catttcagtc ttttgaagaa tggctggcaa gataaagaca accaaccagc ccatgaaaag
    14221 atagaggaag aggctgaatt tttcgtttat ttttttagca aaaattttat agagtatacc
    14281 gaaaatagtt aatccccatt gcaaacctac aatcagataa cctagccaac cacctaccaa
    14341 ggaaagggca acaggtgtgt agcttccagc gatggcaatg taaatcatgc tatggtcaat
    14401 aatcctcagg atgtatttgt gagtagaagc atagggcatg gagtggtaga tggaagagga
    14461 taggaacatg agaaataggc tgatgacaaa gatagacata ccaatcacag cggtcaggtt
    14521 ataatcttga taggaatgaa tagcagtaat ggggagcaag accaacataa gcagggctcc
    14581 gactgcatgt gtgacactgt tagcaacctc ctctccaaag gatagttgca ggctcaattt
    14641 caaactagga ttcatggtga ctcctttcta actccatagt gagttgacgg gttttgtagt
    14701 aaagtttgac agacttgcag gcataacgaa tgatttcagg cgtttcgtcg ctctcctcat
    14761 ttcgcatgca gtcaacaaaa tgattgtaga gtgtttctga atgactcgat tggagaagaa
    14821 gatttaaggt ctgactgatt tcttgaatag aaaagacatt ttttaagata gtcaaggcaa
    14881 tcaagcgggc aacttgctgt ttttgatatt ttttcttaac aggtttttca agctgtttat
    14941 gtttgacgta gttgtttatc atagaggccg tcaaactttt ttgttccaat agctctgatg
    15001 aagtggtcgt ctgattaaca tacagcagaa cttggtccaa atataaatct aaatcaggta
    15061 attcatgcca gtagggaata gtttgtttca tggttatcta ctttctttta tctagtatct
    15121 ataactagat tatataattt ttgaaaaata aagtaaagaa aaagggactt cctttccgaa
    15181 atacccttat ttcacaatca atccgtccca agcatccatg ccacctgcaa tatcatttgc
    15241 cttatatccc ttagagtaca taatttctct ggccagcttg ctacgttttc cacttttaca
    15301 gatgagtaga tagtgttggt cgactggtcc atccaatgcg gcaatcttat ccataggaca
    15361 attaatagca ccatcaatat gaccagctga atattcttct gggtcacgaa cgtctagcaa
    15421 ttggacagat tcggtttgca tcaagtcgag caattctgca gcagacaagg ttagtgtttg
    15481 ttcttgattt tctagcataa ttccctcttt cgttggttta aattaataag aacaatacca
    15541 aatcttgact ggatttgtca agaaggattg acttttagaa tgagaaatcc tatgataagt
    15601 agtaagaaga aaaaaaggag caaatgcatg cctacagaaa aagaaaagat gatagctggg
    15661 caattttata tggcagcaga tccagaactt agacaaatga gaacgctggc tcgccaaaag
    15721 atgcaggact tcaataatga attagatggc tctatacgtt ctcaaatctt gaaaaactgg
    15781 tttggagcta caggagagcg gatttacatg gagccaaatt tctactgtga ttacggaagt
    15841 aacatccatg tcggagagga tttttatgct aatttcaact gtactatgct tgatgtctgt
    15901 ccgatacgaa ttgggaaaaa tgctatgctc ggtcccaatg tacagttgct aactccactt
    15961 catccactag atcctgatga acgaaattct ggtttggaat atggctctcc cattaccatt
    16021 ggtgataatt tctgggctgg tggtggtgtg acaatcttac ctggtgtgac cttgggcaac
    16081 aatgttgttg ttggtgctgg ttccgttgtg accaaatctt ttggtgataa tgtcgttttg
    16141 gctggcaatc ctgcgcgtgt tatcaaagaa atacctaaaa aataattctt cttcgggaga
    16201 attttttctt tgccttgcga atagtataag tgaggtgaag aaaatgaata attttgaatt
    16261 gtttaaatgg aaaaaagcag gtttgaccaa tcttaatgtg aataaagttt tggcctatca
    16321 agatttacat ggaaaaaaat tgaccttgcg aaatgtcgct gtagtgtctg aatgtaaaaa
    16381 tccagtgcta tttatggaaa attataagaa tctagataca aaagcctgtc gcgaggaatt
    16441 taataagtat ccatcatttt caattttgga tgacgtttat ccattagctt tgaagcaaat
    16501 ttacaatcca cctgtacttt tgttttatca aggggattta gaattgctag aaaaatcaaa
    16561 gcttgcagtt gttggtactc gaaatgccag caaaaatggc attcagtctg tccagaaaat
    16621 tatcaaggaa ttgagcaatc gttttgtcat tgttagtggt ttggcaagag gaattgatac
    16681 agctgcccac atcgccagtt tgaaaaatgg aggccaaacc attgctgtaa ttggaacagg
    16741 tttagataat atttatccaa aagaaaataa agatttgcag acctatattg gaaaacacca
    16801 tttagttttg actgaatatg aaccaggtgc agaccctctc aaataccatt ttccagaacg
    16861 caatcgcatt atagctggtt tggtggaagg attggtagtc tgtgaggcaa aaatgcggtc
    16921 tggtagcttg attacctgcg aacgtgcctt ggaagaagga agagaagtct atgccatacc
    16981 tggttccatt atggacggaa aatcagatgg ttgtcatcat ctgattcaag agggagcaaa
    17041 gtgcgttaca tcaggcttgg acatcatttc tgagtatcaa ttttaaaaca agtcttccta
    17101 taggaaaata aatatcttga cactgactga aaaatagtat attctttgtg aggttaaaaa
    17161 tatttgtaag gtataagaat ggctacaaaa acagttagta agaaaaaaac aacaaccaag
    17221 aaaaatctcg ttattgtaga gtcgcctgct aaggcgaaaa caatcgaaaa gtatcttggt
    17281 aaaaattata aggtcgttgc ttcagtcggg catattcgag atttgaagaa atctagtatg
    17341 tctattgact ttgataacaa ctatgcacct gagtacatca acatccgtgg aaaaggacca
    17401 ctcatcaatt ctttgaaaaa agaagcaaaa aatgctaagc aagtctttct cgctagtgac
    17461 ccggaccgcg aaggagaagc aatttcttgg catttggctc acattttggg attggacgca
    17521 aacgataaaa accgtgttgt ctttaatgaa attacaaaag atgcagtaaa aaatgccttt
    17581 caggagccac gtgctattaa cctagacttg gtagatgccc agcaagctcg tcgcgtctta
    17641 gaccgtattg tagggtactc catatcacct attttatgga agaaagtcaa aaaaggtctg
    17701 tcagcaggac gtgttcaatc ggttgctctc aaattaataa tcgaccgtga aaatgaaatc
    17761 agcaatttca aaccagagga atattggaca atcgatgcca cctttaaaaa gggtacaaag
    17821 aaatttcaag ctagctttta tggactagat gggaaaaaag ttaaggttga aaacaatgaa
    17881 caggtcaagg agattctggc tcgtttaaat agcgatgatt tcttggtcga acaggttgag
    17941 cgtaaggaac gcaaacgaaa tgcacctctg ccttacacaa cttctaccat gcagatggat
    18001 gcggctaata aaatcaattt ccgtactcgt aaaaccatga tggttgccca acaactttat
    18061 gagggtgtca gtcttggcac aggtggtacc caaggtttga ttacctatat gcgtacggat
    18121 tcaacacgta ttagccctgt tgcacaagca caagctgctg actttattac ggagcgtttt
    18181 ggtgctacct attcaaagca tggtaataaa gtaaaaaatg ccagtggtgc acaagatgcc
    18241 cacgaagcta ttcgtccctc aaatgttaac ttaacacctg aatcaattgc aaaatatctg
    18301 gacaaggacc agttgcgact atatacactg atttggaatc gttttgtcgc aagtcagatg
    18361 gctgcagcag tttttgatac catgagtgtt cgtttgggtc aaaatggtat tgtctttgct
    18421 gctaatggta gccaagtaaa atttgatggt tatatggctg tctataacga cgctgataaa
    18481 aataaaatgt tgccagatat ggaacaaggt gacacggtgg tgcgcgcgtc aacaaatcca
    18541 gaacaacact ttactcagcc accagctcgc tactctgaag caaccttaat taaaacatta
    18601 gaagagaatg gtgtaggtcg cccgtcaacc tatgcaccaa cgattgaaac cattcaaaaa
    18661 cgttactatg ttaagcttgc ggctaagcga tttgaaccaa ctgaactcgg agaaattgtt
    18721 aataagctga ttgttgaatt cttcccagat attgtcaatg tcaaatttac agccgatatg
    18781 gaacaaaaat tggatgatgt agaaatcggg aaagagcagt ggcagaaggt cattgacggt
    18841 ttctatcagc cattcaaggt agaattatct aaggcagaag aacagatgga aaaaatccaa
    18901 attaaggatg aaccagctgg ctttgactgt gatgtttgtg gacatgaaat ggttattaaa
    18961 ttaggacgtt ttggaaaatt ctatgcatgt agcaatttcc cagattgtcg caataccaag
    19021 caaatcacta aagaaattgg tgtgacttgt ccagtttgcc aaaaagggca agtgattgaa
    19081 cgcaagagta aacgcaatcg tcttttctat ggttgcgatc gctacccaga gtgtgaattt
    19141 acttcttggg acaagccagt cgggcgttct tgtccgaaat gcgaccacta tctcgttgag
    19201 aaaaaagttc gtggtggtgg taaacaagtt gtctgtccaa atggtgacta cgaagaagac
    19261 aagattaaat aagattaaac tgctattctc aagggaatgg cagttgtttt ttagagtcat
    19321 gtttagttta tcttagctta cttcgacaag cgaggaaact tcgtctcctt attttcaact
    19381 ttaaacgagg ctggtcaaaa agtccaaagt cacttctcgg tgcagtggtt gattgggttt
    19441 aacaggccag tggagtgaaa ctgttcagtg aactgtttca gcctgagctt agaaatgaaa
    19501 aaatcgaggt aaaaaggttg gagataagat ttgcgaagca aatcacagca attcgtgttt
    19561 cacattccaa gtctgacctc tacaactaaa acgaactaaa cggcaatgct gcttgaaaaa
    19621 aatattaaaa aaataggaga aaagtcttgc attattgaaa atactgtgtt atgataattg
    19681 aggtttgaaa aaactgacct aagacagtag gggagctgga ctcataaaca tcctaccgag
    19741 gcacaaaacg attattgaga taaacgtatt tgtactttcg tgtctaggtt taggtacgat
    19801 ttttttgtgc ctagcccaaa ataaaaacgg aggtaaaaaa atgagtgaag ctattatcgc
    19861 taaaaaagcg gaattagtaa atgccgttgc tgagcaaatg aaagctgcaa catctatcgt
    19921 tgttgtagac gctcgtggtt tgacagtaga acaagataca gttcttcgtc gtaacttgcg
    19981 tggtgcagaa gttgagtaca aagttatcaa aaactcaatc ttgcgtcgtg ctgctgagca
    20041 agctggtctt gaaggtcttg cagaattgtt tgtaggtcca tctgcagttg cattctcaaa
    20101 cgatgcagtt gctccagcta aaacaattta cgatttcgcg aaaactgctg atgctcttga
    20161 aatcaaaggt ggagctgtag aaggtaaagt ttcttctaaa gaagaaatcg aagcacttgc
    20221 tacattgcca aaccgcgaag gcatgctttc tatgttgctt tctgtacttc aagcgccagt
    20281 tcgcaacgtt gcatacgctg tcaaagctgt tgcagaaaaa gaagacgcag cttaatgcgt
    20341 cagagcgtag ctgcttagtg ctacaaacta tttaaaaacc taaattggag gaaaatcaca
    20401 atggcattga acattgaaaa cattattgct gaaattaaag aagctactat ccttgagctt
    20461 aacgaccttg ttaaagctat cgaagaagaa tttggtgtaa ctgcggctgc tcctgtagct
    20521 gttgctgcag ctggtggtgc tgctgaagaa gctaaagact cattcgacgt tgaattgaca
    20581 tctgctggcg acaaaaaagt tggcgttatc aaagttgtac gtgaaatcac tggtcttggt
    20641 cttaaagaag ctaaagagct tgttgacggt gcaccagcta tggttaaaga aggcgttgca
    20701 actgcagaag ctgaagaaat caaagctaaa ttggaagaag caggcgcttc agttactctt
    20761 aaataataga gtttccaatc aaaataaaaa cctatcactt aatgtggtag gttttttcgt
    20821 tctattgttg caaacgtttt cgttgtgggg tataatataa aaaatgctgt ctaaatatta
    20881 ggagaaagac atgaaaagtt acaaaaacta tatcttcgat ttttatggta cattggttga
    20941 tattcgtaca gatgagaata aactagaggt ctggaatcag ctaacacaga tttacaatgc
    21001 ttttggttgt tcctatcgac cgcgccagtt gaaaaatgcc tatcatcgtt ttgtagaaga
    21061 ggcagagaga tttctcgcgg aaacagtgag ttatcagtat gtcgaaattg atttagaaac
    21121 aatcttcatt cgcctattaa cggatgcacc aaatgaaaac caaagtacca ataagccgac
    21181 tgatttagag acttttgggc aagtagtagc cacgattttc cgcgtgcttt cacgtgaaaa
    21241 gttagaggct tatgaaaata ccctaactag tctacagaca ttaaaggaca gagaagtgcg
    21301 attatttatt ctctccaatg ctcaacgaat ttttactcag gcagaaattg aacagacagg
    21361 ttgtgctgat ttgatggaaa aaatttatat ctcttctgac tttaagatga agaagcctga
    21421 accagcattt cttcaactgg ttttagagga aaataatctt gatgttgagg aaacggttat
    21481 ggttggtaat gatttgacat ccgatatagc tattgctcat gaattgggaa tggattccat
    21541 tttgctgaat actttcccgt atagtcagga agaaatcgac tcttatagga gacttggttg
    21601 gaattttgag gttgttggag atatagcgga gctattgtaa ataagcgata gaacagcaaa
    21661 ggatatacat aaaatatatt atgtaaaaaa gtggaactac tttcatttca atgaaggtag
    21721 ttttgtcttt tctagccatt ttctggtata ctagataggt ataaaattta gaaaggttct
    21781 gttttggggt attcccaaac agtagtcaga tattctggct agaggtatta gtttcatgtc
    21841 tcaaacccac attaatgtta taggagctgg cttggctggc tcagaagctg cttatcagat
    21901 tgccaaacgt gacattcctg tcaaactcta cgagatgcgt ggtgtcaaac caacgcccca
    21961 gcacaagacc gacaagtttg cggagttggt ttgttccaac tctttccgtg gagatagttt
    22021 gaccaacgct gtcggtcttc tcaaggaaga gatgcgtcgt ttggattcca ttatcatgcg
    22081 agctggtgaa gcccaccgtg tgcctgctgg gggtgccatg gccatggacc gtgagaattt
    22141 ctctcaagca gtcacagatg agattcacaa ccacccactg attgaggtca ttcgtggcga
    22201 gattacagag attcctgacg atgctatcac agttatcgcg acgggacctt tgacatctga
    22261 cgccttggcg gagaagattc acgcgcttaa tggtggtgac ggtttttact tctacgatgc
    22321 ggcagcaccg attgtcgaca gctcgaccat taacatggac ttggtttatc ttaagtcccg
    22381 ttatgacaag ggagaggctg cctatctcaa tgctccgatg aacaaggagc agttcaacgc
    22441 tttctatgaa gctttgattt cagccgagga agcaccgctt aactcctttg aaaaagaaaa
    22501 atactttgaa ggctgtatgc ccattgaagt tatggccaaa cgtggtatca aaaccatgct
    22561 ctatggccca atgaagccag ttggtctgga atatccagaa gattacaagg gaccacgtga
    22621 tggcgaatac aagacacctt acgcagttgt ccagctccgt caggataacg cagcaggtag
    22681 cctttacaat attgttggct tccagactca ccttaagtgg ggcgagcaga agcgggtctt
    22741 ccagatgatt ccagggcttg aaaatgctga gtttgtccgc tacggcgtta tgcaccgcaa
    22801 ttcctacatg gattcgccaa acttattgga acagactttt gccaccaaga aaaatcccaa
    22861 tcttttcttt gcaggtcaaa tgacaggagt agaaggctat gtcgagtctg ccgcctctgg
    22921 cttagtggct ggtatcaacg ctgttcgccg cttccgtggc gaagagccgg tcatcttccc
    22981 gcaaacaaca gccatcggag ctctgccatt ctacatcacc cacaccgaaa gcaagcactt
    23041 ccagcctatg aatgtcaact ttggcatcat caaggagctg gatgggccac gtatccgcga
    23101 taagaaggag cgttatgaag caatagcaga gcgttccctc aaggacttgg aagagttttt
    23161 gacttactaa gataattagc tatctccaga caccttcggg tgtcttttgt gttatactgg
    23221 gattagaaaa gcggaggaga aatacgatgc accacgatac ttggaaggga attattctgc
    23281 agaaacaagg tctgttggaa ccccagtctg ttcagcaaat ctgccaaaat ctcaatggtt
    23341 tgcaggctca gtttcagccc tatgttcatg tcggatttcg taaccgtatg acagcggagg
    23401 attttcatga gggtagctgg caggaggagc tgacacgcca gtggtccatt cggcgaacgg
    23461 ttcatgccta tctcaagtcg gaaattcccc tctatatcca cgaggggcgg ctggccagca
    23521 ccgactacct aaagacagaa ggacgggacg ggtttagccc tcaaaccaag cagaagtatc
    23581 accagctgat tttagaagcc cttgaacaag gtcctatgac ccgtgaggat ctcaaggtcc
    23641 tttgccgtgg ggaaaagatg acacaagaag aggagaagct ggtctttaac gcctggggtg
    23701 gcctctttcg ctacatggtc gagcgtggag aagtctatca agaatacggt gccaagcgtt
    23761 ttcatcgtct gacagacttt cagccacttt ctcgggaaaa agcagagctg gaaatcgctc
    23821 gacggtattt tgcaggtttt ggccctgtca gcctagccga tgcccgttac tatttcaagg
    23881 aaaataaatc gacggtccta aactggatga agcaattaga cctgaaaacc gttgaggtag
    23941 caggggaaga acgtttttat ctgggagaat tagaagaagc agaactgcct gactgcctct
    24001 tcgttgcagg atttgaccaa cttttactag gttatgaaaa gaaagctaat ccctttttta
    24061 atcctaaata catccgtaat atctatactt tgacgggtat tgtcaaacct gttgtatttt
    24121 ataaagggcg atttgtggca acctggaaac gagataaagg tactattttg ctagatattt
    24181 ttgaagacat cacacaacaa gaagaaaaag aattggatca ttaccgccaa atgtatgaga
    24241 aaattctgtg acattaacta actatgttcg gaaaatccga aaattgcaaa taaataacta
    24301 aattttctga atattctaga aaaactatga tataatactt aaaatacgta aggaagagat
    24361 agatatgaat aagtcttact tttatttgga catgagaact catgaattag atgtaccatt
    24421 tacaggaaga aaacgtcgag tccgtgtttt attgccgaaa ggatatgctg aaaatacaga
    24481 agagacctat cccgttgttt atttccacga tgggcaaaat gtactctaca gtaaggaagc
    24541 tttttcaggt cattcatgga aagtcatccc aactattaag cgtaatccag acattgcaaa
    24601 aatgatcgta gtggctattg ataacgatgg tgctgatcgc atgcatgaat atgctgcttg
    24661 gaagtttagt gagatgggga ttcctggggt gcagttcggt ggtaagggaa ccttgtatgc
    24721 tgaatttgtc atggatgtcg tcaaaccatt tattgatcaa gaataccgga caaaatctga
    24781 taaagttcac actgcaatga ttggctcatc cttgggaggc aatatcacac aatttatggg
    24841 attggcttat cagaaccaga ttggctgtct gggtgtcttt tcatcggcca attggcttca
    24901 tcaagatgct ttcgaccgtt atattgaacg tcaacaatta gactcagagc aacgtgtcta
    24961 catctacgtt gggacagaag aagcagatga tacagataaa acattgatgg caggaaatat
    25021 caagcaggcc tatatcaatt cttcattgac ttactatcgt caattgatcg ctggcggagt
    25081 ggatttggac aatatcgcct tagaagtcgt ttcaggtgcg gtccataatg aagaggcttg
    25141 ggcgctctat ttgccagctt gcctacgatt cctaagcgaa cattggtcat aaaataaaaa
    25201 tatacaaata ggaggcttta ctatgcacgt tgaattttta agtcattggt ctggaaatct
    25261 tggccgagaa atgaatctaa atcgttatgg tcacgcaggg attcctgttg ttgtatttgc
    25321 ttcatcaggt ggttcttaca atgaatatgc tgattttggt atgattgaag cttgtcgtgg
    25381 atctattgaa gctggtcagg tccaattttt tactctaact agctacgata gtgaaagctg
    25441 gttggcagac tggaaatcca ttcatgataa ggcagaggct caccgcgcct acgaacggta
    25501 tgtgattgaa gaagcgattc catttatcaa acataaaacc ggttggtttg atgggatgat
    25561 gacaactggt tgttctatgg gagcttatca cgcgctcaac ttcttcctcc agcatccaga
    25621 tgttttcaca aaagttatcg ccctttcagg tgtctatgat gctcgattct tcaacaacaa
    25681 ccatgattat ggtcatgatg atgcggtcta tcaaaactca ccgtctgatt acatctggaa
    25741 ccagaatgat ggttggttta ttgacaaata ccgtcaagca gatattatcg tctgcacagg
    25801 tttgggcgat tgggaacaag atggtctgga ctcattctac aacctaaaac gtgcctttga
    25861 agagaagaat atcccagctt ggtttgatac ttgggggaca gatgtggccc acgactgggt
    25921 gtggtggaga aagcaaatgc cattcttcct tcattctatc ggactataag ctagaaagga
    25981 ctacctatga attatctcgt tatttcacct ttttatccag aaaattttca accgttcacc
    26041 attgaattag ctaaaaaaga aggcgttacg gttctaggta tcgggcaaga accttacgat
    26101 caattgcccg aagaacttcg taatgcctta acagaatact tccgtgttga gaatcttgaa
    26161 aacttggatg aagtcaagcg tgcagcagcc tttcttattt acaagcatgg tccaattgac
    26221 cgtgtagaat cccacaatga acattggctt gaaaacgatg cagccctccg tgaacaattc
    26281 aacatttttg gtgctaagcc taaacacctg aaaaagacca aatttaagtc tgaaatgaaa
    26341 aaatatttca aaaaagcagg tgttccagtc gttccaggtg tggttgttaa atcggaacgt
    26401 gattttggca gagctttgaa gaatgttgga tttccaatga ttgccaagcc tgacaacggt
    26461 gttggagcat caggtacctt caaaatcgaa aataaagaag attttgatcg gtttgtggag
    26521 acatgggatg gagcaactat ttatttcctc gaaaaatttg tcaattcaag tattatcact
    26581 acttatgatg gtttgttgga ccacgaaggc aatgttgtct ttgaaacagg cttgacttat
    26641 gttcatactc cgctggaact gatgttgtct agaaaagaca atgcctactt cattgagaag
    26701 gagttggatc ctcaattagt aaaatatggt cgcgcgatta tcaaggcctt tggtatgaga
    26761 gagcgttttt tccatattga atttttcaag gatggggacg actacatcgc cattgaatac
    26821 aataaccgta tggcaggcgg tttcacagtt gaagcctata actacgccca ttccattgat
    26881 cttttccgtg attatgccaa tgtcgcaaca ggtggtacag tggaggaacg tagatttgaa
    26941 ccacaatact gcttggtcgc aacccgccgt gatacgaccg aatatgttca ctcagcagat
    27001 gacattcatc agaaattcgc tggtaagatt aaaactgtca aacgcatgcc agatgcattt
    27061 gcggaacttc agggaaatga tgcctatcta cttgtaacgg aaagcaagaa agagttagat
    27121 gaaatgattg cctacattgg tctaacaaaa taaaactaac tgtaagacgc cagaaatggt
    27181 gtcttttttc ttttcttaca aagctgtaag ttttttaatc agaactgtaa gagagcacag
    27241 gaggaatatt ttctataata gactcataag aaatagaaag aaggaaatca tatgtcattc
    27301 aaatttctac aagcaaagag aatagaagaa aaggtattct cagaaaaaga gaaagctgaa
    27361 ctcatggaac aagccttatt cttagaagat ctcgcccata atttgcaaag tatgcgattt
    27421 atggcatact agagggagga aactatgaaa aagaaagtaa ttagcatgct ggctttggga
    27481 agcataatcc taactgcttg ctcttcctct tcagcaggtc ttagctttga tgagggctat
    27541 caaactttcc attacaaggg aaaagtctat gccgttagca aacaggaagt tgccgaagat
    27601 agtattcaag gaacagaagt tcagtttatg gaatggcctg ttgtcaaaga agaaggggca
    27661 gtgaaaaaga cagtatcctt gaataatctc tatgtaacca ctaacaagga atgggccatc
    27721 ggtgtccagg atggttacta taaggtagat ttagaagaaa atgttgctga atcagaccga
    27781 atcgactatc aagcattact tgatacagtt gatttatcca aagaaaacaa ttaggagttt
    27841 gtatgttatt agaaatcaat catttagaaa aagtttatcg cacgcgcttt tcaaaagagg
    27901 aaactcgtgc cttgcaagat gtggatttta aggtagaaga gggcgagttt atcgccatca
    27961 tgggtgaaag tggttcaggt aagacgactt tgctcaacat tctagcaacc ctggacaagc
    28021 cgacgagagg ctctgttatc ttaaacaatc aagacatcac caaaatcaag gaaagcaagc
    28081 tggcagattt ccgtttacgt aatctaggtt ttgttttcca agattttaat ctcttggata
    28141 ccctgtccat ccaagataat atctttttac ctctggtatt ggcacgtact agctatgagg
    28201 aaatggaaaa acggttgaaa gttttggcgc caaaactgcg gattcaagat ttgctgaaaa
    28261 aacgtccttt tgaactttct ggtggacaaa agcagcgcgt ggccattgct cgtagtttga
    28321 ttacccggcc acagattgtc ctagcggacg aaccgacagc tgccctagat taccgcaatt
    28381 cggaagattt gctgaatttg tttgaagaca tcaacctaga tggacaaaca attctcatgg
    28441 taactcactc agccaacgcc gccagccatg ccaaacgcgt cctcttcatc aaggatggtc
    28501 ggattttcca ccaattgtac aaggcaggta agagcaatca agactttgcc aaggagattt
    28561 cgctcaatat gtctgcactt ttagggggtg agtagatgtt ttacctcaaa cttgctggac
    28621 aaaatatccg aaaatccatg ggtgtgtttg ctcccttcgt tttagctagt ctggtcctct
    28681 ttaccttgat ttgttctatg ttcttactca tgctcagtcc agtcatgaaa accatgggaa
    28741 caggtgctgt gtctatcggg ctgggtgtcg ttgtattgac tattttctcg ctgattatgg
    28801 aaatatatag ctttaatttc ctcatgcaac aacggactag ggagttcggg ctttacaata
    28861 tgctggggat gaacaagaag aaggtggcct tggttgccag cattgagttg tttttcatct
    28921 tcctcttggt cattgtgctg ggttctgcat tagccggtgt atttgctaat gttctctact
    28981 tgatttttgt gaatctgacc aattatagtg acttacactt taatatttca cctctggcat
    29041 ttgccatgac cgcctttctc tttgcaggta tcttctttat cttggaatta ctggctattc
    29101 ggactattgg caagaccagt ccgctgattt tattccgagc tagtgaaaaa ggggagaagg
    29161 agccacgtgg gaacctcctc ttggctgccc tcggtgttct tagcctaggt gttggatact
    29221 acctatcact ttcatctaaa gctgctggtg ttggtgtcat ttatcgtttc tttatcgcag
    29281 tgctctttgt cgttgcgggg acctatctgt tctacatcag ttttatgact tggtatttga
    29341 aggctcgtcg gaaaaacaaa cgctattttt acacgccaga gcatttcatt acgacttcgc
    29401 agatgatttt ccggatgaag cagcacgcaa cgggcttggc caatattaca ctgcttgccg
    29461 tcatggcctt tgtgaccatt gcgactacaa cctcccttta tacaggtatg agcagtatga
    29521 caggtgcact atatcccaag gaaacatcta ttacctatcc tgtttcggat agaagtcaag
    29581 gcgaagctgc ctatcagcaa tcggtgctca gccattttcc agaaaaatcg gaaaatagtc
    29641 tgacctatct gacataccaa gctggtctgg tctatgatgg tggtagtgag attgtcatta
    29701 gtccggaaaa tatttctaat ccagatttta gtaagatggc ttttacctac tttatcactc
    29761 aagatgattt caggaagttg ggcaatgact tgccagagct ggctgccaat caagttgcct
    29821 ttatgcgtcc gagcgaaaaa ccatcgctga agaagcttgt tttgggtggt cagacctttg
    29881 agaatgtagc caatcttgac caggctattt tccctgatat caccaatacg ctcaatgctg
    29941 ccgtcatggt ggttagtgat gatagtgttc tggaaaccat tcgtagttac tttgaagcaa
    30001 ataatccgca aggttatcag gttagtctgg actaccgtgt ctttaccgat ttgactgatg
    30061 aagaattggt tacagctggt attcttaatg aaaatgggga atatcttgga aatgttatgc
    30121 aacgtacgga tttcaacaat atgctcatgg gcttcacagg tggtttcctc tttacaggct
    30181 tcttgttggg cattagtttc ttgctaggtg ctgccttgat tatctactac aagcagtatt
    30241 cggaagggta tgaggacaag aaatcctaca agattttaca ggaagtgggc atgagccagc
    30301 aggctgtcaa gaaaacaatt aactctcaaa cgcttttggt cttctttatg ccattggcta
    30361 tggcaacctt gcattttgtc gtcgcccttg tcatgctcaa gcaaatgctg atgatgttcg
    30421 gtgtggtttc ctccagcatg atttacacgg ttagtggtat tacattactt gcagttgcct
    30481 tgatctactt tatcatctac aagtggacca gccgaaccta ttatcgcatt attgaacggt
    30541 agcagaagtc tcgcttatgc gggatttctt gattttttta ggaaatagtg ttacaatggt
    30601 aataccaaag gaataccaga agaggtgaga aaatggcagc tattacattg aaagtttctg
    30661 agcaggacaa gctttttatg caggctatgg caaagtttga aggtgtcagc ttgtcagaac
    30721 tcattcggac taaaaccctt gaagcacttg aagatgagta cgatgcgcgt gtggctgaca
    30781 ttgcacttgc agaatacgag gctgacttgg cgaatggcat tgagccgata agctgggagg
    30841 aaatgttgga agatttgggg ctgacggatg aagaccagtt ataaactcgt accaaccggt
    30901 cgttttatca aacagttgaa aaagctggac aaatttactc aaaagcagat taccaactac
    30961 ctgtctagtc atgtgaccga caaccctaga caatacggaa aagccttgac tgctaatcgt
    31021 tctggccaat ggcgctatcg tatcggcaat tacagggtta tcgtcagtat tgaagatgac
    31081 aaattgattg taacggccct tgaagtcggg catcggaaag aaatatataa atagaaagcc
    31141 aagacctgtg tcctggcttt tgtagaatga agatgatgaa aaaagaaaag atttatattg
    31201 ttgaagatga tgagatgatt gtccagctct tgaagcagca cctaggcaaa tcgtatcagg
    31261 tggaaagtgt gcagaatttc cgagctgtca gtcaggaagt ggcggaaatt aaaccagact
    31321 tagtgctgat ggatattagc ctgccttatt acaacggctt ttattggacg acagaaatcc
    31381 gtaaaaccat gaccatgccc attatcttta tctcctctag cgatgatgag atgaatgcgg
    31441 tcatggccat gaacatgggt ggtgatgatt ttgtttccaa gcctttttca ctagggattt
    31501 tggatgccaa aatcggagcc ttcctgcgtc gggtcaatca attcagcaaa tcaactgatt
    31561 tgtcaattga ccagtttcaa cttagtttag acggacgatt tacaaacgaa tcggaacagg
    31621 ttcaattgtc tcctacggaa accaagattt tgtccgcctt actagaacga caagggcaga
    31681 ttgttagcaa ggaagaactc ttggaaaaac tctgggaaaa tgaagaattt atcgaccaga
    31741 atacgctcaa tgtaaatatg accagactgc gtaagaaggt gagcgaagtc gggtttgaac
    31801 gaattcatac ggttcgtggc gtggggtact tggtcaaatg atagcaaaat ttatccgtga
    31861 ataccggagt ttttacttct cctacattgt tctggctact agttttatct tgcttttctt
    31921 tctctatcaa ctgcccaccg aattcctgca aaacgctctg ctattgtccc taaccttctt
    31981 aatccttctg actgcagggc ttttttggaa atttcgcaat cgcatgagag ccttagaaga
    32041 ctatgtccat gaagaagctc tgcccctgct taataagcct gtggacttgg cctatctcaa
    32101 cttgattgag gcagagaagg aggcgacacg agagcagctt ttggtctata agtcacgaga
    32161 agaagacctg caagctatgg tcaaaatgtg gtcccaccag atgaaagtgc cgctggctgc
    32221 cctgtctttg atgagccaga ctgataatct caaccagcag gatgtcaatc accagctctt
    32281 acgcttggac aattatatgg caaatctcct caattacctc aaactgacca accatgccag
    32341 tgattttcgc tttgaacagg tggaagtaag agaagtagtt gtggacttgg tcaaaaaata
    32401 ccgcaatcag ttcttgcaaa aagacatttc agtgaccatc gatggaaatt ggttactgaa
    32461 aaccgacaga aagtggatca gttttgccat atcacagatc atcgacaacg ccctcaagta
    32521 taataagtct ggtggcaagg tgacaattga gctgaatgag ggaatttcca tttccgatac
    32581 gggaattggg attctagccg aagacattcc acgcctgttt gacgagggat ttacaggttt
    32641 taatggccgt gaacaccaaa aagccacagg atttgggctc tatctgacca agcgggtctt
    32701 gtatcagttg gaactagcta tttccgtgga aagtcaactg gatgttggta caactgtaag
    32761 catcactaaa gtacagtaaa agctgtgctt ttttcgtttt gaaaccgctt taaaaatatg
    32821 atatactaaa tttatactca atgaaaatca aaatcagact aggcgacgaa gatgcagata
    32881 gaactgaagt tcatcaaatc aagtcaacaa cgtctgcttt tgattttcga agagtattag
    32941 tttgaattag gaggttacta tgtcccatca tcacgtcttg caaaatggat cagatattcg
    33001 tggaattgct atcgctacag acgaatatgc tgtcaatctc actccacagg ccaccaagga
    33061 agtggttcgc ggacttatcc attggctaac tcagaagcca gaactggcgc aggcctatca
    33121 aaatggccaa ttgaccatcg gtatcggtcg tgacagccgc ctcagcggtc cagatttggt
    33181 ttcagccttt acagaagaag ctgttcgtct gggcgttcag ctgattgact ttggcatggc
    33241 caccacgcca gctctcttca tgagcaccca gtatccgcag ttcaagtgcc acgctggtgt
    33301 catgatcact gccagccacc tgccctatta cttcaacggc attaagattt tttcggaaaa
    33361 tggcggagca gaacacgaag atattgactt catcctctcg catagtgaag acttgccagc
    33421 ttcttccctt ggaagtatca ccagtgcaga cctgattacg ccttatgccc aagacttggt
    33481 tggtaaaatt cgtaccgcct gtggtggaca agaaaaacca ctgacaggtc ttaatatcat
    33541 cgttgatgct ggaaacggtg caggcggatt ttttgctgag aaagttttgg cagaactggg
    33601 agcagatacc acaggctcac aattcctaga cccagacgga accttcccaa accatgttcc
    33661 aaacccagat aacaaggaag cgatggaaag cattcgccag gccgtcttga agcaaggggc
    33721 agatctaggc attatctttg atacagacgt tgaccgtgcc gccctggtca ccaagtcagg
    33781 agaaattctc aatcgtaaca acctgattgc cgttctcagc cagattgtcc tagctgaaca
    33841 tccaggaacc agcattgtga ccaattcccc aacaactgaa caccttaaag tctttataga
    33901 aagcctgggc ggcaaacaaa ttcgctatat ttcaggctat cgcaatgtga ttaaccgtgc
    33961 tattttagca aaccaagagg gagttgattg ccagttggct atcgaaacct ctggacacgc
    34021 tgcctttaaa gaaaattact ttcttgatga cggaacctat gtggcggcta agattctcat
    34081 gctcttacca aaactgcaag cggaaggcaa gtctttggac gacttgattg cccagctcaa
    34141 acaaccgctt gaaacccaag aagtgcgttt caaactagaa gtggcagact atcgagcact
    34201 gggtgaacag gtcattgctg atctccgtca aaccactatc caaggctttg cttttaaccc
    34261 agagaacgaa gaaggagtgc ggtttgacct gactgagcct tatggtgacg gctggttctt
    34321 gctccgtatg agccttcatg agccactttt agtcctgcag gtggagaatg accagactgg
    34381 gcatatacct gttgttttac gcaccctctc agcctttttg gaccagtacc cagcagtcaa
    34441 tcaggaaaaa ttgaaagaat tgatttagat ttagtagaaa aggagtaaat ttgagcttac
    34501 tccttaattt atttacataa tttaatttac gcaacatcac aactgatcaa gagcattttt
    34561 ctgctcatcg ttgacgatat gagtgtagag gtcggtgacc tgggtattgg cgtggcccag
    34621 ctgatgactg accagaactt gtgacttggt ggcgtcgtag agccgtgttg ccagcgtgtg
    34681 acggagtttg tggggtgtca cacgtatctt gaagtccgca gagtacttag ccaccatttt
    34741 ttcaatagaa gaagcgtcga tacgattggg cagaccgcgg tattcggata agaagaaggc
    34801 tgtatccgtt ttttcagcct tgtagcgttg ctgacgaatg ctcatatagg cttccagata
    34861 gggcttagca aacccagcta cattgaccga gtcccgttta ccacccttac gggttacttc
    34921 gatcatcatc atattgaggt ttacatctcg aaggtccaaa ttaaccgctt ctgacagacg
    34981 gacgccagaa gccaagagaa gtgccagaat cgccaaatcc cgctccttat ttttctggaa
    35041 ggaggagagg gcacgtttgg ataactttac ctggtattct ttatcgacat agtccaagaa
    35101 ctccatcgtt tcattgccca aaaagagctt ttgcttgatg ttctctgccc gcgctgccaa
    35161 agtttccttc ttcttcttgg tggacacctt cttcatgaca ttgcggtaga agtagggctc
    35221 gccctgctca ttttccactt cttcggttaa atacttgaag agactagaaa gggccgagag
    35281 ggtacggtta atggtggtct gcgacacacc attctgcgtg gtattggcgt tcagcaaggg
    35341 acgctcccgc agatatagaa taaaggactc catatctttt tttgtcagat gttccagaac
    35401 atccagcgga atgtcagcaa ttcgttcaac agctaccaaa tctgaatcct gtaaccactc
    35461 aaaaaaacga cggtattctt tcaagtattc gtacaaggtt gtaaaactgt aaggcacaga
    35521 caacttggac tgataatatt ccaaaacata ccaaggcata atttctttca gctgatcaat
    35581 tttttccaat aataactcgc gtctcatcat tttctcctga tt
//
LOCUS       DBNFCX010000013        34071 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.013, whole genome shotgun sequence.
ACCESSION   DBNFCX010000013 DBNFCX010000000
VERSION     DBNFCX010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 34071)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34071)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34071
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.013"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(245..1849)
                     /locus_tag="AC1PJC_000517"
     CDS             complement(245..1849)
                     /locus_tag="AC1PJC_000517"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HIP6619544.1"
                     /translation="MTKYIFVTGGVVSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYI
                     NIDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFIDINLNKYSNVTTGKIYSEVLRKE
                     RKGEYLGATVQVIPHITDALKDKIKRAARTTDADVIITEVGGTVGDIESLPFLEALRQ
                     MKADVGSDNVMYIHTTLLPYLKAAGEMKTKPTQHSVKELRGLGIQPNMLVIRTEQPAG
                     QGIKNKLAQFCDVAPEAVIESLDVEHLYQIPLNMQAQNMDQIVCDHLKLDVPPADMTE
                     WTAMVNKVLNLQKKVKIALVGKYVELQDAYISVVEALKHSGYANDAAIELDWVNANDL
                     TAENVAERLGQAQGIIVPGGFGQRGTEGKIQAICYARENDVPMLGVCLGMQLTCVEFA
                     RHVLGLEGANSFELDPETKYPIIDIMRDQIGVEDLGGTLRLGLYPSKLKRGSKAAAAY
                     DNQEVVQRRHRHRYEFNNDFREQFEKAGFVFSGVSPDNRLVEIVEIPENKFFVACQYH
                     PELQSRPNRPEGLYTAFVSAAIENEK"
     gene            complement(2042..2623)
                     /gene="rpoE"
                     /locus_tag="AC1PJC_000518"
     CDS             complement(2042..2623)
                     /gene="rpoE"
                     /locus_tag="AC1PJC_000518"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed RNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit delta"
                     /protein_id="HIP6619545.1"
                     /translation="MELNVFAGQEKSELSMIEVARAILEERGRDNEMYFNDLVNEIQN
                     YLEKSNSEIRAALPTFYSDLNVDGSFIPLGENKWGLRSWYAIDEIDEEVITLEEDDED
                     APKRKKKRVNAFMDGDEDAIDYGHDDPEDEDNYPGSASSEYDDENPDDEKDEVESYDS
                     EINEIIPDDELDEEDVDLGEDDDEYSDEEVVDE"
     gene            complement(2751..5906)
                     /locus_tag="AC1PJC_000519"
     CDS             complement(2751..5906)
                     /locus_tag="AC1PJC_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pneumococcal-type histidine triad protein"
                     /protein_id="HIP6619546.1"
                     /translation="MKKKAVVGSVAALVLGMSLCSYQLGRFQAMEEQKNRVSYIEDSQ
                     SVQTTVAEQLTPDQVSAKENIDAEQIVVKITDQGYVTSHGDHFHYYNGKVPFDAIFSE
                     ELVMKDPNYVLQDSHIINEVQDGYVIKVDGKYYLYLKDPSKHKNVRSKEEVERQKGIS
                     SADSKNQAAGNSKDGRYRTDDGYVFNPTDVIEDTGDGFIVPHGDHFHFIPKKDLSATE
                     LKAAQDYWNQKGSVSSASGSQYGDRNNRAQQTTISAGQGQDLASLLAQLDATPLSQRH
                     VEADGLVFDPRTITKKTAAGVIVPHGDHYHFIPYSQMSPLEEKISRMIGVNGAGVSSG
                     AQASHSQHTPTQPNRPVTPIGTVTTQPVSPTQPVLPTQPKQSTGKVVSYMGRQIPAYG
                     KGLDGKAYFTSDGYTFSKDSITSVDDQGLIASHGDHFHYVGFGELEDFEIKQVEEWVN
                     EKAGKQVPPKTSEQVGNDAKPTTPSQGNDSKPVKPIQEENRPAFEYKQVTAKRKLAGK
                     VVYEMEVGGKTYTYGRDELDLMKISFAELTLAEKDKQYIFDIAPLAEGDLKPAMLVGM
                     DQIPMKGANATYDTGQSFIIPHIDHIHVLPYTWLSKEQIATIRYIMQHPEIRPSAWTT
                     SGHGDGEATDLVPPILNATPKANRLGLKNWQIIHTAEEVMDARAKGKFATNDGYIFSA
                     EDVLDPASFVFSQAFSLPRATGGSLRSISKKDLSKEELEAVQTLLDKRDAEELAKNVT
                     PIEKRAGLKNWQIVHSAEELAEAKAAGKYTTKDGYIFDPADLLDPKVKIGTDNYRIPR
                     VITDGYRRINKSDLNYLSELIPAEAMVAQREKSNSSSPSTPAPTETGASAGETPTPEQ
                     PQVAKETAEEIYNRVEAKKVVPFEALTYNAGYATEVRNGTLVIPHQDHYHYVSFKWFD
                     QGSARSPEGYSLEDFLATVKYYMTNPQERPVSDDGWGVFTPNTPSESTEETETEESDE
                     EIISEETEEIDEFTEELKRRAEEFGMDFKTFEQSLVILSDRYKVSFEAFEYDATSKVV
                     RLVDKDGVKRTISLPSLEEQV"
     gene            complement(5940..6860)
                     /locus_tag="AC1PJC_000520"
     CDS             complement(5940..6860)
                     /locus_tag="AC1PJC_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000744917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter solute-binding protein,
                     Zn/Mn family"
                     /protein_id="HIP6619547.1"
                     /translation="MLKKVIRGCFVALFGFVLAACSAQKEASQVQSGMKIVTSFYPIY
                     SLVKEVSGNKNDVRMIGSRQGIHSYEPSAADIKAIYDADVFIYHSRILESWAGRLEPN
                     LQGSSVKVLEASTNLPLTKVPGLEDMEAGQGIDEASLYDPHTWLDPVLVGQEAVAIGE
                     LLAESDPKNADYYRQNAATLEEKAQKLADKYSPIFLKATSKTFVTQHTAFSYTAQRFG
                     LKQLGIAGVSEEEPSPRQLAEIKEFVDTYNVQTIFTEKGASDKLAKALASSTGVDLKV
                     LDPLEADPENNLTYLENLEQVLETLAQELK"
     gene            complement(6969..8366)
                     /locus_tag="AC1PJC_000521"
     CDS             complement(6969..8366)
                     /locus_tag="AC1PJC_000521"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012515460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006486 - protein glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HIP6619548.1"
                     /translation="MAWLSIFLTISRFLFLTYLVLYASFLLLSVVTGGIHLHERYRKR
                     RRKLEESEGNYPPISILVPAYNEEVTIISTIESLLKLDYPVYEIIVLDDGSKDQTAKL
                     VREYFQMKDSQRKIDYKLSCRPYHRISEQEFGSVCLTLIEKENGGKGDVLNLGINAAK
                     HEYFLCIDADSMLQRNSLKNLVRPMQKWENVISVGGVVQVSQGVRITDGEVSHYQLPW
                     SVLPCLQAIEYDCSFLGSRILLDYLQSNLIISGAFGLFYKEYVIAVGGYDRQTLGEDM
                     ELVMKLHYFCRNNNIPYRICYETSAICWSQAPSSIGDLCKQRRRWFLGLYQCLKKYRK
                     MLSRVRFGAVGYFSYAYYMLFEFLAPFIETLGCFVILLSLIYHQLNISFFISLFFLYS
                     AFCSLITFASFLQRVYSQDLFIGPMDLCKAFLATLFRYFFLHWVLNIVRLTSFIGYKK
                     RKREWGEIKRVKQFV"
     gene            complement(8505..10649)
                     /locus_tag="AC1PJC_000522"
     CDS             complement(8505..10649)
                     /locus_tag="AC1PJC_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017647451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619549.1"
                     /translation="MKKYLIVVSILVCILTVGYYLYYFDGSLYIPKVYSEETINYTFQ
                     VRNQELVRKTRGGEHPFIVKGVTIDSGIAGYHQNDFAIGEKRYLSWMKSISDMGANTI
                     RVKTIMDVDFYVALDKHNRQSDKPLYLLQGVRVDDVRDNTAIDAYHPQYRGRLLEDVK
                     DAVDVIHGRRKVWNTDLGSHYYRKDVSKWVLGFIVGDQWNGSTVAYTNHQVKQTSYKG
                     EYISTGQTATTFEAMLAEVLDEMVVYETKKYGWQHLVSFASSTLTDPFIYRKPFAAQA
                     SKYAQLNVENLLVSDRLRTGVFASYQLLDYHPKALDYLGENPSLSIEDVTKIKKENYP
                     ENYVGLLTHYHQVPVLISGYGYSTSRAITALNQGGIEGPLTETQQGEMLIRDFRAFLK
                     TGAVGGIIESWQDDWGARTWNTAFTTDRHSRFQWGDAQSNNQGFGLMAFENRVKNHSL
                     DGSLEEWKKQAITENNGNKLLVDGDESYLYLAIQKTAVKTDGANRWLIPIDITPKTGS
                     MEWKAEGVNFLGGADFLLAIDGESNSRLLVQERYDAVRANYLKQTSGSDPFVDIPKKD
                     SPHFTTASLVLKHNRIFEDLEKAEREDKWNPLYETGRLRSGNSQRGAKEFDSQADIYF
                     GEKVIEIRIPWQLLNFSNPSQGRIHDDYYQHYGVSEIAIDSIRLGLGEWKKGEYIRME
                     NYRLEKWNRPTVEGVLKTSYTMLKDYWKEEEK"
     gene            complement(10658..12100)
                     /locus_tag="AC1PJC_000523"
     CDS             complement(10658..12100)
                     /locus_tag="AC1PJC_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012678088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CotH kinase family protein"
                     /protein_id="HIP6619550.1"
                     /translation="MKQKILYYLVFIGLLLGVFSLQMLDLKQHKERFYHHKVSISAQP
                     VSPVEHLASHLPIIEIDTLDGKLIPLERGENEGGTRQQSVRGTVRLYDKLDEVNRVGD
                     GARVETLAEIAYRGNSSRHFDKKSIKLRFVDKKGEDVEHTVAGMPKESEWVLHGPFLD
                     RSLLRNYISYNLAGELMEYAPNVRYSEVMINGEYQGLYLIVESIEQGVHRIPVEKSDK
                     RSLKTSYIAVWDRPHKAKNPVDNYVGYTYQADQSSLDIRYPNVRKITEAQKDFIQQDI
                     SKIERILYSYDLKQYGHYVDKNAFATYFVINEFFRNTDAGIFSTYLYKDLRDKMKIAV
                     WDFNNAFDNHSDVEYDRAGFSMLEVPWFSMMIKDKEFIDLVVHKYHQLRKNLLSTKRL
                     HDHIDKTVQFLGPAIQRNNDKWGYVFQLQKMDEHNYLQPYERNQASYEEAVHVVKSFI
                     ENRGKWLDEHIETLYQYCAPSKNTNTLVDY"
     gene            complement(12107..12784)
                     /locus_tag="AC1PJC_000524"
     CDS             complement(12107..12784)
                     /locus_tag="AC1PJC_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017650973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4956 domain-containing protein"
                     /protein_id="HIP6619551.1"
                     /translation="MKDLLRNILEQHGTLTIQDMIMHIVVAAILGGVIYVSYAYTHAG
                     TTYSKKFNISLMTLTVLTATVMTVIGNNVALSLGMVGALSVVRFRTAVKDSRDTTYIF
                     WTIVVGICCGVGDYIVAMIGSSVIFLLLLIWGRVKNENRMLLIVRANRELEVPLEGLF
                     FQYFNGHVVQRVKNTKADMLELIFEVNRRVYDKYYSADNSLVEQVYQLGEVDYFNVVT
                     QSDDING"
     gene            complement(12797..13492)
                     /locus_tag="AC1PJC_000525"
     CDS             complement(12797..13492)
                     /locus_tag="AC1PJC_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001006716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate polymerase domain-containing
                     protein"
                     /protein_id="HIP6619552.1"
                     /translation="MNEVLRKEKKYLLPLEMYYYLSGKLEKILKVDGYGKADGYCVRS
                     LYFDSLEDVDWQEKEDGLENRRKIRLRNYGNGSQNAKLELKQKQGDNQRKRSLLMTKS
                     DAMSLVEGNTSVLLTYPDKLATELYCRMNQYCYKPKTIIEYRRKAFISPENDIRITFD
                     FQVRGTEASYDIFNNHLLQYSLLDPHLVILEVKYNGFLLSHIKDLLAEVDGSELSASK
                     YCMGRMISKHYRF"
     gene            complement(13780..14466)
                     /locus_tag="AC1PJC_000526"
     CDS             complement(13780..14466)
                     /locus_tag="AC1PJC_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003100329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HIP6619553.1"
                     /translation="MNSKLYHYIPLVDFLAQILGKKTEVVLQDFSQGLDHSLIYIKNN
                     LSGRDIGAPATDFVLDVLQSKVYKEKDYLVNYRTKTLGGKELYSSSFFIKDDAGELIG
                     MICVNADKSKMLTLKRLFESALEDVNEELANEQVEHEEPNIVENFYTTAGSMIEAAIE
                     QETHGKDVERFKLSRTEKIAVVRSLYQKGFFDFKDAIPQVATAFKMSEVSIYKYIQII
                     KNEANGFVDN"
     gene            complement(14527..15924)
                     /gene="pepV"
                     /locus_tag="AC1PJC_000527"
     CDS             complement(14527..15924)
                     /gene="pepV"
                     /locus_tag="AC1PJC_000527"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF005591.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016805 - dipeptidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase PepV"
                     /protein_id="HIP6619554.1"
                     /translation="MNWLNEIKKYEEELLQDICDLVSINSVRDDSLASEECPVGPGPK
                     CALYAVETLLNETGLNTEIIDNLVVQADWGGSDEVIGIMGHVDVVAVGEGWLSDPFVP
                     TLREGRLYGRGVLDDKGPLVCAIFAIKILQRLGINPKKTVRFIIGSDEESEWKCMEAY
                     QKYRSFPKVGWVPDAYFPVIHGEKGTSILQITTGSVNRPDFYLKEFRAGMQVNMVPDK
                     AVVVLEAEEPEKISQAFYRFINDYSGIAGEVCRREKNVTLTLLGQSAHGSKPFLGENA
                     ATHLARFLDAYSRAPTNQQDFLLLLADCHEDSFGESFGIAYQDPEMGKLTVNVGQVSY
                     TKEAGGLISCDCRYPKGIEFSRIQTLVASKLGECFQVTGYEKLSPHFVSPSSELVQCL
                     QNVYRDQTGGQEAPLVIGGATYARLMEEGVAFGALFPDREDTMHQANEYMEVEDLLRI
                     VAIYSETIYNLACSC"
     gene            complement(15989..17125)
                     /locus_tag="AC1PJC_000528"
     CDS             complement(15989..17125)
                     /locus_tag="AC1PJC_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011017287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016846 - carbon-sulfur lyase activity
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trans-sulfuration enzyme family protein"
                     /protein_id="HIP6619555.1"
                     /translation="MKDNTRLLHGYPVLDEYTGAASIPIYQTSTFHNSELYCDHQKYL
                     YTRFSNPTTDALESGLACLEQATFAIAFASGMAAISNVLMLLEAGDHVIFPIEVYGGT
                     CQFATKILPQYGISTSFVDMADLDQVRKVITDQTKMLYIETPSNPLLKVVDIRALVEV
                     AKENGLISVIDNTFMTALYQRPLELGVDIVVESVTKFINGHSDVVAGLIATNNEEYYH
                     KLKLFQKNFGGIVGVEDAWLILRGMKTMGLRMKQSVHNAQTIADYLVSHPKVKKVHYP
                     GLVNHPNHSVQMRQAANGGAVLSFEFYSKEDMLAFTKMIKIPILAVSLGGVESILSHP
                     ATMSHACLSEEERAEQGISDSLLRLSCGIEDVEDLLADFEQALA"
     gene            complement(17129..17509)
                     /locus_tag="AC1PJC_000529"
     CDS             complement(17129..17509)
                     /locus_tag="AC1PJC_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018373217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019239 - deaminase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rid family detoxifying hydrolase"
                     /protein_id="HIP6619556.1"
                     /translation="MVERISSEKIPAAVGSYSAASKVGNLIFTSGQLPINVETGKIDQ
                     PESIEWQVAQSLRNVQAILEDNGSSMKNIIKTTVYLDNIEDFASFNAVYQTFFDGDYP
                     ARTAFEVGRLPFGALVEIEAIAEV"
     gene            complement(17537..18934)
                     /locus_tag="AC1PJC_000530"
     CDS             complement(17537..18934)
                     /locus_tag="AC1PJC_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015171 - amino acid transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HIP6619557.1"
                     /translation="MKKKLGFYSIVLLTINSVIGTGIFLSPGTVVASTGQQALLVYLL
                     AAVFASVLAITFAAAAKYVSKGGAAYAYAKAAFGDNVGFYVGITRYIAASIAWGVMGT
                     AVVKTVLGIFGLDNTNMTYITLGFICLMAVLLLVNIFGTRIFEVINNLSTIGKVGALV
                     TTIVVGLAIVLFGNVNQFGTISSIMNSAGEPLGSNLDMGAYCMAIIAAFYAFTGFESV
                     ASGSEDMEAPEKNLPRAIPLAIAIVAAIYIGIVGVAMMINPEAIVSTTEVVALAEVFD
                     NNIIRSMIVIGALVSMFGINVAASFHTPRILEAMALQGQIPSAFTKRTENGFPLTSFL
                     ITIGIAILLPMAFGFNMSSIIVLSSISRFIQFIIVPLAVIIFYLGKERGEALQDVKKN
                     PVVDVFIPGLALAFTLLLLYKFSWAQQFTITLENGEVVANVFAITAMVIGYVILPIVL
                     MIWKNNQTKVATATN"
     gene            complement(18953..19729)
                     /locus_tag="AC1PJC_000531"
     CDS             complement(18953..19729)
                     /locus_tag="AC1PJC_000531"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010490141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HIP6619558.1"
                     /translation="MESKCSKPIIGISASIIVDSGGMFPGYHRAYVNEDYVNSVIRSG
                     GIPLIIPISQDETVIDGYIGSIDGLILSGGHDVNPLNYDEEPDQKLGDIFPLRDWFDS
                     QLLQKAKEKRIPILGICRGCQILNVSHGGSLWQDLSYAEGVTIKHWQAHHPDLATHSI
                     EIEEDSVLYHVLGEKKVMVNSFHHQVIRKVGDGFRVVARARDGVIEAIESTDYPFMIG
                     VQWHPEMLHHCDAGMCRLFKALVEAAQGMSSEKILYEMAV"
     gene            complement(19913..21196)
                     /gene="tig"
                     /locus_tag="AC1PJC_000532"
     CDS             complement(19913..21196)
                     /gene="tig"
                     /locus_tag="AC1PJC_000532"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016466710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HIP6619559.1"
                     /translation="MSVSFEAKETNRGVLTFTIGQDAIKPELDRVFNKVKKDINLPGF
                     RKGHLPRAVFNQKFGEEALYQDVVNALLPAAYEAAVAEAGLEVVAQPKIDVVSMEKGQ
                     DWTITAEVVTKPEVKLGDYKNLAVSVEATKEVSDEEVDAKIERERNNLAELVIKEGPA
                     AEGDTVVIDFVGSIDGVEFDGGKGENFSLGLGSGQFIPGFEAQLVGHAAGEEVNVEVT
                     FPEDYQAADLAGKPALFVTKIHEVKAKEVPALDDELAKDIDEEVETLDELKAKYRKEL
                     EAAKEVAFDDAVESAALELAVENAEIVELPEEMIHEEVHRAINEFLGGMQQQGISPDM
                     YFQITGTTREDLHKQYEADAEKRTKTNLVVEAVAKAEGFEATEEEINKEIEDLAATYK
                     MEVAQVRSLLSPEMLKHDIAVKKAVEVITSTATVK"
     gene            complement(21418..22437)
                     /locus_tag="AC1PJC_000533"
     CDS             complement(21418..22437)
                     /locus_tag="AC1PJC_000533"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HIP6619560.1"
                     /translation="MKKFKKIILWILGIVASLGLIAYVSVTNHPQLVVGVIQSFMYKE
                     SSPNSYSPLYDPIDGLKENGQYLKSEIAYSKEYPNSFLDITYPDQNLEADRPTLFYFH
                     GGGFFGGSKNMVDPLAASQATYLIYDIVSKGYNVVNVDYALVPDHHFPTPVIQMNQAI
                     AYIKEHAEEYHLNMDNIVLMGSSAGAIMVAQYGSLLANNDYAQQLNIEPSIAKEDVKA
                     LVIDDAPLDYAKFSLSTKILVGNYVSETIYLSEEEINAYNPIPHVNKDYPASFLLGSE
                     YRTDMVSLNKALQQAGVENELVDPLAEEGLEKPHGFVANLRTDPVSAKAFERMMTFID
                     DRTKE"
     gene            complement(22447..23565)
                     /locus_tag="AC1PJC_000534"
     CDS             complement(22447..23565)
                     /locus_tag="AC1PJC_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pectin acetylesterase-family hydrolase"
                     /protein_id="HIP6619561.1"
                     /translation="MKKVWKIVAAVTVVLALLGFIAYKKTFGWSAPELVAQTPQVNEW
                     YRLSPEGVVDSQGNQAHGLLRIGKEKNKVMVYFFGGGVSINEETASGGTRYFATTTGH
                     QDYVAKWGIGSSQEDNPFKDWTMIVLPYGTGDFHAGTQNFSYIDDNGKEQVVHHQGYS
                     NLMSILAAAKSHIGNPDTLLVTGFSAGGFATSLLADEVISQFPTAENVTVAVDSAFLR
                     HDNWKSIAENVWKTPTSISDRLHSDNIVLDSLVALHEKRGDSVKILFDISYRDGILQQ
                     YQAYIDQGKLADATEESSEHFQKELKKMIQELQSKIDGVGIFVWNYGQDEKTTATQHT
                     TINFSTFFTPMSQGKSVAEWLDDAVNGEVKSYGLELLD"
     gene            23708..24217
                     /locus_tag="AC1PJC_000535"
     CDS             23708..24217
                     /locus_tag="AC1PJC_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HIP6619562.1"
                     /translation="MEKVKRKESLFVESVVEALWELLEDKSFEKISVSELVERAGIGR
                     VTFYRNFSNKEEVLERSFNMELQAWLTERKIDLSDWSDAHLLLALRQFFDFWYEQQDK
                     IRLLTANHLDYLLEEVLDRYFKERLGDMTDDFHLQFIVGGFFRVLKTWVARGCKESPD
                     DIMRLMGEQ"
     gene            complement(24313..24465)
                     /locus_tag="AC1PJC_000536"
     CDS             complement(24313..24465)
                     /locus_tag="AC1PJC_000536"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619563.1"
                     /translation="MPDSYGVDLPRFVDEVVPILQERGLFHKDYEGETLRDHLGLDYQ
                     YGVRKE"
     gene            complement(24646..25005)
                     /locus_tag="AC1PJC_000537"
     CDS             complement(24646..25005)
                     /locus_tag="AC1PJC_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018163930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclophilin-like fold protein"
                     /protein_id="HIP6619564.1"
                     /translation="MTLTLSINHETLPVTWENNNAVQSLKTKLTDQSLTVNLSAYGGF
                     EQVGSLGFTLPSQDQQLRATSGDIMLYNSNNIVLFFGSNSWSYTKLGHIDLSQSELDK
                     LLNQDSVSITLSLSDAK"
     gene            complement(25168..25569)
                     /locus_tag="AC1PJC_000538"
     CDS             complement(25168..25569)
                     /locus_tag="AC1PJC_000538"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HIP6619565.1"
                     /translation="MKMATFWSHKVCLRSFHIFLKDNPVLTAFHNYYKTERGYHKRSV
                     NSTGAWTATTPQAFFNFPLVTNVEEMNRPMLLIAGENAHSRYYSEDVAKAAGDIAELV
                     IVPNADHVDLYDKVEKIPFDQLVSFFNQALS"
     gene            complement(25622..26164)
                     /locus_tag="AC1PJC_000539"
     CDS             complement(25622..26164)
                     /locus_tag="AC1PJC_000539"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HIP6619566.1"
                     /translation="MTNAYTFDLHDNVTRTSVRFKNRYGIELAGDLYQPKNTIGKLAA
                     LPVSGAFGAVKEQTSGFYANELASRGFVALAFDNAFTGESGGEVRNVASPDIFTEDFS
                     AAVDFLGGLDIVDRNRIGVMAICGLSGMAITAAINDKRIKAVATASMYDMSRSISKGY
                     ADNYSLADRNKIRDYLAAQR"
     gene            26260..26385
                     /locus_tag="AC1PJC_000540"
                     /pseudo
     CDS             26260..26385
                     /locus_tag="AC1PJC_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005233239.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family DNA-binding transcriptional
                     regulator"
     gene            complement(26630..29131)
                     /locus_tag="AC1PJC_000541"
     CDS             complement(26630..29131)
                     /locus_tag="AC1PJC_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017261612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HIP6619567.1"
                     /translation="MDYSYIPKAIQVRGARANNLKNVSLDIPLHQFVAITGVSGSGKS
                     SLAMDTIYAEGTRRYLNALSTYTRRRIKQVGRSDVDSVEYLPSTIALRQRPETPNVRS
                     TVGTLTETLNVVRLMFSRLASHVCPNGHRLEPTLRVAEVMDFIGSDERMGVLTCPTCQ
                     VEFMVYGAESFAFNSEGACPTCQGTGEGRQIQLDKIIPDPSLTINEGAVASWKLPGRT
                     HMKLVAEQQGVDLDTPFEQLSKKDQDIILYGPEVKEIIVVPTKTGKSFELNAKYENAI
                     VAVEHSLATAKNEKAIERLNRFYDMGPCPTCHGNRYNPDLLKSLILDKNIAEVSQYDL
                     LELTRFADQLVTWVPKEMEEMTLKLASELKELIEPIVALGLDYLTLDRAGNSLSTGEL
                     QRIQLARTIRNQMTGMLYVLDEPSVGLHAENVQALIAIIRQLIQQGNSVLVVDHDTAI
                     LEAADYLIEIGPLSGEQGGQVIGQGQPEIIRQDSQSVIAPYLNHTAKIRLRPEHDLAS
                     YKHFQVTVTNQHNIKEVTADFVENGLNLVTGISGSGKTSLILDGLLPGFEARIAKSKL
                     PSNVAITGGKSIKHVVEIDSTPIGKNVRSTVATYSKIMDKLRKIFDDLSTDFSATDFS
                     YNNKSGACDYCDGTGTVTLDVQYLPDMVETCPKCQGRRYKDEVLAVKWQGRSIADLLD
                     LTVSEALTVFAEEPAILVTLQVLEELGLGYLHLGESTPALSGGEAQRLKLATYLEKKQ
                     NHYLFIFDEPSIGLHPRDVGNLVLVFEKLIQSGATVIVIEHDLDVIANADNIIDMGPQ
                     GGRYGGQLVVNGSIADIIQTPTSTTSRYLKDYLGQ"
     gene            29130..29507
                     /locus_tag="AC1PJC_000542"
     CDS             29130..29507
                     /locus_tag="AC1PJC_000542"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HIP6619568.1"
                     /translation="MIHTPSDSLSLVFNDCHSTTDEKLKQELESYFTKTGTNLNSYTV
                     CYLLQDKENQELRISELVELLYLSTSATSRLVVKMEAETGLVVRETCEIDNRGLYVVL
                     TQKGRDFLTDASAAVEKLIQKAL"
     gene            29529..29879
                     /locus_tag="AC1PJC_000543"
     CDS             29529..29879
                     /locus_tag="AC1PJC_000543"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619569.1"
                     /translation="MRAQVIHNKYSSNIEYHHLFRGALILFFNRLQLNTSKSITISLV
                     YSPHHDRLVAFRNIFKVFQHHTIIKIPYLDQDADYVDQFGREFSGAELVHSSIHIPFA
                     ASDFQSYTLELSRT"
     gene            complement(29988..30116)
                     /locus_tag="AC1PJC_000544"
                     /pseudo
     CDS             complement(29988..30116)
                     /locus_tag="AC1PJC_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003059255.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            30171..30629
                     /locus_tag="AC1PJC_000545"
     CDS             30171..30629
                     /locus_tag="AC1PJC_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004270881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HIP6619570.1"
                     /translation="MPGKQGGYLILKIRLLNGRLFNHRLSKHPDALYTAEQGKILSAL
                     WANEPQSAKELSKVTGLATSSLSLMLKRLEDQGLIVSKTSFEDKRRKDYCVTPQGAQQ
                     QAVGDAVSREVSSVFYQGFSKQEIREFEGYLERILQNLERELGDDKREKP"
     gene            30607..31170
                     /locus_tag="AC1PJC_000546"
     CDS             30607..31170
                     /locus_tag="AC1PJC_000546"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004226405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HIP6619571.1"
                     /translation="MTRGRSHKGQSLIARLADYTVVDIETTGMAGNRAKLIEVSAIRV
                     RLHKPVAHFSRLINPHQRLSPFIKNLTGITDQMLSQAEELVPVLRDFVDFLGNDVIVG
                     HNVHFDVNFLYDNLEQHCGLTLTNDMVDTLRLSRRWLDLPRHRLDDLVAYYGFDIRTQ
                     HRALNDCLLTHQVYQALIAKGEIHDNL"
     gene            31157..31678
                     /locus_tag="AC1PJC_000547"
     CDS             31157..31678
                     /locus_tag="AC1PJC_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012961780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HIP6619572.1"
                     /translation="MTTYKDLLIDDLNRAYERFERAFEGVTVVQANAFPVAEFAPQVK
                     SMTWLLWHTAMVLDIQIAELAGTDWLYKQGWQDKLPKDDTTNPSWLHTLEEAQTITVD
                     SFDDLFGYFAAARDQAVAYIASLTEESLEDIVDESWIPAVTRGVRLVSTIDDVAMHSG
                     QFFYARRLLGLTD"
     gene            31688..33025
                     /locus_tag="AC1PJC_000548"
     CDS             31688..33025
                     /locus_tag="AC1PJC_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004270880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HIP6619573.1"
                     /translation="MAQTSLFDDNSRASMPLASRVRPQDLAHFIGQKHLVGKGKFLRE
                     MIDKDQVSSMIFWGPPGVGKTTLAEIIAKTTQSHFITFSAVMNGIKEIRKIMNEAEEN
                     RLLGQRTIVFIDEIHRFNKAQQDAFLPYVEKGSIILIGATTENPSFEVNSALLSRTKV
                     FVLKQLTESDIAELLRQVLSDEQAFPETTVHITDDVIKQIAIFSNGDARSALNTLEML
                     VINSEVVNQQVTISEDLVATLLDKKTSYYDKDGEEHYNIISALHKSMRNSDVDSAIYW
                     LGRMIDGGEDPVYIARRLIRFASEDIGLADNNALNLAINVMQACRYIGLPECDVHLTQ
                     CVIYLSLAPKSNASYKARVAVQKDIKQTINEPVPLQLRNATTKLMKEIGYGKNYQLAH
                     FYEDKLTTMKTRPDSIADHVYYQPTTEGNEARIKQRLEYIKEWKATHDTGFVD"
     gene            33526..>34071
                     /locus_tag="AC1PJC_000549"
     CDS             33526..>34071
                     /locus_tag="AC1PJC_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HIP6619574.1"
                     /translation="MTESAKTKLQQALILLLDKEEFGRISVSKICKEAGVHRSTFYHY
                     YDNQFDLLEDAYQYLTQLFLAEFQSYPANSLPIETDLTGDAYLISYLQFVKDHQKIYQ
                     IYLRHELDFHHKERFEHLVELIFTPRFHAQGIQNPVQIAYVSSFFLAGITQVVSKWVR
                     NGCAESIEEMADIIQICISRKQ"
BASE COUNT         9609 a         7664 c         6473 g        10325 t
ORIGIN      
        1 cttgtcaaca ctttttttga attttatttt ttatttttac cttttttgcc aaaacgtatt
       61 gatttagctg attcttttgc aatattctac tatatataat gcttaaaacc atctcgacaa
      121 tgatgccata tgggggtggt atttcgtatt ttcttctata aaatactgac acctttttcg
      181 tttctttata taaaatataa aagaagattg aataatacca atctccttct ataaattgtt
      241 atacttattt ttcattctct atagctgctg aaacaaaggc tgtatacaaa ccttcagggc
      301 gattaggacg agattgtagt tctggatggt attggcaggc aacgaaaaat ttattttctg
      361 gaatttcaac aatttctacc aaacggttgt ctggtgacac acctgagaaa acaaaacctg
      421 ctttttcaaa ttgttcacgg aagtcattgt taaactcata acgatgacga tggcgacgtt
      481 gtacaacttc ttgattatca taagcagctg cagccttgga gccacgtttg agcttgcttg
      541 gataaagacc taaacggaga gttcctccta aatcttccac tccaatttga tcacgcatga
      601 tatcaataat tggatatttt gtttctgggt ctaattcaaa gctgttagca ccttctaaac
      661 cgagaacgtg acgagcaaat tctacacagg tcagctgcat tcccaagcag acccctagca
      721 ttggcacatc attctcacga gcataacaaa tggcttgtat tttcccttct gtaccacgtt
      781 gtccaaagcc accaggaacg ataattcctt gtgcttgtcc tagacgttca gctacgtttt
      841 ctgctgttaa atcatttgca ttgacccagt ccaattcgat agcagcatca tttgcatatc
      901 ctgagtgttt tagagcttca actacagaaa tataggcatc ttgtaattct acatacttac
      961 caactaaagc gatttttact tttttctgga gattaagaac cttgtttacc atcgctgtcc
     1021 actctgtcat atctgctgga ggtacgtcga gcttcaagtg atcgcaaaca atttgatcca
     1081 tgttctgcgc ttgcatattt aatgggattt ggtaaagatg ttcgacatcc aaggactcaa
     1141 taactgcttc tggagcaaca tcacagaatt gtgccagttt atttttaatt ccttgtccag
     1201 caggctgctc tgtccgaatt accaacatgt tgggctgaat acctagacca cgcaactctt
     1261 ttacagaatg ttgtgttggc ttagttttca tttcgcctgc tgctttgaga taaggcaaga
     1321 gtgttgtatg gatatacata acattgtctg aaccgacatc tgccttcatc tgacgaagcg
     1381 cttcaaggaa tggcaagctt tcaatatcac ctactgtacc acctacttcc gtaatgatga
     1441 catctgcatc tgtagtacga gctgcacgct tgattttgtc tttcaaagca tctgtaatgt
     1501 gtggaataac ttgaactgtt gcccctaagt attccccttt acgctcttta cggaggactt
     1561 cgctataaat tttacctgtt gttacatttg aatatttgtt caggttaatg tcgatgaaac
     1621 gctcataatg cccaaggtcc aagtcggttt ctgcgccgtc gtccgtcaca aaaacttcac
     1681 cgtgttgata cggactcatt gttcccgggt caatgttgat gtatggatca aatttttgga
     1741 ttgttacctt gagacctcgg ttcttcaata aacgacctag gctggctgct acaatccctt
     1801 tgccgataga ggaaacaacg ccacctgtta caaaaatata ctttgtcatg caaactcctt
     1861 ttctacgatt caggctaata ggaagcaatt tatggggata cttcctgtta acttgaagaa
     1921 aaaacaaaaa tagctcccta tcgctaggga gctccgacct caaaagaggt gcccgatagt
     1981 atcttatcgt aatttggtag tcttgtcaaa ttatttttaa gaatctaggg ggatataatt
     2041 cttattcgtc gacgacctct tcatctgaat actcgtcgtc atcttcacct aaatcaacat
     2101 cctcttcatc caattcgtca tctgggataa tttcgttgat ttctgaatca taggactcaa
     2161 cttcatcttt ttcgtcatct ggattttcat catcgtattc tgatgatgca ctacccggat
     2221 agttgtcctc atcttctgga tcgtcatgtc cgtagtcaat tgcatcctca tcaccgtcca
     2281 tgaaggcatt gacacgtttc ttcttgcgtt ttggtgcatc ttcatcatct tcttcaagag
     2341 tgatcacttc ttcgtcaatc tcatcgattg cgtaccaaga acgtaagccc catttgtttt
     2401 cgccaagtgg aatgaagctt ccatccacat tcaaatcaga atagaaggtt gggagggctg
     2461 cgcgaatctc gctgtttgat ttttcaaggt agttttgaat ttcattgacc aagtcgttga
     2521 aatacatttc gttgtcacgt ccacgttctt ccaaaatagc acgggctact tcaatcatgg
     2581 aaagttcgct tttttcttgt cctgcaaata cgttaagttc caaggctgtt ctcctttttt
     2641 gtctttcctt tctattttac gctaaaaaag gcaaatagtc aaagataatc tttatcgttt
     2701 ttctgtaaaa aaaatacctg cagagctcag cgctacaggt attttgttta ctatacttgt
     2761 tcttctaaac ttggaaggga gatggttcgt ttgactccat ccttatctac aagtcgtaca
     2821 actttgcttg ttgcatcata ttcgaaagct tcaaaagaaa ctttgtaacg gtctgagagt
     2881 atgaccagac tttgttcaaa ggttttgaag tccataccaa actcttctgc tcttcgtttt
     2941 aattcttctg taaactcgtc aatttcctcg gtttcttcag aaataatttc ttcatcactt
     3001 tcttccgtct ctgtttcttc tgttgattca gatggtgtat ttggtgtaaa tactccccag
     3061 ccatcgtctg aaacagggcg ttcttgtgga ttagtcatgt agtatttaac cgttgctagg
     3121 aaatcttcta aactataccc ttcaggactt cttgcactac cttggtcaaa ccatttaaag
     3181 gatacatagt gatagtgatc ttgatgcgga atcactagag tcccgttgcg tacttcggtt
     3241 gcatagccag cattgtaggt cagtgcttcg aaaggaacga ctttcttcgc ttccactcgg
     3301 ttataaattt cctctgctgt ttctttggca acttgtggct gttctggcgt tggtgtctcg
     3361 cctgcacttg ctcctgtttc agtcggtgca ggtgttgacg gtgaactaga attagatttc
     3421 tcacgttgag ccaccatagc ctctgctggg atcagctcgc ttaagtaatt caaatcactc
     3481 ttgttaatcc gacggtaacc atctgtaatc acacgtggga tgcgatagtt atccgtacct
     3541 attttcactt tgggatctaa taggtctgct gggtcaaaaa tatagccatc ttttgttgta
     3601 tattttcctg ccgccttagc ttctgccaac tcttctgccg agtgaacaat ttgccaattt
     3661 ttcaaacctg cacgtttctc aattggtgtg acatttttcg ccaattcttc agcatctcgt
     3721 ttatcaagaa gagtttgtac agcttccaat tcttctttag ataaatcttt cttggaaatt
     3781 gaacgtagag aacctcctgt cgctcttggt agactgaacg cttgactaaa gacaaaactt
     3841 gctggatcta gtacgtcttc cgccgagaag atatagccat catttgtcgc aaatttccct
     3901 tttgcacgcg catccatgac ttcttctgct gtgtgaatga tttgccaatt tttcaagcct
     3961 aagcggtttg ctttaggtgt tgcatttaga attgggggaa caagatccgt tgcttctcca
     4021 tcaccatgtc cacttgtagt ccaagcagat ggacgaattt caggatgttg catgatatag
     4081 cggatcgttg caatttgttc cttactcaac catgtgtaag gtaggacgtg gatgtgatca
     4141 atgtgtggaa taataaagga ttgtccagta tcataggttg cattcgctcc cttcatcgga
     4201 atttgatcca taccgaccaa catggctggc ttaagatctc cttctgcaag cggtgcaata
     4261 tcaaagatat actgcttatc tttttctgcc aaggtcaact cagcaaaaga gatcttcatc
     4321 aaatctagtt cgtcacgacc atatgtataa gtttttccac ctacttccat ttcataaaca
     4381 acttttccag ccaatttacg tttagccgtt acttgtttgt attcaaatgc agggcgattt
     4441 tcttcttgaa ttggttttac aggttttgaa tcattccctt gacttggtgt tgtgggttta
     4501 gcatcgtttc ctacttgttc agatgttttc ggtggcactt gtttgcccgc cttctcatta
     4561 acccattcct ctacttgctt gatttcaaaa tcttcgagtt cgccaaaacc aacataatgg
     4621 aaatgatctc catgactagc tatcagccct tgatcatcaa ctgaggtaat agagtctttg
     4681 ctaaaggtgt atccatcact tgtaaaatat gccttaccat ctaacccttt tccgtaagca
     4741 ggaatttgac gtcccatata ggaaaccact ttccctgttg actgcttcgg ttgtgttggt
     4801 aatactggtt gtgtaggcga taccggttgc gttgtaaccg tgccgattgg tgttactgga
     4861 cgatttggtt gtgttggtgt atgttgggag tgacttgctt gtgcgccaga agaaacacct
     4921 gctccattta caccaatcat tcgagaaatc ttctcttcta gaggagacat ctggctgtat
     4981 ggaataaagt ggtaatgatc gccgtgtgga acgatgacac ctgctgcggt tttcttcgta
     5041 atcgttcttg ggtcaaatac caatccatct gcttctacat ggcgttgaga taggggtgtt
     5101 gcatccaatt gagccaataa actagccaaa tcctgacctt gccccgcact aattgttgtc
     5161 tgttgagctc tattgtttct atcgccatat tgactaccac tagccgagct cacacttcct
     5221 ttttgattcc agtaatcttg agcagccttc aattcggtag ctgataaatc ttttttagga
     5281 ataaagtgga aatggtcgcc gtgcggaacg ataaaaccat ctcccgtgtc ttcaataaca
     5341 tctgtcggat taaagacata gccatcgtct gttctgtagc ggccgtcttt actatttcct
     5401 gctgcctgat ttttgctgtc agcagaagag attccttttt gccgctccac ttcttctttg
     5461 ctacgaacat ttttatgttt gctagggtct tttagataga gatagtattt cccatcaact
     5521 tttatgacgt agccatcctg gacttcattg atgatgtgac tgtcttgtaa gacatagttt
     5581 gggtccttca tgaccaactc ttcactaaaa atcgcatcaa aggggacttt accattatag
     5641 tagtggaaat ggtcaccgtg tgatgtcaca tagccttgat cagtaatttt aacgactatc
     5701 tgctcagcgt caatattttc cttggcagaa acttgatcag gtgttaattg ttcagcaacg
     5761 gtagtttgta cactttgact atcttcaata taggacacac gatttttttg ctcttccatc
     5821 gcttggaaac gtccaagctg gtagctacag agactcatcc ctaaaacaag ggcggctacg
     5881 gagccaacaa ctgctttttt cttcattttt tctcctttcg gtcgatagaa ttcggccttt
     5941 tattttaact cttgagctaa tgtttctaag acttgctcta gattttctag ataggttaaa
     6001 ttattttctg gatctgcttc aagaggatcc aacactttta aatctacacc tgtcgaactc
     6061 gccaatgcct tggcaagctt atccgaggca cctttttctg taaaaattgt ttgcacattg
     6121 taggtgtcaa caaattcttt aatttccgcc aattgtctag gacttggctc ttcctctgaa
     6181 actcctgcga tccccaactg cttcaacccg aagcgttgtg cagtgtaaga gaaggctgtg
     6241 tgttgagtga caaatgtttt tgatgtggct tttaaaaaga ttgggctata cttgtctgcc
     6301 aacttttgcg ccttttcctc taaagttgcg gcattttgac gataataatc cgcattctta
     6361 ggatcacttt ctgctaaaag ttcaccaatt gcaacagctt cctgaccaac caaaaccgga
     6421 tccagccatg tgtgggggtc atataaacta gcttcatcaa tcccttgacc agcttccatg
     6481 tcttctaacc ctggaacctt tgtcagcggt aaatttgtcg aagcctccaa aaccttgaca
     6541 gatgaacctt gcaaattagg ttccaaacgt cctgcccagg attccaaaat tcgcgaatga
     6601 tagataaaaa catctgcatc gtatatggcc tttatgtccg cagccgatgg ttcataagag
     6661 tgtatgccct gtcttgagcc aatcattcga acatcatttt tattccctga cacttcctta
     6721 accagtgaat aaatcgggta aaatgaggtg actattttca ttcctgattg cacttgactc
     6781 gcttccttct gagccgagca agctgctaaa acaaaaccga ataaggcaac aaaacagcct
     6841 cttatcactt tctttaacat aacttcctcc tttgttaacc agttaactat atcacaagaa
     6901 tattaaccag tcaagtattt tttaaaaaaa gataagactt tctttttata agccagtctt
     6961 acctttactt aaacgaattg tttcactcgt ttgatttctc cccattcacg ctttctcttt
     7021 ttatatccaa taaaacttgt cagacggaca atattcaata cccaatgcaa gaaaaaatat
     7081 ctaaacaagg ttgccaggaa ggctttacac aaatccatag gtccaataaa taaatcttgc
     7141 gagtagacgc gttgcaaaaa tgacgcaaag gtgattagtg agcaaaaagc actatagagg
     7201 aaaaagagcg atatgaaaaa tgagatgttt agttgatgat agatcaacga cagtagaatc
     7261 acgaaacaac cgagagtctc tataaacgga gccaaaaatt caaatagcat atagtaagca
     7321 taggaaaaat atcccaccgc cccaaaacga actcgcgata acatttttcg gtattttttt
     7381 agacattgat agagtcccaa gaaccagcga cggcgttgtt tgcataaatc accgatagag
     7441 ctcggtgctt gactccaaca aatggcgctg gtttcatagc agattcgata aggaatattg
     7501 ttatttctac agaaataatg caatttcatg actagctcca tatcttctcc cagtgtctgc
     7561 ctatcataac ccccaactgc tatgacatac tccttgtaaa ataacccaaa ggcacctgat
     7621 atgatgagat tggattgcaa atagtccaat aaaattctac tccctaaaaa agaacagtca
     7681 tattcgatag cttgtaaaca ggggagcacc gaccacggca actggtaatg actgacctct
     7741 ccgtcagtta ttcgtacccc ttgtgaaact tggacgactc caccaacaga tatgacattc
     7801 tcccatttct gcatgggacg gacaaggttt ttcagagagt ttctttgtaa catcgaatct
     7861 gcgtcgatac ataaaaaata ttcatgcttt gctgcgttga taccgaggtt aagaacatcc
     7921 cctttgcctc cattttcttt ttcaatcaat gtcagacaga cagaaccaaa ctcttgttct
     7981 gagattctgt gataaggacg acaagaaagc ttgtagtcaa tttttcgttg actgtccttc
     8041 atctgaaaat actcgcgaac tagttttgct gtttgatctt ttgaaccgtc atctaataca
     8101 atgatttcat agacaggata gtccaatttc aataaggatt ctatggtgga aataatagta
     8161 acttcctcgt tgtaagctgg gaccaatata gatatcggtg gataattgcc ctcactctcc
     8221 tctagcttcc tccgtcgctt tctatagcgt tcatggagat ggatacctcc tgtcactaca
     8281 gaaagcaaca aaaagcttgc gtacaacacc aggtaagtta aaaataagaa gcgtgaaatt
     8341 gttaaaaaaa tgcttaacca agccatcctt gtccccttct aatcagcgct tacgctcgac
     8401 cattcgtggt ttcttataaa aaagtctacg tttgataata taagccatat taaagattaa
     8461 aatagcaatg caaataataa tataaaagta caacacatta tgtatcattt ctcttcctct
     8521 ttccaatagt cttttagcat ggtgtatgaa gtttttagaa ctccttctac ggtaggtcta
     8581 ttccattttt ccaagcgata gttttccatc cgaatatact cccctttttt ccactcacct
     8641 aaaccaagcc ggatagaatc aatcgctatc tccgaaacac cataatgttg ataatagtca
     8701 tcgtgtatcc ttccttgtga gggatttgaa aaattcaaca attgccacgg aatccgaatt
     8761 tctataactt tctctccaaa gtaaatatcc gcctgcgaat caaactcttt tgctcccctc
     8821 tgactgtttc cagaacgtag ccgtcccgtt tcataaagcg gattccattt atcttctcgt
     8881 tcggcttttt ccaagtcttc aaaaatccga ttgtgtttca atacaagcga tgccgttgta
     8941 aagtgcggtg aatctttttt aggaatgtca acaaatgggt cacttccgct tgtttgtttg
     9001 agatagttag ctcgaactgc atcatatctc tcctggacca ataaacggct gttgctttcc
     9061 ccatctatag ctaagagaaa atctgcaccc cctaaaaagt tcactccttc agccttccat
     9121 tccatactgc cggtcttcgg tgtaatatca ataggaatca gccaccgatt tgcaccatcg
     9181 gtctttacgg cagtcttttg aatagctaaa tataaataac tttcatcccc atcaacaagt
     9241 aatttattcc cgttattttc agtaatagct tgctttttcc actcctcaag cgagccatca
     9301 agactgtgat tctttactcg attttcaaac gccatcaagc caaagccttg attatttgat
     9361 tgagcatctc cccattggaa acggctatgc cggtctgttg taaatgctgt attccaagta
     9421 cgagcacccc aatcatcttg ccaggactca ataattccgc ctacagcgcc cgtctttaaa
     9481 aatgcacgaa aatccctaat caacatttct ccctgctgtg tttctgttag gggaccttct
     9541 attcctccct gattcagggc tgtaatggct ctagaagtcg aataaccata gccagagatc
     9601 aagacaggaa cttgatgata gtgcgttagg agaccgacat aattttctgg gtagttttct
     9661 ttttttattt ttgtaacatc ttctatcgaa agacttggat tttccccaag gtaatcaagt
     9721 gctttagggt gatagtccaa taattgatag gaagcaaata cgcctgttct taggcgatcg
     9781 cttaccaata gattttcaac gtttaattga gcatattttg aagcttgcgc tgcgaagggt
     9841 tttcgataga taaacgggtc tgttagggtc gaactggcaa aactgaccag gtgttgccag
     9901 ccatattttt tagtctcata aacaaccatt tcatccaaca cttcagctaa catcgcctca
     9961 aaagtcgtgg cagtctgacc tgtactgata tactctccct tataagaagt ctgcttcact
    10021 tgatgattgg tataagctac tgtcgaacca ttccattggt caccaacgat aaaaccaagc
    10081 acccatttgg aaacatcttt ccggtagtaa tgactcccca agtcggtatt ccagactttt
    10141 cttcgaccat ggatgacatc aacggcatct tttacatcct ccaatagtcg tcctcgatat
    10201 tggggatggt aggcatcaat agctgtatta tctcgaacat catccactcg aaccccttgt
    10261 aaaagataaa gcggcttatc tgactgacga ttgtgcttat ccaaggcaac ataaaaatca
    10321 acatccataa tcgtttttac acgaatggta ttggccccca tgtctgagat actcttcatc
    10381 catgacaggt aacgtttctc tccaatagca aaatcatttt gatggtagcc agctatgcca
    10441 ctatctattg ttaccccttt gacaataaag ggatgctctc caccccttgt tttccgtacc
    10501 aattcctgat tgcgaacctg gaaagtataa ttaatagtct cttccgagta caccttaggg
    10561 atatacaaac ttccatcaaa ataatacaaa taataaccga ccgtcaatat gcaaaccagt
    10621 atactgacaa ctatcaaata ctttttcata gtccctccta ataatcgact agcgtatttg
    10681 tatttttgga tggagcacaa tattgataca aggtttcaat atgctcatcc aaccatttcc
    10741 cacgattttc aataaaggat ttcacaacat gcacagcttc ttcataactt gcttgattgc
    10801 gttcataggg ctgtagatag ttatgttcat ccattttttg caactgaaag acatagcccc
    10861 atttatcatt atttctttga atggctggac ctaaaaattg aaccgtcttg tcaatatgat
    10921 cgtgaagacg tttggtactg agcagatttt tgcgtagttg atggtactta tgaaccacta
    10981 aatcgataaa ctccttatcc ttgatcatca tgctaaacca cggaacctcc agcatcgaga
    11041 aacctgctcg atcgtattct acatcgctgt ggttatcaaa tgcgttgtta aaatcccata
    11101 cagcaatctt catcttgtct cgcaaatcct tgtagagata ggtggagaat attcctgcat
    11161 ccgtattgcg gaaaaattca ttgataacaa aataagtcgc aaaagcattc ttatctacgt
    11221 agtgcccgta ctgttttaaa tcgtaggagt ataggattct ctcaatctta ctaatatcct
    11281 gctggataaa gtctttttga gcttctgtta tttttcggac atttgggtag cgaatatcta
    11341 gcgatgactg atctgcttga taggtatagc caacatagtt atcgactgga ttttttgcct
    11401 tatgcggtcg gtcccaaaca gcaatatatg atgttttcaa ggagcgtttg tcactttttt
    11461 caacaggaat tctatgtact ccctgctcta tactctcaac aattaaatac aaaccttggt
    11521 actctccgtt aatcatcact tcactataac ggacattggg agcatactcc atcaattcgc
    11581 cagctaggtt ataggatata taatttctca gcagactcct atccagaaat ggaccatgca
    11641 agacccactc ggactccttt ggcattcccg caaccgtgtg ttctacatcc tctccttttt
    11701 tatcgacaaa acgtagttta attgatttct tatcaaaatg ccgagaggaa ttgccacgat
    11761 aagctatttc cgccaacgtt tcaacacgcg ccccatcccc gacacggttt acttcatcta
    11821 atttatcgta cagccgaaca gttcctcgta cagattgttg tcttgttcca ccttcatttt
    11881 ctcctctttc tagaggaatt aacttcccgt ccagagtgtc aatttcgata atcggtaggt
    11941 ggctggccaa gtgttcaacc ggactcactg gttgggcaga tatagaaact ttatgatggt
    12001 aaaatcgttc tttatgctgt tttaggtcaa gcatctgtag actaaaaaca ccaagcagca
    12061 acccgataaa aactaagtaa tacagtattt tttgtttcat agataattat ccattgatat
    12121 catcactttg cgtcacgaca ttaaaatagt ctacctcacc caactgatag acttgttcaa
    12181 ctaagctatt atctgctgaa tagtatttgt cataaacacg ccgattgacc tcaaaaatca
    12241 gctccaacat atctgctttt gtatttttta cacgttgaac aacatgtccg ttaaaatact
    12301 ggaagaagag tccttccaaa ggaacttcta actctcgatt agctcgtaca attaataaca
    12361 tccgattttc atttttaacc cttccccaga tgagaagcag caagaaaatc acactacttc
    12421 caatcattgc cactatataa tctccaacac cacaacagat tccaactaca atcgtccaaa
    12481 aaatataggt tgtatcgcga gaatccttca ctgctgtcct aaaacgaacc accgaaagcg
    12541 caccaaccat acccaaggac agtgccacat tattcccaat aacggtcata acagtcgcag
    12601 tcagtaccgt cagtgtcatg agcgatatgt taaatttttt actataggtc gttccagcat
    12661 gcgtataggc ataagaaacg tagataacac ctcctaaaat agctgccacc acaatatgca
    12721 taatcatatc ttggattgtc aatgttccat gttgttctaa aatatttcgt aataaatctt
    12781 tcatctatct tccctcttaa aatctataat gtttactgat cattcttccc atacaatatt
    12841 tactagcact caattcactg ccatccacct ctgccaacaa atctttgata tgcgacaata
    12901 gaaatccatt gtactttact tctaaaataa ccagatgagg atccaacaaa ctgtattgca
    12961 gcagatggtt attaaagatg tcgtaggatg cttctgtccc gcgtacttga aaatcaaacg
    13021 tgattcgaat atcgttttca ggagaaataa aagctttccg acggtattca ataatcgtct
    13081 taggtttgta acagtactgg ttcatacggc aataaagttc cgtcgccaat ttatctggat
    13141 aggtcaataa cactgaagtg ttcccttcaa ccaatgacat cgcatcactt tttgtcatca
    13201 aaagagaacg tttccgctga ttatctccct gcttctgctt caactctaat ttggcatttt
    13261 gcgaaccatt tccataattc cttaaacgaa tcttccgacg attttcaaga ccatcttctt
    13321 tttcctgcca atcaacatct tctaaagaat caaaatagag ggaacgtaca cagtagccat
    13381 ctgctttacc ataaccatct acttttagta ttttttctaa ctttccgctc aaataataat
    13441 acatttctaa cggaagtaga tacttcttct ccttccgcaa cacttcatta atcaagccat
    13501 gtcactccat tccttttgcc attttctata ataaaaaata caattgtata gttgtcttat
    13561 gattatagta tagttttttg ctaattgctt gacaaccctt ttactcaaaa aaacatataa
    13621 actacagagg tgtatatttt gtctatgtta tgccatctct gcttcaacat ttactcctct
    13681 cctagcactc acttactcaa aaaacaaaaa acccgaccaa agtcgagttt tacagacaag
    13741 ttgtttcaat atagcctatc atcctagatg accatcattt taattatcca caaagccatt
    13801 tgcttcattt tttataattt gaatgtattt ataaatactt acttctgaca ttttgaaagc
    13861 tgtagccacc tgtggaattg catccttgaa atcaaagaaa cctttttgat acaaggagcg
    13921 tacaactgct attttttctg ttcttgatag tttgaatcgc tcaacatctt tcccatgcgt
    13981 ttcttgttca atcgcagcct caatcatact accagcagtt gtatagaaat tttcaacgat
    14041 atttggttct tcatgttcta cttgctcatt agccagttct tcattgacat cttccaaggc
    14101 cgactcgaac aagcgcttca aggttagcat ttttgattta tcagcattga cacaaatcat
    14161 gccaatcaat tcaccagcat catcttttat aaagaaacta gaggaataca attccttccc
    14221 gcccaaagtt tttgtacgat aatttaccag ataatccttt tccttataaa ccttcgactg
    14281 gagtacatcc aacacaaaat ccgttgccgg agcaccaata tcacggccgg ataaattatt
    14341 ttttatataa atcaacgagt gatctagtcc ctgcgaaaag tcttgtagca caacttcggt
    14401 cttcttcccc aaaatttgag ccaaaaaatc aaccaaggga atatagtgat ataattttga
    14461 attcatactc atatccagac tccttataca ttacttgtat cacaccagac tgaaaatcgc
    14521 aaatttttaa cacgaacacg ccaaattata gattgtttcc gaataaatgg ccacaatccg
    14581 cagtaaatct tccacttcca tgtattcatt cgcctgatgc atggtatctt ccctatctgg
    14641 aaatagcgca ccgaatgcga ctccttcttc catcaggcga gcataggtag ctcctccaat
    14701 aaccagcgga gcttcctgtc cacctgtttg gtctcgataa acgttttgca ggcattgaac
    14761 cagctcagat gatggagaaa caaaatgtgg gctcaacttc tcatatccag tcacttggaa
    14821 acattctccc agttttgatg ccaccaaagt ctgaatccta gagaattcaa tcccttttgg
    14881 ataacggcaa tcacacgaaa tcagccctcc agcttctttg gtgtaagata cctgaccaac
    14941 attgactgtc aatttgccca tctctggatc ctgataagca attccgaaac tttctccaaa
    15001 tgaatcttca tggcagtcag ccaataataa tagaaaatct tgttgatttg taggagctcg
    15061 tgagtaagca tccaaaaaac gagccaggtg ggttgccgca ttctccccta aaaatggttt
    15121 gctaccatga gcggattgcc ccaataatgt cagggtaaca ttcttctctc gtctgcatac
    15181 ttcaccagca attccagaat agtcatttat aaaacgataa aatgcttggg atattttttc
    15241 aggttcctct gcttcaagca ctacgaccgc cttgtcagga accatattta cctgcatacc
    15301 ggcacgaaat tctttcagat aaaaatcagg acgattcaca ctaccagtcg tgatttgcaa
    15361 aatactagtc cccttttcac catgtataac agggaaatag gcatcaggaa cccaaccaac
    15421 cttgggaaaa ctacggtatt tttgataagc ctccatacat ttccattcgc tttcttcatc
    15481 acttccaatg ataaaacgaa cggtcttctt tggatttatt cctaaccgtt gcagtatttt
    15541 tattgcaaag atggcacaga ccaacggccc cttgtcgtcc aatactcctc gaccgtacaa
    15601 tcttccttct cgtaaagtcg gtacaaaggg atctgacaac cacccttccc caacagcaac
    15661 aacatcaaca tgccccataa tcccaataac ttcatcagaa ccgccccagt ctgcttgaac
    15721 aaccagatta tcaattatct ctgtgttcag ccctgtctca ttcaataatg tttcgaccgc
    15781 atatagggca catttcggac ctggtccgac cggacactcc tcactcgcta gactatcgtc
    15841 tcgaacagag ttaatactca ccaagtcaca aatatcttgt aacaactcct cttcatactt
    15901 ctttatttca tttaaccagt tcatactaac ctcttatcta aaaataaaag aaccagatgg
    15961 gaaattccct atactggtcc tttatacatt aagcaagtgc ttgttcaaaa tctgccagta
    16021 aatcttcgac atcttcaata ccgcaagata ggcgtagaag actatcacta atcccttgtt
    16081 cagctctttc ttcttcactc agacaagcat gggacatggt tgccggatgc gataaaatgg
    16141 actctacacc acctagacta actgctaaaa tcggtatctt aatcatctta gtaaaggcta
    16201 acatatcctc ttttgagtaa aattcaaagg aaagtaccgc accaccattt gcagcctgtc
    16261 gcatctgtac agaatgattt ggatgattga ccagacctgg ataatgaact ttttttactt
    16321 ttggatgaga aactaaatag tctgcaattg tctgcgcatt gtgtacagac tgcttcatcc
    16381 gaagccccat tgttttcata ccacgcaaaa tcaaccaagc atcctcaaca ccaacaattc
    16441 ctccgaaatt tttttgaaat agtttcagct tatgataata ttcttcgttg ttcgttgcaa
    16501 tcagtccagc aacaacatcg ctatggccat tgataaattt cgttacactt tcaacgacaa
    16561 tgtccacacc tagttccaac ggcctctgat acaaggctgt catgaaggta ttgtcaataa
    16621 cggaaatcaa gccattttct ttagccactt caaccaaggc acgaatatct actaccttta
    16681 ataaaggatt tgaaggagtt tctatataga gcatcttcgt ctggtccgtt atcaccttac
    16741 ggacctgatc caaatcagcc atatctacga aacttgttga aatgccatat tgtggcaaga
    16801 tcttcgtagc aaattgacat gttccaccat acacctcaat aggaaagatg acatggtccc
    16861 cagcttccaa taacatcaaa acatttgata ttgcggccat acccgatgca aatgctatcg
    16921 caaaggtggc ttgttctaag caagctaagc cactttctaa cgcatccgtt gtcgggttcg
    16981 aaaagcgtgt gtataaatac ttttgatggt cgcaatacaa ttccgaatta tgaaaagttg
    17041 aggtttgata gataggaatc gaggccgccc ctgtatattc atctaacact ggataaccat
    17101 gtaacaacct tgtattgtct ttcattccct atacctccgc aattgcttca atctctacaa
    17161 gtgctccaaa aggcaagcgg cctacttcaa aagccgttct agcagggtag tccccatcaa
    17221 agaaagtttg atagacagca ttgaaacttg caaaatcctc tatattgtct aaatagactg
    17281 ttgtcttgat aatatttttc atggaagatc cattatcttc taaaatagct tgcacattcc
    17341 gcaacgactg tgcaacttgc cattcgattg attctggctg atcaattttg cctgtttcaa
    17401 cattaattgg tagttgtcct gatgtaaaaa tcaaatttcc taccttacta gccgcagaat
    17461 aacttcctac cgcagctgga attttttcac ttgaaatacg ttctaccata ttcgattccc
    17521 ctctttgatt ccccttttag ttagtcgctg tagcaacttt tgtttgatta tttttccaaa
    17581 tcatcagcac aatcggcaag ataacatagc cgataaccat agctgtgatt gcaaatacat
    17641 tggctacgac ctcaccattt tccaaggtga tggtaaattg ttgagcccag ctaaatttat
    17701 aaagcaataa taatgtaaag gctagtgcaa gacctggaat gaagacatca acaactggat
    17761 ttttcttaac atcttgcaat gcttctcccc gttctttgcc caaatagaaa atgataactg
    17821 ccaatggtac gatgataaat tgaataaaac gtgaaattga gctaaggaca atgatactgc
    17881 tcatattgaa accgaaggcc atcggtaata aaatagcaat cccaatcgtg ataaggaatg
    17941 aagtcagtgg gaagccattt tcagtacgtt ttgtaaaggc acttggaatt tgtccctgca
    18001 aggccatcgc ttccaaaata cgaggcgtgt ggaaggaagc ggccacattg ataccaaaca
    18061 tagaaactaa agcacctatt acaatcatac tacgaataat attattgtca aatacttctg
    18121 ccaaggctac aacttcagta gtagaaacaa tcgcttctgg gttaatcatc atagcaaccc
    18181 caacaatacc aatataaata gctgccacaa tagcaattgc caatgggata gctcgtggta
    18241 agtttttctc tggcgcttcc atatcctcag aaccactcgc tacactttca aaaccagtaa
    18301 aggcatagaa agctgcaata atcgccatac agtaagcacc catgtctaga ttggaaccca
    18361 aaggttcgcc tgcactgttc ataatggaac taatcgtacc gaattggtta acattgccaa
    18421 ataagacaat agccaagcca acaacgattg tcgtcaccaa agcgccaact tttccgatag
    18481 tagaaaggtt attgatgact tcaaaaattc ttgtaccgaa tatatttaca agtaagagta
    18541 ccgccatcaa acagataaat ccgagagtga tataggtcat atttgtatta tccaacccaa
    18601 atataccaag gacagttttt actaccgcag tccccataac accccaggca atacttgctg
    18661 caatatagcg agtaattccg acataaaaac caacattatc tccgaatgct gccttggcat
    18721 aggcataggc tgcgccacct ttagaaacgt acttagccgc tgctgcaaaa gtaatcgcaa
    18781 gtactgaagc aaataccgct gccagtaaat agaccagcaa ggcttgttgc cccgtagaag
    18841 caactaccgt acctggtgat aggaaaattc ccgtcccgat aacggaatta atagtcagca
    18901 atacgatgga ataaaaacct aatttctttt tcatgacctt ttcctcctac tctcaaacgg
    18961 ccatttcata taaaatcttt tcacttgaca taccttgcgc tgcttcaacc aaggctttaa
    19021 agagacgaca catacccgca tcgcaatggt gtaacatttc aggatgccac tgcacaccaa
    19081 tcataaaagg atagtccgtg ctttcaatcg cttcaatcac accatctctt gctctcgcta
    19141 caactctgaa accatctccc accttacgaa tcacttgatg atggaaagag ttcaccatca
    19201 cttttttctc tcccagcacg tgataaagta cagaatcttc ttcgatctcg atggagtgag
    19261 ttgctaagtc tggatgatgg gcttgccaat gcttgattgt cacaccttcc gcataggata
    19321 aatcttgcca aaggctacca ccgtgtgaca cattgaggat ttgacatcca cgacaaatcc
    19381 ctaagattgg aattcgcttt tctttagctt tttgtaaaag ttgactatcg aaccaatcgc
    19441 gcaatgggaa aatatcccct aatttctgat ctggttcttc atcataattc aaaggattga
    19501 catcgtgccc ccctgaaaga attaatccat caatactacc aatatagcca tcaatgactg
    19561 tctcatcttg actaatcgga ataatgagcg gaatccctcc gctgcgtata acagagttta
    19621 cataatcttc atttacataa gctctatgat aaccaggaaa catccctcct gaatcaacga
    19681 taatactcgc tgaaatccca ataatcggct tagaacactt tgattccata gccatcctcc
    19741 ttgttttata aaatattata tttctttata atcaaattat aatataaaaa gaaaacgatt
    19801 acaatgcttt tttataaaaa agtatatttt tttataaaaa agtatcatat cgcattaaaa
    19861 agatgattaa acaaaaaaac ccgaccagag tcgagttttc caatttacat tattatttta
    19921 cagttgcagt gcttgtgatc acttctacag ctttcttcac agcgatgtca tgtttaagca
    19981 tttctggtga aagcaagcta cgaacttgtg ccacttccat cttgtaagtt gctgccaagt
    20041 cttcgatttc tttgttgatt tcttcttcag ttgcttcgaa accttctgct ttcgctactg
    20101 cttcaacaac taagtttgtc ttcgtacgtt tttcagcatc tgcttcgtat tgtttatgaa
    20161 ggtcttcacg agttgtacca gtgatttgga agtacatatc tggtgagata ccttgttgtt
    20221 gcataccacc caagaattcg ttgattgcac ggtgaacttc ttcgtggatc atttcttctg
    20281 gcaattcaac gatttcagcg ttttctacag ccaattcaag agctgctgat tcaactgcat
    20341 cgtcaaaggc aacttctttt gctgcttcca attctttacg gtacttagct ttcaactcat
    20401 caagtgtttc cacttcttcg tcgatatctt ttgccaactc gtcatccaaa gctggaactt
    20461 cttttgcttt tacttcatgg atttttgtca cgaagagggc tggtttacca gcaaggtcag
    20521 ctgcttgata gtcttctggg aaagtcactt caacgtttac ttcttcacca gctgcgtggc
    20581 ctaccaattg tgcttcgaaa cctgggatga attgacctga accaagtcca agcgagaagt
    20641 tctcaccttt accgccgtca aattcaacgc cgtcgataga acctacaaag tcgataacaa
    20701 ctgtgtcgcc ttcagctgct ggaccttctt tgatgaccaa ttcagccaag ttgttgcgct
    20761 cacgttcgat ttttgcatct acttcttcgt cagatacttc tttagttgct tctactgaaa
    20821 ctgccaagtt tttgtagtca cccaatttta cttcaggttt tgtcacaact tcagcagtga
    20881 ttgtccagtc ttggcctttt tccatagata caacgtcgat ttttggttgt gcaacgactt
    20941 caagaccagc ttcagctaca gctgcttcat aagctgctgg caagagtgca tttactacat
    21001 cttggtaaag tgcttcttca ccgaattttt ggttgaaaac ggcacgtggc aagtgacctt
    21061 tacggaaacc tggaagattg atatctttct taactttgtt gaaaacgcgg tccaattctg
    21121 gtttgattgc atcttgaccg attgtgaaag tcaaaacgcc gcggtttgtt tcttttgctt
    21181 caaatgatac agacattctg tcattctcct taaaatttta ttgcatactc ttcattatac
    21241 cacaaatgac aaggatttca acgattttat aacgtacttt tgggaaatgg cagagctggg
    21301 acttattgtt ctcacttgga atttttcggc gtagactttc tgagtacaaa catggttgtc
    21361 agagcggcag attgattgga caaatcccca tcagtttcca acttatcaat actccgacta
    21421 ttccttggtt ctatcgtcta taaaagtcat catccgctca aatgctttgg cagatacagg
    21481 gtcagttcgt aaattcgcta caaaaccatg tggcttttca agcccttctt ctgccaaagg
    21541 atcgaccaat tcattctcaa ctcccgcttg ctgcaaggct ttattgagcg acaccatatc
    21601 tgttcgatac tcgcttccca gaaggaaact agctgggtag tctttattca catggggaat
    21661 cgggttatag gcattgattt cttcctcact tagataaatg gtttctgaaa cataatttcc
    21721 aaccaaaatc ttcgtactta agctaaattt ggcataatct aaaggagcat catcgatgac
    21781 caaagccttg acatcttctt ttgcaatact tggttcaata ttcaattgct gagcgtaatc
    21841 attgttggct aagagactgc catattgtgc taccatgatg gcacctgctg atgagcccat
    21901 taagacgata ttgtccatgt tcaaatggta ttcttcagcg tgttccttta tgtaggcgat
    21961 agcctgattc atttgaatca ctggcgttgg gaaatggtgg tctggtacaa gagcatagtc
    22021 aacattgaca acgttgtaac cttttgacac gatgtcgtaa atgagatagg tagcttggct
    22081 agcagccaga gggtccacca tatttttact ccctccaaag aatccaccac cgtggaaata
    22141 gaagagggtt ggacggtcag cttcaagatt ttggtctgga taggtaatat ctaaaaaact
    22201 gttgggatat tccttactat aggcaatctc acttttcaaa tactgaccat tttctttcag
    22261 accatcaatg gggtcataaa gaggactgta agagtttggc gaactctcct tgtacataaa
    22321 cgattgaatg acaccgacta ccaactgcgg atgattggta acagacacat aggcaatgag
    22381 accaagacta gctacaatcc caaggatcca taagataatt tttttgaatt ttttcatctt
    22441 gttctcctaa tctaatagtt ctaacccgta actcttaacc tctccgttaa ccgcatcatc
    22501 cagccattct gccacactct tgccttgaga cataggggta aagaatgtcg agaagttaat
    22561 ggtggtgtgc tgagtagcgg tagttttttc atcttgtcca taattccaga caaaaatacc
    22621 cacgccatca atcttagatt gcagttcttg aatcattttt ttaagttctt tttgaaagtg
    22681 ctcactactc tcttctgttg catctgctag tttcccttgg tcaatatagg cctgatattg
    22741 ctgaagaatt ccatctcgat aggaaatgtc aaataaaatc ttaacgctat ctccgcgttt
    22801 ctcatggagg gctactaagc tatctagaac aatattgtct gaatgcagac ggtcactaat
    22861 ggaagtcggt gtcttccaga cattttctgc tatgcttttc caattatcat gtctcaaaaa
    22921 ggcactgtca actgcaaccg tgacattctc tgcggtggga aattgtgaaa tcacttcgtc
    22981 cgcaagcaat gacgttgcaa acccgccagc tgaaaatcca gttaccagaa gcgtatctgg
    23041 attacctatg tgagacttgg cagctgctaa aatgctcatc agattggaat aaccttggtg
    23101 atggactact tgctcttttc cgttatcatc tatataagaa aagttttggg tccctgcatg
    23161 aaaatctcct gtcccatacg gaagcacaat catagtccag tccttaaatg gattgtcttc
    23221 ctgcgaacta ccaattcccc attttgcgac ataatcttga tggccagttg tggtcgcaaa
    23281 ataacgtgtg ccaccactag cagtctcttc attgatactg acaccaccgc cgaagaaata
    23341 gaccattacc ttattcttct ctttaccgat acgaagcagg ccgtgtgcct gatttccctg
    23401 agaatctaca accccttcgg gactgaggcg gtaccattca ttcacttgtg gggtctgagc
    23461 aacaagctca ggagctgacc agccaaatgt ctttttgtag gcaataaaac caagcaaggc
    23521 tagaacaact gtcacagccg ctactatttt ccaaactttt ttcatacttt cttttttccg
    23581 tcctttatgg tatattttta gaaacaagtg tttcgttttt ttatcagtat agcagatgaa
    23641 cagtgggaaa actagtccca gctctgctat ttgcccaaaa ggaaacaaaa gaaaggaagt
    23701 gtttcgcatg gaaaaagtga agcggaaaga gtcgttattt gtggaaagtg tcgtggaggc
    23761 tttgtgggag ttgctggaag acaaatcctt tgaaaagatt agtgtgtcag agttggtgga
    23821 gcgagctggc atcggtcggg tgacctttta ccgaaacttt tccaataagg aagaggtgct
    23881 cgaacggtct ttcaacatgg agttacaagc ctggttgact gagcgaaaga ttgatttgtc
    23941 ggattggtca gatgctcatc tcttactagc tttacggcaa ttttttgact tttggtatga
    24001 gcaacaggat aagattcgct tgttgactgc caaccatttg gactacttgc tcgaggaggt
    24061 cttggatcgc tatttcaaag aaaggctggg ggacatgacc gatgattttc acctgcaatt
    24121 tatcgtaggt ggatttttcc gagtgcttaa aacctgggtt gctagaggct gtaaggaaag
    24181 ccctgatgac atcatgcggt tgatgggtga gcaataggtc aaacttgcca actaccttga
    24241 ccagaccaag caaaaagact tagacaactg tttttcagtc actctaagtc ttttttgtat
    24301 gtggttgtta gtttactctt ttctcacgcc gtactggtaa tcaagaccga ggtggtcacg
    24361 caaggtttcg ccctcatagt ccttatggaa aaggcctcgt tcttggagaa ttggaacaac
    24421 ttcatcaaca aagcgtggta aatcaactcc ataagaatct ggcataaccc agaatccatc
    24481 ccatatagac tagcataata tctattaata acttcaccaa ttattaaacc ttcctctgtt
    24541 gagttgcggc ctgttgaaaa ataatataag ggcacctcta ataaaaccca tcagataaaa
    24601 tctaatgggt ctgaggtata aactgacgtg ctggccacca atcagttatt ttgcatctga
    24661 aagcgatagg gtgatgctga cactatcttg gttaaggagt ttatctagct ctgattggga
    24721 caagtcgata tgccctagct tggtgtagga ccaactattg ctaccaaaaa acagaacgat
    24781 gttattgctg ttatagagca tgatgtcgcc agaagttgcc cgtagttgct ggtcttggct
    24841 tggaagtgta aatccaaggc taccaacttg ttcaaatccg ccgtaagcag aaagattaac
    24901 agtaagcgac tggtcagtga gctttgtttt taaactttga acggcgttat tattctccca
    24961 agttacaggg agtgtttcgt gattgatgct aagtgttagg gtcatctctg tctccttttg
    25021 gtcggtaata gtctcagata tagttgttgc cgtggtggat tgcgaagtag tttcagtagc
    25081 tagttttggc tgtttgccac aagctattaa accaaagagg gtgaggagga gtaaggaaaa
    25141 atagtttatt ttcattgtaa taccttttta ggataatgct tggttaaaga agctgaccaa
    25201 ctgatcaaat gggatttttt ctaccttgtc atagaggtca acatggtctg cattgggaac
    25261 aataaccaat tctgcgatat caccagctgc tttggccaca tcctcagaat aatagcgaga
    25321 gtgggcattt tcccctgcaa tcaacagcat tggccgattc atctcttcga cgttagttac
    25381 caagggaaag ttaaagaatg cttgcggtgt cgtcgctgtc caagctcccg tggaattgac
    25441 agaacgttta tggtaacccc gctcagtctt atagtaatta tgaaaagctg taagaacagg
    25501 attatccttc aaaaaaatat ggaatgatct caggcagacc ttgtgtgacc agaacgtcgc
    25561 cattttcatc aaaggtaatc tcatgaggac ctgtcgcaaa gtttcctgcg tccacatctg
    25621 cctaacgttg agcagctagg tagtcacgga ttttattgcg gtcagccaag ctgtagttgt
    25681 cagcgtagcc tttcgaaata ctgcgagaca tgtcatacat agaggctgtt gctaccgctt
    25741 tgatgcgttt gtcattgata gcagcggtaa tggccatgcc actcaaaccg caaattgcca
    25801 taaccccgat acggttgcga tctacgatat ctagccctcc tagaaaatca acagcagcgc
    25861 taaaatcttc tgtaaaaata tctggtgaag ccacatttct cacttctcca ccgctttcgc
    25921 ctgtgaaggc attgtcaaat gcaagggcca caaagccacg gctagccagt tcattggcgt
    25981 aaaaacctga ggtctgttct ttgacagctc caaaggcacc tgagacaggc agggcagcta
    26041 atttcccaat ggtattttta ggttggtaaa ggtcacccgc cagctcgatg ccgtagcgat
    26101 ttttaaagcg aacgctagtg cgagtcacgt tgtcatgtaa atcaaatgta taggcgtttg
    26161 tcattgaatg ctccatttct tttttgtttt aatagcagta tactacctaa acttaggttt
    26221 aggtcaagca aaaaatacga ttttggagaa aaaaatgtta tgacgacagc ctattacagt
    26281 attggagagg tttctaagcg cctaaatatt cccatttcaa ccattcgtta ttacgataag
    26341 catggtcttt tgccttttgt tcgacgaaca gaatcaggct tgcgctaatt tttagatgtg
    26401 tatattgata tcttgactca tatcaaatgt cactgataaa agccgctgta aaatcaggcc
    26461 gactcagaat tttcttggcc ataagatcca tggtaggaga aacgtgagta tgtcgttttt
    26521 acataaagct ctcctttctc tctacctcaa ctattcgtaa aaaatcggaa aaagaagaaa
    26581 agaccgcatc actaagacac ggtttcttct taaattccaa ccaccactcc tactggccta
    26641 aatagtcttt cagatagcga cttgtggtgc tggttggggt ttggataatg tcggcgatgg
    26701 agccgttgac gactagctgt ccaccatagc gaccaccttg tggccccata tcaatgatat
    26761 tatcagcatt ggcgataaca tctaggtcat gctcgataac aatgacagtg gccccgcttt
    26821 gaatgagctt ttcaaagacg aggacaaggt tgcctacatc tcgagggtgg agaccgatac
    26881 ttggttcgtc aaagatgaaa agatagtgat tctgcttttt ctctagatag gtggccagtt
    26941 tcaggcgctg cgcctcacca ccagataggg caggtgtgct ctcacccaaa tggagatagc
    27001 ctagacctag ctcttccaat acctgcaagg tcacaagaat tgctggctcc tccgcaaaga
    27061 cggtcaaggc ttctgatacg gtcaaatcaa gcaagtccgc aattgaacgg ccctgccatt
    27121 tgacggccag aacctcatcc ttgtaacgac ggccctgaca cttaggacaa gtctccacca
    27181 tatcaggtaa atattggaca tcgagggtca cggtaccagt cccatcacaa tagtcacagg
    27241 caccactttt gttattatag gaaaaatcag tagcagaaaa atcagttgac aaatcatcaa
    27301 agattttacg cagtttgtcc atgattttag aataagtagc cacggtcgaa cggacatttt
    27361 taccgatagg ggtcgagtcg atctctacca cgtgcttaat actttttcca ccagtgatag
    27421 caacgtttga cggcagcttg ctcttagcaa tacgtgcttc aaagccaggc aagaggccgt
    27481 ccaaaatcaa acttgtcttc ccagaaccag aaataccggt caccagatta agaccatttt
    27541 ccacaaagtc tgcggtaact tctttgatat tgtgctgatt ggttactgtc acctggaaat
    27601 gcttgtaaga agcgaggtca tgctcaggtc tcaggcgaat tttagcggtg tgattaagat
    27661 agggtgcaat gaccgactgg ctatcttgtc gaataatctc aggctgacct tgtccaatca
    27721 cctgaccacc ctgctcccca gacaagggac caatttcaat caggtaatct gcggcttcca
    27781 atatggccgt atcgtgatcg acaactagaa cagaatttcc ctgctggatc agttggcgaa
    27841 tgatggcaat cagggcttgg acattttccg cgtgaagacc gacactaggc tcatcaagga
    27901 catagagcat gcctgtcatc tgatttcgga tagttctcgc cagctggatg cgttgcaatt
    27961 caccagtcga taggctgttt ccggcccggt ccaaggtcag ataatccaat cccaaggcaa
    28021 caatcggttc aatcagttcc ttgagctcac tagccaactt gagggtcatt tcctccatct
    28081 ctttgggtac ccaagtcacc aattggtctg cgaaacgagt taattcgaga aggtcatact
    28141 gactgacttc tgcgatattt ttgtctaaaa tgaggctctt gagaaggtca ggattgtaac
    28201 gattgccatg acaggttggg caaggcccca tgtcgtaaaa acgattcagg cgctcgatgg
    28261 ctttttcgtt tttagcggtg gcaaggctat gttcaacagc gacgatggca ttttcatact
    28321 tggcattgag ttcaaaggac ttacccgtct ttgtcggaac cacgatgatt tccttgactt
    28381 ctgggccata gaggataatg tcctgatctt tcttgctcaa ttgttcaaaa ggggtatcca
    28441 ggtccactcc ctgctgctcg gcaaccagtt tcatatgggt ccgccccggc aatttccaag
    28501 aagcgacagc cccttcattg atggtgagac tagggtcagg gatgatttta tccagctgaa
    28561 tctggcgccc ctcaccagta ccctgacagg ttggacaagc cccttccgag ttaaaggcga
    28621 aactttcagc tccgtaaacc ataaactcta cctgacaggt cggacaggtc aagaccccca
    28681 tccgctcatc agagccgata aaatccataa cttccgcaac tctaagcgtt ggctctaagc
    28741 gatgaccgtt gggacagacg tgcgacgcca agcgtgaaaa catgagccgc accacattta
    28801 aagtctcggt cagagtccct acagttgagc ggacattagg cgtttccggg cgttgtctca
    28861 gggcaatggt tgaaggcaaa tattcaacgc tgtccacatc ggagcgccct acctgcttaa
    28921 tccgtcgtcg agtataggtc gaaagggcat tgagatagcg cctagttcct tcagcataaa
    28981 tggtatccat ggccagagac gacttccctg aaccagaaac accggtaata gcaacaaact
    29041 ggtgaagtgg aatgtccagt gatacattct tcaaattatt ggccctagct cctcgcactt
    29101 gaatggcctt gggaatatag ctgtaatcca tgatacacac tccctctgat tctctttcat
    29161 tagtatttaa tgattgccat tctaccacag atgagaaact taagcaagaa ttggaaagct
    29221 actttacaaa gacaggaacc aatctcaata gttacaccgt ttgttacctc ctccaagaca
    29281 aggaaaatca agaactgcga atcagtgaat tggttgagct cctctatctc agtactagtg
    29341 caacctctcg cttggtggtc aagatggaag ctgaaacagg gcttgttgtc cgtgagactt
    29401 gtgagattga caaccgaggt ctctatgtgg tcttgaccca aaaaggacga gattttctaa
    29461 ctgatgcttc tgctgctgtc gaaaagctca tccaaaaagc tctttaaggt atttttttag
    29521 ctatatagtt gcgtgcgcaa gtaattcaca acaaatactc gtcaaatatc gagtatcacc
    29581 atttatttag aggtgccctt atattatttt tcaacaggct gcaactcaac acaagtaagt
    29641 caattacgat tagtttagtt tattcaccac accatgatag actcgttgcc tttagaaata
    29701 tcttcaaggt ctttcagcat cataccatta ttaagattcc ttatcttgac caagatgcag
    29761 actatgtaga tcagtttgga agagaatttt ctggagctga gttagtccat tcgagtattc
    29821 atatcccatt tgcagccagt gattttcagt cttatacctt ggaattatca cgaacgtaat
    29881 caacatctta ttagaccaag gattaggaca ctgtttgggt accagttgtc ctttattatc
    29941 gtgataagtc gttttggaga cttaaagcat cggcatcttg ctggtgcttt tttctgtgca
    30001 tttatagatt ttttcatctc agtcctagaa tagccaatat ggattgaaac aacagttgct
    30061 ttcttatggg ctgaacgcag tcggtttgca acctggtcag ccatttcagt cttgacatta
    30121 tgctaattct attttaaaat agttttatat aaaacaaaaa ggagaccgtc atgccaggaa
    30181 agcaaggagg ttatctgatt ttaaaaattc gcttattaaa tggtaggctc tttaatcaca
    30241 gattgagtaa gcatccagac gcactctaca ctgcggaaca gggtaaaatt ttatccgcac
    30301 tttgggcgaa tgaacctcag tctgccaaag agcttagtaa ggttacagga cttgcaacca
    30361 gtagtctctc ccttatgcta aaacgtttag aagaccaagg gttaattgtt agcaagactt
    30421 cttttgaaga taaacggaga aaagattatt gcgttactcc tcagggtgct cagcaacaag
    30481 ctgttggaga tgctgtcagc agagaggtta gctctgtctt ttaccaaggc tttagcaaac
    30541 aagaaattag ggagtttgaa ggctatctag agcgaatttt gcagaattta gaaagggaat
    30601 taggggatga caagagggag aagccataag gggcaaagtc tcatagcgag gctggcggac
    30661 tatacggtgg ttgatattga gacgacggga atggcaggaa atagggctaa gctcattgag
    30721 gtttctgcca ttcgagtacg acttcataaa cctgtggcac acttttcacg gctaatcaat
    30781 ccccaccaaa ggcttagtcc ttttataaaa aatctgacag ggattacaga tcagatgcta
    30841 agtcaggctg aggagctggt acctgtcttg cgtgattttg ttgattttct gggtaatgat
    30901 gtcatcgtgg ggcacaatgt ccactttgat gtgaattttt tgtacgataa ccttgagcag
    30961 cattgtggtc ttactttgac taatgacatg gtagacacct tgcggctttc taggcgctgg
    31021 ctggatttgc cccgtcatcg cttagatgat ttagtggctt attacggatt tgatatccgc
    31081 acgcagcacc gcgcccttaa tgactgtttg ctgacacacc aagtttacca agccttgata
    31141 gctaaaggag aaatacatga caacttataa agatttgctg attgacgacc tgaaccgtgc
    31201 ctacgagcgc tttgagcgag cctttgaggg tgtgacggtg gtgcaggcaa atgcctttcc
    31261 agtcgctgaa ttcgccccgc aggtcaaatc tatgacctgg ctactctggc atacggctat
    31321 ggttttagat atccaaattg cagagctggc tggcacagac tggctttaca agcaaggctg
    31381 gcaggacaaa ttgccaaaag atgacacgac aaacccaagc tggctccata cgcttgagga
    31441 agcccagacc atcacagttg acagctttga cgacctcttt ggctactttg ccgcagcgcg
    31501 tgaccaagcc gtcgcctaca ttgctagctt gactgaagaa agtctcgagg acatcgtgga
    31561 cgagtcttgg ataccggctg tgacccgtgg tgtgcgcttg gtgtcaacaa ttgatgatgt
    31621 ggctatgcat tcaggtcagt ttttttacgc acggcgtttg ctaggcttga cggattagga
    31681 gaaaaacatg gcacaaacct ctctttttga cgataatagc agagcttcta tgccactggc
    31741 tagtcgggta cggccgcagg atttggccca ttttattggg cagaaacacc tagttggtaa
    31801 ggggaaattt ttacgggaaa tgattgacaa ggatcaggtg tcttccatga ttttctgggg
    31861 gccacctggt gtgggcaaga ctacactagc tgaaatcatt gccaaaacca cccaatctca
    31921 cttcattacc tttagtgccg tcatgaatgg cattaaggaa attcgcaaga ttatgaatga
    31981 ggctgaagaa aaccgcctcc taggtcagcg gaccattgtc tttattgatg aaatccatcg
    32041 tttcaacaag gctcagcagg acgctttttt gccctatgtg gaaaagggca gcattattct
    32101 cattggggcg acgacggaaa atccctcgtt tgaggtcaat tcagccctgc tctcccgcac
    32161 caaggtattt gtccttaagc aactgacaga aagtgatatt gcagaactcc tacgtcaggt
    32221 cttatctgat gaacaggcct ttcctgagac gacggtgcat atcactgatg atgtcatcaa
    32281 gcaaatcgcc attttctcca atggggatgc tagaagtgcc cttaatacgc tggaaatgct
    32341 agtcattaac agcgaagtgg tcaatcagca ggtcactatt tcggaagatt tggtggcgac
    32401 gcttctggac aagaagacca gctactacga caaggatggt gaggagcact acaacatcat
    32461 cagtgccctt cacaaatcca tgcgcaatag cgatgtggat tcggctattt attggctggg
    32521 gaggatgatt gatggtggag aagatcctgt ctatattgct cgcagactga ttcgctttgc
    32581 cagcgaggac attggcttgg cggataataa tgccctgaat ttggctatca atgtcatgca
    32641 ggcctgccgc tatattggcc taccagagtg tgatgtccac ctgactcagt gtgtgattta
    32701 tttgagcttg gcgcctaagt ctaatgccag ctacaaggca cgtgtagcgg tgcaaaagga
    32761 catcaaacag accataaatg agcctgttcc cttgcagcta cgcaatgcca cgaccaagct
    32821 catgaaagag atcggctatg gtaaaaacta ccaactagcg catttctacg aggataagct
    32881 gaccaccatg aagactcgcc ctgacagtat cgcagaccat gtctactatc aacccacaac
    32941 agagggcaat gaagcccgta tcaaacaacg tttggaatat attaaggaat ggaaagctac
    33001 tcacgacaca ggatttgtcg actaagggag atgtctgatt tacattttag ttatctccgg
    33061 tcgcctcatt tgagatatct ataagaaaat cagcaagtac aaaattgata cttgctgatt
    33121 tttataccaa agatatttta tttgtgaaag gcatcgttcc ctttttgatg aatcaatgaa
    33181 aatgaaaaga aaaccaaaag ctttttgaac ttttggtttt gaattgagtt acaaaatagt
    33241 ctgggcgaag atgcgacctg gattgatggc ggatttctca atccatcgaa aaaagttctg
    33301 agatggactc tcaaatcttt tctagattat tctatttcct cctcggtttc aaggctgaca
    33361 gaccgtgtgc taatcagtta aattcatcca agaagaggtt agggatttgg agaaacttgt
    33421 catttgtatc aattgtcata aatgaaacga agtagtaaaa gcgacttgtt tcaaacagga
    33481 caatggggta aactagtaag taatgaatct cagggagcgg acactatgac tgaatcagcc
    33541 aaaacaaaac tacaacaagc attgattctt ctcttagata aggaagaatt tggacgtatt
    33601 tccgtcagca aaatttgcaa ggaggctggg gtacatcgct ctacttttta ccattattat
    33661 gacaatcaat ttgacttatt agaggatgct tatcaatacc ttacccaact tttcttagct
    33721 gaattccaat cttatcccgc taacagtcta ccaattgaaa ccgatctaac aggcgatgcc
    33781 tacctcattt cctacctaca atttgtaaaa gaccaccaga aaatctatca gatttatctc
    33841 cgtcacgaat tagattttca ccacaaagaa cgctttgaac acttggtaga attgattttt
    33901 actcctcgct tccatgctca agggatccaa aatccagtac aaattgccta tgtatctagc
    33961 ttctttctgg caggcataac acaagtcgta tccaagtggg tgagaaatgg ctgtgctgaa
    34021 tcgattgaag agatggctga cattatccaa atctgtatct ctagaaagca a
//
LOCUS       DBNFCX010000014        33671 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.014, whole genome shotgun sequence.
ACCESSION   DBNFCX010000014 DBNFCX010000000
VERSION     DBNFCX010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 33671)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33671)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33671
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.014"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(195..2696)
                     /gene="leuS"
                     /locus_tag="AC1PJC_000550"
     CDS             complement(195..2696)
                     /gene="leuS"
                     /locus_tag="AC1PJC_000550"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014639013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HIP6619575.1"
                     /translation="MSFYNHKEIEPKWQEFWAKNHTFKTGTDADKPNFYALDMFPYPS
                     GAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYAMDTGNDPADFTA
                     ENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAYEAEVPVNWVE
                     ELGTAIANEEVLPDGTSERGGYPVVRKPMRQWMLKITAYAERLLNDLEEVDWPESIKD
                     MQRNWIGKSTGANVTFKIKDTDKDFTVFTTRPDTLFGATYAVLAPEHDLVDSITSAEQ
                     AEAVAEYKRQASLKSDLARTDLAKDKTGVWTGAYAINPVNNKEIPIWIADYVLASYGT
                     GAIMAVPAHDERDWEFAKQFNLDIIPVLEGGNVEEAPYTEDGAHINSDFLDGLNKEEA
                     IAKMVAWLEENGVGQEKISYRLRDWLFSRQRYWGEPIPIIHWEDGTSTAVPENELPLV
                     LPKTSDIKPSGTGESPLANLTDWLEVTREDGVKGRRETNTMPQWAGSSWYYLRYIDPH
                     NDEKLADEDLLKAWLPVDIYIGGAEHAVLHLLYARFWHKFLYDLRVVPTKEPFQKLFN
                     QGMILGTSYRDSRGALVATDKVEKRDGSFFNIETGEELEQAPAKMSKSLKNVVNPDDV
                     VEQFGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFLDRVYRLLTTKELVAENSGALD
                     KVYNETVKTVTEHIEDLKFNTAIAQLMIFVNAANKEDKLYVEYAKGFVQLIAPFVPHL
                     AEELWQGLANTGQSISYVAWPTYDESKLVESEVEIVVQIKGKVKARLTVAKDLSPAEL
                     EKVALADEKVQAEIAGQTVVKVISVPNKLVNIVIK"
     gene            complement(2835..3677)
                     /locus_tag="AC1PJC_000551"
     CDS             complement(2835..3677)
                     /locus_tag="AC1PJC_000551"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HIP6619576.1"
                     /translation="MKVGLVLEGGGMRGLYTAGVLDAFLDADIHVDGVVSVSAGALFG
                     VNFLSKQRGRAIRYNKRFIKDKHYMGLRSWLTTGNMVNKDFTYYKVPMELDRFDQDAF
                     AQSGIPFYVTVTNIETGQPEYYKIDHVFEQMELLRASSALPLVSKIVEVDGKKYLDGG
                     LSDSIPVEFAKSLGFDKLIVILTQPITYRKKASSGRIYRMFYRKYPKFVSVASKRYQH
                     YNQTVEKIIQLENEGQIYVIRPHQALQIGRLEKNPEKFEEIYQAGLQDGMGAIEDLKG
                     YLEK"
     gene            complement(3901..5793)
                     /locus_tag="AC1PJC_000552"
     CDS             complement(3901..5793)
                     /locus_tag="AC1PJC_000552"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002929032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase"
                     /protein_id="HIP6619577.1"
                     /translation="MTRLQDDFYEYVNGEWAKTAVIPDDKPRTGGFTDLADEIEKLMI
                     DTTNAWLAGEDVPEDSVLQNFVAFHKQVADYETRDRLGAEPAQALIAEYKALNSFEEF
                     TSKLAEYELAGKPNLMPFGVAPDFMDATTNVLWADSLGIILPDTTYYEEGHEKGAELL
                     KTWRESQEALLPKFGFSDEEIKDLLDKRLELDAMIAKYVLSNEEGSEYAKLYHPYEWA
                     DFTALAPELPLDDFFTAILGQTPDKIIVPEERFWQAAKDIYSADNWELLKATLILKAA
                     GTYTAFLSDEIRILAGAYSRALSGTPQAQNQEKAAYNLAQGYFNQALGLWYAGEKFSP
                     EAKADVEAKVAKMIEVYKSRLETADWLAQETRDKAIVKLNVIKPYIGYPEALPERYYK
                     KIVDPSKSLVENAIELNKIDIAHGWSKWNKPVDIKEWGMPAHMVNAYYNPQKNLIVFP
                     AAILQAPFYSLEQSSSANYGGIGAVIAHEISHAFDSNGASFDEHGSLNNWWTEEDYAA
                     FESRTQQVIDQFEGQDSYGAKINGKLTVSENIADLGGIAAALEAAKSEDAFFAEEFFT
                     NFARIWRMKARPEFMQMLASVDVHAPGHLRTNIQLPNFDEFHETFGVQEGDGMWRAKE
                     DRVIIW"
     gene            complement(5849..6688)
                     /locus_tag="AC1PJC_000553"
     CDS             complement(5849..6688)
                     /locus_tag="AC1PJC_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HIP6619578.1"
                     /translation="MFEVLLILMVIASSCGLLGSILVVKNQSMLADALSHSVLLGIVL
                     GFFISHSLDSPLLIVGASLFGLLSVLAIDRLHSRKIAHDAATGLVFSCFFAVAVLLIS
                     LFARNVHLDVDLVLQGEVLFAPLHRMDVLAWSLPVSLVKSSLAWLVIVLFFVWAYHRL
                     QVYLFDSNHARLSGLRTRILEMVILILVSLTTVLAFEAIGSMTVIVFLVAPSMAALRW
                     VKSFWQLLLLGQGIAILTVVLGFLVANQLDLTMSGTCAVVSLLVVCSSIILKNTWSRS
                     SDK"
     gene            complement(6681..7541)
                     /locus_tag="AC1PJC_000554"
     CDS             complement(6681..7541)
                     /locus_tag="AC1PJC_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HIP6619579.1"
                     /translation="MFEVFKEYSFWTVALGTVSLAVAASTIGSISVLTKQSLLGDALG
                     HASYPGVIVSFMIFQSRHPLYLLLGAVLSGYLSYALVHWLRRKGGHSLVNALSLVSAS
                     FFGLGMVLKNAIQGNEAFAGASQAGLQTYLFGQAAFIQLDDVILIGIISLLALVLFAF
                     FYQDYKLYLFDQTFARVIGVRVRYLQQLTMFLMICLIAVGLKLVGAILMSSFLIAPAV
                     FGLMLGKSYHKSLLLAGIVAIGSAFVGTWISSSVSGLSTGPTIIVCLTGLTLSAFVYV
                     TYVRKENGRV"
     gene            complement(7534..8304)
                     /locus_tag="AC1PJC_000555"
     CDS             complement(7534..8304)
                     /locus_tag="AC1PJC_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HIP6619580.1"
                     /translation="MSAIIELKDVNLAYTASQTMALEDVNLVIPRGSRTAIVGPNGAG
                     KSSLFKVILGLEKPDTGQVRLLGQEAGLERLIAQKVAYIPQSSQVNWQFPATVFEIVL
                     MGRFAHSKGMFRRPTKADRQIVEQALERLKIADLRHRQIDQLSGGQRQRVFLARALAQ
                     EAELYLMDEPLAGIDQATEIMIMDMLKEFQGEGKTSIVIHHDLTTLDAYFDHLVWLHK
                     HVIDSGPMDETLTSENYQATYGIGNGLFLGNAKGGSHV"
     gene            8348..8617
                     /locus_tag="AC1PJC_000556"
     CDS             8348..8617
                     /locus_tag="AC1PJC_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619581.1"
                     /translation="MKIKIRPTYQAEKVDKIKIPYQQIAGKPYTSLISTHQYMNLIFA
                     EHQCFFQLYVYNSVKNGPKTERTRPRPSPFYYSFEIPIHAQTTDI"
     gene            complement(8858..9781)
                     /locus_tag="AC1PJC_000557"
     CDS             complement(8858..9781)
                     /locus_tag="AC1PJC_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter solute-binding protein,
                     Zn/Mn family"
                     /protein_id="HIP6619582.1"
                     /translation="MKKILFSFALLLSLIGLGACRPSQTTEGSSKPRVAVTTSFLNDM
                     VYQLAGDEVERDLLIPAGEDPHLYVAKSSDLSKLQKADLVLYHGLHFEGKMVEALEKT
                     GVAVSKNFNAKDLNTMDEDGEEIVDPHFWFSIPLYKSAVAVASEELQKLLPAKAEMIQ
                     KNAEKYQAQLDDLHAWVEKELSVIPKESRYLVTPHDAFNYFAASYDFTLYAPQGVSTD
                     SEVANSDMIETVNLIIGHNIKAIFTESTTNPERMEKLQEAVKAKGGQVEVVTGEGKEL
                     FSDSLAPEGEEGDTFIDMYKHNVKLMVKYLK"
     gene            9907..10566
                     /locus_tag="AC1PJC_000558"
     CDS             9907..10566
                     /locus_tag="AC1PJC_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent transcriptional regulator"
                     /protein_id="HIP6619583.1"
                     /translation="MTPNKEDYLKCIYELGQLDQKITNKLIAEKMAFSAPAVSEMLKK
                     MVAEELISKDAKAGYLLSQTALEMVANLYRKHRLIEVFLVEQLGYSPEEVHEEAEILE
                     HTVSDHFINRLDLLLEQPQTCPHGGSIPQAGQPLIERYQTRLSQLTETGNYQLVRIHD
                     FYQLLQYLEQHELAVGDLLTVTDFDHFAQTITIQYKDKELAVPTAIAQQLFIEKSNRP
                     A"
     gene            complement(10961..11146)
                     /locus_tag="AC1PJC_000559"
     CDS             complement(10961..11146)
                     /locus_tag="AC1PJC_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619584.1"
                     /translation="MKKLLTNHFFYLTIAFLLILVIYFSGIDKRWIILASFLYFIPSQ
                     ILYRRRLRERLQENQPE"
     gene            complement(11222..11665)
                     /gene="dtd"
                     /locus_tag="AC1PJC_000560"
     CDS             complement(11222..11665)
                     /gene="dtd"
                     /locus_tag="AC1PJC_000560"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000691442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - peptidyl-tRNA hydrolase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HIP6619585.1"
                     /translation="MKIVLQRVSQASVTIEGSIHGQIEQGLLLLVGVGPDDSQEDLDY
                     AVRKIVNMRIFSDEAGKMNKSVQDVAGKILSISQFTLFADTKKGNRPAFTGAAAPALA
                     SRLYDAFNQALSAFVPVEVGVFGADMAVSLVNDGPVTIVLDTKNK"
     gene            complement(11667..13868)
                     /locus_tag="AC1PJC_000561"
     CDS             complement(11667..13868)
                     /locus_tag="AC1PJC_000561"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008728 - GTP diphosphokinase activity
                     [Evidence IEA];
                     GO_function: GO:0008893 - guanosine-3',5'-bis(diphosphate)
                     3'-diphosphatase activity [Evidence IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RelA/SpoT family protein"
                     /protein_id="HIP6619586.1"
                     /translation="MKEINYTGEEVVALTATYLPEEDVIFVKKALDFATEAHKSQFRK
                     SGEPYIVHPIQVAGILAGLKLDAVTVACGFLHDVVEDTDVTLDDMEAEFGPEVRHIVG
                     GVTKLGKVEYKSHEEQLAENHRNMLIAMSQDMRVILVKLADRLHNMRTLKHLRKDKQE
                     RISRETMEIYAPLAHRLGISSIKWELEDMSFRYLNEIEFYKITRMMSEKRREREELVN
                     EVVDKLRDYTEERHLHGQIYGRPKHIYSIYRKMHDKKKRFDQLYDLIAIRCIMDTPSD
                     VYAMLGYIHELWKPMPGRFKDYIANQKANGYQSIHTTVYGPRGPIEFQIRTMEMHQVA
                     EYGVAAHWAYKRGGKATASEKELRWINNLIELQEGAGDAQTFVNSVKDDIFTERIYVF
                     TPDGAVRELPKDSVPIDFAYEIHTKVGERATGAKVNGRMVPLTTKLKTGDQVEIITSA
                     NSFGPSRDWVNLVKTHKARNKIKQFFKNQDKELSVSKGREMLQNLLQENGYVPNQYLD
                     RRHMDEVLQKTSYKTDESLFAAVGFGEVSAISIFNRLTEKERREAERAKAKAVADELV
                     NGGEVKHDNKDSLKIRHEGGVVIEGASGLLIRIAKCCNPVPGDEIVGYITKGRGVAVH
                     RVDCMNLKSQENYDVRLIDVDWEDENSTKEYMANIDIYGLNRSGLLNDVLKVLTNASK
                     NISSVNAQPTKDMKFATIHVSFGISNLATLTSLVDKIKSVPEVYSVKRTNG"
     gene            14124..16565
                     /gene="sntA"
                     /locus_tag="AC1PJC_000562"
     CDS             14124..16565
                     /gene="sntA"
                     /locus_tag="AC1PJC_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein SntA"
                     /protein_id="HIP6619587.1"
                     /translation="MNFRFSKCAVALTLALLAASNPKLAQAEEILNTTPASSTEASQA
                     VPVESDTTEEADNTESPVPATTEAENPSSSETAETSDPTSETTDSTASEARTVTPAAT
                     ETSQPIEGQTVDVRILATTDLHTNLVNYDYYQDKPVETLGLAKTAVLIEEAKKENPNV
                     VLVDNGDTIQGTPLGNYKSIVDPIEEGEQHPMYAALETLGFDVGTLGNHEFNYGLAYL
                     EKVIRTANMPLVNANVLDPTTKDFLYTPYTIVKKTFTDTDGKKVTLNVGVTGIVPPQI
                     LNWDKAYLEGKVIVRDAVEAVRDIIPTMRENGADIVLVLSHSGIGDDQYEVGEENVGY
                     QIASLSGVDAVITGHSHAEFPGTAEKPSFYAKYSGVDDTNGKINGTPVTMAGKYGDHL
                     GVIDLNLVFKDGKWTTTSSKAAIRKIDTKSSVADGRIIDLAKEAHNETINYVRQQVGE
                     TTAPINSFFALVQDDPSVQIVNNAQIWYAKQQLAGTSEANLPILSAAAPFKAGTRGDA
                     SAYTDIPAGPIAIKNVADLYLYDNVVAILKVNGAQLKEWLEMSAGQFNQVDPSSTEPQ
                     NLVNTDFRTYNFDIIDGVTYQYDITQPNKYDRNGKVVNETASRVRNLQYNGQDVTADQ
                     EFIVVTNNYRANGTFPGVREASVNYLLNLENRQAIINYIIAEKVINPTADNNWTFTDS
                     IKGLDLRFLTADRAKTLVADQEGIVYLQASTASEGFGEFKFVYTEPKVATPDEQQSDQ
                     GNTGQDIVLESGQRITLPAVNPPAPAPQHKLASPHSQASTKTLPATGEATSMLSLLGL
                     TLIGFVGAWTKKKEH"
     gene            complement(17069..17626)
                     /locus_tag="AC1PJC_000563"
     CDS             complement(17069..17626)
                     /locus_tag="AC1PJC_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619588.1"
                     /translation="MKRLSTPIFTALGFFLIVFVALNQFGRVPGTSYQIISELILYNQ
                     ATEQTYEFENYEVRKAFIRQLSSTSSRGFQASDSRTSLETTYHETIMSENLISSIYGG
                     EEGRIMEFRRPRKSALGNLVFASESVSYPVFARKYGNIRLETTILCQEFRVEQRLANQ
                     SNWVDLGTYTVKSPKETRYVPIYWE"
     gene            complement(17867..18583)
                     /locus_tag="AC1PJC_000564"
     CDS             complement(17867..18583)
                     /locus_tag="AC1PJC_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF554 domain-containing protein"
                     /protein_id="HIP6619589.1"
                     /translation="MFALGTIINTVAIALAGLLGSWFGHLLKERHQSGLTVASGLAVL
                     FLGISGSLEGLLTVVDGQLKSQNSMLLVLSLALGTLIGEVLHIEGWFERLGVWLREKS
                     GNSQDGQFLDAFLTASLTVCIGAMAILGAIQDGLTGDYRLLAVKSILDFIIILIMTSS
                     LGKGAGFSAVPVFFFQGSVTLLARLIEPLMTNQALANLSFIGSALIFCVGVNIIWDKK
                     IRVANMLPAIVIAVIWSYFT"
     gene            complement(18593..19855)
                     /locus_tag="AC1PJC_000565"
     CDS             complement(18593..19855)
                     /locus_tag="AC1PJC_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619590.1"
                     /translation="MSELEQKEHRELIVSDDCFALIQKMSELDSSAYQRYEITNPNIL
                     AHVEKIVQPALKHHLKKAGQPNIPKGLFKVDLPIGDLHKIKGETDKYRAFVKGAEGKF
                     KAHAILTPAQVEIAKGAKAAAAVSGAMQVAAMVVGQYYMAEINGQLDSMKETLNDVKD
                     FQVREFKGTVRALIVNISQLSKFSADYVENAELARLKLMECANFRAEVTKLLEQVNLA
                     IEESITKGKGLSFEKYEQLIEKLSTNLFYQQTLLRLLAELSKLDLVFSQGVASEDSSY
                     YVYEYYLNNCNSLGEKIANWHKDKIKFFQIDTKRNRRTQEGPMKVVADIAKELDKNAH
                     VAAGVGFLGGLVGAAAGFGIGKAAGELNKAIRYIDVRKRTVKLISEQETVSYQSSKRL
                     SVNNYGENVKLLVEDGKVYYLLPDDSES"
     gene            complement(19869..20615)
                     /locus_tag="AC1PJC_000566"
     CDS             complement(19869..20615)
                     /locus_tag="AC1PJC_000566"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HIP6619591.1"
                     /translation="MQQYFVNGRAPQGVFQISDKDTAKHMFSVMRLQADEQIVLVFDD
                     GIKRLARVVDSQNQSVEVIEELADNVELPVSVTVAMGFPKGDKLEFVAQKATELGMSA
                     LWAFPADWSVVKWDGKKLAKKAEKLEKIAQGAAEQSKRNRIPAVRLFEKKVDFLAQLA
                     GFDQIILAYEESAKEGEQANLVKILSGLEIGQSVLVIVGPEGGVSPEEVAAFEGAGAV
                     KTGLGPRILRAETAPLYALSAISYATELLR"
     gene            complement(20617..21570)
                     /gene="prmA"
                     /locus_tag="AC1PJC_000567"
     CDS             complement(20617..21570)
                     /gene="prmA"
                     /locus_tag="AC1PJC_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001099287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HIP6619592.1"
                     /translation="MNSWQELTIHVHRDAEETVSNLMIETGSQGVAISDSADYVGQED
                     RFGELYPEVEQSDMIAITAYYPDTVDIEEVKADLAARLADLTGFGLETGQVSLESQEL
                     AEEDWADNWKKYYEPARITHDLTIVPSWTDYEATAGEKIIRLDPGMAFGTGTHPTTKM
                     SLFALSQALRGGETVIDVGTGSGVLSIASSLLGAKEIYAYDLDEVAVRVAQENIDLNA
                     NTSNIHVAAGDLLRGIDIEAEVIVANILADILIHLTEDAYRLVKDEGYLIMSGIIADK
                     WDMVRASAEAAGFFLETHMIQGEWNCCVFKKTTDRSGVIGG"
     gene            complement(21738..22472)
                     /locus_tag="AC1PJC_000568"
     CDS             complement(21738..22472)
                     /locus_tag="AC1PJC_000568"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619593.1"
                     /translation="MKKAEQIWWKGNFTHIRGIEMSQDRKRIPKFPARTSAFPQELYF
                     MMVRTILASIDESNEGEGINFYNSSLFYIPVIAINLWEYLLNSAFQNDFVRSVTIFGE
                     AQEALDKWDIKTKTLVYPKLLLGEGILSKDESLWQDFQLVLKIRNEIIHYKNSFYEGP
                     AKEVAELRRRQLTVRKQGFFIMDWPMEIATTEFARLCVNTVVKLWERLHKLTEDSPFD
                     TFYKPDVELILTEEWVKNEMRKKASL"
     gene            complement(22414..22884)
                     /locus_tag="AC1PJC_000569"
     CDS             complement(22414..22884)
                     /locus_tag="AC1PJC_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005591596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3013 family protein"
                     /protein_id="HIP6619594.1"
                     /translation="MAKHGFLDVLEVALDKHFTYDYELNWDKKNHAVELAFILEAQNA
                     SGIETVDDEGNASAEDIFLEEYVLFYNQDKSRFDAEDYLVALPFDAKKGFSAEFLTYF
                     AGFLKDTADQGLDDLMDFLADPEAQEFAIAWDSEAFEKGRADLVEGEFYPYPRY"
     gene            complement(22886..23221)
                     /locus_tag="AC1PJC_000570"
     CDS             complement(22886..23221)
                     /locus_tag="AC1PJC_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MazG nucleotide pyrophosphohydrolase
                     domain-containing protein"
                     /protein_id="HIP6619595.1"
                     /translation="MAELTVSVLEEYLRDHYGTTVPEQSLFMKLVEEISEVAELLNKR
                     AGRKMMDGEEDSFARLAEELADVIHYAVVLAAVNRLDLTKSILEKDKRASVKYGREIN
                     LLEFIEKRK"
     gene            23291..24574
                     /locus_tag="AC1PJC_000571"
     CDS             23291..24574
                     /locus_tag="AC1PJC_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HIP6619596.1"
                     /translation="MPANLALRMRPKSIDEVIGQEHLVGPGKIIRRMIDANMLSSMIL
                     YGPPGIGKTSIASAIAGTTKYAFRTFNATTDNQKRLQEIAEEAKFSGGLVLLLDEIHR
                     LNKTKQDFLLPLLENGNIIMIGATTENPFFSILPAIRSRVQIFELQPLKTTHIRQALE
                     LALTDSERGFDFPITIEPEALDFLSNATNGDLRAAYNSLELAVLSTKESEGGRHIDLD
                     AVENSLQKSYISMDKNGDAHYDILSALQKSIRGSDVNASLHYAARLIEAEDLPSLARR
                     LTVIAYEDIGLANPEAQIHTVTALEAAQKIGFPEARILIANVVIDLALSPKSNSAYLA
                     MDAALADLRKNGHLPIPNHLRDGHYTGSKELGNAIGYQYPHAYPEKWVDQQYLPDKLL
                     QADYFTANDTGKYERALGMTQEKIKNLKKNRRQNP"
     gene            24676..24869
                     /gene="ssrS"
                     /locus_tag="AC1PJC_000572"
     ncRNA           24676..24869
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="AC1PJC_000572"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:15.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            24878..24950
                     /locus_tag="AC1PJC_000573"
     tRNA            24878..24950
                     /locus_tag="AC1PJC_000573"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:24911..24913,aa:Lys,seq:ctt)
     gene            complement(25055..25612)
                     /gene="nrdG"
                     /locus_tag="AC1PJC_000574"
     CDS             complement(25055..25612)
                     /gene="nrdG"
                     /locus_tag="AC1PJC_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014639014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043365 -
                     [formate-C-acetyltransferase]-activating enzyme activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase
                     activating protein"
                     /protein_id="HIP6619597.1"
                     /translation="MNNPKPQEWKSEELSQGRIMDYKAFNFVDGEGVRCSLYVSGCLF
                     HCEGCYNVATWSFKAGIPYTKELEDRILADLAQPYVQGLTLLGGEPFLNTGTVLPLVK
                     RIRKELPEKDIWSWTGYTWEEMMLETPDKLELLSYLDILVDGRYDRTKRNLMLQFRGS
                     SNQRIIDVQKSLQEKRVVLWDKLKK"
     gene            complement(25799..26293)
                     /locus_tag="AC1PJC_000575"
     CDS             complement(25799..26293)
                     /locus_tag="AC1PJC_000575"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIP6619598.1"
                     /translation="MELRRPTIADKETILEMLAEFEKAGSAMDGGFISKDVDFEEWIL
                     RNKDYEVGLNLPDGFVPSIQYVSFDQTGRALGFLSLRLRLNDFLLNKGGHIGYSIRPT
                     ERGKGYAKDQLRLGLQEAATKNISKVLVTCLTDNQASRRTIVACGGVLEDVRDGVERY
                     WIED"
     gene            complement(26295..27641)
                     /locus_tag="AC1PJC_000576"
     CDS             complement(26295..27641)
                     /locus_tag="AC1PJC_000576"
                     /EC_number="3.1.-.-"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA];
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009166 - nucleotide catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional metallophosphatase/5'-nucleotidase"
                     /protein_id="HIP6619599.1"
                     /translation="MDYTDISILHTNDMHSYMENFPKKAQLIANIRDGNEKKGIPTFV
                     FDSGDLFSGNIFFNMYRGVKEIELMNQIGCQAMTLGNHEFDHGDELLSRLDDYAQFPI
                     VSSNLSYQDVEAADELVPLEDVLEFDMNGKSLYVLGLTTLETQEVASPSENVIFEDHR
                     QALRRVVDQIVSQNPSAHLVLLSHLGYDEDVHLAKDFPELNVILGGHTHTILKQPSQI
                     GGVSICQAGQYGRFVGHLSLRCFADGRHEVLAYDLIEVEKLTQEDRAVKAIIDQMKSE
                     RDAAFSKPIAILPQALDGERDSIRQRLSTLAPVICQALFEQASQLGLQADGAVINGFG
                     IRASLLAGPIFYSDLVKVLPFSKRVLLVRIKGRDLLSSLQTGLHPQMWGIVQSGEGFV
                     VNGRAVESDKDYQIVTNSFVWSGKDNYDDFHKAEIVQDLGLDIDIISEFFKRQYGD"
     gene            complement(27643..27777)
                     /locus_tag="AC1PJC_000577"
     CDS             complement(27643..27777)
                     /locus_tag="AC1PJC_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619600.1"
                     /translation="MGKYQLDDKGKALVTRYHEKNSNVKQDKKARVQELLKQAKNKKK
                     "
     gene            complement(27871..30042)
                     /gene="nrdD"
                     /locus_tag="AC1PJC_000578"
     CDS             complement(27871..30042)
                     /gene="nrdD"
                     /locus_tag="AC1PJC_000578"
                     /EC_number="1.17.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008998 - ribonucleoside-triphosphate
                     reductase (thioredoxin) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /protein_id="HIP6619601.1"
                     /translation="MNVQENVLPSIELLVLKRDGRTVSFDQDKIFSALRRANQELEHP
                     VSEAGLKIVLEAVLAEIGRRFEKDVQIYEIQTVVEQELLKAHLYDLAELYIQYRTRRD
                     FRRHQATDINFEIHKLLSKDQSVVNENANKDADVFNTQRDLTAGIVGKSIGLKLLPAH
                     VANAHQKGDIHYHDLDYSPYTPMTNCCLIDFKGMLAQGFKIGNADVESPKSIQTATAQ
                     ISQIIANVASSQYGGCSADRIDEVLAPYAELNYQKHLNDAKDWVLADKQEEYARAKTQ
                     KDIYDAMQSLEYEINTLFTSNGQTPFTSLGFGLGTSWFEREIQKAILNIRIKGLGREG
                     RTAIFPKLIFTVKRGLNLEPDSPNYDIKQLAIECATKRMYPDMLSYDKIVELTGSFKV
                     PMGCRSFLQGWKDENGQDVTSGRMNLGVVTVNLPRIAMESAGDMDKFWEIFAERMAIA
                     KDALVYRVERVKEATPANAPILYQYGAFGKRLAKTDAVDEVFKNRRATVSLGYIGLYE
                     VATVFYGGEWETNPEAKDFTVGIIKKMKALVEDWSDEYGYHFSVYSTPSESLTDRFCR
                     MDTEKFGIVKDITDKEYYTNSFHYDVRKNPTPFEKLDFEKIYPAVGASGGFIHYCEYP
                     VLQQNPKALEAVWDYAYDRVGYLGTNTPIDHCYACDFEGDFEPTERGFKCPNCGNSDP
                     KSVDVVKRTCGYLGNPQARPMVKGRHKEISARVKHMNGSSL"
     gene            complement(30348..31091)
                     /locus_tag="AC1PJC_000579"
     CDS             complement(30348..31091)
                     /locus_tag="AC1PJC_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015424 - ABC-type amino acid transporter
                     activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HIP6619602.1"
                     /translation="MIKIRNLVKEFSGQKVLDGIDMDIEKGQVIALVGPSGAGKSTIL
                     RSLNYLEQADAGSIEIDGFTVDFTNISKEEILTLRRKLAMVFQQFNLFERKTALDNVK
                     EGLKIVKRMDDASATALAKEELRKVGLSERENHYPRHLSGGQKQRVALARALAMQPDI
                     LLLDEPTSALDPELVGEVERSIADAAKTGQTMILVSHDMNFIYQVADKVLFLENGRIL
                     EQGTPEELFHHPKEERTREFFASYSNPQF"
     gene            complement(31091..31894)
                     /locus_tag="AC1PJC_000580"
     CDS             complement(31091..31894)
                     /locus_tag="AC1PJC_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HIP6619603.1"
                     /translation="MIGVLGITGPAWYQVFLEWLPDGKLFSIRAVFDALPSIIERLPI
                     TIGLTLAGAFFGLILGLVFAIVKINRVRFLYPVQAVFVSFLRGTPILVQLMLTYYGIP
                     LVLRGLNQEYGLDWNINAIPAAVFAITAFAFNEAAYMSESIRAAIQAVSPGEIEAARS
                     LGMTSGQVYRRIIIPNAAVIATPSLINTLIGLTKGTSLAFSAGIVEVYAQAQIQGGAD
                     YRYFERYISVSLVYWALSVLIESFGRFLENKMAIQAPESVDISGVGGDR"
     gene            complement(32081..32932)
                     /locus_tag="AC1PJC_000581"
     CDS             complement(32081..32932)
                     /locus_tag="AC1PJC_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HIP6619604.1"
                     /translation="MKLRTILSLAGITALATVALAACSSTSNSSNTSSSEADKKETIV
                     MGTVGTTKPFSYRDENGELTGFDIELARAIFDGSDQYELTFETTDGSGQFPGLDSGRF
                     DLLGNNTSYTKERGEKYLYSYPTASTPSVLAVPKDTDIQSYDDIGGHSTQVVTGTTTA
                     AQLEEYNTQHTDKPVDINYTGENITQILTNINDGKYDFKIFDAPTVNAIIADQNLTNL
                     KTVELEAAEKPFIYYVFSSDNTALQSFVNDRIKALNEDGTIAKLTEQFFGKDYAPTAE
                     ELAVPNE"
     gene            complement(32965..33651)
                     /locus_tag="AC1PJC_000582"
     CDS             complement(32965..33651)
                     /locus_tag="AC1PJC_000582"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016466883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HIP6619605.1"
                     /translation="MGKPIIGITSNEKPVAEGIPIMNLSVSRNFADGIKRAGGLPFYI
                     PLSGETDVVDYVSAIDKLLLTGGQHVLPQFYGQEKLIESDDYFKERDEFELKLVYEAL
                     RQEKPILGICRGMQLFNVARGGTLKQAVEGHRSLPFDLIHQVECKEATPLASIFGQRV
                     AVNSIHSQAIENLGQGLEAIAHSVDDGIIEAVRSMDETRFLGVQWHPELLIDQSGGNQ
                     KLFDYFVQTL"
BASE COUNT         9632 a         8259 c         6450 g         9330 t
ORIGIN      
        1 ccctcttttt ccgtatcaca acggaaatta agacaacagg atcattctat aaaatacaaa
       61 aacgacctcc aatacggaag tcggttcttg ttatttacat ttattttact acgatattaa
      121 caagtttagt tggctccaac agtctgcgga tagactgttg gaggttggag ataaacaaac
      181 aaacgagaca atcgttactt gataacgata ttaaccagtt tgttcggaac actaatcacc
      241 ttcaccactg tttgaccagc gatttcagct tggacttttt cgtctgcaag ggcaactttt
      301 tcaagttcag ctggtgacag gtctttggct acagtcaagc gagcttttac tttgcctttg
      361 atttggacaa cgatttccac ttcgctttct accagcttac tttcgtcata tgttggccat
      421 gcgacatagc tgattgactg gcctgtattt gcaagaccct gccagagttc ttctgccaag
      481 tgtggcacaa atggggcaat caattggaca aagcctttgg cgtattcgac atagagctta
      541 tcttccttgt ttgctgcgtt gacaaaaatc atgagctggg cgatagccgt gttgaatttc
      601 aagtcttcaa tatgctcagt cactgtcttc acagtttcat tgtaaacttt atcaagcgct
      661 ccgctatttt ccgccacaag ctccttggtc gtcaagaggc gataaacacg gtcaaggaac
      721 ttacggctgc cctcgagacc ttcttctgac caggcgattg acgcatcaag tgggcccata
      781 aacatttcat aaacgcggag ggtatccgca ccgaattgct cgaccacatc atctgggtta
      841 accacatttt taagagactt agacatctta gcaggtgcct gctccaactc ttcaccagtt
      901 tcgatgttga agaaagaacc atcacgtttt tcaactttat ctgtcgctac aagggcacca
      961 cggctgtcgc ggtagctagt tcccaaaatc atcccttggt taaagagttt ttggaatggc
     1021 tctttggtcg gcacaactct aaggtcatag aggaacttgt gccagaagcg agcgtagagt
     1081 aggtgaagga ctgcgtgctc agcaccaccg atgtagatgt ccactggcaa ccaagctttg
     1141 agaagatcct cgtctgccaa tttctcatca ttgtgcgggt cgatatagcg gaggtagtac
     1201 cagctagagc ccgcccattg tggcatagtg ttagtctcac ggcgaccttt gacaccatct
     1261 tcacgtgtca cttctaacca gtctgtcaag ttagcaagtg gtgactcacc tgtacctgac
     1321 ggcttgatgt ctgaggtttt tggcaatacc agaggtaact cattttctgg gactgctgtg
     1381 gaagtgccgt cttcccagtg gatgattgga attggctcac cccagtaacg ctggcggctg
     1441 aagagccagt cgcggaggcg gtaagaaatt ttctcttgac cgacaccatt ttcttccaac
     1501 caagccacca ttttggcaat agcttcttcc ttgttaagac catctaggaa gtcggaattg
     1561 atatgggcac cgtcctctgt gtaaggtgct tcttctacat tgccaccttc cagaactgga
     1621 atgatgtcca agttaaactg cttggcaaat tcccagtcac gctcgtcatg agcaggaacg
     1681 gccatgatag cacctgttcc gtagcttgct aacacatagt ccgcaatcca gattggaatt
     1741 tctttgttat taacagggtt aatggcgtag gcaccagtcc aaacacctgt cttgtcttta
     1801 gccaggtcag tacgagccag gtctgatttg agagaggctt ggcgtttgta ctctgcaaca
     1861 gcctctgctt gttcagctga tgtgatacta tctaccaagt catgctcagg agcaagaact
     1921 gcataagtcg caccaaaaag agtgtcagga cgggtagtaa agactgtgaa gtccttgtct
     1981 gtgtccttaa tcttgaaagt cacattggca ccggttgact tgccgatcca attgcgttgc
     2041 atgtccttga ttgactctgg ccaatcaact tcttctaagt cattaagcaa acgctctgca
     2101 taggccgtga ttttcaacat ccattggcgc attggcttgc ggacaactgg ataacctcca
     2161 cgttcagacg ttccgtcagg aaggacctct tcgttggcga tagctgttcc caattcttct
     2221 acccagttta caggcacttc tgcctcatag gctaggcctt tttcatacaa tttggtgaaa
     2281 atccactgag tccacttgta gtagttaggg tcagtcgtat taacctcgcg gtcccagtcg
     2341 taagaaaaac caagggcgtt aatctgacgt ttgaagttgg caatattttc cgccgtaaag
     2401 tcagctgggt catttcccgt gtccatagcg tattgctccg ctggcaaacc aaaggcatcc
     2461 caacccattg ggtgaagaac gttgtaaccc tgagcacgct tgtaacggct gagaatgtcc
     2521 gtcgcagtat agccctcagg gtgaccaacg tgcaagcctg caccagacgg ataagggaac
     2581 atatctaggg cataaaagtt tggcttgtcc gcatctgttc ccgtcttaaa agtatgattt
     2641 tttgcccaaa attcctgcca tttgggctcg atttccttgt gattgtagaa gctcatatca
     2701 tttctccatg tcaataaatt atctttacta ttatatcacg aaataaggaa agaaaaaagg
     2761 tagaaataaa cgcaaactgc tgggtatcca gagtaaaaaa caaaaataat gttgtttttt
     2821 acatcaatcg atcatcattt ctccaagtat ccctttaaat cctcaatcgc tcccatccca
     2881 tcttgtaatc cagcctggta aatttcttca aatttttctg gattcttctc taaacggcca
     2941 atttgtaaag cttgatgagg ccggataaca taaatctggc cttcattttc tagctggata
     3001 attttttcga cagtttgatt ataatgttga taccgttttg atgcgacaga tacaaattta
     3061 ggatactttc tataaaacat gcggtaaatc cgtccgcttg aagccttttt acgataagta
     3121 attggctgcg tcaagataac aatgagtttg tcaaagccaa gacttttggc aaattcaaca
     3181 ggaatagaat ctgataaacc accatctagg tattttttac catcaacttc gacaattttt
     3241 gaaacgagag gcaatgctga actggcgcgc aacaattcca tttgctcaaa gacatgatca
     3301 attttgtaat attctggctg accggtttca atatttgtca ccgtcacata gaacggaatt
     3361 cctgactgcg caaaagcatc ttgatcaaac ctatctaact ccattggtac cttgtaataa
     3421 gtaaagtctt tgttgaccat atttcctgtt gtcaaccagg atctcaatcc catataatgc
     3481 ttatctttaa taaaacgctt attatagcga atcgctctgc ctctttgttt ggaaaggaaa
     3541 ttaacgccaa aaagtgctcc tgcggaaact gaaacgaccc catcaacatg aatatcagca
     3601 tctaaaaaag catctagaac acccgcagta taaaggcctc gcataccccc accttctaaa
     3661 actagaccaa ctttcatctg tagcacctcc taaaattacc ttctattgta gcaaaaaatc
     3721 ccgtcgaaac gagatttttg ctatatgata ttcaatgaaa cttaacatcc gactgggtaa
     3781 tgcaggcaca gcttaggatc tgttcttttt tctatttcaa gggaattagc tgaaaagaac
     3841 cactagaccc ttttacttag caaatcgaat taccaaggtt cgatgttgag tgttacaata
     3901 ttaccaaata atcacacggt cttcttttgc acgccacatg ccgtcgcctt cttgaacgcc
     3961 aaaggtttca tggaattcat cgaagtttgg caactggatg ttggtgcgta ggtgacctgg
     4021 tgcatggaca tcgacactag ctaacatctg catgaactca ggacgggcct tcattcgcca
     4081 gatgcgagca aagttagtga agaattcctc tgcgaagaag gcatcttctg acttggctgc
     4141 ttctaaggcc gctgcaatcc caccaaggtc agcaatgttt tctgacacgg tcaacttacc
     4201 attgattttg gcaccgtaag aatcctgacc ctcaaactgg tcgataacct gctgggtacg
     4261 agattcaaaa gctgcatagt cttcttctgt ccaccagtta ttcaagctac catgctcatc
     4321 gaaggaagca ccgtttgagt caaaggcatg ggaaatctcg tgggcaataa ccgcaccgat
     4381 accgccgtag ttagctgatg aagattgctc cagcgagtag aatggcgcct gcaaaatggc
     4441 tgctggaaag acaatcaagt tcttctgtgg attgtagtag gcgttgacca tgtgagcggg
     4501 catgccccat tccttaatgt ccacaggctt gttccacttg ctccaaccat gagcaatgtc
     4561 aatcttgttt agttcgatag cattttccac caaggacttg cttgggtcaa caatcttctt
     4621 ataataacgc tctggcaagg cttctgggta gccgatataa ggcttgatga cattgagttt
     4681 gacaatggcc ttgtcacgcg tttcctgagc caaccagtct gccgtttcca aacgagattt
     4741 gtagacctca atcatcttgg caacttttgc ttccacgtca gcttttgctt ctggtgagaa
     4801 tttctcccca gcataccaaa gaccgagggc ttggttaaag tagccttgtg ccaagttata
     4861 ggctgctttt tcttgatttt gagcctgcgg tgtaccagaa agagcacggc tgtaggctcc
     4921 tgctagaata cggatttcat ccgacaggaa ggctgtataa gttcctgccg ctttcaaaat
     4981 caaggtcgcc ttcaaaagct cccaattatc cgcactgtaa atgtccttgg cagcctgcca
     5041 gaaacgttcc tcaggcacga taatcttgtc tggcgtttga cctaaaatcg ctgtgaagaa
     5101 atcatccaaa ggcaactctg gtgccaaggc agtaaaatct gcccactcgt aggggtggta
     5161 aagtttggcg tactcagaac cttcttcatt tgatagaaca tacttggcaa tcatggcatc
     5221 tagttccaaa cgcttgtcca agaggtcctt gatttcctcg tcgctaaaac caaattttgg
     5281 caggagggct tcctggctct cacgccaagt cttgagcaat tctgcacctt tttcatgccc
     5341 ttcctcatag taggtcgtat ctggcaagat aatgcctaga gaatctgccc agaggacatt
     5401 ggtggtcgca tccataaagt caggtgccac accgaaaggc atgaggtttg gcttgcctgc
     5461 caactcatat tctgccaact tgctggtaaa ttcttcgaaa gagttgagag ccttgtactc
     5521 tgcaatcaag gcctgagcag gttctgcccc caaacggtca cgggtttcat agtcggctac
     5581 ttgtttgtga aaagccacga agttttgcaa aacgctatct tctgggacat cttctcccgc
     5641 caaccaagcg tttgtcgtgt caatcatgag cttttcaatc tcatccgcca agtccgtgaa
     5701 accacctgtt cttggcttat cgtctggaat cacagctgtt tttgcccatt caccattgac
     5761 gtattcgtaa aaatcatctt gtaaacgtgt cattgatttt ctcctttgtc tttcttaatg
     5821 actataataa caaaaaattc tgacaatttc acttatcaga tgaccgtgac caagtatttt
     5881 ttagaataat actcgaacaa accacaagaa ggctgacaac ggcacaggtc cctgacatgg
     5941 ttaaatccag ttgattggcc actaaaaaac caagcacaac cgttagaata gcgatacctt
     6001 gccctaaaag aagcaattgc caaaaggatt tgacccaacg tagggcagcc atacttggtg
     6061 ccaccaagaa aacaataaca gtcatcgagc caatcgcttc gaaggccaga acagtagtta
     6121 aggaaactag aatcaaaata accatttcta aaatccttgt tcgtaagcca gacaaacgag
     6181 catggttgct atcaaatagg tacacttgta aacgatggta agcccaaaca aaaaatagaa
     6241 caataaccaa ccaagccaaa ctcgacttga ccagactaac agggagtgac caggctagaa
     6301 catccatacg atggagcgga gcaaaaagta cttccccctg caaaaccaga tccacatcca
     6361 agtgaacatt gcgagcaaaa agagaaataa gcaaaaccgc cactgcaaaa aagcaagaaa
     6421 aaactagacc tgttgcggca tcatgcgcta tctttcgact atgcagacgg tcaatggcaa
     6481 gaaccgataa taacccaaac agactggcac caactattag caatggcgaa tccaaactat
     6541 gactaataaa aaatcccaga acaatcccaa gcaagacaga atgcgatagc gcatctgcca
     6601 acatcgattg attttttaca accagtatcg agccgagcaa gccacaagaa ctagcaataa
     6661 ccatcaaaat gagtaatact tcaaacacga ccattctcct ttctgacata ggtaacatac
     6721 acaaatgcag acagggtcag acctgtcaga cagacgataa tagtcggtcc ggtcgataaa
     6781 ccagatacac tagagctaat ccaggtccct acaaaagccg acccaattgc aacgattcct
     6841 gccagtaata gactcttgtg atacgatttt cccagcatca agccaaagac agctggtgca
     6901 atcaaaaaac tactcatcaa aatagctccg actaacttta atcctactgc aattaggcaa
     6961 atcatcaaaa acatcgtcaa ctgctgtaag taccttacac gaacaccaat aacccttgca
     7021 aaagtttgat caaacagata cagcttatag tcttgataaa agaaagcaaa caataccaaa
     7081 gccaatagag aaataattcc gatgagtatc acatcatcca gctgaataaa ggctgcctgt
     7141 ccaaatagat aggtttgcaa tccagcttgg gaagcccctg caaaggcttc atttccctga
     7201 atagcatttt tcaagaccat tcccaaacca aagaaagaag cagataccaa tgaaagggca
     7261 ttgactagac tgtgaccgcc ttttcgacgc agccaatgga caagtgcata agaaaggtag
     7321 cctgacaaca ctgctcctaa cagcaagtag agaggatgtc gcgactgaaa aatcatgaaa
     7381 gagacaatca ctccaggata agaagcatgc ccaagagcat ccccaagcaa actctgttta
     7441 gtaagaacag atatacttcc gatagtactg gctgccacag ctaggctgac ggtccctaaa
     7501 gcaactgtcc agaaagaata ctctttgaaa acctcaaaca tggctgcctc ctttggcatt
     7561 tcctagaaac agcccatttc ctatgccgta ggtcgcctga taattctcgc ttgtcaaagt
     7621 ctcatccatc ggaccagagt caatcacatg cttatgaagc cagacaaggt gatcaaagta
     7681 ggcatccagc gtcgttaagt catgatgaat gacaatggaa gttttccctt caccttggaa
     7741 ctccttgagc atatccatga tcatgatttc tgttgcctga tcaatccctg ctagaggctc
     7801 atccataaga tacaattctg cttcctgcgc cagggctctc gctaaaaata cccgctgacg
     7861 ctgcccacct gaaagctgat caatctgacg atggcgtaaa tctgcaattt ttaaccgttc
     7921 tagagcctgc tcaacaatct gtctatcagc cttagtcggt cttctaaaca tccccttact
     7981 atgagcgaag cgtcccatca gaacaatttc aaaaactgtt gcaggaaatt gccagtttac
     8041 ttgactggac tggggaatat aggctacttt ttgagcaatc aacctctcta gacctgcctc
     8101 ctgaccaagc aagcgaacct gtcctgtgtc aggtttttcc aaccccaaaa tgaccttgaa
     8161 tagactggac ttcccagcac catttggtcc aacaatagcc gtccgactcc ctctgggaat
     8221 caccaaattg acatcttcta aagccatggt ctggctggct gtatatgcta aattgacatc
     8281 ttttaattca atgattgctg acatatttcc tcctattttt aaaaatgata tacctcattc
     8341 atactcaatg aaaatcaaaa tcagaccaac ctaccaagct gagaaagtag ataagattaa
     8401 gataccgtac caacaaattg ctggcaagcc ctatacatcg cttatttcaa cacatcagta
     8461 catgaatttg attttcgcag agcaccaatg cttctttcaa ttgtatgttt ataattctgt
     8521 taaaaatggt ccaaaaacgg aaagaactcg acctagaccg agtccttttt actactcatt
     8581 tgaaatccct attcacgcac agactactga tatatgaagt cccgctgtga accaacagca
     8641 ccgaggtcta caaacagtat ttctagtcaa ggacctcaat aactggtgtg atttgctact
     8701 aacgcctatc ctcccccaag cgttgtcacc tcctatagaa agagtcctat actgcttgtg
     8761 ctcgaaacaa ttgattatcc ctcatattgg tacctatcaa ctctatcttc ggtaatatct
     8821 ctagtcttca ttgaatagca agcccgctcg acctctacta tttcagatat ttaaccatca
     8881 atttaacatt atgtttgtac atgtcgataa aggtatcccc ttcctcacct tctggtgcca
     8941 aagaatctga gaacaactcc ttaccttcgc cagtaacaac ttcaacctga ccgcctttgg
     9001 cttttactgc ctcttgcaat ttctccatgc gttctggatt agttgtagac tctgtaaaga
     9061 tagccttgat attatggcca atgattaggt taactgtctc aatcatgtca ctattagcca
     9121 cttctgagtc ggtgctcacg ccttgaggag catagagagt gaagtcataa ctagcagcaa
     9181 agtaattaaa ggcatcatgt ggtgttacca aatagcgact ttcttttgga atcacactta
     9241 attctttttc tacccaggca tgcaaatcat ctagctgcgc ttggtatttt tctgcatttt
     9301 tctgaatcat ctcagcttta gcaggcaaga gtttttgtag ttcctctgaa gctacagcta
     9361 cagctgactt gtacaaggga attgaaaacc aaaagtgcgg atcgacaatt tcttccccat
     9421 cctcatccat cgtattcaag tcttttgcat taaagttttt agaaacagct actccggtct
     9481 tctccaaagc ttcaaccatt ttaccttcaa agtgcaaacc gtggtagaga acaaggtcag
     9541 ccttttgtaa ttttgataaa tcactagatt tggctacgta caaatgaggg tcttctcctg
     9601 ctggaatcag caaatcacgt tccacctcat cacccgccaa ctgatagacc atgtcattga
     9661 gaaaggaagt agtcacagcc actcttggct tactagagcc ttctgtggtt tgcgatggac
     9721 gacaagctcc tagccctatt agggacaata gcagagcaaa actgaacaat attttcttca
     9781 tataggttct ccttttattt ttattaagca tacctaacta tataattaga ttaagctaaa
     9841 aaattcgttt tgtcaactga tttttaaatt ttttgatata atagtttcag tagaaagcga
     9901 gttctcatga caccaaacaa agaagattac ctaaaatgta tttatgaact gggtcaatta
     9961 gaccaaaaaa ttaccaataa actcatcgca gagaagatgg ccttctccgc accagccgtt
    10021 tctgaaatgc tcaaaaaaat ggtagccgaa gagctcattt ctaaggatgc caaggcaggt
    10081 tatctcctca gccaaaccgc ccttgaaatg gtagccaacc tctatcgcaa acaccgcttg
    10141 attgaagtat tcttagttga gcaacttggc tactctccag aagaagtaca tgaagaggct
    10201 gagattttag aacacaccgt ttcagatcac tttatcaatc gcctagacct gctactggaa
    10261 cagcctcaaa cttgtcctca cggaggaagc attcctcaag caggacaacc gctcatcgaa
    10321 cgctaccaaa cgcggctgtc acagctaact gagacaggga actaccagct tgtccgtatc
    10381 catgacttct atcaactcct tcagtacttg gaacaacatg aattagctgt cggcgattta
    10441 ctaaccgtca cagacttcga ccactttgcc caaaccatca ccatccagta caaggacaaa
    10501 gagctcgccg tcccaacagc cattgctcaa caattattca tcgaaaaaag caatcgccca
    10561 gcctaaacaa gctgagcgat tatttttttc tcacattacg gaaaatagat ctggctgcaa
    10621 aaaatagttg cccacataca tacactaacc aaagtaggaa acctatataa aaacagccca
    10681 atagaaagtg agggttatag gttaaaggtt gcaagacaaa catgagaatc cctaccaacc
    10741 cccaccgcat accccaggtc atctttctct ggataatcca ctccaaccaa tcttctccaa
    10801 ctgaacttct ggtctccaga tattcttgat tgagatcttg aaaaaatttt ctcatattct
    10861 tgctcacctc atcctaactt caaagcataa actaccactt tgcaacaata ttattatagc
    10921 acattgtttt caaataacca atactgtcaa aaaaaccagc ctactcgggc tggttttctt
    10981 ggagtcgctc tcttaggcga cgacggtata aaatctgcga tggaatgaag taaagaaaac
    11041 ttgccaaaat aatccaacgt ttatctattc cactaaagta aatcactaaa atcaaaagaa
    11101 aggcaatcgt caaataaaag aaatgatttg tgagcaattt tttcatagca gcctccatac
    11161 ctatttttca atattagtat atcaaaacac acaaatagag tacataccat tgccaaaagt
    11221 tttacttatt tttcgtatcc aaaacaatgg tcaccggccc atcattgacc aggctaaccg
    11281 ccatatccgc cccaaaaacg cccacttcaa ccggcacaaa ggctgacaag gcctggttaa
    11341 aagcatcata gagtcggctg gctagggcag gagctgccgc tcctgtaaag gcagggcgat
    11401 tgcctttttt tgtgtccgca aagagggtaa attgggaaat ggataaaatc ttgcccgcca
    11461 catcttgaac ggacttgttc atcttgcctg cctcatctga aaaaatccgc atattaacaa
    11521 tttttcgaac agcatagtcc agatcttcct ggctgtcatc tggccccaca ccgactagga
    11581 gcaaaagccc ttgttcaatt tgcccatgga tacttccttc gatggtcaca ctggcctgtg
    11641 atacacgttg taatacaatt ttcatcttat ccgttggtcc ttttcactga gtaaacttct
    11701 ggcactgact taatcttgtc caccagactg gtcaaggttg ccaggttgga aataccaaag
    11761 gaaacgtgaa tggtcgcaaa cttcatatcc ttggttggct gggcattaac cgaagaaatg
    11821 ttcttgctgg cattggtcaa aaccttgaga acatcgttga ggagacctga acggttgaga
    11881 ccgtagatgt caatgtttgc catatattcc ttggtcgaat tctcatcctc ccagtccaca
    11941 tcaatcaggc ggacatcata gttttcctga ctcttgaggt tcatacagtc tacacggtga
    12001 acagctaccc cacgcccctt ggtgatgtag ccgacaattt catcgccagg tactggatta
    12061 caacatttag caatccgtat cagcaagcct gacgcccctt caatgaccac accaccttcg
    12121 tgacggattt tcagactatc tttattatca tgtttgactt caccaccgtt gaccaattca
    12181 tccgcgacag ctttggcctt agcccgctca gcttcgcgac gttctttctc tgtcagacgg
    12241 ttaaagattg atatggcaga aacttctcca aaaccaactg ccgcaaaaag ggattcgtcg
    12301 gtcttatagc tggtcttttg caggacctca tccatgtggc gacggtccag gtattggttg
    12361 ggaacgtagc cattttcttg gagtaggttc tgaagcatct cacgcccttt tgaaacagac
    12421 aattccttgt cctgattctt gaagaactgc ttgattttat tgcgagcctt gtgagtttta
    12481 accagattga cccagtcacg acttggaccg aaagagttgg cagaggtgat gatttccacc
    12541 tgatcgcctg tcttaagctt ggtcgtcaga ggaaccatac ggccgttgac cttggcacct
    12601 gtcgcccgct cgccgacctt ggtatgaatc tcataggcga agtcaatcgg tacggagtcc
    12661 ttaggcaatt cacgcacagc accatctggc gtgaaaacgt aaatacgctc tgtaaaaata
    12721 tcgtccttga cagaatttac aaaggtctgc gcatccccag ccccttcttg gagttcaatc
    12781 aggttgttaa tccagcgcaa ctctttttca ctagcagttg ccttgccacc acgcttgtaa
    12841 gcccagtgag ctgccacccc gtattccgcc acctgatgca tttccatggt ccgaatttgg
    12901 aattcgattg gacctctcgg tccgtaaacc gtggtatgaa tagactggta gccgttagct
    12961 ttttggttgg caatgtagtc cttgaagcga cctggcatag gtttccacaa ttcatgaata
    13021 taccctaaca tagcatagac atcactcgga gtatccatga tacaacgaat ggcaatcaag
    13081 tcatagagtt gatcaaaccg ctttttctta tcgtgcattt tgcgatagat agagtaaata
    13141 tgcttgggtc taccgtaaat ctgaccatgt agatggcgct cttctgtata gtctcttagc
    13201 ttatcaacaa cttcattgac caactcttcc cgttcacgac gcttctcact catcattcga
    13261 gtaatcttgt agaattcaat ttcattgaga tagcggaaag acatgtcttc caattcccac
    13321 ttgatagaag aaatacctag acggtgggca agcggtgcat agatttccat tgtttcacgt
    13381 gaaatacgtt cctgcttgtc cttgcgcaag tgcttaagag tccgcatgtt gtgaaggcgg
    13441 tctgccagtt taaccagaat gacccgcata tcttgggaca tagcaatcag catatttcgg
    13501 tggttttcag ccaactgctc ctcatgagac ttatactcaa ccttacccag tttggtcaca
    13561 ccgccgacaa tatggcgaac ctctggtcca aattcagcct ccatatcatc caaggttaca
    13621 tccgtatctt caaccacatc atgtaagaaa ccacaggcaa ccgtcacagc atccagcttg
    13681 agtcctgcta aaatacctgc tacctggatc gggtgtacaa tatagggctc gcccgattta
    13741 cgaaattggg acttgtgtgc ctctgtcgca aaatccaaag ctttcttgac aaatataaca
    13801 tcttcttccg gtaaataggt ggctgtcaag gcaaccactt cctccccagt gtagttaatt
    13861 tctttcatat ctctactctt cctcttatat ttcctactat tctaccattt tcacgaaaaa
    13921 agaaaaagga atctaacata agactactaa ttacacgcaa ttcaaaccaa gtttagattc
    13981 agcgaacgtt cttgttttct ttcgttttct tgttgttttc actcgttttt caaacgaacg
    14041 ttcagaatta gtcttgaatt ttgcatttct tagctgtata atgattgtag aagattatta
    14101 caaaaagaaa atggaggatt cttatgaatt ttcgtttcag taagtgtgcc gtagcactca
    14161 cactagctct cttagctgca agcaatccaa aattagctca agccgaagag attctcaaca
    14221 caactccagc ttcttcaaca gaagcaagtc aggctgtacc agttgaatct gacaccacag
    14281 aggaagctga taatacagaa tctcctgttc cagccactac cgaagctgaa aatccaagct
    14341 cttccgagac agctgaaact agtgatccta caagcgagac aactgactca actgcttcag
    14401 aagcacgtac ggtcactcct gctgcaactg aaactagtca gcctattgaa ggacaaactg
    14461 ttgatgttcg cattctcgca acaactgacc tccatacgaa cttggtcaac tatgactatt
    14521 accaggataa acctgtagag acactgggtc tagcaaaaac agctgttctt atcgaagaag
    14581 caaaaaaaga aaatccaaat gtcgtattgg tagataatgg agacaccatt caaggtactc
    14641 ctcttggaaa ttacaagtct atcgttgatc ctattgaaga aggtgaacaa catcctatgt
    14701 acgccgcctt agagactctg ggatttgacg tcggcacact tggcaaccac gaatttaact
    14761 acggccttgc ctacctcgaa aaagtaattc gtacagccaa catgcctcta gtcaatgcca
    14821 atgtcctcga tccgactacg aaagactttc tctacacccc ttataccatt gtgaaaaaga
    14881 cattcacaga caccgatggt aaaaaggtta cactaaatgt tggtgttaca gggattgttc
    14941 cccctcaaat tctcaactgg gacaaagctt atctagaagg aaaagtgatt gttcgtgatg
    15001 cagttgaagc cgttcgcgat attatcccaa ccatgcgaga aaatggcgca gacatcgttt
    15061 tggtcctttc ccactcaggt atcggcgatg accaatatga agtcggcgag gaaaatgtcg
    15121 gttaccaaat cgccagcctg tcaggagttg atgcggttat cacaggtcac tcccacgcag
    15181 aattcccagg aactgccgaa aaaccaagct tctatgctaa atactctggc gtggatgata
    15241 caaatggtaa aatcaacggt actcctgtca ccatggcggg taaatacggt gatcacctcg
    15301 gcgtcatcga cctcaatctg gtctttaaag atggcaaatg gacaactact tctagcaaag
    15361 cggctattcg taaaatcgat acaaaatcat ctgtagcaga tggtcgcatc atcgaccttg
    15421 ctaaagaagc ccataacgaa accatcaact atgtgcgcca acaagtcggt gaaacaactg
    15481 ctccaatcaa cagcttcttt gcccttgttc aagatgatcc ttctgtacag attgttaaca
    15541 atgcacagat ttggtatgca aaacaacagt tggcgggtac ttcagaagct aatctaccaa
    15601 tcctatccgc agctgcacca tttaaggctg gtactcgagg cgatgcttca gcctatacag
    15661 acattcctgc tggcccaatc gccatcaaga acgtagcaga cctttacctc tatgacaacg
    15721 ttgtagccat cttaaaagtc aacggtgccc aactcaaaga atggttggaa atgtccgcag
    15781 ggcaattcaa ccaagttgac ccaagctcaa cagagccaca aaacctagtc aacacagatt
    15841 tccgcactta caattttgac attattgacg gagtaactta tcagtacgat attacgcaac
    15901 caaataaata cgatcgtaac ggtaaggtag tcaacgaaac tgccagcaga gttcggaact
    15961 tgcaatacaa tgggcaagat gtgacagctg atcaagaatt catagtggtg accaacaact
    16021 accgtgcaaa cggtactttc cctggggtcc gcgaagcttc tgtcaattac ttgctcaacc
    16081 tggaaaaccg ccaagccatc atcaattata ttatcgctga gaaagttatc aaccctacag
    16141 cagacaataa ctggaccttt acagatagca tcaagggact cgacctccgc ttcttgacag
    16201 cagatcgtgc gaaaactcta gttgctgacc aagaaggtat tgtctaccta caggcttcaa
    16261 ctgccagcga agggttcggt gagttcaaat tcgtctacac tgaacctaaa gtagcgactc
    16321 cagatgaaca acagtcagat caaggtaaca caggtcaaga tattgtactc gaatctggtc
    16381 aacgaattac ccttccagcg gtaaatccac ctgctcctgc tccacaacat aaattggcta
    16441 gtccacattc acaagcgagc accaagacac tccctgcaac aggagaagct acttctatgc
    16501 ttagtctgct cggtctcact ttgattggtt ttgtcggcgc atggactaag aaaaaagaac
    16561 attaaaataa tcgggagtgg gaaagacatc catgatggct ccgccctcac ccacagaata
    16621 atgaaaacga acacaaagcc ctcactaggt gtataatctt agtgagggct ttgtggttga
    16681 cgagttaatg atgttagtca tcgcgggaac tcgacaaaga taaaaagagc tcgtcaacaa
    16741 tttttcgttt taagttgttg agctgaaaca gtctatcccc agactgtttc actcccaccc
    16801 ccacacagct caaactgtct gggagacagt ttgaggctgg agatgaagcg aactctgttc
    16861 gcatcagtcg tataggtcag atttggagtg tgaaacacga acaaatctgc caatcaacca
    16921 ctgcgctgag atgttgacac gaactctgag aagcgaggat ggactttttg cccagcctct
    16981 tttaccctca tacactctct agataaatta atcaaagcat ataaaaatag ctcgaagacg
    17041 tactcgagct atttttatat ttatatcact actcccaata aatcggtaca tagcgggttt
    17101 ctttgggact ttttactgta taggttccca aatctaccca gtttgattgg ttcgctaacc
    17161 gctgttctac tctaaactcc tgacaaagga tcgttgtttc taagcgaatg tttccatact
    17221 tccttgcaaa aacagggtaa gaaacgcttt ctgaagcaaa gacgagattc cccaaagccg
    17281 attttctagg acgcctaaac tccataattc tgccttcttc tccaccataa atcgaagaaa
    17341 tcagattttc actcataatg gtttcatgat aggttgtttc gagagaagta cgactatcag
    17401 acgcttgaaa acctcgacta gacgtactcg atagttgacg aataaaagcc tttctcactt
    17461 cataattttc aaactcatag gtctgctctg ttgcttgatt atacaaaatc aattccgaga
    17521 taatctgata gctagtccct ggaactctac cgaattgatt aagagcaaca aagactatca
    17581 agaaaaatcc aagagcagta aaaataggtg tactcaatct tttcatgggc aatctccatc
    17641 acatatctcc tcaatcttcg ctaattgcaa cgaccattga gctatgaacg aatccatcac
    17701 gatcctgttt gttcgaatcg ttcggagcga tacattcact atttgctaac gtgtgttcga
    17761 gactattttc tctctttaga tgataaatca ttcactttat tacaacaata gtatatcaat
    17821 atgattttga aaaaacaact aatcaggtat gcaaatgtaa accagatcat gtaaaatatg
    17881 accaaataac tgcaatcacg atggccggca acatgttggc aacgcgaatc tttttgtccc
    17941 agatgatatt gacaccgaca cagaagatga gggcagagcc gataaaggag agattagcaa
    18001 gggcctgatt cgtcatcaaa ggttcaatca ggcgggccaa aagagtcaca gagccttgaa
    18061 agaaaaaaac gggtactgct gaaaagcctg ctcccttgcc caaactcgag gtcataatca
    18121 aaatgataat aaagtccaaa atactcttaa cggccaacaa gcgataatca cccgtcaatc
    18181 catcttggat ggctcctagt atggccatag caccgataca gacggtcaaa gaagctgtca
    18241 ggaaagcatc taagaattga ccatcttggc tgtttcctga tttttcacgg agccaaacac
    18301 ccagcctttc aaaccagcct tcaatatgca gtacttcccc aatcaaggtc cccaaggcta
    18361 gactaaggac caaaagcatg ctattttgac ttttgagttg accatcaacg actgtcagca
    18421 gtccttctaa actacctgaa attcctagaa ataagacagc tagcccgctc gccaccgtta
    18481 gtcctgactg atgccgttct ttcagtaaat gtccaaacca agatcctagc aaacctgcta
    18541 gggcaatggc caccgtattg ataatggttc ctaatgcgaa catgatcctc ctttatgatt
    18601 cactatcatc tggcaataga taataaactt ttccatcttc aaccaacaat ttcacattct
    18661 ccccataatt gttaacagac aatcgcttac tagattgata ggaaacagtt tcttgttctg
    18721 aaattagctt aactgtccgt tttcgaacat caatgtaacg aatggcctta tttagctctc
    18781 cagccgcttt accaattcca aaacctgctg ctgcaccgac aaggcctcca agaaagccta
    18841 ctccagcagc aacatgggca ttcttatcca actcttttgc aatatctgca actactttca
    18901 taggaccctc ttgggtacgt ctattgcgct tagtgtcaat ttggaaaaat tttatcttat
    18961 ctttgtgcca attggctatc ttttcaccta gactattaca attgtttaga tagtactcat
    19021 acacatagta actactatcc tctgacgcca ctccttgcga gaagactaga tctagcttac
    19081 taagttccgc taataatctc aacaaggttt gttgatagaa taaattagta cttaacttct
    19141 caattaactg ttcatacttt tcaaaagata atccttttcc cttagtgata ctctcttcaa
    19201 tagctagatt gacctgttct agtaacttgg ttacttcagc acggaagtta gcacactcca
    19261 tcaactttag tcttgcaagt tcagcatttt cgacatagtc tgctgaaaat tttgatagtt
    19321 gagaaatatt aactatcaaa gcgcgaacag tccctttaaa ttcccttact tgaaaatcct
    19381 taacatcgtt caacgtttct ttcattgaat caagctgacc attgatttca gccatataat
    19441 actgaccaac taccatagca gcgacctgca tagctcctga aacagcagct gcagcttttg
    19501 ctccttttgc aatttcaact tgagcaggag ttagtattgc atgagcctta aattttcctt
    19561 ctgcaccttt aacaaaagca cgatacttat ccgtttcccc tttgattttg tgcaaatcgc
    19621 ctatcggcaa atccacttta aacaatccct taggaatatt aggctgtccg gctttcttaa
    19681 gatgatgttt aagtgctggt tgaactatct tttcaacatg agccaaaata ttcggattcg
    19741 taatttcata tctctgatat gctgatgaat ccaactcact cattttctga atgagagcaa
    19801 agcaatcatc cgaaacaatc aattctcggt gttccttttg ttctaattca ctcatctcca
    19861 gattctcctt atctcaacaa ttccgtcgcg tagctaatag cagaaagggc gtagagggga
    19921 gccgtttctg ctcgcaagat acgaggacca agacctgtct tgaccgctcc tgctccttca
    19981 aatgcggcta cttcctcagg cgacacgcca ccttctggac cgacgatgac aaggactgat
    20041 tggccgattt ctaagccaga caagattttc actagattgg cttgttcgcc ttctttggcg
    20101 gattcttcgt aggctaagat aatctggtca aagcctgcta gttgagctag gaaatccact
    20161 tttttctcaa acaagcgaac agcaggaatg cgattgcgtt tgctctgctc ggctgcgcct
    20221 tgggcaattt tttctaactt ttctgctttt tttgccagtt ttttaccgtc ccatttgacc
    20281 actgaccagt ccgctggaaa ggcccagagg gctgacatgc ctaattccgt tgccttttgg
    20341 gcgacaaatt cgagcttatc tcccttagga aagcccatgg caacagtaac ggaaacgggt
    20401 aattcgacat tatctgccag ttcttcgata acctcaacag attggttctg gctatctacc
    20461 acgcgcgcca agcgtttaat cccgtcgtca aagactagga caatctgttc atctgcctgc
    20521 aagcgcatga cagaaaacat gtgcttggca gtgtccttat cgctaatctg gaacacgcct
    20581 tgcggtgctc tgccattgac aaaatactgc tgcatcctag cctccaatca cacctgagcg
    20641 gtcagtcgtc ttcttaaaga cgcagcaatt ccactcgccc tgaatcatat gggtctcaag
    20701 gaagaagcca gccgcctccg cagatgctcg caccatgtcc cacttgtccg cgatgatacc
    20761 gctcataatc aggtaaccct cgtccttgac cagacggtaa gcatcctcgg tcagatggat
    20821 gagaatgtcc gccaagatgt tggcaacaat gacttccgcc tcaatgtcaa tgccacgaag
    20881 caagtcacct gccgcgacat gaatattgct agtattggcg ttgaggtcaa tgttttcctg
    20941 agctacacgc accgccacct catccaagtc ataggcataa atctccttgg cacctaggag
    21001 agagctagcg atggaaagga cacctgaacc ggtgccgacg tcgatgaccg tttcaccacc
    21061 acgcagggcc tgagaaagag caaaaaggct catcttggta gtcgggtggg tacccgtacc
    21121 gaaagccatg cctggatcca ggcggataat tttctcacca gctgtcgcct cgtagtccgt
    21181 ccaagacggc acaatggtca aatcatgggt aatgcgggct ggttcataat atttcttcca
    21241 gttgtccgcc cagtcttcct ctgccaattc ctgactttct aggctgacct gacctgtttc
    21301 caagccaaag cctgtcaaat ccgccaagcg agccgccaaa tctgccttaa cttcctcaat
    21361 atccacagta tcaggataat aggccgtaat cgcaatcata tctgactgct ctacctcggg
    21421 atagagctcg ccgaaacggt cttcctgccc cacatagtca gccgagtcgc taatagccac
    21481 cccctgactg cccgtttcaa tcatgagatt tgaaactgtt tcttctgcat cacgatgcac
    21541 gtgaatcgtt aattcttgcc atgagttcat gtttgttttc ctttcatttc actaatagtc
    21601 atactgatac tgatggggat atttcctttg tccttttatt cacaaaggga gcatagaaac
    21661 ggcgactcta tgccattaag ggtgttacta ttcatcaatt tctgaaaaac cctccatata
    21721 tttgtttttt atcctattta gagggaggct ttttttctca tttcattttt cacccactct
    21781 tctgtaagta ttagctctac atcaggtttg taaaatgtgt caaatggact atcttcagtt
    21841 agcttatgta gcctttccca aagtttaacg actgtattga cacacagcct tgcaaactct
    21901 gtagtggcaa tctccatagg ccagtccata ataaaaaaac cttgtttccg aactgttagt
    21961 tgtcttcttc tgagttcagc aacttctttg gctggtcctt catagaaact atttttatag
    22021 tgaataattt catttctaat ttttaaaaca agctgaaaat cctgccacaa cgattcatct
    22081 ttcgagagta ttccttcacc caataaaagt tttggataaa ctaaggtttt cgttttaata
    22141 tcccatttgt ccaacgcctc ttgagcttct ccaaaaatag taacacttct gacaaaatcg
    22201 ttttggaagg cactgttaag caggtattcc cataagttta tggcgattac tggaatatag
    22261 aacaaagagg aattataaaa atttatcccc tccccctcat tgctctcatc aatactagct
    22321 aaaattgtac gaaccatcat gaagtatagc tcttgtggaa aagcagaagt tcttgctgga
    22381 aatttcggaa ttctttttct atcttggctc atctcaatac ctcggatatg ggtaaaattc
    22441 cccttccacc aaatctgctc tgcctttttc aaaagcctcg ctatcccaag caatcgcaaa
    22501 ttcttgggct tctgggtccg ccaaaaagtc catgaggtcg tctaaacctt ggtcggcggt
    22561 gtccttgaga aagcctgcga agtaggtcag aaactctgcc gaaaagccct tcttggcgtc
    22621 aaagggcaga gcgaccaggt agtcttccgc gtcaaagcga gacttgtcct gattgtagaa
    22681 aaggacatac tcctccagga aaatatcctc cgcagaagca ttgccttcgt cgtccaccgt
    22741 ttcaatccca gacgcgttct gtgcttctaa gatgaaagcc aactcaactg cgtggttttt
    22801 cttatcccag ttgagctcgt aatcataagt aaaatgttta tccaatgcca cttccagcac
    22861 atctaaaaag ccatgttttg ccattctatt tcctcttttc tataaattcc agtaaattta
    22921 tttctcgacc gtatttgaca gaagcccgct tgtctttctc caaaatggac ttggttaaat
    22981 ctagtcgatt caccgctgcc aagactacag catagtgaat aacatcagct aattcttctg
    23041 ccaaacgagc aaagctgtct tcttcgccgt ccatcatctt gcggcctgca cgcttgttca
    23101 gtagctctgc cacttcacta atttcttcca ccaatttcat aaagagactt tgctcgggca
    23161 ctgtcgtccc atagtggtca cgcaagtatt cttccaaaac actcaccgtc aactccgcca
    23221 tcttcgtttc tctccaaatc ctaaaattgt agtataatga ttataccata aatgtactga
    23281 aaggaagcct atgccagcca atctcgccct tcgtatgcgg cccaaatcca ttgatgaagt
    23341 gatcggtcag gagcacctgg tcggtcctgg aaagattatc cgccgcatga ttgatgccaa
    23401 tatgctgtcg tccatgattc tctacggtcc gccagggatt ggcaagacct cgatcgcctc
    23461 tgccattgct ggcacgacca agtatgcctt tcggaccttt aatgccacga ccgacaacca
    23521 aaaacgcctg caggaaatcg ctgaagaagc taaattttct ggtggtctgg ttctcctgct
    23581 cgatgagatt catcgcctca acaagactaa acaggacttc ctgcttcctc ttttggaaaa
    23641 tggcaatatc atcatgattg gggcaacaac agaaaatcca tttttctcta ttttgcctgc
    23701 cattcgcagt cgggtgcaga tttttgaatt acaacccttg aaaaccaccc atatccgaca
    23761 ggccttagaa ttggctctga cagacagcga acgcggtttt gacttcccta ttaccattga
    23821 gcctgaggct ctggactttc tgtcaaatgc gacaaacggt gaccttcgtg ccgcctataa
    23881 ttcactagaa ctggctgtac tttctaccaa ggaaagcgag ggcggacgcc atatcgactt
    23941 ggacgctgtg gaaaatagcc tacagaaatc ctacatcagc atggacaaga acggcgatgc
    24001 ccactacgac atcctctccg ctctgcaaaa atccattcgg ggtagcgatg tcaatgccag
    24061 cctccactac gccgctcgtt tgattgaggc agaagacctg cctagtctgg cccgtcgctt
    24121 gacggtcatt gcctacgaag acatcggctt ggccaatcca gaggctcaga ttcatacagt
    24181 gactgcactt gaagctgccc agaaaatcgg ctttccagaa gcacggattt tgattgccaa
    24241 tgtagtcatt gatttggccc tttctcccaa gtccaattct gcctatctgg ctatggatgc
    24301 agctctggct gatttgcgga aaaacggtca tctgcctatt ccaaatcatc ttcgggacgg
    24361 tcattatact ggtagtaagg agctgggaaa tgccattggc taccagtatc cgcatgccta
    24421 tcctgaaaaa tgggtggacc aacaatacct gcctgataag ttacttcaag cggactactt
    24481 cactgccaac gacactggaa aatatgagcg tgccttgggc atgacacaag aaaagataaa
    24541 aaatttgaaa aaaaataggc gccaaaatcc ttgatagaac tggttttttg gcacatacat
    24601 tttgacaccg cttacatttt tgccattttt ctcttgattt ttcaaaaaaa agtggtatta
    24661 ttaaatcata aataagaact gctgtggtat acgaattcat acctatgtgt tgaccgacta
    24721 tttttgtatt actagggaga caaagatcct ctgacagtat gcaagctggc acacccagaa
    24781 gcaactaagt tagaaacgcg tcacccacct gcttttagcg tgcgggatca atacaatcca
    24841 tggataaccg gtaccaatac agcattttta ttttttacct tccttagctc agctggcaga
    24901 gcagcggact cttaatccgt gggtcgtagg ttcgatccct acagggagga ttggttgata
    24961 tgaggaaagt cttgatttat caaggctttt tctcgttttt agagagaatt tgttctacat
    25021 ttggtcaaaa agaacccttt cacattgtga agggctattt ttttaactta tcccacagga
    25081 caactcgttt ttcctgcaat gatttctgta catcgatgat gcgttgattc gatgagcctc
    25141 gaaattgcag cataagattg cgcttggtac ggtcataacg gccgtcaact agaatatcta
    25201 aataggatag taactctaac ttatccggag tttctaacat catttcttcc catgtgtagc
    25261 ctgtccaaga ccaaatgtcc ttttctggca attctttccg aattcgcttt acgagtggga
    25321 ggaccgtgcc cgtgttcaga aaaggctcgc cacccaagag ggttaggccc tgtacatagg
    25381 gctgggccaa gtctgctaaa atgcggtctt caagctcctt ggtataggga atccctgctt
    25441 taaaagacca ggttgcaaca ttgtagcagc cctcgcagtg aaacagacag ccactaacat
    25501 atagagagca acgtactcct tctccatcca caaagttaaa ggctttgtag tccattattc
    25561 gcccttggct aagttcctcg ctcttccatt cttgtggttt aggattattc atttcaaata
    25621 cctgagcata agcaaataaa atctgatcgt ttggatgaat tccgttttac cagtacacag
    25681 actgttttta tccataaatg gtaattccaa tgctttagct cggattgatc ccagcaagct
    25741 tagtgcggaa ccaatctcaa ttcctttcct gttttgattc agtagtttgt cactcccatt
    25801 aatcctcaat ccagtatctt tctactccgt ctcgaacgtc ttccaaaacg ccaccacaag
    25861 ccacaatcgt gcgacggctg gcctgattgt ctgtcaagca agtcacaagg accttggaaa
    25921 tatttttggt tgcggcctcc tgcaaaccaa gtcgtagctg gtccttggca tagcccttgc
    25981 cacgctccgt cgggcgaatg gaataaccaa tgtgcccgcc tttattgagc aggaaatcat
    26041 tgagccgtag gcgtagactg agaaaaccaa gggctcgacc agtctggtca aatgacacat
    26101 attgaatgga aggaacaaaa ccgtctggca gattgagacc tacctcataa tctttgtttc
    26161 tcaaaatcca ttcttcaaag tcgacatctt tagagataaa gcctccgtcc atagctgagc
    26221 ctgctttttc aaattctgcc agcatctcca aaatcgtttc cttatccgct atagtcggtc
    26281 ttcttaattc cattttagtc tccatattgt ctcttgaaaa attcactgat gatgtctata
    26341 tccagtccca agtcctgcac aatttctgcc ttgtggaaat catcatagtt gtccttaccg
    26401 ctccaaacaa aagaattggt cacaatctga tagtccttat ctgactcgac tgctctgcca
    26461 ttgaccacaa aaccctcacc gctttggaca atgccccaca tctgagggtg gaggcctgtc
    26521 tggagactgg agagcaagtc tctgcccttg atacgaacta atagtactcg cttggaaaag
    26581 ggcaggacct tgaccaagtc cgaataaaag attggtcccg ccaacaagga agcccgaata
    26641 ccgaagccgt tgatgaccgc tccatccgcc tgcaaaccta gttgactcgc ctgttcaaat
    26701 aaagcctgac aaataacagg ggccagagtt gataaccttt gacgaatgct gtctcgctct
    26761 ccgtctagtg cctgaggtaa aatcgctatc ggtttggaaa aagctgcgtc acgttccgat
    26821 ttcatctggt cgataatagc cttgaccgcc ctgtcttctt gggtcaattt ctccacctca
    26881 atcaagtcat aagccaggac ctcgtgccgt ccatctgcaa aacaccgcag ggatagatga
    26941 ccgacaaagc gaccatactg accagcttgg cagatactaa ctccaccaat ctgactaggt
    27001 tgttttagaa tggtatgggt atgtccaccc aaaatcacgt taagctcagg gaaatccttg
    27061 gccaaatgca catcctcatc gtatcctaga tgactaagca agaccagatg agccgatgga
    27121 ttctgactca caatctgatc caccactctt cgtagagctt gtctatggtc ttcaaaaatc
    27181 acattctccg acggcgaagc aacctcctgg gtttccaagg tagtcaaacc gaggacatag
    27241 aggctttttc cattcatatc aaattcaagg acatcctcaa gcggtaccaa ctcatctgcc
    27301 gcctccacat cctgatagct gagattggag gatacaattg gaaactgagc atagtcatcc
    27361 aagcgactaa gcaactcatc tccgtggtca aactcatgat tgcccaaggt catagcctga
    27421 caaccaattt gattcattag ctcgatttcc ttgactcctc ggtacatatt gaagaaaata
    27481 tttcctgaaa acaaatcccc actatcaaaa acaaaggtcg gaatcccttt tttctcatta
    27541 ccatcccgaa tgttcgcaat cagttgcgcc ttctttggaa aattctccat gtaggaatgc
    27601 atatcattgg tatggagaat actaatatct gtatagtcca tactattttt tcttgttttt
    27661 tgcttgtttg agcaattcct gcacacgcgc ttttttatcc tgcttcacat tagaattctt
    27721 ctcatgatag cgtgtcacca gggccttccc cttatcgtct aattgatatt ttcccattgt
    27781 tttctcctct tttttttatc tcttatttgt ttataataaa cttccacagc taactggaac
    27841 tgtggaagct ctacatagtc tgtttattac ttataagctt gacccattca tatgtttcac
    27901 acgcgccgaa atttccttgt gacggccttt taccatcgga cgggcctgtg gattgcctag
    27961 ataaccacaa gttcgtttaa caacatccac cgacttagga tcgctattcc cgcaatttgg
    28021 acacttgaag ccacgctccg tcggctcaaa atcaccttca aaatcgcaag cgtaacaatg
    28081 gtcaatcgga gtattggttc ccaagtaacc aacacggtca taagcatagt cccaaacagc
    28141 ttccaaggcc tttggatttt gttgcagcac agggtattca cagtaatgga taaatccacc
    28201 actggcacct acagcaggat aaattttctc aaagtccagt ttttcaaacg gtgttggatt
    28261 tttgcgtaca tcataatgga aactgttagt gtaatattct ttatccgtaa tgtccttaac
    28321 gatgccaaat ttctctgtat ccatacggca gaagcggtct gtcaggcttt cagatggtgt
    28381 cgaataaact gagaaatgat aaccatattc atccgaccaa tcttcaacca aggctttcat
    28441 tttcttgata atacccaccg tgaaatcttt tgcctctggg ttggtctccc attcgccacc
    28501 gtaaaatact gttgcgactt catacaaacc aatgtacccc aaagatacgg ttgctcgacg
    28561 atttttaaag acttcatcta ctgcgtctgt cttagccaag cgtttgccga atgccccata
    28621 ctgatacaaa attggtgcat tggcaggggt cgcctctttc actcgttcca cacgatagac
    28681 cagagcatcc ttggcaatgg ccatgcgttc tgcaaatatc tcccaaaact tatccatatc
    28741 tccagcagac tccatggcaa tccgtggcaa attgacggtt acgacaccca agttcatccg
    28801 accagatgtc acatcctgcc cattttcatc cttccaacct tgaaggaaag agcggcaacc
    28861 cattggcacc ttgaaggaac ctgtcaactc aacaatcttg tcataagaaa gcatatctgg
    28921 atacatacgc ttggttgcac attcaatcgc caattgcttg atgtcatagt ttggagaatc
    28981 tggctccaag ttcaagccac gcttaactgt gaaaatcaac ttaggaaaga tagctgtccg
    29041 accttcgcgc cccaaacctt tgatacgaat gttcaaaatc gctttttgaa tttctctctc
    29101 aaaccacgat gtccctaggc caaaaccgag tgaggtaaag ggtgtttgtc cattggaagt
    29161 aaaaagggta ttgatttcat actccaaaga ctgcatagcg tcatagatgt ctttttgcgt
    29221 tttagcacgc gcatattctt cttgcttgtc tgctaacacc caatccttgg catcattcaa
    29281 atgcttttgg taattgagtt ccgcataggg cgccaaaact tcatcgatac ggtcagctga
    29341 gcaaccacca tattgactag aagccacatt agcaatgatt tgtgaaatct gagccgtagc
    29401 tgtttggata gacttcggac tttctacatc cgcatttcct atcttgaagc cttgcgccaa
    29461 cattcctttg aaatcaatca aacaacagtt agtcattggt gtatatgggc tgtaatccaa
    29521 gtcgtggtag tggatgtcgc ctttttgatg ggcgttggcc acatgagctg gcaataattt
    29581 gagaccgatt gacttaccga caattcctgc tgtcaggtca cgttgggtat tgaacacatc
    29641 cgcgtcttta ttagcatttt cattgaccac agactggtcc ttgctcaaca gcttatgaat
    29701 ctcaaaatta atatcggtag cctgatgacg gcgaaaatca cggcgtgttc ggtattgaat
    29761 ataaagctcc gccaaatcat acaaatgagc ctttaacaat tcctgttcaa cgaccgtttg
    29821 aatttcgtaa atttgaacat ctttctcaaa tcggcgacca atttcagcca aaacagcttc
    29881 taatacaatt tttaaacctg cctctgaaac aggatgttct aattcttggt ttgcccgccg
    29941 aagagcagaa aaaatcttat cctggtcaaa ggatactgtc cgtccatcac gttttaaaac
    30001 caataattct atactcggta agacattttc ttgcacattc atctgacaaa cctccaaaat
    30061 tcttcacttc tattagtgta gcacttcaca aaacaaaaat caatatcttg tgtaaaaaaa
    30121 tattaaacaa cccatccatg cactatatat aggtcttaaa aattctatca attggaaaac
    30181 aactgtgccc aatttcacca tttgacaagg atgaattact agattgaaac aggaaaacag
    30241 attgggcaaa ggtctaactt ctctatcaga aaacctaaaa aacagccctc taacagggct
    30301 ggctctatgt attgaaaata ggctagggcg ggtcaccaca tgcctattta aaattgagga
    30361 tttgaataag aggcgaaaaa ttctctagtt cgttcttctt taggatgatg gaaaagctcc
    30421 tcaggtgtcc cctgctccag gatacggccg ttttctagaa ataatacctt atccgccact
    30481 tggtaaatga aattcatgtc atgactaact aaaatcatcg tttgtcctgt cttagccgca
    30541 tcggcaatgg aacgttctac ttctccaacc aactctggat caagcgccga agtcggctca
    30601 tctagtagca aaatatctgg ttgcatggca agagcacgtg caagagccac acgttgcttt
    30661 tgaccacctg acagatgtct tggataatgg ttctcacgtt ctgacagccc gacctttctc
    30721 aattcttctt tggcaagggc ggttgcagag gcatcatcca tccgcttgac aattttaagc
    30781 ccttccttga cgttatcaag agctgtcttt cgttcaaaca gattaaactg ctgaaagacc
    30841 atagccagtt tgcggcgtaa ggtcaatatc tcctcttttg aaatattggt aaaatcaact
    30901 gtaaaaccat caatttcgat actccccgca tctgcctgct ccagatagtt cagactacgc
    30961 aaaatggttg attttcctgc tccagatggt ccaacaaggg caataacctg ccctttttca
    31021 atgtccatat cgattccatc tagtactttt tgtcctgaaa attccttgac taaattgcga
    31081 attttaatca ttagcgatca cctccaactc cagaaatatc tactgattcg ggggcctgaa
    31141 tagccatttt attttcaagg aaacggccga aagactcaat cagaacagag agcgcccagt
    31201 agaccaaaga gacagaaatg taccgctcaa agtagcgata gtctgcccca ccttgaatct
    31261 gtgcctgtgc atagacctca acgatacccg cactgaaggc tagggaagtt cctttagtca
    31321 gaccaatcaa ggtgttaatc aacgacggag ttgcaatcac agccgcatta ggaatgatga
    31381 tccgacgata aacctggcca gaagtcatac ctaaggaacg agctgcctca atctcccctg
    31441 gactaacagc ctgaatcgca gcacgaatag actcactcat ataggctgcc tcattaaatg
    31501 caaaggctgt aatcgcaaag acagctgcag gaatagcatt gatattccaa tcaagaccat
    31561 attcctgatt gagccctctg agaaccaatg gaattccata gtaggtcaac atcaactgca
    31621 ccaagatagg agtgcctcgc aaaaaactaa caaaaactgc ctgaacggga tataagaatc
    31681 gtacacgatt aatctttaca atcgcaaaaa ccaagcccaa tatcaaacca aaaaaagcac
    31741 cagcgagcgt caagccaatc gtaatcggta aacgttcaat aatggagggt agggcatcaa
    31801 aaacagccct aatactaaat agcttaccat ccggtaacca ctctaaaaaa acttgatacc
    31861 atgccggtcc tgttattcct aatacaccaa tcatactctt ctccaaacat ttaaaaatga
    31921 cagattttct gctgtatact ctattttatc atgtaaccat ccacatcaac cttatatata
    31981 ttttatggct gtgataagta atcttaatga ttataaaaaa gacaatgaaa aagaaacagc
    32041 ccacttggac tgctccctcc tgtcacaata ctatcgactc ctattcatta ggaacagcta
    32101 gttcctccgc cgttggagca tagtcttttc cgaagaattg ctctgtcaat ttcgcaatgg
    32161 tcccatcttc gttcaaagcc ttgatacggt cgttgacaaa gctttgtaga gccgtattgt
    32221 ccgaagaaaa tacatagtaa ataaacggtt tttctgctgc ttcaagctcg actgttttaa
    32281 gatttgtcaa attttgatct gcaataatag cattaaccgt aggggcatca aaaattttaa
    32341 aatcatactt gccatcattt atattggtca aaatctgtgt aatattttca ccagtatagt
    32401 tgatgtcgac tggtttatcc gtatgctgag tattgtattc ctctagctga gcagctgttg
    32461 ttgtccctgt aactacctgt gtagaatgac caccaatatc atcataagac tgaatatccg
    32521 tatcttttgg cacagctaaa acagacggtg tagaggccgt tggataagaa tagaggtatt
    32581 tttcaccacg ctcttttgta taggaagtat tattccctaa caaatcaaag cgtcctgaat
    32641 ccaagccagg gaattgaccg ctaccatctg ttgtttcaaa ggtcaattca tactggtcag
    32701 aaccatcaaa gatagctcga gccaattcaa tatcaaaccc tgtcaactct ccattctcat
    32761 ctcgataaga aaaaggtttg gtagtcccaa cagttcccat tacgatggtt tcttttttat
    32821 ccgcttctga agaactagtg tttgatgagt ttgaggtaga cgagcaagct gccaaagcaa
    32881 ctgtcgcaag ggctgtgata ccagccagtg atagaatagt tcttaatttc atagtatttc
    32941 tccttttgta taagcaagtc agacctacaa ggtctgcaca aaataatcaa ataacttctg
    33001 attaccgcca ctttgatcaa tcagaagttc cggatgccac tggacaccca gaaaacgtgt
    33061 ctcatccatt gatcggacag cctcaataat accgtcatct acagaatgcg caatcgcttc
    33121 tagcccctga cccagattct ctatcgcctg gctgtgaata gaattgacag ctactctctg
    33181 accaaaaata ctagccagag gcgttgcctc tttacattct acctggtgaa tcagatcaaa
    33241 aggcaaggac cgatgcccct ctaccgcttg tttgagagtt cctccacgtg caacattgaa
    33301 aagctgcatc cccctgcaaa tccccaaaat cggtttttcc tgtctcaagg cttcgtagac
    33361 caatttcagt tcaaattcgt cacgttcctt gaaatagtca tcgctttcga tgagtttttc
    33421 ttgaccgtaa aactgaggta atacatgttg accacccgtc agtaataact tatcaatcgc
    33481 cgacacatag tcgacaacat ccgtttcacc agacaagggg atataaaaag gaaggccccc
    33541 cgctcgcttg attccatctg caaagttacg agacaccgat aaattcataa tcggaatccc
    33601 ctctgcgaca ggcttttcat tactggtgat gccaataatc ggtttcccca tcctgccctc
    33661 ctttcgtaat g
//
LOCUS       DBNFCX010000015        33307 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.015, whole genome shotgun sequence.
ACCESSION   DBNFCX010000015 DBNFCX010000000
VERSION     DBNFCX010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 33307)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33307)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33307
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.015"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(397..924)
                     /locus_tag="AC1PJC_000583"
     CDS             complement(397..924)
                     /locus_tag="AC1PJC_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA];
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HIP6619606.1"
                     /translation="MRKFFQADGNLTKLGRQICKTLAGAYALAIVLLCFLPQTWYPQY
                     KDFSTPGIIQIGRLYLLPTPFNSIVNGDKVDSLADLGWIFLQNITNIFLLFPLIFLLL
                     FLREEWRSLRAVIRYSFCISLFIECTQLLLDLLIDAQRVFEIDDLWTNTMGGILAYFT
                     YSLIKRGIILSKQES"
     gene            complement(921..2033)
                     /gene="rlmN"
                     /locus_tag="AC1PJC_000584"
     CDS             complement(921..2033)
                     /gene="rlmN"
                     /locus_tag="AC1PJC_000584"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0030488 - tRNA methylation [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HIP6619607.1"
                     /translation="MKPSIYAFSQANLVDWILENGEKKFRATQIWEWLYRSRVQSFAE
                     MTNLPKSLIEKLEEHFVVNPLKQRIVQESKDGTIKYLFELPDGMLIETVLMHQHYGLS
                     VCVTTQVGCNIGCTFCASGLIPKQRDLTSGEIVAQIMLVQKYLDERNQNERVSHIVVM
                     GIGEPLDNYDNVMTFLRVVNDDKGLAIGARHITVSTSGLAPKIREFAREGVQVNLAVS
                     LHAPNNDLRSSIMRINRKFPIEVLFEAIEDYIKVTNRRVTFEYIMLNEVNDGVEQAQE
                     LADLTKNIRKLSYINLIPYNPVSEHDQYSRSTKERTLAFFDVLKKNGVNCVVRQEHGT
                     DIDAACGQLRSNTLKKDREKARARIAAAKAKAGIRA"
     gene            complement(2042..2683)
                     /locus_tag="AC1PJC_000585"
     CDS             complement(2042..2683)
                     /locus_tag="AC1PJC_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YutD family protein"
                     /protein_id="HIP6619608.1"
                     /translation="MKKEISPEMYNYNKYPGPSFARVGDKVVSENIELDLLEDYKNAF
                     DQTIFGQRFSQLMLKFDYIVGDWGNEQLRLRGFYTDDKNVKSDLKISRLDDYLTEYCN
                     FGCAYFVLANPNPQDLPAEEEDRPRRKRSRSRNRNRNQQRTEPIAPKENKSNRNDRQK
                     KGKQQNKQSEQRHFTMKNAGVKASQTERSQKRERKQSKREMNEVKRNFVIRQK"
     gene            complement(2871..3920)
                     /locus_tag="AC1PJC_000586"
     CDS             complement(2871..3920)
                     /locus_tag="AC1PJC_000586"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SepM family pheromone-processing serine
                     protease"
                     /protein_id="HIP6619609.1"
                     /translation="MKKNRKLTLIASIVLGTLLIWFAVFVRLPYYLESPGGAADIRQV
                     LTVNNQIDQEDGSYNFTYVSVQQATALQLFAAQFDPYTTVRSSEEMTGGADNEEYFRI
                     AQFYMETSQNMAKYQGLTLAGKEVNLDFFGVYVLALADDSTFKKVLNIADTVVSINGK
                     TFESSPDLIKYVSGLELGSDVTVGYISAGQEKSADGKIIKLSNGKNGIGITLVDHTEV
                     QSSIPIDFQTGDIGGPSAGLMFTLAIYTQLAEPDLRDGRIIAGTGTIEQDGKVGDIGG
                     ADKKVISAAKSGASIFFVPNNPVDVEVLKEDPKAKTNYEEAKEAAEKAGLDIEVVPVK
                     TVQEAIDYLKKTKGE"
     gene            complement(3907..4395)
                     /gene="coaD"
                     /locus_tag="AC1PJC_000587"
     CDS             complement(3907..4395)
                     /gene="coaD"
                     /locus_tag="AC1PJC_000587"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HIP6619610.1"
                     /translation="MSDKIGLFTGSFDPITNGHLDLIERASGLFDKLYVGVFTNPKKA
                     GLLTGLERKAILEKLFVGMENIEVVLSENELVVDVAKRYGVTHLVRGLRNATDLEYES
                     SFDFYNRQLAPDLETIYLIAKPELKFVSSSQVRELLYFKQDIGPYVPEIVSEEIRKNE
                     EK"
     gene            complement(4385..4924)
                     /gene="rsmD"
                     /locus_tag="AC1PJC_000588"
     CDS             complement(4385..4924)
                     /gene="rsmD"
                     /locus_tag="AC1PJC_000588"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052913 - 16S rRNA
                     (guanine(966)-N(2))-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HIP6619611.1"
                     /translation="MRIVSGSYGGRPLKTLDGKTTRPTSDKVRGAMFNMIGPYFEGGR
                     VLDLYAGSGGLSIEAISRGMESAVLVERDRRAQAIIRENIAMTKEADKFQLLAMEARQ
                     ALNSVEGPFDLVFLDPPYAEQEIEDVITELCRRDLLADDVMVVCETDKAVSLPEEIAE
                     LGIWKEKLYGISKVTVYVR"
     gene            complement(5224..5946)
                     /locus_tag="AC1PJC_000589"
     CDS             complement(5224..5946)
                     /locus_tag="AC1PJC_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HIP6619612.1"
                     /translation="MEKKFEKLSLAEIGIISFMGLILLISLGASWYKNAQSETSDTKT
                     VQQVPNQKKTVDTLFQDAENAVIVLEGTNTEEKLAEAQSAVNKVTDATKKAALQKRID
                     QVKELVGQQTDAQTQAKLKAELVRAEAAQKVADEKKVSETGTSQSTDLAEASETSQES
                     YVVPNQNIYGNQSVRSTSQHTSSVASTSTSVSVPPTSEGAPVVETPTVSETPAETTDS
                     TTSLVESVETVPTADESSPDNP"
     gene            complement(6003..6389)
                     /locus_tag="AC1PJC_000590"
     CDS             complement(6003..6389)
                     /locus_tag="AC1PJC_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HIP6619613.1"
                     /translation="METFWVFLVFLAVLGAWMGFNYWRLRRAATVIDNAEFAEKIHGG
                     QLIDLRDPSEFNRKHILGARNIPYQQLRQSTAALRKDRPVLIYENDRGQLVTPAALHL
                     KKQGFNKIYILSYGLNGWNGKVKTTK"
     gene            complement(6389..6607)
                     /locus_tag="AC1PJC_000591"
     CDS             complement(6389..6607)
                     /locus_tag="AC1PJC_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003043479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgQ family protein"
                     /protein_id="HIP6619614.1"
                     /translation="MKRLYDVQQLLKRFGIIVYMGNRLYDIEMMQIELNRIYQAGVLD
                     RLEYMEAELVLRREHRLELEYQKSRENE"
     gene            complement(6931..7530)
                     /locus_tag="AC1PJC_000592"
     CDS             complement(6931..7530)
                     /locus_tag="AC1PJC_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016398984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HIP6619615.1"
                     /translation="MRILVAEDQAMLRDALCQLLGFQDGVEAVLQAENGSQAIALLEK
                     EPVDVVLLDIEMPEKTGLDVLEWVRGQALPVKVVIMTTFKRPGYFERAVKADVDAYVL
                     KERSIADLMRTIETVLAGRKEYSPELMDILLTQRSPLTNLERQLLKLVAEGLSNKEIA
                     CQLHLSDGTVRNYMTSILSKLGAENRTAAVKVAQEKGWL"
     gene            complement(7527..8621)
                     /locus_tag="AC1PJC_000593"
     CDS             complement(7527..8621)
                     /locus_tag="AC1PJC_000593"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HIP6619616.1"
                     /translation="MIFEKRKVPLMFFVGMIFLYFPLYYAQYTPNPTAVVLATILFAL
                     VYCSLFYTDHKLYSMLAWFYLIGYIAVMSFWGNLQFSLFIFNLSNMLGWYYKENRPTY
                     RTVSYGLLLLAIILWALFGPVPFEMRAFALVIHFFGLALLIFSWIETKRAALQQRLQE
                     QNASINLLLAENERNRIGQDLHDTLGHVFAMLSVKAELVQTLLDHDQIDQAKKEVADL
                     QTLAKDSMQEVRQIVQSLKQHTVAEELQILQQMLDLAGVDLVVLGGEIAEQLSLPVQN
                     KLAMVLRELANNLLKHSRASKCRLLFEKDQQELVLHYEDNGVGFAQLTGQELHTIKDR
                     LVTVKGSLEFISLAKPTRLSIRIPFEEVVE"
     gene            complement(8630..9361)
                     /locus_tag="AC1PJC_000594"
     CDS             complement(8630..9361)
                     /locus_tag="AC1PJC_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIP6619617.1"
                     /translation="MKALVQVEAVKLSRSLGVFLLSIGMPVIFFLIFSSTVQFDDTAT
                     QKAFIQSYMLTMTGFSMSGFALFTFPMMLAEDRNNSWLTFIQHSPLPIWQYYLSKLVR
                     VLLCFVSSIAVVFAVGGLVKGVEMTAQEWVISALLLLVTSIVFLAIGLLLVQIQSEQT
                     MSVVANLLYFVLAIMGGSWMPVSLFPDWVQRICKLMPSYHVNQLVTTYTQEGDFLWKS
                     LLIVLGYAIIFLGIALVMNRKTEQQ"
     gene            complement(9358..10236)
                     /locus_tag="AC1PJC_000595"
     CDS             complement(9358..10236)
                     /locus_tag="AC1PJC_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6619618.1"
                     /translation="MIQVNQLEKIIKGRTILSDISFEIKSGECVALIGPNGAGKTTLM
                     SCLLGDRKATKGQVLLDGLAPQARSNKETVAVLPQENAIPTDLKVKELLRFFQAIYKD
                     SLTDAEIDSLLRFSPEQKNQLAGKLSGGQKRLLAFVICLIGKPKLLFLDEPTAGMDTS
                     TRQRFWEIVHDLKEKGVTIFYTSHYIEEVEHTAERILVLHQGRLLRDTTPFAMRSEEQ
                     EKEVALPIRFATVVEGLDAIDNISYKQDTVSFKTRAIEQVWANLQEAGCRISDLEVQN
                     KTLLNSLFDKTREEES"
     gene            complement(10233..10415)
                     /locus_tag="AC1PJC_000596"
     CDS             complement(10233..10415)
                     /locus_tag="AC1PJC_000596"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619619.1"
                     /translation="MKSFVQTGISYFTIAFVFLYASCILFGQGLQVMTYLAWSLPASI
                     IIGIVGAVICQKGEQG"
     gene            complement(10719..11237)
                     /locus_tag="AC1PJC_000597"
     CDS             complement(10719..11237)
                     /locus_tag="AC1PJC_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Dps family protein"
                     /protein_id="HIP6619620.1"
                     /translation="MMKQKYYQSPAEIASFSPRPSLADSKAVLNQAVADLSVAHSILH
                     QVHWYMRGRGFMIWHPKMDEYMEEIDGYLDEMSERLITLGGAPFSTLKEFSENSQLKE
                     VPGDYTVTIEEQLARVVEVFRYLAALFQKGFDVSDEEGDSVTNDIFNVAKASIEKHIW
                     MLQAELGQAPKL"
     gene            11435..11647
                     /locus_tag="AC1PJC_000598"
     CDS             11435..11647
                     /locus_tag="AC1PJC_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HIP6619621.1"
                     /translation="MSEEKFDAKLEQLSGSAKEVIGKLTGDKEIEVEGLVEKGIGKAK
                     ELVEDAKDGLEGAINGIKNAFDKEEK"
     gene            11817..12251
                     /locus_tag="AC1PJC_000599"
     CDS             11817..12251
                     /locus_tag="AC1PJC_000599"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase"
                     /protein_id="HIP6619622.1"
                     /translation="MKKIVFVCLGNICRSPMAEFVMKDTTSQFHIESRATSNWEHGNP
                     IYPGTQKIFQKHKIPYDQDKSSQQMSQTDFEAFDIIIGMDSNNVRDLQKMAPAHAQNK
                     IFQFAEKSVPDPWYTGDFDETYEMVKKGCQDWLDRLQSFDQE"
     gene            12383..12805
                     /locus_tag="AC1PJC_000600"
     CDS             12383..12805
                     /locus_tag="AC1PJC_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619623.1"
                     /translation="MKEFKLPSIKWHDITSHFTRPKLEILSLIIILICTLSVFTGRIA
                     SKQAMTFNNGALQYNGYVVANKMNGQGKLTFDNGDVYEGQFKNGIFHGQGTYTSASGW
                     VYTGQFKNGYADGKGKLTTEGQATYEGTFKQGIYQYEN"
     gene            12795..14594
                     /locus_tag="AC1PJC_000601"
     CDS             12795..14594
                     /locus_tag="AC1PJC_000601"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HIP6619624.1"
                     /translation="MKIKWLSVIRVIGLVFVLLYHFFIKYFPGGFVGVDLFFTLSGYL
                     TTALLIDEFAKHKKIDIVSFFRRRFYRILPPLVLTILLVLPLALLVRNDFIANIGNQI
                     AAALGFMTNFFEILSGGSYENQFSPHLFVHTWTLAIEVQYYLVWAGLVWYLTRISKSV
                     GQLRGSIFLTSISLFSLSFLAMSISSFFVDNFSTIYYSSFTHTFPFFLGSILATIAGI
                     GNTTTAFQQQVNTLTIKQAIGLFLGGLGIELLLLFTLQFSSIWTYLIGFLLSNLATAT
                     MIFAARVLHEKTEDVKEPAIILFFASISYGIYLFHWPLLIIFTQLTNATIAAGLSFVF
                     STILSTISFYILEPYIAGKVGSLFGLAIDLKPYKKWLLSSFACLTIVGLGICLFAPKL
                     GSFEQESMVSNLYQAQTQLNTTRSAAENAKATSFEIQKGVIIFGDSVTVRASSAIQTA
                     LPDAQIDGTVSRNLSEIAKLINLYKQNNSLKETVVVALGTNTTDNYQELLDQLVKDFP
                     KGRRLIFVTPYDGNFTPSESISYQTGQYEKELAEKYDYISIADWYQVAKDNPPIWYNT
                     DLVHFNLESNGGEVFAQTIKNAVEAVADGPIKN"
     gene            complement(14820..15473)
                     /locus_tag="AC1PJC_000602"
     CDS             complement(14820..15473)
                     /locus_tag="AC1PJC_000602"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA];
                     GO_process: GO:1901137 - carbohydrate derivative
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HIP6619625.1"
                     /translation="MKNKQIHLRNASFFALAFVILGYVVKFYPSTLAGFDSTIQSAIR
                     GNLPSGASQFWTSITVLGNTVIILAITMILAAIFYYYKKWKIEAYFLLASFAAMGVAS
                     TALKYVYQRPRPSIEWLIDTIGYSFPSWHTASTMMIAGAVVIIVHQRMKKGIARLVLQ
                     AMLILLAVLVAVSRIYIGVHYPTDIIGGWLLAVTLLQMMYPFYDQKRFEWRFQSKQK"
     gene            complement(15498..16055)
                     /locus_tag="AC1PJC_000603"
     CDS             complement(15498..16055)
                     /locus_tag="AC1PJC_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HIP6619626.1"
                     /translation="MTNTRKMTIIAILSAVSFLLMYLKFPLIPTASFLEVDFSLVPIL
                     FGLLVLDMKSSFAILLVRTFLKLILNNQGPSTIIGLPMNIAAMSVFILAVAYFWKNEQ
                     TLKNYLKAATIATLGSTAVMLVLNYVYAVPVYAAFANFDIKEILGLTNYLLMMVLPFN
                     LLQGIVLSAIFYICYKAAQPILKKV"
     regulatory      complement(16115..16329)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:15.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            complement(16379..16924)
                     /locus_tag="AC1PJC_000604"
     CDS             complement(16379..16924)
                     /locus_tag="AC1PJC_000604"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001019793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0141098 - tRNA
                     (cytidine(34)-2'-O)-methyltransferase activity [Evidence
                     IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HIP6619627.1"
                     /translation="MNIETLEYIEETAKNHIVLFEPQIPQNTGNIARTCAATNSPLHI
                     IKPMGFPIDDRKMKRAGLDYWDKLDVRFYDNLAEFMDYASKQGRVHLVSKFADKTYSD
                     EDYNDGNIHYFLFGREDKGLPEDFMREHPEKAIRIPMNDEHVRSLNVSNTACMIVYEA
                     LRQQQFAGLDLVHTYDGDKLK"
     gene            complement(17312..19087)
                     /locus_tag="AC1PJC_000605"
     CDS             complement(17312..19087)
                     /locus_tag="AC1PJC_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HIP6619628.1"
                     /translation="MKRMKNIALTGIGLLSIATLTACQTKEKTSDVALTFKSEVTHEG
                     QTIEGGSLKYALVASAPSTGILIDELSQTAVDSTFADMVDISMFGYDSARKLDDSGLA
                     KAEFDVEAKTVTVSLTGKDYKWSDGQAFTIDDYIFTIEQLASPDYTGVRADTTYTNII
                     GFEEFQAGTASEISGVKKVDDYTVVLSVKDMSPSMMYAGGGVPYLVMPKHIFKDIAVK
                     DWESSEYSRTAKVVGMGPYKVKEIVNGESVTYVPNEYYFKGKVKLDSYRIDIVSPDTI
                     VAEMRAGNYDIADMPTDQYESYKDLSNITLLGSLDGIYNYIGFNLGKYDETSGKNVTN
                     PNAKMNNVKLRQAMGYALDNAVIGEKLYNGLYHPTNSLIISFFGDVHDSELAGYSYDP
                     EKAKKLLDEAGYKDVDGDGMREDAAGKPLTISVAAQKSTETQETMVQQYLTWWKEIGL
                     NVELYTGRTIEYNTFYESIAANDEGIDVYLAAWIAGLDPDPTSLWGPEAMYNYTRFVS
                     DENTALLNKITSAESFDEQKNIENYKAWQEYAFEQAFAIPTFERESITAVNKRVKYYD
                     VYIGSDSKSGHENLELTAEKGIAAE"
     gene            complement(19507..19746)
                     /gene="yidD"
                     /locus_tag="AC1PJC_000606"
     CDS             complement(19507..19746)
                     /gene="yidD"
                     /locus_tag="AC1PJC_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HIP6619629.1"
                     /translation="MTRLLIGLVRFYQKFISPLFPPSCRYRPTCSAYMIEALQKYGLK
                     GFLMGLARIGRCHPFVEGGEDPVPDRFSLKRNKQK"
     gene            complement(19746..20477)
                     /locus_tag="AC1PJC_000607"
     CDS             complement(19746..20477)
                     /locus_tag="AC1PJC_000607"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_function: GO:0140098 - catalytic activity, acting on
                     RNA [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HIP6619630.1"
                     /translation="MRINKYIAHAGVASRRKAEELIKQGLVTVNGQVVRELGTVIKSG
                     DKVEVEGQPIYNEEKVYYLLNKPRGVISSVSDDKGRKTVVDLLPTVKERIYPVGRLDW
                     DTSGVLILTNDGDFTDEMIHPRNEIDKVYLARVKGVANKEVLRPLTRGVVIDGKKTKP
                     AVYEIIKVDPVKNRSVVELTIHEGRNHQVKKMFETVGLQVDKLSRTRFGNLDLTGLRP
                     GEYRKLNKKDISKLHTLAVTKPVKK"
     gene            complement(20467..21036)
                     /gene="scpB"
                     /locus_tag="AC1PJC_000608"
     CDS             complement(20467..21036)
                     /gene="scpB"
                     /locus_tag="AC1PJC_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HIP6619631.1"
                     /translation="MNRLAEIEVLLFVAGEDGLTLRNLAEMLEMQPTAVSQQLEKLSE
                     KYMADKASGLAILESSNRYKLVTKKEYANLLRIYAKTPINQTMSRALLETLSIVAYKQ
                     PITRIEVDDIRGVNSSGAISKLQAFDLIRENGKKEVLGRPNLYVTTDYFLDYMGINSL
                     EELPDVSEIDLIQEETELFVERNELENEN"
     gene            complement(21020..21739)
                     /locus_tag="AC1PJC_000609"
     CDS             complement(21020..21739)
                     /locus_tag="AC1PJC_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HIP6619632.1"
                     /translation="MDIKLKDFEGPLDLLLHLVSKYQVDIYEVPITEVIEQYLAYIAT
                     LQAMRLEVAGEYMLMASQLMVIKSRRLLPKVVEQIDPEDDPEMDLLDQLEEYRKFKLL
                     SEKLGEQHDERANYFSKPKLDLIYDDVQLAKDKTVIDIFLAFSKVMAEKQASLRQSHA
                     TIARDEYKIEDMMDFVRSRFETGPRLELRQLFQESQDVNEMITIFLATLELVKVHEIV
                     LEQTETFGDIYLVRSEDESLS"
     gene            complement(21739..22470)
                     /gene="xerD"
                     /locus_tag="AC1PJC_000610"
     CDS             complement(21739..22470)
                     /gene="xerD"
                     /locus_tag="AC1PJC_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HIP6619633.1"
                     /translation="MKQAIESFIQSKKVSVNSQKSYTYDLQQFVTVTKGEISQQSLLV
                     YQQSLLDLKPAAQKRKMSAVNQFLYFLYENNLLDRFYKLQTMSEPASVKKKLEREDLT
                     LLFQESPWFDGQLITLLIALLGLTPSEIAELTSQQVNLDFQVLTVEKGATKRVLTLPK
                     ELIPYMESHLSGRYVFDKKGQTYSRQWFFNRLTEFVQSIGKPDWTAQKLREQYILKQI
                     DEGKSLDQIAKQLGLKTSMSLEKFR"
     gene            complement(22467..22925)
                     /gene="cbpB"
                     /locus_tag="AC1PJC_000611"
     CDS             complement(22467..22925)
                     /gene="cbpB"
                     /locus_tag="AC1PJC_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0180001 - cyclic-di-AMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-di-AMP-binding protein CbpB"
                     /protein_id="HIP6619634.1"
                     /translation="MIAREFEAFLLDQEETFLTPADKLAVIIDTHNIDHAKLLLSHMT
                     YSRVPVVTEDGRFFGTIGLTEIIKYQAENELSDDELNRDISVIVKIDEETVGLDYDLT
                     EVMRKLVDQSFLPVLGENREFMGIITRKSILKAINALLHNFPLASKEGKK"
     gene            complement(22922..23449)
                     /locus_tag="AC1PJC_000612"
     CDS             complement(22922..23449)
                     /locus_tag="AC1PJC_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HIP6619635.1"
                     /translation="MAGASKTILVMSDSHGDRQIVEDIKHYYIGKVDAIFHNGDSELD
                     SQDSLWDGIQVVNGNCDYFGGYPDQLITQLDGVTIAQTHGHLYGINYGWQRLDYWAQE
                     VDADICLYGHLHVPDAEVRGKTLFLNPGSVSQPRGLVRECLYALVTIYDDHFHVDYYN
                     RQHQLYPALTKDISR"
     gene            complement(23422..24432)
                     /locus_tag="AC1PJC_000613"
     CDS             complement(23422..24432)
                     /locus_tag="AC1PJC_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009143 - nucleoside triphosphate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-triphosphate diphosphatase"
                     /protein_id="HIP6619636.1"
                     /translation="MTDKIYEYRDEHNWFIGKASFANLFGSFGENGREQEIYQIGQLF
                     DKLIAGNYEDENFNQCVNIEVIKLQSEFALFQFACDTLNELNNRQFKVLQHQGAILVI
                     EAGKLLLVHLPQAGVSTADFFGQDKGLTSVGDTILIATKNEGKTKEFRKFFERFGYQV
                     ENLNNYPDLPDVAETGMTFEENARLKAETIAELTGKMVLADDSGLKVDALGGLPGVWS
                     SRFSGPDATDELNNAKLLHELAMVFELKDRSAQFHCTLVMAAPNRDSLVVEADWEGFI
                     GMDLRGENGFGYDPLFLVGETGKTSAELTLEEKNKISHRAQALEKLVEAFPVWQEQAK
                     QS"
     gene            complement(24429..25223)
                     /gene="racE"
                     /locus_tag="AC1PJC_000614"
     CDS             complement(24429..25223)
                     /gene="racE"
                     /locus_tag="AC1PJC_000614"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000370386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008881 - glutamate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HIP6619637.1"
                     /translation="MDNRPIGFLDSGVGGLTVARELMRQLPHEEIVYIGDSARAPYGP
                     RPAEQIREYTWQLVNFLLTKNVKMIVFACNTATAVAWEEVKEKLDIPVLGVILPGASA
                     AIKATQTGKVGVLGTAMTIQSDIYRQKIQALSPETQVDSLACPKFAPLVESNSHQSSL
                     AKKVVYETLRPLVGKVDTLVLGCTHYPLLRPIIQNAMGKDVKLIDSGAECARDISVLL
                     NYFQINRSRTEQDIQHRFYTTASPAAFKEIAESWMGIDIHVEHVEL"
     gene            complement(25313..25555)
                     /locus_tag="AC1PJC_000615"
     CDS             complement(25313..25555)
                     /locus_tag="AC1PJC_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YneF family protein"
                     /protein_id="HIP6619638.1"
                     /translation="MQLGIGLVIVLVLVALAGGVALGIYLSRKQVENYIADKPVLDEN
                     ALRLMMSQMGQKPSEAKVQQVLRQIKSQQKVASKKK"
     gene            complement(25655..26902)
                     /locus_tag="AC1PJC_000616"
     CDS             complement(25655..26902)
                     /locus_tag="AC1PJC_000616"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008836 - diaminopimelate decarboxylase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HIP6619639.1"
                     /translation="MTKTPFVSKEVLETITEQFPTPFHLYDEKGIREKACALNAAFAW
                     NKGFKEYFAVKATPTPAILKILQEEGCGVDCATDVEVLMSEKLGFKDIMFTSNDTQAQ
                     EFVYARKVGATINLDAYEHIEFLKNVAGIPETVCLRYNPGGVFSLGTDIMDHPEESKF
                     GMTKDQLLKGYKELKELGVKEFGIHAFLASNTVTNDYYPVLARQLFELALEIREETGV
                     TLDFINLSGGIGVNYRPEQEPNDIAVIGEGVRKAYEEILTPAGMGHVKIFTELGRFML
                     APHGHLITKVLHRKETYRTYVGVDASAANLMRPAFYGAYHHITNITHPDAPIEVVDVA
                     GSLCENNDKFAVNRELPRAEVGDTLVIHDSGAHGFSMGYNYNGRLRSSEILLQEDGTA
                     RMIRRAETPEDYFATIYGFEFDR"
     gene            27036..28367
                     /gene="pepC"
                     /locus_tag="AC1PJC_000617"
     CDS             27036..28367
                     /gene="pepC"
                     /locus_tag="AC1PJC_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase C"
                     /protein_id="HIP6619640.1"
                     /translation="MSTLDFDFTERLYANYLANPSLQATENAVSHNGLLKSLETRQSA
                     IDNDYVFSIDLTKDAVSNQKASGRCWMFAALNTFRHKLISDFKLENFELSQAHTFFWD
                     KYEKSNWFLEQIIATADQEIGSRKVKFLLDTPQQDGGQWDMVVALFEKYGVVPKSVYP
                     ESISSSASRELNQYLNKLLRQDAQILRDLLAKGASSKEVQIQKENLLQEIFNFLAVNL
                     GLPPRSFDFAYRDKDNVYHRDTNVTPQAFYEKYVGLKLSDYVSIINAPTTDKPYNKSY
                     TVELLGNVVGAPAVRYLNVEMNRFKELAIAQLKAGESVWFGSDVGQSSNRQTGIMATN
                     TYDFSSGLGIHFHQDKAGRLDYSESLMTHAMVLTGVDLDDNEQPLKWKVENSWGDKVG
                     DKGYFVASDSWMDEYTYQIVVRKEFLTQEELAAYQAQPQVLAPWDPMGALA"
     gene            complement(28417..29118)
                     /locus_tag="AC1PJC_000618"
     CDS             complement(28417..29118)
                     /locus_tag="AC1PJC_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HIP6619641.1"
                     /translation="MNNNSFIINQVDNTALNRFFGKIYGVVAMGIGLSALVSFLAVTV
                     FQSLLLSLLSAGSIIMMLIMIGQIALVVSASAMAAKNSPMALPMFLAYSVTNGITISM
                     ILMFYTSETVVLAFVSAALMFAIMAVIGMTTKKDLSGMAQALRAALWGIIIASVINIF
                     LRSSGLSFMMSIISVLVFSGLIAYDNQRIRNVFEQTGGNVGQGWVVSMALQLYLDFIN
                     LFLNLLRIFGGLSRD"
     gene            complement(29140..29622)
                     /locus_tag="AC1PJC_000619"
     CDS             complement(29140..29622)
                     /locus_tag="AC1PJC_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HIP6619642.1"
                     /translation="MVAYKQDKEYMHYVGHLIATPKVQKLGKIPHHYYSTRLEHSINV
                     SYTSYKIAKKFGWDAKSTARGGLLHDLFFYDWRDTKFNKSHAWVHPRIAKRNAQKLIQ
                     LNKLEEDIIVKHMFGATIAPPRYKESWIVTCVDKYWAVREWSLPLQHKWKNRKVFRFQ
                     "
     gene            complement(29669..30409)
                     /locus_tag="AC1PJC_000620"
     CDS             complement(29669..30409)
                     /locus_tag="AC1PJC_000620"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HIP6619643.1"
                     /translation="MEIIRSKANHLVKQVKKLQQKKYRTSSYLIEGWHLLEEALAAKV
                     PIEHILVSEEHVHRVAGLSNVTVVSSEIMQDLADSRTPQGVVAQLSLPNQTLPDVLTG
                     KFLVLEDVQDPGNVGTMIRTADAAGFDGVFLSDKSADIYNMKVLRSMQGSHFHLPVYR
                     MPMTAIFSALKSNQIQILATTLSSQSVDYKEVTPNPSFALVMGNEGQGISTFVADEAD
                     QLVHITMPGQAESLNVAIAAGILLFSFI"
     gene            30540..30821
                     /locus_tag="AC1PJC_000621"
     CDS             30540..30821
                     /locus_tag="AC1PJC_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HIP6619644.1"
                     /translation="MRKVKMIASGRVQGVGFRWSVQFLAVEIGDIYGRVWNNDDGTVT
                     ILAQSDNTEKLSHFIHEIRKGPSRMAKVTYLDVTLANFEDYKDFQVAYR"
     gene            30891..31805
                     /gene="yidC"
                     /locus_tag="AC1PJC_000622"
     CDS             30891..31805
                     /gene="yidC"
                     /locus_tag="AC1PJC_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002897015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HIP6619645.1"
                     /translation="MKNKRLLILSGMALSTLLFLSGCVQTDKSGNPTGPIWDWLGQPM
                     SNLIRFFAEDQALGFGLAIIIVTLLVRFIILPLGIYQSWKAAIQSEKMNYLKPILGPI
                     QERMKNASSQEEQLAAQQEYFATQKQYGVSMLGGIGCLPMLIQMPFFSAIYFAARHTP
                     GISEATFLGINLGSTSLILTGVAGILYYAQSLLMQVGMDEEQKKQMKTMALMNPIMIM
                     MFSFGSPAGVTLYWVVGGLFGILQQAITNFILKPRIRKQVEEGFKNITVSATPRKTKD
                     VTPTASAVIEEKTSNKKRNRNAGKQRSR"
     gene            complement(31889..32371)
                     /gene="greA"
                     /locus_tag="AC1PJC_000623"
     CDS             complement(31889..32371)
                     /gene="greA"
                     /locus_tag="AC1PJC_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018377052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HIP6619646.1"
                     /translation="MAEKTYPMTLEEKEKLEKELEELKLVRRPEIVERIKIARSYGDL
                     SENSEYEAAKDEQAFVEGQISTIETKIRYAEIVNSDAVAADEVAIGKTVTVQEVGETE
                     EEVYHIVGAAGADAFANKISNESPIGHALIGKKTGDVATIETPAGSYDVKILKVEKTK
                     "
     gene            complement(32445..>33307)
                     /gene="mltG"
                     /locus_tag="AC1PJC_000624"
     CDS             complement(32445..>33307)
                     /gene="mltG"
                     /locus_tag="AC1PJC_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HIP6619647.1"
                     /translation="YNLKQNMSVDDIAKALQESGTPTAQKEAAGKILIVEGYTLTQIA
                     QAITDNTKTEDKNDKTPFTTEQFMATVTNQDFINRMVATYPKLFASLPAADSGVIYQL
                     EGYLFPAVYEYSDETTIEELVEQMIAAMDNRLQPYYETITAKNLTVNEVLTLASLVEK
                     EGSTDEDRRNIASVFFNRLNAAMPLQSNIAILYAQGKLGQETTLAEDAAIDTSIESPY
                     NIYWTPGLMPGPVDSPSLSAIEAVINANTTDYLYFVADVTTGSVYFTNNIDEHNQNVA
                     KYVNAHLNNE"
BASE COUNT         9759 a         7536 c         6243 g         9769 t
ORIGIN      
        1 gccctacgac ttaacaagac acctctactt tatcataaag aaaaagtagt gagtactttc
       61 tcccgtcgga gatttcctca ctactaatct tagtatgttt ctgattactt gtaattatac
      121 gttacaaaat cggaatggtc aagtaatttt tagaaatttt ctaaacaatt tgaaaattca
      181 gtttccattg tctgaatcca ttaaaaacta acaaaaagcc actctgctta agtgactttc
      241 taaaaaactg tattcacgag cgaagcgctc atatcaaaga tagttttaac tagtcaaggt
      301 tattttaagg gaatactgac tgtatttcaa aaaaataacg atatgtagct taaacaatag
      361 ccttagatgg acattctgaa cctgtgacgg taggttctaa gactcctgtt tggaaaggat
      421 tatccctctc tttatcaatg aataggtaaa ataggctagt attcccccca ttgtattggt
      481 ccataaatca tcgatttcaa agacgcgttg ggcatcaatc agcaaatcca gtagtaattg
      541 tgtacattca ataaaaagac tgatacaaaa actataacga atcaccgctc gaaggctccg
      601 ccattcttcc ctaagaaaca aaagaagaaa aatcagaggg aaaagtagaa aaatattagt
      661 gatgttttgc aagaaaatcc accctaggtc cgccaaacta tctaccttgt ccccgttgac
      721 gatgctgttg aaaggagttg gtaaaagata gaggcggcca atctgaataa ttcctggggt
      781 cgagaaatcc ttatactgtg ggtaccaagt ctgaggtaga aaacaaagta aaacaatagc
      841 cagagcatag gctccagcta aggtcttaca aatctgtctt cctagcttgg tcaagtttcc
      901 atctgcttgg aagaattttc tcatgctcga atacctgcct ttgcttttgc ggctgcaata
      961 cgagcacggg ctttttcacg gtctttcttg agcgtattgg agcgcaattg accacaggca
     1021 gcatcaatat cggtaccatg ttcctgacga acgacacagt taacaccatt tttcttcaaa
     1081 acatcaaaga aagcaagagt acgttccttg gttgaacgac tgtactggtc atgttcacta
     1141 actgggttat aaggaatcaa gttgatataa gacaatttac ggatgttctt ggtcaaatca
     1201 gctagttcct gcgcctgttc cactccatcg ttgacctcat tgagcataat atactcaaaa
     1261 gtcacacggc ggttggtcac tttgatatag tcttcgattg cttcaaaaag aacttctata
     1321 gggaatttgc ggttaatgcg cataatgctc gaacgaaggt cattatttgg cgcatgtaga
     1381 gatactgcca agttaacttg gacaccttca cgtgcaaact cacgaatttt cggtgctaaa
     1441 cctgacgtag aaacagtgat gtgacgggca ccgattgcca agcccttgtc gtcattaacc
     1501 actcgcaaga aggtcataac attatcgtag ttatcaagcg gctcaccaat ccccatcaca
     1561 acgatatggc taacacgctc attctgattg cgctcatcca agtacttttg taccaacata
     1621 atctgagcca caatctcacc gctagtcaag tcacgttgct taggaatcaa tccagatgca
     1681 cagaatgtac agccgatatt acagccaact tgtgtcgtta cacaaacaga aagaccataa
     1741 tgctggtgca tgagaactgt ctcaatcaac atgccatctg gcagttcaaa aaggtatttg
     1801 atagtaccgt ccttagactc ctgtacaatc cgttgtttga gcgggttaac tacaaaatgt
     1861 tcttccaact tttcaatcaa agattttggc aagttggtca tttccgcaaa agattggaca
     1921 cgagaacggt agagccattc ccaaatttga gtggcacgga acttcttctc tccgttttct
     1981 aaaatccaat caaccagatt ggcttgacta aatgcataaa ttgatggttt catatttctc
     2041 cctatttctg gcggataaca aagttacgct tcacttcatt catctcacgc ttgctttgct
     2101 tacgctcacg tttttgagaa cgctctgttt gactcgcctt aacaccagca ttcttcatag
     2161 taaaatgacg ctgttccgac tgtttgtttt gctgcttccc ttttttctga cggtcattgc
     2221 gattactttt gttttctttt ggcgcaatag gctccgtccg ctgctgattt ctgttccgat
     2281 tgcgagaacg actccgcttc cgacgcggtc tatcctcctc ctcagcaggc aagtcttgtg
     2341 gattcggatt ggctaagacg aaataagcac aaccaaaatt acaatattcc gtcaaatagt
     2401 cgtccaagcg gctgattttt aagtctgatt taacattttt atcgtctgta tagaatcccc
     2461 ttaatctcag ctgctcattg ccccaatctc ccacgatata atcaaacttg agcatgagtt
     2521 gtgaaaaacg ttgaccaaaa atcgtctggt caaaagcatt cttgtaatct tccaaaaggt
     2581 ccaattcaat attttcagat acaaccttat ctccgacacg agcaaaactc ggaccagggt
     2641 atttattata gttatacatt tcaggtgaaa tttctttttt catttgtcct cctatcttat
     2701 aaaatcttca tacgtaaaaa tcatttgatt aataatctat ctggtcagaa tctaaattct
     2761 cacacttaac cttatcatta taacacgatt tatctggaaa ttcttctact ttgccattta
     2821 ggagaaattt ctgacaatta taatattatt ctctagcaaa aaaggacgat ttactcgccc
     2881 ttcgttttct tcaaataatc aatagcctct tgaacagttt tcacaggaac tacctcaata
     2941 tccaatcctg ctttctccgc agcttcttta gcttcctcat agttggtttt agcctttgga
     3001 tcttccttca aaacttccac atcaactgga ttatttggta cgaaaaagat acttgcacct
     3061 gacttagctg ctgaaataac cttcttatca gccccaccaa tgtcacctac ttttccatcc
     3121 tgctcgatag tccccgtacc agcaataatt cgaccatcac gtaagtcagg ctctgcgagt
     3181 tgagtataga tggcaagtgt aaacatcaga ccagcacttg gaccaccaat atctcccgtt
     3241 tggaaatcaa tcggaatcga actttgaacc tctgtatgat ctacgagagt aatgcctatc
     3301 ccatttttgc cattagacaa tttgataatt ttaccgtccg cagatttttc ctgaccagcg
     3361 ctaatataac caactgttac atcacttcca agttccaaac cactcacata tttaatcaaa
     3421 tcaggagaag actcaaatgt ttttccattg atactcacaa cagtgtcggc aatattaaga
     3481 acttttttaa aggtcgaatc atccgccaag gcaagtacat agacaccaaa gaaatcaaga
     3541 ttgacttctt ttcctgccaa ggtcaaacct tggtacttcg ccatattttg cgatgtctcc
     3601 atgtaaaact gtgctatacg gaaatactct tcattgtcgg cccctcctgt catctcttca
     3661 gaggaacgaa ctgtcgtata gggatcaaac tgagcagcga atagttgtaa agctgtagct
     3721 tgttggactg atacataggt gaagttgtaa gagccatcct cttggtctat ttgattgttc
     3781 accgttagta cctgacgaat atcggcagct ccacctggac tttccaaata ataaggcaga
     3841 cgaacaaaaa cggcaaacca aatcaaaaga gttcctaaaa caatagatgc aattaaggtt
     3901 aacttcctat ttttcttcat tctttctaat ctcctcacta acaatttctg gaacataagg
     3961 gcctatatcc tgtttgaaat acagcaattc tcgaacctgg ctggatgata cgaacttaag
     4021 ctctggcttg gcgattaaat aaatagtttc caaatctggc gccaactgac gattgtaaaa
     4081 atcaaaactt gactcgtatt ccaaatcggt cgcattacgc aatcctcgga ccaaatgtgt
     4141 tactccatag cgcttagcta catcgactac caattcattt tcagacagaa cgacctcgat
     4201 attctccatt cctacaaaaa gcttctccaa aatggctttt ctctccaaac ctgtcaagag
     4261 tcctgccttt ttaggattgg taaaaactcc cacatataat ttatcaaata gtccactcgc
     4321 tcgttcaatt aagtccaagt gtccattggt aatggggtca aatgagcccg taaacaatcc
     4381 aatcttatct gacatatact gttaccttac taattccgta gagtttctct ttccatatcc
     4441 ccagctctgc tatttcctcc ggaagagaga ccgccttatc cgtttcgcag actaccataa
     4501 catcatctgc tagtaagtca cggcgacaaa gttctgttat cacatcttca atttcctgct
     4561 ctgcataagg agggtccaag aataccaggt cgaaaggccc ttccacactg ttcaaagcct
     4621 gtctagcttc cattgctaga agctgaaatt tatctgcttc cttagtcatt gcaatatttt
     4681 cacggataat ggcttgtgct cgtcgatctc gctcaaccag aactgctgac tccatgccac
     4741 gagatatagc ctcgatagat aaaccaccac tgccggcgta caagtcaaga actctaccac
     4801 cctcaaaata gggaccaatc atattgaaca tggctccacg gaccttatcc gatgtcggtc
     4861 tggttgtttt tccatctaac gttttcagtg gtcttccacc atagcttccc gatacaattc
     4921 tcataaggta tattatagca aaaaatgaag ctcgttgctg aaaccaagtg cacttcctgc
     4981 tttccttttt gcaccaactt tttcaacatt ctaccaaata cactctcaac cgctatagca
     5041 ggaaatcatt ctcgcactat tcaacaaaat ggtaaaaata aaaagcaagg aaattctgtt
     5101 ttacgcgaaa ttcctcactc ttatcgtatg tatttaaatt agatcgttac aagaaaaaat
     5161 tggtgttgaa atacaaatag ctattttttt ccagtatgct aatacacccc gtagctaaaa
     5221 agcctacgga ttatctggcg aactctcgtc agctgttgga actgtttcta ctgactcaac
     5281 caggctagtt gttgaatccg tcgtttccgc cggtgtttca gaaactgttg gagtttctac
     5341 cacaggtgct ccttcactag tcggagggac tgaaacactt gtactagttg acgccacgct
     5401 gcttgtatgc tggcttgttg acctcacact ttgatttcca tatatatttt gattaggcac
     5461 tacataggat tcttgtgagg tctcactagc ttcagcaagg tccgttgact gactagtccc
     5521 tgtttcagat acttttttct catcagctac tttttgggct gcttccgccc tgaccaactc
     5581 cgcttttagc ttagcctgtg tttgagcatc tgtctgctgt cccactagct cttttacttg
     5641 gtcaatccgt ttctgtaatg ctgctttttt agtcgcatct gtaaccttgt ttactgcaga
     5701 ttgtgcctct gcaagtttct cttcagtatt tgttccttct aatacaatga cagcattctc
     5761 agcatcctga aataatgtat caaccgtttt tttctgattg ggcacttgct gtactgtctt
     5821 tgtatcactt gtttcgcttt gagcattttt ataccaacta gcgcctaagc taatcaataa
     5881 aataagtccc ataaaagaaa taatgccaat ttctgccaat gacaactttt caaatttctt
     5941 ttccatattt ttgcccttat ccgtcttatt gcataagaaa atactctagc ctactgacaa
     6001 tgctacttag tcgtttttac cttaccattc catccgttta gaccatagct taaaatatag
     6061 attttgttaa agccctgttt cttcagatga agggctgcag gcgttaccaa ctgaccacga
     6121 tcattctcat agattaagac aggtctgtcc ttacgcaaag cagctgtaga ctggcgcaat
     6181 tgctggtaag gaatatttct cgcgcctaag atatgcttac gattaaactc actcgggtct
     6241 cgcaggtcaa tcaactgacc tccgtgtatc ttttctgcaa attctgcatt atcaatcaca
     6301 gtcgctgcac gacgcaatct ccagtaatta aaacccatcc aggctcccaa tactgccaaa
     6361 aatactaaaa atacccaaaa tgtttccatc actcattctc ccttgatttc tgatactcta
     6421 attccaaacg atgttcacgc ctcaaaacaa gctctgcttc catatattcc aaccgatcta
     6481 agacacctgc ctgatagatt ctatttaatt ctatctgcat catttcaata tcgtagagac
     6541 ggttgcccat atagacaatt ataccaaacc gtttgagtaa ttgttgcaca tcataaagtc
     6601 ttttcataaa aaaattgtag cagaatttta ggtgtttttc aatataaaaa tcagttggaa
     6661 tttatgaaat gcttaaaaag gattggataa atcaccaata taatccaatt ctaatatagg
     6721 cattcagttt gcttttagta ctcgctccaa ctatctggga gatagttgga gactggggat
     6781 aaagtgatcg atgttcacgt caaaagctgc aggcataact gaagttaggc aaagtgagtt
     6841 caaataatga taaaattatt tgaagttgga aataaggaaa cgaagtttcc ccattcgccg
     6901 aagtaataaa agataaactg agtgactata tcataaccaa cccttttcct gtgccacctt
     6961 aacagcggcg gtgcggtttt cggcgcctag cttggacagg atagaggtca tgtagttgcg
     7021 gactgtcccg tcagacaggt ggagctggca ggcgatttcc ttattggaca gaccctctgc
     7081 caccagcttg agtagttgtc tttccaagtt ggttaaggga ctgcgttggg ttaggagaat
     7141 atccatcaac tctggcgaat attccttccg ccccgccaag accgtttcaa tggtccgcat
     7201 gaggtctgcg atggagcgtt ccttgagcac ataggcatcc acatctgcct tgaccgcccg
     7261 ctcgaaatag cctggtcgct tgaaggtggt catgatgacg accttgacag gcaaggcttg
     7321 cccccgcacc cattccaaga catctaggcc cgtcttttca ggcatttcta tatctaatag
     7381 caccacatct actggctctt tttccaaaag agcaatggcc tgactgccat tttctgcctg
     7441 taaaacagcc tcaaccccat cttgaaagcc caagagctga cagagggcgt cccgcagcat
     7501 tgcttggtct tctgcgacta agattctcat tctactacct cctcaaacgg aattcggatg
     7561 gacaggcggg tgggcttggc tagagagata aattccaaac ttcctttcac cgttaccaac
     7621 ctgtccttta tggtatgcaa ttcctgacca gtcaactggg caaaacccac accgttgtct
     7681 tcgtagtgta aaaccaattc ttgctggtct ttttcaaaca acaaacggca cttactagcc
     7741 cggctgtgtt tgagtaggtt attggccaac tctctcagca ccatagccag tttgttctgg
     7801 acaggtaagc tgagctgctc tgctatttcc ccgcccaaga caactaagtc cactcctgcc
     7861 aagtccaaca tctgctgtaa aatctggagt tcctctgcca cagtgtgctg cttgagggac
     7921 tggacaatct ggcggacctc ctgcatggag tccttggcca aggtctgaag gtctgccacc
     7981 tccttcttgg cctggtctat ctgatcatgg tctaacaaag tctggaccag ctcggccttg
     8041 acagacagca tggcaaagac atgccccagt gtgtcgtgca aatcctgacc gatacgattg
     8101 cgttcattct cagccagaag gagattgatg gacgcattct gctcctgtag gcgttgctga
     8161 agggctgccc gcttggtctc aatccagctg aaaatcagca aggccaagcc gaaaaagtgg
     8221 ataacaagtg caaaggctct catctcaaaa ggaacagggc caaagagagc ccataggata
     8281 atagccagca acaaaagccc gtaggacacc gtccgatagg tcggtcgatt ctctttataa
     8341 taccagccca acatattgga caggttaaag atgaagaggg aaaattgcag attgccccaa
     8401 aaactcatga cggcgatata gccaatcagg taaaaccaag ccagcatgga atagagcttg
     8461 tggtcggtat aaaagaggga gcaataaacc aaggcaaaga gaatagtcgc taggacaact
     8521 gccgtcggat tgggagtata ctgggcgtaa taaagtggaa aatagagaaa gatcatgccc
     8581 acgaagaaca tgagcggtac ctttcttttt tcaaaaatca tagttcacct cactgttgct
     8641 cagtttttct attcataact agagcaattc ctaagaaaat tatggcatat cctaggacaa
     8701 ttagcaagga tttccagaga aaatctccct cttgagtata ggtggtcacc agctggttga
     8761 catggtagct cggcatgagt ttgcagatcc gctgtaccca gtcaggaaag agggaaacag
     8821 gcatccaaga gccacccatg atggccagaa caaaataaag caagttggcc accaccgaca
     8881 tggtttgttc cgactgaatt tgcaccaaaa gcaagccaat agctagaaat acgatagagg
     8941 ttactaaaag taagagagcc gaaattaccc attcttgagc tgtcatctct acacccttaa
     9001 ctaaaccacc caccgcaaaa acaacggcaa tagaagacac aaagcagagc aagacccgca
     9061 cgagtttgga aagatagtat tgccaaatcg gcaggggaga atgctggata aaggtcaacc
     9121 agctattgtt tcgatcctca gccagcatca tgggaaaggt aaagagggca aaacccgaca
     9181 tggaaaaacc tgtcatggtc agcatatagg actggataaa ggccttttgc gtggctgtat
     9241 catcaaactg gaccgttgat gagaaaatca gaaaaaagat gacaggcatg ccgatagaca
     9301 ggagaaaaac tcccaaactt ctggataatt tgaccgcttc tacttgcacc aatgctttca
     9361 tgattcttcc tcccttgtct tgtcaaataa gctgttgagc agggttttgt tctgcacttc
     9421 taggtccgaa atccgacaac ctgcttcctg caaattcgcc caaacctgct caatagctcg
     9481 ggtcttgaag ctgaccgtgt cctgtttata gctgatgtta tcaattgcgt ccaagccctc
     9541 caccaccgtc gcaaagcgga ttggcagtgc tacttctttt tcctgctcct cacttcgcat
     9601 ggcaaatggc gtcgtatccc gcaagagcct gccctggtgc aagaccaaaa tccgctccgc
     9661 cgtatgctcc acttcctcga tgtagtggct ggtataaaaa atggtcacgc ccttttcctt
     9721 caagtcatgg acaatctccc aaaaacgctg acgggtcgac gtatccatgc ccgccgtcgg
     9781 ctcgtccaaa aaaagcaact taggcttgcc aatcaagcag atgacaaagg ccaagagccg
     9841 cttctgacca cctgatagct tgcccgccag ttgatttttt tgctctgggg aaaagcggag
     9901 caggctgtcg atttccgcat ctgtcagact atccttgtag atagcttgga aaaagcggag
     9961 caattccttg accttcaagt ccgttggaat agcattttcc tgtggcaaga ctgctactgt
    10021 ttctttatta gaccgagcct gtggagccag accgtccaac aagacctgcc ctttcgtcgc
    10081 ttttctatca cccaacaaac aggacatgag cgttgttttc ccagctccgt tgggaccaat
    10141 caaggccaca cattcccctg acttaatctc aaaggaaata tccgataaaa tggtccgtcc
    10201 tttgatgatt ttttctaact gattgacttg aatcatcctt gctctccttt ctgacatatc
    10261 accgctccaa caatcccgat aattatactt gctggcaagg accaagccaa gtaggtcatt
    10321 acttgtaatc cttgaccaaa caaaatgcag gaagcataga gaaacacaaa ggctatagtg
    10381 aaataagata tacctgtttg aacaaatgat ttcataccat tctccttact aattactgac
    10441 tgaatttctt ttacacactc agtataactt atcacccaca cccctaccag aagcctttgt
    10501 catggactca tgtgacaaat gtcatattat actcaatgaa aattaaaagt agcctaggaa
    10561 acgaagtcga agatagaact ctgttactat cttgtttcaa ggtaacaggc tgaaaaagct
    10621 tttcactcat caaggctctt gacaacggat aatgttgatt ttcgaagagt attaaataat
    10681 gcagcaaaaa agagtcctac tgtggaccct tcatctattt acaacttagg cgcttgacca
    10741 agttctgcct gcagcatcca aatatgtttt tcaatactag ccttagccac attgaaaatg
    10801 tcgttggtta cgctgtcacc ttcttcatca ctgacatcaa atcccttttg gaaaagagca
    10861 gccagatagc ggaacacctc taccacacgc gccaattgct cttcaatcgt tacagtgtaa
    10921 tcaccaggaa cttccttgag ctgactattt tcactgaact ctttaagggt agaaaacggt
    10981 gccccaccta aggtgattaa gcgctcactc atctcatcca aataaccatc aatttcttcc
    11041 atatattcat ccatctttgg atgccaaatc ataaagccac gaccacgcat ataccagtga
    11101 acttgatgga ggattgaatg ggctactgat aaatcggcca ccgcttgatt caaaacagcc
    11161 ttagaatcag ccagtgatgg acgcgggctg aaagacgcaa tttctgctgg agattgataa
    11221 tatttttgtt tcatcatata tcaccctttc ttttatttat aataattata aataaaagaa
    11281 agaaaaattg caagaattat ccctcctcct ctggcttatt gacagacaaa tcccttgcta
    11341 tattaactta tatacgttag actagtaagt atagtatgtg attttctttt tagaaaatca
    11401 tcgcccccat atgtgtatat cgaggaggga ttttatgtca gaagaaaaat ttgacgcaaa
    11461 actagaacag ctatctggct ctgcaaaaga ggtaattggt aagctgaccg gcgacaagga
    11521 aatcgaagtt gaaggacttg ttgagaaagg aattggcaaa gcaaaagagc tagtcgaaga
    11581 tgcaaaagat ggacttgaag gtgccattaa tggcatcaaa aatgctttcg acaaagaaga
    11641 gaaataaaca aagagttcaa tataggtagg attggtcgtg cactgtttga taatgaacat
    11701 tacacttaat ttggtctttt acctatagcc cgaacaaaaa tatgcaagag aggggaactc
    11761 agacatttac ctgtcgagtc tgccttctct tttcttatgc cgcgaaagga gaatctatga
    11821 aaaaaatcgt ttttgtctgt cttggaaata tttgtcgtag ccctatggct gaatttgtca
    11881 tgaaagacac gacaagtcaa tttcatattg aaagccgtgc tacttcaaac tgggaacatg
    11941 gtaatcctat ctaccctgga acacagaaaa ttttccaaaa gcacaagatt ccctatgacc
    12001 aagataaatc atcacagcaa atgagccaga cagatttcga agcatttgat attatcatcg
    12061 gtatggacag caataatgtc cgagatttac agaaaatggc accagcacat gcccaaaata
    12121 agatttttca atttgcagaa aaatccgtac cagacccttg gtatactgga gattttgacg
    12181 aaacctacga aatggtaaag aaaggttgtc aagactggtt ggacaggtta cagtcatttg
    12241 atcaagaata agattttcta tgtaatattt ttgtaatatt tgtaaaaaaa tggtaaacta
    12301 tttctgactg aactgataat ttcttactgt atcctagaaa gaactgatta gcgtcggtca
    12361 aatcctatga aagagtaaaa cgatgaaaga gttcaaatta cctagtataa aatggcatga
    12421 tataacaagt catttcaccc gtccaaaact tgaaatcctc tcccttatta ttatcctcat
    12481 ctgtaccctc tctgtattta cagggcgaat tgccagcaag caagccatga ctttcaataa
    12541 tggcgccctg cagtacaacg gttatgtggt cgcaaataaa atgaatggtc aaggaaaatt
    12601 gacctttgat aatggagatg tctacgaggg gcaatttaaa aatggaattt tccacggtca
    12661 aggaacctac acatctgcaa gtgggtgggt ttataccggg caatttaaaa acggctacgc
    12721 cgatggaaaa ggaaaattga ccaccgaagg acaagctacc tacgaaggaa cttttaaaca
    12781 ggggatttat caatatgaaa attaaatggt tatccgttat acgtgtgatt ggattagtct
    12841 ttgtcctact ctatcatttc tttatcaaat atttcccagg tggctttgtg ggggttgacc
    12901 tcttctttac cctgtctgga tatttgacaa ccgccctttt gattgatgag tttgcaaaac
    12961 ataaaaaaat agatattgtc agctttttca gaagaaggtt ctatcggatt ctcccccctc
    13021 tggttttaac gattcttttg gttcttccac ttgctctgct tgtccgcaat gatttcattg
    13081 ccaatatcgg caatcagata gccgctgcgc tcggattcat gacaaacttc tttgaaattc
    13141 tatcaggtgg tagttacgag aatcaatttt cacctcatct atttgtgcat acttggacac
    13201 tagccataga agttcagtat taccttgtct gggctggttt agtttggtat ctgactcgca
    13261 tctcaaaaag tgtggggcaa ctgcgtggat caatttttct aacatctata agcctcttct
    13321 cgctaagttt tttagcaatg tctatctcaa gtttctttgt agataatttc tcaaccattt
    13381 actactcgag cttcacacat accttcccat tcttcctcgg aagcattctc gcaaccatcg
    13441 ctggtatcgg aaatacaaca actgccttcc agcaacaagt gaatacattg actatcaaac
    13501 aagctatagg tctgtttctt ggaggactag gaatagaact tcttcttctc tttactcttc
    13561 aattcagttc catctggacc tatctaattg gttttcttct atccaattta gctacagcaa
    13621 ctatgatttt tgctgctcgg gtacttcacg agaaaaccga agatgtcaaa gaacctgcaa
    13681 ttatcctctt ctttgcaagt atttcttatg gtatctacct cttccattgg cccttgctca
    13741 ttatctttac acaactgaca aatgccacta tcgctgcggg attatccttt gttttttcta
    13801 ctatcctatc aactatttcc ttctatattc tagaaccata tattgctggt aaagtaggaa
    13861 gcttgtttgg attagcaata gacttaaaac cctataaaaa atggcttctt agcagctttg
    13921 cttgcttgac catagttggc ttaggtatct gtctgtttgc accaaaatta ggaagttttg
    13981 aacaagagag catggttagc aatctttatc aagctcagac ccaactaaat acaacacgat
    14041 ctgctgctga aaacgctaaa gctactagtt ttgaaattca aaaaggagtt atcatctttg
    14101 gcgattctgt tactgttcgc gctagttctg ccatacagac cgcgctacca gatgcacaga
    14161 tcgatggaac tgtcagtcga aatctctctg aaattgctaa attgataaat ctttataagc
    14221 aaaataatag cttgaaagag actgtagttg tagccctagg tacaaatact acggataatt
    14281 atcaggaact actagaccag ctagtcaaag attttcctaa aggacgtcgc cttatttttg
    14341 tcactcctta cgatggaaac ttcactccga gcgaatccat ttcctatcaa actggtcaat
    14401 acgagaaaga attggctgaa aaatatgatt acatttccat tgcagactgg tatcaagttg
    14461 caaaggataa tccaccaatt tggtacaata ccgaccttgt tcatttcaat cttgaaagta
    14521 atggaggcga agtcttcgcc caaacgataa aaaatgctgt tgaagccgtt gctgatggcc
    14581 caatcaaaaa ctagatttat acatcattat cctctgagaa tttctcggag gatttttgca
    14641 ctattttccg ataagtccag cgcgaactct aagaaatggc gttgtgcctg agctcagcct
    14701 caataaatct tgtgaaataa gccacttcta caaagaacgg caaagcgaag taacgataat
    14761 agagaaagat gacaagttaa aactcctacc ttttacagta ggagttggtg tcaaattgac
    14821 tatttttgct tactttggaa acgccattca aagcgtttct gatcgtaaaa tggatacatc
    14881 atttgtaaaa gagtgacggc aagtagccaa ccgccgataa tatctgtcgg atagtgaacc
    14941 ccaatataga tacgggatac agctactagg acagcaagta gaatcaacat ggcttgtagc
    15001 acaagtctag ctatgccttt cttcatcctc tggtgaacaa taataacaac tgctcctgca
    15061 atcatcatag ttgatgcagt atgccagcta ggaaatgagt aaccgatggt atcaatcaac
    15121 cattcaatac ttggacgcgg acgttggtag acatatttca gggctgtgga tgccacaccc
    15181 atcgccgcaa aactagcaag taggaaataa gcttctatct tccatttttt atagtagtaa
    15241 aagatagcag ctagaatcat ggtaatagct aaaataataa ccgtatttcc taaaacagta
    15301 atagaggtcc aaaattgact ggctccactt ggtaaatttc cacgaatggc agactggata
    15361 gtcgagtcaa aacctgctag ggtactagga taaaatttta ctacatagcc caatatcaca
    15421 aaggctagag caaaaaaaga tgcgtttcgt aaatggattt gtttattctt catacagtat
    15481 agtttacctt ataaaggtta aactttcttt aaaataggtt gagctgcttt gtaacagata
    15541 taaaatattg ctgaaagcac aatcccttgt aaaagattaa aaggaagtac catcatcaaa
    15601 agatagttag tcagacccaa gatttcttta atatcaaaat ttgcaaaggc tgcataaaca
    15661 ggcaccgcat aaacgtaatt taataccagc atcactgctg tcgaaccaag cgtcgcaata
    15721 gtcgctgctt ttaaataatt ttttaacgtt tgttcatttt tccaaaaata agctactgct
    15781 aaaatgaaaa ctgacatagc tgcaatattc atcggtaagc caataattgt cgatggtccc
    15841 tgattattta aaatcagttt gagaaaagtt cgtaccaaaa ggatagcaaa actagacttc
    15901 atatctagaa caagcagacc aaataaaatc ggtacaagag aaaaatccac ttccaggaaa
    15961 ctggctgttg gaatcagcgg aaatttcaaa tacatgagca gaaaggatac tgctgagaga
    16021 atggcgataa tcgtcatttt gcgtgtgttt gtcataaggt tcctccaatt tttgaaaatt
    16081 gaagaagcgt ggaagagcag gcaaaaagcc tccacttcgt cttctcccat ccagacttta
    16141 ctgtcggttg tggaattgca ccacatcagc tttcgctcgc agactaccaa cggtctattt
    16201 tgttctaaaa ctgcgttagc tcatctcgac atacattcag tatggtcttc gattcgctgc
    16261 ctagtcttaa aacaaattac cacgttttac actgccggtc gggaatttca ccctgccctg
    16321 aagactattt catcatacca aaaaagcctt gcatttgcaa gagcttggta agttttcact
    16381 attttaactt gtccccatca tatgtgtgaa ccaaatctag accagcgaac tgttgctgcc
    16441 gaagagcctc atatacaatc atacacgctg tattagagac attaagacta cgcacatgtt
    16501 catcattcat tggaatacgg atagccttct ctggatgttc acgcataaaa tcttctggca
    16561 agcccttatc ttcacgacca aataagaaat aatgaatgtt cccatcatta tagtcttcat
    16621 ccgaataggt tttatcagca aatttagaca ctaagtgaac acgtccttgt ttgctggcat
    16681 aatccataaa ttctgctaaa ttgtcataga agcgaacatc taacttatcc caataatcta
    16741 gtcctgcacg tttcatctta cggtcatcaa ttggaaatcc cataggctta atgatatgga
    16801 gaggactatt ggttgcagca caagttcgag caatattgcc tgtattctgt ggaatctgtg
    16861 gttcaaataa gacaatgtgg tttttggctg tttcttctat atactctaat gtttcaatat
    16921 tcataaggac ccctctgatg acatttcact aaacacgaat acccttcgaa aatcaaatcc
    16981 aaaccatgtc agctgcattt taccgtatac cagtacggtc tgttgcttgt tgtctagttt
    17041 ctttttttga ttttcattga gtaaaaagac tcgactgtct cctatagcaa gaaagacaaa
    17101 aaaatagcca cactgcccgg agtcaagctc agcaaacagc atggtgaatg atgattcatt
    17161 cacttaactc acaacaggtt tgagttaaat caatgaaatc gtgatactat tgtagcttaa
    17221 agaaggctga aaatcaagag ttttgcccca tttttttcaa attttcatag aaaatgaaaa
    17281 aggagagcaa ataaactctc ctttcttaca tttattctgc tgcaatccct ttttccgcag
    17341 tcaactcaag attttcatgg cctgatttgc tgtccgaacc gatataaacg tcgtaatatt
    17401 taacgcgttt gttaacggca gtaatacttt cacgttcaaa ggttggaatt gcaaaggctt
    17461 gttcgaatgc atattcttgc caagctttgt agttttcaat atttttctgt tcgtcaaatg
    17521 actcagcaga ggtaatttta tttaaaagtg ctgtgttttc atctgaaacg aagcgagtat
    17581 agttgtacat cgcttcaggt ccccacaatg atgttgggtc tggatctaga ccggcaatcc
    17641 aagcagcaag atagacgtca atcccctcat cattggcagc aattgattca tagaaagtat
    17701 tgtactcaat ggttcttcct gtatagagtt ccacattcaa accaatttct ttccaccatg
    17761 taaggtattg ttgtaccatg gtttcttgcg tttcggttga tttctgtgct gcaacactga
    17821 tggtaagtgg ttttccagca gcatcttcac gcataccgtc tccatcaacg tctttatatc
    17881 ctgcctcatc gagaagtttt ttagcctttt caggatcata actatagcca gctagttctg
    17941 aatcgtgaac atctccaaag aaagagataa ttagtgagtt tgtcgggtga tacaagccgt
    18001 tatataattt ctctccaatc accgcattgt ccaacgcata tcccattgct tgacgcaatt
    18061 taacattatt catcttagca ttaggattgg tcacattttt accgctggtc tcatcgtact
    18121 taccaagatt gaagccaata taattgtaaa taccatccag actacctagt aaagtaatat
    18181 ttgataagtc cttgtaagat tcgtactggt ctgttggcat atcagcaata tcataattgc
    18241 ctgctctcat ttctgcaaca atcgtatctg gtgaaacaat atcaatcctg taactgtcta
    18301 gcttaacttt ccctttaaag tagtactcat ttggtacata ggtcaccgac tcgccattga
    18361 caatttcctt gaccttataa gggcccatac cgacaacttt tgccgtacga gaatactcac
    18421 ttgattccca atctttgact gcaatatctt taaaaatgtg tttcggcatg actaaataag
    18481 gtactccccc accagcatac atcatggatg gagacatgtc tttcactgag agaactaccg
    18541 tatagtcatc aaccttctta acacctgaaa tttcacttgc tgttccagcc tgaaattctt
    18601 caaagccaat gatatttgta taggtagtat ctgcacgaac ccctgtatag tctggactag
    18661 ctagttgttc gattgtgaaa atataatcat cgatggtgaa ggcttgccca tcggaccact
    18721 tatagtcctt gcctgtcaaa ctaacggtaa ctgtctttgc ttctacatca aactctgcct
    18781 tagcaaggcc tgaatcgtct aacttacgag ctgaatcata tccaaacata gaaatatcaa
    18841 ccatgtctgc aaaggttgag tctaccgccg tttgcgataa ttcatcaatt aagataccgg
    18901 tcgaaggcgc cgaagctacc aaggcatatt taagacttcc gccttcaata gtttgtcctt
    18961 cgtgtgtcac ttctgattta aatgtcagag caacatcgct cgtcttttct ttagtttgac
    19021 atgctgttaa cgttgcaata gaaagcagac cgataccagt taaagcgatg tttttcattc
    19081 ttttcatatc cctaccccat ttatttattt tgaatagtat agcacgattt agcataaata
    19141 tgcaactacc ttaccaacaa tattcgcctt tgagtattct cacttttttc cattttaact
    19201 aaaaataaca gcgaatagag gtaaaaaaga gtacctcttc agccactact gcttcttagt
    19261 tttttatgat agtccactaa gcccaatact caatgaactc ggataagtat agtcttgtat
    19321 gtaacaaaaa ggagagtcat ttggtttatc tttgattcct tcgacgagcg gaggctgggc
    19381 aaaaagacca acctcgcttc gcagagttcg ccctatctcc agccttaaaa ggttcccaaa
    19441 ccttttgaga gagtactaaa ggcaacctaa aaacctatat ttatacaaaa caaaaagtag
    19501 gttgccctac ttctgcttat ttcttttcaa actaaacctg tccggcacag gatcttcacc
    19561 accttccaca aagggatgac agcgaccaat tcgagccaac cccatcaaaa agcccttgag
    19621 tccatatttt tgtaaggcct caatcatata agccgaacaa gttggacggt agcgacaaga
    19681 gggcggaaaa aggggagaaa taaatttctg atagaatcgg accaagccga tcaagagtct
    19741 agtcattatt ttttaactgg cttagtaaca gccagggtat gtagcttact gatgtctttc
    19801 ttgttgagct tgcggtattc tcctggacgt aggccggtca agtcaagatt accaaagcga
    19861 gtacgagaca gcttatctac ctgcaagccg acagtctcaa acatcttctt aacctgatgg
    19921 tttcgacctt catggattgt taattctaca actgagcggt tcttaacagg gtccaccttg
    19981 ataatctcat acaccgctgg cttggttttc ttaccatcaa tgacaacacc acgggtcaag
    20041 ggacgcaaga cttccttgtt ggcaacccct ttgacacgcg ccaagtaaac cttatcaatc
    20101 tcgttacgtg ggtgaatcat ctcatctgta aaatcaccgt cattggtcaa aatcaaaacc
    20161 ccagatgtat cccagtccaa acgaccaaca ggataaatcc gctccttaac tgttggcaac
    20221 aagtccacaa ccgtctttct tcccttgtcg tctgacacac tagaaataac acctcgtggt
    20281 ttattgagga gatagtagac cttctcttcg ttataaattg gttgtccctc aacctctacc
    20341 ttatcacccg atttgataac tgtccctagc tcacgaacaa cctgaccatt tacagtaact
    20401 agtccttgtt tgattagttc ttctgcctta cgacgactgg caactccagc atgggcaatg
    20461 tatttattaa ttctcatttt ctaactcatt tctttctacg aatagctctg tttcttcttg
    20521 aatcaaatct atttcagaca catcaggcaa ttcttctaga ctattaattc ccatgtaatc
    20581 caggaaataa tccgttgtca catagagatt tggtctacca agaacctctt tcttaccgtt
    20641 ctcacgaatg aggtcaaagg cctgtaattt actgatggca ccgctggaat tgactccgcg
    20701 aatatcatca acttcaatcc gagtaatggg ttgcttatag gctacgattg ataaggtttc
    20761 caaaagagcc cgtgacatag tctgattgat tggtgttttg gcatagattc gcaaaaggtt
    20821 tgcatattct tttttagtaa ccaacttgta gcgattggaa gactctaaga tggctaagcc
    20881 tgacgctttg tctgccatat atttctcact aagtttctct aactgctggc tgacagctgt
    20941 cggctgcatt tccaacatct ctgccaaatt tcgtaacgtc aagccatcct cacctgccac
    21001 aaagagcagg acttcgattt cagctaagcg attcatcttc actccttact agataaatat
    21061 ctccaaaagt ctctgtctgc tccaagacga tttcatgaac cttgaccaat tccaaagtcg
    21121 caaggaagat cgtaatcatt tcattgacat cttgactttc ttgaaaaagc tgacggagtt
    21181 caaggcgtgg accagtctcg aaacgactgc gaacaaagtc catcatgtct tcgattttat
    21241 attcatcacg ggcaatggtc gcatgagact gacggaggct tgcctgtttt tcagccatta
    21301 ctttagaaaa agctaggaaa atgtcaatga cggtcttatc cttggctaac tgtacatcat
    21361 cataaatcaa atctaatttg ggttttgaaa aatagttggc ccgttcatca tgttgctccc
    21421 ctaatttctc actgagaagt ttgaacttgc ggtattcttc caactggtcc aagaggtcca
    21481 tttcaggatc atcttcggga tcaatttgct caacaacctt cggcaataac cgacgacttt
    21541 tgatgaccat caattgacta gccatgagca tatattctcc cgctacctct aaacgcatgg
    21601 cttgcaaggt agcaatatag gccaaatatt gctcaataac ctctgtaatt ggaacctcgt
    21661 aaatatctac ttgatacttg gacaccaggt gtagcaggag atcaagtggc ccttcaaaat
    21721 cttttaattt tatatccatt atctaaattt ttccaaactc atgcttgttt ttagtcccaa
    21781 ctgcttggcg atttggtcca aggattttcc ttcgtctatc tgttttagaa tatactgctc
    21841 ccgtaatttt tgggctgtcc aatcaggctt gccgatggac tggacaaatt ctgtcagacg
    21901 attaaaaaac cattgacgag aataggtctg tcccttctta tcgaagacat agcgtccaga
    21961 cagatgagac tccatatagg gtatcaattc cttgggcaga gtgagcaccc gcttggttgc
    22021 tcccttctca actgtcagga cttgaaaatc cagattgacc tgctgactag tcagctctgc
    22081 tatttcacta ggagtcagcc ctagtaaggc aatcaaaaga gtaatcagtt gcccatcaaa
    22141 ccaaggactt tcttgaaaga ggagagttaa atcctcacgc tccagtttct ttttgacgct
    22201 ggctggttct gacatcgttt gcaatttata aaaacgatcc aggagattat tttcataaag
    22261 aaagtagaga aattgattga ccgctgacat ttttcttttc tgagcagcag gtttcaagtc
    22321 tagaagagac tgctgataga ccaaaagaga ctgttggcta atctccccct ttgttactgt
    22381 cacaaactgc tgcaggtcat aggtatagga cttttggctg ttgacactga cctttttgct
    22441 ctggataaaa gattcaatcg cctgcttcat ttcttgcctt cttttgatgc tagggggaaa
    22501 ttatgcaaga gagcattgat tgcctttaag atggattttc gagtaatgat tcccataaat
    22561 tctctatttt ccccaaggac gggtaagaaa gattgatcta ctagcttgcg catcacttct
    22621 gtcaaatcat aatccagacc aacagtctct tcatctatct ttacaatcac agaaatatct
    22681 ctgtttaact catcatccga tagttcattt tcagcttgat atttaatgat ttccgtcaag
    22741 ccgatggttc caaaaaagcg gccatcttct gttaccacag gtacgcgtga ataggtcatg
    22801 tgactgagta acagttttgc atggtcaata ttatgcgtat caataattac tgccaattta
    22861 tccgctggtg tcaagaaagt ttcttcctgg tccaataaaa aggcttcaaa ttctcttgca
    22921 atcatcttga aatatccttt gtcaatgctg ggtaaagttg gtgctgtcga ttgtagtaat
    22981 ccacatggaa gtgatcatca tagatggtca caagagcata gagacattct ctgaccaaac
    23041 cacgaggttg actaacggag ccaggattga ggaagagggt cttgccacgc acttcggcat
    23101 caggcacatg cagatgccca tacaaacaaa tatccgcatc aacttcctgt gcccaataat
    23161 ccaaccgctg ccagccgtaa ttaatgccat aaagatgacc atgagtctga gcgatagtca
    23221 caccatccaa ttgagtaatg agctggtcag ggtaaccacc aaaatagtcg cagttcccat
    23281 tgaccacttg aatgccatcc cacaaactat cttgactatc cagctccgaa tcaccattgt
    23341 gaaagatggc atcgaccttg ccaatataat aatgtttaat atcctctaca atctgtctat
    23401 ccccatgaga gtcgctcatg actaggattg ttttgcttgc tcctgccata ctggaaatgc
    23461 ctccactaat ttttctagtg cttgtgcacg gtgggaaatc ttattttttt cttctagggt
    23521 taattctgcc gaggtcttac ctgtttcacc gacgaggaag agcgggtcat agccaaatcc
    23581 gttttcccca cggaggtcca taccgataaa gccttcccag tccgcttcga caaccaaact
    23641 atcacgattt ggagcagcca tgaccagagt acaatggaat tgtgccgaac ggtctttcag
    23701 ttcaaatacc atggccaatt cgtgcaagag cttggcatta ttgagctcat ctgtggcatc
    23761 tgggcctgaa aaacgggaag accaaactcc tggcaggcca cctaaagcat caaccttcaa
    23821 accagaatca tctgccaaga ccatcttgcc tgtcagctct gctatggttt cagccttgag
    23881 ccgtgcattc tcctcaaaag tcatacctgt ttctgctaca tctggcaggt caggatagtt
    23941 gttgaggttc tcgacctggt agccaaaacg ctcaaaaaac ttacggaatt ccttggtctt
    24001 accttcgttt tttgtagcaa tcaagatggt atctcccacg cttgtcaatc ccttgtcttg
    24061 accgaagaaa tctgccgtgc taacccctgc ttggggcaga tgaaccaaga gcaatttgcc
    24121 agcttctatt accagaatag ctccttggtg ttgaagaacc ttgaactgac gattgtttaa
    24181 ctcattcaaa gtgtcacagg caaattgaaa gagggcaaat tcagactgaa gtttgatcac
    24241 ttcaatgttg acacactggt taaagttctc gtcttcataa ttaccagcaa tcagtttgtc
    24301 aaacaattga ccaatctggt aaatttcctg ctctctgcca ttttcaccaa atgaaccaaa
    24361 tagattcgca aagctggctt ttccgataaa ccaattgtgc tcatctctgt attcgtaaat
    24421 cttgtctgtc atagttctac atgctccaca tgaatatcaa tgcccatcca gctttcagct
    24481 atttctttaa aagctgccgg actagctgtt gtgtaaaatc tgtgctgaat atcctgttcg
    24541 gtacggctac ggttgatttg aaaataattt aataaaacag aaatatctcg cgcgcactct
    24601 gccccactgt caatcaactt gacatccttg cccatggcat tctggatgat ggggcgaagt
    24661 aggggataat gggtgcaacc caaaaccaag gtgtctactt tcccaacaag tggtcgaagt
    24721 gtctcataaa caaccttttt ggcaagactg gactggtggc tattggactc aaccaaaggg
    24781 gcaaatttgg gacaggctag gctgtctacc tgcgtttctg gagaaagggc ctgaatcttt
    24841 tgtcgataaa tatctgattg aatggtcata gccgttccta agacaccaac ctttccagtt
    24901 tgcgttgcct taatagctgc cgaagcacct ggtaaaataa cacccaaaac aggaatatcc
    24961 aacttttcct taacttcctc ccaggctacc gctgttgccg tattgcaggc aaagacaatc
    25021 atttttacat tttttgtcaa aaggaaattg accaactgcc aagtatattc tctgatttgt
    25081 tccgctggac ggggtccata aggtgcccgt gccgagtccc ctatataaac gatttcttca
    25141 tggggaagtt ggcgcattaa ctcacgcgca accgttaatc cccccacacc tgaatctaaa
    25201 aaacctattg gtcgattatc cataatactg agaatagcca gaaaatctga ctagcctttc
    25261 ttttctactc aaaaaatggg atctgggaat gaatatccca gtcccagttt gattattttt
    25321 tcttgcttgc cactttttgt tggctcttga tttggcgaag tacttgttgt acttttgctt
    25381 cgcttggttt ttgacccatt tggctcatca tcaagcgcaa ggcattttca tccaaaactg
    25441 gcttgtcagc aatgtagttt tccacttgtt tgcgtgacaa gtaaatcccc aaggctacac
    25501 cacctgcaag tgccacaagc accaaaacaa ttactaaacc gatacctaat tgcatatcaa
    25561 tctcctgatt ttctaaaaaa taattcatct ggtattgcat cgcgcaatct catactgaca
    25621 ctattatacc aaattcccca agcttttcca agacttacct gtcaaattca aaaccgtaaa
    25681 tggtagcgaa atagtcttca ggagtttcag cgcgacggat catccgcgct gtaccatctt
    25741 cctgcaagag aatttcagaa gaacgcaggc gaccgttgta gttgtagccc atagagaagc
    25801 cgtgggcacc actgtcatgg atgaccaagg tgtctcctac ttctgcccgt ggtaattccc
    25861 gattgactgc aaacttgtcg ttgttctcgc agagagaacc tgccacatcc accacttcga
    25921 ttggcgcatc tgggtgcgta atgttggtga tatggtggta ggctccatag aaggctgggc
    25981 gcatgaggtt ggcagctgat gcatcgacac cgacataagt ccgataggtc tccttacggt
    26041 gaagcacttt ggtaatcaag tgaccgtgtg gcgccaacat aaagcgcccc aattctgtaa
    26101 agattttgac atggcccata cctgctggag taagaatttc ctcataggcc ttacgaactc
    26161 cctcaccaat gacagcaatg tcatttggct cttgttccgg acgatagttg acaccaatcc
    26221 cgcctgagag gttgataaag tctaaggtca cacctgtttc ctcacggatt tccaaggcca
    26281 attcaaagag ttggcgagct aggacagggt agtaatcatt ggtcacagtg tttgatgcca
    26341 gaaaggcatg aatcccaaat tccttgacac caagctcttt caattccttg tagcccttca
    26401 gcagctggtc cttggtcatg ccaaacttag actcttcagg atggtccata atatccgttc
    26461 ccagtgagaa aaccccacct ggattgtaac ggaggcagac tgtttctgga ataccagcta
    26521 cgtttttcaa aaattcaata tgctcatagg catccaggtt aatggtcgcc ccaacttttc
    26581 tggcatagac aaattcttgc gcttgggtat cattggatgt gaacatgatg tccttaaagc
    26641 ccaatttttc actcatgagc acttctacat ccgttgcaca gtccactcca cagccttctt
    26701 cttgaagaat ttttaaaata gctggtgttg gagtcgcctt gaccgcaaaa tattccttaa
    26761 agcccttgtt ccatgcaaat gctgcattga gggcacaggc cttctcacga atgccttttt
    26821 catcatacaa atgaaaggga gtgggaaatt gctccgtaat ggtttctaaa acttctttac
    26881 tgacaaatgg tgtcttggtc atctctctac ctcatcaaat atttttccta ttatatcaca
    26941 aatatgtgag gaactgtagc tttcaactcc accaaatact tgcaaaataa attatgagcg
    27001 ctataatgtg attatcatta aaaaaggagt aatatatgtc aacattagat tttgatttta
    27061 cagaacgctt gtatgccaac tatctagcta atccaagcct acaggcaacc gaaaatgccg
    27121 ttagccataa cggacttttg aaatccttag aaacacgcca aagcgccatc gacaatgact
    27181 atgtcttttc aatcgatttg accaaggacg ctgtttcaaa ccaaaaggct tctggacgtt
    27241 gctggatgtt tgctgcattg aacaccttcc gccacaagct catctctgac ttcaaactgg
    27301 agaattttga gctatcacag gcccatacct tcttttggga taaatatgaa aaatccaact
    27361 ggttcctcga acaaatcatt gccacagctg accaagaaat tggtagccgt aaggtaaaat
    27421 tcttattgga taccccgcaa caagatggcg gtcaatggga tatggttgtt gccctatttg
    27481 aaaaatatgg tgtggtaccg aaatccgtct atccagaatc tatctcatcc agtgccagcc
    27541 gtgagctcaa tcagtacctt aacaaattgc tccgtcaaga tgcacaaatc ttgcgagacc
    27601 tccttgccaa aggagcttcc tcgaaagaag ttcaaataca aaaagaaaac ttacttcaag
    27661 aaatctttaa cttcctagcc gtcaaccttg gactccctcc acgcagcttt gattttgcat
    27721 atagagataa agacaatgtc tatcaccgcg atacaaatgt aacacctcag gcattctacg
    27781 agaaatacgt tggtttgaaa ctatctgact atgtctccat tatcaacgcc cctacaactg
    27841 acaaacccta caataaatct tatacagtcg aattattggg gaacgtcgtt ggtgcccctg
    27901 ctgtccgcta cctcaatgta gaaatgaacc gttttaaaga actggctatt gcccaactca
    27961 aagctggtga gtccgtttgg tttggttccg atgtcggtca aagcagcaat cgccaaacag
    28021 gtatcatggc aaccaacacc tacgacttct cttcaggtct aggtatccat ttccatcaag
    28081 acaaggctgg aagattagac tactccgaga gcttgatgac ccacgctatg gtcttaactg
    28141 gtgttgattt agatgacaat gagcaacctc tcaaatggaa agtagaaaat tcttggggtg
    28201 acaaggttgg tgacaaggga tacttcgtcg catcagatag ctggatggac gagtatactt
    28261 atcagattgt tgtccgaaaa gaattcctca cacaagaaga actagcagct tatcaagctc
    28321 aaccacaagt ccttgcccca tgggatccaa tgggagctct agcataacaa acgacatata
    28381 aaaaaagagg gcaaccctct tttttatatg tcataattag tctctactca aaccaccaaa
    28441 gatacggagt aggttgagga agaggttgat gaagtcaaga tagagctgga gcgccatgga
    28501 tacgacccaa ccttgaccaa cattaccacc agtttgttcg aaaacattgc ggatacgttg
    28561 gttgtcataa gcaatcaaac ctgagaatac caaaacagaa atgatagaca tcataaagct
    28621 tagaccagag ctacgaagga agatattaat aacacttgca ataataattc cccatagagc
    28681 tgcacgtaat gcctgagcca taccagaaag atccttcttc gttgtcatcc caattacagc
    28741 catgatagca aacataagag ccgctgacac aaaggcaaga acaactgttt cgctggtata
    28801 gaacatcaag atcatgctga tggtaatccc atttgttact gagtaggcaa gaaacattgg
    28861 tagagccatt gggctatttt tagctgccat tgctgaagca gaaacaacca aggcaatctg
    28921 accaatcata atcagcatca tgatgatgga acctgcactc agcagactaa gcaataaaga
    28981 ttgaaagacg gtcacagcca agaaagaaac tagagctgac agaccaattc ccatggcaac
    29041 cacaccataa attttaccga agaaacggtt gagggcggta ttatccacct gattaataat
    29101 aaatgaattg ttattcatac tattctcctt taaatcatct tattgaaacc gaaagacctt
    29161 acgatttttc cacttgtgtt gtaagggcag actccactct ctcacagccc aatacttatc
    29221 cacacatgtc acaatccagg attccttgta gcgaggagga gcgattgtcg caccaaacat
    29281 atgcttcaca atgatgtctt cttctagttt attgagttga atgagtttct gagcattgcg
    29341 tttagcaatt cgtggatgaa cccaagcatg gctcttgttg aatttggtat ctctccagtc
    29401 atagaagaat aaatcatgca atagaccacc acgagctgtt gacttggcat cccaaccaaa
    29461 ttttttcgca atcttatagc ttgtataaga gacattgatg gaatgttcca agcgcgtgga
    29521 gtaataatga tgaggaatct tccccaattt ttgcaccttg ggtgtggcaa tcaagtgccc
    29581 cacgtaatgc atgtattctt tatcttgttt atatgcaacc attcgttaac ctcgttggaa
    29641 tattatacca cactatagta cacttggctt aaataaagct aaacaataga atacccgccg
    29701 caatggctac attgaggctt tccgcctgcc ctggcatggt aatatggaca agttgatccg
    29761 cctcatcggc tacaaaagtt gaaattcctt gaccttcatt tcccatgacc aaggcaaaac
    29821 tcggatttgg cgtaacttcc ttatagtcaa ccgactgact agagagggtt gttgccaata
    29881 tttgtatctg attgcttttt aaagcagaaa aaatagcagt catcggcatc cgataaactg
    29941 gcaagtggaa atgactccct tgcatggaac gcagaacttt catattgtaa atatctgccg
    30001 acttatctga tagaaatact ccatcaaaac cagctgcatc agctgtacga atcatggtac
    30061 caacatttcc agggtcctgc acatcctcca gaaccaaaaa ttttcctgtt aagacatcgg
    30121 gtaaggtctg atttggtaag gacagttgag ctactacccc ttgcggtgtc cgtgagtctg
    30181 ccaaatcctg cataatttct gaactaacaa ctgttacatt ggataaacca gcaacccgat
    30241 gaacatgttc ttctgatacc aaaatatgtt caataggtac tttggctgcc aaagcttcct
    30301 ccaacaaatg ccaaccttca atcaaataag aagaagtacg gtattttttc tgttgtaatt
    30361 ttttaacctg cttgaccaaa tgattggcct ttgagcgaat gatctccatg aatgcccctt
    30421 tttcttttac tgctcagcaa cttcaatttc ccaacggcta aatcaattat cttgattttt
    30481 gaacagtctt acccaaccat gatataataa agtaaatgtc ttgtcaaaag gagaaactta
    30541 tgcgaaaggt aaaaatgatt gcatctggtc gtgtgcaagg agtcggcttt cgttggtctg
    30601 ttcaattttt agctgtggaa ataggcgaca tctacggcag agtttggaat aatgatgatg
    30661 gaactgtcac cattttagct cagtcagata atactgagaa gctcagccat tttatccatg
    30721 aaattcggaa agggccttct cgtatggcca aagtcaccta tctagatgtc accctagcca
    30781 acttcgaaga ctataaggat tttcaggtgg cgtatagata aaacttgtat attttgaaca
    30841 aaaaaagtaa aatagagagt atactgaaaa aaacaaagga tcgaaaaaaa ttgaaaaata
    30901 aacgtctact catcttgtca ggcatggcct tatcaactct tcttttctta tctggttgtg
    30961 ttcaaactga taaaagcgga aatcctacag gccccatttg ggattggttg ggacaaccaa
    31021 tgtccaactt gattcgcttt tttgcagaag atcaagctct aggatttggt cttgctatta
    31081 tcatcgtcac cttattggtt cgattcatca tcctcccatt gggaatttac caatcttgga
    31141 aagctgctat ccaatctgag aagatgaatt atctcaaacc gattttaggc ccaatccagg
    31201 agcgcatgaa aaatgcaagc tctcaagaag agcaacttgc tgcgcaacaa gagtattttg
    31261 caactcaaaa acaatacggt gtgagcatgc tcggcggaat cggttgtttg ccgatgctga
    31321 ttcaaatgcc attcttctct gcaatctact ttgcggctcg ccacacacca ggaatttcag
    31381 aagctacttt ccttggtatt aatttaggtt caactagcct gattttgaca ggcgttgctg
    31441 gtattttata ttatgcccaa tcgctcttaa tgcaagtcgg catggatgaa gaacagaaaa
    31501 aacaaatgaa aaccatggct ctgatgaatc caattatgat catgatgttc tcatttgggt
    31561 ctcctgctgg agtgactctc tactgggttg tcggtggtct cttcggtatt cttcaacaag
    31621 ctattacaaa cttcattttg aaacctcgta ttcgtaaaca agtggaagag ggcttcaaaa
    31681 atatcacagt gtcagcaact cctcgtaaaa cgaaggacgt tactccaact gcttcagcag
    31741 ttattgaaga aaagacatct aacaagaaga gaaaccgtaa tgcaggaaaa caacgttcta
    31801 gataataaac actaaaagat tggaatttcc aatctttttt agcaccttcg tgaataaaaa
    31861 gagagaatct ttcgactctc tccacacctt atttcgtttt ttcaaccttc aagattttta
    31921 catcatagct accagcaggt gtttcaattg ttgcaacatc tcctgttttt ttaccaatca
    31981 aagcatggcc aattgggctt tcgtttgaaa tcttgtttgc aaaggcatct gcacctgcag
    32041 caccaacgat atgatagact tcttcctcgg tctcaccaac ttcttgaaca gtcacagtct
    32101 taccaatcgc tacttcatcc gcagcaactg catcactgtt tacgatttca gcatagcgaa
    32161 tctttgtttc gattgttgag atttgacctt caacaaaagc ctgttcatct ttagctgctt
    32221 cgtactcaga gttttctgaa aggtctccgt aagaacgagc aattttaata cgttcaacaa
    32281 tttctggtcg acgaactagc tttagttcct ctagttcttt ttctaatttt tccttttctt
    32341 ccaaggtcat tggatatgtt ttttctgcca tttgtctttc cttttctttt atttttcatg
    32401 aaaacaaaat tatgtggaaa accacataat tttgttgtaa gaatttactc attattaaga
    32461 tgtgcattta catacttagc aacgttttgg ttatgttcat caatattatt tgtaaagtaa
    32521 acacttccag ttgtaacatc tgctacaaag taaagatagt ctgtcgtgtt ggcattaatc
    32581 actgcctcga tagccgaaag gcttggacta tccactggtc caggcatcaa tcctggtgtc
    32641 caataaatgt tgtatggtga ctcaattgat gtatcaatcg ctgcatcttc tgctagagtt
    32701 gtttcttgac caagtttacc ctgagcatac aagattgcaa tattggattg tagaggcatt
    32761 gctgcattca agcggttaaa gaagacactt gcaatgtttc gacgatcttc atcagtagat
    32821 ccttcttttt caaccaaaga tgccaaggta agaacttcat ttacagtcaa attcttagca
    32881 gtaatcgttt cataatatgg ttgtaaacga ttatccatcg cggcaatcat ttgctcaacg
    32941 agctcttcga tagttgtctc atcgctgtat tcataaaccg ctgggaagag gtaaccttcc
    33001 aactgataaa taactccact gtcagcagca ggtaagctgg caaacaattt tggataagta
    33061 gcaaccattc gattaataaa atcttggttg gtcacagtag ccataaattg ttctgtggta
    33121 aatggtgttt tatcattttt atcttctgtc ttggtattat ctgtaatagc ctgagcaatt
    33181 tgtgtcagtg tatacccttc aacaatcaaa atcttacctg cggcttcttt ttgagctgtc
    33241 ggagtgccac tttcttgaag tgctttggcg atgtcatcca cagacatatt ttgttttaaa
    33301 ttataaa
//
LOCUS       DBNFCX010000016        33249 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.016, whole genome shotgun sequence.
ACCESSION   DBNFCX010000016 DBNFCX010000000
VERSION     DBNFCX010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 33249)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33249)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33249
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.016"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..1133
                     /locus_tag="AC1PJC_000625"
     CDS             <1..1133
                     /locus_tag="AC1PJC_000625"
                     /inference="COORDINATES: protein motif:HMM:NF018196.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HIP6619648.1"
                     /translation="DTTDVVRDGEVGSTYETSVGNFEGYTFVKVDEKGATPTGEVEEG
                     EKTVVYIYTKVETPVAKTGSVLVRHITDKGEVLADTTDVVRDGEVGSTYETSVGNFEG
                     YTFVKVDEKGATPTGEVEEGEKTVVYIYTKVETPVVKTGSVVARYVIEGTEDEIADDK
                     SVKPTDTPVDEPYGDTPPATITKDGKTYELVRTRTNEGDAPSNGTVVEGEQTITYEYK
                     EKVETPVVPPVVEKQGKVIVHYVDEKGNVIKTPVVDTENGTVGGDYDTSDNRPKVIVF
                     NGKRYILVESRIPNNSKGKVVEGETHVTYVYKQENEEPTTPTTPNQPTTPSTTPVTET
                     AKVTPKTSAILPETGESTSVLALVGLALLGTVAVASRRRKAK"
     gene            1295..1588
                     /locus_tag="AC1PJC_000626"
                     /pseudo
     CDS             1295..1588
                     /locus_tag="AC1PJC_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636190.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            1657..1899
                     /locus_tag="AC1PJC_000627"
     CDS             1657..1899
                     /locus_tag="AC1PJC_000627"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619649.1"
                     /translation="MPTDWCQRAPLQRNLSAENTSFKQELQAVQKDHDLLLPQDEITS
                     RGDFQPDWLQRGQRLQPCHKNRIGVTVTDYKKQQGL"
     gene            1990..2256
                     /locus_tag="AC1PJC_000628"
     CDS             1990..2256
                     /locus_tag="AC1PJC_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002905356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HIP6619650.1"
                     /translation="MKAIVTVVGKDKSGIVAGVATKIAELGLNIDDISQTVLDEYFTM
                     MAVVSSDEKKDFTKLRAELEAYGQALNVKINIQSAAIFDAMHNL"
     gene            2268..3605
                     /locus_tag="AC1PJC_000629"
     CDS             2268..3605
                     /locus_tag="AC1PJC_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018166727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PFL family protein"
                     /protein_id="HIP6619651.1"
                     /translation="MDIRQVRETIEMIEEQHFDIRTITMGISLLDCIDSDIDKAAEKV
                     YTKIVTKAKNLVAVGDEIAAELGIPIVNKRVSVTPIALIGAATDATDYLPLAHALDKA
                     AHEIGIDFIGGFSALAQKGYQKGDEILINSIPQALAQTSKVCSSVNIGSTKTGINMTA
                     VRDMGRIIKETAEASDMGAAKLVVFANAVEDNPFMAGAFHGVGEADVVINVGVSGPGV
                     VKRALEKVRGESFDVVAETVKKTAFKITRIGQLVGNMASERLGVKFGIVDLSLAPTPA
                     VGDSVARVLEEMGLETVGTHGTTAALALLNDAVKKGGVMACNQVGGLSGAFIPVSEDE
                     GMIAAVQNGSLNLEKLEAMTAICSVGLDMIAIPETTPAETIAAMIADEAAIGVINQKT
                     TAVRIIPLGKEGDMIEFGGLLGTAPVMKVNQASSVDFINRGGQIPAPIHSFKN"
     gene            3681..4376
                     /locus_tag="AC1PJC_000630"
     CDS             3681..4376
                     /locus_tag="AC1PJC_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HIP6619652.1"
                     /translation="MADVRLYISRHGKTMFNTIGRVQGWCDTPLTKAGEEGIRELGLG
                     LKDAGLEFKLAVSSDLGRTVQTMTIAQRELGILGKIPYYQDKRIREWCFGSFEGMYDA
                     ELFQGVLPRLKGTVDATGMSFAEIAAGIQEADTAGWAESWEVLSNRILTGFESIAQDL
                     EKQGGGNALVVSHGMTIATLAHLLEPERGANVFLDNGSITVLKYENGKLLIEAVGDLS
                     YRKCGAELIAQGK"
     gene            4599..5633
                     /gene="hrcA"
                     /locus_tag="AC1PJC_000631"
     CDS             4599..5633
                     /gene="hrcA"
                     /locus_tag="AC1PJC_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001872861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HIP6619653.1"
                     /translation="MITQRQNDILNLIVELFTRHHEPVGSKTLQEMIASSSATIRNDM
                     AKLEQLGLLEKAHTSSGRMPSRAGFQYFVNHSLNLEHINEEDVYQVVKAFDFEAFKLE
                     DILERASTVLADLTGYTSVILDVEPTSQQLTSFDIVQLSSHDALAVLTLDQSKPVTVQ
                     FAIPKNFMTRDLEVLKRLVDERFVDQTVLSIHYKLRTEIPQVVQRYFTTTDNVLDLMD
                     YIFSNLFQESVFISGKVASLTYGNLATYQLLDSAQLLAPELRQGLAPAQQTSISVAEH
                     RDPALADVTVIHHRFPIPYRGMAQMSLLGPVDMDYRRQMSLINIISRVLFMKLTDYYR
                     YLSSNHYEVN"
     gene            5646..6158
                     /gene="grpE"
                     /locus_tag="AC1PJC_000632"
     CDS             5646..6158
                     /gene="grpE"
                     /locus_tag="AC1PJC_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HIP6619654.1"
                     /translation="MSEEIKNEEIVEEVEATEEVVETPEKSELDLANERAEEFENKYL
                     RAHAEMQNIQRRANEERQTIQRYRSQDLAKKILPSLDNLERALQVEGLTEDVKKGLEM
                     VQESLIQALKEEGVEEVATDVFDPNLHMAIQTVPATDDCPAEHIAQVFQKGYKLHERL
                     LRPAMVVVSE"
     gene            6159..6590
                     /locus_tag="AC1PJC_000633"
     CDS             6159..6590
                     /locus_tag="AC1PJC_000633"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIP6619655.1"
                     /translation="MIELREISDENFYDCLHIYSGISKEDYVDSVEFSLAEAWSLRPF
                     SHPKAIYNGMDLIGYVSLYCKDRNGEIINFVIDKQHQGKGLGRKAVEVCIDYLQTEHS
                     VTQVSLPVHEKHLEARKFWKKLGFQESNNIEDDYIFMRRTL"
     gene            6784..8607
                     /gene="dnaK"
                     /locus_tag="AC1PJC_000634"
     CDS             6784..8607
                     /gene="dnaK"
                     /locus_tag="AC1PJC_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002946936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HIP6619656.1"
                     /translation="MSKIIGIDLGTTNSAVAVLEGTESKIIANPEGNRTTPSVVSFKN
                     GEIIVGDAAKRQAVTNPDTIISIKSKMGTSEKVSANGKEYTPQEISAMILQYLKGYAE
                     EYLGEKVTKAVITVPAYFNDAQRQATKDAGKIAGLEVERIVNEPTAAALAYGLDKTDK
                     DEKILVFDLGGGTFDVSILELGDGVFDVLATAGDNKLGGDDFDQKIIDHMVAEFKKEN
                     GIDLSADKMALQRLKDAAEKAKKDLSGVTSTQISLPFITAGAAGPLHLEMTLTRAKFD
                     ELTYDLVERTKIPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVKAETGKEPNKS
                     VNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSK
                     SQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEVTFDIDK
                     NGIVSVKAKDLGTQKEQTIVIQSNSGLTDEEIDRMMKDAEANAEADKKRKEEVDLRND
                     VDQAIFATEKTLKETEGKGFDAERDQAQAALDELKAAQEANNLDDMKAKLENLNEKAQ
                     ALAVKLYEQAAAAQQAAAGQEGAQTANNAGDDVVDGEFTEK"
     gene            9231..10367
                     /gene="dnaJ"
                     /locus_tag="AC1PJC_000635"
     CDS             9231..10367
                     /gene="dnaJ"
                     /locus_tag="AC1PJC_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002905343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HIP6619657.1"
                     /translation="MNNTEFYDRLGVSKNASPDEIKKAYRKLSKKYHPDINKDPGAED
                     KYKEVQEAYETLSDPQKRSAYDQYGPAGANGGFGGGAGGFGGFDGAGFGGFEDIFSSF
                     FGGGGATRNPNAPRQGDDLQYAVNLKFEEAIFGVEREVSYNREATCRTCTGSGAKPGT
                     SPVTCGRCHGSGVINVDTQTPLGTMRRQMTCDVCHGRGKQIKDPCTTCHGTGHEKQAH
                     TVTVKVPAGVETGQRIRLAGQGEAGFNGGPYGDLYVVIQVQPSDKFEREGTTIHYKLN
                     LNFVQAALGDTVHVPTVHGDVDMVIPEGTQTGKTFRLKGKGAPSVRGGAIGDQYVTVN
                     IVTPTGLNDRQKAALKEFAAAGNIDVKPHKKGFFDKVKDAFEDL"
     gene            10494..11321
                     /locus_tag="AC1PJC_000636"
     CDS             10494..11321
                     /locus_tag="AC1PJC_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase family protein"
                     /protein_id="HIP6619658.1"
                     /translation="MKSWVENVTIKKYEDRSGLTGLKQGPLVWTEVFLREVNRQSNTG
                     ILHFWPMDQTVILGMMDSQVAQLDKGLASIGQAGYSPIIRSLGGLAVVADDGILNVTL
                     ILPNPSGHKVDLRESYQVMVDLIAQALSDFPFEIVSGEVATSYCPGTYDLSIKGRKFA
                     GLAQRIYQEAIAISAYISVSGNQVKRGQVVADFYAASFAPQEVSGRFPQVNPDSMANL
                     SDLVCQALTVEDMKTRIERVLIENGAFLSTFYPSSDNMTDFMALGKTIKQSMEKYGI"
     gene            11330..12529
                     /locus_tag="AC1PJC_000637"
     CDS             11330..12529
                     /locus_tag="AC1PJC_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent flavin oxidoreductase"
                     /protein_id="HIP6619659.1"
                     /translation="METYQALFEALPLHQTVLANRFVLSPMVTNSSTADGLVTQEDLS
                     YAERRADAAPLQITGAAYVDPKGQLFEFGFSVAKDEDVDGLRKLAQVMQSKGAKAILQ
                     LTHAGRFSSHTLQRDKLVYGPSPMKLHAPFPHEVKELTIAELEELVEAYGQATRRAIE
                     AGFAGVEISSAQRLLIQTFFSTFSNQRQDRYGCQNLENRSRFGLEVLRKVQEVIDQLA
                     PADFILGFRATPEETRGASIGYSIEEFLQFMDLALEVARIDYLAIASWGHDVFRNQVR
                     GAGRHQGRLVNQVVHDALKDRLVVMATGGINSAEKAIEALEHADMVGLSTPFITDPEF
                     AHKIAADKPEDIQLRIKPEDLSKLAIPQASFKDIVPLMDYGESLPRESREVFRSLYSS
                     KIKPRRC"
     gene            12627..13622
                     /locus_tag="AC1PJC_000638"
     CDS             12627..13622
                     /locus_tag="AC1PJC_000638"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MsnO8 family LLM class oxidoreductase"
                     /protein_id="HIP6619660.1"
                     /translation="MKISLLDYGLLDEGRTYQEAWQDSLALVQAADRLGYHRFWLAEH
                     HNVHALTIGSPEVMIPYLTSQTQRIHLGSGGIMGLHYSPYKIAELAASLETLFPGRVD
                     IGLGNSTGTALVKEHMRSQFQPSQFDQWVQQFTGYLTGKDEAISLSPKLASYPEIFTL
                     GMGGQSMALSAKEGLGYVFGSFPYIPHDPVETAGKLAQDYRRDFQPSDVMAQPHFALA
                     LFVVIAETSQEAEDLAKSLDIWMLGKQDFNEFSHFPSLATYQAYELTEQDRERIAQHR
                     SRMIIGNPAEVKEQLERLVAACQPDELLFIPLVSGIDNRLKAIELLAQIVESETL"
     gene            13619..13951
                     /locus_tag="AC1PJC_000639"
     CDS             13619..13951
                     /locus_tag="AC1PJC_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000717324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein H"
                     /protein_id="HIP6619661.1"
                     /translation="MKKIANYLWVEKEDAIYTIRMTAELQDDVGTLGFVIFSDKEVLE
                     VNDEILNLEASKTVMAILTPIAGRVVERNTAALEQPTLLNSEKPEENWLIRLTDVSEE
                     AFLALEDA"
     gene            13944..14765
                     /locus_tag="AC1PJC_000640"
     CDS             13944..14765
                     /locus_tag="AC1PJC_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-ADP-ribose hydrolase"
                     /protein_id="HIP6619662.1"
                     /translation="MLKEEMLGLLTAMIEILQAEKGEPQSAELELASLEEALPIWRGL
                     VNQRPAGPIGADYLVAEAAFLAAYHEEHIQDVSVCQPTSDPQIFLYPGDLCHLQVDAV
                     VNAANSQMLGCFIPNHACLDNALHTFAGLELRQFCAKKMEEQGLPAAVGKVMVTPGFH
                     LPAGLVFHTVGPFISEGKPVSPIRKGLLEQCYLSCLEEAKARGLKAMAFPALSTGEFG
                     YPKDQAAEVAVHTVRKWLTETAYSLQIIFSTYTVEDQGYYIALLGEKEDVHVADA"
     gene            14743..15639
                     /locus_tag="AC1PJC_000641"
     CDS             14743..15639
                     /locus_tag="AC1PJC_000641"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0017136 - histone deacetylase activity,
                     NAD-dependent [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIR2 family NAD-dependent protein deacylase"
                     /protein_id="HIP6619663.1"
                     /translation="MSMWQTLKQEEKTQAELLAGLLAEADAVVVGIGAGMSAADGFTY
                     IGPRFEAAFPDFIAKYGFLDMLQASLFDFESTEEYWDFQSRFVALNYLDQPVGDSYIH
                     LREILETKPYHIITTNADNAFWVADYDKDKVFHIQGEYGLWQCSRHCHDQTYRDDALI
                     RRMIAEQEDMKIPYDLIPRCPVCDAPFEINKRNAEKGMVESPDFFAQKARYDAFLEDH
                     QTGKVLYLEIGIGFTTPQFIKTPFQTRVQQNSHALYVCLNQKHYRLPLPIRGRSLTLA
                     EDSAQLLKETHRIYFKGDTPCT"
     gene            15630..16655
                     /locus_tag="AC1PJC_000642"
     CDS             15630..16655
                     /locus_tag="AC1PJC_000642"
                     /EC_number="6.3.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017118 - lipoyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase"
                     /protein_id="HIP6619664.1"
                     /translation="MYLIEPIRNGQYVSDGAVALAMQVYVQQNVFLDDDILFPYYCDP
                     KVEIGKFQNALVEINEDYLKENNILLVRRDTGGGAIYVDKGSVNVCYLIQDNGIFGDF
                     KRAYQPAIKALHELGAVEVEQTGRNDLVIEGKKVSGAAMTISNNRVYGGYSLLLDIDE
                     EAMSKVLNPNKKKIESKGIKSVKSRVGTIRPYLAEEYQSVTTEEFKNLITCKLLGIDS
                     IDQAKRYVLTEEDWAAIDKLVADKYKNWEWNYGNSPQYSYHRDGRFAGGTVDIHLEVE
                     KGRIAKCRIYGDFFAKGNIDEVENKLIGTRLLEEDLQAVLADLDMAHYFGKISAEELV
                     GLMLSEG"
     gene            16675..18123
                     /locus_tag="AC1PJC_000643"
     CDS             16675..18123
                     /locus_tag="AC1PJC_000643"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HIP6619665.1"
                     /translation="MEWKDATAMAQAVNQKQVSAKELVQETIDRIEKLNPTLNAVVSK
                     QYEEALKEAEKEDYLGKPFAGVPFLLKDLGQNEKGQPSSAGSRLLAGRPAGHTDTYVQ
                     RLKDLGFIIVGRTNTPEFGFKNISDASLHGPVNLPLDPSRNAGGSSGGAAAALASGMV
                     SIAAASDGGGSIRIPASFNGLIGLKTSRGRIPVGPKSYRGWQGASVNFALTKSVRDTQ
                     RLLYHFQDYQLEAPFPLAKLSEEEVFGKLSRPLKIAYYTKSPVGSKVSSEAVEAVQKA
                     CHHLANLGNEVVELSEYPLDGVALMKSFYLMNSVDTAQMFDEIEAAFGRQMTLDDMEV
                     MSWAIYQSGQTIPAKLHSKALLDWDQFGASMARFHEEYDLLLTPTVADVAPKHGQFDL
                     SADLLDRLKQTQNYSMEEQQELIWQMFEDSLALTPFTQQANIYGQPAISLPTYVRADG
                     LPIGIQLTAAKGREDLLLQLADQMEAASLLYL"
     gene            18246..19121
                     /locus_tag="AC1PJC_000644"
     CDS             18246..19121
                     /locus_tag="AC1PJC_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000751024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HIP6619666.1"
                     /translation="MLKKVLASALLVSTLTLAACSSSSSNTSSSSAEQTQWEKVQEAG
                     VLKVATPGTLFPTSYYNGAKELVGYEIDMINEIGKRLKLEIEYQEIGVAEAFTAVDSG
                     KVDISVNNFDMTEARKEKYNFSIPYKYSVGGYIVREDGSSGIEAADLSDWTGKKAGGG
                     AGTQYMKIAEKQGAEPVIYDNVTNDVYLRDVSTGRTDFIPNDYYTQVMAIKWVNANFP
                     DIKVKMGDAKYNPTEQGIVMSKADTSLKEKIDEALEAMKADGTLKAISEKYYAGQDLT
                     IPVENADELPVIEVE"
     gene            19212..19883
                     /locus_tag="AC1PJC_000645"
     CDS             19212..19883
                     /locus_tag="AC1PJC_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HIP6619667.1"
                     /translation="MDINWQAVFNADIAREAIPQILEGLPYTLSLSLIGFALGTFCGF
                     FVALMRMSKFGPLRWLAMAHISLMRGIPLMVLLFFIYFGLPFMGLQLDAISASIIAFT
                     SMSSAYISEIIRASLSAIDKGQWEAARSLGLRTNVIYRKIIIPQAFRIALPPLSNVLL
                     DMVKSTSLTAMITVPEIFNKAKIVGGAKSDYMTVYICVALIYWVICTLYAFGQLQLEK
                     RLATY"
     gene            complement(20008..20217)
                     /locus_tag="AC1PJC_000646"
     CDS             complement(20008..20217)
                     /locus_tag="AC1PJC_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIP6619668.1"
                     /translation="MEMIRVNLDKVLKDRQMTSKDLAEQVGITEANLSILKTGKAKGI
                     RFNTLMSICRILDCQPGDILEYVKE"
     gene            complement(20219..20743)
                     /locus_tag="AC1PJC_000647"
     CDS             complement(20219..20743)
                     /locus_tag="AC1PJC_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619669.1"
                     /translation="MKTNLLKIAGLLAGCVRYFFYLLIAGYIFFSLAGLGGDSFAIGS
                     WEYTFNKPIDQISVWLILLTSGLILIILAVLSHIAHLIQKLCKLLLEEDYFASASLEL
                     YQKLFISLLVLTAGQFCLTSLIALTNAAGPNNFLNLRWSDFILNALFIFLTYFVWTLV
                     QKGQQLETENSEFI"
     gene            complement(20878..22746)
                     /locus_tag="AC1PJC_000648"
     CDS             complement(20878..22746)
                     /locus_tag="AC1PJC_000648"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011528775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015662 - P-type ion transporter activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HIP6619670.1"
                     /translation="MTLVTNLKQHSHIITTALCLALILIGILLFQTEQGWAPILFISA
                     FIIGGYQSAKEGLTELFVDKHLSVDLLMILAAIGSGLIGYWMEGALLIFIFSLSSTLE
                     ELAMEKSKNAIAALMNMTPPTARKIEENGDITVLDTAAIRIGDLLQVRKGDTVPLDAT
                     LISPQSIFDESMITGEPLPAEKMAGAAVIGGTINQGPTVTVQVTAEKGDALFDKIVQM
                     VENAQESKSKTATFIENMEDTYVKVVLVVVPLFILFAHFALGWDWLTAFYRGMILLTI
                     ASPCALVASSSPATLSAISRAARKGMIIKGGDIADNIANLEAIVFDKTGTLTIGKPEV
                     VGVTYLGDEELIKQVVQAVEKQSSHPIAQALMTYTADSSAIDLQSLEDVTGKGLVARY
                     EGDSWKIGKAGFVVDSLVSPLSASLLAQIDEAESTGKTLVYVSQNDMLAAIFMVEDSL
                     KPESKQLIAQLKEMGVTPILLTGDQEKTARYVASQVGIARVIANCLPTDKAAVIQKLQ
                     TEFASVGMVGDGINDAPALAQANVSYAMGSGTDIAMESADIVLMEDLTRIPYSIRLSK
                     KMRGIIKQNIIFALSVIALLIISNLFQSINLPLGVVGHEGSTILVILNGLRLLYFK"
     gene            complement(22908..23363)
                     /locus_tag="AC1PJC_000649"
     CDS             complement(22908..23363)
                     /locus_tag="AC1PJC_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HIP6619671.1"
                     /translation="MELHSHLNAENQTAFEHVIQHLKEKGVRITETRKAVVAYIIESD
                     DHPSAEMIYQDLLPNYPNMSLATVYNNLKLLLEEGFVTELKRTNDNTTYYDFMGHEHL
                     NVICEVCGKITDFMDVEIPSLKKEAHTQTGYKITKEVLSIYGICPDCQG"
     gene            23530..24279
                     /gene="truA"
                     /locus_tag="AC1PJC_000650"
     CDS             23530..24279
                     /gene="truA"
                     /locus_tag="AC1PJC_000650"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011999919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HIP6619672.1"
                     /translation="MTRYKAIISYDGHDFSGFQRQPHARTVQEEIEKTLVRLNSGQPV
                     TVHGAGRTDAGVHAYGQVIHFDLAGSRDTEKLRFALDTQTPEDIDVVSVEQVADDFHC
                     RYAKHSKTYEFLVDIGRPKNPMMRHYATFYPYDLDLSLIEEAIQDLVGTHDFTGFTAS
                     GTSVEDKVRTITAASMEYDQRRQFLIFTFSGNGFLYKQVRNMVGTLLKIGNGRMPVGQ
                     IKRILAEKDRGLAGPTAAGNGLYLKEIIYED"
     gene            24269..25030
                     /locus_tag="AC1PJC_000651"
     CDS             24269..25030
                     /locus_tag="AC1PJC_000651"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004184219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HIP6619673.1"
                     /translation="MKTKYILALSGNDIFSGGGLHADLTTYAVHKLHGFVAVTCLTAM
                     TEKGFEVIPTETAVFAQQLASLKDVPFSAIKIGLLPTVEIAEQALAFVKAHQEIPVVL
                     DPVLVCKETHDTEVSQLRDEFLKFLPHVSITTPNLAEAQLLLQKDIKTVEEMKQAAVA
                     LHDLGAKAVVIKGGNRLGNQQAVDVFYDGQEVVVLQSPLLSENNVGAGCTFASSIASQ
                     LLLGREPFEAVRLSKDFVHAAIEKSDDYGVIQYEK"
     gene            25020..25505
                     /locus_tag="AC1PJC_000652"
     CDS             25020..25505
                     /locus_tag="AC1PJC_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HIP6619674.1"
                     /translation="MRNKKTQELVLLAILTALSLVLAFVYVPTATGFVTLLDVGVYFT
                     AFYLGKKEGAIVGGLAGLLIDFLLGYPQWAFFSLVFHGAQGYFAGWTGKKRILGLVLA
                     TLSMVGGYYLASRIYFNDLKAIESVLSNTLQNTVGLVVGYILAQAIERIGAVNHVIKG
                     N"
     gene            25486..26052
                     /locus_tag="AC1PJC_000653"
     CDS             25486..26052
                     /locus_tag="AC1PJC_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01440 family protein"
                     /protein_id="HIP6619675.1"
                     /translation="MSLKEIKDQTKQVVQEVLELSNLQKGQIFVLGLSSSEVIGGHIG
                     KNSSLEVGEVVVETILEILEPKGIYLAVQGCEHLNRALVVERELAIQKDLEMVNVLPT
                     LHAGGSGQLAAFKYMEAPVEVEFITAQAGVDIGDTAIGMHIKHVQVPIRPSLREIGQA
                     HVTALASRPKLIGGVRAAYQEDEIRKGS"
     gene            26052..26666
                     /locus_tag="AC1PJC_000654"
     CDS             26052..26666
                     /locus_tag="AC1PJC_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1349 domain-containing protein"
                     /protein_id="HIP6619676.1"
                     /translation="MKEFTVKDLVWTRPPRQFTISDEEITITTEPKTDLWQKTYYHFV
                     NDNAPVLQMETEEDYFSFAVKTDFAGSHTRFDQCGIVLYQDSENWLKCSIEYENDDFQ
                     HLGSVVTNHGFSDWATTEISSQVKSMWFRLSRRGADYCFENSEDGIHFKQMRVCHFHQ
                     GAGKIAFGLYACSPENSSFTARFTNMELSDCKWLPHDGQEPDEI"
     gene            26938..27702
                     /locus_tag="AC1PJC_000655"
     CDS             26938..27702
                     /locus_tag="AC1PJC_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619677.1"
                     /translation="MTKGYQQRFSLSILLWMRQDKARQEGMDYWSGGHAQIIAASPGL
                     LEYRQQHLSKTEHSFWPKVTGLETAIPEDRRIDGIAEVTYQKLLAPIGGRRQTALAFE
                     DEVNVFRRTLMHMGFPYSSRWYHTSTQTQTQLRDVLYFRRKDGVKSSSFKKFVQDGLA
                     SQLATISGVTEVRTQVYLPWNKATWNTPNVAHDNPKEDHLHASIILGFADQVAREVFY
                     ANLAPQLNAEVVQYSSAVHAYHIEKTLPFVLDGKRM"
     gene            27824..28255
                     /locus_tag="AC1PJC_000656"
     CDS             27824..28255
                     /locus_tag="AC1PJC_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HIP6619678.1"
                     /translation="MDTKFSVALHILTMISESKEILSSQALAESVGTNASYIRKVIAL
                     LKNAGLITSHQGRSGYQLSKSPKDISLLEIYLATQEVEHIRLFQIHQNANLSCPVGQH
                     IEGAMVPIFSSVEQELEHQLSRQSLENVIDNLYQSAQETRI"
     gene            28335..29336
                     /locus_tag="AC1PJC_000657"
     CDS             28335..29336
                     /locus_tag="AC1PJC_000657"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HIP6619679.1"
                     /translation="MKAAQHTSYNKNKITLNLTEIAKPTIQANQVLVKVTAAGVNPLD
                     NMISRGDVKLIVPYKLPQTAGNEVVGLVEEVGATVTNFAAGDRVFGRLPLDSIGAFAE
                     YVAVDAQALAKVPAYLTDEEAAAVPLTALTIMQALDLMGAQAGKTIFISGGTGGVGGM
                     AIPIAKAKGLTVITNGDGASGERVLKLGADRFIDYKTEDYTKTLSNVDYVLDTLGGAE
                     TEKQMSIMKKGGQLVSLRAMPNGEFAKRMNLPKWKQILFGLAGRSFDKMAKKYGVHYH
                     FIFVESNGRQLQEVADIFSKLEIKPSIDTVYPFEEVNAALDKVANGRSRGKTVLSFN"
     gene            29363..30209
                     /locus_tag="AC1PJC_000658"
                     /pseudo
     CDS             29363..30209
                     /locus_tag="AC1PJC_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636563.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
     gene            30202..31071
                     /locus_tag="AC1PJC_000659"
     CDS             30202..31071
                     /locus_tag="AC1PJC_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HIP6619680.1"
                     /translation="MPKTILITGSTDGIGKHLAMKLASEGHEVILHGRNSEKLRVALS
                     DIQLKTGNKKIHGYLADFSKLADVYRFSQEIKRDFEQIDVLLNNAGAYFGDARVATAE
                     NIEMTFMLSVQVPYILTMELLPLLEKAGGRVIHTSSFMHHFAQTRGLDFGLEQSYSAA
                     MAYNNAKLYTIWLAIAQAEVLEKQGSSVTVNAYHPGLIATNLGNDGGKRNLRSRILTS
                     LMKPFSKDLDQGIETGYYLSLSPEVAGVSGRYFAEKRLAKVSLKGFDLAKSQALLAYL
                     DKKIQVFKESYGD"
     gene            31064..32275
                     /locus_tag="AC1PJC_000660"
     CDS             31064..32275
                     /locus_tag="AC1PJC_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase family
                     protein"
                     /protein_id="HIP6619681.1"
                     /translation="MTKILLENLQLPNGQVLDNRFFKSAMSETLADSQGAPSDDLIAL
                     YDYWAKQGMGVLVTGNVMVDGRYLGEPGNVVLDSDDHLTQFRKWAAIGKKNGVPIWLQ
                     PNHPGKQMYRSINQTPIAPSAIPISGSSASAFRPPREMTVFDIKEARDKFIAAGLRAK
                     AAGFTGVQLHAAHGYLINQFLSPADNQRTDRYGGSLDNRMRFLVEVYQGLREKVGPDF
                     TIALKLNASDFKEEGFGFEDCKHVVKTMSDLGIDLIEISGGNYETPVFGSEYENGAGF
                     VTYALALADLTSVPIVSTGGFRKITQMEEAIKDGVSMIGLARPFVLRPSLVSDYRQVG
                     DLQLTTPRLTTGLPKLDKALGPIIGVSYYEAQMKRLAKGKSVTVSQHAWPYLLQTIKA
                     HGLSALKPRRK"
     gene            32430..32678
                     /locus_tag="AC1PJC_000661"
     CDS             32430..32678
                     /locus_tag="AC1PJC_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619682.1"
                     /translation="MSFLEANEKIAEKVVGAHKAIEKTVVGGYKATKNVAVSGFNTIS
                     DKFIGAFFTKDNETVEEAKARMSKMDFNQPNSSKGDDK"
     gene            32734..33102
                     /locus_tag="AC1PJC_000662"
     CDS             32734..33102
                     /locus_tag="AC1PJC_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009854296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619683.1"
                     /translation="MKKRDFISLIAYTVSLLVLALGMCFYTLPEWEMTTLGMPLSVAG
                     LLLLALSWVLQRKLAGKGAPKFDWKQIVKVIYCVFALLVFGGGFALVTTGNFVLGLIL
                     GLVGLILVIGMIPVTVGLKN"
BASE COUNT         9315 a         6983 c         8146 g         8805 t
ORIGIN      
        1 cggatacaac tgatgtcgtt cgtgacggtg aagtaggttc aacttatgaa acaagcgtag
       61 gcaactttga aggctataca tttgttaaag ttgatgaaaa aggtgcaaca ccaacaggtg
      121 aagttgaaga aggcgagaag actgtagttt acatctacac taaagttgaa acgccggttg
      181 ctaagacagg tagcgtcctt gttcgtcaca tcactgataa aggtgaggtt cttgcggata
      241 caactgatgt cgttcgtgac ggtgaagtag gttcaactta tgaaacaagc gtaggcaact
      301 ttgaaggtta tacatttgtt aaagttgatg aaaaaggtgc aacaccaaca ggcgaagttg
      361 aagaaggcga gaagactgta gtttacatct acactaaagt tgaaacacca gttgttaaga
      421 caggttcagt tgtagctcgt tacgttatcg aaggaacaga agatgaaatc gcagatgata
      481 aatcagttaa accgaccgat acaccagttg atgagccata cggtgataca ccaccagcta
      541 caattacaaa agatggcaag acttacgaac ttgttcgtac acgtacaaac gaaggtgatg
      601 caccaagcaa cggtacagtt gtagaaggtg aacaaactat cacttacgag tacaaagaga
      661 aagtcgaaac accagttgtt ccaccagttg ttgaaaaaca aggtaaagtt atcgttcatt
      721 atgttgatga aaagggtaat gttattaaga caccagtagt tgatactgag aacggtacag
      781 tgggcggaga ctacgatact tcagacaacc gtccaaaagt gattgtattc aatggaaaac
      841 gttacattct tgtagaatct cgtattccaa ataattcaaa aggtaaagta gttgaaggtg
      901 aaactcatgt aacttacgtt tataagcaag aaaatgagga gccaacaaca cctacaacac
      961 ctaaccaacc aacaactccg tcaactacac cggtgactga gacagcaaaa gtaacaccta
     1021 agacaagcgc aatcttgcca gaaacaggtg aaagcacatc tgtacttgca ttggtaggtt
     1081 tagctttgtt gggtacagtt gcagtggcgt cacgtcgtcg caaagcaaaa taataggctt
     1141 tggttagtag cccaaagaga aaaatcagaa gttcagttgg acagtttcct gtcaagtgaa
     1201 caatgaaatt gtaaaaaatt aagcaacgac cttgttcctc ttgaaatgaa gaacaaggtc
     1261 gttgtttctc ttttaaatat cgatgagtgt aaaattggat gttctctatc aatcttgttc
     1321 aggtattgct atccatcaag ccaatattgt tgtctgtatc ctaaacggac ctctcacctc
     1381 aactcatcca aagcgtgaga tggttacgtt tgatacaaca actaaggggc tatgcgcttg
     1441 ccgcgatttt cttggtcaat ttcatgtgga agcagttggt atggaaagta tgggagtcta
     1501 ttagcgccct gtctggtatg ctctatgtga tgacttcgag ccaatacgcg ttcaatcagc
     1561 atctggtcca gcaggtcaga gagcagagct tcgcaggcta tgtccagcag gaattttact
     1621 cggccattcc aagcggtttc ttcttggtag aagacattgc ccaccgactg gtgtcagcgt
     1681 gcgcccctgc aacgcaacct gtcggctgaa aataccagct ttaaacagga actgcaagcc
     1741 gttcaaaaag accatgacct tctcctacct caagatgaaa ttaccagcag aggagatttc
     1801 cagcctgatt ggctacagcg aggtcaacgc cttcagccat gccacaaaaa caggataggc
     1861 gtgactgtga cagattataa gaagcaacaa gggctataaa cacgtatgat agaggtagaa
     1921 tctagatgat ttctaccttt ttctgtctat ttatgataaa ataaatgaaa atttagaaga
     1981 ggtgttcaga tgaaagctat tgttacagtt gtcggtaagg ataagtcagg aattgttgcg
     2041 ggtgttgcga ccaagattgc ggagttgggg cttaatattg atgatatttc ccagacggtt
     2101 ttggatgagt attttaccat gatggcggtg gtgtcgtcag atgagaagaa agatttcacc
     2161 aagcttcgtg cagaactaga agcctacggt caggctttga atgtgaaaat caacattcaa
     2221 agtgcggcga tttttgatgc tatgcacaac ttgtaaggag agatttcatg gatattagac
     2281 aggttagaga aaccattgag atgatcgagg agcagcactt cgatattcgg actatcacca
     2341 tggggatttc cctcttggac tgtatcgact cggatatcga caaggctgcg gagaaagtgt
     2401 ataccaagat tgtcaccaag gctaagaact tggtagccgt cggtgatgag attgcggcgg
     2461 agttggggat tcctattgtt aacaaacggg tatcggtgac gcctattgct ttgattggtg
     2521 cggcgacgga tgcgacggat taccttcccc tagctcatgc cttggacaag gcggctcatg
     2581 agatcggcat cgattttatc ggtggttttt cagctcttgc tcaaaagggc taccaaaaag
     2641 gtgatgaaat cctcatcaac tctattccgc aggcattggc ccaaacctct aaggtctgct
     2701 cgtcagtcaa tatcggctcg accaagacgg gtatcaatat gacggctgtg cgggacatgg
     2761 ggcggatcat caaggagacg gcggaggctt ctgatatggg ggcggctaaa cttgtagtct
     2821 ttgccaatgc ggtcgaggac aatcccttca tggcgggtgc cttccatggt gtcggtgagg
     2881 cggatgtggt catcaacgtc ggcgtatctg gaccaggtgt ggtcaagcgt gcccttgaaa
     2941 aagtgcgtgg tgagagcttt gatgtggtgg cggagaccgt caagaagacg gctttcaaga
     3001 ttacccgtat cggtcagttg gtcggcaata tggccagcga acgcctgggt gtcaagttcg
     3061 gtatcgtgga cctgtcgctt gctccaacgc cagcggttgg cgactcagtg gcacgggttt
     3121 tggaggaaat gggcttggaa accgtaggta cgcacggaac gactgctgcc cttgctttgc
     3181 tcaatgacgc agtgaaaaag ggtggagtca tggcctgcaa ccaagttggc ggtttgtcag
     3241 gggcctttat ccctgtgtct gaggacgaag gcatgattgc ggcggtgcaa aatggctcac
     3301 ttaaccttga aaaattggaa gctatgacgg ctatctgttc tgttggtttg gacatgattg
     3361 ccattccaga aacaacacct gctgaaacca ttgctgctat gattgcggat gaggcggcga
     3421 ttggggttat caaccagaaa acgactgcgg tccgcattat tccgcttgga aaagaagggg
     3481 acatgatcga atttggtggc cttctgggaa cagctcctgt tatgaaggtc aatcaagctt
     3541 cgtctgtgga ctttatcaat cgtggtggac aaattccagc accgattcat agctttaaga
     3601 actaaaaaac gtagaccgat tgccacaagc agtcggtttt ttgttatact aatagtaaga
     3661 aatgacaagg agaaaaacga atggcagatg taagattata tatttctcgt cacgggaaaa
     3721 ccatgtttaa taccattggg cgcgtgcagg gctggtgtga tacgccgctg accaaggctg
     3781 gtgaggaagg aattcgtgaa ctgggcttgg ggctaaagga tgcgggtctt gaatttaaac
     3841 tagccgtgtc cagtgacctg ggtcgaaccg ttcagaccat gaccatcgcc cagcgtgagt
     3901 tgggaatttt gggaaaaatt ccttattacc aagacaagcg tatccgtgaa tggtgtttcg
     3961 gtagttttga gggcatgtat gatgctgagc ttttccaagg tgtcctgcct cgtttgaaag
     4021 ggacagtcga tgcgacaggc atgtcctttg cggaaatcgc agcaggtatc caagaggcag
     4081 acacagctgg ctgggcagaa tcttgggagg tcttgagcaa tcgtatctta acaggttttg
     4141 aatccatcgc ccaagacttg gaaaaacaag gcggaggcaa tgcccttgtg gtcagccacg
     4201 gtatgactat tgcaaccctg gctcatctgt tggagccaga gcgtggtgcc aatgtctttc
     4261 tcgataacgg ctcaatcacc gtcctcaaat acgaaaatgg caagctttta attgaagcag
     4321 ttggcgacct atcctaccgc aaatgtgggg cagagttgat tgcccaaggg aaataaagat
     4381 atgaaatcag ggagtattct ctgatttttt tgattgaagt agggaagtaa ctaggtcctc
     4441 agactgattt ttagcactct aagcaaaaga gtgctaattt tttgtctttt tctcttgaca
     4501 atccatttta tcggcgtata atgggagtat aaagtttagc actcgaaagg catgagtgct
     4561 aaatacacga atcaacagtg ttcttgaaag gagcgaagat gattacccaa cgtcaaaatg
     4621 atattttgaa tctgattgtt gaattattta cgcgccatca tgagccagtt ggttctaaga
     4681 ccttgcagga aatgattgct tcaagttcgg ctaccattcg caatgacatg gctaagctgg
     4741 agcagttggg cttgctagaa aaggctcaca cttcaagcgg tcggatgccc agtcgggctg
     4801 gttttcaata ctttgtcaac cactcgctca atctggaaca catcaatgaa gaagatgttt
     4861 atcaggtggt caaggccttc gactttgaag ccttcaagct ggaagacatc ttggagcggg
     4921 ccagtacagt cctagcggat ttgactggct acacttcggt catcttagat gtggagccga
     4981 ccagtcagca gttgacttcc tttgacatcg tgcaactcag cagccacgat gccttagcag
     5041 tcttgacttt agaccagtcc aaaccagtca ccgtccagtt tgccattccc aagaacttta
     5101 tgaccaggga cttggaggtg ctcaaacgct tggtggatga acgcttcgtt gaccagacag
     5161 tcttgtccat tcactacaag ctgcggacgg agattcccca ggtggtgcag cgttacttta
     5221 ccacgacgga caatgtcttg gatttgatgg attatatctt ttccaatctt ttccaagaat
     5281 cagtcttcat cagtggaaag gtcgcatctc tgacttacgg caatctagct acctatcagc
     5341 tcttggatag cgcacagcta ttagcaccag agttgcggca gggcttggct cccgctcagc
     5401 agaccagcat ttccgtggca gaacataggg atcctgccct agcagatgtg acagtcattc
     5461 atcatcgctt tccaatcccc tatcggggca tggctcagat gagtttgctt ggtcctgttg
     5521 atatggatta ccgcaggcag atgagtttaa tcaacatcat cagccgcgtc ctatttatga
     5581 aattaaccga ttactaccgt tatctaagta gtaatcatta cgaagtcaat tagaaggaga
     5641 atgctttgtc agaagaaatc aaaaacgaag aaatcgtaga agaggttgaa gcaacagaag
     5701 aagttgtgga aacgcctgaa aaatcagagt tggacttggc aaatgagcgc gctgaggaat
     5761 ttgaaaacaa gtaccttcgt gcccacgctg aaatgcaaaa tatccaacgc cgtgcaaacg
     5821 aagaacgcca aaccattcag cgttaccgtt cgcaagactt ggctaagaaa atcttgccaa
     5881 gcttggataa cttagagcgt gcccttcaag ttgaaggctt gacagaagat gtcaaaaaag
     5941 gcttggaaat ggtacaagaa agcttgattc aagccctcaa agaagaaggg gtggaggaag
     6001 tcgcaaccga tgtctttgac ccaaatcttc acatggccat tcaaacagtt ccagccacag
     6061 acgactgccc agcagaacac attgcacaag tcttccaaaa aggctacaag ttgcatgaac
     6121 gcttgctgag accggctatg gtggtggtat cagaataaat gatagagcta cgcgaaatta
     6181 gcgatgaaaa tttttacgat tgcttacata tttattctgg tatatctaaa gaagattatg
     6241 tcgattcagt tgagttttca ttggcagagg cttggagtct ccgaccgttc tcgcatccaa
     6301 aagccattta caatgggatg gatttgatag gctatgtttc gctttactgc aaagacagaa
     6361 atggtgaaat aatcaatttt gtaattgata agcaacatca aggaaaagga cttgggagaa
     6421 aagcagtaga agtctgtata gactatctgc aaacagagca cagcgtcact caagtttcgc
     6481 taccagttca tgaaaaacat ttggaagcta gaaaattttg gaagaagtta ggctttcaag
     6541 aatcaaataa cattgaagat gattatatct tcatgcgccg aacactctga ccgaaatatc
     6601 gtgcacagta gtttgcaacc aatcgcttcg tcgcgaggct cctagctctt gggcaaactt
     6661 tgtgtcggta actctaaggt cgctaaagcg acaagagtta ctcgaaaact atgaaaaaac
     6721 ctcgtctgca atgacggtaa actatgaatg aataaaagaa aactaaagta agaggtaaca
     6781 cacatgtcta aaattatcgg tattgactta ggtacaacaa actcagcagt tgcagttctt
     6841 gaaggaactg aatccaaaat cattgcaaac ccagaaggaa accgcacaac tccgtctgtt
     6901 gtatctttca aaaatggtga aatcatcgtt ggtgacgcgg caaaacgcca agcagtaact
     6961 aacccagata ctatcatctc tatcaaatca aaaatgggaa cttctgaaaa agtttcagca
     7021 aacggcaaag agtacacacc acaagaaatc tcagctatga ttcttcaata cttgaaaggc
     7081 tacgctgaag agtaccttgg tgaaaaagta actaaagccg ttatcactgt tcctgcttac
     7141 ttcaacgatg cacagcgtca agcaaccaaa gacgctggta aaatcgctgg tcttgaagta
     7201 gaacgtattg tcaacgaacc aactgcagca gcccttgctt acggtttgga caagactgac
     7261 aaagacgaga aaatcttggt gttcgacctt ggtggaggta ctttcgacgt atctatcctt
     7321 gaacttggtg acggtgtctt cgacgtactt gcaacagcag gtgataacaa gctcggtggt
     7381 gacgactttg accaaaagat tatcgaccac atggtagcag aattcaagaa agaaaatggc
     7441 atcgacttgt cagctgacaa gatggccctt caacgtttga aagatgcggc tgaaaaagcg
     7501 aagaaagacc tttctggtgt aacatcaact caaatcagct tgccgttcat cactgcaggt
     7561 gcggcaggtc cgcttcactt ggaaatgaca ttgactcgtg caaaatttga cgaattgact
     7621 tacgaccttg tagaacgtac aaaaattcct gttcgtcaag ctctttcaga tgcaggtctc
     7681 agcttgtcag aaatcgacga agtcatcctt gttggtggtt ctactcgtat cccagccgtt
     7741 gtggaagctg taaaagctga aactggtaaa gagccaaaca aatctgtaaa ccctgatgaa
     7801 gtcgttgcta tgggtgcggc aatccaaggt ggtgtcatca ctggtgatgt gaaagacgtc
     7861 gttcttcttg atgtaacgcc attgtcactt ggtatcgaaa caatgggtgg tgtctttaca
     7921 aaactcatcg accgcaacac aacgatccca acttctaaat cacaagtctt ctcaactgcg
     7981 gcagacaacc agccagctgt tgacatccac gtgcttcaag gtgagcgtcc aatggcagcg
     8041 gacaacaaga ctcttggtcg cttccaattg actgacatcc ctgcagcacc tcgtggtatt
     8101 ccacaaatcg aagtaacatt tgacatcgac aagaacggta ttgtttctgt aaaagccaaa
     8161 gaccttggta cgcaaaaaga gcaaaccatc gttatccagt ctaactcagg tttgactgac
     8221 gaagaaatcg accgcatgat gaaagatgca gaagcaaacg ctgaagcaga caagaaacgt
     8281 aaggaagaag tggaccttcg taacgatgtt gaccaagcaa tctttgcgac agagaaaact
     8341 ctgaaagaaa ctgaaggcaa aggcttcgac gcagaacgcg atcaagccca agcagcactt
     8401 gacgagttga aagcagccca agaagctaac aacttggatg acatgaaggc taaacttgaa
     8461 aacctcaacg aaaaagctca agcccttgca gtgaaactct acgagcaagc cgcagcagca
     8521 caacaagcag ccgcaggcca agaaggtgct caaacggcta acaacgcagg cgatgatgtg
     8581 gtggatggcg agtttactga aaaataagat gtgagagcgt taaaagaacg acagaaaaat
     8641 aggaacttga cgctgaatgc ttgcattcaa ggaaagttat cttttttccg aagttcttag
     8701 ctcgaactca gttctcatct tctcgagaat agaaatgaga aacgagcggt tggactggga
     8761 gaccttttta tcctgacttc ttgaaaatta gtaggaagtc tgttaaggtt cttagttcga
     8821 actcaattct tatcttcctg agaatagaaa tcattcgtca ataaaatttc caatcacaga
     8881 ggttgcaacc cagcctctgt ttttgggtaa atacccttct aacttttaca gaaaggaaag
     8941 tgttcgtaac tgaacacggg ctactttcta attttcaaag aaaggaatac aagttcgttt
     9001 attcgaacac aggctaaaaa cctagtgaaa aagataaacc tcctagtgtg ttttacacac
     9061 tacgtcagtt tcctattttc acttttccaa aactatgata gaaaggaaag tgttcgtaat
     9121 cgaacacggg ctacggactg tgccaaaaag atagtttttc ctaggacggt gaggtcctgc
     9181 gtcaaaactc ctattttggc tgtgtccgct ttacgccctt agtatcttat atgaacaata
     9241 ctgaatttta cgatcgtctt ggtgtttcta agaatgcttc gccagacgag attaagaagg
     9301 cttatcggaa gctttcaaag aaataccatc cagatattaa taaggatccg ggtgcggagg
     9361 ataaatacaa ggaggtccag gaggcttatg aaaccttgag tgaccctcaa aaacggtctg
     9421 cctatgacca gtatggtcct gctggtgcca atggaggttt cggcggagga gcaggtggat
     9481 ttggtggttt cgacggagca ggtttcggtg gctttgaaga cattttctct agcttctttg
     9541 gtggaggtgg tgcgacgcgc aatcctaatg cacctcgtca aggggatgat ttgcagtatg
     9601 cggtcaactt gaaatttgaa gaagcgattt ttggtgtgga acgtgaagtt tcctataacc
     9661 gtgaggcaac ttgtcgaacc tgtacaggtt caggtgccaa acctggaaca agtccggtaa
     9721 cctgtgggcg ttgtcatggt tctggagtga tcaatgtgga cacccaaact ccacttggaa
     9781 ccatgcgtcg tcaaatgacc tgtgatgtct gtcatggtcg cggaaaacaa attaaagatc
     9841 catgtacaac ctgtcatgga actggtcatg aaaaacaagc ccatacggta acggttaagg
     9901 tgccagctgg tgttgagact ggtcaacgta ttcgcttggc aggtcaaggt gaagctggtt
     9961 tcaatggagg tccatacgga gatctctacg ttgtcattca ggtccaacct tcagacaagt
    10021 ttgaacgtga aggaaccact attcactata aactgaacct caactttgtc caagcagcac
    10081 ttggagatac agttcatgtg ccaacagttc acggtgatgt ggatatggtc attcctgaag
    10141 gtacccagac tggtaagacc ttccgactca aaggaaaagg tgcaccaagt gttcgtggtg
    10201 gagctattgg tgatcaatat gtcacagtaa atatcgtcac tccgacaggt ttgaatgacc
    10261 gccaaaaagc agctcttaaa gaatttgcgg cagctggaaa tattgatgtc aaaccccata
    10321 aaaaaggatt ttttgacaag gtaaaagatg cctttgagga tttataattc taagatgaga
    10381 ctggaaactc cagtctcctt tctttttcag aaaaaactct gggcatttcc tccgacgcat
    10441 cacaggctct gtgttaaaat aagatatagt aatttgaaag agaacgctta cgaatgaaat
    10501 cttgggttga gaatgtgacc ataaagaaat acgaagatcg gtctggtttg acgggtttga
    10561 aacaggggcc actggtgtgg actgaggtct ttttgcgcga ggtcaatcgt cagtccaata
    10621 cagggatttt acatttttgg cccatggacc aaacggtcat tctggggatg atggacagtc
    10681 aggttgccca gctggacaag ggcttagcca gtattggtca ggcaggctac agtcctatta
    10741 ttcggagttt gggcggtttg gcagtcgttg cggatgacgg gattttaaat gtcactctga
    10801 ttttgcccaa tccttctggt cacaaggttg atttgcggga gtcttatcag gtcatggtgg
    10861 atttgattgc ccaggcactt tcagattttc cctttgagat tgtcagtggt gaagtggcaa
    10921 cttcctactg tccagggacc tacgacctta gtatcaaggg gcggaagttt gcaggtttgg
    10981 cccagcggat ttaccaagag gctattgcca tttctgccta tatcagtgtg tcaggtaatc
    11041 aagtcaaacg tgggcaagtg gtggcggatt tttatgcagc aagttttgct ccgcaagaag
    11101 tatcgggcag atttccgcaa gtaaatccgg attcgatggc caatctgtca gacttggtct
    11161 gtcaggcttt gacggtggag gatatgaaga cacgaatcga gcgtgtcttg attgaaaacg
    11221 gggctttttt gtccaccttt tatccctcgt cggataacat gactgatttt atggcgctcg
    11281 gaaagaccat caagcagtct atggaaaaat atggtatcta ggaggaaata tggaaaccta
    11341 tcaagcatta tttgaagctc tgccattgca ccaaaccgtc ctagccaatc gttttgtcct
    11401 gtcgcccatg gtaaccaact cctccacagc ggatggcttg gtgacccagg aagatttgag
    11461 ctatgcggag cggcgggcgg atgcggctcc actacaaatc acaggtgcgg cttatgtgga
    11521 ccccaagggg caattgttcg agtttggctt tagtgtggcc aaggatgagg atgttgatgg
    11581 tttgcgaaaa ctggcccagg tcatgcagtc caagggggca aaggcaatct tgcagctgac
    11641 ccatgctggt cgtttttcca gccacaccct tcagcgggac aaactggtct atggtcccag
    11701 tcccatgaaa ctccatgctc cctttcccca tgaggtcaag gagctgacca tagcagagct
    11761 ggaagagctg gttgaggcct atgggcaggc gacgcggcga gctattgagg cgggttttgc
    11821 aggagtagag atttcttctg cccagcgttt gctgattcag accttctttt cgactttttc
    11881 caatcagcgt caggaccgtt atggctgtca aaacttggaa aatcgttccc gttttggttt
    11941 agaagtcttg cggaaggttc aggaagtgat tgaccagttg gcgccagctg actttatcct
    12001 cggctttcgg gcaacgcctg aagaaacaag aggagccagt atcggctatt ctatcgagga
    12061 atttttacag tttatggatt tggctttgga ggttgcaagg attgactacc tagccatcgc
    12121 ttcatggggg catgatgtct ttcgcaatca ggttcgagga gctgggcgtc atcaggggcg
    12181 cttggtcaat caggtggttc atgatgcctt aaaggatagg ctggtggtta tggcgacagg
    12241 gggtatcaat tcggcggaga aggctattga ggccttggag catgcggata tggttggtct
    12301 gtcaacacct tttatcaccg atcctgagtt tgctcacaag atcgcggccg acaaaccaga
    12361 agacatccaa ctgcggatca agccagaaga cctgtccaag ctggctattc cccaggcttc
    12421 tttcaaggat attgttccct tgatggacta tggggagtcg ttgccgaggg aatcgcgaga
    12481 ggttttccgt agtctttact cttcgaaaat taaacccaga cgttgttgac atgatttgat
    12541 gaacttgagt tctatcttca tcatcgtcgc ctagtctgac tttaattttc attgagtaaa
    12601 actaaaacat tacgaggagg aagggtatga aaattagtct tttggactat gggcttttgg
    12661 atgaggggcg gacctaccag gaggcctggc aggatagttt ggcgctggtg caggcggcgg
    12721 atcgcttggg ctaccatcgg ttttggttgg cggagcacca caatgtccat gccctgacca
    12781 tcggcagtcc cgaggtcatg attccttact tgaccagtca gactcagcgg attcatctgg
    12841 gttcgggcgg catcatgggc ttgcattatt cgccttataa aatagcagag ctggcagcca
    12901 gtctggaaac tctttttcca ggtcgggtgg acatcggctt gggaaattct actggaacgg
    12961 ctctggttaa agagcacatg cgtagccagt ttcaacctag tcaatttgac caatgggtcc
    13021 agcagtttac aggctatctg acaggaaaag atgaagccat tagtctgtcg cccaagctgg
    13081 caagctaccc agaaatcttc accttgggga tgggtgggca gtccatggcc ttgtctgcta
    13141 aggagggctt gggctatgtc tttggtagct tcccttacat tccccatgat cctgtggaaa
    13201 cagctggaaa attggctcag gattaccgca gggactttca gccgtcagac gtcatggcgc
    13261 aaccgcattt tgccctggcc ctctttgtcg tgattgcgga aaccagtcag gaagcagaag
    13321 acttagcaaa atcgctagat atttggatgt tgggcaagca agattttaat gagtttagcc
    13381 attttccaag cctagccacc tatcaggcct atgagctgac ggagcaggat agggaaagaa
    13441 ttgcccagca ccgcagtcgg atgattatcg gcaatccagc agaagtcaag gagcaacttg
    13501 aaagactggt tgcagcttgt cagccagacg aactcctctt tatccccttg gtttcaggga
    13561 ttgataaccg cttgaaagcc atcgaattac tagcacaaat tgtagaaagt gagacactat
    13621 gaaaaaaatt gccaactacc tctgggtaga aaaagaagat gctatttaca ctatccgcat
    13681 gacagcagag ttgcaggatg atgtcggtac ccttggtttt gttatttttt ccgacaagga
    13741 agtcttggag gtcaatgatg agattctcaa tttagaagcc tcaaaaacag ttatggctat
    13801 cctgacccct attgcaggtc gggtggtaga gcgcaatacg gctgctctgg aacaaccaac
    13861 cctgctcaat tcggaaaaac cagaggaaaa ctggttgatt cgcttgaccg atgtgtctga
    13921 agaagccttt ttagcgcttg aagatgctta aggaagagat gctgggcttg ctgacggcta
    13981 tgattgaaat cttgcaggct gagaaaggtg agccccagtc ggcggagctt gaattggcta
    14041 gtcttgaaga ggctcttccg atttggagag gtttggtcaa tcaacggcca gcgggaccga
    14101 ttggggcgga ctatctggta gcggaggcgg cctttttagc cgcctatcat gaggaacata
    14161 ttcaggatgt gtcagtctgt cagccgacga gcgaccctca gatttttctc tatccaggag
    14221 atttgtgtca tttgcaggtt gatgcagtgg tcaacgcagc caatagtcag atgctgggct
    14281 gttttatccc caaccacgcc tgtctggaca atgccctcca tacctttgca ggtttggagt
    14341 tgcgccagtt ttgtgccaag aaaatggaag aacaaggtct tccagcagca gttggcaagg
    14401 tcatggtgac acctggtttt cacctaccag ctggtttggt gtttcacacg gtggggccct
    14461 ttatctcaga aggcaagcct gtttcaccta ttcgaaaagg acttttggag cagtgctacc
    14521 tgtcctgttt agaggaggcc aaggcgcgtg gtcttaaagc aatggccttt ccagctctat
    14581 caacagggga atttggctat cctaaggacc aggccgcaga agtggcagtt catactgtcc
    14641 gcaagtggct gacggaaacg gcttattctc tacagattat tttttcgacc tatacggtgg
    14701 aagaccaggg ctactatata gccttattag gagaaaagga ggatgtccat gtggcagacg
    14761 cttaaacaag aagaaaaaac tcaggcggag ctgcttgctg gcttgctggc tgaagctgat
    14821 gcggtggtgg tgggtattgg agcaggcatg tctgcggcgg atggctttac ctacatcggt
    14881 cctcgtttcg aagctgcctt tcctgatttc atcgccaagt acggcttttt ggatatgttg
    14941 caggccagcc tctttgactt tgaaagcacg gaggaatact gggactttca gagtcgcttt
    15001 gtcgccctta attatctgga ccagcctgtc ggtgattcct atattcattt gcgggagatt
    15061 ttagaaacca agccctatca tatcatcacc accaatgcag acaatgcctt ttgggtggcc
    15121 gactatgata aagataaggt tttccatatt caaggggaat acggtctctg gcaatgcagt
    15181 cgccattgcc atgaccagac ctatcgagat gatgccctca ttcgccgtat gatagcagag
    15241 caggaggata tgaagattcc ctatgacctg attccgcgtt gtccagtctg tgatgctcct
    15301 ttcgagatta acaaacgcaa tgcagaaaag ggcatggtcg aatcgccaga tttctttgct
    15361 caaaaagccc gctacgatgc ctttttagaa gaccatcaaa caggtaaggt cctctatctg
    15421 gaaatcggga ttggctttac cacgcctcag tttatcaaaa caccttttca aacaagagtt
    15481 cagcaaaatt ctcatgccct ctatgtctgt ctaaatcaaa aacattaccg tctgcctttg
    15541 cctattaggg gacgaagttt gaccctggca gaggacagtg cccaattatt aaaagaaacc
    15601 cataggattt attttaaagg agatacccca tgtacctaat cgaaccaatc cgcaacggtc
    15661 aatatgtcag cgatggagca gttgcactag ctatgcaggt ctatgttcaa caaaatgtct
    15721 tcttggatga cgacattctc ttcccttact attgtgaccc taaggtagag attggcaagt
    15781 tccaaaatgc cttggtcgaa atcaatgaag actacctcaa agagaacaat attctcttag
    15841 ttcgtcggga tacgggtggc ggtgccatct atgtggacaa ggggtctgtc aatgtctgct
    15901 acttgattca ggacaatgga attttcggag atttcaaacg tgcctaccag cctgctataa
    15961 aggccttgca tgagctagga gccgttgagg tagagcaaac aggacgaaat gacctggtga
    16021 ttgaagggaa aaaggtgtca ggtgcagcca tgaccatcag caacaatcgt gtttatggtg
    16081 gttactctct ccttttggat attgacgaag aagccatgtc caaggtcctc aatcccaaca
    16141 agaaaaagat tgaatcaaaa ggtatcaagt ctgtcaaaag ccgtgtgggt accatccgtc
    16201 cctatttggc agaagaatac cagtctgtca caacggagga atttaagaac ctcattacct
    16261 gcaagttact gggtattgac tccatcgacc aggcaaaacg ctatgtcttg actgaggaag
    16321 actgggcagc tattgacaaa ttggtggcag acaagtacaa gaactgggaa tggaactacg
    16381 gcaattcgcc acagtatagc taccaccgtg atggtcgttt tgctggggga actgtggata
    16441 ttcacctcga agttgaaaaa ggccgcattg ctaaatgccg tatttacgga gatttctttg
    16501 ccaagggcaa tattgacgaa gtcgaaaaca agctaatcgg cacacgtttg ctcgaagaag
    16561 accttcaggc agtcttggcg gatttggaca tggcgcatta ttttggtaag attagcgcgg
    16621 aagagttggt cggcttgatg ctgagcgaag gataagatag aaatagaggt tcctatggaa
    16681 tggaaagatg cgacagccat ggctcaggct gtcaatcaaa aacaggtttc tgccaaggaa
    16741 ttggtgcaag aaactattga caggattgaa aagctcaatc ccactctcaa tgcggttgtc
    16801 agcaagcagt atgaagaggc cttgaaagag gcggaaaaag aagactatct gggcaagcca
    16861 tttgcagggg ttcccttctt gctcaaggat ctggggcaaa atgaaaaagg tcaaccatct
    16921 tctgcaggtt ctcgcctgct tgctggtcga ccagcaggtc ataccgacac ctatgtccaa
    16981 cgcttgaagg acttgggttt catcattgtc ggtcgaacca acacgccaga attcggcttc
    17041 aaaaatatct cagatgccag cctgcacggt cctgtcaatc ttcccttgga ccccagtcgc
    17101 aatgctggtg gatcaagtgg tggtgcagct gcagcactgg cttcaggcat ggtctctatt
    17161 gctgcggcat cggatggtgg tggatctatt cgcatcccag cctccttcaa tggcttgatc
    17221 gggctcaaaa ccagtcgtgg tcggattcca gttggaccta agtcttatcg tggctggcag
    17281 ggagcatctg tcaattttgc cctgaccaag tctgtccgag acacccagcg tctgctctat
    17341 catttccagg attaccagct ggaagctcct tttccccttg ccaagctgag tgaagaggag
    17401 gtttttggaa aattgtctcg ccccctaaaa atcgcctact ataccaaatc tccagtaggg
    17461 agcaaggtca gttctgaagc ggtagaagcg gttcaaaaag cctgtcatca cttggcaaat
    17521 ttggggaatg aagtggtaga attatcagaa tatcctctgg atggagtggc cctgatgaaa
    17581 tccttctacc tgatgaacag cgtggacacg gcccagatgt ttgacgaaat cgaagcggct
    17641 tttgggcgcc agatgaccct ggatgacatg gaagtcatgt cctgggctat ttaccaaagc
    17701 gggcaaacca ttccagccaa attgcactcc aaggctctat tggactggga ccagtttgga
    17761 gccagcatgg cgcgtttcca tgaggaatac gacttgctcc tgacgccgac agtggctgat
    17821 gtagcgccta agcatgggca atttgaccta tcagcagatt tgctggaccg cctcaagcag
    17881 acccagaact attccatgga agagcagcag gaattgattt ggcaaatgtt cgaggacagc
    17941 ctagccctaa ctccctttac gcagcaggcc aatatttatg gtcagccagc catttctctc
    18001 ccgacttatg tgcgggctga cggattgcca attggtatcc aattgacagc agccaaggga
    18061 cgagaggatt tactcttgca gttggcagac caaatggagg cggcaagttt actctacttg
    18121 taagggaatt catttttcag ttcaattatt tgccaaaacg ttttcaaaat gttaacctgt
    18181 aaaagttggt gggttaacac cgaaaaagta aaaaggaagt tatgacttcc aaaggagatt
    18241 gttttatgtt gaaaaaagtt ttggcctcag ctctcttggt ttctactttg accttggcag
    18301 catgttctag ctcaagttcg aatactagca gttcttctgc tgaacagact caatgggaaa
    18361 aagtacaaga agcaggtgtc ttgaaggttg caacaccagg gacccttttc ccaacttctt
    18421 actacaacgg tgctaaagaa ttggtcggtt atgaaattga tatgatcaat gaaattggta
    18481 aacgtttgaa attggaaatc gaatatcaag aaatcggtgt agcagaagcc tttacagctg
    18541 tggacagtgg taaggtcgat atttctgtta acaactttga catgacagaa gcacgtaagg
    18601 aaaagtataa cttctctatc ccttacaagt attcagttgg cggctacatt gttcgtgaag
    18661 atggttcatc aggaatcgaa gcagctgact tgagcgactg gactggcaag aaagctggtg
    18721 gtggcgctgg tactcagtac atgaaaatcg ctgaaaagca aggtgcagag ccagttatct
    18781 atgacaatgt aaccaacgat gtctatttgc gtgatgtatc tacaggtcgt acagacttca
    18841 ttccaaacga ctactacaca caagtcatgg ccatcaaatg ggtaaatgcc aacttcccag
    18901 acatcaaagt gaagatgggt gatgcaaaat acaacccaac tgaacaaggt attgtcatga
    18961 gcaaggctga cacaagcttg aaagaaaaaa ttgacgaagc tcttgaagca atgaaagctg
    19021 acggaacttt gaaggcaatt tctgagaaat actatgcagg acaagatttg acaatccctg
    19081 ttgagaatgc agatgagttg ccagttatcg aagttgaata agaactcgta acaaattaaa
    19141 tgcatcttgt atagactttg tcagtcacag gctggcaagg tctatctggt ttttaggaaa
    19201 gaggagaaga tatggatatt aactggcagg cagtttttaa tgcagatatt gcaagagagg
    19261 ctattccaca gattttggag ggacttccct acactctatc cctatcccta attggttttg
    19321 ccttgggaac tttctgtgga ttttttgtag ccctcatgcg gatgtctaag tttggcccct
    19381 tgcgttggtt ggctatggcc catatttctc tcatgcgtgg aattcccctc atggttcttc
    19441 ttttcttcat ttattttggt ttgccgttta tggggctaca actagatgct atctccgcat
    19501 ctattatcgc ctttacctcc atgtctagtg cctacatttc tgaaattatt cgtgcatctc
    19561 tttcggccat tgataaggga caatgggagg cggcgcgttc cctgggcttg cggaccaatg
    19621 tgatttaccg aaaaatcatc atcccccaag ccttccgaat tgccctacca cctctgagca
    19681 acgttctctt ggatatggtc aagagtacat cgttgaccgc tatgattacg gttccggaga
    19741 ttttcaataa ggcaaaaatt gtcggaggag ccaagtctga ttatatgacg gtttatatct
    19801 gtgtagccct catttattgg gttatctgta ccctttatgc atttggtcaa ttacaactag
    19861 aaaaacgctt ggcgacctat taaaaagagg ttggcatatc cttccaatta aaatttgaac
    19921 aattaaaaat agcttagaat ttcagtctcg aatgacgtgg tcctaagcta ttttcttatt
    19981 ttaaagactg ttttttcgat gtaactctca ctctttcaca tattccaaaa tatctcctgg
    20041 ttggcagtct aagatgcggc agatgctcat caaggtattg aaacgaatgc ctttggcctt
    20101 gcctgtcttg agaatggaca gattggcttc ggtgatgccg acttgctctg ctaggtcctt
    20161 ggaagtcatt tgtcgatctt tgaggacctt gtctaagttt acgcgaatca tttccatatc
    20221 agataaactc gctgttctcg gtttcaagtt gttgcccctt ttgtactaag gtccagacaa
    20281 aataagtcag gaagataaag agagcattga ggatgaaatc tgaccaacgc agattgagga
    20341 agttgtttgg tccagcagca tttgtcaagg cgatcaagct ggttaggcaa aattgcccag
    20401 cagtcaggac gagcaaactg atgaagagtt tctgataaag ttccagacta gctgaagcga
    20461 aataatcttc ttccagaagc aatttacata acttttgaat caagtgggca atgtgactga
    20521 gtaccgccaa gatgattaag attaatccac ttgttaaaag aatgagccag acactgatct
    20581 ggtcaatggg tttgttaaag gtgtattccc aagagcctat cgcaaaggag tcgcctccaa
    20641 gaccagccag gctaaagaaa atatagcctg caattaataa atagaagaaa tagcgaacac
    20701 aaccagctaa caatcctgct attttgagta gattggtttt catagcaaac ctccaattat
    20761 tattgtttta tgataatatc atctgtaaaa ttattataaa acaataattt ctgaaatgca
    20821 agcgtttttt taaaaaaaga ataataagaa aaccgccaag tagctggcgg ctttctgcta
    20881 tttaaaatac aagagtctca acccattcaa aatcaccaaa atcgttgatc cttcgtggcc
    20941 caccacaccg agtgggaggt tgatagactg gaagaggtta gagatgataa gaagggcaat
    21001 gacagacagg gcaaagatga tgttctgctt gatgatgccc cgcattttct tagagagacg
    21061 aatggagtaa ggaattctcg tcaggtcttc catgagtacg atgtcagctg actccatagc
    21121 gatgtccgta ccgcttccca tagcatagct gacattggct tgggcaaggg caggagcatc
    21181 gttgataccg tcgcccacca tgccgacaga cgcaaactcg gtttgcagtt tttggataac
    21241 ggcagcctta tccgtcggca gacagttggc aatcacacgg gcaataccga cctgacttgc
    21301 tacgtaacga gccgtctttt cttggtcacc tgtcaagaga attggtgtca cgcccatctc
    21361 tttcaactgg gcaattagct gcttgctctc aggtttcaaa ctatcttcca ccataaaaat
    21421 cgccgccagc atatcatttt ggctgacata gactagggtt ttcccagtgc tttccgcctc
    21481 atcgatttgt gccagcaagc tagcagacag gggactgacc aagctatcta ccacaaatcc
    21541 cgccttaccg attttccagc tgtcgccctc atatctcgcc accaagcctt ttccggtcac
    21601 gtcttctagg ctttggaggt caatagcaga gctgtcagcc gtataggtca tgagagcctg
    21661 ggcgattggg tggcttgatt gtttttcaac tgcctgaaca acctgtttga taagctcctc
    21721 atcgccaaga taggttacac ctacaacttc aggtttacca atggttaggg tacctgtctt
    21781 gtcaaagacg atagcttcta aattggcgat attgtccgca atgtcaccac ccttgataat
    21841 catacccttg cgagccgcac ggctgatggc agaaagagtt gccggtgaag aagaagctac
    21901 gagagcgcag ggagaagcaa tagttaagag aatcatgcca cggtagaagg cagtcaacca
    21961 gtcccagccc agagcaaaat gagcgaagag gataaagaga ggtaccacca ccaaaacaac
    22021 cttgacatag gtatcttcca tattttcaat gaaagtcgct gtttttgatt tggattcttg
    22081 ggcgttttcg accatttgga cgattttatc gaagagggca tcgccttttt cagccgtaac
    22141 ttgtacggtc acggttggac cttggttaat ggttccgccg ataacagcag cgccagccat
    22201 tttctccgca gggagcggct cgcctgtaat catggattcg tcaaagatgg attgcggact
    22261 gatgagggta gcatccagtg ggaccgtgtc acccttgcgg acttgcaaga ggtcaccgat
    22321 gcgaatggct gccgtgtcta agacagtaat gtcaccattt tcctcgattt tacgagccgt
    22381 tggaggtgtc atgttcatga gggctgcgat agcgttttta cttttctcca tggctaattc
    22441 ttccagagta gaagaaaggg agaagatgaa gatgagaaga gctccttcca tccagtagcc
    22501 gatgagacca gagccgatag cagccaaaat catgagcagg tcgacagaca ggtgcttatc
    22561 cacaaataat tctgtcagac cttccttggc agactggtag ccaccgatga taaaggctga
    22621 aatgaagagg ataggagccc atccctgttc agtctgaaac agaaggatac ctattagaat
    22681 gagcgccaag cagagagcgg tcgtgatgat gtggctgtgt tgtttgaggt tggttacgag
    22741 tgtcatagtt tgttcttcct tatttagaat tattatcatt taactaagtt aattataaca
    22801 attataaaaa gaaagtcaag ttatttataa taattctaaa taagatcttt ctgataattc
    22861 aaaggaaaat aaaaaaagcg acagaaagcc gctttgatat tcgtctttta cccctgacaa
    22921 tcaggacaaa tgccgtagat ggatagtacc tcttttgtaa ttttgtaacc agtttgggta
    22981 tgagcttcct tcttcaagct cgggatttct acatccatga aatcagtgat ttttccacag
    23041 acttcacaaa taacattgag gtgttcgtgc cccataaagt cgtaataagt agtattatca
    23101 ttggtccgtt tcaattcggt cacgaaccct tcttccaata gaagtttgag gttgttgtaa
    23161 acagtcgcca gactcatgtt ggggtagtta gggagtagat cttgataaat catttcagca
    23221 ctagggtggt catcgctttc gataatgtag gcaacgactg cttttctagt ttcggtaatg
    23281 cgtactccct tttcttttag atgttggatg acgtgttcaa aagcagtttg gttttctgca
    23341 ttgaggtgag aatggagttc catagtttcc tcctttcgtt attattttat aaaaattcta
    23401 agatacaata ttcagtttca ttatagtgta tttgggaggt tgtgtcaatt ttgagacagg
    23461 aaatctgtca taggacagtt tggtgtctca tgacttgttt acatactttt cctgtgctac
    23521 aatcaaaaca tgacaagata taaggcaatt atttcctacg acggacatga cttttctggt
    23581 tttcagcgcc agccccatgc ccgtaccgtt caggaagaaa tcgaaaaaac gttagtaaga
    23641 ttgaatagcg gccagccagt aaccgttcat ggtgcaggtc ggacagatgc aggggtacac
    23701 gcctacggtc aggttataca ctttgacttg gctggcagtc gagacactga gaagctccgc
    23761 tttgccctgg atacccaaac ccctgaagat attgatgtgg tcagtgtgga gcaggtggcg
    23821 gatgattttc attgccgcta tgccaagcac agcaagacct atgagttttt ggtggatatt
    23881 gggcggccta agaatcccat gatgcggcac tatgcgacct tctatcccta tgatttggac
    23941 ttgagcttga tagaagaagc tattcaggat ctggtgggga cccatgactt cacaggcttt
    24001 acagcttcgg ggacctcggt ggaggacaag gtgcggacca ttacggcggc aagcatggaa
    24061 tatgaccagc ggcggcagtt cttgattttc accttttcag gaaacggctt tttgtacaag
    24121 caggtgcgga atatggtcgg gacactcttg aaaattggca atggtcgcat gcctgtggga
    24181 cagattaagc ggattttagc agaaaaggat cgtggtttgg caggtccaac tgcggcgggc
    24241 aacggcctct atctaaagga gattatctat gaagactaag tatattttgg cgctttcggg
    24301 caatgatatt ttcagcggtg gtggtctcca tgcggatctg acgacctacg ctgtccacaa
    24361 gctgcatggg tttgtggcgg tgacctgctt gacagctatg acggaaaaag gttttgaggt
    24421 cattccgacg gagactgcgg tatttgccca gcaactggct agtttgaagg atgtgccctt
    24481 ttctgcgatt aagatcggct tgcttccgac ggtggaaata gcagagcagg ctttggcgtt
    24541 tgtcaaggct caccaggaga ttcctgtggt cttggatccg gtcttggtct gcaaggaaac
    24601 gcacgatact gaggtcagcc agttgcgaga tgaattcttg aagttccttc cccatgtcag
    24661 catcaccacg ccaaatctgg cagaagctca gctattgctc caaaaagaca tcaaaacggt
    24721 ggaggagatg aagcaggcgg cagtggcctt gcatgacttg ggagccaagg cggtggtcat
    24781 aaagggaggc aatcgcttgg gcaatcagca ggctgtggat gttttctacg acggtcagga
    24841 agtagtggtg ctccagtcgc ctctgctgtc agaaaataat gtgggggcag gctgtacctt
    24901 tgcgtccagc attgccagtc agcttttgct gggaagagaa cctttcgagg cagtcagact
    24961 gtccaaggac tttgttcatg cggcgattga aaaatcagat gattatgggg tgattcaata
    25021 tgagaaataa aaaaacacaa gaattagtat tattagctat cttaacagcc ttgagcttgg
    25081 tattagcctt tgtttatgtg ccaactgcaa ctggttttgt cacgctcttg gatgttgggg
    25141 tatattttac agccttttac ttgggcaaga aagagggagc cattgttggc ggtttggcag
    25201 gactcttgat agatttcttg ctaggctatc cccagtgggc tttctttagt ctagtattcc
    25261 acggagctca gggttatttt gcgggttgga caggtaagaa acggattctc ggtttagtct
    25321 tggcgaccct ctctatggtg gggggctatt acctagcatc tcggatttat tttaatgacc
    25381 tcaaagccat tgaaagtgtt ctaagcaata ccttgcaaaa cacagttggt ttggtagttg
    25441 gttacatctt ggctcaggca atagaaagaa ttggtgcagt aaatcatgtc attaaaggaa
    25501 attaaagacc aaactaagca agttgtgcaa gaagtcctag aactcagtaa tcttcaaaag
    25561 ggacagattt ttgtccttgg attgtcctct agcgaagtca taggagggca catcggcaaa
    25621 aattccagtc tggaagttgg tgaggtggtt gttgaaacca tcttggaaat cctggagcca
    25681 aaaggtatct atctagctgt ccagggttgc gaacacctca atcgtgcctt ggtggtggag
    25741 cgggaattgg caatccagaa ggacctggaa atggtcaatg tcttgcccac ccttcatgca
    25801 ggtggttcag gtcagctggc ggccttcaag tatatggagg ccccggtgga agtcgagttt
    25861 atcaccgcac aggctggcgt agacattggc gacacagcta tcggcatgca catcaagcac
    25921 gtccaagttc cgattagacc tagcctgcgt gaaattggac aggcccatgt cacagctctc
    25981 gccagccgac caaaactaat cggcggagtc cgagcagcct atcaggaaga tgagatacgg
    26041 aaaggttcat aatgaaagaa tttacggtca aggatttagt gtggacccgt ccaccgagac
    26101 aattcactat ttcagatgaa gaaattacca ttacaacaga acccaagacg gatttgtggc
    26161 agaagaccta ttaccatttt gtgaatgaca atgctcctgt cttacagatg gagacagagg
    26221 aggactattt ttcctttgct gtgaagacgg attttgcggg tagtcatact cgatttgacc
    26281 agtgtggaat tgtcctttat caagattcgg agaattggct caaatgttca atagaatatg
    26341 aaaatgatga cttccaacac ttgggaagtg tggtgactaa tcacggcttt tctgactggg
    26401 caactactga aatcagttca caagttaaat ccatgtggtt taggctcagt cgcaggggag
    26461 ctgattactg ttttgaaaat tccgaagatg gtatccactt caaacaaatg cgggtttgcc
    26521 attttcatca aggggcgggg aaaatagctt ttgggctgta tgcctgttca ccagaaaact
    26581 ccagttttac agctcgcttt accaatatgg aattgagcga ctgcaaatgg ctgccccatg
    26641 acggacaaga gccagatgaa atatagtgag agtcttaggt aagtagtaac agaaaaatag
    26701 ttgaaactca tactcttcga aaatcaaaaa gatccgttgt caacttgcct tgaagaactc
    26761 ctgttcaatc ttcgccttcg tttcctaggc gacttttgat tttcattgag tatcaggaag
    26821 taactttcga ctagtaagag agttactttt tttatctttt gagccaaatc cttgccaaga
    26881 agtctggctt ttgataaact tgttcctgta aatgatacaa gaacaaaagg agaagacatg
    26941 acaaaaggat accaacaacg attttcattg tcgattttat tatggatgcg tcaggataaa
    27001 gcacgccaag aggggatgga ctactggagt ggcgggcatg cacagattat tgcagcttca
    27061 ccgggtctat tagaataccg ccagcaacat ttgagtaaga cagaacatag tttttggccg
    27121 aaagtgacag gcttggaaac ggctattcct gaagaccgtc ggattgatgg cattgcggaa
    27181 gtaacctatc aaaagttatt ggcaccaata ggcggtcgtc gtcagactgc tcttgctttt
    27241 gaagatgagg tcaacgtttt ccgtcggacc ttgatgcaca tgggcttccc ttattcatca
    27301 cgttggtacc atactagtac tcagacccaa acccaactgc gtgatgtcct ttacttccgt
    27361 cgcaaagatg gtgtgaagag cagtagtttc aaaaaatttg ttcaagatgg actcgccagt
    27421 caactggcga caatctctgg ggtaacggaa gtacggacac aggtctatct tccttggaat
    27481 aaagcgactt ggaatacccc aaatgttgcc catgacaatc ctaaagaaga ccaccttcat
    27541 gcctccatca tcctaggttt tgcggatcag gtggcaagag aggtcttcta tgccaaccta
    27601 gctccgcagt tgaatgcaga agtggtgcaa tactcctcag cagtccacgc ctatcatata
    27661 gaaaaaacct tgccatttgt cctagacggc aaacgcatgt aagacaagcg acttcttggt
    27721 cgaatgcttt gttttaaaaa acataaagca aaagacttgc caagaagtct agcttatggt
    27781 aaacttgttc ttgtaaatga tacaagaacg aaaaggaaag cagatggata caaagttttc
    27841 agtcgccctt catatactga ccatgatcag tgagagtaag gaaatactta gctcgcaagc
    27901 cttggctgag agcgttggga ccaatgccag ctacatccgc aaggtgattg cactcttgaa
    27961 aaatgcaggc ttaatcactt cgcaccaagg acgatcgggc taccaattga gcaagtcccc
    28021 taaggatatt agcttattgg aaatctacct tgcgacgcaa gaagtggagc atattcgtct
    28081 atttcagata caccagaatg ccaatctttc ttgtccagtt gggcagcata tagaaggcgc
    28141 aatggttccc atcttttcca gcgttgaaca agaactggaa catcaactca gtcgtcaatc
    28201 cttagagaat gtaattgata atctctatca atccgcacaa gaaacccgaa tctgacctcg
    28261 gtcagatttt ataaactcaa acatagacct gtaagtgata caggaacaaa ctaactaata
    28321 gaaaagagaa caacatgaaa gcagcacaac acacatctta taataaaaac aagatcaccc
    28381 ttaaccttac agaaattgct aaaccaacta ttcaagctaa ccaagtcctt gtcaaagtaa
    28441 ccgctgcagg cgttaatcca ttggacaaca tgatttcacg cggagatgtg aaattgattg
    28501 tcccttacaa attgccccaa acagctggaa atgaggtagt cggattggtt gaagaagtcg
    28561 gtgcaactgt aaccaacttt gcagcaggtg atcgtgtctt cggtcgtctt ccacttgata
    28621 gtatcggtgc ttttgctgag tatgtagcgg ttgacgctca ggctcttgct aaggttcctg
    28681 cctacttgac agatgaagaa gcggcagctg ttcctttgac agctttgacc atcatgcagg
    28741 cccttgacct catgggtgca caagctggta agaccatctt catctcaggt ggaactggtg
    28801 gtgtcggtgg tatggctatt ccgattgcca aagccaaagg cttgacagtt atcacaaatg
    28861 gtgatggtgc aagtggtgaa cgtgtcttga aactcggtgc agaccgtttt atcgattaca
    28921 agacggaaga ttacaccaaa acacttagca atgttgacta tgtcttggac acacttggtg
    28981 gtgcagaaac tgaaaaacaa atgtccatca tgaaaaaagg tgggcagctg gtttcccttc
    29041 gtgccatgcc aaatggcgaa tttgccaaac gtatgaattt gccaaaatgg aaacaaatct
    29101 tgtttggcct agcgggtcgt tcatttgaca aaatggctaa aaaatatggt gttcactacc
    29161 atttcatttt cgtagagagc aatggtcgcc aactgcaaga agtagcagac attttcagca
    29221 agctcgaaat caaaccgtct atcgatactg tttatccatt tgaagaagtt aacgcagcac
    29281 ttgataaggt tgccaacggt cgttcacgcg gaaaaaccgt cctcagtttc aactaaaaca
    29341 gtaaaatata caaggaaaaa tcatgtcata tattacaact aaaaaccaat acatcaccgt
    29401 ttcaaaacaa taaaatcgcc tatcgtgagc tcagcaaggg caagtctgac cttcctttgg
    29461 tcatgctagt tcacctagcc gcgaccttgg acaactggga tctaaaattg ctggatttgc
    29521 tggctgaaca gcaccatgtg attgtcctag accttcctgg cgtaggcgct agtcaaggca
    29581 aggtggctcc gactattcca ggaatggctg agcaggctgt ttccattatc acggttttgg
    29641 gtcatgagaa aatcaatttg ctaggtctgt ctatgggtgg ctttattgct caagaaatcg
    29701 ttcgtctgga tagtcaattg gtcaaccgtt tgattttagc aggtacaggt cctcggggtg
    29761 gttttgaagt tgataaggtg actggaaaaa ccttccgcta tatgctgaag gctggtttgg
    29821 agcgtgtgga tccaaaacgc tacatcttct acaatcatga tgaagcaggt cgtttggagg
    29881 ctgaaaaagt cttggggcgt atggggcaaa gaagtgctgc tcatgcagac aaggacatga
    29941 atgtttcagg atttttgaca cagctgaaag ctatcaaacg ctggggaaga gagccgcaag
    30001 atgatatgac ctttatcacc caaccaactc tgatcgtcaa cggtgataag gatatgcagg
    30061 ttccaacaga aaattcttat accatgcatg agaaaatcaa aaatagccaa ctgatcatct
    30121 atccaaatgc aggtcacggt tctatcttcc aaaatgcaga ggatttttcg aaagccttac
    30181 tagccttttt ggaggaaacc aatgcctaaa accattttaa tcactggttc gacggatgga
    30241 atcggcaaac acctagccat gaaactagct agtgaaggcc atgaagtgat cttgcacgga
    30301 cgaaatagcg aaaagctccg tgtagccctc agtgatattc aactaaaaac aggaaataaa
    30361 aagattcacg gctatcttgc agatttttcc aagttagcag atgtctatcg tttcagccaa
    30421 gaaattaaac gcgattttga gcagattgat gtcttgttaa acaatgcggg tgcttacttt
    30481 ggagatgccc gtgtggcaac ggcagaaaat atcgagatga cctttatgct gtctgtccaa
    30541 gttccgtata tcttgacgat ggagttgctg cccttgctgg aaaaagcagg aggcagggtc
    30601 attcatacct cttccttcat gcaccatttt gcacaaacca gaggcttgga ttttggttta
    30661 gagcagagct attctgcagc catggcttac aataatgcca agctttacac catttggctg
    30721 gcaatagctc aggcagaggt cttagaaaag caagggtcat ctgtaaccgt caatgcctac
    30781 catcctggtt tgattgcgac aaatttgggc aatgatgggg gcaaacgcaa cctgagaagt
    30841 cggattctca ctagtctgat gaaaccattt tccaaggatt tggaccaggg gattgaaacg
    30901 ggttactatt tgagtctgtc accagaggtg gctggagtat caggtcgtta ttttgcggag
    30961 aaaaggttgg ctaaggtcag cttgaaggga tttgatttgg caaagagcca ggccttacta
    31021 gcctatcttg ataagaaaat ccaagtattt aaggagagct acggtgacta agattttgtt
    31081 agaaaacctg caactaccca atggtcaggt cttagacaat cgctttttca aatccgccat
    31141 gagcgaaacc ttggcagata gtcagggagc tccctcggat gacttgattg ctctatatga
    31201 ttactgggcc aagcagggaa tgggtgtcct agtgacaggc aatgtcatgg tggacggccg
    31261 ctaccttggt gagccgggca atgtggtcct tgattcagac gatcatctga ctcaatttcg
    31321 gaaatgggca gccattggta aaaagaatgg tgtgcctatc tggctccagc ccaatcaccc
    31381 tggcaaacag atgtatcggt cgatcaatca aactccaatt gcgcccagtg ccattccgat
    31441 ttctggaagc tcagcttcgg cctttcgtcc accgagagaa atgactgtgt ttgacatcaa
    31501 agaagctaga gataaattta ttgcagcagg ccttcgggca aaagcggcag gatttacagg
    31561 tgtacagtta cacgctgcac atggttactt gatcaatcag tttctctcgc cagcagacaa
    31621 tcagcggacg gaccgctatg gtggcagtct ggacaatcgc atgcgattct tggtagaagt
    31681 ctatcaaggt ctgcgtgaaa aagtaggacc agattttacc atcgccttga aattgaatgc
    31741 ttctgatttt aaggaagagg gctttggttt tgaggattgt aagcatgtgg tgaaaaccat
    31801 gtctgacttg ggtattgacc tgatcgaaat ttcaggtggc aattatgaga cacctgtttt
    31861 tggtagtgaa tatgagaatg gtgctggatt tgtcacctat gccctagcct tagcagattt
    31921 gacttctgtt cctattgttt caacaggtgg tttccgaaaa atcactcaga tggaagaggc
    31981 tatcaaggat ggtgtgtcca tgattggtct tgccagaccc tttgtgcttc gtccaagtct
    32041 tgtcagtgat taccgtcaag tcggtgatct gcaactgaca acacctcgcc tgacaacagg
    32101 tcttccaaaa ctggataagg ctcttggtcc cattattggc gtcagttatt acgaggcaca
    32161 gatgaaacgc ttggccaagg gaaaatctgt caccgtcagt caacatgcct ggccctatct
    32221 tctccaaacc atcaaggccc acggcctgtc agccttgaaa ccgaggagga agtagaataa
    32281 actagaaaag atttgagagt ccatctcaga tcttttttcg atgaattgag gtgagaaaaa
    32341 taaatccgac acttttgtta aaaattgtcg ttctctaaca gtcgttattt gggtaaacta
    32401 aatacatcaa aagaaaggag gtttgcttga tgtcattttt agaagcaaac gaaaaaatcg
    32461 cagagaaagt tgttggtgcc cataaggcaa tagaaaaaac ggttgtggga ggctataagg
    32521 caacaaaaaa tgtagcagtt tcaggtttca atacaatttc agataaattt atcggagcat
    32581 tttttacaaa ggataatgaa acagtagagg aagcaaaggc ccgcatgtct aaaatggact
    32641 ttaatcaacc taactcatct aagggtgatg acaagtaagc aagagtagat tttcttgcta
    32701 accatactaa ataataagaa gaaaaggaat attatgaaaa aaagagattt tatcagtttg
    32761 attgcttata cggtgagttt attggtctta gctttaggga tgtgctttta taccttgccc
    32821 gaatgggaaa tgactaccct agggatgccc ttatcggtag ccggtctgct attacttgca
    32881 ctatcttggg ttctgcagag gaagttagca ggtaaagggg cacctaagtt tgattggaaa
    32941 cagattgtta aagtcatcta ctgtgttttt gccttgttgg tttttggtgg aggcttcgcc
    33001 cttgtgacaa ccggaaattt tgtcctcggt cttattttag gccttgttgg ccttatatta
    33061 gtgattggga tgattcctgt aactgttggc ttaaaaaatt aaagaggcta ggcaaaaagc
    33121 ccagcgccac ttctcagagt tcgtgtcaac atctcagcgc agtggttgat tggcagattt
    33181 gttcgtgttt tacactccaa atctgaccta atcaactgtg cgggggtggg aaaacgaact
    33241 cttttttac
//
LOCUS       DBNFCX010000017        32653 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.017, whole genome shotgun sequence.
ACCESSION   DBNFCX010000017 DBNFCX010000000
VERSION     DBNFCX010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 32653)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32653)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32653
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.017"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            8..1618
                     /locus_tag="AC1PJC_000663"
     CDS             8..1618
                     /locus_tag="AC1PJC_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIP6619684.1"
                     /translation="MKHTFGKTVVTLLASTVLLAACGSKNTASSPDYELKDVQFPLEK
                     SVTLKFMTASSPLAPADPNDKLIFQRLEKETGVHIEWTNYQSDFGEKRNLDIASGDLP
                     DAIHNDGASDVELMNWAKQGVIVPVEDLIDEHMPNLKKILDENPEYRSMITAPDGHIY
                     SFPWIEELGEGKESIHTVNDIAWINKEWLNKLGLEMPKTTDDLIKVLEAFKTKDPNGN
                     GKADEIPMGFINGGGNEDFKILFGAFGVGDNDDHLVVSNDGTVDFTADNEDYKEGVEF
                     MRTLQEKGLLDPEAFEQDWNTYIAKGSENLYGVYFTWDKANITGMNDTYDILPVLAGP
                     DGTKHITRTNGMGFQRDRMVITSANKNLELTAKWIDAQYAPLQSVQNNWGTYGDESQQ
                     NIFEYDAATDSLKHLPLNGTAPGELRQKTEVGGPLAILDEYYGTVTTMPDDAKWRLDL
                     MHATYLDYVTNDDIYPRVFMEQEDLDKIAQVEADMNDFIYRKRAEWIVNGGIEEEWDS
                     YLKELESYGLSDWLAIKQKYYDQYKENQ"
     gene            1636..2994
                     /locus_tag="AC1PJC_000664"
     CDS             1636..2994
                     /locus_tag="AC1PJC_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 32 protein"
                     /protein_id="HIP6619685.1"
                     /translation="MKTVEKANAYIQTEKGNVNPIFKPQAHLTPETGWINDPNGFIYF
                     RGEYHLFYQFNPYESVWGPMHWGHAKSKDLVNWEHLPVALAPDKDYDKDGCFSGSAIV
                     KDDVLWLMYTGHINNEDGTVSQVQNMAFSTDGIHFEKIEQNPVATADGLPEEVIANDF
                     RDPKIFEKDGHYYSVVATKHKDNVGCIVLLSSPNLTDWKFESIFLKGEANQGFVWECP
                     DYFEVDGQEYLIISPMRYQKDGNDFININSNIFVTGHVDWDKKVFVADSFKEIDHGHD
                     FYAAQTTEGPEGERVMVAWMHTWGRKLVTNDLGHKWYGQMTLPRLLKQGENGLRQVLP
                     EGILNSFDDIEIGQVIQGPSKLSLKLDDSLDLKLGTDRDYLQFGYDKAKQEVYIDRSS
                     LKIQQVGEEEWSTVRRAVTVQATELEVLVDTNCLEIFINDGQETLTSTFYVEGQIILN
                     AL"
     gene            3120..5489
                     /locus_tag="AC1PJC_000665"
     CDS             3120..5489
                     /locus_tag="AC1PJC_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HIP6619686.1"
                     /translation="MRKTSKKGKATRRPTKAELAQQERVKNITLRVLGLLFIAFAASR
                     LGVFGVTSYNIFRLLFGSLAYLLLAGAFIYLLIPKVLREREGTISGFWLIVIGLLIEF
                     QAYLDWTYQGSDLFGHTLKLALSDLAKFQVTAFLGGGMIGSIFYLPVSFLFANVGSFF
                     IGLLVIAFGIFFVSPWSVYDVADGLAVAKDKLVETQVKRAELRTQKKAEREEKRQQEL
                     ARLEEERLRLEEEEESARALALVDRHVDLETGEILEEEPVQVPIISEYDHLDIEDEFP
                     IMLAEDDQPAQSNSASQDSEPNEFEKDETDVQIDFKPKQRLAYKLPSIDLFAPIKAKS
                     QSNEKRIVRQNIKVLEDTFASFGIKVVVERAEIGPSVTKYEVKPAVGVRVNRISNLAD
                     DLALALAAKDVRIEAPIPGKSLVGIEVPNSEVATVPFRELWEQSKTDPDKLLEIPLGK
                     AVNGSVRSFNLARMPHLLVAGSTGSGKSVAVNGIISSILMKAGPDQVKFMMIDPKMVE
                     LSVYNDIPHLLIPVVTNPRKAARALQKVVDEMEKRYELFSQIGVRNLEGYNAKVEEFN
                     SRSEEKQIPLPLIVVIVDELADLMMVASKEVEDAIIRLGQKARAAGIHMILATQRPSV
                     DVISGLIKANVPSRIAFAVSSGTDSRTILDENGAEKLLGRGDMLFKPIDENHPVRLQG
                     SFISDDDVEAIVGFIKDQADADYDESFDPGEVAEGDGDAGFGDAGGDPLFNEARALVV
                     ETQKASASMIQRRLSVGFNRATRLMEELEAAGVIGPAEGTKPRKVLETQ"
     gene            5489..5875
                     /gene="gloA2"
                     /locus_tag="AC1PJC_000666"
     CDS             5489..5875
                     /gene="gloA2"
                     /locus_tag="AC1PJC_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002931159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMU1112c/YaeR family gloxylase I-like
                     metalloprotein"
                     /protein_id="HIP6619687.1"
                     /translation="MKFDAVHHIAIIGSDYDKTREFYVEKLGFEQVDEHIRPEKNDIL
                     FNVKKGNLILEIFIKPDAPMRPAMPNPEHTGLRHLAFQVADVEACLEEFDRIGIRHEV
                     LRTDDFDGKKMAFFFDPDGLPLEIHE"
     gene            complement(6243..6611)
                     /locus_tag="AC1PJC_000667"
     CDS             complement(6243..6611)
                     /locus_tag="AC1PJC_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3397 domain-containing protein"
                     /protein_id="HIP6619688.1"
                     /translation="MFESIIFLKIVAFLFIFLTLAISIIAVKFFRLQNRGWNFADIAF
                     PLYAIEFYLISDKAYYNSLLPQLVLALSLLAIGLCGFFLLKKKNFLYRRFFKVFWRAS
                     FILTFLMYLALVIAVFTLKS"
     gene            6766..7191
                     /gene="rplK"
                     /locus_tag="AC1PJC_000668"
     CDS             6766..7191
                     /gene="rplK"
                     /locus_tag="AC1PJC_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004226069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HIP6619689.1"
                     /translation="MAKKVEKLVKLQIPAGKATPAPPVGPALGQAGINIMGFTKEFNA
                     RTADQAGMIIPVVISVYEDKSFTFITKTPPAAVLLKKAAGVEKGSGTPNKTKVATVTR
                     AQVQEIAETKMPDLNAASLEAAMRMIEGTARSMGFTVTD"
     gene            7232..7921
                     /gene="rplA"
                     /locus_tag="AC1PJC_000669"
     CDS             7232..7921
                     /gene="rplA"
                     /locus_tag="AC1PJC_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006145049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HIP6619690.1"
                     /translation="MAKKSKNLRAALEKIDSTKLYSVEEAVALAKETNFAKFDASVEV
                     AYNLNIDVRKADQQIRGAMVLPNGTGKTSRVLVFARGAKAEEAKAAGADFVGEDDLVA
                     KINGGWLDFDVVIATPDMMAVVGRLGRVLGPRNLMPNPKTGTVTMDVAKAVEESKGGK
                     ITYRADKAGIVQALIGKVSFDADKLVENFKAFHDVMAKAKPATAKGTYMTSVSITTTQ
                     GVGIKVDPNSL"
     gene            8028..8318
                     /locus_tag="AC1PJC_000670"
     CDS             8028..8318
                     /locus_tag="AC1PJC_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619691.1"
                     /translation="MKVAEKEELYKYLSAAYNLPQEAFSEALREKILEVAGQLDKEEN
                     LYILAGHLSRFINAELTALTCRAPKELVQLAHYLQEVQNQYRYASLFPGKVK"
     gene            8327..9115
                     /gene="yghU"
                     /locus_tag="AC1PJC_000671"
     CDS             8327..9115
                     /gene="yghU"
                     /locus_tag="AC1PJC_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent disulfide-bond
                     oxidoreductase"
                     /protein_id="HIP6619692.1"
                     /translation="MTEYTKPLVWKWEDENDNRSGNRPTAGSRFEQDLPKGEKPFQVY
                     SLGTPNGIKVAIMLEELKELGISEADYDLFLINIGQGDQFGSDFVAINPNSKIPAMVD
                     YSEQEPISVFESANILLYLAEKFDAFLPKAWVERTEVLNWLFWQTGAAPFVGGGFGHF
                     FHYAPTAQEYPINRYTMETKRQLDLLDRLLATREYVAGSTYTIADIAIWSWYGRLVQG
                     ELYPGSAEFLDVDSYKHLKSWVEKIAQRPAVQRGLTVKYHSIDN"
     gene            9370..11010
                     /locus_tag="AC1PJC_000672"
     CDS             9370..11010
                     /locus_tag="AC1PJC_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative polysaccharide biosynthesis protein"
                     /protein_id="HIP6619693.1"
                     /translation="MSEKVEMQQSKEQATMARGLAWLTAGNILSRLLGVAYVIPWYIW
                     LGEYRAEANALFSMGYQIYANFLLISTAGLPTAIAKQVAKYNVLGKEEVSLYLVREFF
                     KLMLVFGAVFAGVMYLSAPWLADASGSKEKLLPVMYSLVPPLFIFPAMSILRGFFQGR
                     HDMKPYAISQLAEQLVRVIWILAATFMIMKLGSGDYLEAVVQSTFAAFVGMIASVGIL
                     VYTLWKQGYLGKLLHAKKQKISLDTGQLIKETVRDAIPIIILGLTIQLLQFIDQVTFI
                     RVMERITDYSNSELLELYSYMAANPSKITMMIIGISLSLGSVAIPLITEKFVKKDLKA
                     ASHLVADNLQLLFIFTIPAIVGTVLLAGPLYTIFYGPSEPIAITLFIWNLFLILPLGL
                     YSVISVVIQAIFENRRAIYYFLIGMLVKIVLQVPMIYVFKVYGSFISTIFGLGIMLYL
                     FYRRIDKVLHIDERLVIKDIATISWISIVMGFIVWGIEFVLNLILPANGYVSSFIHLA
                     IAGGAGMLVFVILTLKTRQLDRLIGSRAQSLRRKLRLG"
     gene            11177..11911
                     /gene="pyrH"
                     /locus_tag="AC1PJC_000673"
     CDS             11177..11911
                     /gene="pyrH"
                     /locus_tag="AC1PJC_000673"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015445263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HIP6619694.1"
                     /translation="MMKPKYERILIKLSGEALAGERGVGIDLKTVQEMAKEIQEVAES
                     GIQIALVIGGGNLWRGEPAAEAGMDRVQADYTGMLGTVMNALVMADSLKQLGVDTRVQ
                     TAIAMQSVAEPYIRGRALRHLEKGRIVIFGAGIGSPYFSTDTTAALRAAEIEADAILM
                     AKNGVDGVYNADPKKDANAVKFNELTHREVISRGLKIMDATASTLSMDNDIDLVVFNM
                     NEPGNIKRVVFGEPIGTTVSNSSEEK"
     gene            12046..12603
                     /gene="frr"
                     /locus_tag="AC1PJC_000674"
     CDS             12046..12603
                     /gene="frr"
                     /locus_tag="AC1PJC_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016481061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HIP6619695.1"
                     /translation="MSKEIIAKAQERMNQSHQSLAREFSHIRAGRANASLLDRISVEY
                     YGSPTPLNQLAGITVPEARVLLITPFDKSILKDIERALNASDLGLTPQSDGTVIRLVI
                     PALTEETRKNLAKDVKKVGENSKVAIRNIRRDAMDEAKKAEKAKEITEDELKSLEKDI
                     QKVTDDAIKIIDKMTADKEKELLEV"
     gene            12735..13589
                     /gene="cvfB"
                     /locus_tag="AC1PJC_000675"
     CDS             12735..13589
                     /gene="cvfB"
                     /locus_tag="AC1PJC_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001095444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding virulence regulatory protein CvfB"
                     /protein_id="HIP6619696.1"
                     /translation="MNDLLAQYIVGLVTDENDQFYFVQKEGRTFALSKDEGEHSLGQS
                     VKGFAYTDMKQKLRLTTKEVGASRTSFGWGTVTEVRKDLGVFVDTGLPDKQVVVSLDI
                     LPEIKELWPKKGDQLYVKLDVDKKDRIWALPAFQEDFQKTAGPAYDNMQNQNLRAIVY
                     RLKMNGTFVYLPDNNMLGFIHPSERFAEPRLGQVLEARVIGYRAVDRTLNLSLKPRSF
                     EMLENDAQMILTYLESNGGFMTLNDKSAPEDIKATFGISKGQFKKALGGLMKAGKIKQ
                     DSLGTELV"
     gene            13599..14519
                     /locus_tag="AC1PJC_000676"
     CDS             13599..14519
                     /locus_tag="AC1PJC_000676"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000964166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008677 - 2-dehydropantoate 2-reductase
                     activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HIP6619697.1"
                     /translation="MLVYIAGSGAMGCRFGYQLSKTNHEVILLDNWEEHIEAIRENGL
                     KVTGDVEETVHLPIMKPTEATREADFIILLTKADQLPKMLRDIKPIIGPTTKVLSLLN
                     GLGHATTMRRYVPDESIMVGVTMWLAGLKGPGHAHLEGPGSMSVQHILGDEQSVADII
                     EMLNEAGLNVTYDNHVVSAIWQKACVNGVMNPTCTILDCTIGELFGTEAGLNLVQGIF
                     KEFIAVAKSEADGIDEEAIWKYVIDASKKASNHYPSMHQDLVQHGRKTEIDYLNGAVV
                     FKGKRAGIPTPYCQMITDMIHAKESMLGLR"
     gene            14529..14984
                     /locus_tag="AC1PJC_000677"
     CDS             14529..14984
                     /locus_tag="AC1PJC_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HIP6619698.1"
                     /translation="MLIEVETIEEYMAVLPENRKEAVERLHQVIVEQLPAGFEVGILG
                     GMINYYVPLAAYPDGYHCTPGEPLPFLALALQKAHIALYHMGIYMDQELNDWFVAAYQ
                     AQMPTKLDMGKSCVRMKNPKNIPYELIGELVSKMSMERYIELYEKNHRK"
     gene            14990..15205
                     /locus_tag="AC1PJC_000678"
     CDS             14990..15205
                     /locus_tag="AC1PJC_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001232073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YozE family protein"
                     /protein_id="HIP6619699.1"
                     /translation="MRRSFYSWLMTQRNPKSNEPVAILADYAFDESDFPKQSDNFDEV
                     SRFLEESASFAFSMSDFDAIWEDYLGH"
     gene            15284..16306
                     /locus_tag="AC1PJC_000679"
     CDS             15284..16306
                     /locus_tag="AC1PJC_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HIP6619700.1"
                     /translation="MLEHSIDIQLKHPDDSFSLFGSNERHLRLMEQELGVVIHARTEK
                     VQVIGQEEHVEQARLVIQSLLVLVSRGLVINTPDVVTAISMAKNDEIEKFVALYEEEI
                     IKDNYGKPIRVKTLGQKLYVDSVKRHDIVFGIGPAGTGKTFLAVTLAVTALKRGQVKR
                     IVLTRPAVEAGESLGFLPGDLKEKVDPYLRPVYDALYQILGKEQTTRLMEREIIEIAP
                     LAYMRGRTLEDAFVILDEAQNTTIMQMKMFLTRLGFNSKMIVNGDISQIDLPRKVKSG
                     LIDATEKLSKIPQIDFVHFSAKDVVRHPVVAQIINAYEEEARAADSRASFETIGELKR
                     SEEDGD"
     gene            16296..16799
                     /locus_tag="AC1PJC_000680"
     CDS             16296..16799
                     /locus_tag="AC1PJC_000680"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIP6619701.1"
                     /translation="MEISQFSTHYKVRKITEADLEQVLALYQTNPLYFEYFPPLPSME
                     SLANDLVDCPPGKELSDKYFLGFWDKERLVAILDLIDGYPTAEIAYIGLFMVDSRLAG
                     QGLGSKIIAELLSQLASHFKKVRLGYVESNPQSSHFWSKVGFCPTGEVKEIAGKTIVI
                     AEHALDG"
     gene            complement(16845..17483)
                     /locus_tag="AC1PJC_000681"
     CDS             complement(16845..17483)
                     /locus_tag="AC1PJC_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HIP6619702.1"
                     /translation="MIIHKSVNPVAFQNTYYLENDTHLIIIDPGSDWTKIQATIEKIG
                     KPISAILLTHTHYDHIMSLDILRETYNFPPVYVAESEASWLYTPEMNLSGLPRHDDME
                     NVVCRPAEKIFQYQEDYQFDGFHFKVVPTPGHSIGGVSFIFPEDECVITGDALFRETV
                     GRTDLPTSNFDDLIAGIREHIFTLPNHYTVHPGHGQNTSVGHEKNFNPFFRM"
     gene            17591..20059
                     /locus_tag="AC1PJC_000682"
     CDS             17591..20059
                     /locus_tag="AC1PJC_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DnaQ family
                     exonuclease/ATP-dependent helicase"
                     /protein_id="HIP6619703.1"
                     /translation="MNSMKDTRTSNRYAVVDLEATGTGTDAKIIQIGIVLVENGEIID
                     SYATDINPYELLDDHIKNLTGITDQQLSQAPDFGQVASTIYDMIGDAIFVAHNVKFDA
                     NLLAEALFFEGYELLTPRVDTVELSQLFFPTFEKYSLGNLAEHLELGLDQAHTAISDA
                     MATARLLIKIQEKIKSLPRSIVEKILDLADNLLFESRLVIDEMVPVLSENLSYDLESI
                     HGLVLKKPEEIKSAYRLSEDFSTNIALLGLHERKKQTAFAQVVEKRLVDEEKVHFIQA
                     QAGLGKTYGYLLPLLAKSERPLLVTVPTKLLQEQIMEKEGSKLKEIFRIPVVSLKSPK
                     HFIKLDNYWKTLQRQDDNRLVNQFKMQVLVWLCETTTGDLDELKQKQRYQAYFDEIAH
                     DGKLEPESLFWGLDFWQRLNQQALSSRLLITNHAYFLNHLKDQDPLMDKRLVVIDEAQ
                     KFLLAAENLATASQDLTSMLQVLQSKKDRATTILDQRLYESCQFELNHFLSRFRQHGQ
                     REVQKAELHQLGQNLEELGDVDLNDLHQLIDYYDTFWLEEKNLEEKRLAYLRGSKDSL
                     LNATNYLPDTKIFCISATLTISKKVSLADLLGFEQVTLDLIPTQTVTNQQLLFPTHLP
                     DILAWTKEEHAAYLATTLGEIAELGRPILVLFTSISLLLQVSELLEDNNIPHLAQHKH
                     GQEMTLKRKFERGECQILLGTGVFWEGVDFASQNQLIQVITRLPFDNPKDRFVQKINH
                     HLREEGKNPFYDYSLPMMMIKLKQAIGRTNRHDKQDSLVLVLDPRVHTKRYGQQILSF
                     FEKDYSMLSVDAKEIEGAIQDFFE"
     gene            20221..21297
                     /gene="proB"
                     /locus_tag="AC1PJC_000683"
     CDS             20221..21297
                     /gene="proB"
                     /locus_tag="AC1PJC_000683"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004349 - glutamate 5-kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HIP6619704.1"
                     /translation="MTGKTIVFKVGTSSLTQENGSLDRIKIARITNQLAQLHQKGYQI
                     VLVTSGSIAAGFRRLGFDKRPTKIAEKQASAAVGQGLLIEEYTQNLMKDGIVSAQILL
                     TQDDFADARRYQNASQALQVLLKQRAIPIINENDTIAIEEIKVGDNDTLSAQVASLLK
                     ADLLVLLTDVDGLYTANPNSDPTAQHLPEIKEITEDLFAMAAGAGSSNGTGGMTTKLQ
                     AAQIATKSGVPVFICSSKEDTALLQAVTQANRGTLFLADDHAMNQRKQWMAFYARTDA
                     AVEVDAGAVDAMLHQGRSLLATGVKAFEGDFEVGQVVEVYSQADHRLIGKGRVKLSSK
                     DLQDQLANGRAEGVFIHRNDWVSL"
     gene            21362..22600
                     /locus_tag="AC1PJC_000684"
     CDS             21362..22600
                     /locus_tag="AC1PJC_000684"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HIP6619705.1"
                     /translation="MTTTQALLDSLLAHKASINLATTEQKNQALSAMADQLVAQTEAI
                     LAGNAIDMEHAQGKISQVMQDRLLLTEERIEAMADGIRALIGLPDPVGLVLEESTRAD
                     GLHIRKKSIPFGLVGMIYESRPNVTSDAAALAIKSGNAVILRGGKEAFHSAQAIVTAL
                     KAGLEEVGLSPKVIELVQDTSRASATELMTAKGKIDLLVPRGGAGLIQAVVENATVPV
                     IETGTGICHVYVDKDADLDMALRIVVNAKTSRPSVCNAAEVLLVHEEIASQFLPRLEE
                     ALAGQVELRADSQVQALLNQSTPAGDQDFDTEFLDYILAVKVVSSVEEAISHIAQHST
                     GHSEAIVTENSQTADLFTLHVDSAAVYVNASTRFTDGGEFGLGCELGISTQKMHARGP
                     MGLREMTTYKYIITGDGHIR"
     gene            22610..23395
                     /gene="proC"
                     /locus_tag="AC1PJC_000685"
     CDS             22610..23395
                     /gene="proC"
                     /locus_tag="AC1PJC_000685"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HIP6619706.1"
                     /translation="MKIGFIGLGNMGAALAHAVSQLPETQLLLSNHNPAKAQALQEKV
                     GGQLFSNGEIAEQAEVIFLGVKPHLIQSVLSGLQDQISQNPSAIWISMAAGVTLESLS
                     EYVSADKLIRIMPNTPVAIGQGMTTYSLVNQELAPLLEQILEKSGNVQQVPESLIDAA
                     TAIAGCGPAFVYQMIEALTDAGVQNGLTAQDAKVLAAQTLAGTAQMVLTSDKHPAQLR
                     QEVTSPGGSTIAGVVALEKEGFRYAIIKAVAAALKKTRKLGKK"
     gene            complement(23418..23822)
                     /locus_tag="AC1PJC_000686"
     CDS             complement(23418..23822)
                     /locus_tag="AC1PJC_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HIP6619707.1"
                     /translation="MAGRKISPQSLKNLYQSNKEANQLTKESIETALLFLLEKKELKQ
                     ISVSELVRKAGVSRNAFYRNYKSKEEILEDYYERTSSNLKKKWHDLQDKVQKDGVKQS
                     FADFVQEQKRKAEQSKTLSNVSQWIKEKTKRD"
     gene            23949..24800
                     /locus_tag="AC1PJC_000687"
     CDS             23949..24800
                     /locus_tag="AC1PJC_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008289 - lipid binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HIP6619708.1"
                     /translation="MSKWKIVADSGCDYRQLANLAPDTEFISVPLTIQVGEQAFVDDA
                     SLDIDHMMEVMEASKSAAGSACPSPQAYQTAFEGAENIIVVTITGGLSGSFNAARVAR
                     DMYIEEHPNVNIHLIDSLSASGEMDLLVDEINRLIGAGLDFPQVVEAITHYREHSKLL
                     FVLAKVDNLVKNGRLSKLVGTVVGLLNIRMVGEASAEGKLELLQKARGHKKSVTAAFE
                     EMKKAGYDGGRIVMAHRNNAKFFQQFSELVKASFPTAVIDEVATSGLCSFYAEEGGLL
                     MGYEVKA"
     gene            complement(24891..26150)
                     /locus_tag="AC1PJC_000688"
     CDS             complement(24891..26150)
                     /locus_tag="AC1PJC_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HIP6619709.1"
                     /translation="MKKYQVIIQDILTGIEEHRFKRGEKLPSIRQLSEQYHCSKDTVQ
                     KAMLELKYQNKIYAVEKSGYYILEDRDFQDHTVELNPADFQELPYEDFRICLNESLIG
                     RENYLFNYYHQQEGLAELISSVQSLLMDYHVYTKKDQLVITAGSQQALYILTQMETLA
                     GKTEILIENPTYSRMIELIRHQGIPYQTIERDLDGIDLEELESIFQTGKIKFFYTIPR
                     LHNPLGSTYDIATKTAIVKLAKQYDVYIIEDDYLADFDSSHSLPLHYLDTDNRVIYIK
                     SFTPTLFPALRIGAISLPNQLRDSFIKHKSLIDYDTNLIMQKALSLYIDNGMFARNTQ
                     HLHHIYHAQWNKIKDCLEKYALNIPYRISKGSVTFQLSKGILSPSVQHMFGKCYYFSG
                     QSADFLQIFFEQDFADKLEQFVRYLNE"
     gene            26273..27007
                     /gene="yaaA"
                     /locus_tag="AC1PJC_000689"
     CDS             26273..27007
                     /gene="yaaA"
                     /locus_tag="AC1PJC_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HIP6619710.1"
                     /translation="MKIIIPNAKEVNTNLENASFYPLSDRSKQVLDAISQFDVKKMAA
                     FYKLNEAKAELEADRWYRIRTGQAKIYPAWQLYDGLMYRYMDRRDIDSKEENYLRDHV
                     RIATALYGLIHPFEFISPHRLDFQGSLKIGNQSLKQYWRPYYDQEVGDDELILSLASS
                     EFEQVFSPQIQKRLVKILFMEEKAGQLKVHATISKKGRGRLLSWLAKNNIQKLSDIQD
                     FKVDGFEYCASESTANQLTFIRSIKM"
     gene            27109..28554
                     /locus_tag="AC1PJC_000690"
     CDS             27109..28554
                     /locus_tag="AC1PJC_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0070726 - cell wall assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HIP6619711.1"
                     /translation="MKKRSGRRKSSKLKLINFALWGLYAITLCLFLVTMYRYNILDFR
                     YLNYIVTILLIGVAVLTGLLMWRKKARVFTALLLVFSLFITSVGVYGMQEVVKFSTRL
                     NSNSTFSEYEMSILVPANSDITDVRQLTSILSPAEYDQDNITALLENISKMESTQLVT
                     SPATSYLTAYQSMINGESQAMVFNGVFTNILENEDPDFSSKVKKIYSFKVTQTVETAT
                     EQVSGDSFNIYISGIDAYGPISTVSRSDVNIIMTVNRATHKILLTTTPRDSYVAIADG
                     GQNQYDKLTHAGIYGVNASVHTLENLYGIDISNYIRLNFTSFLQLIDLVGGIDVENTQ
                     EFTSRVGGYYFPVGQVHLNAEQALGFVRERYSLEGGDNDRGQNQEKVIAALIKKLSSP
                     DNLVNYQAILTGLEGSIQTDLSLETIMGLVNTQLESGTQFTVESQALTGTGRSDLSSY
                     AMPGSQLYMMEINQDSLEQAKAAIQSVLVEK"
     gene            28572..29261
                     /locus_tag="AC1PJC_000691"
     CDS             28572..29261
                     /locus_tag="AC1PJC_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0061097 - regulation of protein tyrosine
                     kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YveK family protein"
                     /protein_id="HIP6619712.1"
                     /translation="MNNQEVNAIEIDVLFLLKTIWRKKFLILLTAVLTAGLAFVYSSF
                     LVTPQYDSTTRIYVVSQNVEAGAGLTNQELQAGTYLVKDYKEIILSQDVLTQVATELN
                     LKESLKEKISVSIPVDTRIVSISVRDADPNEAARIANSLRTFAAQKIVEVTKVSDVTT
                     LEEAVPAEEPTTPNTKRNILLGLLAGGILATGIILAMEVLDDRVKRPQDIEEVMGLTL
                     LGVVPDSKKLK"
     gene            29271..29954
                     /locus_tag="AC1PJC_000692"
     CDS             29271..29954
                     /locus_tag="AC1PJC_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001086095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein kinase"
                     /protein_id="HIP6619713.1"
                     /translation="MATLEIARTKREIVNKTEEYFNAIRTNIQLSGADIKVVGITSVQ
                     SNEGKSTTAASLAIAYARSGYKTVLVDADIRNSVMSGFFKPVTKITGLTDYLAGTTDL
                     SQGLCDTDIPNLTVIESGKVSPNPTALLQSKNFENLIATLRRYYDYVIVDCPPLGLVI
                     DAAIIAQKCDAMVVVVEAGNVRRSAVKKVKEQLEQTGTPFLGVILNKYDVVTEKYGEY
                     GNYGNYGRK"
     gene            29995..30726
                     /gene="cps4B"
                     /locus_tag="AC1PJC_000693"
     CDS             29995..30726
                     /gene="cps4B"
                     /locus_tag="AC1PJC_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein
                     Cps4B"
                     /protein_id="HIP6619714.1"
                     /translation="MIDIHSHIIFGVDDGPKTIEESLSLIGEAYRQGVRYIVATSHRR
                     KGMFETPEKVIMTNFLQLKEAVAEVYPEIRLCYGAELYYSKDILSKLEKKKVPTLNGS
                     RYILLEFSMNTPWKEIQEAVNEVTLLGLTPVLAHIERYDALAFHAERVEELIDKGCYT
                     QVNSNHVLKPALIGDRAKEFKKRTRYFLEQDLVHCVASDMHNLSSRPPFMREAYKLIT
                     EEFGKDKAKALLKKNPLMLLKNQAI"
     gene            30756..32582
                     /locus_tag="AC1PJC_000694"
     CDS             30756..32582
                     /locus_tag="AC1PJC_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HIP6619715.1"
                     /translation="MDFGTVTDKLLERNSKRLILMCMDTSLIIVSMILSRLFLDVIID
                     IPYERFILAVLFVLIFYLIISVRLKVFSLITRYTGYQSYVKIGLSLISAYSLFLIISM
                     ILWQTFSYRFILVSLFLSYVMLITPRIVWKVLHETRKNAIRKKDSPLRILVVGAGDGG
                     NIFINTVEDRKLNFEIVGIVDRDPNKLGTFIRTAKVLGNRNDIPRLVEELAVDQVTIA
                     IPSLNGKEREKIVEICNTTGVTVNNMPSIEDIMAGNMSVSAFQEIDVADLLGRPEVVL
                     DQDELNQFFKGKTILVTGAGGSIGSELCRQIAKFTPKRLLLLGHGENSIYLIHRELLE
                     KYQGKIELVPLIADIQDRELIFSIMAEYQPDVVYHAAAHKHVPLMEYNPHEAVKNNIF
                     GTKNVAEAAKTAKVAKFVMVSTDKAVNPPNVMGATKRVAEMIVTGLNEPGQSQFAAVR
                     FGNVLGSRGSVVPLFKEQIRKGGPVTVTDFRMTRYFMTIPEASRLVIQAGHLAKGGEI
                     FVLDMGEPVQILELARKVILLSGHTEEEIGIVESGIRPGEKLYEELLSTEERVSEQIH
                     EKIFVGRVTNKQSDIVNSFINGLLQKDRNELKDILIEFAKQE"
BASE COUNT         9689 a         6170 c         7555 g         9239 t
ORIGIN      
        1 gtttctgatg aaacacacat ttggaaaaac agttgttaca cttcttgcaa gtaccgtttt
       61 attggctgct tgtggctcaa aaaatactgc ttcaagccca gattatgaat tgaaagatgt
      121 tcaattcccg cttgaaaaat cagttacgct taagttcatg acagctagtt cacctctagc
      181 tccagcagat ccaaatgaca agttgatttt ccaacgtctt gagaaagaaa cgggcgttca
      241 tatcgaatgg accaactacc agtctgactt tggtgaaaag cggaacttgg acattgcttc
      301 aggtgatttg ccagatgcca tccataatga cggggcttct gatgtggaat tgatgaactg
      361 ggcaaaacaa ggggttatcg taccagttga agacttgatt gacgagcata tgccaaacct
      421 caagaaaatt ttggatgaaa atccagagta ccgttccatg attacagcac cagacggaca
      481 tatctactca ttcccatgga ttgaagaatt gggcgaaggt aaggaatcaa tccacactgt
      541 taacgatatt gcttggatca acaaagaatg gttgaacaaa ctcggtcttg aaatgccaaa
      601 aacaacggat gacttgatca aggtcttgga agccttcaag acaaaagatc caaacggcaa
      661 tggcaaggcg gatgaaatcc caatgggatt catcaatggc ggaggaaatg aagacttcaa
      721 aattcttttc ggggcattcg gtgttggtga taatgatgat cacttagttg ttagcaatga
      781 cggaactgtt gacttcacag cggacaatga agactacaaa gaaggtgttg aatttatgcg
      841 tacccttcaa gaaaaaggtc ttctagatcc ggaagcgttt gaacaagatt ggaatactta
      901 cattgccaaa ggtagtgaaa atctatatgg tgtttacttc acttgggata aagctaacat
      961 tacaggtatg aacgatactt atgatatctt gcctgtgttg gcagggcctg acggaaccaa
     1021 gcacatcaca cgtacaaacg gtatgggctt ccagcgtgac cgcatggtta ttacctcggc
     1081 aaataaaaac ttagaactaa ctgctaaatg gattgatgcc caatacgctc cgctccaatc
     1141 tgttcaaaat aactggggta cctatggcga cgaaagccaa caaaatatct tcgaatatga
     1201 tgcagctaca gatagcttga aacacttgcc gttgaacggt actgcaccgg gcgaattgcg
     1261 tcagaagaca gaagttggtg gaccacttgc tattcttgat gaatactacg gaactgtgac
     1321 aaccatgcca gacgatgcta aatggcgttt ggacttgatg cacgcaacct atcttgacta
     1381 tgtaacaaac gatgatattt accctcgcgt cttcatggaa caagaagatt tggacaagat
     1441 tgcccaagtt gaagcagata tgaacgactt catctaccgc aaacgcgcag aatggattgt
     1501 aaacggtggt atcgaagaag agtgggatag ctacttgaaa gaattggaaa gctatggtct
     1561 ttctgactgg ttagctatca agcaaaaata ctacgatcag tacaaagaaa atcagtaatc
     1621 aaaaggaggc tgcctgtgaa aacagttgaa aaagccaatg catatattca gacagaaaaa
     1681 ggaaacgtca atccgatttt caaaccgcaa gcccatttaa caccagaaac aggctggata
     1741 aacgacccca atggatttat ctacttccgt ggagaatacc atttgttcta ccaattcaac
     1801 ccttacgaaa gtgtttgggg accgatgcac tggggtcatg cgaaaagtaa ggacttggtc
     1861 aactgggaac accttccagt tgcccttgct ccagacaagg actacgataa ggacggctgt
     1921 ttctcgggct ctgccattgt caaagatgat gttctatggc tcatgtatac cggtcatatc
     1981 aacaatgaag acgggacagt tagtcaagtt cagaatatgg ccttctcgac tgacggtatt
     2041 cactttgaaa aaatcgagca gaatccagtt gcaacagcag atggactgcc agaagaagtg
     2101 attgccaatg acttccgcga tccgaagatt tttgagaaag atggtcacta ctactctgtt
     2161 gtcgctacca agcacaagga caatgtcggc tgtatcgtct tactcagctc tcccaacctg
     2221 acggattgga aatttgagtc catcttcttg aaaggtgagg ccaaccaagg ctttgtctgg
     2281 gaatgtcctg actactttga agtggacggt caagagtacc tgattatctc tccaatgcgt
     2341 taccaaaaag acgggaatga ctttatcaat atcaattcca acatctttgt gacaggtcat
     2401 gtggactggg ataagaaagt ctttgtggca gattccttta aggaaattga ccacggacat
     2461 gacttctacg cagctcagac taccgaaggt ccagaaggcg aacgtgtcat ggtagcctgg
     2521 atgcacactt ggggacgcaa gttggtgacc aatgacctag gccataagtg gtatggtcaa
     2581 atgaccctgc ctcgtctact taagcaaggt gagaatggac tcagacaggt cttgccagaa
     2641 ggtatcttga acagctttga cgacattgaa atcggtcaag ttattcaagg accaagtaag
     2701 ctttccctca aactggacga cagtctagac ttgaaactgg ggactgaccg agactatctt
     2761 caatttggct atgataaagc caaacaagaa gtctatattg accgtagctc tctcaaaatc
     2821 cagcaagttg gtgaggagga atggtcaact gttcgtcgag cggtcacggt tcaagcgaca
     2881 gagctagagg tcttggttga caccaactgt ttggaaatct ttattaacga tggtcaagaa
     2941 accttgacat caaccttcta cgtagaaggt cagattattc taaacgctct ataatattat
     3001 ttgccctctt aaattattct ttcactccaa gagaaaccct gtattttcag ggttttttct
     3061 atcatgaaaa ttcttcccaa ttatgataga ataaagagat tgagaaagtt gaggtatcta
     3121 tgagaaagac aagtaaaaaa ggaaaggcta cgaggcgacc aaccaaggca gaattagcac
     3181 agcaagaacg tgttaaaaat atcacccttc gagtattggg gcttttattc attgcctttg
     3241 cagccagtcg cctaggtgtg tttggagtga ccagctacaa tattttccgg ctattatttg
     3301 gtagtctggc ctatctatta ttggcgggtg catttatcta tcttcttatt cccaaagtct
     3361 tacgcgaaag agaagggacc atatcgggct tctggctgat tgttatcggg ttattgattg
     3421 aatttcaggc ttacttagac tggacctatc aagggagtga cttattcggt catactctaa
     3481 aattggcctt gtcagaccta gctaagtttc aggtaacagc atttctaggc ggagggatga
     3541 ttggaagtat cttctatctg ccagtctcct tcctctttgc aaatgtcggt tccttcttca
     3601 tcggtcttct agtgatagca tttggtatct tttttgtaag cccatggtct gtttatgatg
     3661 ttgccgatgg cttggcggtt gccaaagaca agttggtgga gacgcaggta aaaagagcag
     3721 agcttcgaac acagaagaag gctgaacgag aagaaaaacg tcagcaagaa ttagctcgtc
     3781 tagaagagga acgccttcgt ctagaggaag aggaagagtc agctcgggct ttggcactgg
     3841 tagatagaca tgtcgattta gaaacgggtg aaatcctcga agaagagcct gttcaagtac
     3901 cgattatttc agaatatgac cacttagaca tagaagatga atttcctatt atgttggcag
     3961 aagatgacca accagcacaa tcaaactcgg caagccagga ttctgaacca aatgagtttg
     4021 agaaggacga gacagatgtg cagattgatt tcaagcctaa gcagagacta gcatataaac
     4081 ttccgtccat agacttattt gctcctataa aagctaagag tcagtccaat gaaaaacgaa
     4141 ttgttcgtca gaatattaaa gttttagaag acacctttgc cagttttgga atcaaggtag
     4201 tagttgagcg tgctgagatt ggaccatcgg taaccaagta tgaagtcaaa ccagcagtcg
     4261 gcgtccgtgt caatcggatt tctaacctgg ctgatgattt ggctctagct cttgcggcta
     4321 aagatgtccg tattgaagct cctatcccag gaaaatctct ggtcggtatt gaagttccaa
     4381 actccgaagt agctacagta cctttccgtg agctctggga acaatctaaa acagacccag
     4441 acaagctttt ggaaattcct ctcggtaagg ctgtcaatgg ctccgtccgt tcctttaacc
     4501 tagcacgtat gccccatcta ttagtggctg gttcaactgg ttcagggaag tctgttgctg
     4561 tcaacggtat catctcttca attctcatga aagctggtcc agaccaagtt aagttcatga
     4621 tgattgaccc caaaatggtc gaattatcgg tctataatga tattccccac ctattgattc
     4681 ccgttgtgac caacccacgc aaggctgctc gagctcttca aaaagtagtg gatgaaatgg
     4741 agaaacgcta tgagttgttt agccaaattg gtgtccgaaa cttagaaggt tataatgcga
     4801 aggtcgaaga atttaatagt cgttcagaag aaaaacagat tccacttcct ctcattgtgg
     4861 taatcgtaga tgagttggca gacttgatga tggtagccag caaggaagtg gaagatgcca
     4921 ttattcgctt gggacagaag gctcgtgcag caggtatcca catgattctt gctacccagc
     4981 gaccatctgt tgatgttatt tcaggtttga ttaaagccaa tgtaccatct cgtatcgcct
     5041 ttgccgtatc aagcggtaca gatagtcgga cgattctaga tgaaaacggt gctgaaaaac
     5101 tcttaggccg cggtgatatg ctatttaaac cgattgatga aaaccatcca gtccgcttgc
     5161 aaggttcttt tatatccgat gatgatgtag aagcaatagt tggctttatc aaggatcagg
     5221 cagatgcaga ttatgatgaa tcctttgatc caggtgaagt ggcagaaggt gatggcgatg
     5281 caggttttgg tgatgctgga ggagatccac ttttcaacga agcacgtgcc ttggtagttg
     5341 agacacaaaa agccagcgcc tctatgattc aacgacgctt gtctgttggt tttaacaggg
     5401 caacacgcct catggaagag ctagaagcag cgggtgtcat tggtccagct gaaggaacaa
     5461 aacctagaaa ggtattggaa acacaataat gaaatttgat gcagttcatc atattgcaat
     5521 tatcggtagt gactatgaca aaacaagaga attttatgtt gagaaactag gctttgaaca
     5581 ggtggatgag catattcgcc cagaaaaaaa tgatattctc ttcaatgtca aaaaaggcaa
     5641 tctgatcttg gaaatcttca tcaaaccaga tgcaccaatg cgtccggcca tgcccaatcc
     5701 tgaacataca ggtctacgcc atctagcttt ccaggttgca gatgtggaag cctgtctgga
     5761 agagtttgac cgtataggca tccgacatga agttctgcga acagatgatt ttgatggtaa
     5821 aaaaatggcc ttcttctttg atccagatgg cctccctcta gaaattcatg aataagtcca
     5881 tcttttcatg tccagagagg actttcaata tgacaactaa ttaatactct tagaaaatca
     5941 aaatcatacg ctgttgactt gatttgatga aggtcagttc tatctatagt catttgaatt
     6001 aactttgata catcgtcact ttcggcttgc cgtactctgc agaagtgact tgctttgcaa
     6061 gttatatctc caacctagca cagccactag gctgtgctag caacctgcgc ctcagttcct
     6121 tgtctgaaag ctaattcatt cgactataca tctacgtcgc cttgtctgat ttagtataaa
     6181 aagaatcccc gctgcgcctg caatggggat tcattatgcc atctatgaaa ggatggatga
     6241 ttttaggatt ttaaagtgaa gaccgcaata accaaagcta ggtacatcaa aaaggtcaag
     6301 ataaaactag ctcgccagaa aaccttgaag aaacggcggt ataaaaaatt ctttttcttt
     6361 aaaaggaaga aaccacaaag accaatcgcc agtagtgaga gggctaggac aagctgaggc
     6421 agtagactgt tatagtaggc cttgtccgaa atcagataaa attcaattgc atagagagga
     6481 aaggcaatgt ctgcaaagtt ccatcctcgg ttttgcagcc taaaaaactt gacagcaatt
     6541 atcgaaatgg ccaaggttag aaagataaat agaaaggcta ctatttttaa aaatataatc
     6601 gattcaaaca tacattcatt ctataaaaaa tgtgaaaaaa agtaaaccta aagcttgcat
     6661 ttctttgaaa ttcgtgtata atgaaaaggt atgtgtaaaa cacatatttg tgggaggtaa
     6721 aaatctttaa ttaccgccaa aaccacaata ggaggatttt atatcatggc taaaaaagtc
     6781 gaaaaactcg taaaacttca aattcctgca ggtaaagcta ctccagctcc accagtcgga
     6841 ccagcacttg gtcaagcagg tatcaacatc atgggattca caaaagagtt taacgctcgt
     6901 acagctgacc aagctggcat gatcatccca gtagttatct ctgtgtatga agataagtca
     6961 ttcactttca tcactaaaac accaccagct gctgttcttt tgaaaaaagc tgcaggtgtt
     7021 gaaaaaggtt caggtacacc aaacaaaact aaagttgcaa cagttactcg tgcacaagta
     7081 caagaaattg ctgaaactaa aatgcctgac ttgaacgctg catctcttga agctgcaatg
     7141 cgtatgatcg aaggtactgc tcgttctatg ggattcactg ttactgacta agtagcaccc
     7201 aagattatct gattacaagg agacatataa catggctaaa aaaagcaaaa acttgcgtgc
     7261 tgctcttgaa aaaatcgaca gcacaaaact ttacagcgta gaagaagctg ttgctcttgc
     7321 aaaagaaact aacttcgcta aatttgatgc gtcagttgaa gttgcttaca acttgaacat
     7381 cgacgtacgt aaagctgatc aacaaatccg tggtgcaatg gtattgccaa acggtactgg
     7441 taaaacttca cgcgttcttg ttttcgcacg tggtgctaaa gcagaagaag caaaagctgc
     7501 tggtgcagac tttgttggtg aagacgacct cgttgctaaa atcaacggtg gttggttgga
     7561 cttcgacgtt gttatcgcaa ctccagatat gatggcagtt gttggacgtc ttggtcgtgt
     7621 acttggtcca cgtaacttga tgccaaaccc taaaactggt acagtaacaa tggatgttgc
     7681 taaagcagtt gaagagtcta aaggtggtaa aatcacttac cgtgctgaca aagcaggtat
     7741 cgtacaagct cttatcggta aagtatcatt tgacgctgac aaactcgttg aaaacttcaa
     7801 agctttccac gatgtaatgg ctaaagctaa accagctaca gctaaaggta cttacatgac
     7861 ttcagtatca atcacaacaa cacaaggtgt tggtatcaaa gttgatccta actcacttta
     7921 atcaatagaa agattgtctt agggcaatct ttttttcttg agattttctt gacaagcact
     7981 tgatttcgat ttatactata ttcaatttac ataaaaggag ttatccgatg aaagtagcag
     8041 agaaagaaga gctttataaa tacctttctg cagcctacaa ccttccgcag gaagcatttt
     8101 cagaagccct gcgtgaaaaa atattggagg tggcaggtca gttggacaag gaggaaaatc
     8161 tctatatact ggcaggacac ttaagtcgct ttatcaatgc agagttaaca gctctgactt
     8221 gccgagcgcc taaggaattg gtgcaactag cccattacct tcaagaggtt caaaaccaat
     8281 atcgctatgc cagtcttttt ccaggaaagg taaaatagga gaaaacatga cagaatatac
     8341 aaaaccactc gtttggaagt gggaagatga aaatgacaac cgatctggca accgtccaac
     8401 agcaggcagt cgctttgagc aagacctacc aaagggagag aagcctttcc aagtctattc
     8461 attggggact ccgaatggca ttaaggttgc tattatgttg gaggagttga aagagttagg
     8521 tatttcggaa gctgattatg acctctttct catcaatatc ggtcaaggag atcaatttgg
     8581 ctcggatttt gttgccatca accccaactc caaaatacca gctatggtag attattccga
     8641 gcaagaaccg atttcggtct ttgaatcagc caatattctc ctctacttgg cagaaaagtt
     8701 tgacgccttc ctaccaaaag cctgggtaga gcggacagag gttcttaatt ggctcttctg
     8761 gcaaactggc gccgctccat ttgttggtgg aggatttgga catttcttcc attacgctcc
     8821 gacagcgcaa gaatatccga ttaatcgcta tacaatggag accaagcgtc agctggatct
     8881 cttggatcga ctattggcga caagagaata tgtagctgga agtacctata ccatcgcaga
     8941 tattgctatc tggtcttggt atggtcgctt ggttcaagga gaactatatc caggttcagc
     9001 agaattttta gatgttgatt cttacaagca tctaaagtcc tgggtagaga aaatagccca
     9061 acgcccagct gtacaacgag ggttgacagt gaaatatcat tcaattgata attaattgac
     9121 ttgcccacct tatgggtggg tttttctttt actttggtat gataaaagtt tataatgaaa
     9181 gagttagact ttgtgaaaat ccaaaaatag aaattaataa ttgatactca atgaaaatca
     9241 gaattagact aggcgacgta gatgcagata gaactgaagt tcatcaaatc aagtcaacaa
     9301 cgtctgattt tgattttcga agaatatgag tttttcctgt cttatattta catagaaagt
     9361 aatagaaaaa tgtccgaaaa agttgaaatg cagcagtcca aagaacaggc gacaatggcc
     9421 agaggcttgg cttggttgac tgctggaaat attcttagtc gcctgcttgg tgttgcctat
     9481 gttattccct ggtatatttg gttaggggag tatcgagctg aagccaatgc cctctttagt
     9541 atggggtatc aaatctatgc caacttctta ttgatttcaa cagctggtct tccgacagct
     9601 attgccaaac aagtagctaa atacaatgtc ttgggtaaag aagaggtgtc gctctacttg
     9661 gtcagagaat tcttcaagct catgttggtc tttggagctg tctttgcagg ggtcatgtat
     9721 ctaagtgctc cgtggttggc agacgcatcg gggtcgaagg aaaagttact tccagtcatg
     9781 tatagtctag tcccgcctct ctttatcttc ccagccatga gtatcttgcg tggttttttc
     9841 caaggtcggc acgatatgaa gccctatgcg atcagccagc ttgcagagca actggtacgg
     9901 gttatctgga tactggcagc aacatttatg attatgaagt tgggtagcgg tgactatctt
     9961 gaagcggttg tccaatctac ctttgcagct tttgtcggga tgattgctag tgttgggatt
    10021 ttagtttata ctttatggaa gcaaggttac cttggtaagt tgcttcatgc taagaaacaa
    10081 aagatttctt tggatacagg tcaacttatt aaggaaactg ttcgagatgc gattccaatt
    10141 atcattttag gtctaacgat tcaattattg cagtttattg accaagtcac gtttattcgt
    10201 gttatggaaa gaattacgga ttacagtaat tcggaacttt tggaacttta ttcatatatg
    10261 gctgccaatc caagtaagat tacgatgatg attatcggga tttcactgag tttgggaagt
    10321 gttgctattc cattgattac agagaaattt gtcaagaaag atttgaaggc ggcgtctcat
    10381 ttagtggcgg ataatctaca attactcttt atattcacta taccggcaat tgttggaacg
    10441 gtcctgttag ctgggccgct ttatacgatt ttttacggac cgtcagagcc tatcgccatt
    10501 actctattta tttggaactt atttttaatt ttacctctgg gactatattc tgtcattagt
    10561 gtggtcattc aagcgatatt tgaaaataga agagccattt attatttctt gattgggatg
    10621 ctagtgaaaa tcgttttaca agtaccaatg atctatgtct ttaaggtata tggtagcttt
    10681 atctcaacga tatttgggtt gggaattatg ctgtacctct tctatagacg aattgacaag
    10741 gttctgcata ttgatgaaag actagtgata aaagatattg cgaccattag ttggatttct
    10801 atcgtaatgg gattcattgt atgggggatt gaatttgtct tgaatcttat ccttccagca
    10861 aatggctatg tatctagctt tatccacttg gctattgcag gtggagcagg tatgcttgtc
    10921 tttgtcatct tgacattgaa gactcgtcag ctagatcgtt taattggaag tcgggctcag
    10981 agtttacgga ggaaattgcg cctaggctag tttgttttaa agatctctat tttctactat
    11041 tgaaaagctg ggaaaaagag gcgttttaga atgtgagaag gaaagttcgt tgaggatttt
    11101 ccttttttct tggagatttc agtataaaaa aaacggtttt tgtggtagaa tagtagggat
    11161 aaaaaagagg agagagatga tgaaacctaa atacgaacgt attctaatca aactatctgg
    11221 tgaggccttg gctggtgaac gtggtgtcgg tattgacctt aaaactgttc aggaaatggc
    11281 aaaggaaatt caggaagtcg cagaatcagg tattcagatt gcccttgtta ttggtggtgg
    11341 taacctttgg cgtggagaac ctgctgctga agcgggtatg gatcgagttc aagcagacta
    11401 tacaggcatg ttggggactg ttatgaatgc tcttgtaatg gctgattccc ttaaacagct
    11461 tggtgtggat acacgtgtgc agacagcgat tgcgatgcag tcagttgcag agccttatat
    11521 tcgtggtcgt gctcttcgtc atcttgaaaa aggtcgcatt gttatttttg gagctggtat
    11581 tggttctccg tacttctcaa cggatacgac agcggctctt cgtgctgcag aaattgaagc
    11641 ggatgcgatt ttgatggcta aaaatggtgt ggatggcgtc tacaatgctg atccgaagaa
    11701 agatgctaat gcagttaaat tcaatgaatt gacccaccgt gaagtgatta gtcgtggttt
    11761 gaaaatcatg gatgcgacag catcaactct ctcaatggac aatgatattg atttggtcgt
    11821 gttcaatatg aatgaaccag gaaatattaa acgtgttgtc ttcggtgagc caatcggtac
    11881 taccgtttca aattcttcag aagaaaaata aatcatatcg tcatttagtt tttcttttat
    11941 tacttcgtta attcgccttg tctaacttcg gttatgcctg tggctcgttg cctagtacta
    12001 aaagtaaact aaaagactgt aaaaaaatac aaagaaggaa gtcttatgtc taaagaaatt
    12061 attgctaaag cgcaagagcg catgaatcaa tctcatcaga gtttggcacg tgaatttagc
    12121 cacattcgtg ctggccgtgc caatgctagt ttgttggacc gtatttcagt tgagtactac
    12181 ggttctccaa cgccattgaa ccagttggct ggtattacag tgccagaagc gcgtgttcta
    12241 ttgataacac ctttcgacaa gtcaatatta aaagatattg agcgtgcttt aaacgcatct
    12301 gatcttggtt tgacgcctca atctgatggt actgttatcc gtttggttat tcctgccctt
    12361 acagaggaaa ctcgtaagaa tttagcgaag gatgtgaaaa aagtgggtga gaactctaaa
    12421 gttgctatcc gcaatatccg tcgtgatgcc atggatgaag caaaaaaagc tgaaaaagca
    12481 aaagaaatca ctgaagacga attgaagtca cttgaaaaag atattcaaaa agtaacagat
    12541 gatgctatca aaataattga taaaatgact gccgacaaag aaaaagaatt gttggaagtt
    12601 taatcaacac gtttttagac tacaacaaca aatcatcacc gggctgtcta acttccagtg
    12661 gtgaaccaat aagaaatcta atggggggag ttagacaaga cttcccccac tttttaatca
    12721 gaaagaagaa aatcatgaat gatttattag cacagtatat cgttggttta gtgactgacg
    12781 aaaacgatca gttttacttt gtccaaaaag aggggagaac ctttgctctt tctaaggatg
    12841 aaggagaaca tagtctaggt caatctgtta agggatttgc ctataccgat atgaaacaaa
    12901 aactccgttt gacaactaag gaagttgggg cgagtcgtac cagctttggt tggggaactg
    12961 tcacagaggt acgtaaggat ttgggtgtct ttgtggatac aggtctgcca gacaagcaag
    13021 tggttgtttc cttagacatt ttgcctgaaa tcaaggaact ctggccgaaa aaaggggatc
    13081 agttgtacgt caaattagac gtcgataaga aggaccgcat ttgggctctg ccagcttttc
    13141 aggaagattt tcagaaaacg gctggacctg cctatgacaa tatgcaaaac caaaatctgc
    13201 gagcgattgt ctatcgtttg aaaatgaatg gtacttttgt ttatttgcca gacaacaaca
    13261 tgcttggttt tatccatccg agcgaacgct ttgcggaacc acgtttgggt caggttttag
    13321 aggcgcgtgt catcggctac cgtgcagttg atcggacctt gaacttgtct ctcaagccac
    13381 gttcatttga gatgctggaa aatgatgccc agatgatatt gacttatctg gaaagcaatg
    13441 gaggcttcat gaccttgaac gataagtctg ctccggaaga catcaaggcc acctttggta
    13501 tttccaaagg gcaattcaaa aaagctcttg gtggtttgat gaaggctgga aaaattaaac
    13561 aggattcttt gggaacagag ttggtgtagg gggcgtctat gctagtttat attgctggta
    13621 gtggggcaat ggggtgtcgg tttggttatc aattgtctaa gacaaatcat gaagtgattt
    13681 tgttggataa ttgggaagag catatcgaag cgattcgaga aaacggcttg aaagtgactg
    13741 gagatgtaga ggaaactgta cacttaccca tcatgaaacc gaccgaagca acgagagaag
    13801 cagattttat cattctattg acaaaggctg atcagttgcc aaagatgttg cgggatatta
    13861 agccgattat cggtccaact accaaggttt tgagtctctt gaatggtttg gggcatgcga
    13921 cgaccatgcg tcggtacgtg ccagatgaaa gtattatggt tggggtgacc atgtggttgg
    13981 cgggactaaa gggtcctgga catgctcact tagaaggtcc gggttctatg tccgttcagc
    14041 atattcttgg tgatgagcaa tcagttgcgg atattattga aatgctgaat gaagctggac
    14101 taaatgtgac ctatgacaat catgttgtca gtgctatttg gcagaaagcc tgtgtcaatg
    14161 gtgtgatgaa tccaacttgt accattttag actgtacaat tggtgaatta tttggtacgg
    14221 aggctggatt gaatctagta caggggattt tcaaagaatt tattgctgtt gctaagtctg
    14281 aggcagatgg aattgacgaa gaagctattt ggaaatatgt tattgatgct tcgaagaagg
    14341 cttccaatca ctatccatct atgcaccagg atttggtcca acatggtcga aagacagaaa
    14401 ttgattatct gaatggagcg gttgttttta agggcaaacg tgcaggtatt cctacgccat
    14461 actgtcagat gataacagat atgattcatg ccaaggaaag tatgctgggg ttgagatagg
    14521 agaaagtcat gctgattgaa gtggaaacga ttgaagaata tatggctgtc ttgcctgaaa
    14581 atcggaagga agcagttgaa cgactccatc aagtgattgt ggaacagtta ccagctggtt
    14641 ttgaagtagg aatcttggga ggtatgatta actattatgt gccgcttgct gcctatcctg
    14701 atggttatca ttgcacaccg ggagagccct tgccattcct tgccttggca ttacaaaagg
    14761 cacacatcgc cctctaccac atgggaatct atatggacca agaattgaat gattggttcg
    14821 ttgctgctta tcaagcacag atgcctacca aactggatat gggcaagtcc tgtgttcgta
    14881 tgaaaaatcc caagaatatt ccttatgaat tgattgggga attggttagt aagatgtcta
    14941 tggagcgcta tatagagctc tacgaaaaaa atcatagaaa gtagatgtag tgagaagaag
    15001 tttttattct tggttgatga cccaacgcaa cccaaaaagt aatgaaccag tagctatctt
    15061 ggcagattat gcctttgatg aatctgattt tcctaagcaa tcagataatt tcgatgaagt
    15121 cagtcgtttt ttggaggaat cggccagctt tgccttttcc atgtctgatt ttgatgcgat
    15181 ttgggaagat tatttgggac attgatggat aaaatagtac aaaatagcct tgtttgggct
    15241 atttttgtta taatagagaa aagcacagga aaaggagcaa ctcttgctag aacattcaat
    15301 tgatattcaa ctcaagcatc cagatgattc atttagccta tttggttcga atgaacgcca
    15361 tctgagattg atggaacagg aactaggtgt ggttattcat gcccgtacgg aaaaagtgca
    15421 ggtgattgga caggaagaac atgtagaaca ggcgcgtctt gttatccagt ctctccttgt
    15481 cttggtgagt cgtggtttgg ttatcaatac gccagatgtg gtcacagcta tttccatggc
    15541 aaaaaatgat gagatagaga aattcgttgc cctctatgaa gaagagatta tcaaggacaa
    15601 ctatggcaaa cccattcgcg taaagactct tggtcaaaaa ctctacgtgg acagcgtaaa
    15661 gcgtcatgac atcgtgtttg gaatcggtcc tgctggtaca ggaaagacct tcttggcggt
    15721 tactctagct gtaacagccc tcaagcgggg acaggtcaag cggattgtcc tgacccgtcc
    15781 tgcggtcgag gcaggcgaaa gtttaggctt tttaccaggg gacttaaaag aaaaagtaga
    15841 cccctatttg cgtcctgtct atgatgccct ctaccagatt ttgggtaagg agcagaccac
    15901 gcgcctaatg gagcgcgaga ttatcgagat tgcaccgctg gcctatatgc gggggcggac
    15961 cttggaagat gcctttgtca tcttggatga ggcgcaaaat acgaccatta tgcagatgaa
    16021 gatgttcctg acccgtctgg gctttaattc caagatgatt gtcaatgggg atattagtca
    16081 gattgacctg ccacgcaagg ttaagtcagg tttaattgat gcgacagaga aactaagcaa
    16141 aattccacag attgatttcg tacatttttc agccaaggat gtggttcgtc atccagttgt
    16201 tgcccagatt atcaatgcct atgaagagga ggctcgggca gctgatagtc gagcaagttt
    16261 tgaaacgatt ggggagctga agcggagtga agaggatgga gattagtcaa ttttccactc
    16321 attataaagt gcgaaagata acagaagctg acttagagca ggttttggcc ctctaccaga
    16381 ccaaccccct ctattttgag tactttccgc ccttacctag tatggaaagt ttagccaatg
    16441 accttgtcga ctgtccgcca ggtaaggagc tatcagataa atattttcta ggattctggg
    16501 acaaagagcg attagttgcc atcttagacc taattgatgg ctatccgact gcagagattg
    16561 cctatatcgg actttttatg gtggattcaa gattggctgg tcagggtctt ggctcaaaga
    16621 tcatagcgga gctcctatct cagttagcaa gtcacttcaa aaaagtgcgt ctaggctatg
    16681 tagaaagcaa tcctcagtcc agtcattttt ggtccaaagt tggattttgt ccaactggtg
    16741 aggtcaaaga aatagctgga aaaacaatcg tcatagctga acatgcatta gatggataat
    16801 aataaaaaac tgcctggttc aatcagaact gggcagtact tattttacat tctaaaaaat
    16861 ggattgaaat ttttctcatg tccaacgctg gtgttttgac cgtgacctgg atggacagta
    16921 tagtggtttg gcagggtgaa gatgtgttcc ctgataccgg caatcaagtc gtcaaaattg
    16981 ctggtaggca ggtctgtacg tcccacagtt tcgcggaaaa gtgcgtcgcc agtgatgaca
    17041 cattcatcct ctgggaagat aaaggaaaca ccaccaatag agtgaccagg tgttggaact
    17101 accttgaaat gaaaaccgtc aaactggtag tcttcttggt attggaagat tttttcagca
    17161 ggtcggcaga ctacattttc catatcatca tgacgaggta gacctgatag attcatctct
    17221 ggtgtataga gccagctggc ttcactttca gccacataga caggtgggaa attgtaggtc
    17281 tcacgcagaa tgtccaagct cataatatgg tcatagtgag tgtgagtcag gagaatagcc
    17341 gaaattggtt ttccgatttt ttcgatagtt gcttgaattt ttgtccagtc actcccaggg
    17401 tcaatgataa tcagatgggt atcattttca aggtagtagg tattttgaaa agcgacagga
    17461 ttgacagatt tgtgaataat cattcttttt ccttcttcta acagttactg atgttactag
    17521 tctaacaaaa aaacacgtct tcttcatgga atttgtttgg agctttttcc atgagaggga
    17581 atatgctata atgaacagta tgaaagacac aagaacaagc aatcggtatg ccgttgtgga
    17641 tttggaagca actggtacag gtaccgatgc aaaaatcatt caaatcggga ttgttctcgt
    17701 tgaaaatgga gaaatcattg acagttacgc aacggacatc aatccctatg agctactgga
    17761 tgaccatatc aagaatctga caggtatcac agaccaacag ctaagtcagg ctccggattt
    17821 tggtcaggta gcaagtacca tttatgacat gattggagat gctatttttg tagcccataa
    17881 tgtcaaattt gatgccaatc tcttggcaga agcactcttt tttgaaggct atgaactgtt
    17941 gacgccacgt gtagatacgg tggaattatc acagctattt ttcccgactt ttgaaaaata
    18001 cagcttggga aatcttgcag agcatttgga acttggtttg gaccaggcgc acacggccat
    18061 atcagatgcc atggctacgg cgcgcttgct catcaaaatt caagagaaaa taaagagctt
    18121 acccaggtct attgttgaaa agattcttga tttggcggac aatctgctct ttgaatcccg
    18181 tctggtcatt gatgaaatgg tgcctgttct gtcagaaaac ctatcatacg atttagaatc
    18241 tattcatggc ttggtcttga aaaagccaga agaaatcaag tcggcctacc gattatctga
    18301 agatttttcg accaatattg cccttctcgg cttgcatgaa cgaaaaaaac aaactgcctt
    18361 cgctcaagta gtagaaaaac gcttggttga cgaagaaaaa gtgcatttta ttcaagcgca
    18421 ggcaggtttg gggaagactt acggttatct cttgccttta cttgctaagt cagaacggcc
    18481 tttattggtc accgtaccga ccaagctcct tcaagagcag attatggaaa aggaagggag
    18541 caagcttaaa gagatatttc gtattcccgt agtctctcta aaatcgccca agcattttat
    18601 caagttagac aactactgga aaaccctgca gaggcaggat gataatcgcc tggtcaatca
    18661 attcaaaatg caggtgcttg tctggttatg cgaaaccacg acaggtgatt tggatgagct
    18721 taagcaaaaa caacgctatc aagcttactt tgatgagatt gcccacgatg ggaaattgga
    18781 gcctgaaagt cttttttggg gcttggattt ttggcaacga ttgaaccaac aagctctctc
    18841 tagtagactg ctcattacca accacgctta ttttctcaac catcttaagg atcaagaccc
    18901 tctcatggat aagcgtctgg tggtgattga tgaagcacaa aagtttctct tggctgctga
    18961 aaatctagcg acggcttcgc aagatttgac aagtatgtta caagtattgc aaagtaaaaa
    19021 ggacagagcg acgactattt tggaccaacg tttgtatgag tcttgccagt ttgaactcaa
    19081 ccactttttg agtcgttttc gccagcatgg tcaacgagag gttcaaaagg ctgaacttca
    19141 tcaacttggt cagaacctgg aggagcttgg agatgttgat ttgaacgact tgcatcagct
    19201 catagactat tacgatacct tttggttgga ggagaaaaat ttagaagaaa agcggcttgc
    19261 ctatttgcgg ggctccaagg acagcctcct aaatgcgacc aactacctgc cagatactaa
    19321 gattttctgc atcagcgcca ccttgaccat cagcaaaaag gtcagtctgg cggatttgct
    19381 gggctttgag caggtcacct tggatttgat accgactcaa actgtgacca accagcagct
    19441 gctttttccg acccatctcc ctgacatcct cgcttggacc aaggaggagc atgcagctta
    19501 tttggctact actttaggag aaatagcaga gctgggacga ccgattttgg tcttgttcac
    19561 atcgatttct ctgctcttgc aggtgtcgga attgttagaa gacaataaca ttccccacct
    19621 agcccagcat aagcatggac aggaaatgac tctcaaacgc aaatttgaac gaggggaatg
    19681 ccaaatttta ctcggcacag gtgtattttg ggagggcgtt gactttgcca gtcagaatca
    19741 attgattcag gttattacaa ggctcccatt tgacaatcca aaggaccggt ttgtacaaaa
    19801 aatcaatcac catctgcgtg aagaagggaa aaatccattt tatgattaca gcctgcctat
    19861 gatgatgatt aagctcaaac aagccatcgg tcgtaccaat cgccatgaca aacaagattc
    19921 actagtcttg gttttggacc cgcgtgttca caccaaacgc tatggacagc aaattctgtc
    19981 cttctttgag aaagattatt caatgttaag tgtggatgcg aaagaaatag aaggagctat
    20041 tcaagatttt tttgaataag ttgaaaggga gccacaaggc ttccttttgt ttccagcgtt
    20101 tttttaatgc tactcatgat taggaatcta ttccctctct ccttgccgaa taacagtgat
    20161 tttctttatg attaaaatat ggtataattt tccaaatatt agtttttgtg agaagagatt
    20221 atgacaggaa aaacaattgt atttaaggtc gggacaagtt ctctgacgca agaaaatggc
    20281 agtctggacc gtatcaagat cgctcggatt accaatcagc tggctcagtt gcaccagaag
    20341 ggctaccaga ttgtgctggt gacgtcgggc tcgattgctg ctggttttcg gagattggga
    20401 tttgacaagc gaccgaccaa gattgcggag aaacaggctt ctgcggctgt tggtcagggc
    20461 ttgctgattg aggaatacac gcagaatctg atgaaagatg gcattgtgtc ggctcagatt
    20521 ttgctgaccc aggatgattt tgcggatgcc agacgctatc agaatgcctc tcaggccttg
    20581 caggtcttgc tgaagcaacg tgctattcct attatcaacg aaaatgatac cattgccatt
    20641 gaggagatta aggtggggga taacgatact ttatctgccc aagtggcttc tctcttgaaa
    20701 gcagacctct tggtgctctt gacggatgta gacgggcttt ataccgctaa tcccaacagc
    20761 gatccgactg cccagcactt gcctgaaatc aaggaaatta cggaagattt gttcgccatg
    20821 gcagcaggag caggctcgtc caacggaaca ggtggcatga ccaccaaatt gcaggcggcc
    20881 cagattgcga ccaagtcagg cgtgcccgtc tttatctgct cttcaaaaga ggataccgcc
    20941 ctcttacagg cggtcaccca agccaatcgt ggaacgctct ttttagcaga tgaccatgcc
    21001 atgaaccaac gcaagcagtg gatggccttc tatgctcgga cagacgcggc ggttgaagtg
    21061 gatgcaggag cggttgatgc catgttgcat caggggcgca gtttgttagc tactggtgtc
    21121 aaagccttcg aaggagactt tgaagtgggc caggtcgtag aggtttatag ccaagcagac
    21181 catcgtttga ttggtaaagg gcgggtcaaa ctgtcctcca aggacttgca ggaccagttg
    21241 gcaaatggca gagcagaggg cgtgttcatt caccgcaacg attgggtgag cttatagttg
    21301 ttcagtttgt ctcgattatg ttgacgaacg agtaaactga aagactaaat aggagaaaga
    21361 tatgacaaca acacaagcat tactagatag tttattggcc cacaaggctt ctatcaacct
    21421 agcgacaaca gaacagaaaa accaggctct atcagcaatg gcagaccagt tggttgctca
    21481 gactgaggca atcctagcag gcaatgccat cgatatggaa catgcccaag gcaagatcag
    21541 ccaggtgatg caggaccgtt tgctgctgac agaggaacga attgaagcca tggcagatgg
    21601 cattcgggcc ttgattggct tgccagatcc tgtcggatta gtcttggaag aatctactcg
    21661 ggcagacggc ttacatattc gcaagaaatc cattcccttt ggcttagtgg gtatgattta
    21721 cgaaagccga ccaaacgtga cttcagatgc cgctgccttg gccatcaaga gtggtaatgc
    21781 agtcatcttg cgtggaggca aggaagcctt tcattcggcc caggctatcg tcacagccct
    21841 caaagccggt ttggaagaag ttggcctatc acctaaggtc atcgagctag tccaagatac
    21901 cagccgtgcc tctgcgaccg agttgatgac tgccaaaggc aagattgacc tcttggtgcc
    21961 acgtggcggt gcaggactca ttcaagccgt cgttgaaaat gcgactgtgc cagttataga
    22021 aacaggaaca ggtatctgcc atgtctatgt ggacaaggat gcggacttgg acatggcctt
    22081 gcggattgtg gtcaatgcca aaaccagtcg tccctcagtc tgcaatgcgg cggaagtctt
    22141 gttggtccat gaagaaattg ccagccaatt cctacctcgc ttggaagaag ctctggcagg
    22201 tcaggtggag ttgcgtgcag acagtcaggt tcaggctctc ctcaaccaat ccacaccagc
    22261 aggcgaccaa gattttgaca cagaattttt ggactatatc ttggctgtca aagtcgtctc
    22321 aagtgtagaa gaggctatca gccacattgc tcaacactcg acaggacaca gcgaggccat
    22381 tgtgacggaa aacagccaga cggctgacct cttcacactc catgtggact cggcggcggt
    22441 ctatgtcaat gcctcgaccc gcttcacaga cggtggcgag ttcggtctgg gctgtgagct
    22501 aggtatttcc acccagaaga tgcatgctcg tggtccaatg ggcttgcgtg aaatgaccac
    22561 ttacaagtac atcatcacag gcgacggcca cattcgttag gaggacaaga tgaagattgg
    22621 atttatcgga ctgggcaata tgggggcggc attggctcat gcagtcagcc agctgccaga
    22681 aacccagctc ctcctcagca accataaccc agcaaaagcc caggctcttc aagagaaggt
    22741 aggcggtcag cttttttcta atggggaaat agcagagcag gccgaggtca ttttccttgg
    22801 ggtcaagcct cacctgattc agtcagtctt gtcaggctta caggaccaga ttagccagaa
    22861 tccgtcagcc atttggattt ccatggcagc gggcgtgacc cttgaaagcc tgtcagaata
    22921 tgtgtcggca gacaaactca tccgtatcat gcccaataca ccagtcgcta tcggccaagg
    22981 catgacgacc tatagcttgg tcaatcaaga gctcgctccg ctattggaac aaatcctaga
    23041 aaaatcaggc aatgtccaac aggtgccaga gagcctgatc gacgcagcaa cggctatcgc
    23101 aggttgcgga ccagcctttg tctatcagat gattgaggct ttgaccgatg ccggtgtgca
    23161 aaacgggctc acagctcaag atgccaaggt tttggcggcc caaaccctag ctggaactgc
    23221 tcagatggtc ttaaccagcg ataagcaccc agcccagctg agacaggaag tgacctcgcc
    23281 aggcggctcg accatcgcag gcgtggtagc tcttgaaaaa gaaggcttcc gttacgccat
    23341 tatcaaggca gtcgccgccg ccctcaaaaa gactagaaaa ttaggcaaaa aatagaagac
    23401 agcaaaaaac gggactttta atcccgtttt gttttttcct tgatccattg actgacgttg
    23461 gacagggttt tgctttgctc tgccttgcgt ttttgttcct ggacaaaatc tgcaaagctt
    23521 tgcttgacgc cgtccttttg aaccttgtcc tgcaaatcat gccatttctt tttaaggttg
    23581 ctggaagtcc gttcgtagta gtcttcaagg atttcttcct tggacttgta attgcggtag
    23641 aaggcattgc gtgacacacc agcttttcgg accaattcag ataccgaaat ttgcttgagc
    23701 tcctttttct ctaggagaaa tagcagagca gtttctattg attccttagt cagttgattc
    23761 gcttctttat ttgattgata gaggtttttc aaagattggg gtgaaatttt acgacctgcc
    23821 atagttttcc ttttccgagt gtcacatctg aaagaaaatg ctttcagatg gggtagttta
    23881 atgatataat tgtaagtaaa tagagattta ttgtcaaata aaaaagtaaa attggaaatg
    23941 agaatattat gtcaaaatgg aaaattgttg cagattcggg ctgcgactat cgtcaattag
    24001 ctaatctagc tccggacact gaatttatta gtgtgccact taccatccaa gttggagaac
    24061 aagcatttgt tgatgatgca agcttagata ttgatcacat gatggaggtg atggaagcat
    24121 ctaagtctgc agcggggtcg gcgtgcccaa gtccgcaggc ttatcagaca gcttttgagg
    24181 gagctgagaa cattatcgtt gtgacgatta caggagggct atcgggtagt tttaatgcgg
    24241 cacgtgtagc tagggatatg tatatcgaag agcatccgaa tgtcaatatc catttgatag
    24301 atagtttgtc agccagtggg gaaatggatt tacttgttga cgaaatcaat cgcttaattg
    24361 gtgcaggatt agattttcca caagtagtag aagcgataac tcactatcgg gaacacagta
    24421 agctcctctt tgttttagcg aaggttgata atcttgttaa gaatggaaga ctgagcaaat
    24481 tggtaggcac tgtcgttggt cttctcaata tccgtatggt tggtgaggca agcgctgaag
    24541 gaaaattaga gttgcttcaa aaggcgcgtg gtcataagaa atctgtgaca gcagcctttg
    24601 aagaaatgaa aaaagcaggt tatgatggtg gtcgaattgt catggcccac cgcaacaatg
    24661 ctaagttctt ccaacaattc tcagagttgg taaaagcaag ttttccaacg gctgttattg
    24721 acgaagttgc aacatcaggt ctatgcagtt tttatgctga agaaggtgga cttttgatgg
    24781 gctatgaagt gaaagcgtga ttcacagagt aacaattttg ggatgtaaat agaataatcc
    24841 ccctcgtctt ttaagttcga gggggattgt ttgtatgaga ctattggatt tcattcattc
    24901 aaatatctta cgaattgctc cagtttatct gcaaaatctt gttcaaagaa gatctgtaag
    24961 aaatcagcac tctgtccgct gaaataataa cactttccaa acatgtgttg aacgctagga
    25021 gaaagaatcc ccttgctcag ctgaaaggtc acgctccctt tggaaattcg atatgggatg
    25081 ttcaaagcgt atttctctaa acaatctttt attttattcc actgagcgtg ataaatgtga
    25141 tgaagatgct gtgtgttccg tgcaaacata ccgttatcaa tgtagagcga gagagctttt
    25201 tgcatgataa gattggtatc gtagtcgatt agactcttat gtttgatgaa ggaatcacgt
    25261 agctggttag gaaggctgat tgcaccgatt cggagggcag gaaagagtgt cggtgtaaaa
    25321 gattttatgt agatgacacg attatctgta tcaagatagt gtaaaggtag gctatgacta
    25381 gagtcgaaat ctgccaaata gtcatcctca atgatgtaga catcgtattg ctttgctaat
    25441 tttacgatgg ctgtttttgt tgctatatca taggttgaac cgagaggatt gtgcaagcga
    25501 ggaattgtgt agaaaaactt aatttttcca gtttggaaga tactttccaa ttcttctagg
    25561 tcaattccat ctaaatcccg ttcaattgtt tgatagggga ttccttgatg tcgaatgagc
    25621 tcgatcattc gtgagtaggt agggttctct atcaagattt ccgtttttcc agccaaggtt
    25681 tccatttgtg tgagaatata tagagcttgt tgactaccag ctgtgataac cagctggtct
    25741 ttttttgtat agacatgata gtccattaac agactttgaa cggaggaaat caattctgcc
    25801 aatccctctt gctggtggta gtagttgaat aggtaatttt cccgcccaat aagactttcg
    25861 tttagacaaa tccgaaaatc ttcatagggt aattcttgaa agtctgcagg attgagctct
    25921 acagtatggt cttggaaatc tctatcttct aagatataat aaccgctttt ttcgacagcg
    25981 tagatcttat tttggtactt taattccaac atagcctttt ggacagtgtc tttgctacaa
    26041 tgatattgct cgctgagttg acggatagaa ggtaatttct ctccacgttt gaatcggtgt
    26101 tcctctattc cagtcaaaat atcttggatg ataacttgat attttttcat ctaggccccc
    26161 ttttttatag actatgttac tagctagtat ataggaaaaa ttgaagaaag acaatatatg
    26221 aatgatgggg ttgaggttca ggaattaagc tactctatgg tataattaag tgatgaaaat
    26281 aattatacct aatgcaaaag aagtaaatac aaatctagag aatgcctcgt tttatcccct
    26341 gtctgatcga agcaagcagg tgctggatgc cataagtcaa tttgatgtaa aaaagatggc
    26401 tgccttttat aaattgaatg aagcaaaggc tgagttagaa gctgatcgtt ggtatcgaat
    26461 caggacaggt caagcaaaaa tctatccagc ctggcagtta tatgatggtc tcatgtatcg
    26521 ttatatggat aggcgagata tagattcgaa agaagaaaat tatctacgtg accatgttcg
    26581 tatagcgaca gccttatacg gattgattca tccttttgaa ttcatttcac ctcaccgctt
    26641 agattttcaa gggagcttaa agataggtaa tcagtctttg aaacagtatt ggcgaccgta
    26701 ttatgaccaa gaagttggtg acgatgaact gattctctca ctggcttcgt cagaatttga
    26761 gcaggtgttt tctccacaga ttcagaaaag attagttaaa attcttttca tggaagaaaa
    26821 agcaggtcag ctaaaagttc acgcgactat atcaaaaaaa ggtagaggaa gattactgtc
    26881 atggttggct aagaacaata ttcagaaatt atcggacatt caagatttta aggtggatgg
    26941 ctttgaatat tgtgcttccg aatcaacggc aaaccaactt accttcatac gatcaatcaa
    27001 aatgtgaaat aatgaacaag ataacgtttt ctgatgtcga gcgtatctag aaaaatcttg
    27061 atttctatgg tataatgggt aagttataag taaaaaggaa ggttgtttat gaaaaagaga
    27121 agcggacgga gaaaatcgtc taagctcaag ttgataaatt ttgcgctttg gggactttac
    27181 gccattactc tatgtctatt cttagtgacc atgtatcgct ataatatctt agattttcga
    27241 tatttaaatt atattgtgac aattctatta ataggtgttg cggtgctgac aggattgctg
    27301 atgtggcgta agaaagcgcg tgtctttaca gcactcttac ttgttttttc actctttatt
    27361 acttcagttg gagtgtatgg aatgcaagaa gttgttaagt tttcgacacg actaaattca
    27421 aattcgacat tttcagaata tgaaatgagc atcctcgtcc cagcaaatag tgatattaca
    27481 gatgttcgtc agcttactag tattttatct cctgccgaat acgaccaaga taacatcacc
    27541 gctttattgg aaaatatttc caaaatggag tctactcaac tagtgactag ccccgcgacc
    27601 tcatacctga cagcctacca atctatgata aatggtgaga gtcaagcgat ggtcttcaac
    27661 ggagttttta ccaatatttt agaaaatgaa gatccagact tttcttcaaa agtgaaaaaa
    27721 atatatagtt tcaaagtgac tcagactgtt gaaacagcta ctgagcaggt gagtggagat
    27781 agctttaata tctatattag tggtattgat gcttatggac cgatttctac ggtctctcgt
    27841 tcagatgtca atatcattat gactgtcaat cgtgcgacac ataagatttt attgacaact
    27901 actccacgag attcatatgt tgctatcgca gatggcgggc aaaatcaata cgataaacta
    27961 acacatgctg ggatttatgg tgtcaatgcc tctgtgcata ccttagaaaa tctttatggt
    28021 attgatatta gtaactatat ccgactcaac tttacttcct tcttacagtt gattgatttg
    28081 gttggtggta ttgatgttga aaatacccaa gaatttacaa gtcgtgttgg tggctactat
    28141 tttcctgttg gtcaggttca cttaaatgca gagcaagcgc taggttttgt tcgggaacgt
    28201 tattcacttg agggagggga taatgatcgc ggtcaaaacc aagaaaaagt cattgcagcc
    28261 ctcataaaaa aattgagttc accagataat ctagtgaact atcaagctat tctaactggt
    28321 ttggaaggat ctatccaaac agatttgagc ttagaaacga ttatgggctt ggtaaatact
    28381 caattagaat caggaacaca atttacagta gagtcacaag cattgacagg aacaggacgc
    28441 tcagatttat cttcttatgc gatgcctggg tcacaacttt atatgatgga aattaaccaa
    28501 gatagtctgg agcaagcaaa ggcagcgatt cagtctgtac ttgttgaaaa ataaagattt
    28561 taggagaaaa tatgaacaat caagaagtaa atgcaatcga aatcgatgtt ttattcttac
    28621 taaaaacaat ttggagaaag aaatttttaa ttctcttaac tgcagtgttg actgcggggt
    28681 tggcatttgt ctacagtagc tttttagtga cacctcaata tgactccact acccgtatct
    28741 atgtagtgag tcaaaacgtt gaagcaggtg cgggcttgac taatcaagag ttacaagcgg
    28801 gtacctattt ggtaaaagac tataaggaaa ttatcctatc acaagatgta ttgacacaag
    28861 tagcaacgga attgaatttg aaagagagtc tgaaagaaaa aatatcagtt tctattcctg
    28921 ttgatactcg tatcgtttct atttccgtgc gtgatgcgga tccaaatgaa gcggcacgta
    28981 ttgcaaatag ccttcgcacc tttgcagcgc aaaagattgt tgaggtcact aaggtaagtg
    29041 atgtgacgac acttgaagaa gcagtcccag cggaagaacc aaccactcca aatacaaaac
    29101 gaaatatctt gcttggttta ttagctggag gtatcttggc tacgggaatt atcttggcta
    29161 tggaagtttt ggatgaccgt gtcaaacgcc ctcaggatat tgaagaggta atgggcttga
    29221 ccttgcttgg tgtagtgcca gattcgaaga aattaaaata ggagaacaat atggcaacgt
    29281 tagaaattgc acgtacaaaa agagagatag taaataaaac cgaggagtat ttcaatgcta
    29341 tccgtaccaa tattcagctt agcggagcag atattaaggt tgttggcatt acctctgttc
    29401 agtcaaatga aggtaagagt acaactgcgg ctagtctcgc tattgcctat gctcgttcag
    29461 gttataagac cgtcttggtg gatgcagata tccgaaattc agtcatgtct ggttttttca
    29521 aacctgttac aaagattaca ggtttgacgg actacctagc agggacaaca gacttgtcac
    29581 aaggattatg cgatacagat attccaaact tgaccgtcat tgagtcagga aaggtttctc
    29641 ccaaccctac tgccctctta caaagtaaga atttcgagaa tttaatagct acacttcgtc
    29701 gctactatga ttatgtcatt gttgactgtc cgccgttagg attggtgatt gatgcagcta
    29761 tcattgcgca gaaatgtgat gcgatggttg tagtagtaga agctgggaat gtaagacgct
    29821 cagctgttaa gaaagtaaaa gaacaattgg aacaaacagg aacgccgttc ttgggagtta
    29881 tattgaacaa gtatgatgtg gtcactgaaa aatatggtga atatggaaat tacggaaatt
    29941 acggcagaaa atgatttcct cttgatggta taagtttgat aagtaggtat taatatgatt
    30001 gatattcatt cgcatatcat atttggtgtg gatgacggcc ccaaaactat tgaagagagc
    30061 ctaagtttga taggcgaagc ttatcgtcaa ggtgttcgct atatcgtagc gacatctcat
    30121 agacgcaaag ggatgtttga aacaccagaa aaagtcatca tgactaactt tcttcaactt
    30181 aaagaagcag tagcagaagt ttatcctgaa atacgattgt gctatggtgc tgaattgtat
    30241 tatagtaaag atatcttaag caaacttgaa aaaaagaaag taccaacact taatggctcg
    30301 cgctatattc tcttggaatt cagtatgaat actccttgga aagagattca agaagcagtg
    30361 aatgaagtga cgctacttgg actaactccc gtacttgctc atatagaacg atatgacgcc
    30421 ctagcgtttc atgcagagag agtagaagag ttaattgaca agggatgcta tactcaggta
    30481 aatagtaacc atgtgctgaa gcccgcttta attggtgatc gagcaaaaga atttaaaaaa
    30541 cgcactcggt attttttaga gcaggattta gtacattgtg ttgctagtga tatgcataat
    30601 ttatctagta gacctccgtt tatgagggag gcttataagt taataacaga ggaatttggc
    30661 aaagataaag cgaaagcgtt gctgaaaaag aatcctctta tgctattaaa aaaccaggcg
    30721 atttaaactg gttactctag attgtggaga gaaaaatgga ttttggaact gttaccgata
    30781 aacttttaga gcgcaacagt aaacgattga tactcatgtg catggatacg agtcttatta
    30841 tagtttccat gattttgagc aggctgtttt tggatgttat tattgacatt ccatatgaac
    30901 gctttattct tgcagtttta tttgttttaa tattctacct gattatctca gttagactaa
    30961 aggttttttc gctaattacg aggtatactg gatatcaaag ttatgtgaaa ataggactaa
    31021 gtttgatatc cgcttattca ttatttttaa tcatttcaat gattctatgg cagaccttta
    31081 gttatcgttt catcttagta tccttatttt tgtcgtatgt aatgctcatt actccaagga
    31141 ttgtttggaa agtcttacat gagacgagaa aaaatgccat tcgaaagaag gatagcccac
    31201 taagaatatt agtagtaggt gctggagatg gtgggaatat ttttatcaat accgtcgaag
    31261 atagaaaatt gaattttgaa attgtcggta tcgttgatcg tgatccaaat aaacttggaa
    31321 catttatccg taccgctaaa gttttaggaa accgtaatga tattccacga ttggtagagg
    31381 aattagctgt tgaccaagtg acgattgcca tcccttcttt aaatggtaag gagcgagaga
    31441 agattgttga aatctgtaac actacaggag tgaccgtcaa taatatgccg agcattgaag
    31501 acattatggc ggggaatatg tctgtcagtg cctttcagga aattgacgta gcagaccttc
    31561 ttggtcgacc agaggttgtt ttggatcagg atgaattgaa tcagtttttc aaagggaaaa
    31621 caatccttgt cacaggggca ggtggctcta tcggttcaga gttatgtcgt caaattgcta
    31681 agtttacgcc taaacgcttg ttgttgcttg gtcatggaga aaattcaatc tatctcattc
    31741 atcgagagtt actggaaaag taccaaggta agattgagtt ggtccctctc attgcagata
    31801 ttcaagatag agaattgatt tttagcataa tggctgaata tcaacccgat gttgtttatc
    31861 atgctgcagc acataagcat gttcctttga tggaatataa tccacatgaa gcagtgaaga
    31921 ataatatttt tggaacgaag aatgtggctg aggcggctaa aactgcaaag gttgccaaat
    31981 ttgttatggt ttcaacagat aaagctgtta atccgccaaa tgtcatggga gcgactaaac
    32041 gtgttgcaga aatgattgtt acaggtttaa acgagccagg tcagagtcaa tttgcggcag
    32101 tccgttttgg gaatgttcta ggtagtcgtg gaagtgttgt tccgctattc aaagagcaaa
    32161 ttagaaaagg tggacctgtt acggttaccg actttaggat gactcgttat ttcatgacga
    32221 ttcctgaggc aagtcgtttg gttatccaag ctggacattt ggcaaaaggt ggagaaatct
    32281 ttgtcttgga tatgggcgag ccagtacaaa tcctggaatt ggcaagaaaa gttatcttgt
    32341 taagcggaca tacagaggaa gaaatcggga ttgtagaatc tggaatcaga ccaggcgaga
    32401 aactctacga ggaattgtta tcaacagaag aacgtgtcag cgaacagatt catgaaaaaa
    32461 tatttgtggg tcgcgttaca aataagcagt cggacattgt caattcattt atcaatggat
    32521 tactccaaaa agatagaaat gaattaaaag atatcttgat tgaatttgca aaacaagaat
    32581 aagaaagtaa aaaatatttt tactttccta gagtttaaac gatgtttaag ttctaggaag
    32641 gttggaatac ttt
//
LOCUS       DBNFCX010000018        31872 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.018, whole genome shotgun sequence.
ACCESSION   DBNFCX010000018 DBNFCX010000000
VERSION     DBNFCX010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 31872)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31872)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31872
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.018"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..2172
                     /locus_tag="AC1PJC_000695"
     CDS             <1..2172
                     /locus_tag="AC1PJC_000695"
                     /inference="COORDINATES: protein motif:HMM:TIGR04226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018262 - isopeptide cross-linking
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isopeptide-forming domain-containing fimbrial
                     protein"
                     /protein_id="HIP6619716.1"
                     /translation="KESDTLANRYDVFTYHISTSVPNDATAFTITDTLVPVLEFSGDI
                     AVEIDGKLISANTTIDNQTLTVDLTEEQVRNNGGKPVVVTFNAKIRSGANLSAYIVDG
                     KTAVPNTAEYVINNNPETKKKSNEVPVYPPTPEGGEPEIDKKINKTLDYLEIARGKSY
                     NYDITTTIPEDIVDYKEFVITDQVDSALQINGDVVVDIDGYSAEGIVDVVVDGQAVTV
                     AVKDFSKLEGRSAIHIFIPATIRPEADLSTYVDNSVPNTANLHFTDGPGVTKDKSTVP
                     VIVTPPTPPTPVPPTPGDPTKTVNTADGNEQAFHLDLLQRTSDFRYDIAYTIEADSQY
                     TAFTMEDTLESVLNIQRVAIKVGSGENLVLKEFAELEAKLAEAKGTLETLEAKKTEIT
                     NTVSSVATMATELEAQKVRIAEIEQELAIKEAELATASAASTVAPSTTEETDGTSVVD
                     ESTDNSQPVVDKQAEIQALTVAIEQLKASKDQVQQTVVELEQQIEVANTSEASLAALE
                     VEIRNATASIEELEKQLAEKTPKATIAREVEAALLAVNEKGELTDASAAILGQVSIDK
                     ATNHVVFDITNPDVLASLRGRQVTMSIYATINPEADLSNYVTDKGIELVPNTASVTFD
                     RNPQTKKKTNTVTVTPPPLPEPPGPPTPLPPLPPVEPPVPSDPPTQPTPPTPPTTPPA
                     ETTPPTPGKTLPKTGVAENGMYALVGMILGTLTLVFRRRKQ"
     gene            2319..2891
                     /locus_tag="AC1PJC_000696"
     CDS             2319..2891
                     /locus_tag="AC1PJC_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HIP6619717.1"
                     /translation="MRKRDIFTTGVIATLVVGGAVYLGTTANLTQSAPTTEVSQSSSQ
                     PSDGELLSLTEKISKITFLDKSNKETSLADFAGKPSIVVFWASWCPDCQAQLPILAKL
                     YEKYGKDVNFIFLNVVDGTRETAENGQKYLADNYKFTYYQDKDMVAADSMEVTNIPTM
                     FILNKDQDVVSVFRSNQTEQTLADVLDTVK"
     gene            3141..4151
                     /gene="gap"
                     /locus_tag="AC1PJC_000697"
     CDS             3141..4151
                     /gene="gap"
                     /locus_tag="AC1PJC_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008090210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HIP6619718.1"
                     /translation="MVVKVGINGFGRIGRLAFRRIQNVEGVEVTRINDLTDPVMLAHL
                     LKYDTTQGRFDGTVEVKDGGFEVNGKFVKVSAEREPGNIDWATDGVDIVLEATGFFAS
                     KEKAEQHIHANGAKKVVITAPGGNDVKTVVFNTNHDILDGTETVISGASCTTNCLAPM
                     AKALHDAFGVQKGLMTTIHGYTGDQMVLDGPHRGGDLRRARAAAANIVPNSTGAAKAI
                     GLVIPELNGKLDGAAQRVPVPTGSVTELVATLDKKVTAEEVNAAMKAAATESFGYTED
                     QIVSSDIVGISFGSLFDATQTKVIEVDGEQLVKVVSWYDNEMSYTAQLVRTLEYFAKI
                     AK"
     gene            4305..5426
                     /locus_tag="AC1PJC_000698"
     CDS             4305..5426
                     /locus_tag="AC1PJC_000698"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619719.1"
                     /translation="MKKFLNLHPKFIRFVFLLVAVLACLSFAYSRYENYRLTPRISEE
                     VKNAPLKIDTSSVELEDGKSYRLPRNIANLVGVYKGLENGHEVQVRVNPDGTYEIISK
                     GERLTETYLDKNGELRYKQEETVGLEIGILVEEHGYVRFYRYKDTIDDDALMGLEILS
                     NGLYIDSDGKVDLLKSMFQKLRREAVFRHNEYVPQDVLTIDETNAVFTPNFLLFDKEK
                     LVSYSYYSAHSFKDGPFKTSYTPKSEFTKSKDVYDIWAQPIEKWTIEEVLIEEVTLSD
                     FLQMYGSSIRKTAKGLWQIANQTIKEPTDTELEIYIKENGRALTDEELVHIKKKYGVE
                     FDVSFGIENKGYFTTINVFGWSEDTGFDEFGLLKENGRF"
     gene            5434..6027
                     /locus_tag="AC1PJC_000699"
     CDS             5434..6027
                     /locus_tag="AC1PJC_000699"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619720.1"
                     /translation="MLSIASDIVTIIGGLTIVGSLYQYLKAKSFEKEVSFLEIIDSFN
                     SSIEVIEEKLELIEGWNDYILYEEGPEVFDKQLNQLRMQESRSQKNMLYLDLLKTLFT
                     YSGSMPLQDIFESDPYIVGELVELLVQKSEALLSDYKTEQIVRFRKYCLQLSDDYLSI
                     HKGGMEEEDVMRYKELHLDILNDVKSSLEKYVKEKAL"
     gene            6024..6374
                     /locus_tag="AC1PJC_000700"
     CDS             6024..6374
                     /locus_tag="AC1PJC_000700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619721.1"
                     /translation="MKKYLSAIVLVLGTLFLVACSKAEEVVVETINNVDGRYIANAYG
                     FEFELEIDGETITGEASVGIVDSDIAGSVDLQGQEIDIDLSDSKSISGTYEKLENGDL
                     EVDFSGKMIVFEKQ"
     gene            6361..7107
                     /locus_tag="AC1PJC_000701"
     CDS             6361..7107
                     /locus_tag="AC1PJC_000701"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619722.1"
                     /translation="MKSSSRKIGVSMRKNIHAVIMGLLIVALLWFVYQIFDIQKKTEQ
                     YKDAVAAFVGTVESKNYGEALSQLSRLESYSLSNSKLIEAKEVTRILKGDLTSLENRQ
                     KALKLEPVEFLTGYFNAQFTPGTTYLVSHDRDMMLEYETKAPEIVRNYIIGNTFYEYD
                     GHGGIDYDKFIKISEDGNVNYLSRTGKIGRIRVYLNKVEVFLQNVNGDEIYEWGIWDI
                     ESSVIDSTLYTSRNGRAIDRVYEASGYTKE"
     gene            7122..7256
                     /locus_tag="AC1PJC_000702"
     CDS             7122..7256
                     /locus_tag="AC1PJC_000702"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619723.1"
                     /translation="MKIKLVYTLLILALGAAIMTYFVTQDKYFDLIDSKYILQQLGVE
                     "
     gene            7541..8740
                     /locus_tag="AC1PJC_000703"
     CDS             7541..8740
                     /locus_tag="AC1PJC_000703"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HIP6619724.1"
                     /translation="MAKLTVKDVELKGKKVLVRVDFNVPLKDGVITNDNRITAALPTI
                     KYILEQGGRAILFSHLGRVKEEADKEGKSLAPVAADLAAKLGQDVAFIAGATRGAELE
                     AAINALEDGQVLLVENTRFEDVDGKKESKNDEELGKYWASLGDGIFVNDAFGTAHRAH
                     ASNVGISANVEKAVAGFLLENEIAYIQEAVETPERPFVAILGGSKVSDKIGVIENLLE
                     KADKVLIGGGMTYTFYKAQGIEIGNSLVEEDKLDVAKALLEKANGKLILPVDSKEANA
                     FAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDFQA
                     GTIGVMDAIVKQPGVKSIIGGGDSAAAAINLGRADKFSWISTGGGASMELLEGKVLPG
                     LAALTEK"
     gene            9426..9941
                     /locus_tag="AC1PJC_000704"
     CDS             9426..9941
                     /locus_tag="AC1PJC_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HIP6619725.1"
                     /translation="MFKKYTFDPKKFRLGMRTFKSGLAVFLVILLFGYMGWEGIQIAA
                     LTAVFSLREDFDQSVHFGASRILGNSIGGFYALLFFILDRLFLDHFWVTAVFVPIFVM
                     LTIMTNVAMNNKAGIIGGVSALLIITLSIPAGDTIQYVFIRVFETFIGVFIAILVNYD
                     VNVIKKRFQDK"
     gene            10017..10388
                     /locus_tag="AC1PJC_000705"
     CDS             10017..10388
                     /locus_tag="AC1PJC_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HIP6619726.1"
                     /translation="MREKEFRRSLAIFPIGSVMKLTDLTARQIRYYEDQGLIKPDRNE
                     GNRRLYSLNDMDLLLEIKDFLDEGLNIAAIKKEYANREAKAKVQKQQKTLTDEDVRRI
                     LHDEFSRQGRFSSPSSIFRSS"
     gene            10417..11763
                     /gene="glnA"
                     /locus_tag="AC1PJC_000706"
     CDS             10417..11763
                     /gene="glnA"
                     /locus_tag="AC1PJC_000706"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008808235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HIP6619727.1"
                     /translation="MTFTVADIKRDIKEKNVTFLRLMFTDIMGVMKNVEIPATDEQVE
                     KVLSNKVMFDGSSIEGFVRINESDMYLYPDLDTWTIFPWGDENGRVAGLICDIYTTDA
                     KPFAGDPRGNLKKSLRHMEEAGFSSFNLGPEPEFFLFKMDEQGNPTLEVNDKGGYFDL
                     APTDLADNTRREIVNVLTEMGFEVEASHHEVAVGQHEIDFKYADVLKACDNIQIFKLV
                     VKTIARKHGMYATFMAKPKFGIAGSGMHCNMSLFDKDGNNAFFDPEDPRGMQLSQTAY
                     HFLGGLIKHAYNYTAITNPTVNSYKRLVPGFEAPVYIAWAGKNRSPLVRVPASRGMGT
                     RLELRSVDPTANPYLAMAVLLEVGLEGIQNKIEAPAPVESNIYAMSDEERREAGITDL
                     PSTLHNALKALREDEVVRAALGDHIYTNFLEAKKIEWASYATYVSQWEIDNYLDMY"
     gene            complement(12085..13764)
                     /gene="rnjA"
                     /locus_tag="AC1PJC_000707"
     CDS             complement(12085..13764)
                     /gene="rnjA"
                     /locus_tag="AC1PJC_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J1"
                     /protein_id="HIP6619728.1"
                     /translation="MSSVNLKPHEVGVFAIGGLGEIGKNTYGIEYKDEILIVDAGIKF
                     PEDDLLGIDYVIPDYSYIVENLDRVKGLVITHGHEDHIGGIPFLLKQANVPIYAGPLA
                     LALIRGKLEEHGLLRDATLHEINHNTELTFKHLKVSFFRTTHSIPEPLGIVVDTPQGK
                     IVCTGDFKFDFTPVGEPADLHRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIM
                     KLIEGIHGRIIFASFASNIFRLQQAADAAVKTGRKIAVFGRSMEKAIVNGIELGYIKV
                     PKDTFIEPNEIKEYPASEIMILCTGSQGEPMAALSRIAHGTHRQVQLQPGDTVIFSSS
                     PIPGNTTGVNNLINILIEAGVDVIHGKINNIHTSGHGGQQEQKLMLRLIKPKYFMPVH
                     GEYRMQKIHASLAVDTGVPKDNIFIMENGDVLALTKDSARLAGQFNAQDIYVDGNRIG
                     EIGAAVLKDRRDLSEDGVVLAVATVDFNSKMILAGPDILSRGFIYMRESGELIRESQR
                     VLFNAIRIAMRNKDANIQTVNGAIVNALRPFLYEKTEREPIIIPMILTPDR"
     gene            complement(13768..13998)
                     /locus_tag="AC1PJC_000708"
     CDS             complement(13768..13998)
                     /locus_tag="AC1PJC_000708"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000639444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed RNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-dependent RNA polymerase subunit epsilon"
                     /protein_id="HIP6619729.1"
                     /translation="MIYKVFYQESKISPRREQTRALYLDIDAASELEGRIIARELVET
                     NRPEYNIEFIDLLSDNHLEYEKEHADFKITEF"
     gene            14653..15336
                     /gene="tsaB"
                     /locus_tag="AC1PJC_000709"
     CDS             14653..15336
                     /gene="tsaB"
                     /locus_tag="AC1PJC_000709"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HIP6619730.1"
                     /translation="MKILALDSSNQALSVALVEDGRLQAETLLAVKKNHSISLMPVVD
                     FLVAQVGWTPKDLDRIVVAQGPGSYTGLRVAVATAKTLAYTLKIDLVGLSSLQSLVPP
                     SLTGLVVPLIDARRNCVYAGVYENGRAVEPDRYWSFEDLLSSLAGKENITFVGEVANF
                     IEQIEQALPTAQYQASLPSAYQLAVIGQDLPAVDVASFEPNYLKRVEAEENWLKDNQA
                     GSESYIKRV"
     gene            15333..15773
                     /gene="rimI"
                     /locus_tag="AC1PJC_000710"
     CDS             15333..15773
                     /gene="rimI"
                     /locus_tag="AC1PJC_000710"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 - protein-N-terminal-alanine
                     acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HIP6619731.1"
                     /translation="MIEIKHYDGQENLAEAVLAVMQSVYETSPWTLEQIVTSLASQDE
                     DYYLAYEGQELVGFLAVQTVLDEMEILQIAVKADFQRLGIASQLMAAVMGWDGDIFLE
                     VRESNSAAQALYARQHFTKIGKRKDYYRNPVEDAVLMKRERNER"
     gene            15763..16770
                     /gene="tsaD"
                     /locus_tag="AC1PJC_000711"
     CDS             15763..16770
                     /gene="tsaD"
                     /locus_tag="AC1PJC_000711"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HIP6619732.1"
                     /translation="MKDRLILAIETSCDETSVAVLRNEAELLSNVIASQIASHQRFGG
                     VVPEVASRHHVEVITACIEEALLEAEVTAEDLTAVAVTYGPGLVGALLVGISAAKAFA
                     WANGLPLIPVNHMAGHLMAARAVKELEFPLLALLVSGGHTELVYVSEAGDYKIVGETR
                     DDAVGEAYDKVGRVMGLPYPAGRVIDELAHEGQDIYDFPRAMIKEDNLEFSFSGLKSA
                     FINLYHNAQQKGETLSNADLSASFQACVMDILMAKTKKALEQYPVKTLVVAGGVAANQ
                     GLRERLAAEITDVEVIIPPLRLCGDNAGMIALAAVSEYNKENLAGWDLNAKPSLAFEN
                     L"
     gene            complement(16807..17643)
                     /locus_tag="AC1PJC_000712"
     CDS             complement(16807..17643)
                     /locus_tag="AC1PJC_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HIP6619733.1"
                     /translation="MKIQPEFYVFNNRSYVDFYPIQFGMEACKPLHSFGPTMKQHYLF
                     HYIISGSGTFYDTSDQREYHLTAGQGFLISPDAICSYEADAKDPWTYIWLEFDGLKTE
                     HFLRQAGLSKEQPIFSQREMPTSSPVYHEMKQILALHHQKSACLLGHLYLFISYLIDC
                     SLTKTSSKHDENKEFYIREAINFVERNYEKAISVDDLAQVCNLNRHYFSRLFKEQMNI
                     SPQQFIIQYRLSEACELLKNTTKTLQEIAEEIGYSNQFNFSTAFKRHYQISPNRWRKI
                     HK"
     gene            17858..19132
                     /locus_tag="AC1PJC_000713"
     CDS             17858..19132
                     /locus_tag="AC1PJC_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIP6619734.1"
                     /translation="MKKFGRYVTLLAAAGLLAACSTSTESSKATEGSSSGKTEISYAI
                     WDSGQEPGLRKIADEFEKKNPDIKINIQVSDWDSYWTMLEAGATGGSLPDTFWMHSNE
                     IYRYGSNEMLLPLDEYLAKSEDAKLANFPDGLNEIYNINGKQYAIPKDFDTIGLWYNK
                     KLFDEAGIPYPDDTWDWNKLKEVAKQLTKPDGSQYGFGAGLSNQEGYYNFIYQNGGKV
                     ITDDLKSGYDDPKTIEALDYYFSFVKEKISPAITVDKERAEAFQNGQVAMSVFGSWNL
                     SGFTANDYIRENADVAVLPKGPDGTRATIFNGLGHAIAATTKQPDAAWKWVEYLSSKE
                     AQEMQATLGVAISAYKGAADTWVDSNKNFAIKNYVDMVDYAQIRPYSQTTIKWEDKAY
                     ELLKPAYLGEKATEEAAKETADMMNAELATEK"
     gene            19200..20093
                     /locus_tag="AC1PJC_000714"
     CDS             19200..20093
                     /locus_tag="AC1PJC_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HIP6619735.1"
                     /translation="MFRKKGSLNEAIWGWAMVAPTIIGLVVLNIIPIFQTMKMSFHKS
                     GDFGKGDIFVGLANYQRMLGDAQVWQATWNTLKYTVLVVPATVALAMLLAVLLNSKIK
                     GKHIYRTIFFLPMVAAPAAVTMVWKWLYNTDFGLINYVLRRLGLGAVNWIEDPKIALY
                     SIALIGIWSTVGYSMILILAGLQEIPTDFYEAARIDGASPAKQFFSITLPLVSPTLFF
                     VVVTSVIQSMQVFDVIYMMEDIRSPAYDKTVSLVYLFYNNSFKYSDKGYGSTIVMLLL
                     LIILVITFVQMKVQKKWVHYR"
     gene            20104..20934
                     /locus_tag="AC1PJC_000715"
     CDS             20104..20934
                     /locus_tag="AC1PJC_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HIP6619736.1"
                     /translation="MKQSAFKSTIWMHAFLILVAMGMLIPFVWMVLTSFKTVTESTQM
                     NPFQFLPSKWMVSNYTEAIRTNNFPILYLNTILMMLWRIFSSVMFSAMAAYAFARLEF
                     PGRNVLFGLVLFQMMVPPQLFVIPQYLMIDQLGMRNTIFALVFPGIVSAFGTFLLRQF
                     FMGLPKELEESAKLDGCNIGQTFFKVMLPLAKSGLIALAIFTALFAFKDLLWPLIINS
                     EADKATLSSALSKIQGAYAVNYPQLMAASVLAIWPMLVLYVIFQKQFIQGIATSGGKL
                     "
     gene            20944..23145
                     /locus_tag="AC1PJC_000716"
     CDS             20944..23145
                     /locus_tag="AC1PJC_000716"
                     /EC_number="3.2.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004557 - alpha-galactosidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0000272 - polysaccharide catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-galactosidase"
                     /protein_id="HIP6619737.1"
                     /translation="MGIIFHEKTKEFHLYNEFISYVLTVLPNGHIGSLYYGKRVTETA
                     SYQYVREDEYRALTSFVEDDDRFFSLQYANPEFACYGTTDYFSPTFELVQKDGSSLSH
                     FVYQGHVIYAGRSALKGLPHLYLDEEGQADSLDIYLLDEQSQTRLVLSYTIFRDYPAV
                     TRSARFEQLGEKSVCLNRALSMTLCLPDMDYEWLHLDGAWGRERHLQVSPLHQGCQSI
                     YSLKGASSAEHNPFMALKRPTADEQQGEVLGFSLVYSGNFLAQVDVSSFQKTRVSMGI
                     HPERFSWTLDKGEEFQTPEVVMVYSEHGLNGMSQTYHRLFQKHLVRGYWRDRERPVLL
                     NNWEAMSFDFDEETILSLAKEAAGLGVELFVMDDGWFGKRNHDRAGLGDWTVNREKLP
                     SGLTGIIDQVHAMGMKFGLWIEPEMVNKDSDLYRAHPDWIFHHPQHSQSHGRHQYTLD
                     LSREDVYQNIHDQLHRLLTEHDIDYIKWDMNRYMTEVFTCTREAERQGETFHRYILNL
                     YRLYDSLIAAFPTVLFESCSSGGARFDPGMLYYAPQTWVSDDTDAMERLKIQYGTSMV
                     YPLNSMGCHVSASPNQQLGRATPLNTRANVAFFGSFGYELDLFDCSQEELEEMKEQIA
                     FYKAHRKIFQQGIFTRLKSPFDGEITAWQVQSSDGQQVIVGYYRRLTTANLAYQRLYL
                     QGLEEEAVYHLDGEVYTGSQLMHTGLSIRHGDHVGDNKDFTSCLMVLQKQQ"
     gene            23320..24021
                     /locus_tag="AC1PJC_000717"
     CDS             23320..24021
                     /locus_tag="AC1PJC_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HIP6619738.1"
                     /translation="MKEHSFREGLRDAIPTALGYASIGLACGVVSVNSGISAVEMALM
                     SLLVYAGSAQFVMCAMILAGASLLSIAVTVFFVNLRNFLMCLHTTTIFQGNSLGSNIL
                     IGSFVTDESYAVLLRKHIEEKQIAPSWMYGNNFASYASWVIFTTLGNLIGGLIPNPEQ
                     FGLDFALVAMFVGIFSGQLEAMARTIPLKKIGLILLAVGLAYVGLSVLVSSYVAVLLA
                     TLLGCFVGVMIDDKN"
     gene            24008..24331
                     /locus_tag="AC1PJC_000718"
     CDS             24008..24331
                     /locus_tag="AC1PJC_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD domain-containing protein"
                     /protein_id="HIP6619739.1"
                     /translation="MIKTSILLIILVSALVTWLPRVLPFVLTQNKSLPPRMVKFLSFL
                     PITIIFALTLSSIMDEKVGSLPSLLPVESLALIPTFLVVLRTKNILLAVVVGVLTTAA
                     LRLLF"
     gene            24341..25363
                     /locus_tag="AC1PJC_000719"
     CDS             24341..25363
                     /locus_tag="AC1PJC_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HIP6619740.1"
                     /translation="MVKKNARGVALCLVLAGISWCLGSWFSVVGGPVFALLIGMSLHS
                     YISRKHAFQSGLTFTSKKILQYAVICLGFGLNLFAVLAVGRQSLPIILSTISFALFLA
                     FLMWKILPISSHLATLIGVGTSICGGSAIAATAPIVQADDEDVAQAISVIFLFNVLAA
                     LIFPTLATWLGFSTDSGQAFGMFAGTAVNDTSSVTATAATWDSLYGLGSQTLDTAVTV
                     KLTRTLAIIPITSVLAIWQARGKGVQADKKSLLASFPTFILYFILASLVTTIAGHLGL
                     GTDLFSPLKTLSKFLICMAMAAIGLRTNVFSLVKNGRAALLIGLICWLGVTVLTLVWQ
                     AILGIW"
     gene            complement(25503..27128)
                     /locus_tag="AC1PJC_000720"
     CDS             complement(25503..27128)
                     /locus_tag="AC1PJC_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619741.1"
                     /translation="MKTILRYFWYQEKYNLYRTVNGFFYYLRKLPLVGKCIPESIFKS
                     YSFKSGLFLILHVLSIPSRFLVKGIWLTIYSCIATFWIKLLSNNQLDFWQIPSDTWLL
                     GFSMWMVFVGYTYRFGKGFEPFIAKSEREFMRNFGLSQSSFLQSQLFVEPIITSLAYL
                     PALLIFSSLSGNWLYLPLGLLTIPAGSFTGQALNRALFNRGILTRRNSWQSWIILSTG
                     LAAIACLILFRNHLSPIFLLPMLACQVLLIWFGYGYLKQQTNHLDYLYYCMDQSLQMD
                     KKIFEMTKGNEYTRQGLQMQAKLSMETGKDLTHLSGMTYLNALLFDRYRSVLTKKLHF
                     RLGCLLAIVLFIEGIRWFSKDDIQISNTNYIEGLPFAFMVMYAASMGKAVAQMVFVNC
                     DISMLHYPFYREAKTIIAGFHYRFLQTVKLNAAFSGSLLLALIIFTRAQLPIETYLLT
                     ALLLLSLTTLFSFHDLFIYYILQPFTKDMEVVNPVYKFLSGALYWVAYLNIKLDLGSH
                     LYILLISIAMITYVSIGYWILLKKAPQTFRLKS"
     gene            complement(27138..27836)
                     /locus_tag="AC1PJC_000721"
     CDS             complement(27138..27836)
                     /locus_tag="AC1PJC_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIP6619742.1"
                     /translation="MQLKLSSISKKFDHKIILEDASFQFEQGKIYGLLGRNGAGKTTL
                     FNCIARNLTLDNGSIQFVKDENAFDYDNTDIGFTQTYPQLPAFMTAYEFVRFYMDIHK
                     DKLKSPRSPEEWLNLVGIGEEDQHRLLKDFSHGMQNKVQLLLSLIVQPPVLLLDEPLT
                     SFDPVAAHEFKQLIREAKKDSVIIFSTHILQLAQDLCDEIVLLHHQKLQAVPSEKLHD
                     PDFEQEVVALLTAD"
     gene            complement(28196..29371)
                     /locus_tag="AC1PJC_000722"
     CDS             complement(28196..29371)
                     /locus_tag="AC1PJC_000722"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HIP6619743.1"
                     /translation="MNTVDTIIIGAGPAGMMAAISSSFYGKKTLLLEKNKRLGKKLSG
                     TGGGRCNVTNNGTLEDLLAGIPGNGRFLYSVFSQFDNHDIMNFFQENGVKLKVEDHGR
                     VFPTTDRSQTIIKCLEMKMLENGVDIRTGTEVVSVRKMDDLFHVKTSEETFTAPQLIV
                     TTGGKTYPSTGSTGFGHDIARHFKLEVTEIEAAESPVLTDFPHKKLQGISLDDVTLTY
                     GKHVITHDLLFTHFGMSGPAALRLSSFVKGGETAFLDALPTHSDQDLFEHLEKNREKS
                     VKNALAELMPDRLADFFAENYDCKVKQVQKKDLTELVTLLKALPIKITGKMSLAKSFV
                     TKGGVDLKEINPKTLESKKIPGLHFAGEVLDINAHTGGFNITYCLATGWVAGSSYSS"
     gene            29609..31009
                     /locus_tag="AC1PJC_000723"
     CDS             29609..31009
                     /locus_tag="AC1PJC_000723"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HIP6619744.1"
                     /translation="MVTEQREYRFPEGFLWGSSTSGPQSEGSVAGDGKGWNNWDYWYS
                     QEPKLFHQQIGPEQTSTFYEHFQSDLDLLVETGHSIFRTSIQWSRLIPEGIGEVNPQA
                     VEFYRAVFAGIRERGIKLLVNLYHFDLPYVLQEKGGWENKEIVWAYEAYARQCFSLFG
                     DLVDHWITFNEPIVPVECGYLGSYHYPCKVDAKAAVVVAYHTQLASSLAVRACHQLHP
                     DHKISIVLNLTPAYPRSQSPEDLQAARIAELFQTRSFLDPSVLGQYPRELVDILEKHG
                     LRPETTEEELTIIKENRVDFLGVNYYQPLRVQAPSEDGWNGEATFLSQYFQPYDKPDK
                     KINPHRGWEIYEEGLYDIAKNIQENYGNIEWLVTENGMGVEGEDVFEENGMIQDDYRI
                     NFMEDHLIQLHRGIDEGANCKGYMVWTFIDCWSWLNAYKNRYGLVSLDLQTQKRTVKK
                     SGYWFKQVSAKNGFIR"
     gene            31179..31673
                     /locus_tag="AC1PJC_000724"
     CDS             31179..31673
                     /locus_tag="AC1PJC_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019783378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF536 domain-containing protein"
                     /protein_id="HIP6619745.1"
                     /translation="MGIEKTVSELAEILGVSRQAMNNRVKSLPEEFVDKNDKGVTVVN
                     RAGLIKLEEIYKTTIFEDEPISDEVKHRELMEILVDEKNAEIIRLYSQLKAKDKQLAE
                     KDEQLKVKDVQIAEKDKQLDQQQQLTLKAMADKEVLKLELDEVKAQAEEVQAKGFFAR
                     LFGK"
BASE COUNT         9056 a         5893 c         7704 g         9219 t
ORIGIN      
        1 aaggaaagtg atacattagc aaatcgttat gatgtcttta cttaccatat ttctacaagt
       61 gtaccgaacg atgcaacagc atttacaatc acggacactc ttgttcctgt tcttgaattt
      121 agtggtgata tcgctgttga aattgatgga aaacttattt cagctaatac aacaatagat
      181 aaccaaacat taacagtaga cttgacagaa gaacaagtac gaaataatgg cggtaaacct
      241 gtagttgtta ccttcaatgc taagattcgt tcaggagcaa atctttcagc atatattgtt
      301 gatggaaaaa ctgctgttcc gaacacagcg gaatatgtaa tcaataataa cccagagacg
      361 aagaagaaat ctaatgaagt tccagtttat cctccaactc ctgaaggggg agaaccagag
      421 attgataaga aaatcaataa aacattggat tacttagaaa ttgcacgagg taaatcttac
      481 aattacgata taacaacaac tattccagaa gatattgttg attataaaga atttgtaatt
      541 accgaccagg ttgattcagc tcttcaaatc aatggagatg tagtagttga tatcgatgga
      601 tatagtgcag aaggaattgt agatgtagtt gttgatggac aagctgtcac agtagcagta
      661 aaagatttct ctaaactaga gggacgttca gcaattcata tctttattcc agctacaatt
      721 cgtccagaag cggacttatc tacttatgtg gataattcgg ttccgaatac ggctaatctt
      781 cactttacgg atggtccagg agtaacaaaa gataagtcaa ctgttccagt tatcgttact
      841 ccaccaactc caccgacacc agtaccaccg acaccggggg atcctactaa gacggtgaat
      901 acagctgatg gtaatgaaca agcattccat ttggatctgt tgcaacgtac ctcagacttc
      961 cgatatgata ttgcgtatac aattgaagcg gatagccagt atacagcatt cacaatggaa
     1021 gatactttgg aatctgtttt aaatatccaa cgtgtggcaa ttaaagttgg atctggtgaa
     1081 aacttagtgt taaaagagtt tgctgaatta gaagcgaagt tggcagaagc caagggaact
     1141 ctagaaactc tagaagctaa gaaaacagaa attaccaata ctgtaagttc ggtcgctact
     1201 atggctactg aattagaagc tcaaaaagtg cgtatagctg aaattgagca agagttggca
     1261 ataaaagaag cagaattagc tacagcttct gcagcatcta cagtagctcc ttcaacaaca
     1321 gaggagacag atggaacatc agtagtagat gaaagtactg acaatagtca gcctgtagtt
     1381 gataagcagg cagaaattca agccttgact gttgcgatag agcagttgaa ggcaagtaaa
     1441 gaccaagttc aacaaacagt tgtggaattg gaacaacaaa tcgaagttgc aaatactagc
     1501 gaagcaagtc ttgcagcatt agaagttgaa attcgaaatg ctacagcctc aattgaagag
     1561 cttgaaaaac aacttgctga aaaaacgcct aaagcaacca tcgcccgtga agttgaagcg
     1621 gctctcttgg cagtcaatga gaagggtgaa ttaacagatg cgtcagcagc tattttagga
     1681 caagtaagta tcgataaagc tacaaaccat gtagtatttg atattacgaa cccagatgtg
     1741 ttggctagtc tacgtggtcg tcaagtgact atgtcgattt atgcgacgat taatcctgaa
     1801 gctgatttat caaactatgt tactgataag ggaattgagc tcgttcctaa cacagcttct
     1861 gtaacatttg atcgtaatcc acagactaag aagaagacaa atactgttac agtaactcct
     1921 ccaccacttc cagaaccacc gggaccacca acaccgcttc caccgcttcc accagtggaa
     1981 ccaccggtac catcggatcc accaactcaa ccaaccccac caacaccgcc tacaactcca
     2041 ccagcagaaa caaccccacc aactccagga aaaacacttc ctaagacggg tgttgctgag
     2101 aatggaatgt atgcccttgt tggaatgatt ctaggaactc ttacacttgt gtttagaaga
     2161 cggaagcagt aagataaact ctgaagaatc aataagcatg tattaggtgc ttaaacacag
     2221 atgactcggg ttcaagttaa cattaacaat gaacccgagt tatttttgtt ttttagttaa
     2281 aaattatgat atagtaatag agaagaatgg aggaaaatat gagaaaaaga gatattttta
     2341 ctaccggtgt aattgcaacc cttgtggtgg gtggtgcagt ctacttgggg acgacagcta
     2401 atctaacaca gagtgcaccg acgactgaag ttagccaaag ctctagtcag ccttcggacg
     2461 gtgaattact ttcattgacg gaaaaaatta gcaagattac atttttggat aaaagcaata
     2521 aggaaactag tctggctgat tttgcaggca agccatccat tgttgtattc tgggcaagtt
     2581 ggtgtccaga ttgtcaggca caattaccta ttttggcaaa gctatatgaa aaatacggaa
     2641 aagatgttaa ctttattttt ctaaatgttg tagatggtac acgcgaaact gcagagaatg
     2701 gtcaaaaata tttggctgac aactataagt tcacctacta tcaagataaa gatatggttg
     2761 cagcagacag tatggaagtc actaatattc caacgatgtt tattctgaat aaagaccagg
     2821 atgtggtatc tgttttccgt agcaatcaaa cagagcagac attggctgat gtattagata
     2881 ctgtgaagta gtctaaattt tgtcaatcgc tagattgaac aagagtgata tatcattatt
     2941 taccaggcag cttcggctgc ctttttctat gtaagttcct gcattaaagt atgcaaactc
     3001 ttgcaatttt cggtaaatag ttatataata aaaacgttga aaagatgctt gtaggcttac
     3061 aagttaatat tttcacaaaa ggattaaaag gcttgccttt taaaataaag aactcgattt
     3121 tcataaggag gaaatcattc atggtagtta aagttggtat taacggtttc ggacgtatcg
     3181 gtcgtcttgc tttccgtcgt atccaaaacg tagaaggtgt tgaagttact cgtatcaacg
     3241 accttacaga tccagtaatg cttgcacact tgttgaaata tgacacaact caaggtcgtt
     3301 tcgacggtac tgttgaagtt aaagacggtg gtttcgaagt taacggtaaa ttcgttaaag
     3361 tttctgctga gcgcgagcca ggaaacatcg actgggctac tgatggcgta gatatcgttt
     3421 tggaagctac aggtttcttt gcttctaaag aaaaagctga gcaacacatc cacgctaacg
     3481 gtgctaaaaa agttgttatc actgctcctg gtggtaacga tgttaagact gttgttttca
     3541 acactaacca cgacatcctt gatggtactg aaacagttat ctcaggtgct tcatgtacta
     3601 caaactgttt ggcaccaatg gctaaagctc ttcacgatgc atttggcgtt caaaaaggtt
     3661 tgatgactac aatccacggt tacactggtg accaaatggt tcttgacgga ccacaccgtg
     3721 gtggtgacct tcgtcgtgca cgtgctgctg ctgcaaacat cgttcctaac tcaactggtg
     3781 ctgctaaagc tatcggcttg gtaatcccag aattgaacgg taaacttgac ggtgctgcac
     3841 aacgtgttcc agttccaaca ggttctgtaa ctgaattggt tgcaactctt gacaagaaag
     3901 taactgctga agaagtaaac gctgctatga aagctgctgc tactgaatca tttggttaca
     3961 ctgaagacca aatcgtatct tcagatatcg taggtatctc attcggttca ttgtttgatg
     4021 caactcaaac taaagttatc gaagttgatg gcgagcaatt ggttaaagtt gtttcatggt
     4081 acgacaacga aatgtcttac actgcacaac ttgttcgtac tcttgagtac ttcgcaaaaa
     4141 tcgctaaata atccttagtg aaaattgaag aggcttcggc ctcttttttt tcacacaaag
     4201 aacacatata agtatgtttt tgtgcaaaaa agcttgttat actatgcata acaagtattg
     4261 acttaccagt caatacttaa cctaagagta acatggagaa agttatgaaa aaatttctaa
     4321 acctacaccc taagttcatt cgctttgttt tcttacttgt tgcggtgttg gcttgcctat
     4381 catttgctta ttcacgatat gaaaattatc ggttaactcc acgtatcagt gaggaagtga
     4441 aaaatgctcc cttaaagatt gatactagtt cagtagagtt agaagatggt aagtcctatc
     4501 gactaccgag aaacattgct aatttagtag gtgtttataa agggcttgag aatgggcatg
     4561 aagttcaagt aagagttaat cctgacggta cctatgaaat aattagtaag ggggagcgcc
     4621 ttactgaaac atatttggat aagaatggag agcttcgcta taagcaggaa gaaacggttg
     4681 gattagaaat aggtattctt gtagaggagc atggttatgt tcgattttat cggtataaag
     4741 atactataga tgatgatgcg ctgatggggc tagagatatt atcaaatggc ttatatatag
     4801 atagtgatgg taaagttgat cttttaaaat ccatgttcca gaagcttcgg agagaagcag
     4861 ttttccgcca taatgaatat gttccgcaag atgtactgac gattgatgaa acaaatgcag
     4921 tgtttactcc taatttttta ctgtttgaca aggagaaact ggttagctat tcctattata
     4981 gtgcacatag ttttaaagat ggtcccttta agactagtta tactccaaaa tctgaattca
     5041 caaaatccaa agatgtttat gacatttggg ctcaaccgat tgagaaatgg acaatcgagg
     5101 aagtcttgat agaggaagtc accttatccg actttttaca aatgtatggt tcgagtattc
     5161 ggaaaacagc taaagggctg tggcagattg ctaatcagac aattaaagag cctacagata
     5221 cagagttgga gatttatatt aaagaaaacg gtcgagcttt aacagatgaa gaattggttc
     5281 atatcaagaa gaagtacgga gtggagtttg atgtttcgtt tggtattgag aataagggat
     5341 attttacgac cataaatgtt ttcggctggt ctgaggatac tggttttgac gaatttgggc
     5401 tcctgaagga gaatgggagg ttttaggaaa catatgttat caatagcatc agatattgtc
     5461 acgattattg ggggtctgac cattgtagga agtctttatc agtatctaaa agcaaaaagt
     5521 tttgagaaag aagtatcttt tctggaaatc attgacagtt ttaattcttc tattgaagtg
     5581 attgaagaaa aactagagct aattgagggg tggaatgatt atattctata tgaggaaggt
     5641 ccggaggtat ttgataaaca attaaatcaa ttacggatgc aggaaagtcg ttctcaaaag
     5701 aatatgcttt atttggatct gctaaagaca ctttttacct attcaggttc aatgcctttg
     5761 caggatattt ttgaaagcga tccgtatatt gttggagaat tggtagagtt gcttgttcaa
     5821 aaatcagagg ctctcctgtc tgactataag acagaacaga tagtcagatt tcgtaagtat
     5881 tgtctgcagc tatcggacga ctacctttct attcataaag gtggtatgga ggaagaggat
     5941 gttatgagat ataaggaatt acacttagac atcctcaatg atgtaaaaag ttctttagaa
     6001 aagtatgtaa aggagaaagc gttatgaaaa agtatttatc ggctatagta ttggttttgg
     6061 gaaccctttt cttggttgct tgcagtaagg ctgaggaagt tgttgtagaa actattaata
     6121 atgtagatgg acgttatatt gccaatgcct atggttttga gtttgaactt gaaattgatg
     6181 gtgaaactat tactggtgaa gccagtgttg gtattgtaga tagtgatatt gctggtagcg
     6241 tggatttgca agggcaagag atagacatcg atctttcaga tagcaaatcg atttcaggga
     6301 cctatgaaaa attagaaaat ggagatttag aggtcgattt ttcagggaag atgattgtat
     6361 ttgaaaagca gtagtaggaa aataggtgtg tcgatgagga aaaatataca tgcagttatc
     6421 atgggtttac taatagtggc tctattatgg tttgtctacc aaattttcga tatacagaag
     6481 aaaacggaac aatacaaaga cgctgttgct gcttttgttg gtactgttga aagcaagaat
     6541 tatggcgaag ctctttcaca actatctcgg ttagaatcgt attcactttc aaactctaag
     6601 ctgatagaag caaaggaagt aactcgcatt ttgaaaggag atttaactag tctagaaaat
     6661 cgtcagaaag ctttgaagct agaaccggtg gaattcctga caggttattt caatgctcag
     6721 tttacaccag gtacgactta tttagttagt catgaccgtg atatgatgtt agaatatgaa
     6781 acaaaagcgc ctgaaattgt tagaaactat ataattggaa atactttcta tgagtatgat
     6841 ggtcatgggg gtattgatta tgataagttt atcaaaattt ctgaagatgg taatgttaat
     6901 tacttatctc gtacaggaaa aatcggacgg ataagagttt atttgaataa agttgaagta
     6961 ttcttgcaaa atgtcaatgg tgatgaaatt tatgagtggg gaatatggga tattgaaagt
     7021 agtgtaattg attctacatt atatacaagc agaaatggtc gggcaataga tagggtttat
     7081 gaggctagtg gctacacaaa ggaataggag aataagatac gatgaaaata aaattggttt
     7141 atactctact gattctggct ttgggagcag cgataatgac gtattttgtt actcaggata
     7201 agtattttga tttaatagat tcaaaatata ttcttcaaca gctaggcgta gaatagagag
     7261 tacttcgcaa aaatcgctaa ataatcctta gtgaaaatcg aagaggcttc ggcctctttt
     7321 tttgttttga ttgctgaaat atagctgttt ccttatgcta agaaacaagg atggtataag
     7381 ttgtttctga tttggaaact ttagaatttg aaaaatctga ttacgaggcg atagttttta
     7441 gatttcataa catttgtgaa aaaaatatct ttatgcaaga aaaaatacag aaaatatgat
     7501 acaatggtaa agtaaatata atttaaggag ttcttatcta atggcaaaat tgactgttaa
     7561 agatgtagaa ttgaaaggca aaaaagttct tgttcgtgtg gacttcaacg tgcctttgaa
     7621 agatggcgtt atcactaatg ataaccgtat tacagcagct cttccaacta tcaagtatat
     7681 tcttgagcaa ggtggacgtg caattctttt ctctcacctt ggtcgtgtta aagaagaagc
     7741 tgacaaagaa ggtaaatcat tggctcctgt agcagctgac ttggcggcta aattgggtca
     7801 agacgttgct ttcatcgcag gtgctactcg tggtgctgaa ttagaagcag ctatcaatgc
     7861 tttggaagat ggacaagttc tccttgttga aaacactcgt ttcgaagatg ttgatggtaa
     7921 gaaagaatct aaaaacgacg aagaacttgg taaatactgg gcttcacttg gtgatggtat
     7981 cttcgttaac gatgcatttg gtactgcaca ccgtgcacac gcatcaaacg ttggtatctc
     8041 agcaaacgta gaaaaagcag tagctggttt ccttttggaa aacgaaattg cttacatcca
     8101 agaagctgtt gaaactccag agcgcccatt cgtggcaatc cttggtggtt caaaagtatc
     8161 tgataagatc ggtgttatcg agaaccttct tgaaaaagct gacaaagttc ttatcggtgg
     8221 tggtatgact tacacattct acaaagctca aggtatcgaa atcggtaact cacttgtaga
     8281 agaagacaag cttgatgtgg caaaagcact tcttgaaaaa gctaacggta aattgatctt
     8341 gccagttgac tcaaaagaag ctaacgcatt tgctggatat actgaagttc gcgatacaga
     8401 aggcgaagca gtttcagaag gcttccttgg tcttgacatc ggtcctaagt caatcgctaa
     8461 gtttgacgaa gctttgactg gtgcgaaaac agttgtttgg aacggaccta tgggtgtatt
     8521 tgaaaaccca gacttccaag ctggtacaat cggtgtaatg gacgctatcg tgaaacaacc
     8581 aggcgtgaaa tcaatcatcg gtggtggtga ctcagctgca gctgcaatca accttggccg
     8641 tgcagacaag ttctcatgga tctcaactgg tggtggtgca tcaatggaac tcctcgaagg
     8701 taaagtgctt ccaggacttg cagctttgac tgaaaagtaa aaaatgcgat gaaaagagtt
     8761 gggaggccaa ctcttttcta gtgcaaaggc tagattttct gtgaacgtag tgagtttgga
     8821 aaatcagcct aggtaaaggc taaaatgcaa cggatttccg ttgcattttg tgtatcgcgt
     8881 agagtttcta cgaagctaag cgaaacaaga tgtacttcca ggacttgcga cggcacggag
     8941 tgcctagtgg catgcctagt ctttttggga ggtgtgacct agaaagactg gctaggtgct
     9001 gccttgactg ggaaataggc ggtgagtcag ttcaacatat ctgggagata tgttgaggtt
     9061 agaaatagaa gaagcgaagc ttctgtcaaa aatgattccg tagattgtta ctttgatttt
     9121 tcttggtgac aacttcaaat agttcactgg gctatttgaa ccccgcaagg ctgaatcttg
     9181 gtcacaactc ccattcagct actgcgcaaa aaaatataaa tgtaaaaaaa gacattgttt
     9241 ttttgcagcg tctatttgtt tggcttactt ctgggttcct tcttgcagct gatttaaagt
     9301 ggcagattat tggtttttcg aaaagctggc gtgaacagga ggcttttcca gtcgagctta
     9361 ggagaaaaga aaagctgggc aggtatttgc tattctattt tccgaaatca tgttagaata
     9421 gaggtatgtt taaaaaatat acatttgatc caaagaaatt tcggttgggg atgcggacgt
     9481 tcaaatcggg tttggcagtc tttctagtta ttctactctt tggctatatg ggctgggaag
     9541 ggattcagat tgcggctttg acggctgtgt ttagtttacg agaagacttc gatcagagtg
     9601 tccattttgg agcttctcgt attctgggta attctattgg cggtttttat gcgctacttt
     9661 tctttatttt ggataggtta ttcttagatc atttttgggt aactgcggtt tttgttccga
     9721 tatttgtcat gttaacgatt atgacaaatg tggcgatgaa taataaagcg ggaattattg
     9781 gtggtgtatc agctttatta attattacat tgtctattcc tgctggtgat acgattcaat
     9841 atgtgtttat tcgtgtgttt gaaaccttta tcggagtttt cattgcgatt ctagttaatt
     9901 atgatgtgaa tgttataaaa aaacgttttc aggataaata atgttataaa atgtaacatc
     9961 gcctattgac ctcaaaaaaa aattctccta taatggtagg cagaaaggag ttcgttatga
    10021 gagaaaaaga gtttcgtcgt tccttagcca tctttccgat cggtagtgtg atgaagttga
    10081 cagatttaac tgctcgtcaa attcgttact atgaagatca aggcttgatt aagcccgatc
    10141 gcaacgaagg gaatcgtcgc ttgtattctc taaacgatat ggacttactt ttagaaatca
    10201 aggatttttt ggatgaaggt ttgaatattg ctgcgattaa gaaggaatat gcaaatcggg
    10261 aagcgaaagc taaggtccaa aaacagcaga aaaccttgac tgatgaagat gtccgtcgaa
    10321 tcttacatga tgaattcagt cgtcagggac gattttcaag tcctagttcc attttccgtt
    10381 cgtcgtaatt agcttttaaa atagaggaga aaaataatga cattcacagt ggcagatatc
    10441 aagcgcgata tcaaagagaa aaacgttacc ttcctacgtc ttatgtttac agacatcatg
    10501 ggagtgatga aaaacgtaga aattccagca actgatgagc aggtcgaaaa ggttttgtca
    10561 aataaggtca tgtttgatgg ttcatctatt gaaggatttg ttcgtatcaa tgaatcagat
    10621 atgtatcttt acccagactt ggatacatgg actatcttcc cttggggtga tgaaaatggc
    10681 cgtgtagctg gcttgatttg tgatatttat acaacagatg ctaagccttt tgctggtgac
    10741 ccacgtggaa atttgaagaa atcgcttcgt cacatggaag aggcaggttt ctcttcattc
    10801 aaccttggtc cagaaccaga attcttcctc tttaagatgg acgaacaagg aaatccaacg
    10861 cttgaagtaa atgataaagg tggttacttt gacctcgcac caacggactt agctgataat
    10921 acacgacgcg aaatcgtcaa tgtcttgaca gagatgggct ttgaagttga agcgagccat
    10981 cacgaagtgg cagtaggtca gcatgaaatt gacttcaaat atgcggatgt cttaaaagct
    11041 tgtgacaata ttcaaatctt caagttagtt gttaaaacaa ttgctcgtaa gcatggtatg
    11101 tatgcgacat ttatggccaa gcctaagttt ggtattgctg gctcaggtat gcactgtaac
    11161 atgtccctct ttgacaagga tggaaacaat gccttctttg atccagagga tcctcgcggt
    11221 atgcagctgt ctcaaactgc ttaccatttc cttggtggtt tgattaagca tgcttataac
    11281 tatactgcta ttacaaaccc gacagtgaac tcttacaagc gtttggttcc aggctttgaa
    11341 gctcctgtgt atattgcttg ggctggtaaa aaccgctcac cattggttcg cgtacctgca
    11401 tcacgtggaa tgggaactcg tttggaattg cgatcggttg atccaactgc caacccatac
    11461 ttagctatgg ccgttctatt ggaagttggc ttggaaggta ttcaaaataa aattgaagca
    11521 ccagcaccag tagaatctaa tatctatgca atgtctgatg aggagcgtcg tgaagcaggt
    11581 atcactgatc ttccttcaac tcttcacaat gcattgaaag ctcttcgtga agacgaggta
    11641 gttcgtgcag ctctaggtga tcatatctat acgaatttct tagaagctaa gaaaatcgaa
    11701 tgggcaagct acgcaaccta cgtttctcaa tgggaaattg acaactattt ggatatgtat
    11761 taaacaaagg accccgacgg gtcctttgtt catgagcttg aaaatcagag agcgagtaat
    11821 gacgtttgga ccattttttc atgagcttga aaaccagata gcgaattaga ccccgacggg
    11881 tcctttgttc acgagcttag aaattttaga gcgtgtaatg gtccagtgga gtgaaatagt
    11941 ctgggaagag actgtttcag tctgagctaa taaatagcag ggcgagggga tggacatgag
    12001 cttgaaatcg gtctttttat aagctgggtt atcttgttaa tataaaataa atcccagagg
    12061 tctcacctct gggattttag tgtgttatcg gtcaggcgtc agaatcattg ggataatgat
    12121 tggttcacgc tctgtttttt cgtataggaa tggtcgtagg gcgttaacaa tggcgccgtt
    12181 gactgtttgg atattggcat ctttgttgcg catggcgatg cggatagcgt tgaaaaggac
    12241 gcgttggctt tcgcgaatga gctcgccaga ttctctcata tagataaaac cgcgactgag
    12301 gatgtctggt cctgctaata tcatcttaga attaaaatcg acagtggcta ctgcaaggac
    12361 aacaccatct tctgaaagat cgcggcggtc ttttagaaca gctgcgccga tttcaccgat
    12421 gcggtttcca tcaacataga tgtcttgggc gttgaattga cctgcgagac gtgcagaatc
    12481 ttttgtcaga gcaaggacat ctccgttttc catgatgaag atattatctt tgggaacgcc
    12541 tgtatcaaca gctaggctgg catggatttt ttgcatgcga tattcaccat ggacaggcat
    12601 gaagtatttt ggtttgatca agcggagcat gagtttttgc tcttgttgac caccatgccc
    12661 agaggtatgg atgttgttga tcttgccgtg aatcacatcg acaccggctt caatcaagat
    12721 attgatgaga ttgttgacac ctgtggtatt tcccggaata ggactggacg agaagataac
    12781 cgtgtcgcct ggctggagtt gcacttgacg gtgggtaccg tgggcgatgc gagagagtgc
    12841 ggccataggc tcaccctggc tacctgtaca gagaatcatg atctcgctgg cagggtattc
    12901 tttgatctcg tttggctcga tgaaggtatc cttaggcacc ttgatgtatc cgagctcgat
    12961 accgttaaca atggcttttt ccatggaacg tccaaagaca gcaatcttgc gtccggtctt
    13021 aaccgctgca tcagccgcct gttggagacg gaagatgttg gaagcaaagg aagcaaagat
    13081 gatacgtcca tggatgcctt caatcagctt cataatggac tgaccgacca ctttttccga
    13141 gttggtgaag gttgggactt cagcatttgt cgagtcggag aggaggcaga gaacgccttc
    13201 ttcaccgagg gcagccatgc ggtgaaggtc tgctggctcg ccaactggag tgaagtcgaa
    13261 cttgaagtca ccggtacaga cgatttttcc ttgcggggtg tcaacgacga taccaagtgg
    13321 ttctggaatg gagtgggtgg tgcggaagaa gctgaccttg aggtgcttga aggtcaactc
    13381 tgtattatga ttgatttcat gcaaagtcgc atcacggagc agaccgtgtt cttccaattt
    13441 gcctcgaata agggcgaggg ctaaaggtcc agcatagatt gggacattgg cctgcttgag
    13501 taagaaggga atgcctccga tgtggtcttc atgcccgtgg gtaataacca gacctttaac
    13561 acggtctagg ttttcaacga tgtaggagta gtctgggata acgtagtcga tacccaatag
    13621 gtcatcttct gggaacttga taccggcatc gacgatgaga atttcatcct tatactcgat
    13681 accgtaggta tttttcccga tttctcccaa accaccgatg gcgaaaacgc caacttcatg
    13741 aggttttaga ttgactgatg acatggatta aaactccgta attttgaaat ctgcgtgctc
    13801 tttctcgtat tcaagatgat tgtctgataa gaggtcgata aattcgatat tgtattcagg
    13861 gcggttggtt tccaccaatt cacgcgcgat aatacgacct tccaattctg atgcagcatc
    13921 gatgtctaga taaagagcac gtgtctgctc gcgacgtggg ctaatttttg attcttgata
    13981 gaatacttta taaatcatgt gtagtatagt tcctttcttt ttgactggca actatgaaaa
    14041 aagccccaaa cagttggggc tgtctggtaa tgcctattca attttctcga gttgtcaatt
    14101 tattcagtct aaatgtactc ttcattatac cataaaatat gctgatggta aaagggtttg
    14161 gtaggaaaat ggaaaagtgt catgattttc agaaattcgg tatttcagaa gtggataaat
    14221 caaagaaatg agttaggatt ccgagtgtgt tgggattact aagactaagt tcaattgtgc
    14281 tgagaaatgc ctgtcaactg ccagatagtg atgtgactta ctagaatgac aaatcggttc
    14341 gatccattaa cctactagaa atcacaaccg attcttttca ttatttgaaa aaaaggtcaa
    14401 gatggcttac aatagagagt agcattgaaa tactcttcga aaatcaaaat cagacgttgt
    14461 tgacttgatt tgatgagtga aaggctccag tggagccttt cagcctgtta ccttgaaaca
    14521 aaatagtaac agggttctat ctgctaagta gaaacgaact acgttcgctc tatctccaac
    14581 ctccaaaggt tccccaaacc tttggagcta gtctgatttt gattttcatt gagtataagg
    14641 aaagaggaga agatgaaaat actagcttta gacagctcca atcaggcttt atcagtggcc
    14701 ttggtggagg acggtcgttt gcaggcggaa accctgttgg ctgtcaagaa aaatcatagt
    14761 atcagcctca tgcctgtggt cgattttttg gtggctcagg taggctggac gcccaaagac
    14821 ttggatagga ttgtggtcgc tcaggggcct ggctcctaca cgggcctgcg ggtggcggtg
    14881 gcgactgcca agaccttggc ctacaccctc aagatagact tggtggggct atccagtctt
    14941 cagtctctgg ttcctcccag cctgacgggt ctggtggtgc ccctcattga tgcccgccgt
    15001 aactgcgtct atgcaggtgt ttatgaaaat ggcagagcag tcgagccaga ccgctactgg
    15061 tcttttgaag acttgctttc tagcctggct ggcaaggaaa atatcacctt tgtcggagaa
    15121 gtagcaaact ttatcgagca aatcgagcaa gctctaccga ctgctcagta tcaagccagt
    15181 ctgccgtctg cctatcagct agcagtaatc ggtcaagact tgccggcagt agatgtggcg
    15241 agctttgagc ccaactatct caagcgggta gaggcagaag aaaactggct caaggacaac
    15301 caagctggct cagagagtta tatcaagcgt gtatgataga gattaaacac tacgacggcc
    15361 aggaaaatct ggcggaggct gttttggcag ttatgcagtc agtttacgaa acatctccat
    15421 ggactttgga acagattgtg actagcctag ccagtcagga tgaggattat tatctggcct
    15481 atgagggtca ggaattagtt ggatttttgg ctgttcagac ggtgctggat gagatggaaa
    15541 tcttgcagat tgctgtcaag gctgattttc agaggttggg aatcgccagt cagctgatgg
    15601 ctgctgtgat gggctgggat ggagacatct tcctcgaagt gagggagtcc aatagcgcag
    15661 ctcaggccct ctatgcacgc cagcatttta ccaaaatagg aaaacgaaaa gactactacc
    15721 gtaatcctgt cgaggacgcg gtgctaatga agagagaacg gaatgaaaga tagattgatt
    15781 ttggcgattg agacttcgtg tgacgagacc tcggtggctg ttttgcggaa tgaggcggag
    15841 ctgttgtcca atgttattgc cagccagatt gccagccacc agcggtttgg tggggtggtg
    15901 cccgaggtgg ccagccgtca ccatgtggaa gtgattacgg cctgtatcga ggaggccttg
    15961 ttggaggcgg aagtgacggc agaggacctg acggctgtgg ctgtgaccta tgggcctggc
    16021 ttggtcggtg ctttgctggt cgggatttcg gctgccaagg catttgcttg ggctaacggt
    16081 ttgccactca ttcctgtcaa tcatatggca gggcatttga tggcggcgcg tgcggtcaag
    16141 gagttggagt ttccgctttt ggctcttttg gtcagcggtg ggcacacgga gttggtctat
    16201 gtgtcagagg caggtgacta caagattgtc ggtgaaacac gggatgatgc ggtcggagag
    16261 gcctatgaca aggtggggcg ggtcatgggt ctgccctatc cagctggtcg tgtgattgac
    16321 gaattggcac atgaggggca ggatatttac gacttccctc gtgctatgat taaagaggat
    16381 aatctggagt tttctttctc aggtttgaaa tccgccttta tcaacctcta ccataatgcc
    16441 cagcagaaag gggaaacctt gtctaatgcg gacctgtcag cttctttcca agcctgtgtt
    16501 atggacatcc tcatggctaa aactaagaag gccttggagc aataccctgt caaaaccttg
    16561 gttgtagcgg gcggtgtggc agctaatcag ggcttacgag agcggttggc ggctgaaatc
    16621 accgatgtgg aggtcatcat tcccccgctt cgcctctgcg gtgacaatgc gggcatgatt
    16681 gccttggcag cggtcagtga gtacaataag gaaaaccttg ctggctggga cctcaatgcc
    16741 aaaccaagtc tagcttttga gaatttatag aataaaaacc tcttacgtca aggatacgta
    16801 agaggtttat ttatggattt ttcgccagcg atttggagaa atttggtaat gtcttttaaa
    16861 agcagttgaa aaattgaatt ggttggagta gccgatttct tcagcaattt cctgtagtgt
    16921 cttagtggtg ttttttaaga gttcgcaggc ttcgctgagt cggtattgga tgataaattg
    16981 ttgaggtgag atgttcattt gctccttgaa taaccgactg aagtagtggc gattgaggtt
    17041 gcatacttgt gccaaatcat cgacggatat agctttctca tagtttcgtt ctacgaagtt
    17101 gatggcctct cgtatataaa attccttgtt ttcatcgtgt ttgctgcttg ttttggtcag
    17161 agagcagtcg atgagatagg agataaagag gtagaggtgt ccaagaaggc aggcgctttt
    17221 ttggtgatgg agcgcgagaa tttgtttcat ttcatggtag acagggctag aggtgggcat
    17281 ttctcgttgc gaaaaaatag gttgctcttt tgagagtcct gcttgtctga gaaaatgctc
    17341 agttttcaga ccgtcaaatt caagccagat ataggtccag gggtcctttg cgtctgcttc
    17401 gtagctacag atggcatctg gggagataag aaagccctgt cctgcggtta agtggtattc
    17461 acgttggtcg gaggtatcgt aaaaagtacc tgaaccagag atgatgtagt gaaacaggta
    17521 gtgttgtttc atagttgggc cgaatgagtg aagtggctta caggcttcca tgccaaattg
    17581 gatggggtaa aaatctacat aggatctgtt attaaagacg taaaattcag gttgtatttt
    17641 cattgtattc tctccacaaa aattgtaaag gcttacaaat agtataacat atttatatgt
    17701 aaatgtgaca ttttatttga aaaaattaaa aaatatccca aaatcatata gaagatgtca
    17761 aatattccta ttttattata aagcgcttac atgctatagt tatagtagaa acaacaaagt
    17821 tcgtcgacgt attcgacaaa agaaaaggag tattaccatg aagaaatttg gtcgctatgt
    17881 taccttgctt gcggctgcag gcctactggc agcgtgttct acttcgactg agtctagtaa
    17941 agctacggaa ggaagtagtt caggaaagac agaaatatcc tatgccattt gggattctgg
    18001 tcaggaacct ggtttgagaa agattgcgga tgaatttgag aaaaagaatc cagatattaa
    18061 aatcaatatt caagtatctg actgggattc ttactggacc atgttagaag ctggtgcgac
    18121 aggtggttca ttgcctgata ccttctggat gcattcaaat gagatttatc gctatggttc
    18181 caatgaaatg ctattgccat tggatgaata cttagccaag agtgaagatg ctaaactagc
    18241 taatttccca gatggtttga atgaaatcta caacataaat ggtaagcaat acgctattcc
    18301 aaaagatttc gatacaattg gtctttggta caataaaaaa ttatttgacg aagcaggcat
    18361 tccatatcca gatgacactt gggattggaa caagttgaaa gaagtggcaa aacaattgac
    18421 caagccagat ggtagccaat atggttttgg tgctggtttg agtaaccaag agggctacta
    18481 caactttatc tatcaaaatg gtggtaaggt tattactgat gatttgaaat caggatacga
    18541 tgatcctaag accattgaag ccttggatta ctactttagc tttgtcaaag agaaaatttc
    18601 accagctatt acagtggata aagagcgggc cgaagcattc caaaacggtc aagtggctat
    18661 gagcgtcttc ggttcttgga atttatctgg tttcactgct aatgactaca ttcgtgaaaa
    18721 tgctgatgta gctgtcttgc caaaaggacc agatggaact cgtgcaacca tctttaatgg
    18781 attgggtcat gccattgctg ctaccactaa acagcctgat gccgcttgga aatgggttga
    18841 atacctcagc tcaaaagagg cacaagaaat gcaggcaaca cttggtgtgg caatctcggc
    18901 ttataaaggc gcggcagata cttgggtaga ttcaaataaa aactttgcta tcaagaacta
    18961 tgttgacatg gtggattatg cacagattcg tccatattca caaacaacca tcaagtggga
    19021 agataaggct tacgagctat tgaaacctgc ttatcttgga gaaaaagcaa ctgaagaagc
    19081 tgccaaagaa acagctgata tgatgaatgc tgaattagca actgaaaaat aggtaggagg
    19141 tcttgggaag ttgattcttc cccggacctt cttattaaat gaagaaggat ggggataaga
    19201 tgttccgaaa aaaaggaagt ttaaatgagg caatttgggg atgggcaatg gtagcgccga
    19261 ccattatcgg attggttgta ctgaacatta ttcctatttt ccaaaccatg aagatgagtt
    19321 tccataagag tggagatttc ggcaaaggtg acatctttgt cggcttggca aattaccaac
    19381 gaatgttagg ggatgcgcaa gtgtggcagg caacatggaa taccttgaag tatacggttc
    19441 tagttgttcc agctaccgtt gccttggcca tgttgcttgc ggttttgctt aattctaaga
    19501 ttaaaggtaa gcatatttat cgaaccattt tctttttgcc tatggtggca gcaccagccg
    19561 cggtgaccat ggtttggaaa tggctctaca atacggactt cggtctgatt aactatgtct
    19621 tgcgtcgttt gggactgggt gctgtgaact ggattgaaga tccaaagatt gctctctatt
    19681 caattgctct gattggaatt tggagtactg ttggctatag catgatttta attttagctg
    19741 gtttacaaga aattccaacg gatttttatg aggcagctcg cattgatgga gctagtccag
    19801 ccaagcaatt tttctccatt accctgccct tggtttcacc aactctgttc tttgttgtgg
    19861 taaccagcgt tattcaatcc atgcaagtct ttgatgttat ctatatgatg gaagacatcc
    19921 gaagtcctgc ctatgataag acggtatctc tggtttatct gttttacaat aattccttta
    19981 aatattcgga taagggctac ggttctacca ttgtcatgtt gttgttattg attattcttg
    20041 tcattacttt cgttcagatg aaggtacaga aaaaatgggt gcattaccgt taaggaggtt
    20101 catgtgaaac aatcagcttt taaatcaaca atctggatgc atgccttctt gattttagtg
    20161 gcaatgggta tgctgatccc atttgtttgg atggtgttga cgtcttttaa aacggtaaca
    20221 gaatccactc agatgaatcc tttccaattt ttaccaagta agtggatggt gagcaattat
    20281 acggaggcta ttcggactaa taattttccg atactctatc tgaacaccat tttgatgatg
    20341 ttatggcgta tctttagctc ggttatgttt tcagctatgg cagcttatgc ctttgctcgc
    20401 ttggaatttc ctgggcggaa tgtcttgttt ggtctggttc ttttccagat gatggtacca
    20461 cctcagttat tcgtcattcc tcagtatttg atgattgacc aacttggtat gcgcaatacg
    20521 atttttgctc tggtatttcc aggaattgtc agtgcctttg gtacgttctt actccgtcaa
    20581 tttttcatgg gtcttccgaa agaattggag gaatctgcga aattggatgg ttgtaatatc
    20641 gggcagacct tctttaaggt catgttgcct ttggccaagt ctggcttgat tgccttagcg
    20701 atttttacgg ctttgtttgc tttcaaggac ttgctgtggc cattgattat caactcagaa
    20761 gctgacaagg ctaccctgtc tagcgcactt tctaagattc agggagctta cgctgttaac
    20821 tatcctcagc tcatggctgc aagtgttttg gctatttggc cgatgttggt actgtatgtg
    20881 atattccaga agcagttcat ccaagggatt gcgacatctg gtggaaaatt ataggaggct
    20941 acaatgggaa ttatctttca tgaaaagaca aaggaattcc atctttacaa tgagtttatt
    21001 agctatgtgt tgacggtctt gcctaatggt catattggta gtttgtatta tggaaagcgt
    21061 gtaacagaaa cagcttccta tcagtatgtg cgtgaagatg agtatcgtgc tttgacttcc
    21121 tttgtagaag acgatgaccg tttcttttcg ctccaatatg ccaatcctga atttgcttgt
    21181 tatggtacaa cggactattt ttctccgact tttgagttgg tgcagaagga tggtagtagc
    21241 ctgtcgcact ttgtgtatca aggtcatgtg atttatgctg ggcgatcggc tttgaagggt
    21301 cttcctcatc tctatctgga tgaggagggg caggcagata gtttggatat ttatttgttg
    21361 gatgaacagt cgcagacccg cctggtcttg tcttatacga tttttcgaga ttatccagcg
    21421 gtgactcgct ctgctcgttt tgaacaactc ggagaaaaat ctgtctgttt gaaccgtgcc
    21481 ttgagtatga cactctgtct accagatatg gactatgagt ggttacattt ggatggggct
    21541 tgggggcgtg agcggcatct gcaagtatcg ccgcttcatc aaggttgtca gtctatttac
    21601 agtctcaaag gggctagtag tgcggagcac aatcccttta tggctttgaa acgcccaact
    21661 gcggatgagc aacagggaga ggtattgggc ttctcgctcg tctatagcgg aaactttttg
    21721 gcgcaggtgg atgtgagttc tttccaaaag acgagagtga gtatgggaat ccatcctgag
    21781 cgtttttctt ggacattaga taagggagaa gagttccaga cgcctgaggt tgttatggtt
    21841 tatagcgagc atggtttgaa tggcatgagc caaacctatc accgcctctt ccaaaaacat
    21901 ttggtacgtg gctattggcg tgatagagaa cgacctgttc tcttgaataa ctgggaggct
    21961 atgagttttg attttgatga ggaaacaatt ctttccttgg ccaaagaggc tgcaggtctt
    22021 ggtgttgaac tctttgtcat ggatgatggt tggtttggca agcgaaacca tgaccgagca
    22081 ggcttgggag attggacggt caaccgagag aaattaccaa gtggcttgac agggattatt
    22141 gaccaagttc atgctatggg aatgaaattt ggactttgga ttgaacctga aatggttaat
    22201 aaagacagcg atctataccg agcgcatcca gactggattt tccatcatcc tcagcatagt
    22261 caatctcacg gacgccacca atatactttg gatttgtcga gggaggatgt ttatcaaaat
    22321 atccatgacc aactccatcg gctgttgact gagcatgata ttgactatat caagtgggat
    22381 atgaatcgct atatgacaga ggtctttaca tgtacacggg aggcggagcg gcaaggtgag
    22441 accttccatc gctatattct caatctctac cgtttatatg atagcctaat agcagctttt
    22501 ccgacagtct tattcgaatc atgttcaagt ggtggagcta gatttgaccc aggaatgctc
    22561 tactatgcac cgcaaacctg ggtcagcgat gacacggacg ccatggaacg cttgaaaatc
    22621 caatatggaa cgagcatggt ctatcctttg aatagtatgg gttgtcatgt gtcagctagt
    22681 ccaaatcagc agttggggcg agctactcca ttaaatacac gtgccaatgt tgcattcttt
    22741 ggaagttttg gctatgaatt ggatttgttt gattgtagcc aagaagagtt ggaagagatg
    22801 aaggagcaga ttgcctttta caaggctcac cgtaagattt tccaacaggg tatctttact
    22861 cggctgaaaa gtccattcga tggagaaata acggcttggc aggtccaatc ctcggatggt
    22921 cagcaagtca tcgtgggtta ttaccgtcgg ttgacaactg ccaatcttgc ctatcaacgc
    22981 ttgtacttgc aggggttgga agaggaagcg gtctatcacc ttgatggaga agtttatact
    23041 ggtagccaat taatgcatac aggtttgtcg attcgacatg gagaccatgt tggagacaat
    23101 aaggacttta cttcttgttt gatggtcctt cagaaacaac agtagcatcc ctatccctag
    23161 acccagccat cggctgggtc tttacatatt gtctatatat gaaacatgtc caacaatgag
    23221 tgcaaaactt ttactcagat ataagagaag gcttgaaaaa cgagttacaa tgtgagaaaa
    23281 tgagagaata ctttttacga attgttaagg agatatggaa tgaaggaaca ctcttttcgc
    23341 gaaggcttgc gggatgccat tcccacagct ctgggctatg ccagtatcgg tctagcctgc
    23401 ggtgtcgttt cggtcaattc aggcatttcc gcagtggaaa tggctttgat gagcctcttg
    23461 gtctatgcag ggagtgccca atttgtcatg tgtgccatga ttttggcagg tgcctccttg
    23521 ttgtcgattg cggtgacggt tttctttgtc aacctgcgga attttctcat gtgtctccat
    23581 acgacgacca tttttcaagg caacagtctg gggtccaata tcctgattgg ctcttttgtg
    23641 acagacgagt cctatgcggt tctcttgcgg aaacacattg aggaaaagca gattgcacca
    23701 agctggatgt acggcaacaa ctttgcgagc tatgcttctt gggttatatt taccacttta
    23761 ggcaatctca tcggaggttt gattccgaat cccgagcagt ttggtttaga ttttgcccta
    23821 gtggctatgt ttgtcggcat tttctcaggt cagttggagg ccatggctcg gactattcct
    23881 ttgaaaaaaa tcggcttgat tttgctggcg gttggtctag cctatgtcgg tctgtctgtg
    23941 ctagtgtcgt cctatgttgc ggtgcttctg gcgacgcttt tgggttgttt tgtgggggta
    24001 atgattgatg ataaaaacta gcattttact gattattctg gtgtcggctc tagtgacctg
    24061 gctgccacgc gtcctgcctt ttgtcctgac acagaacaaa tccctgcccc cccgcatggt
    24121 caagttcctc agtttcctgc ccatcaccat tatctttgca ttgaccctgt ccagcatcat
    24181 ggacgaaaag gtgggatccc ttcccagcct tctccctgtc gaaagtctgg ccctcattcc
    24241 gaccttcttg gtggtcctga ggaccaaaaa tatcctcctc gcagtagtgg ttggtgtctt
    24301 gacgacagct gctctccgct tgcttttcta ggagggactt atggttaaga aaaatgccag
    24361 aggtgtggca ctttgtctcg tcttggctgg aataagctgg tgcttaggga gttggttttc
    24421 agtagtgggt gggcctgttt ttgcccttct aatcgggatg agcctgcact cttacatttc
    24481 aaggaaacat gcatttcagt caggcttgac ttttacctct aagaagattt tgcagtatgc
    24541 ggtgatttgt ttgggatttg gattaaactt atttgcggtc ctggcggtcg gtcgccaatc
    24601 gcttccaatt attctgtcaa ccatcagttt tgccttgttt ttggcatttc tgatgtggaa
    24661 aatcttgccc atttcatctc atctggcgac cttgattggc gttgggacct ctatctgtgg
    24721 agggtcagcc attgcggcga cggctcccat tgttcaggcg gatgatgagg atgttgcaca
    24781 ggctatctcg gtcatctttc tctttaatgt cttggcggcc ttgatttttc cgaccttggc
    24841 aacttggctt gggttttcga ccgattcggg tcaggccttt gggatgttcg ccggaacggc
    24901 ggtcaatgac acctcgtcgg taaccgcgac agcagctact tgggacagcc tttacggact
    24961 gggcagtcag accttggaca cggcagtgac cgtcaagctg acgcggactc tggccattat
    25021 tcccattacg tcggttttgg cgatttggca agctcgagga aagggagttc aggcagacaa
    25081 gaagtccctc ttggcaagtt ttccgacctt tatcctctat tttatcctag ccagtctggt
    25141 gactacaatc gcaggtcatc ttggactggg aacggaccta ttttctcctc tcaaaaccct
    25201 gtccaaattt ctcatttgta tggccatggc tgctattggt ttgcgaacaa atgtcttttc
    25261 tttggtgaaa aatggcagag ctgctcttct gattggtctg atttgctggc tgggagtgac
    25321 tgtgctgaca ctggtttggc aggcaatctt gggaatttgg taaagcaaaa ctcttcgaaa
    25381 atcaaaatta tccgttgtca acttggttcg atgaacctca gttctatcat caccttcgtt
    25441 tcctaggcta ctcttgattt tcattgagta taaaatagcc ttctcttgcg agaggctatt
    25501 ttttatgatt tcaagcgaaa agtctgcggg gcttttttca acaaaatcca gtagccgatg
    25561 ctgacatagg taatcatagc tatggaaatg agtaggatgt acaagtgact gcctaaatcc
    25621 agcttgatat tgagataggc cacccagtag agagccccac tgagaaattt atagactggg
    25681 ttgacaacct ccatgtcctt ggtaaagggt tggagaatat agtagataaa gaggtcgtgg
    25741 aaggaaaata gggttgttag actcagcagg agcagagcag ttaggagata ggtttcaata
    25801 ggtagctgcg ctctagtaaa gatgatgagg gccaataata gagatccaga gaaggcagca
    25861 tttaatttta cagtttgcag aaaacggtaa tgaaagcctg caataatggt ttttgcttcg
    25921 cggtaaaatg gatagtggag catggaaata tcgcaattaa caaagaccat ctgtgcgaca
    25981 gccttaccca tggaggcggc atacatgacc atgaaagcaa aaggcagtcc ctcgatatag
    26041 ttggtattgc ttatctgaat gtcatctttt gaaaaccaac gaattccttc aataaaaagg
    26101 acaatagcca aaagacaacc caagcgaaag tgcagttttt tcgtaaggac agaacgatag
    26161 cggtcaaata gcagagcgtt taagtaggtc atgcctgaca gatgagtcag gtcctttcct
    26221 gtttccatac tcagtttcgc ctgcatctgc aacccttgtc gggtgtactc gttccctttg
    26281 gtcatctcaa aaattttctt atccatctgc aaggactggt ccatgcaata atagaggtag
    26341 tctagatggt tggtttgttg cttcaaataa ccataaccaa accaaatcag caagacctga
    26401 caggcaagca taggcagtaa aaagatggga gacagatgat tgcggaaaag gataaggcag
    26461 gcaatagctg ctagaccagt actcaagata atccaagatt gccaagagtt tcgacgtgtc
    26521 aaaatacctc tgttgaatag tgctcgattg agagcctgtc cagtaaaact tcctgctgga
    26581 atggtcagta atcctagagg cagatagagc caatttcctg acaggctaga aaaaatcagc
    26641 aaggcaggca ggtaggccag actggtgata atgggctcta caaagagttg actctggaga
    26701 aaactagact gggaaagtcc aaaatttcgc atgaattccc gctcggactt ggcgataaaa
    26761 ggctcaaatc ccttgccaaa ccgataggtg tagccaacaa agaccatcca catggaaaag
    26821 cctagaagcc aagtatctga cgggatttgc caaaagtcca gctgattgtt ggataggagt
    26881 ttaatccaga aggtagcaat gcaagaatag atggttaacc aaattccctt gacaagaaag
    26941 cgactgggga tggagaggac gtgcaggatc aaaaagagac cagacttaaa actgtaagac
    27001 ttgaaaatac tctctggaat gcactttccc acaagcggca gtttccgaag atagtagaag
    27061 aatccgttga cggtccgata gaggttgtac ttttcctgat accaaaaata acgtagaatg
    27121 gttttcataa gcccctccta gtctgctgtc aagagggcaa ctacttcctg ttcgaagtca
    27181 ggatcatgga gtttttcgct tggaactgcc tgtaatttct gatgatggag caaaacaatc
    27241 tcgtcgcaga gatcttgagc cagttgtaag atatgggtgg aaaatataat gacggaatcc
    27301 ttcttagctt cccgaattag ttgtttgaat tcgtgggcag ccacagggtc aaaggaagtc
    27361 agcggctcat ctaagagaag gacaggtggc tggacaatca aggataggag caactggacc
    27421 ttgttctgca taccgtggga aaaatccttg agcaggcgat gttggtcttc ttctccgata
    27481 ccgactaagt tcagccattc ttctggactg cgaggagatt tgagcttatc cttgtgaata
    27541 tccatataga aacggacaaa ctcataggcc gtcataaagg caggcagttg tgggtaggtc
    27601 tgggtaaaac cgatgtccgt attgtcgtag tcaaaggcat tttcatcctt cacaaactga
    27661 atcgagccat tatccaaggt cagattacgg gcaatgcagt tgaacaaggt cgtcttacct
    27721 gccccattcc gccctagcaa accgtaaatc tttccttgtt caaattgaaa actggcatcc
    27781 tccagaataa tcttgtgatc aaatttttta gaaatagaag aaagtttcag ttgcatagtc
    27841 aatctccttt tgttatattg ttatggtttt atcatacaat aaaaaacaaa aaaattcaag
    27901 cagaattttg cttgaatttt tcagtcatta aataattagt agtgtactac tcaaagaaaa
    27961 tcgaactcag actagctcca aaggttcggg gaacctttgg aggttggaaa taaggcgaac
    28021 aaagttcgct acaaaaaggt tcggggaacc tttggaggtt ggagatatgg ggaacaaagt
    28081 tcgtgccatt agatgtagat agaacactgc taccttttat tttcgggtag caggctgtaa
    28141 agctccactg gagctttaca ctcatcaaat caagtcaaca acgtctgagt ttgatttacg
    28201 aagagtagga acttccagcc acccagccag ttgctaaaca gtaggtaatg ttaaagccac
    28261 ctgtgtgggc gttgatgtcc aagacctcac cagcaaagtg gagaccaggg attttcttgc
    28321 tttccaaggt tttggggttg atttccttga ggtcaacgcc gcccttggtc acaaaggact
    28381 tggccaagga catcttgccc gtaatcttaa tcggcagggc tttgaggagg gtgaccagtt
    28441 cagtcaggtc ttttttttgg acctgtttga ccttgcagtc gtagttctcc gcgaaaaagt
    28501 cggctaggcg gtctggcatg agttcagcaa gggcgttctt gacggatttt tctctgttct
    28561 tttctaaatg ctcaaacaaa tcttggtcag aatgggtcgg aagagcatcg agaaatgcgg
    28621 tttcgccgcc tttgacaaaa ctagacagac gaagagcagc gggtcccgac atgccaaagt
    28681 gggtaaagag caggtcgtgg gtgatgacgt gcttgccgta ggtcagggtg acgtcgtcca
    28741 gggaaatgcc ttgaagcttc ttatgtggga agtcggtcag gacagggctt tcagcagcct
    28801 caatctccgt gacttccagc ttgaagtggc gggcaatgtc gtgaccaaag ccagtcgagc
    28861 cggtggaagg ataggtcttg ccgccggtgg tgacaatgag ctgaggtgct gtaaaggttt
    28921 cctcgctggt cttgacatgg aagaggtcgt ccatcttgcg gacggaaacc acctcagtcc
    28981 ctgtacgaat gtccacgccg ttttccaaca ttttcatctc caggcacttg ataatggtct
    29041 gggaacggtc ggtggtcgga aagacacgac cgtggtcctc cactttgagc ttgaccccat
    29101 tttcctgaaa gaaattcatg atgtcatggt tgtcaaactg agaaaagacg ctgtacagaa
    29161 agcggccgtt gccaggaatg ccagccagca ggtcttccaa ggtaccgttg ttggtcacat
    29221 tgcaacgtcc gccgcctgtg ccagacagtt tcttacccaa acgcttgttt ttttcaagga
    29281 gcagggtttt cttgccgtaa aagctggaag aaatagcggc catcatgccc gcaggccccg
    29341 ctccgataat aatggtatct actgtattca tgcctttatt gtatcatatt ttcatcaaga
    29401 aagtagtttg agtctttgct atgatttgtg gagtttttcc ttgagattgc ggaagaccat
    29461 tgacgggtta ggggagtata cttagactaa gggaaattag tttttatcag gagcctgtat
    29521 gtacaagcaa agtaattttg tggaagctgc attgtgaatc caggttctaa caactccgtc
    29581 tgtagcatga aagaaagtag gtagaagaat ggtaactgag caaagagagt atcgttttcc
    29641 agaaggtttt ttgtggggat cctccacttc aggtcctcaa agtgaaggaa gcgtagctgg
    29701 tgatggaaag gggtggaata actgggatta ctggtacagt caggaaccta agctctttca
    29761 ccagcaaata ggaccggaac aaacatcgac tttctatgaa catttccagt cagatttgga
    29821 tttgttggtg gaaacaggtc atagtatttt tcgcacctct atacagtggt cacgtctgat
    29881 tccggaaggg ataggcgagg tcaatccgca agctgtggag ttttataggg ctgtatttgc
    29941 aggtattcga gagcgtggga taaagctttt ggtcaatctt tatcatttcg atttgcctta
    30001 tgtcttacag gaaaaagggg gctgggaaaa taaggagatt gtctgggcct atgaggctta
    30061 tgctcgccag tgtttcagtc tctttggaga tttggtggat cattggatta cctttaatga
    30121 acccattgtt ccagtagaat gtggctatct aggaagctat cattatcctt gcaaggtgga
    30181 tgcaaaggcc gctgtggtcg tagcctatca tactcaactg gctagttctt tggctgttcg
    30241 ggcctgtcac caactacacc cagaccacaa aatttccatt gttctcaatc ttactcctgc
    30301 ctatccaaga agtcagagtc cagaagattt acaggcagca cggattgctg agctatttca
    30361 aacgagaagc tttttggatc catctgtttt gggacaatac ccgagggaac tggttgacat
    30421 tcttgaaaaa cacggtttac gtccagaaac cacagaggag gaattgacca ttatcaaaga
    30481 aaatagggtt gatttcctgg gggtgaatta ttaccaaccc ctgcgcgtgc aggctccttc
    30541 agaagatgga tggaacggag aagctacttt cctatcccaa tatttccagc cttatgataa
    30601 gcctgacaag aaaatcaatc cccatagagg ctgggaaatt tacgaagaag ggctgtatga
    30661 cattgccaaa aatatccagg aaaactatgg gaatatcgaa tggttggtaa ctgagaatgg
    30721 catgggagtt gaaggagagg atgtttttga agaaaatggc atgattcagg atgattatcg
    30781 gattaacttc atggaagacc atttgattca gctccatcga ggtattgatg aaggagcgaa
    30841 ctgtaagggc tatatggtct ggacctttat tgactgctgg tcttggttaa atgcctataa
    30901 gaaccgatac ggtttggtct cgcttgacct ccaaactcag aagcgtactg tcaaaaaatc
    30961 tggatattgg ttcaagcaag tgagtgctaa aaatggtttt attagataga atgtatattt
    31021 cgtttctaca taacattgca ttgagataag atgcttttga ggtttgtgat tatccactaa
    31081 tgcttggtaa gaaaattccc ctagatttga cagggatagg gttctgtggt aatattttaa
    31141 tgatacaaac tatgagaaat gtaagtaccg aggatattat gggaatcgaa aaaacagtca
    31201 gtgagttagc tgaaatttta ggagtgagcc ggcaggctat gaataatcgc gtcaaatcac
    31261 ttcctgaaga atttgtagat aaaaatgaca agggtgtgac cgttgtaaat cgtgctggct
    31321 tgattaagtt ggaggaaatc tacaaaacaa ccatttttga agatgagccg attagcgatg
    31381 aagtcaagca tcgtgaattg atggaaattt tagttgacga gaaaaatgct gaaatcatcc
    31441 gcttatatag tcaattaaaa gccaaagata agcaacttgc cgaaaaagat gaacaactca
    31501 aggtcaaaga tgtgcagatt gctgagaagg ataaacagtt ggatcagcaa cagcaattga
    31561 cactaaaagc tatggccgat aaggaagttc tcaagttgga attggacgaa gttaaagcac
    31621 aggcagaaga agtgcaagct aaaggcttct ttgcacgttt gtttgggaaa taaaaaggtc
    31681 cgggggacct ttttatcatg agcttaaaag caagagagcg aataaaggtc cgggggacct
    31741 ttttatcatg agcttgaaag caagagagcg aataaaggtc cgggggagtg aaacagtctg
    31801 gggatagact gtttcagccc gagctaaaaa ctggaagatg atatgtgata taaaaagatt
    31861 ggtgggaacc aa
//
LOCUS       DBNFCX010000019        29618 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.019, whole genome shotgun sequence.
ACCESSION   DBNFCX010000019 DBNFCX010000000
VERSION     DBNFCX010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 29618)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29618)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29618
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.019"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..224)
                     /locus_tag="AC1PJC_000725"
     CDS             complement(<1..224)
                     /locus_tag="AC1PJC_000725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619746.1"
                     /translation="MKKHKIISFDSVSFILGGIFFVLYLALFESSFYKFPNILLTIYF
                     LLCLISFAFILDYYIKKVPQYSFVLRLFYVG"
     gene            complement(590..1279)
                     /locus_tag="AC1PJC_000726"
     CDS             complement(590..1279)
                     /locus_tag="AC1PJC_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HIP6619747.1"
                     /translation="MAKKILIAGKERNLSHFVSMELQKKDYLVDYASTGKEAMSLAHE
                     TDFDLILMSFQLSDMSSKELAAELLAIKPATVMIVVVEPTEVSQYGEEVLSYAVSYVV
                     KPFVISDLVEQISAIFRGRDFIDNNCKQVHMHAAYRDLKVDFQNRTVTRGDELINLTR
                     REYDLLATLMNSPEPVSREQLLERVWKYEAASETNVVDVYIRYLRGKLDLPHQDSYIK
                     TVRGVGYAMRD"
     gene            complement(1361..2788)
                     /gene="gndA"
                     /locus_tag="AC1PJC_000727"
     CDS             complement(1361..2788)
                     /gene="gndA"
                     /locus_tag="AC1PJC_000727"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004616 - phosphogluconate dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent phosphogluconate dehydrogenase"
                     /protein_id="HIP6619748.1"
                     /translation="MTKANFGVVGMAVMGRNLALNVESRGYSVAIYNRSADKTEDVVA
                     SNPGKNLVPSYDVESFVASIEKPRRIMLMVQAGPGTDATIQALLPHLDEGDILIDGGN
                     TFYEDTIRRSKELANSGINFIGTGVSGGEKGALEGPSIMPGGQKEAYELVADVLEEIS
                     AKAPEDGAPCVTYIGPDGAGHYVKMVHNGIEYGDMQLIAESYDLMQHLLGLSVDEMAD
                     IFTEWNKGELDSYLIEITADILKRKDDQGQAGPIVDYILDAAGNKGTGKWTSQSSLDL
                     GVPLSLITESVFARYISTYKDERVAASKVLPKPAPFAYEGDKAELVEKIRQALYFSKI
                     MSYAQGFAQLRVASKENNWNLPFGEIAKIWRAGCIIRARFLQKITDAYGRDEDLANLL
                     LDEYFLDVTAKYQQAVRDVVALAVQAGVPVPTFSAAITYFDSYRAENLPANLIQAQRD
                     YFGAHTYNRKDKEGIFHYDWYSESK"
     gene            complement(2885..3424)
                     /locus_tag="AC1PJC_000728"
     CDS             complement(2885..3424)
                     /locus_tag="AC1PJC_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceD family protein"
                     /protein_id="HIP6619749.1"
                     /translation="MFHIYDIQKNPDGISFDKTLDLQEELQARNGEVLGLSPVQVTGN
                     IRFESGFFFLDYQMTYDITLASSRSLQPVVLHEVQNVNELFVANEAVLKEQDLIDEDM
                     VLVVEDDHIVLDESVADNILLAIPIKVLTPEEEAGQELPSGQAWALMTEEDFQQKAQE
                     KKEANSPFAQLQGLFGDED"
     gene            complement(3434..4351)
                     /gene="trxB"
                     /locus_tag="AC1PJC_000729"
     CDS             complement(3434..4351)
                     /gene="trxB"
                     /locus_tag="AC1PJC_000729"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADPH) activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0019430 - removal of superoxide radicals
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HIP6619750.1"
                     /translation="MYDTVVIGAGPAGMTAALYAGRSNLKVALLERGIYGGQMNNTAE
                     IENYPGYDHISGPALAEKMFEPLEKFGVDHIFGNLVRIEEEGQIKKVITEDGVLETKT
                     VVLAMGAKHRLLGIPGEDTYNSRGVSYCAVCDGAFFRGQKLLVVGGGDSAVEEALFLT
                     QFAESVTIVHRRDQLRAQKVIQDRAFANEKINFIWDSVVEEIKGDDLRVQSVVIKNVK
                     TEEVSELDFGGVFIYVGLDPMTDTVADLGITDEAGWVITNEKMATSKSGIYAIGDIRQ
                     NQLRQIATAVGNGAVAGQEVYNYITELAE"
     gene            complement(4365..4589)
                     /locus_tag="AC1PJC_000730"
     CDS             complement(4365..4589)
                     /locus_tag="AC1PJC_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4059 family protein"
                     /protein_id="HIP6619751.1"
                     /translation="MLQNILSFYLQGLLIASLLIITSSLVWFIWRATKGVDKTLQERQ
                     DFLFDLLMINVMTIPIAAFGVVGILLMFKA"
     gene            complement(4607..5950)
                     /locus_tag="AC1PJC_000731"
     CDS             complement(4607..5950)
                     /locus_tag="AC1PJC_000731"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HIP6619752.1"
                     /translation="MKFTDMKLKPYIQEALKEINFVQPTEVQEKLIPVVLSGRDLIGE
                     SKTGSGKTHTFLIPIFQKLNEELDQVQAVITAPSRELATQIYQAARQLASHSDIEVRV
                     TNYVGGTDKNRQIDKLQASQPHIVVGTPGRIYDLVKSGDLAIHKANTFVVDEADMTLD
                     MGFLETVDKIAGSLPKDLQFMVFSATIPQKLQPFLKKYLSNPVMEQIKTHTVISDTIE
                     NWLISTKGRDRNAQILEVTKLMQPYLAMIFVNTKTRADELHSYLTANGLRVAKIHGDI
                     PPRERKRMMNQVKNLDYQYIVATDLAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTG
                     RNGLSGIAITLYQPSDDADIRELEKLNIKFLPKEMKNGEFVDTYDRDRRANREKSREK
                     LDLEMIGLVKKKKKKVKPGYKKKIQWAVDEKRRKTKRVEARAKGRAERKAKRQSF"
     gene            complement(6030..6863)
                     /locus_tag="AC1PJC_000732"
     CDS             complement(6030..6863)
                     /locus_tag="AC1PJC_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619753.1"
                     /translation="MEQFNQEQLYGVVIQTMTAASQLPMVKVNREEFLKTRFKDSPYL
                     DKIIADGPTAVFTTKALRKEAEKIINDMTTKTSLISFAAGLPGNPFTAVAAGTADIAQ
                     YFGFALNLSQQIAYLFGEDELFVGEGKEISEEVQIRIIAYIGVMFGAGGSAVLLNKVS
                     KIVGANIGKKVAMQALTKTTWYPLVKKVAAVIGVKITKKTVEKTIANAVPILGGLISG
                     GLTYFTFQPMGGMLADTFVKKINGDFDGELELTEAFKASLEEEKELGIIEAEFTEASE
                     S"
     gene            complement(6956..7954)
                     /gene="mraY"
                     /locus_tag="AC1PJC_000733"
     CDS             complement(6956..7954)
                     /gene="mraY"
                     /locus_tag="AC1PJC_000733"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HIP6619754.1"
                     /translation="MQFALMSGLVAFLATVLLIPRFITFYQAKRIEGQQMHEDVKQHQ
                     FKAGTPTMGGTVFLVVAILVSLLFATAFQLLTGGVLAILFILALYGVVGFLDDFLKIF
                     RKINEGLNPKQKLALQILGGIVFYFVHVRGAGGGELNVFGHMVHLGVLYFPFVLFWLV
                     GFSNAVNLTDGIDGLASISVVISLLAYSVIAFNEQKFDILLVCVTMIGGLLGFFVYNR
                     KPAKIFMGDVGSLALGGMLATISIALRQEWTLLLIGLVYVIETSSVMLQVSYFKYTKK
                     RFGEGRRIFRMTPFHHHLELGGLTGKAEKWSEWKVDFFLWSVGLIMSLITLAILYL"
     gene            complement(7956..10205)
                     /gene="pbp2X"
                     /locus_tag="AC1PJC_000734"
     CDS             complement(7956..10205)
                     /gene="pbp2X"
                     /locus_tag="AC1PJC_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein PBP2X"
                     /protein_id="HIP6619755.1"
                     /translation="MPRRNNKLLRYVLKKRYVPSKNRRRVGQSLLLLTVFVFFLFLIN
                     FAYIIGTDSKFGVDLSERADAVHQREVTVQAKRGTIYDRTGIPIAEDSTTYTVYAIID
                     TEYVSELKKVLYVQSSQFSKVAEIFKKHLGMETAYVMEQLNQPELKQVYFGTLGKNIS
                     YSTMSSIQEEMKAAGIEGIAFNASPGRMYPNGNFASIFVGLANPVENKDGSHSLQGVS
                     GLEYYLNDILAGQDGKVIYEKDSQGRVLPGTEKVETETVNGQDVYTTISADLQRSLET
                     NMNTFFDNAKGRYANATLVSAKTGEILATTQRPSYDSDTKEGLGQEGLLERSLLYQEA
                     FEPGSTMKVLTVASAIDNGTFDPNAYYTNNEYVIADAKINDWTLNAGYSAVTLNYAQG
                     FSLSSNVGMTLLQQQMGDEKWLNYLTKFRFGYPTRFGMGDEAPGMVPEDNIVSIAMSS
                     FGQGISANQAQMLRSFTSIANNGIMLEPKFISALYDPNTDTARVSSKEEVGNPVSEQA
                     ADDTLRYMINVGTDPVYGTLYSHDLQGPAIQVDGYDIAVKSGTAEIASEDGQGYIKGA
                     YINSVVAMIPAEDPEFIMYVTIRQPEVLNVLSWRDIVSPTLKEAMLLKDNLNLDSPAP
                     ALAQVANETEYQLPDLIGKAPGESAEELRRQLVQPVILGNGAEIKKVSVEKGSNVIAN
                     QQVLLLTNKFEEMPDLYAITKENMDIFAEWTGIEVTYKGTGSKVVDQSVEVGTALNKT
                     KKITITLGD"
     gene            complement(10205..10528)
                     /gene="ftsL"
                     /locus_tag="AC1PJC_000735"
     CDS             complement(10205..10528)
                     /gene="ftsL"
                     /locus_tag="AC1PJC_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HIP6619756.1"
                     /translation="MLQEKRREATMRVIGDKIRTFTRVEKAFYSSIVLSGLALAIGII
                     FMQTRLLQLQSGMAKINQDISQKQIEINDAKQAVNELTRSARLMEIAEKAGLTFNNDN
                     IGVAE"
     gene            complement(10539..11489)
                     /gene="rsmH"
                     /locus_tag="AC1PJC_000736"
     CDS             complement(10539..11489)
                     /gene="rsmH"
                     /locus_tag="AC1PJC_000736"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016466808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HIP6619757.1"
                     /translation="MIKEFNHTTVLLHETVDMLDIKPNGIYVDATLGGAGHSEYLLSQ
                     LTDGGHLYAFDQDQTAIEHAHIRLASYIEKGQVTFIRDNFRNLKTRLAELGVTEIDGI
                     CYDLGVSSPQLDERERGFSYKQDAPLDMRMNRDGQLTAYDVVNNYDYHDLVRIFFKYG
                     EDKFSKQIARKIEQARAVKPIETTTELAELIKSAKPAKELKKKGHPAKQIFQAIRIEV
                     NDELGAADESIQQAIDLLALEGRISVITFHSLEDRLTKQLFKEASTIDVPKGLPFIPD
                     DLKAPLELVNRKPILPSQEELEANNRAHSAKLRVAKKVHK"
     gene            12071..12259
                     /locus_tag="AC1PJC_000737"
     CDS             12071..12259
                     /locus_tag="AC1PJC_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HIP6619758.1"
                     /translation="MNRVKDYRLLLGISQLDLAKAIGVSRQTINMIENNKYNPSLDLC
                     INLAKALQTDLNSLFWNE"
     gene            12273..12473
                     /locus_tag="AC1PJC_000738"
     CDS             12273..12473
                     /locus_tag="AC1PJC_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619759.1"
                     /translation="MKKNIRQALISTLIFIPLFVLFQLWGNSGAEILHTISQAKFWLQ
                     LLIAGTIYFLGFVYILPLFDQK"
     gene            12484..13566
                     /locus_tag="AC1PJC_000739"
     CDS             12484..13566
                     /locus_tag="AC1PJC_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3278 domain-containing protein"
                     /protein_id="HIP6619760.1"
                     /translation="MKKETFQDKLIKRFYGIAGPLDEFRQKEAFRLGNTCFILLFWGT
                     MALTLLALALSKRYPEVVAYGYPVTLLLAYLSASTYIMFKLRHSQLDSLDVEELTTKE
                     QKKFKGASIKFALYFTCGMYIWNTGFDAWMEGLNPLDHLFDLRKFLAACLVGVFMGIY
                     IEITLRKRMKKAEKLTVSSAIAKEEPKWIKNMIKRFYGIRGPLDEYRRAEADAIGGQA
                     FIYYFYFLALGNAIAYFLAYRYPLEVAAYYPMIIAFFSIILIGIVNMRTLHADLPQYD
                     VDELSPEERQARPLNPLLWGLGVALLSSLFAGLADLFSLQLPLLDSIFHVKSLFFGGM
                     MGLFASLALSAIAYLQKLEADTAKKK"
     gene            13579..13926
                     /locus_tag="AC1PJC_000740"
     CDS             13579..13926
                     /locus_tag="AC1PJC_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIP6619761.1"
                     /translation="MNKPFTPKQTCRIFVLFYGLFSAFFIYSYMVNEPISSDSFLITL
                     PTIQIFRSYKTTEEKRYFLIQSVFALFAMTLTYSVGIWLGHVKPLALILPAGFALAIL
                     YRIYLKKEKPDRR"
     gene            14314..14742
                     /locus_tag="AC1PJC_000741"
     CDS             14314..14742
                     /locus_tag="AC1PJC_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NusG domain II-containing protein"
                     /protein_id="HIP6619762.1"
                     /translation="MTFKSILKQLKLFDYILIGFTLVLSFLPAIFTYTHLTTDTNEAK
                     TIAYVRINGEVVDQFELSKDTPHQEKTYYPNEGQYNIIEVDGERIRVKEDNSPDQIAV
                     MTSWISQPGELSVCLPHNLLIEIKSVGGESTDEEELILPL"
     gene            complement(15321..16277)
                     /gene="menA"
                     /locus_tag="AC1PJC_000742"
     CDS             complement(15321..16277)
                     /gene="menA"
                     /locus_tag="AC1PJC_000742"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004659 - prenyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HIP6619763.1"
                     /translation="MNKSTKGLSLPVFLEFVEMKTKVASVFPMTLGILWSLYRYQAFN
                     WLNTLLFIIAVLSFDMCTTAINNSMDYHKAKDETYRQESNVIGKFSLDFRQMIGIVLA
                     LLVFSLLVSLLLVWQTSWLLLPMGALCFLIGIFYTFGPIPLSRMPLGEVFSGVTMGFG
                     IFFLAVFIQQPDLLLTSQVSGQWMTLQFSWIKIIEIIFMSIPLVTLIANIMLANNTCD
                     LEEDIRNHRYTLVYYIGKKNALKLYFVLASLPWLLWIIYCLIGFLPIWALAGLIGVWP
                     AYKSLETFLKKQVKRETFIEAVKSFVLFALLYVVILALALIF"
     gene            complement(16270..17319)
                     /locus_tag="AC1PJC_000743"
     CDS             complement(16270..17319)
                     /locus_tag="AC1PJC_000743"
                     /EC_number="2.7.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HIP6619764.1"
                     /translation="MKKIASLLFVGLLMVLLVACGGKQNEGLSVVKTPLTRSESLLHT
                     VVQLSIYHENQEEAMDEAVSYIKEMESLLSTNLEGADVYRINQAAGKEAVKVDERTFE
                     VIETAIDMSKESQGLFDISIGAVSNLWKIGDEDARKPSDEEIKVALPFINYKDITLDK
                     EKKTVFIKEGMTLELGAISKGYIADKVRELFASKGITTAIINLGGNVVVMGDSPTTQN
                     GWNVGVQDPDQVRGATVGSVPGTHDSVVTSGIYERYLEVDGVKYHHILDPKTGYPVEN
                     DISGVTVFSKTSIQGDALSTTLFLLGVEKGLDFINQIDGVEAVFIDKEQGVHLSDGLK
                     ESFELTNEEYHLVNE"
     gene            complement(17397..17876)
                     /locus_tag="AC1PJC_000744"
     CDS             complement(17397..17876)
                     /locus_tag="AC1PJC_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein"
                     /protein_id="HIP6619765.1"
                     /translation="MKTTKVVLKSLVVLGAVFALAACGSKQESTSTSSSTTETVVLKD
                     GTYKAESGKDDYGYKIVHTLTVKDGKISESKFDYEAEDGSLKSANEEYNKNMKDKAGV
                     SAGEAIEQLNAALVEKQDLSAVEVVSGATHTSEDFKKSTEALLAAAAEGKTETVKLD"
     gene            complement(17955..18944)
                     /locus_tag="AC1PJC_000745"
     CDS             complement(17955..18944)
                     /locus_tag="AC1PJC_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HIP6619766.1"
                     /translation="MVHQIWNTYPEIERGLEEVKSIILSEMMVLHPAVTAKIVEYVEA
                     PGKYLRAGLCLLFAQMTEGKISRSKLYFAAHLEVLHLATLIHDDVIDGADKRRGVTAA
                     HQQFSNRIAIYTGDYLLAYSSRLFGKGLRLLEVSRDDLDLGNDKLMETILRGELSQLL
                     NQFDANMTMKAYLKQIQGKTAFLFGLACQLGSFVPGQSRKDSSMAFRSGQALGMAFQL
                     RDDLIDYQLDVAASGKPRLQDIQNGIYTAPLLFAMREDKSIQQQLRAYIQSPTAEGLE
                     SLTDRIFATHAIAKTEKLIVSYLEKMMNFVDRIPQLSTASMQNLVAIVFSHYF"
     gene            complement(18963..20855)
                     /locus_tag="AC1PJC_000746"
     CDS             complement(18963..20855)
                     /locus_tag="AC1PJC_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HIP6619767.1"
                     /translation="MTKNIVIVGAGYAGIAAARLLGKNFKKDQDVTVTLIDKNSFHTY
                     MTELHEVAAGRVEANAIKYDLQRIFKKYPKVQLVTDKVVEIDYDKKQVVAEHQTLNFD
                     YLLLAMGGEANDFGVKGVKEHGFTLWSIEAAERLHDHMIDACYRAMREHDEAKRRALL
                     TFTVIGAGFTGIEMIGELIDWVPILAREFKLDPKEFSLKVVEATPNILAMVTEKEQVK
                     ARKYLEKKGVELVLGDGVASVQEDSLTLSSGRQIPTYTSIWTAGVQANTDASEFGIEK
                     ARAGRLVANEFMEAKGKENIYVAGDLVYFEESEGKPTPQIVQAAEQTGHTAASNIIAA
                     IKGGEKHSYKGKYDGFMVSIGARYGVAFLMDKYHMSGFMAMAVKHMVNLLYFFTIRSF
                     FYMGSYVRHEFFDIQNKRNIFGGHTSGKGNLLWSVPMRVLYGSVWLYEGIKKAFGLFG
                     TTSWFGDQVVFPFPWLADPVSGASAAEAVSSASQAATAAAEAAEPIFGLSYAYGEAPM
                     AVLDKMPDWFATIMEFMMPNQEVALFMQKFMTVAEIGIGLALIAGAFVWIVSAATVAL
                     VVMFSLSGMFYWVNIWFIPAAISLMNGAGRAFGLDYWIMPWLGRFLDKKIYGKPKHIY
                     RIKDKK"
     gene            21038..21577
                     /locus_tag="AC1PJC_000747"
     CDS             21038..21577
                     /locus_tag="AC1PJC_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gx transporter family protein"
                     /protein_id="HIP6619768.1"
                     /translation="MNSKRQTLNFITMLAAQAVVISLIERLITPPFAFAPGAKLGLGN
                     LISLIAIFTLPTKDSLKVVALRLLISTFLGGTFSTFLYGFAGTTLSYVGMLSAKQLGP
                     NRVSPIGISILGGMLHNLGQLLVFATIARSFYVLNYLPILAFTGILSGLLVGLAATYL
                     LQKVGPLRHYHQQVLAEWK"
     gene            21840..23189
                     /locus_tag="AC1PJC_000748"
     CDS             21840..23189
                     /locus_tag="AC1PJC_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HIP6619769.1"
                     /translation="MSPFRIKLSPSQRIIISFLFVILTGSILLSLPISQISTSTASYW
                     DHLFTSVSMVCVTGLFTKAVAETYSTFGQIICMMLIQIGGLSLIGFIGLFALRGGRKM
                     NFINMATLQEALNRSDTKYFRNFLKSAFGFTLAVEAFGALLLSFHFVPEFGWARGLFT
                     SIFVAISAFCNAGFDNFGATSIMRYVDNPLINITLASLIIMGGLGFSVWFDLQTQIGQ
                     KRSLRKLGFHTKIVLGLTAIILTLGTLTTLLTEWNNPSTIGQLSFGHKLLASFFQTVT
                     MRTAGFASIDYTKAEPITLLLYIFQMMLGGAPGGTAGGIKITAFLTLVLYARSEILGL
                     PHTNFMGRTIDNLSIRKAFATFSVFLLMFIIGLFALALTDDRQPLLFLMFEVMSALAT
                     VGVTANLTPSLTMAGQAVIMALMFFGRIGPLSILASLSVRKLSKTESLQYAKSSMLV"
     gene            23201..23866
                     /locus_tag="AC1PJC_000749"
     CDS             23201..23866
                     /locus_tag="AC1PJC_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium channel family protein"
                     /protein_id="HIP6619770.1"
                     /translation="MPNYTIGILGLGVFGTTIAKTLHNYDCNIIAIDNHEQRINHLEP
                     ILTRGIVGDITDRSLLRAAGIGNCDAVVVATGENLESSVLAVMHSKVLGVPMVIAKVK
                     GTTAKEVLLRVGADKVISPERETGISLAKQLLHRDTTSLFELEGNVSIVEFHPPVKWI
                     GKTLGELKLRQHYKLNIIGYRSGENQELNIQLTPDYVFKSDELILAVTDHNTVDHFEE
                     LTN"
     gene            24187..25524
                     /locus_tag="AC1PJC_000750"
     CDS             24187..25524
                     /locus_tag="AC1PJC_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HIP6619771.1"
                     /translation="MNDLTKGKPIAVILQFAIPLLIGSFFQLAYNFADSMIVGHTLGK
                     DAFASVGSTASLIFLIIGFAQGVTNGLTIISAQRFGAGDLEGLKKSFVHGLFYASLIS
                     LLLTVSALAFLKPILVLMQTPVSIIDHSHAFLTAMFGGLTFTIFYNFLSSALRSLGNS
                     KTPLLALVIACFINIGLDFFFILVMNWGVFGAGFATILAQACSVLFLIFYIIHKVPHY
                     HIGLVDLKLDRGNLKKHAQLAFPMGFQASIIAIGAMTLQFMVNQLGTDAIAAQAIALR
                     TDQLAMLPMVNLGLAIATFTAQNYGAKLYDRIREGVRHSLLLSIAWAIVFAVILILGN
                     RFFSGLFLPNASQTVLDLALVYYIINGSCYWIVASLFILRSFIQGLGKGFIPTLAGFG
                     ELIFRAAVAIIGMQYFGFYGTAAANPAAWIGSIIVLIPSSIIFMKKLKAGQSI"
     gene            complement(25543..25914)
                     /locus_tag="AC1PJC_000751"
     CDS             complement(25543..25914)
                     /locus_tag="AC1PJC_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619772.1"
                     /translation="MKKLMYALLVLAYVTVAYLSVYVLPHYYSGAIIGAAGASLGASF
                     KQFKEVQACPDQPLLAYFKWDKKKTSSLLLFLLGIILFVSLVLEFNWQYGIAFVVAIS
                     YAMLWNLLHIQFLRKYYFKNA"
     gene            complement(26050..26307)
                     /locus_tag="AC1PJC_000752"
     CDS             complement(26050..26307)
                     /locus_tag="AC1PJC_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002901318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF896 family protein"
                     /protein_id="HIP6619773.1"
                     /translation="MEQAKIDRINELARKKKAEGLTEEELQEQAALREEYIEGYRRSV
                     RTHIEGIKVVDEDGNDVTPEKLRQVQREKGLHGRSLDDPNS"
     gene            complement(26317..28350)
                     /gene="glyS"
                     /locus_tag="AC1PJC_000753"
     CDS             complement(26317..28350)
                     /gene="glyS"
                     /locus_tag="AC1PJC_000753"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017768433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HIP6619774.1"
                     /translation="MKKLLIELGLEEIPAYIVTPAMHQLRDRMATFLTDNRLAFDSID
                     VFSTPRRLAVRVRGLADQQTDLTEDFKGPAKKIALDADGNFTKAAEGFVRGKGLTTAD
                     IEFREIKGEEYVYVTKHEAGQPAKTVLAGIPEVLKAMTFPVSMNWASNKFAYIRPVHT
                     LTVLLDDEALDMDFLDVSSARISRGHRFLGNETEIASADSYEADLRAQFVITDPAERQ
                     HMIIEQIKAIEDKHNVTVEIDEDLLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSM
                     KNHQRYFVVRDKAGKLLPNFISVRNGNDQYLDNVIKGNEKVLVARLEDGEFFWREDQK
                     LKIADLVERLKVVTFHEKIGSLYEHMERTKVIAEKLADLAGLSADEKADVARAADIYK
                     FDLLTGMVGEFDELQGIMGEKYALLAGEKPAVAAAIREHYLPNSAEGELPESKVGAVL
                     ALADKFDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWEIPLDQLIAELYSL
                     NFASLTYDNQPAVMDFIRARVEKMMDKAIPKDIREAVLASSTFVVRLQLAASSAIFQK
                     SKEADYKEAVENLSRVFNLAEKAEATAIDEALFENEQEKALAAAVSSLELMEDMAGNL
                     DKLFALSPVIAAFFDNTMVMADDAAVKANRLALLKALADKASVVAVFNLLNSK"
     gene            complement(28362..28742)
                     /locus_tag="AC1PJC_000754"
     CDS             complement(28362..28742)
                     /locus_tag="AC1PJC_000754"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619775.1"
                     /translation="MSLKYEKPDILISLSLKVDEEIKIDYSVKPEEYHNKRMKRAILS
                     HLLSGLLPEDKFNNILLSVVTSSDDMKLVILSISFNSSLVEFLDSSERLLNSFRDSEG
                     KIVPLWSAEKHITSKCVGVKITES"
     gene            complement(28742..>29618)
                     /gene="glyQ"
                     /locus_tag="AC1PJC_000755"
     CDS             complement(28742..>29618)
                     /gene="glyQ"
                     /locus_tag="AC1PJC_000755"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018163989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HIP6619776.1"
                     /translation="QQFWNEQGCLLMQAYDTEKGAGTMSPYTFLRAIGPEPWNAAYVE
                     PSRRPADGRYGENPNRLYQHHQFQVVMKPSPSNIQELYLESLERLGINPLEHDIRFVE
                     DNWENPSTGSAGLGWEVWLDGMEITQFTYFQQVGGLATGPVTAEVTYGLERLASYIQE
                     VDSVYDIEWADGVKYGEIFIQPEYEHSKYSFEVSDQDMLLENFTKFEKEAERALEEGL
                     VHPAFDYVLKCSHTFNLLDARGAVSVTERAGYIARIRNLARVVAKTFVAERKKLGFPL
                     LDEATRAELLAEEVE"
BASE COUNT         8370 a         6969 c         5555 g         8724 t
ORIGIN      
        1 ccaacataaa acagccttaa tacaaaagaa tactgtggta ctttttttat ataataatct
       61 aaaataaagg caaaagaaat tagacaaagc aaaaaataaa tagtcaaaag aatattagga
      121 aatttataaa aactactttc aaataaagct aagtagagaa caaaaaatat tcctcccaat
      181 ataaacgaaa cagagtcaaa actaataatt ttatgttttt tcattggctt aattcccttt
      241 ccacaaatac aatatacgtt caaattttaa aaaggtcaag caaaaagtaa ccatcaacca
      301 agttcatcga aagctgacat tgatgtctgc taccttctta atgtcataca taccagctaa
      361 tcgctgacat gtgagaagtt actaacgtac gtttggaacg gagatataaa gggtatcttg
      421 aagatatttg atagacggtg tcgcaagcgg ctcttagtga ctattttttc tgctcctcgg
      481 tacacatgat ctactcgcag cttttcttta gtttgggaag aaaagctacc ccctcacttt
      541 atcactatcc aaaagaaatt cttgaaaaca agccaatacc tactctaaat caatcgcgca
      601 tggcatatcc gacaccacga actgttttta tatatgaatc ttgatgtggc aaatccagtt
      661 taccacgtag atagcgaata tatacatcga cgacattggt ctcagaagcc gcttcatatt
      721 tccaaacacg ctcaagaagt tgttctcgac taacaggctc tgggctattc attaaggtcg
      781 ccaacagatc atactctcgg cgggtcaaat taatcaattc atcacctcga gtcactgttc
      841 gattttgaaa atcaaccttc aaatcacgat aggccgcatg catgtgaacc tgcttacagt
      901 tattgtcaat aaaatcacga ccacgaaaaa tcgcagagat ttgctccact aaatcactga
      961 tgacaaaggg cttcactacg taggaaacag cataagagag gacttcttcc ccatattgac
     1021 taacttctgt cggctcaact accacaatca tgaccgtggc tggttttatc gctaatagtt
     1081 ctgcagccaa ttccttgctg gacatgtctg aaagctgaaa actcatcaga atcaagtcaa
     1141 aatccgtttc atgtgccaag gacatagcct ctttccctgt cgatgcataa tcaacaagat
     1201 agtctttttt ctgcaattcc atggaaacaa aatgcgagag attgcgttct ttaccagcaa
     1261 tcaaaatttt cttagccatt atccatcctt ttctattctt tcaaatggtg taggaatcgt
     1321 attatgacta gaaagaaggg cgcttccacg cccatctttt ctattttgat tcgctatacc
     1381 agtcgtaatg gaagattcct tctttatctt tacggttata agtgtgagca ccaaagtagt
     1441 cacgttgtgc ttgaatcaag ttcgctggca agttttcagc acggtagcta tcgaagtagg
     1501 taatagctgc tgagaatgtt ggtacaggaa ctcctgcttg aactgccaag gcaacaacat
     1561 cacgaactgc ctgttgatac ttagctgtta catcaaggaa gtactcatcc aagagcaagt
     1621 ttgccaagtc ttcatcacgt ccgtaggcat ccgtaatctt ttgcaagaag cgagcgcgga
     1681 tgatacaacc tgcacgccag atttttgcga tttcaccaaa tggcaagttc cagttgtttt
     1741 cttttgatgc tacgcgcaac tgtgcaaaac cttgtgcata agacatgatt tttgagaagt
     1801 acaatgcttg acggattttt tctaccaatt cagccttgtc gccttcgtat gcaaacggag
     1861 ctggttttgg aaggaccttg cttgctgcca cacgctcatc tttgtaagtt gagatataac
     1921 gagcaaatac agattctgta atcaatgaca atggcacacc caagtcaagt gatgattgac
     1981 ttgtccattt accagttccc ttgttaccag ccgcatccaa aatgtagtca acgattggtc
     2041 cagcttggcc ttgatcgtct ttacgtttca aaatatctgc tgtgatttca atcaagtagc
     2101 tatccaattc gcctttgttc cactcagtaa agatgtcagc catttcatcc actgacaaac
     2161 cgagtaagtg ttgcatgagg tcataagact ccgcaatcaa ttgcatgtcg ccatactcga
     2221 taccgttgtg taccattttt acgtagtgac cagctccatc tggaccgata taagtcacac
     2281 atggtgctcc atcttctggt gcttttgctg aaatttcttc caagacatct gccaccaatt
     2341 cgtaagcttc tttttgacca ccaggcatga tagatggacc ttcaagggct cctttttcac
     2401 caccagatac acctgtaccg atgaagttaa tacctgagtt tgccaattct tttgaacgac
     2461 ggatagtgtc ttcgtagaaa gtattaccac catcgatcaa gatgtcacct tcatccaagt
     2521 gtggcaaaag cgcttgaatg gttgcatctg taccaggacc agcttgaacc ataagcataa
     2581 tgcgacgtgg tttttcgata gatgccacaa agctttccac atcgtaactt ggtaccaagt
     2641 ttttacctgg gttgcttgca acaacatctt ctgttttatc agcagagcgg ttgtaaatgg
     2701 ctactgaata gccacgtgat tcaacgttaa gcgcaaggtt gcggcccata acggccatcc
     2761 ctacaacacc aaaatttgct ttagtcattt gtttactcct ctaatttgta tctcttttat
     2821 tatacaccga aagcttaaaa ttgacaagaa ttttcagata atttaactat cttgccaatc
     2881 tgagttagtc ctcatctcca aataaccctt gtaattgggc aaaaggacta ttggcctctt
     2941 ttttctcttg agctttttgt tgaaaatctt cttcagtcat taaagcccaa gcttgaccag
     3001 atggtagttc ctgtccagct tcttcttcag gtgtcaagac tttgattggt atagccagta
     3061 aaatattatc tgctacactc tcatcaagga caatgtggtc atcttctact accagtacca
     3121 tatcctcatc aatcaaatct tgttctttaa gaactgcttc attggcaaca aaaagttcat
     3181 tgacgttttg gacctcatgc aaaacaactg gttgcagaga acgactggat gccaaggtaa
     3241 tatcataagt catctgatag tccaagaaaa agaaacctga ttcaaaacgg atatttccag
     3301 tgacttggac tggcgacaag cctagaactt caccatttcg agcttgcaat tcttcctgta
     3361 aatccaaggt tttatcaaag gagatgccat ctggattttt ctgaatatcg taaatatgaa
     3421 acattgtatt cccctattca gctagttctg tgatgtagtt atagacttcc tgaccagcaa
     3481 ctgccccatt tccaacagcg gtcgcaatct gacgcagttg gttttggcga atgtcaccga
     3541 tggcgtaaat cccagatttg ctagttgcca tcttttcatt agtgataacc caaccagctt
     3601 cgtctgtaat tcctaggtcc gcaactgtat cagtcatcgg atccagaccg acatagataa
     3661 agacacctcc gaaatcaagt tcactgactt cttcagtttt cacatttttg ataaccacgc
     3721 tttgtacacg taagtcatcc cccttgattt cttcgactac gctatcccag ataaagttta
     3781 ttttttcatt ggcaaaggcg cgatcttgga tgactttttg agcacgaagc tgatcacggc
     3841 ggtgaacaat tgtcacagac tccgcaaatt gtgttaagaa gagagcttct tcgaccgcag
     3901 aatctccacc accgacaacc aagagttttt gtccacggaa gaaggcaccg tcacagactg
     3961 cacaatatga gacaccgcgg ctattgtaag tatcctcacc tggaatacct aacaaacggt
     4021 gttttgcccc catggctaga acgactgtct ttgtctccaa aacaccatcc tcagtaatca
     4081 ctttcttaat ttgtccttct tcctcaatac ggactaggtt gccaaaaata tggtccacac
     4141 cgaatttttc caagggttca aacatttttt cagccaaggc tggacctgaa atatggtcat
     4201 agcctggata gttttcaatt tccgcggtat tgttcatctg accaccataa ataccacgtt
     4261 ccaaaagagc tacctttaaa ttgctacgcc ctgcataaag agctgcagtc atccccgcag
     4321 gacccgcacc aattacaact gtatcgtaca tatacttttt ccttctacgc tttaaacatt
     4381 aataagattc ccactactcc aaaggctgca atggggattg tcatcacatt aatcatcaac
     4441 aaatcaaaca agaaatcttg tcgttcttgc aaggttttat ccacaccctt tgtcgcacgc
     4501 cagataaacc agaccagact agaagtgata atcaacaagg aagctattag caatccttgt
     4561 aaataaaaac ttagaatgtt ttgtaacatc tttttcctcg attactttaa aagctttgac
     4621 gcttggcttt acgttctgca cgaccctttg cacgcgcttc aactcgcttg gtcttgcgac
     4681 gtttttcatc aacagcccat tgaattttct tcttgtagcc tggtttgact tttttctttt
     4741 tcttcttgac caagccaatc atttccaaat ctagtttttc acgagatttt tcacggttag
     4801 cacggcggtc acggtcgtag gtatcgacaa attcgccatt tttcatttct tttggcaaga
     4861 atttgatatt gagtttttct agctctcgaa tatctgcatc atcgcttggc tgataaaggg
     4921 taatggcaat acctgataaa ccattacgac ctgtgcgccc cacacggtgg acaaagaagg
     4981 aaaggtcttg aggaattgca tcattgatga catgactgac gccctcaata tcaatcccac
     5041 gtgctgctaa atccgttgca acaatgtact gatagtccaa gttcttcacc tggttcatca
     5101 tccgcttgcg ctcacgtgga ggaatatccc catgaatctt tgcgacacga agaccgttcg
     5161 cagtcaaata gctatgcaat tcatctgcac gtgtctttgt attgacaaaa atcatggcca
     5221 agtaaggttg catgagcttg gttacttcca agatttgagc attacggtca cgccccttgg
     5281 ttgaaatcag ccagttttca atggtatctg aaatgaccgt atgggtcttg atttgttcca
     5341 tgactggatt ggacaagtat tttttcaaaa acggttggag tttctgcgga atggtcgctg
     5401 aaaagaccat aaattgcaag tcttttggca ggctgccagc aattttatca actgtttcca
     5461 aaaagcccat gtccaaggtc atatctgcct catcaaccac aaaggtgttg gctttatgga
     5521 tagcaaggtc acctgatttg accaaatcat agatacgccc tggtgtccca acaacaatgt
     5581 gaggctgact agcttgaagc ttgtcaattt gacggttctt atccgtaccg ccaacataat
     5641 tggtcacacg aacttcgatg tccgaatgac tagccaactg gcgtgccgct tgataaatct
     5701 gagtagctaa ttcacgagat ggggctgtaa taacagcctg aacttggtcc aattcctcat
     5761 ttaatttttg gaaaataggg atcaagaagg tatgggtctt acccgaacct gtttttgatt
     5821 cccctatcaa gtctcgccct gacaaaacaa caggaatcaa tttctcctga acttctgtcg
     5881 gctggacaaa gttaatttct ttcaaagcct cctgaatata aggcttgagt ttcatatctg
     5941 taaatttcat agtttcctct ttagttgtat ttccctctat tatagcacga tttaggtgga
     6001 caagcaaaaa ggacggatac ccgtcctaat caactctcgc ttgcttcagt aaattctgcc
     6061 tcaataattc caagttcctt ctcttcttcc aaacttgctt taaaggcctc agtgagctct
     6121 aattcgccat caaaatcacc atttattttt ttcacaaatg tgtctgccaa catccctccc
     6181 atgggctgga aggtaaaata ggtcaaacct cctgaaatca gaccacccaa aataggaact
     6241 gcattggcaa tggtcttttc aacagtcttt ttggtaattt tcacaccaat cactgcggct
     6301 acctttttca ccaagggata ccaggttgtc ttggtcaaag cctgcatagc tactttttta
     6361 ccgatattag ctccgactat cttggatact ttattgagaa gaactgctga accacctgct
     6421 ccaaacatga caccaatgta ggcaataatg cggatttgaa cctcttctga aatttccttc
     6481 ccttcaccaa caaataattc atcttcacca aaaagataag cgatttgttg cgacaaattc
     6541 aaggcaaaac caaaatactg agctatatca gcagtacctg ccgccaccgc tgtaaatgga
     6601 ttccccggta aaccagctgc gaaagaaatc aaagatgttt tcgtagtcat atcattaatg
     6661 attttttcag cttccttacg caaagctttt gtagtgaaga ccgctgttgg tccatccgca
     6721 ataattttat ctagataggg actatcttta aaacgagtct tcaaaaattc ttcccgattg
     6781 actttaacca taggaagttg actagcagct gtcatggttt gaataaccac tccatataac
     6841 tgttcttgat tgaattgttc catttttatc ctccaccaat tctctctata ttttaccccc
     6901 cccccgacca tatttgtcaa ggtaaaaaaa cagcatttct gctgtttctg acattttata
     6961 gataaagaat agctagggta atcaagctca tgatgagacc gactgaccag aggaaaaaat
     7021 caactttcca ctcgctccat ttttcagctt ttccggtcaa acctccgagc tctaaatggt
     7081 gatgaaaagg agtcattcgg aagatacgac gaccttctcc aaagcgtttt ttggtgtatt
     7141 taaaatatga aacctgcaac ataacagagg acgtttcaat gacatagacc aagccgataa
     7201 ggaggagggt ccattcctga cggagggcaa ttgaaatagt tgccaacata ccgccgagag
     7261 ccaagcttcc cacatcaccc atgaaaatct tcgctggttt acggttataa acaaagaaac
     7321 cgagcaagcc accaatcatg gtcacacaaa ctagaagaat atcgaatttt tgctcattga
     7381 aggcgatgac agagtaagct agaaggctga taacaactga gatagaagcc aatccatcaa
     7441 taccatctgt caaattaact gcatttgaaa aaccgaccag ccagaacaga acaaatggga
     7501 aataaagaac tcccaaatgt accatgtgac caaatacatt caattctccg ccacctgctc
     7561 ctcttacgtg gacaaagtag aagacaatcc ctcctaaaat ttgtagagca agcttttgtt
     7621 taggattaag accttcattt attttacgga aaatttttaa aaagtcatcc aaaaatccta
     7681 ctacaccata aagggcaagg atgaagagga tggcaaggac accacccgtc aatagttgaa
     7741 aggccgttgc aaacaacaag ctgacaagaa tcgcaacaac gagaaaaact gttcccccca
     7801 ttgttggtgt acctgcctta aactgatgtt gtttcacatc ttcgtgcatc tgttgcccct
     7861 cgatgcgttt ggcttgataa aatgtaataa atcgtgggat taagagaacg gttgctagaa
     7921 aagctaccaa tcccgacata agtgcgaatt gcatgttagt ctcctaaggt tattgttatt
     7981 ttcttggttt tattcaaagc ggtaccgacc tctacacttt ggtcgactac ttttgaaccc
     8041 gttcctttat aggtcacttc gataccagtc cattcagcaa atatatccat attctctttg
     8101 gtgattgcgt acaggtctgg catttcttcg aatttatttg tcaggagtag aacctgttgg
     8161 ttggcgatta cgttacttcc tttttcgact gaaacttttt taatttcagc accgtttcca
     8221 aggataactg gttgaactaa ttgacggcga agttcctcag ccgactcgcc tggtgcctta
     8281 ccgatgaggt ctggcaattg atactctgtc tcattagcga cctgtgccaa tgctggtgca
     8341 ggtgaatcca gattcaaatt gtctttcaac agcatcgctt ctttcaatgt aggactgaca
     8401 atgtcacgcc aagacaggac atttaatact tccggttggc gaatggtcac atacatgata
     8461 aattcagggt cctcagcagg gatcatggct actacagagt tgatgtaggc tcctttaata
     8521 tacccttgac catcttcgct ggcaatttcc gccgtacctg atttgactgc aatatcatag
     8581 ccatcaactt gaattgcagg cccctgtaaa tcatgtgagt agagcgtacc ataaacaggg
     8641 tcagtaccga cattaatcat atagcgaagt gtatcatcgg cagcttgttc agaaactgga
     8701 tttcccactt cttctttcga agaaactcta gctgtatctg tattaggatc ataaagagct
     8761 gagataaatt taggctctag cataatacca ttgttcgcaa tggatgtaaa actacgaagc
     8821 atctgtgctt ggtttgcaga aatcccctga ccaaacgatg acatggcgat agaaacaatg
     8881 ttatcctctg gtaccattcc tggcgcctcg tcccccatac caaaacgtgt tgggtagcca
     8941 aaacggaact tagtgaggta atttagccat ttttcatctc ccatttgttg ttgcaataag
     9001 gtcatcccaa cgttactgga tagggagaaa ccttgcgcat aattgagagt cacggctgaa
     9061 taacctgcat tgagggtcca gtcattgatt ttcgcatctg caataacgta ctcattattg
     9121 gtataatatg catttgggtc aaaggttccg ttatcgatag ctgacgctac tgttagcacc
     9181 ttcattgttg aaccaggctc aaaggcctct tgatataaga gcgaccgctc tagcagtcct
     9241 tcttgtccca gaccttcttt ggtatctgaa tcatagcttg gtctttgggt cgtcgccagt
     9301 atttcacccg tcttggctga aaccaaagtt gcattcgcat atcgcccttt ggcgttatca
     9361 aagaaggtat tcatattggt ttcaagagaa cgttgcagat cggctgaaat tgtcgtatag
     9421 acatcctgcc catttactgt ctccgtttca accttttctg tcccaggtag gacacggcct
     9481 tgactatctt tctcgtagat aacctttccg tcttgaccag ccagaatatc attcagataa
     9541 tattccaaac cactcacacc ctgtaaacta tgactaccat ccttgttttc aaccggatta
     9601 gctaacccga caaaaattga agcaaaattt ccattcggat acatccgtcc tggactagca
     9661 ttaaaggcaa tcccttcaat acctgccgcc ttcatctctt cttggattga agacatcgta
     9721 ctataggaga tattcttacc taaggtccca aagtatacct gcttcagttc aggttgattc
     9781 agctgctcca taacataagc cgtctccatt ccgagatgct ttttaaagat ttctgctact
     9841 ttgctgaact gagaagactg cacatacaaa acttttttca gttctgacac atattctgtg
     9901 tcaatgatgg catagactgt ataggtcgtt gaatcttctg caataggaat tcctgtacgg
     9961 tcgtatatgg tcccccgttt agcttgaacg gtaacttcac gctggtgtac cgcatcagct
    10021 ctttctgaca aatccacccc aaatttacta tcggttccga taatataggc aaagttgatt
    10081 aaaaagagaa aaaagacgaa aaccgtcaaa agaagtaggc tctgtcctac tcttcgacga
    10141 ttttttgacg gaacatatcg ttttttcaag acataccgca agagtttatt atttcttctg
    10201 ggcattattc ggctactcca atattgtcat tattaaaagt taatccagct ttttcagcaa
    10261 tttccatcaa tcgagcggaa cgtgtcaatt cattgacagc ttgctttgca tcgttgattt
    10321 caatctgttt ttggctaata tcttgattga ttttggccat cccagattga agctgcaaaa
    10381 gccgcgtttg cataaagata attcctatcg caagggctaa tccagataat acgatgcttg
    10441 aatagaaggc tttttctaca cgtgtgaaag ttctaatttt atcaccgata acccgcatag
    10501 tggcttctct acgtttttct tgcaacatag actctctcct atttatgtac tttcttagct
    10561 acacgcagtt tagctgaatg cgcgcgatta tttgcctcta attcttcttg actaggtaag
    10621 ataggcttac gattgaccaa ttcaagtggc gccttcaaat catctggaat aaacggcaaa
    10681 ccttttggaa catcaatcgt acttgcttct ttgaagagtt gtttggtcaa acgatcttct
    10741 aaagaatgga aagtaataac agaaatccgt ccctccagag ccaataagtc aatggcctgc
    10801 tggatagatt cgtctgctgc tcccaactca tcgttgacct caatccgaat agcttggaaa
    10861 atctgcttag caggatgccc cttcttctta agttccttgg ctggcttggc agatttgatc
    10921 agctctgcca actcagtcgt tgtttcaatc ggcttgaccg cacgcgcctg ttcaatctta
    10981 cgagcaatct gcttggaaaa tttgtcctca ccgtatttaa agaaaatccg taccaagtcg
    11041 tgatagtcat agttattgac cacatcatag gctgtcaact gaccatctcg attcatccgc
    11101 atatcaagcg gtgcatcttg tttgtaagaa aagccacgct cccgctcatc caactgcgga
    11161 ctagatactc ctaaatcata acaaatccca tcaatctctg ttacacctag ctccgccaag
    11221 cgagtcttga gattgcggaa attatccctg ataaaggtca cttgtccctt ttcaatgtag
    11281 gatgccaagc gaatatgggc atgctcaata gcagtctgat cctgatcaaa ggcataaaga
    11341 tgccccccat ccgtcaactg actgagcaga tactcactat gccctgctcc ccccagcgtt
    11401 gcatctacat aaattccatt tggtttgatg tctaacatat cgactgtctc atgcaagaga
    11461 acagttgtgt gattaaattc cttgatcata tcttttctat tgtaccacaa attaaaataa
    11521 aaagttgttg caaacttttt acaaaaaaac tgtcaaatat agttgacaac ttatatgaac
    11581 aggtatatac taacagtaat gaaacatgtc acatatagtt gacatcaaca gggaggtctc
    11641 cctcattttt ttacaaccaa ctgtcgcata taattgacat cgtgcctaga ggctgggtaa
    11701 aaagcccagc accgcttctc aaagttagtg tcaacatctc agcgcagtgg ttgattgggt
    11761 ttaacagtcc agtggactgt taaaggttgg agataagatt tgcgaagcaa atctcagcaa
    11821 ttcgtgtttt acactccaaa tctaacctct acgactgatg cgaactttgt tcgctctatc
    11881 tccaacctcc aaaggttcct cgaacctttg gagctgtgcg gaggtggagt aaaatagtcc
    11941 agtggactat tttagcccga acctaaatgt ttggaagtga ggggaactct tctatgaatg
    12001 gttgagttct tccccactcc tctctcttta caatagaatg tcgtatatat tttacatgaa
    12061 aggagaaccc atgaaccgtg tcaaagatta tcgcctactg ctagggattt cccagctgga
    12121 tcttgccaaa gccatcggcg tatccaggca aaccatcaac atgattgaaa acaacaagta
    12181 caacccctcg ctagaccttt gtatcaacct agccaaagct ttacagactg acctcaatag
    12241 tctcttttgg aatgaataga aaggaaaata tcatgaaaaa gaatatacgt caagctctta
    12301 tctctaccct tatttttatc ccgctctttg tcctctttca gctttggggc aatagcggag
    12361 cagaaatctt gcacaccatc agccaagcaa aattttggct acaattgctg attgctggga
    12421 ccatctactt cttaggcttt gtttacatct taccattgtt cgatcaaaaa taaggagctg
    12481 cttatgaaaa aagaaacctt tcaagataaa ttaatcaaac gattttacgg tatcgcaggg
    12541 cccttggatg aatttcgcca aaaagaagcc ttccgactag gcaatacctg ctttatcctg
    12601 ctcttttggg gcaccatggc tcttacccta ctggcactcg ctctatccaa acgctaccca
    12661 gaagtcgttg cctatggcta ccccgttact ctgctcctag cctacctatc tgctagtacc
    12721 tacatcatgt ttaaactccg gcacagtcaa ctggacagtt tagatgtaga agaactgact
    12781 accaaggaac aaaagaaatt caagggagca agtatcaaat tcgccctcta tttcacctgt
    12841 ggtatgtata tctggaacac gggatttgat gcctggatgg aaggactcaa tccactagac
    12901 catttatttg acctccgaaa attccttgca gcctgtctag tcggtgtttt catgggaatt
    12961 tatatcgaaa tcactcttcg taaacgcatg aaaaaggcag aaaaactaac tgtcagctct
    13021 gctattgcca aagaagaacc caagtggatc aaaaatatga ttaaacgttt ttatggtatc
    13081 cgcggtcctt tagacgaata ccgacgggcc gaggctgatg ctatcggcgg acaagccttt
    13141 atctactact tctacttcct agctcttgga aatgccatcg cctacttcct agcctaccgc
    13201 taccctctgg aggtggctgc ctactatcca atgatcattg ccttcttcag tattatccta
    13261 attggtatcg ttaatatgcg tactctccat gctgacctgc ctcaatatga cgtggacgaa
    13321 ctgagccctg aggaaagaca agcccggccc cttaacccac ttctctgggg actgggagtt
    13381 gccctgctat ctagcctctt tgctgggctg gcagacctct ttagcctcca gcttccccta
    13441 ctggattcca tcttccacgt aaaatccctc ttcttcggtg gcatgatggg cctctttgcc
    13501 agtctagccc tgtctgccat tgcctatctg caaaaactgg aagcagatac tgctaagaaa
    13561 aaataaggag ctaacaccat gaataaacct tttacaccta aacaaacctg tcgcattttt
    13621 gtcttgtttt atggcctctt ttctgccttc ttcatctact cttatatggt caatgagcca
    13681 attagcagcg attcgttctt gattacgcta ccgaccattc agatctttag atcctataaa
    13741 acaacagagg aaaaacgcta ctttctcatt caatctgtct ttgcactgtt tgccatgacc
    13801 ttgacttatt ctgtaggcat ttggctaggg catgtcaaac cacttgccct catccttcct
    13861 gctggatttg ctctggctat tctttatcgg atttatctta aaaaggagaa accagataga
    13921 cgttgacaaa ccgaaattca ttttcacttt gattgttctc tcctatacag caatttgtag
    13981 catatataca tagctacctg acaggggaca atccatcaat ccttttctta ctattcacta
    14041 tacttccaat tttaaatagt gactggcaaa ctacccgtcc agaatcaaat gttgtccaaa
    14101 aagctatcta tctttatcat aaaccgctgc tctggtttct ctttgcaggt tttgccctaa
    14161 ctttctccat tggatttttc gctgggaaaa tacaaccact tcatgctaga ttttggggaa
    14221 tgttagccat cctactcttc tctagataat tgaaaaagta atctgtatcc aacattttac
    14281 aaagtaggat tttttctata aaatagattg tatatgacat tcaaatccat tctcaaacaa
    14341 ctcaaactat ttgattatat cttaatcgga ttcaccctag ttttatcctt tcttccggca
    14401 atttttacct atacacatct gacaacagat acaaatgagg caaaaacaat tgcctatgtc
    14461 cgcatcaatg gtgaggtggt cgaccaattt gaattatcaa aggacacacc ccatcaagaa
    14521 aagacctact atcccaatga agggcaatac aatatcattg aagttgatgg cgaacgcatt
    14581 cgtgtcaagg aagacaatag cccagaccaa attgccgtta tgaccagctg gattagtcag
    14641 ccgggcgaat tatccgtctg cctgccacat aacctgttga ttgaaatcaa atccgttggc
    14701 ggggaaagca ctgacgaaga agaactcatt ttaccactat agtcttttag tttactttta
    14761 gtactagctc caaaggtttg ggaaatcttt ggaggttgga gataaagcga acaaagttcg
    14821 catcaaaagc cgcaggcata actcaatgct ttcttatttc taggcattga cttgaaacag
    14881 tcccccagac tgtttcaatc aggcaaggcg agttcaaata ctccagtgga gtgtttgaag
    14941 ttggaaattg aggctgggca aaaagcccaa cctcgcttct cagggttcgt gtcaacatct
    15001 cagcgcagtg gttgattggc agatttgttc gtgttttaca ctctaaatct gaccattacg
    15061 actgatgcga acagagttcg cttcatttcc aacctccaac agtcactact ctgactgttg
    15121 gagctgtgcg gggggtggga gtgaaacagt ctggagatag actgtttcag ctcaacaact
    15181 ggaaataagg acttgttgac gaactctttt tgaccagtcg agttctttcc cgctccccgc
    15241 tcgtcgaagt aataaaagaa aaactaaatg acgatataac aaagaagaca cagcctgatg
    15301 aacgactgtg tctttccttt ttagaaaata agggctagag caagtatcac cacatatagc
    15361 agcgcaaaga gtacaaaact ctttactgcc tcgataaagg tttcccgttt gacttgcttt
    15421 ttcaaaaatg tttctagact cttataggca ggccaaacac cgattaaacc ggccagtgcc
    15481 caaattggta agaatcctat cagacagtag attatccaca gcaaccatgg taaacttgcc
    15541 aagacaaaat acaatttaag agcatttttc ttgccaatat agtaaaccag agtataacga
    15601 tggttgcgaa tatcttcctc taaatcacag gtattgttgg ccaacatgat attagcaatc
    15661 aaggttacca gaggaatgga catgaaaata atttcaatta tttttatcca agagaattgc
    15721 aaggtcatcc actggccgct cacttggctg gtcagtagca aatctggttg ctgaataaat
    15781 acagcaagaa agaagatgcc aaatcccatg gttactccag aaaagacttc acccagtggc
    15841 attctcgaaa gtggaatagg tccaaaggta tagaagatac caatgaggaa acagagagct
    15901 cccatcggta ggaggagcca actggtctgc catacaagga gtaatgaaac cagtagagaa
    15961 aaaacaagta gggcaaggac gattccaatc atctgccgaa aatcaaggga gaattttcca
    16021 atcacattgc tttcctgacg ataggtttca tccttggcct tgtggtagtc catgctattg
    16081 ttgatggcag ttgtacacat gtcaaagcta agtactgcaa taatgaagag gagtgtattg
    16141 agccaattga aagcttgata gcgatacagg ctccataaaa tccccagggt catcggaaaa
    16201 acactagcta ccttggtctt catttcaaca aattctagaa atacaggcaa actgagccct
    16261 ttagttgatt tattcattga caagatgata ctcctcattc gttaattcaa aactttcttt
    16321 caagccatca ctcagatgaa caccctgctc cttatcgatg aaaacagctt ctacaccgtc
    16381 aatctgattg ataaagtcaa gacctttttc cacacctagt aagaagagag ttgtggataa
    16441 ggcatctcct tggatagatg ttttggaaaa gactgtcaca cctgagatat cattttccac
    16501 aggatagcca gttttgggat caagaatatg gtgatatttg acaccgtcca cctctaagta
    16561 gcgctcataa atacctgagg taacaaccga atcatgtgtc cctggcacag aaccaaccgt
    16621 tgcaccacgc acttggtctg ggtcttgaac tcccacattc caaccatttt gtgtcgttgg
    16681 cgaatccccc ataaccacta cattcccacc tagattgatg atagctgtcg taatcccttt
    16741 gcttgcaaac aattctctaa ccttatctgc aatgtaacct ttggaaatgg ctcctaattc
    16801 taaggtcatt ccttctttga taaagacagt cttcttctcc ttatctaaag taatgtcttt
    16861 ataattgata aatggcagag caactttgat ttcttcatca ctcggcttgc gtgcatcctc
    16921 atctccaatt ttccacagat tgctcacagc tccaatggaa atgtcaaata gcccctgact
    16981 ttctttactc atgtcaatag ctgtttcaat cacttcaaag gtacgttcat ccaccttgac
    17041 agcttctttt cctgctgcct gattgatacg gtagacatct gccccttcca agtttgtgga
    17101 caacagactt tccatctcct tgatatagga gacagcttca tccatcgctt cttcctgatt
    17161 ttcatgataa atactcaact gcactactgt gtgaagtaag ctttcactac gagtcaacgg
    17221 agttttcaca acagataaac cttcgttttg tttaccacca caggcaacaa gcaaaaccat
    17281 cagtaggccc acgaacaata gacttgcaat ttttttcact gattttacct tcccaaaaaa
    17341 ataagaagac acagtagcca aacaagtgcg actgtgtctt ttctgtatag acttaattag
    17401 tcaagtttta cagtttctgt ttttccttca gcagctgctg caagaagggc ttctgtactc
    17461 ttcttgaagt cttcagaagt atgagttgca cctgatacaa cttcaacagc tgagaggtct
    17521 tgtttctcaa ccaaagctgc attgagttgt tcaattgctt caccagcaga aactccagct
    17581 ttatctttca tgtttttgtt gtactcttca tttgctgatt taagacttcc atcttcagct
    17641 tcgtagtcaa attttgactc actgattttt ccatctttaa cagtcaatgt gtgaacaatt
    17701 ttgtagccat aatcgtcttt gcctgactca gctttgtaag taccatcttt caatactact
    17761 gtttctgtag ttgaagatga agttgaagta gattcttgtt tagaaccgca agcggcaagt
    17821 gcaaataccg caccaagaac taccaaactt ttcaacacaa ctttagttgt tttcataaca
    17881 atactccttt tgtaaagtaa atagttttat atttataatg atataccgaa taaactaaat
    17941 tgtctagtat ttttttaaaa ataatgacta aaaactattg ccaccaaatt ttgcatagat
    18001 gcagtcgata actgtggtat tctatctaca aaattcatca ttttttccaa atagctaaca
    18061 atcagtttct ctgttttggc aatagcatgt gttgcaaaaa tcctatctgt aaggctttcc
    18121 aacccttctg ccgtagggga ttgaatatag gcccgcaatt gctgctggat agacttgtct
    18181 tctcgcatag caaatagtag cggtgcagta tagataccat tttgaatatc ttgcaatcta
    18241 ggttttcctg atgctgctac atccagctga tagtcaatta agtcatctcg tagctgaaag
    18301 gccatgccaa gtgcttgccc agaccgaaaa gccatgctac tgtctttcct agattggcct
    18361 ggtacaaagc tccccaactg acaggcaagt ccaaatagaa aagctgtttt tccttgaatt
    18421 tgcttgagat aggctttcat agtcatattg gcatcaaatt gattgagtag ctgagataat
    18481 tcccctcgaa gaattgtttc catcagctta tcattgccca aatccaaatc atcacgtgat
    18541 acttctagca aacgaagccc ttttccaaat agtcgacttg aataggcaag aagataatca
    18601 cccgtgtaga tagcgattcg attagaaaat tgttgatgag ccgctgtgac tccccgccgt
    18661 ttatccgcgc catcaatcac atcgtcatga atcagagtcg ccagatgcag gacttctaaa
    18721 tgggcagcaa aatatagctt tgaacggcta atctttcctt ccgtcatttg tgcaaagagc
    18781 agacagaggc cggcacgcag gtatttccct ggtgcctcta catattcaac aatcttcgct
    18841 gtaactgctg gatgcaggac catcatctca gataagatga tggattttac ctcttcaagt
    18901 cccctctcaa tctcaggata ggtattccaa atttgatgta ccactaactt tctatatttc
    18961 ctttattttt tatccttgat acggtaaata tgcttcggct ttccataaat cttcttgtct
    19021 aggaaacgac ccaaccatgg catgatccag tagtctagac cgaaggctct acccgcaccg
    19081 ttcataagag aaatagctgc tgggatgaac caaatattta cccagtaaaa catgcctgac
    19141 aggctgaaca taactaccaa agcaacggtt gcagcagata caatccatac aaaggcacca
    19201 gcaatcaaag ccagaccaat accgatttct gctactgtca taaatttttg cataaagagt
    19261 gctacttctt ggtttggcat cataaattcc atgatagtag caaaccaatc aggcattttg
    19321 tccaaaacag ccatcggtgc ttcaccatag gcatagctca aaccaaaaat tggttcagca
    19381 gcttctgccg cagcagttgc cgcttgtgag gcacttgaaa ccgcctcagc agcagatgca
    19441 ccagatactg gatcagctaa ccaagggaat gggaagacaa cttgatcccc aaaccatgat
    19501 gttgttccaa atagaccgaa ggctttcttg ataccttcgt agagccatac tgaaccataa
    19561 aggacacgca ttggcacaga ccagagaaga tttcctttgc ctgaagtatg acctccgaaa
    19621 atgtttcgct tattctgaat gtcaaagaat tcatgacgaa cataagaacc catgtagaag
    19681 aaactacgga tggtaaagaa gtagagtagg tttaccatgt gtttaacagc cattgccata
    19741 aagcctgaca tgtggtattt gtccatcaag aaggctacac cgtagcgtgc tccaatagat
    19801 accataaacc catcatattt acctttgtag ctatgttttt cgccaccctt gattgctgca
    19861 ataatattac ttgccgcagt atggcctgtc tgttcagctg cttgtacaat ctgtggagtt
    19921 ggtttccctt ctgattcttc aaagtaaacc aagtcaccag ctacatagat attttccttg
    19981 cctttcgctt ccatgaactc attggctacc aaacgacctg cacgtgcttt ttcaatacca
    20041 aactcacttg cgtctgtatt ggcttgaaca ccagctgtcc aaatagaggt ataggtagga
    20101 atttgacgac ctgatgaaag tgtcaagcta tcttcttgta cacttgctac accatcacca
    20161 agaaccaatt caacaccttt tttctcaagg tatttgcgag ccttgacttg ctctttttca
    20221 gtaaccatag ccaagatatt tggcgttgcc tcaacaacct taagtgagaa ttcttttgga
    20281 tccaacttga actcacgcgc caagattggt acccagtcaa tcaactcacc gatcatctca
    20341 atacctgtga agccagcacc aataactgta aaggttaaaa gagcgcgacg tttggcttca
    20401 tcatgctcac gcatggcacg atagcaagca tcaatcatgt ggtcatgcaa acgttctgct
    20461 gcttcgatag accaaagtgt aaaaccgtgt tctttaacac ctttcacacc aaagtcatta
    20521 gcctcaccac ccattgcaag gagcaggtaa tcaaaattca gagtttggtg ttccgcaact
    20581 acttgtttct tatcgtagtc aatctcaaca accttgtctg ttaccaattg aacctttgga
    20641 tattttttga agatacgttg aaggtcatac ttgattgcat tggcttctac acgccctgcc
    20701 gcaacttcat gcaactctgt catataggta tggaaagagt tcttatcaat caaggtaact
    20761 gttacatctt gatccttttt aaagtttttt cctagcaatc gagctgctgc aatccccgca
    20821 taaccagcac cgacaatcac aatatttttc gtcacaatgt ttcctccttg tgaaaatcaa
    20881 aacaaattac atgtttccat tataccgtat tccaagatag ttgacaagca aatttcaata
    20941 attagtaata tacacaaaca aaacttgcca tagtgaacaa aaacaagtat gatagtaaaa
    21001 tagataatcg actagaaaga gttttttctc tacacacatg aattctaaac gtcaaacact
    21061 taactttatt acgatgctgg cagctcaggc agttgtcatt tctttgattg aacgactcat
    21121 caccccccca tttgcttttg ctccaggtgc caagctagga ctgggaaatt tgattagctt
    21181 aattgctatt tttaccctcc ctacaaagga tagcctaaag gttgtcgcac tacgcttgct
    21241 catctcaacc tttctgggag gcaccttttc aaccttcctc tatggctttg ccggaactac
    21301 tttgagttat gtaggaatgc tctctgccaa gcagctcggt ccaaaccgtg tcagtcctat
    21361 tggaatttct attctgggcg ggatgttgca caatcttggt cagcttcttg tttttgctac
    21421 cattgcccgt tctttctatg tactgaacta cctgccaatc ctcgctttta caggaatttt
    21481 atcaggctta ttggtcggac tggctgctac ctacctcctc caaaaggtcg gacctttacg
    21541 tcactatcat caacaagtct tagcagaatg gaaataaatc tccctaggtc aactaaggag
    21601 attcttttta tggtccgcac cactttttca ttacccataa taatttcccc ataatcctgg
    21661 tgtcataaat aaaatgagcc acctcatata aacaccactt ataaaatcca tggtaataaa
    21721 aaataatgaa gctttcaaga agagaaaaaa tcaggttctt tgcgtgtttt agtcgtacat
    21781 tttctttctt ttgtgctaca atatcttcat cttttatttt tttgagaaaa ggtagaatta
    21841 tgtcaccatt taggatcaaa ctttctccca gtcagcgaat cattatcagt ttcttattcg
    21901 tgattctgac tggatcaatt ttactaagtc ttcccatctc acaaatcagc acctctacag
    21961 caagttattg ggatcatctc ttcacatctg tctccatggt ttgtgtgaca gggctattta
    22021 ccaaagccgt tgctgaaacc tattccactt ttggacagat tatctgtatg atgctaatcc
    22081 aaattggtgg tttgagcttg ataggattca tcggtctctt cgctttacgc ggtggtcgta
    22141 aaatgaactt catcaatatg gcgaccttac aagaggctct aaaccgatct gacacaaaat
    22201 attttcgtaa cttcctcaaa tcagcttttg gttttacctt ggcggtcgaa gcctttggag
    22261 ccctcttact gtcctttcat tttgtacctg aatttggatg ggcaagaggt ttatttacct
    22321 cgattttcgt agctatatca gccttttgta atgctggttt tgataatttt ggcgcaacta
    22381 gcatcatgcg ctatgtggat aatcctctaa tcaacataac attagccagt ctcattatta
    22441 tgggaggtct tggattctcg gtttggtttg accttcagac acaaatcggg caaaaacgta
    22501 gcctacgaaa actagggttc catacaaaga ttgttctagg cctaacagcc attatactaa
    22561 ccctcggaac tctgactacc ttactcaccg aatggaataa cccttctact atcgggcaac
    22621 tatcatttgg tcataaatta ttagccagct ttttccagac ggtcaccatg cgaaccgctg
    22681 gttttgccag tatcgactac acgaaggctg aaccaatcac cctcttgctc tatatctttc
    22741 agatgatgct tggcggagcc ccaggtggaa cagccggcgg tattaaaata accgccttcc
    22801 taaccttagt gctctatgct cgtagcgaga ttctcggtct ccctcatacc aactttatgg
    22861 gacgaaccat tgataacctc agcatccgca aagcttttgc gacattctcc gtcttcctgc
    22921 ttatgtttat cataggactc ttcgcacttg ccctaacaga tgaccgacaa ccacttctat
    22981 ttttaatgtt cgaggtcatg tcagcattag ccactgtggg tgttacggcc aatctgactc
    23041 caagcctaac catggccggt caagcagtca ttatggcgct catgttcttc ggccgtatcg
    23101 gtccactttc tattctcgca agcctttctg ttcgaaaatt atctaaaacc gaaagtcttc
    23161 aatacgcaaa atcatctatg cttgtttaaa aggagaaatc atgccaaact atactatcgg
    23221 aattctcggc ctgggagttt ttggtactac cattgcaaaa acattacaca attacgattg
    23281 caatatcatt gctattgata atcatgagca acgtatcaat catctagaac ctattctcac
    23341 gcgcggtatt gtcggagaca tcaccgatcg ctcgctccta cgtgcagcag gaatcggtaa
    23401 ctgcgatgct gttgttgtag ctactggcga aaacttggaa tccagtgtcc ttgctgttat
    23461 gcatagcaag gtcctaggcg tccctatggt cattgccaaa gtcaaaggaa caactgcgaa
    23521 agaagtcctt ctccgtgttg gtgctgacaa ggttatttct cccgaacgcg aaacaggtat
    23581 ttccctagca aaacaattac tccaccgcga tacaaccagc ctctttgagc tcgaaggcaa
    23641 tgtttccatt gtcgagtttc acccaccagt aaaatggatt ggcaaaacac tcggcgaatt
    23701 aaaactccgc caacactata aactcaatat tatcggttac cgaagtggcg aaaatcagga
    23761 attaaacatc caactgactc ctgactatgt cttcaaatct gacgaactca tcttagcagt
    23821 aacagaccat aacactgtcg atcattttga agaactgaca aattaatact caatgaaaat
    23881 caaaaacaga ctagctccaa aggtttgggg aacctttgga ggttggagat agggcgaacg
    23941 tagttcgtta ctacttacgc agatagaacc ctgttactat tttgtttcaa ggtaacaggc
    24001 tgaaaggctc cactggagcc tttcactcat caaatcaagt caacaacgtc tgattttgat
    24061 tttcgaagag tataaataac aaatttacgc cctatactcc gttttcaaga gaaatatttt
    24121 atccctagaa agcctactag actatcattt atctagtggg cttatcatct gtcaaaagga
    24181 gaaattatga atgatttaac caaaggaaag ccgattgcgg tcatcttaca attcgctatc
    24241 cccttgttga ttggctcttt ttttcaactg gcctataatt ttgctgattc catgattgtg
    24301 gggcatactt tgggaaagga tgcctttgca agtgtcggtt cgacagccag cctgattttt
    24361 ttaatcatcg gttttgccca aggtgttacc aatggattaa ccattatttc tgcccaacgc
    24421 tttggagctg gcgacttaga ggggcttaaa aaatcttttg tccacggact cttctacgct
    24481 tcactcatca gccttttact aacagtctca gccttagctt ttttgaaacc tatcttagtc
    24541 ttaatgcaaa cgcctgtgag tatcatcgac cactcccatg cctttctaac ggccatgttt
    24601 ggaggattga cctttactat tttttataat ttcctgtctt cagccctacg cagtctcgga
    24661 aactctaaga cacctctact ggctctagtt atcgcttgtt ttatcaatat cggtctggat
    24721 tttttcttta tcttagttat gaactggggc gttttcggag ctggctttgc aactatcctt
    24781 gcccaagcct gttcggtcct ctttcttatt ttttacatta tccacaaggt acctcactat
    24841 catatcggac tagttgattt aaaattggat agaggtaatc tcaagaaaca tgcccagctt
    24901 gcttttccaa tgggatttca agctagtatt atcgccatcg gagccatgac cttgcagttt
    24961 atggtcaacc aactaggaac agacgccatc gccgcccagg ccattgccct tcgtactgac
    25021 cagttggcta tgctgcccat ggtcaatctg ggcttggcta tcgcaacctt tactgctcaa
    25081 aactacggtg ccaagctcta tgaccgtatt cgagaaggag tgcgccactc attactcctc
    25141 agcattgctt gggccattgt atttgcggtc attctcatct tgggcaatcg cttcttctct
    25201 ggtctatttc tgccaaatgc cagtcaaaca gttctggact tggctcttgt ttactacatc
    25261 attaacggct cttgttactg gattgttgct tccctcttta ttctccgtag ctttattcag
    25321 ggacttggca agggctttat tccaacacta gcaggctttg gggaattaat tttccgagca
    25381 gcagtcgcca tcatcggcat gcagtatttc ggcttctatg gaaccgccgc cgctaacccc
    25441 gccgcctgga tcggaagcat catcgttctg attccaagtt ccatcatctt tatgaaaaaa
    25501 ttaaaagctg gacaaagtat ataaagaaaa cgcatgagct catcatgcgt ttttaaaata
    25561 atattttcgt aagaattgaa tatgaaggag attccaaagc atagcgtagc tgatagccac
    25621 tacaaaagct atgccatatt gccaattaaa ttccagcaca aggctaacaa aaaggataat
    25681 tccaagaagg aacaataaca aactacttgt ctttttctta tcccacttaa aataggctaa
    25741 caagggttgg tcaggacaag cttgcacttc cttgaactgt ttaaaactag ctccaagact
    25801 ggctcctgcc gctcctataa ttgcaccaga ataatagtga ggaaggacgt agaccgacaa
    25861 ataagcgacc gtaacatagg caagcaccaa caaggcatac atcagttttt tcatgacaaa
    25921 gccctcctga gcctatttat ctatatacat tttatcattt atgaatcgaa tgaacaagta
    25981 aatatatgtt ctcaaaagca caaaaaagac tagaaaacct agtctttcct tatttattat
    26041 catttattct taggaatttg gatcatccaa actacgccca tgcaaacctt tttcacgttg
    26101 gacttgacgg agtttctctg gcgtcacatc attgccgtct tcatcgacga ccttgatacc
    26161 ttcgatgtgg gtacgcacac tgcggcggta gccctcgatg tactcctcac gaagagccgc
    26221 ctgttcctgc aactcctcct ctgtcaagcc ttctgctttt ttcttgcggg ccagttcatt
    26281 gatccgatcg atttttgctt gttccatgaa tgcctcctac ttactattca agagattgaa
    26341 gaccgccact acagaagcct tatccgctag agctttcaat agagccaagc ggttggcttt
    26401 gactgctgcg tcatctgcca taaccatggt attgtcgaag aaggctgcga tgactgggct
    26461 gagagcaaag agcttgtcca agttgcctgc catgtcttcc atcaattcca agctagatac
    26521 tgctgcagca agggctttct cctgctcatt ttcaaagagt gcctcgtcaa tcgcagtcgc
    26581 ctccgccttt tcagccaagt tgaagacccg tgacaagttt tccacggctt ccttgtagtc
    26641 agcctctttt gatttttgga aaatagcaga gctggctgcc aattgcagtc tgaccacaaa
    26701 tgttgagcta gcaagcacag cctcacggat gtctttcgga atcgccttat ccatcatctt
    26761 ctctacacgg gcacggataa agtccatcac agctggctgg ttgtcatagg tcaagctagc
    26821 aaaattcaag ctgtagagct ccgcaatcaa ctgatccaat ggaatttccc agccaaaggc
    26881 ttccaagatt cgaacgatac cctgtgttgc acgacgaaga gcataagggt cgtttgagcc
    26941 agaaggaatc aagcctactg agaagaagga taggagggtg tcaaacttgt cagccagtgc
    27001 caagaccgca ccgaccttgc tctcaggcaa ttcgccttct gctgaatttg gcaagtagtg
    27061 ctcacggatt gccgctgcca ccgcaggttt ttcccctgca agaagggcat acttctcacc
    27121 catgattcct tgcaattcat caaactcacc gaccatacct gtcaagagat caaacttgta
    27181 gatgtccgcc gcacgcgcca catctgcttt ttcatccgca gacaagccag ccaagtcagc
    27241 caatttttct gcgataacct tggtacgttc catatgctca tagagtgatc cgattttttc
    27301 atggaaggtc acgactttga ggcgttccac caagtcagca atcttgagtt tttggtcttc
    27361 acgccagaag aattcgccgt cttccaaacg agccaccaag actttttcat tccctttgat
    27421 gacattgtca aggtactggt cattcccgtt acggacggag atgaagtttg gcaagagttt
    27481 gccagcctta tcacgcacca cgaagtaacg ttggtgattt ttcatagaag tgaccaaaac
    27541 ttcctctggc acttccaggt atttggtgtc aaaggaaccc atgaaggcag ttgggtactc
    27601 gaccaagttg agaacttcat tgagcaggtc ctcatctatc tcaacggtca cattatgttt
    27661 gtcctcgata gccttgattt gctcgataat catatgttga cgctctgcgg ggtcagtgat
    27721 aacaaactgt gcacgcaagt ctgcctcgta agagtctgca cttgcaatct cggtttcatt
    27781 tccaaggaaa cggtgaccac ggctgatgcg agctgacgaa acgtccaaga agtccatatc
    27841 caatgcctca tcgtccaaga gaacggtcaa ggtgtggaca ggacggatgt aggcgaattt
    27901 gttggacgcc cagttcatgc tgactgggaa ggtcatagcc ttcaagacct ctggaatgcc
    27961 cgccaaaact gtcttagctg gctgaccagc ttcgtgtttg gtcacataga catactcttc
    28021 acccttgatc tcgcggaatt cgatgtctgc tgtcgtcaag cctttgccac ggacaaaacc
    28081 ttctgccgcc ttggtgaagt ttccgtctgc gtccaaggca atcttcttag caggtccctt
    28141 gaaatcttcg gtcaagtctg tctgctggtc cgccaaacca cggacacgaa cagccaaacg
    28201 gcgtggtgtt gaaaagacat cgatgctatc aaaagccaaa cggttgtctg tcaaaaaagt
    28261 cgccatgcgg tcacgcaact ggtgcatggc tggggttacg atgtaggcag gaatttcttc
    28321 caagccaagt tcaattaata gttttttcat accttcttat tctaactttc tgtaattttt
    28381 actcctacac acttagatgt aatatgtttt tcagcactcc acaatgggac aatcttccct
    28441 tcagaatctc taaaagagtt taaaagtcgt tctgatgaat caaggaactc aactagtgaa
    28501 gagttaaatg aaattgatag gattactaat ttcatgtcat cggacgaagt cacaaccgat
    28561 agtaaaatat tattgaattt atcttccggt aacaagccgc tgagcaaatg actcagaatt
    28621 gcacgtttca tcctcttatt atgatattct tcaggtttaa cagaataatc aattttaatt
    28681 tcttcatcta cctttaaact taaagaaatt aaaatatctg gtttttcata tttcaaagac
    28741 attattcaac ctcttcagct aacaattctg ctcgcgttgc ttcatctaaa agtgggaagc
    28801 caagtttctt ccgctctgcc acaaaggttt tggcaacgac acgggcaagg ttacggatac
    28861 gggcaatgta gcctgcacgc tcagttacag acacagctcc acgggcatcc aacaagttaa
    28921 aggtgtgaga gcatttgagc acatagtcaa aggctgggtg aaccaagcct tcttccaaag
    28981 cccgctctgc ttctttttca aacttagtga agttttcaag gagcatatct tggtccgata
    29041 cttcaaagga gtattttgaa tgctcatact ctggctggat gaaaatttca ccgtatttaa
    29101 cgccgtctgc ccattcgatg tcgtaaacgg agtcaacttc ttggatatag gaagccaaac
    29161 gctccaaacc ataagttact tcggctgtga ctggaccagt cgccaagcca ccgacttgtt
    29221 ggaagtaggt aaactgcgta atttccatac cgtccaacca aacttcccag cccaaaccag
    29281 ctgaacctgt tgacgggttt tcccagttgt cctcaacgaa acgaatatcg tgctccaaag
    29341 gattgatgcc caaacgctcc aaagactcca agtagagttc ttggatatta gaaggcgacg
    29401 gtttcataac cacttggaat tggtggtgct gatacaaacg gtttggattt tccccgtaac
    29461 gaccgtccgc aggacggcga gatggctcca cataagccgc attccacggc tcaggaccga
    29521 tagcacgcaa gaaagtatag gggctcatgg tacccgcacc cttttccgta tcataagcct
    29581 gcatgagcaa gcagccctgc tcattccaaa attgttgt
//
LOCUS       DBNFCX010000020        27569 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.020, whole genome shotgun sequence.
ACCESSION   DBNFCX010000020 DBNFCX010000000
VERSION     DBNFCX010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 27569)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27569)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27569
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.020"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(47..1195)
                     /locus_tag="AC1PJC_000756"
     CDS             complement(47..1195)
                     /locus_tag="AC1PJC_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HIP6619777.1"
                     /translation="MTTSRFQLVGSLLRPANLGEFKRQIEAREDIKYPFYDDFDGYKE
                     TEASLIQKIVAEQKENGLDIVTDGEFGRSMWHLDFLWGFDGIERYIAEHGYPFKDHDG
                     QIFETRKDIGLRITAPLSAKNHHFIDIFKQVKELAGETVTKQTIFGPAHAFNELTIFN
                     GQVGPNQVYKTRDELKAGLIAAYKEFLDQYKEAGGQIVQFDDCLWELFDPANPVPFLP
                     QDDSEALAALADEFVAINNAVIDYGHEIGLTVWTHNCRGNYESRSAAGGTYEAIAEKF
                     LRDQKYDRFFLEWDDERAGDLKALESLRDKNVEVVLGLLSSKTSDLDDEERVYKLLEE
                     ASKIIPKERLYLSHQCGFASCDSGNELAIPQQWAKIKQGQEIADKFWS"
     gene            1393..2559
                     /locus_tag="AC1PJC_000757"
     CDS             1393..2559
                     /locus_tag="AC1PJC_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIP6619778.1"
                     /translation="MKKQSPFIIAGIVMLGVVMRAPFTALPAILTDVAAGLGVEVSSL
                     GILTSIPLIMFALCSSLAPRLAAKFGMEKLMALVLLVMVLGSGMRVLNLPALYIGTML
                     VGATIAFINVLLPSLVAANFPKKIGLYTTIYITLMGVAATVASMIAVPIVSSSSWEFF
                     ILLITGLVLLAFLIWLPNVKNNHRFSSENQGKQKSSIWKNKAAIAFLIFGGLQSVLYY
                     TEITWLPTISQSVGFSKAEAGLMAGFFNMTAIPMSMIIPAVLSRQTKEMRRNIMLAIS
                     SVTLLGLAMMALIPTNLILWSALHIILSFSNAALFPYMMLSFTLKTSNSQATAQLSGM
                     VQTGGYLIAAFGPGLLGYSYPIFGNWMPLILALAIVTLAMMWTIVLIEREDIIL"
     gene            complement(2659..2829)
                     /locus_tag="AC1PJC_000758"
     CDS             complement(2659..2829)
                     /locus_tag="AC1PJC_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003002781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3042 family protein"
                     /protein_id="HIP6619779.1"
                     /translation="MAKGFGKGFLTGVLSTVALAAGAVFTVHKTIIEPEEKKEAFIEE
                     NRKKAARKRVAH"
     gene            2898..3782
                     /gene="miaA"
                     /locus_tag="AC1PJC_000759"
     CDS             2898..3782
                     /gene="miaA"
                     /locus_tag="AC1PJC_000759"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HIP6619780.1"
                     /translation="MKTKVIVVIGPTAVGKTALGIELAQRYNGEIISGDSQQVYRKLD
                     IGTAKASPEEQAAAVHHLIDVRDVTEGYSAYEFVAEAKALIADITSRGKLPVIVGGTG
                     LYIQSLLEGYHLGGQVDQEQVLAYRAELDCLSDEDLESMAEQAGLTVEGNSRRRIIRG
                     LELKKFGKNLENTESEYVPLYICLTDDRQVLYDRINQRVDKMMAAGLLDEVSWLYQEH
                     PEAQAAMGIGYKEFFPYFAGELSLEEAVDKVKQNSRRFAKRQLTWFRNRMQVPFYSVG
                     EPDYKSQIFTAVEEFFND"
     gene            3775..5025
                     /gene="hflX"
                     /locus_tag="AC1PJC_000760"
     CDS             3775..5025
                     /gene="hflX"
                     /locus_tag="AC1PJC_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HIP6619781.1"
                     /translation="MIETQKEQERALLVGVELQQTDNFDMSMEELASLAKTAGALVKG
                     VYTQKREKYDSKTFVGSGKLEEIAQMVEADEIDTVIVNNRLTPRQNVNLEEILGVKVI
                     DRMQLILDIFAMRARSHEGKLQVHLAQLKYMLPRLVGQGIMLSRQAGGIGSRGPGESQ
                     LELNRRSIRNQIHDIERQLKTVEKNRATVRERRLQSGVFKIGLIGYTNAGKSTIMNAM
                     TDKRQYEADELFATLDATTKQINLADKFNVTLTDTVGFIQDLPTELISAFKSTLEESM
                     NVDLLLHVIDASDPNHSEQEQVVLDILKDLDMLDIPRLALYNKLDKTDDSFTPSQFPH
                     VMLSAKDENAKGHIQMMVLAKIKTMFERFEVRVPLAESYKLHDLATLALIENRTYEED
                     VEVVSGYIASSNKWKLEEFYDGLS"
     gene            5009..5638
                     /locus_tag="AC1PJC_000761"
     CDS             5009..5638
                     /locus_tag="AC1PJC_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HIP6619782.1"
                     /translation="MTDYLDLAIKYGGFTSLDKVYLAKKLADLTDQQKLDFITPPPSV
                     INAYFAEIYQKQGAEEATDYYLTLSQQLCLFPKEPSFEEDKPFVRLNLSGKSFGFAYV
                     SADGLAQVFSEQEEEVTDSLLFEIAQVFPHYVVFVEEGKIFMKANPFKDAELEEVETD
                     YLLTQVEKAEGLVKISGFNQEEVLEVAEGFSGQSFFAWSGRSAILYIKY"
     gene            5649..6578
                     /gene="rnz"
                     /locus_tag="AC1PJC_000762"
     CDS             5649..6578
                     /gene="rnz"
                     /locus_tag="AC1PJC_000762"
                     /EC_number="3.1.26.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000354350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016891 - RNA endonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0042780 - tRNA 3'-end processing [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Z"
                     /protein_id="HIP6619783.1"
                     /translation="MQIQFLGTGAGQPSKARNVSSLALKLLDEINQVWLFDCGEGTQN
                     QILETTIRPRKVAKIFITHLHGDHIFGLPGFLSSRSFQSSEEQTDIDIYGPVGIRSFV
                     LASLKVSGTRLPYRIHFHEFDVDTVGQVLETDKFTVFAEKLDHTIPCVGYRVIQKDLE
                     GTLDAEALRAAGVPFGPLFGKIKNGQNVTLEDGREIIASDYISPPRPGKVVTILGDTR
                     KCHASVRLAVNADVLVHEATYGKGDEKIARKHGHSTNMEAAQVAKDAGVKQLLLNHIS
                     PRFLSKDISQLRKDASTIFEQVHIVKDLEEIEL"
     gene            6575..7330
                     /locus_tag="AC1PJC_000763"
     CDS             6575..7330
                     /locus_tag="AC1PJC_000763"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070401 - NADP+ binding [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HIP6619784.1"
                     /translation="MRTILITGASGGLVQEMVPLLKDDFLILLGRDVEKIEQLYAYHE
                     KKAVFDVDIRDEIALTAFFDELDSQFGQIDILVNNAGYAIYDDFENFSSQQVQAMFDI
                     NTFALMTLCRLVGKRMKARRSGQMINIISMSGLIASSKSSVYSATKFAATGFSNTIRL
                     ELAQYGVTVTTVNPGPIATSFFDQADPDGSYQESVKAFLLQPDYVARKIVAAMGTRKR
                     DINLPWTLAAAHKLYTLFPRLADYLASTVFNLK"
     gene            complement(7374..10559)
                     /locus_tag="AC1PJC_000764"
     CDS             complement(7374..10559)
                     /locus_tag="AC1PJC_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004181 - metallocarboxypeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family zinc carboxypeptidase"
                     /protein_id="HIP6619785.1"
                     /translation="MKLSYKKRLLNQVLLASTVLLAASLTQGTVFANTEEMLTTASET
                     VTPLPEETPITETSTSEATDNLVEGKETEKQTEEIADTSPTPVSTEEATTSSEPNTEE
                     TTLRSANNDSQDITEEKSAVPTIDTITLETKTVYLSEAVTITESVTLPDTTEKIEWTL
                     DGKPISEWKTWNLKEGDFTGDTFITVEESRQDNQLHLNIQLAALFGEDLSRRTPSNIR
                     RTYRHFIKDMLLEGTSADGNLIISKTLHFRPYEAYRTHEEMLTEIEETKDNAATDRLV
                     RIESIGQSAEGRDIKMAVVAKDQASIDKYLTETTPLMLTKPDQMLKELQAGTFDYKLP
                     ILINNTHADEQPGIDVVTSLFKEFAQKDTVTFPSTDADGNPVTLHLKVTDLLDKFIFL
                     FNFTENPDGDVKNLRSLVNGLDPNRDTGFQVNPETQAIVRQIHKWNPISVLDIHGFVS
                     GFLIEPATPPHDPNFEYDLLADIMLEKAHEMGRAGIANSKYERYTIPKVHWGDGWDDS
                     FSGYTAVYAMYHGILGHTIEIPEGNQESFKAGFFAVLGGVHNMATKPDSLMEMRLKYY
                     SRGVNKIEDPKAESELVGPDGAVVGRVKKDQPKFFPDYYVIPMTLDKHNDMQEAFKMI
                     EYFNRNGVIVKELTEDVGNFRKGDLVVDMAQAKRGFANHVLYAGSDESAWGAMYAELV
                     VNFPDMKGFSAKAVFEENAFSGKLGSITWTKAPRTTEIDFKAPYYIVANTSESAVQAI
                     NQAIKSGAKVYLTDDGYIMETNQFSHLLDTYALYGEPLYKKPLGQELKAMKVYAPSHS
                     YSWAGDFAILANAALAVERMGFAIVNSADEADAIILESDQFDASVFGKKPIIIVGGVA
                     MQKLEELGILAGFNAEQFTDGGDYEGLMRAIIDDKDPLTSGYAMNGLFYSNSGNWIEG
                     IPEGFKTLVKIADKDYYIAGWWPGHDKLANKIVAIAGNYQDQPVFIYAGNPTNKVHPV
                     HFFRWVSNALFGSQLATLEDLPAVEILVPQPEMPKNILDEAPKTTTVVHTTKSTDAKQ
                     LPQTGEKTNYIAIALGSLLLGSISLRRKKRS"
     gene            10775..12322
                     /gene="cls"
                     /locus_tag="AC1PJC_000765"
     CDS             10775..12322
                     /gene="cls"
                     /locus_tag="AC1PJC_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008808 - cardiolipin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0032049 - cardiolipin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HIP6619786.1"
                     /translation="MEKLWKIIYSRTFIVISLIVLTIFLILWLVGSAATYMPALLIVL
                     QIFSIFVAISIINRPMNTSFKLTWIVFVIGIPIFGALFYFILQSNIETKRYRKNFHKQ
                     AQRLREYSKTSEKVMKALEREDKEQLKLAHFMSEYVGYPIHTNTDAVYFSTGQEKFEA
                     LLEELKKAEQYIFMEYFIVDMGYMWDSILDILKEKAAQGVEVRFMYDGMNSLTNLPYN
                     YYKTLRKYGIKAKVFSQIIPALSTVQNNRDHRKIAIIDGKVAFTGGINIADEYINKKV
                     RFGYWKDAAIMIRGEAVANFTLMFLQMWNYNEKTETDDLQYLKTHKDLETETIDAEGF
                     FLPYGENPFDGDEVAKRVCLDMIQSATDYIYIMTPYLVLDDEMIDNLTYAAKRGVEVR
                     ILLPHIYDKKSAYLAARTDFPTYLEAGIEIFEFQPGFVHSKVVLVDDKKATVGTVNMD
                     FRSFYLNFECGLYIYNHSAVLAAIKDDFTHSFKKSQQINLLTFHKTYSWYKRLGGALL
                     RIISPLL"
     gene            12479..14692
                     /gene="recJ"
                     /locus_tag="AC1PJC_000766"
     CDS             12479..14692
                     /gene="recJ"
                     /locus_tag="AC1PJC_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008409 - 5'-3' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HIP6619787.1"
                     /translation="MIKPNYDWQLLTGFSDEQFIKVAKKEGLDPVAAKLLYERGIHSA
                     EELHTFLQPSLEDLHDPYLLHDMDKAVERIRRAIEDYEQILIYGDYDADGMTSASILK
                     ETLEEMGAEVQVYLPNRFTDGYGPNQSVYKYFIEQQGISLIVTVDNGVAGHEAIAYAQ
                     EMGVDVVVTDHHSMQETLPNAYAIVHPEHPEGNYPFKHLAGCGVAFKLACALLETVHA
                     DLLDLVAIGTIADMVSLTDENRVMVKYGLSLLKQTERAGLQELIKIAGIDIDSIDEEA
                     VGFQLAPRLNALGRLDDPNPAIELLTGFDDEEAHQIALMIDSKNVERKDVVQAIYDEA
                     KTMLRRDRPVQVLAKEGWNPGVLGIVAGRLLEELQQPVIVLSIEDGKAKGSARSVEAV
                     DIFKALKDHQDLFIAFGGHAGAAGMTLEVDKLEELAQTLADYIIENKLDLSSKSSLVL
                     DEELDLEELTLDTLKSFEKLAPYGMDNKKPVFYIRDFQVESARTMGQNNAHLKVRITK
                     GAAGFDVVAFGKGNLALEFSQAKGLELAVTLSVNQWNGNTSLQLMLVDARVNGVQLYN
                     IRGKQHPIPAGVPILDIENPVADNKAIVLANLPEDLSSLRSYFQEREFEAIYFKNEIA
                     KPYYLDGYGSREQFAKLYKTIYQFDEFDVRYKLKDLAVYLKIKDSLLVKMIQIFQELE
                     FVTITDGVMRVNKEAQKREISESQIYQELKETVIQQELMALGTVQEIYEWLCGRV"
     gene            14671..15840
                     /locus_tag="AC1PJC_000767"
     CDS             14671..15840
                     /locus_tag="AC1PJC_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3114 domain-containing protein"
                     /protein_id="HIP6619788.1"
                     /translation="MAMWSRLMTVEALVVVGVIGTLLYTYWFIRQKGLLKNLEQITEI
                     KHALIELRRVGWSERAIKKVFLKQLLPLKQEDIPAFVQNFIKEATIFASTSFYQLIRV
                     DSRSLSQEKATALLEQSMNMLDFPEELSHGILPELLQKMDVNCPPHHPFWRYFAKLVD
                     KAFPVRELEVKRPLNRQVHQLRYLISYQQAFWVRQQFGKGKTDWQALIAYLRSLPRWS
                     YRLRESARLHNKQLFGKKNQKTLPVNMKILIHFHSEFILNQDGQFALILEERPHINGV
                     VNGASFNYARANNKRHRQLDMAPVGRQDPVFRKELLRSKMGVYLSPTRFRRYQKGRNE
                     VGWEQSYFNQQGSFSYGGHSRAACVANLRRRFAKDIGLKCTKKQFHGIMKSKNYF"
     gene            15855..16367
                     /locus_tag="AC1PJC_000768"
     CDS             15855..16367
                     /locus_tag="AC1PJC_000768"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001049318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0006168 - adenine salvage [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HIP6619789.1"
                     /translation="MNLKDYIATIPNYPKEGIEFRDISPLMADGNAYSYAVREIVQYA
                     TDKQIDMIVGPEARGFIVGCPVAFELGIGFAPVRKPGKLPREVISADYEKEYGVDTLT
                     MHADAIKPGQRVLIVDDLLATGGTVKATIEMIEKLGGIVAGCAFLIELDDLKGREAIG
                     DYDYKVLMHY"
     gene            16471..17412
                     /gene="metA"
                     /locus_tag="AC1PJC_000769"
     CDS             16471..17412
                     /gene="metA"
                     /locus_tag="AC1PJC_000769"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004414 - homoserine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase MetA"
                     /protein_id="HIP6619790.1"
                     /translation="MPIKIEKSLPAVEILRKENIFVMDSDRASHQDIRPIKILILNLM
                     PQKIVTETQLLRLLANTPLQLEVEFLYMASHESKNTHSDHLKQFYKTFEQVRDSYFDG
                     LIVTGAPVENLPFEEVDYWQELTQVFDWSKTHVYSTLHICWGAQAGLYARYGVPKHSM
                     SRKLSGVYCQEVTNPTSPLMRGFDDEFRSPHSRYTEVREADIAHLSGLTILSQGPEVG
                     LSILASKDLREIYSFGHLEYDRDTLAKEYQRDCIAGKNPHLPENYFKEDDPASKPSLS
                     WNLPAAQFFTNWVNYAVYQETPYDWHIFEQSAQSASL"
     gene            17422..18096
                     /locus_tag="AC1PJC_000770"
     CDS             17422..18096
                     /locus_tag="AC1PJC_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaD domain-containing protein"
                     /protein_id="HIP6619791.1"
                     /translation="MNYSQQFRQGHLVLPAAILFHYQELFPSADDFLIWQFFLYQNSS
                     AIESLAPSEIAQATGKTVAQVNQAIENLQDAGLLEFKTISIAGEIEMIFDALPAFEKL
                     DVLLTPKQAVEIVQPENDLKTLVGDFERELGRFLSPFEIEDLQKTIEDDKTSIDLVRA
                     ALKEAVFNNKTNWKYIQAILRNWRREGITTVAQVEAKNAEREIQTPKNVTVSSDFLDA
                     MDLWKD"
     gene            18098..18781
                     /locus_tag="AC1PJC_000771"
     CDS             18098..18781
                     /locus_tag="AC1PJC_000771"
                     /EC_number="2.1.1.217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0160105 - tRNA
                     (adenine(22)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenine(22)-N(1))-methyltransferase"
                     /protein_id="HIP6619792.1"
                     /translation="METKLSKRLETVASFVPQGARLVDVGSDHAYLPLFLVEQGRIDF
                     AIAGEVVQGPYQSALQNVEQAGQTEKILVRLANGLGAFETSDHMTAVTIAGMGGRLIA
                     EILEAGKEKLATIERLILQPNNREDDVRRWLEKNGFRLVSEKILEENGKLYEVLVAES
                     GQMRLSEVEHRFGPYLLEEASPVFVKKWRRELEKLSSALEQVPSERQGDRFAISQKIQ
                     QIQEVVHVS"
     gene            18771..19565
                     /locus_tag="AC1PJC_000772"
     CDS             18771..19565
                     /locus_tag="AC1PJC_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000881127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051540 - metal cluster binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HIP6619793.1"
                     /translation="MLASQVIERYQAFCPPSLAMEGDVKGLQIGTLNKEIQRVMVALD
                     IRETTVAEAIDKKVDLIIVKHAPIFRPIKDLVADNPQTKMYLDLIKHDIAVYVSHTDI
                     DVVEGGLNDWFCELLEIQDTTYLIETAEGQGLGRVGTIAEQTLEELALKVKSVFGLDA
                     VRLVTYGHQAKQYVSRVAICGGSGGSYYHEALAKGADVYITGDIYYHTGQDMLTQGLL
                     AIDPGHHIEALFIKKIAELLETWKAKEGWDVEILPSTVSTNPFRHL"
     gene            19741..20565
                     /locus_tag="AC1PJC_000773"
     CDS             19741..20565
                     /locus_tag="AC1PJC_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HIP6619794.1"
                     /translation="MTWFTNQSVVLQALLGGLFTWFCTIVGSAVVFFFKTVSRRLLDT
                     MLGFAAGVMIAASFWSLLAPSIEYAESSYGNLAWIPAAVGFAAGGIFLRLVDAWVPHL
                     HLGNDKDKAEGGGEKDRKNLSKTALLFLAITIHNIPEGLAVGVTFGALASNYSPAAFI
                     GAIGLAIGIGIQNIPEGAALAIPIRTDGASRWKAFYWGSMSAIVEPIAAVIGAFAVTF
                     MTPILPYALSFAAGAMIFVVVEELIPESQTNGNTDIATLGLMAGFIIMMILDVALG"
     gene            20655..20963
                     /locus_tag="AC1PJC_000774"
     CDS             20655..20963
                     /locus_tag="AC1PJC_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009853951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR/SmtB family transcription factor"
                     /protein_id="HIP6619795.1"
                     /translation="MNYLEILKVLANSSRLHILHLLKNPREHFVHKPQSEVDMVEVGV
                     CLEEIQRVSGLSQSTTSTYMNMMKKVGLVQVTRLGKYTYFKRNEEVLTSLSSYLVNDL
                     "
     gene            21088..22272
                     /locus_tag="AC1PJC_000775"
     CDS             21088..22272
                     /locus_tag="AC1PJC_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent flavin oxidoreductase"
                     /protein_id="HIP6619796.1"
                     /translation="MTKQLTDTVVLRHGAELDSRIVMSPMLTYSGSEGGFATEDTLNY
                     YRARSQAASLLITEFHYVSPTGGPSSRPGYPEQLGIQDDDHLDSITAIAQALKKDGNK
                     AILQIHHGGREARARGAKGHEVLAPSQLDFSFLPYPVREMTHEEIVEIIKDFGRATKR
                     AIDAGFDGVEIHGANHYLIQQFFSAFSNHRQDKWGGSLKKRMTFALEVVKEVKSVIAR
                     YAPKDFIIGYRLSPEEIHGTTIGYSYKESLALVAEIAREELDYISLSIWGGFEAGPAG
                     LNQSYGQLFKEVVGDQTQIIVVGSIFTEEDAQKAVSEHTDLIAIGRGTLIDPLFGQKI
                     KDGRGKSIVSEISPEQVPATSWTSGLHEAFTREDSLGLPNLPGQESILHLHRGIYDSV
                     EH"
     gene            22387..23256
                     /gene="rfbA"
                     /locus_tag="AC1PJC_000776"
     CDS             22387..23256
                     /gene="rfbA"
                     /locus_tag="AC1PJC_000776"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002276675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008879 - glucose-1-phosphate
                     thymidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HIP6619797.1"
                     /translation="MKGIILAGGSGTRLYPLTRAASKQLMPIYDKPMIYYPLSTLMLA
                     GIKDILIISTPQDLPRFKDMLGDGSELGISLSYAEQPSPDGLAQAFIIGEEFIGDDNV
                     ALILGDNIYHGNGLTKMLQRAASKEKGATVFGYQVKDPERFGVVEFDADMNAISIEEK
                     PEEPKSNFAVTGLYFYDNDVVEIAKNIKPSPRGELEITDVNKAYLERGDLSVELMGRG
                     FAWLDTGTHESLLEAAQYIETVQRLQNVQVANLEEIAYRMGYITKEQVHELAQPLKKN
                     EYGQYLLRLIGEA"
     gene            23256..23849
                     /locus_tag="AC1PJC_000777"
     CDS             23256..23849
                     /locus_tag="AC1PJC_000777"
                     /EC_number="5.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018029578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016857 - racemase and epimerase activity,
                     acting on carbohydrates and derivatives [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase family
                     protein"
                     /protein_id="HIP6619798.1"
                     /translation="MTENFFGKTLAARPVEAIPEMLEFDIPVHGDNRGWFKENFQKEK
                     MLPLGFPESFFAEGKLQNNVSFSRKNVLRGLHAEPWDKYISVADGGKVLGTWVDLREG
                     ETFGNTYQTVIDASKGIFVPRGVANGFQVLSDFVAYSYLVNDYWALELKPKYAFVNYA
                     DPSLDIQWENLEEAEVSEADENHPLLKDVKPLRKEDL"
     gene            23849..24334
                     /locus_tag="AC1PJC_000778"
     CDS             23849..24334
                     /locus_tag="AC1PJC_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HIP6619799.1"
                     /translation="MFQAFLEIAEQLNKLGITPLLMGSVGLERRTGRDWQARDLDIHV
                     PSDPRGWEAPDDERIYQADALISMMNKLGYVLVDRHEHEFHKDGLAVEFGGLHSLPEF
                     AGVELEDLEELETAGVRYYLPTLEQYLKIYQASSKDSYRAENNNQKDFAKIAYLKEIL
                     R"
     gene            24523..25569
                     /gene="rfbB"
                     /locus_tag="AC1PJC_000779"
     CDS             24523..25569
                     /gene="rfbB"
                     /locus_tag="AC1PJC_000779"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000134275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008460 - dTDP-glucose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009225 - nucleotide-sugar metabolic
                     process [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HIP6619800.1"
                     /translation="MSQFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN
                     KANIEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTN
                     FIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSP
                     YSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLY
                     GEGKNVRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKD
                     AYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTNFSEGLEETIQWYTDNQDWWKAEKE
                     AVEANYAKTQEVIK"
     gene            25624..26475
                     /gene="rfbD"
                     /locus_tag="AC1PJC_000780"
     CDS             25624..26475
                     /gene="rfbD"
                     /locus_tag="AC1PJC_000780"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019780653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008831 - dTDP-4-dehydrorhamnose reductase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HIP6619801.1"
                     /translation="MILITGANGQLGTELRYLLDERGVEYVAADVAEMDITDANKVDA
                     FFAEVKPSVVYHCAAYTAVDMAEDEGKELNYKINVIGSENVAKAAAKYGATLVYISTD
                     YVFNGELPVGQEWQVDDQPDPQSEYGRTKRLGEEAVEKFADKFYTVRTAWVFGNYGKN
                     FVFTMQNLAETRDTLTVVNDQHGRPTWTRTLAEFMVHLVDTKQAFGYYHLSNDAAEDT
                     TWFDFATEILKDTNTKVLPVDSSQFPAKAKRPFNSTMSLDKAKATGFVIPTWQEALEA
                     FYKQEKK"
     gene            26492..27535
                     /locus_tag="AC1PJC_000781"
     CDS             26492..27535
                     /locus_tag="AC1PJC_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009986 - cell surface [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HIP6619802.1"
                     /translation="MKKKAIVKPLLMSGIFLALLGGATLPSGAVPVVAAETSQSTTYH
                     LTDDEKVAVREYIQAKMTIDMQEYRLAFLEGMMEEMASGSAEAAWDEEIADLKANLTA
                     EQVVVLDELEANLIGSIAQHYHYLFETLTVAGKSGREEAAAIVSKYESEDDVSTPEAE
                     LAALKYAREVIVELLNKESAAIDNYIAYAEATGQELAGLLESGNSNLETITSATIGYG
                     QALATASQPKFPYDFSEIDRQIAELTASLQSKVEDKSTANIENTGAQTSQSATNGSND
                     LQDVPGQGDGHISDVATGKGSISEVGQKKVIPNDKAKVLPKTSGKSGLPLTVLGLMII
                     FAGWLLTKKQEEK"
BASE COUNT         7948 a         5364 c         6255 g         8002 t
ORIGIN      
        1 ccctgccaaa tggcggggct tttatgcacg aataacaaga agtggtttaa gaccaaaact
       61 tgtctgcaat ttcttggcct tgtttaattt ttgcccactg ttgcgggatg gccaattcat
      121 tacctgaatc acatgaagcg aatccacatt gatgtgacaa gtagagacgc tcttttggaa
      181 taatcttgct tgcttcctcg agtaatttgt aaacacgttc ttcatcatcc aaatcagaag
      241 ttttacttga aagtagacca agaacgactt cgacattctt gtcacgcaag ctttccaaag
      301 cttttaaatc acctgcacgt tcatcatccc actcaaggaa gaatcgatcg tatttttggt
      361 cacgcaggaa tttttcagca atagcttcgt aagttccgcc agctgcagag cggctttcat
      421 agttaccacg gcagttgtgc gtccagacgg tcaagccaat ttcatgcccg taatcaataa
      481 cagcattatt gatagcaaca aactcatcag ccaaagcagc caatgcttca gaatcgtctt
      541 gtggcaagaa aggtacaggg ttagcagggt caaataattc ccaaaggcag tcatcaaatt
      601 gaacgatttg tccaccagct tccttgtact ggtctaaaaa ttccttatag gcagcgatga
      661 gcccggcttt taattcatca cgagtcttgt agacctgatt tggtccaact tgtccattga
      721 aaattgtcaa ttcattaaag gcatgggctg gaccgaaaat agtctgtttg gttacagttt
      781 ctcctgctaa ttctttcact tgtttgaaaa tatcaatgaa atggtgattt tttgcagaaa
      841 gtggagcagt aatacgcaat ccaatatcct tacgtgtttc aaaaatctgt ccatcatggt
      901 ctttaaatgg ataaccatgt tcagcaatgt aacgctcgat accatcgaag ccccagagaa
      961 aatctaggtg ccacattgaa cgaccaaatt ctccatctgt cacaatatcc aaaccgtttt
     1021 ctttttgttc tgcaacaatt ttttggatga gtgaagcttc agtttctttg taaccatcga
     1081 agtcatcata gaatgggtat ttgatgtctt cacgagcttc gatttgtcgt ttaaattctc
     1141 ctaagtttgc tggtcgaaga agtgaaccga ctaattggaa tcttgaagtt gtcatatatg
     1201 tatctctctt tcgttttagt gatgaaccta ttctaactca gaagctatca tttgaaaaat
     1261 agttattttc atggcaaatc catagttaaa aactataact agaaaaaaag acagaaataa
     1321 ctttctatca tttgtcaact atggtataat cgaaagtgct gaaatccgaa cattaggaga
     1381 cttaggagaa aaatgaaaaa acaatcaccc tttataattg caggaatcgt catgctaggg
     1441 gtcgtgatgc gtgccccctt tacagcttta cctgctattt tgacagatgt tgcagcagga
     1501 ctgggagtag aagtgagttc attaggaatt ttaacctcta ttccgctcat catgtttgct
     1561 ctctgttcat ccttagcacc gcgtcttgcg gctaagtttg gcatggaaaa actaatggcc
     1621 ctagtcttac tggttatggt gcttggttca gggatgcgag ttctcaactt accagccctt
     1681 tacattggta ctatgcttgt tggtgctaca atagcgttta ttaatgtttt gctaccaagt
     1741 ttggttgcgg ctaattttcc aaagaaaatt ggtctatata cgacgattta tatcactctc
     1801 atgggggtgg cggcaacagt tgcatccatg attgctgttc caattgtatc ctctagttct
     1861 tgggaatttt ttattctgtt aattacagga ttggtgcttc tggctttcct aatctggttg
     1921 cctaatgtaa aaaataacca tcgattttca agtgagaacc aaggaaaaca gaaatcatct
     1981 atctggaaaa ataaagcagc gattgccttt ttgatatttg gtgggctaca atcagtcctc
     2041 tactatacag agattacctg gttgccaacc atttctcaat cagttggctt tagtaaggca
     2101 gaagcaggtc taatggctgg tttctttaat atgacagcta ttcccatgtc aatgattatc
     2161 ccagctgttc tttcccgtca gacaaaagaa atgcgtcgaa atatcatgct ggctatttcc
     2221 tctgttacct tgcttggctt ggctatgatg gcattgattc cgaccaatct cattctttgg
     2281 tcagcacttc acattatttt aagtttttca aatgcagccc tcttccctta tatgatgttg
     2341 agctttactt tgaaaacaag caatagccag gctactgccc agctatcagg gatggtgcag
     2401 acaggtggct atctcattgc agcgtttgga ccaggccttc tcggttatag ctatccaatc
     2461 ttcggaaact ggatgccatt gattcttgct ctggctatcg tcacacttgc catgatgtgg
     2521 actattgttc tcattgaaag agaagatatt attttataaa gtataatccc ttaagaaggc
     2581 tggcattttt ctgtgaaaat ggcagagctt ctaagggatt ttttgtcaaa caaaaaaagc
     2641 tggacctttg ccagcttttt aatgtgctac acgtttacga gcagcttttt tacgattttc
     2701 ctcaatgaag gcttctttct tttcttctgg ttcaatgatt gttttgtgaa cagtgaagac
     2761 tgcacctgct gcaagagcaa ctgtagaaag aacacctgtc aagaaacctt taccaaaacc
     2821 tttagccata gttatttctc ctttacttgt gttataatag attttagcga aaaaacaaaa
     2881 tattttcaag gaaaaagatg aaaactaaag ttattgtggt cattggacca actgcggtag
     2941 gaaaaactgc tttaggcatt gaattggccc agcgctacaa tggagaaatt atcagcggtg
     3001 atagccagca agtttatcgc aaactggata ttggtacggc aaaagctagt cctgaagagc
     3061 aggctgctgc ggtgcatcac ttgattgatg tccgagatgt gaccgagggc tattcggctt
     3121 atgaatttgt agcagaagcc aaggctttga ttgcagacat tactagtcgt ggcaagttac
     3181 ccgttatcgt gggtgggaca ggactttaca tccaaagtct gttagaaggc taccatctgg
     3241 gcgggcaggt tgaccaagag caagttcttg cttatcgggc ggaactcgac tgcttgtctg
     3301 atgaggattt ggaatcaatg gcagagcagg caggtttgac ggtcgaagga aacagccgac
     3361 ggagaattat tcgtgggtta gagttgaaaa aatttggcaa gaatttagaa aatacagagt
     3421 cagaatatgt gcctctttac atctgcttga cggatgacag acaggttctt tatgaccgca
     3481 tcaatcagcg agtggataag atgatggcgg cgggcttact ggatgaagtt agctggctct
     3541 accaagaaca cccagaagct caagccgcta tgggaattgg ctacaaggag tttttccctt
     3601 attttgcagg tgagctttcg ctagaagaag cagttgataa ggtcaagcaa aatagccgcc
     3661 gctttgccaa acgccaattg acctggttca gaaatcgcat gcaggttccc ttttattcag
     3721 taggcgagcc agattacaag tcgcagattt tcactgccgt ggaggaattt tttaatgatt
     3781 gaaacgcaga aagaacaaga acgcgccctc ctggttggag tggaattaca gcagacagat
     3841 aattttgaca tgtccatgga ggagttggca agccttgcta agacggctgg cgctctggtc
     3901 aagggagtct acactcaaaa acgagaaaaa tacgacagca agacttttgt cggctcaggg
     3961 aaactagaag aaattgccca gatggtcgaa gctgatgaga ttgataccgt cattgtcaat
     4021 aaccgactga cgccccgtca gaatgtcaat ttggaggaga ttttaggtgt caaggtcatc
     4081 gaccgtatgc agttgatttt ggatattttt gccatgcgag cacggagtca cgagggtaaa
     4141 ctgcaggtcc acttggccca gctcaagtac atgttgccac gcttggttgg acaaggtatc
     4201 atgctcagcc gtcaggcggg tggtattggc tctcgtggac caggtgaaag ccagttggag
     4261 ctcaaccgtc ggagcattcg caaccagatt cacgacatcg aacgccaact caaaacagtt
     4321 gagaaaaatc gagcgactgt ccgtgaacgc cgtctgcaat caggcgtgtt caaaatcggc
     4381 ttgattggct ataccaatgc tggtaagtcc actattatga atgccatgac ggataagcga
     4441 cagtacgagg cggacgaact ctttgcgaca cttgatgcta cgaccaagca gattaacttg
     4501 gctgacaagt tcaatgtgac cctgactgac acggttggtt ttattcagga cctgccgacc
     4561 gagttgattt ctgccttcaa gtccaccttg gaggagtcca tgaacgtgga cctcttgctc
     4621 catgtcatcg atgcttctga ccccaatcac agtgagcaag agcaggtagt cttggatatt
     4681 ctcaaagacc tggatatgct ggacattcca cgtctagctc tctacaacaa gttggacaag
     4741 acggacgaca gctttacccc cagtcagttt cctcatgtca tgctgtccgc taaggatgaa
     4801 aatgccaaag gccatataca gatgatggtc ttggccaaga ttaagaccat gtttgaacga
     4861 tttgaggtca gggttccact tgctgaatct tataaattgc atgatttggc aactctagct
     4921 ctgatagaaa atcggaccta cgaagaggat gtggaagtgg tatcaggcta tatcgcttcc
     4981 agcaataaat ggaagttgga agaattttat gacggattat cttgatttgg caatcaaata
     5041 cggtggcttt accagcctgg acaaggtcta tctggctaag aaattagctg atttgactga
     5101 ccaacaaaaa ctagatttta tcacgccacc gccttcagtt atcaacgctt attttgcgga
     5161 aatctaccaa aaacaagggg cagaagaggc gacggattac tatctgaccc tctctcagca
     5221 gctctgcctt tttccaaaag agcccagctt tgaagaagat aagccctttg tccgcctgaa
     5281 tttatctggt aagtctttcg gatttgccta tgtgtcggct gacggtctgg cccaggtttt
     5341 ttcggagcaa gaggaggaag tgacggatag cttgctcttt gaaattgccc aagtctttcc
     5401 ccactatgtt gtctttgtgg aggagggcaa gattttcatg aaagccaatc cctttaagga
     5461 cgccgagtta gaggaagttg aaacagacta cctcttgacc caggtggaaa aggcagaagg
     5521 tttggtcaag atttcaggct ttaatcagga agaagtgctg gaagtggcgg aaggtttttc
     5581 tggtcagtca ttttttgcct ggtcgggtcg ctctgcaatt ttatatataa aatattagaa
     5641 agtaaacaat gcaaattcaa tttttaggta cgggggctgg tcagccctcc aaggctcgaa
     5701 atgtatccag tttggccttg aaactcttgg atgaaatcaa tcaggtttgg ttatttgact
     5761 gtggcgaagg aactcaaaat caaattttgg aaacgactat tcgtccacgt aaggtcgcaa
     5821 aaatctttat cactcacctg cacggagacc atatttttgg tctgcctggt tttttgtcta
     5881 gccgttcttt ccagtcaagt gaggagcaga ctgatattga tatttacggt cctgttggca
     5941 tccgttcctt tgtcttggca agtttgaaag tttcagggac acgcctacca tatcgcattc
     6001 attttcatga gtttgatgtt gatacggtag gtcaggtcct ggaaacggac aaattcacag
     6061 tattcgctga aaaactggac cataccattc cttgtgtcgg ctatcgtgtc atccagaaag
     6121 atttggaagg gacattggat gcagaggctt tgcgcgcggc aggtgtacca tttggccccc
     6181 tttttggaaa aatcaaaaac ggtcaaaacg taaccttgga ggacggcagg gaaatcattg
     6241 ccagcgacta tatttctcct ccaagacctg gtaaggtagt gaccattctt ggtgatacgc
     6301 gcaagtgtca tgctagtgtc cgtctggctg tcaatgctga tgtgctggtg catgaggcga
     6361 cttacggaaa aggcgatgag aagattgctc gcaagcatgg acattcgacc aatatggaag
     6421 ccgctcaggt tgctaaggat gcgggtgtca agcagctctt gcttaatcat atcagtccac
     6481 gatttttatc aaaggatatt agtcaattac ggaaagatgc aagtactatt ttcgagcagg
     6541 ttcatattgt caaggattta gaggaaattg agctatgaga accattctaa tcacaggtgc
     6601 ctctggtggc ttggtacagg aaatggtgcc attgctgaag gatgattttt tgattttact
     6661 aggtcgtgat gtcgaaaaaa ttgagcagct ctatgcttac catgaaaaaa aggctgtctt
     6721 tgatgtagac atccgagatg aaatagctct gacggcattt ttcgatgaac tggatagtca
     6781 gtttggtcag attgatattt tagtcaataa tgctggctat gccatttacg atgattttga
     6841 gaatttttcc agccagcagg tgcaggctat gtttgacatc aatacttttg cccttatgac
     6901 tctgtgccgt ttggttggta agcggatgaa ggcaagacgg agcgggcaga tgatcaatat
     6961 catttccatg tcaggcttga ttgcttcaag taaatcgtca gtttattcgg cgaccaagtt
     7021 tgcagctacg ggtttttcca ataccattcg cttggaatta gcccagtatg gtgtgacggt
     7081 tactacggtc aatccaggtc caatcgcaac cagctttttc gaccaagcag atccagacgg
     7141 cagctatcaa gagagtgtca aggctttctt gctgcagcca gactatgtgg ctcgtaaaat
     7201 cgtcgcagcc atgggaacta ggaagaggga catcaacctg ccctggactc tggcagcagc
     7261 ccataaactc tatacgcttt ttccaagact ggcggactac ttggccagta cagtatttaa
     7321 tttgaaataa gcatagaaaa acgccgaaat aacactcggc gttttcgtgt atactagcta
     7381 cgcttttttc tacgtaagga gatactgcct agaagtaggc tacctaatgc gatagcgata
     7441 tagtttgttt tttcacctgt ttgaggtagt tgttttgcat cggtagactt ggtggtatgt
     7501 actactgtag tagtttttgg cgcctcatcc agaatatttt ttggcatttc aggttgcggt
     7561 acaagaattt ctacagctgg taagtcttct aaggttgcta attggctacc aaatagggcg
     7621 ttggacaccc aacggaagaa gtgaacaggg tggaccttgt ttgttggatt acctgcatag
     7681 ataaagacag gttggtcttg ataatttcca gcgatggcga caattttatt ggctaatttg
     7741 tcatgaccag gccaccaacc tgcgatataa taatctttgt cagcgatttt aacaagtgtt
     7801 ttaaatcctt caggaatgcc ttcaatccaa ttaccggagt tggaatagaa aagtccattc
     7861 atagcgtagc cacttgttaa tggatcttta tcatcaataa tagcccgcat gagaccttca
     7921 tagtcaccac catctgtaaa ttgttccgca ttgaaacctg ctaagattcc taattcctcc
     7981 agtttttgca tggcgacacc acctacgatg ataattggtt tcttaccaaa tacactggca
     8041 tcgaattgat cagattcgag aatgatagca tcagcctcat ctgcgctatt gacaattgca
     8101 aagcccattc gttctaccgc aagtgcagca tttgcaagaa tggcaaagtc gcctgcccaa
     8161 ctataagagt gagaaggagc atataccttc attgctttca attcttgtcc aagaggcttc
     8221 ttatagagag gttcgccgta tagagcatag gtgtccagca agtggctaaa ttggttagtt
     8281 tccatgatgt agccatcgtc tgtaagatag accttagcac ctgatttgat ggcttggtta
     8341 atggcctgaa cggcgctttc agatgtgttt gcaacgatat agtaaggcgc tttgaaatca
     8401 atttccgtag tacgtggagc ttttgtccat gtgatgctac ctaatttgcc gctaaaggca
     8461 ttttcttcaa atacagcctt ggcgctaaag cctttcatat ctgggaagtt gaccaccaat
     8521 tcagcataca tggctcccca agcagattca tcagaaccag cgtagaggac atggttagcg
     8581 aatcctcgtt tggcttgagc catatcgaca actaggtcgc ccttgcggaa gtttccaaca
     8641 tcttcagtta attccttgac aataacccca ttacgattga aatattcaat catcttaaag
     8701 gcttcttgca tatcgttgtg tttatcgagc gtcataggaa tcacatagta gtctgggaag
     8761 aattttggct ggtctttttt gacacgtccg acaacagctc cgtctggtcc gactaattca
     8821 gactctgctt ttggatcttc tatcttattg acgccgcgag aatagtattt gagacgcatt
     8881 tccatgagac tgtctggctt ggttgccata ttgtgaacac cgcccaaaac agcaaagaat
     8941 cccgccttga atgattcttg atttccttct ggaatttcaa tcgtatgtcc aagaataccg
     9001 tggtacattg catacaccgc tgtatagcct gagaaggaat cgtcccaacc atctccccag
     9061 tggactttag ggatggtgta gcgttcatat ttagaatttg caatacctgc tcggcccatt
     9121 tcatgagctt tttccagcat aatatcggct agtaaatcat attcaaagtt cgggtcatgt
     9181 ggcggagtgg caggctcgat gagaaatcca gatacaaaac catgaatatc taaaacagat
     9241 attggattcc atttgtggat ttgacggacg atggcttgtg tttctggatt cacttggaaa
     9301 ccagtatcgc ggttagggtc caaaccattt actagtgaac gcaagttttt aacatcgcca
     9361 tcaggatttt ctgtgaaatt gaacaagaag ataaatttat ctaacaaatc tgtcactttt
     9421 aaatgcagag taacaggatt tccatcggca tctgtagatg ggaaggtaac ggtatctttt
     9481 tgtgcaaatt ctttgaatag gctagttacc acatctatgc cgggttgttc atcagcatga
     9541 gtgttgttga tgagaatagg taatttatag tcgaaggttc cagcttgcaa ctctttcagc
     9601 atctggtcgg gtttggtcag catgagtggc gttgtttcag taagatattt atcaatactt
     9661 gcttgatctt tagccacaac agccattttt atatctctac cttcagctga ttgaccaatt
     9721 gactcaatcc ttactaggcg gtcggtcgca gcattatctt tagtttcctc aatctctgtc
     9781 aacatttcct catgtgtacg gtaggcttca taaggacgga aatgaagagt ttttgaaatt
     9841 atcaagtttc catcggcact agtaccttcc aacagcatat cttttataaa atgtcgatag
     9901 gtacggcgaa tattactcgg tgtccgtctg ctcaaatctt ctccaaagag agctgcgagc
     9961 tggatattca aatgaagttg gttatcctgt ctgctttctt ctactgtgat aaatgtatcg
    10021 cctgtgaaat ctccctcttt caaattccag gttttccatt cggaaatagg ctttccatcc
    10081 aatgtccatt ctattttttc agttgtatct ggaagagtga cagattctgt gatagtgact
    10141 gcttccgata gatagacagt ttttgtttcg agtgtaattg tatcaatagt cggtacggca
    10201 gatttttctt ctgtaatatc ctgactatca ttgttagctg atctgagcgt agtttcctcg
    10261 gtattgggct cggaagatgt tgtagcttct tctgtggaaa caggtgtagg agaagtatct
    10321 gctatttctt cagtttgttt ttctgtctcc ttcccttcta caagattatc tgtagcttcg
    10381 cttgtgctag tttctgtgat aggagtctct tcaggcagtg gagtcactgt ttcactagca
    10441 gtagttagca tctcctctgt atttgcgaag accgttccct gagtgagaga tgcagctaaa
    10501 agaactgttg aggcaagcag gacttgattc aacagccttt tcttatatga aagtttcatg
    10561 cgaacttcct ccttttgata atgtgtacgg ggtagtaaat taaaacgggt tatttcatgc
    10621 ctatcttatc aaaaaatata tgtctttaca atataagttg aatatgttta tatatttaaa
    10681 atattcagaa atatcggatt ataaagacta tttattttga gtaggataat gaactaaaat
    10741 ctgttataat ggtaaaaaaa taagggagag atgtatggaa aaactttgga aaattatata
    10801 cagtcggacc tttatcgtca ttagtttgat tgttctaacc attttcctta ttctatggtt
    10861 ggtaggttcg gcagctacct atatgcctgc tctattgatt gttttgcaaa ttttttcgat
    10921 ttttgtagct atttcaatca tcaatagacc gatgaatacc agttttaagt taacctggat
    10981 tgtttttgtc ataggtattc cgatttttgg tgctctattc tattttattt tgcagtccaa
    11041 catcgaaacc aaacgctatc gtaaaaattt tcataagcaa gcacaaagac ttcgggagta
    11101 tagcaaaacg tctgaaaagg tcatgaaggc attagagcgg gaagataagg agcaactgaa
    11161 attagctcac tttatgagtg agtacgttgg ctacccaatt cataccaata cggatgccgt
    11221 ctatttttcg acaggtcagg aaaaatttga agctctacta gaagaattga aaaaggcaga
    11281 gcagtatatt ttcatggagt actttattgt cgatatggga tatatgtggg attccatcct
    11341 tgacattttg aaggaaaagg cagcgcaagg ggtggaagtt cgttttatgt atgatgggat
    11401 gaattcactg accaatcttc cctataatta ctataaaacc ttgagaaaat atgggataaa
    11461 agccaaagta ttttctcaaa ttatcccagc cttatctacg gtgcaaaata accgtgacca
    11521 tagaaaaatt gcgattattg atggaaaggt tgcctttact ggtggcatta atatcgcaga
    11581 tgaatacatc aacaagaaag tgcgttttgg ttactggaaa gacgcagcga ttatgattag
    11641 gggagaagct gttgcaaact ttacgttgat gttccttcaa atgtggaatt acaatgaaaa
    11701 gacagagaca gatgatctac aatacctcaa aacgcataaa gatttagaga cggaaaccat
    11761 tgatgctgaa ggtttcttcc ttccgtatgg cgagaatcca tttgatggag atgaggtagc
    11821 caaacgagtc tgcctagaca tgattcagtc ggcaacggat tatatttata tcatgacacc
    11881 ctacttagtg ttggatgatg aaatgattga taatttgact tatgctgcga agcgtggagt
    11941 cgaggttcgc attctgcttc cgcatatcta cgataaaaaa tcggcttatt tggctgctcg
    12001 tactgatttt ccgacttact tggaagcagg aattgaaatc tttgaattcc agcctggatt
    12061 tgtccattcc aaagttgttt tggtcgatga taagaaagct actgttggta cggtgaatat
    12121 ggattttcgc tctttttatc ttaattttga gtgcggtctc tatatttaca atcactcggc
    12181 agttttggca gctattaagg atgactttac tcattccttc aaaaaatcac agcaaattaa
    12241 ccttctaacc ttccataaaa cgtactcttg gtataagcgt ttgggaggag ccctactgcg
    12301 aattatttca ccgttattat aaatttgcac tattagttct tcatggagca agggatcgac
    12361 attctgtttc ggtcttacct tgctccattt ttcttggaaa atgatataat agaaagatag
    12421 tttatactcg gaaaatttac agactacttg tgattttgag tattaaggag taaaaaaagt
    12481 gataaaaccc aactatgact ggcaattatt gaccggtttt tctgatgaac aatttatcaa
    12541 agttgctaaa aaagaaggat tggaccctgt agctgcaaag ttactctacg aacgtggtat
    12601 ccattcggcg gaagaattgc atactttctt acaaccaagc ttagaagacc ttcacgatcc
    12661 ctatttacta catgatatgg ataaggcggt agagcggatt cgccgagcaa tcgaagatta
    12721 cgaacaaatt ttgatttatg gagattatga cgcagacggc atgacctcgg catcgattct
    12781 gaaagaaact ctggaggaaa tgggggcaga agtccaagtt tatcttccta accgtttcac
    12841 agatggctat gggccgaatc agtcagttta caagtatttt atcgagcagc aagggatttc
    12901 tcttattgtg acggtggaca atggcgtagc gggtcatgaa gcgattgcct atgctcagga
    12961 aatgggtgtc gatgttgtcg tgacagacca ccattccatg caggaaaccc ttcccaatgc
    13021 ctatgcgatt gtacatccag agcatccaga aggaaattat cctttcaaac atttggcggg
    13081 ctgcggtgta gccttcaaat tggcctgtgc tcttcttgaa actgttcatg cagacttgct
    13141 ggatttggtc gcaattggca ccatcgctga tatggttagc ttaaccgatg agaatcgtgt
    13201 catggtcaaa tatggtctct cgcttctcaa acagactgag cgagcaggtt tgcaagagtt
    13261 gataaagata gctggtattg acatagacag tattgatgaa gaagcagttg gtttccaact
    13321 tgctccgagg ttgaatgccc ttggtcgact cgacgatcct aatccagcca tcgaattact
    13381 gactggtttt gatgacgaag aggcccatca aattgctctc atgattgaca gtaaaaatgt
    13441 agaacgcaaa gacgtcgtcc aagcaattta cgatgaagca aaaaccatgc tccgtcggga
    13501 tagaccggtt caagttctgg ctaaagaagg ttggaaccca ggtgttttag ggattgtagc
    13561 aggacgccta ctagaagaat tgcagcaacc tgttatcgtc ttgtctattg aagatggtaa
    13621 ggcaaagggt tcggctcgtt ctgttgaagc agttgacatt ttcaaggccc ttaaagatca
    13681 tcaggaccta tttatcgcct ttggtggtca tgctggtgca gcaggtatga ccttggaagt
    13741 tgacaaactt gaagagcttg ctcaaacctt ggctgactac attatcgaaa ataaattgga
    13801 tttatccagc aagtcttcgc tggtcttaga tgaagaattg gatttagagg aattaaccct
    13861 agatactcta aaatctttcg agaagcttgc gccttatggc atggataata aaaagcctgt
    13921 attctacatc agagactttc aggtggaatc agcaagaacc atgggacaaa acaatgctca
    13981 cctgaaagta cgaattacaa aaggtgctgc aggatttgat gtcgttgctt ttggtaaggg
    14041 caatctagcc ttggaatttt cacaggccaa gggcttagaa ctagctgtca ccttgtctgt
    14101 caatcaatgg aatggcaata ccagtcttca gctcatgttg gttgatgctc gggtcaacgg
    14161 tgttcaactt tataatattc gtggaaaaca acatcctatt cctgcaggag tcccaatttt
    14221 ggacattgaa aatccagtag cagataacaa agcaattgtc ttggctaact tgcctgagga
    14281 cctcagtagt ttgcgtagct attttcagga aagagaattt gaagccattt attttaaaaa
    14341 cgaaattgcc aaaccgtact atctagatgg ttatggtagc cgagaacaat tcgctaaatt
    14401 gtataagact atttaccaat ttgatgagtt tgatgttcgc tacaaactga aagatttggc
    14461 agtttactta aaaattaagg acagtctatt ggttaaaatg attcagattt tccaagaatt
    14521 agaatttgtc acgattacgg atggggtcat gcgggtcaac aaagaggcac agaagcgaga
    14581 gatttcagaa agtcaaattt atcaagaatt gaaagaaaca gttatccaac aagagttgat
    14641 ggcgcttggc accgttcagg aaatttatga atggctatgt ggtcgcgttt gatgacagta
    14701 gaagctctgg ttgttgttgg agtgattgga acgcttctct acacttattg gtttatcagg
    14761 caaaaaggtt tgttgaaaaa tcttgaacag ataaccgaaa taaagcacgc actgattgaa
    14821 ttacggcgag taggatggtc agaaagagcc atcaaaaagg ttttcctgaa acaactgttg
    14881 cctctaaaac aagaagacat cccagcattt gttcaaaatt tcataaaaga agctactatt
    14941 tttgcctcga ccagctttta tcagttgata agagttgaca gtcgctcttt aagccaagag
    15001 aaagcgacgg ctttattgga gcaaagtatg aatatgttag attttcctga ggaattaagt
    15061 cacgggatat tacctgaact tttgcagaag atggatgtga attgtcctcc acaccatccg
    15121 ttttggcggt actttgctaa gctagttgat aaggcttttc cagttcggga attagaagtc
    15181 aaacggccgt taaacagaca ggtccatcag ctgcgctacc ttatttccta tcagcaggct
    15241 ttttgggtac gtcagcagtt tggaaaagga aaaacagatt ggcaggctct gatagcctat
    15301 ttacgtagcc tacctcgatg gtcttaccgc ttacgagaat ctgcccgcct acacaataaa
    15361 caactgttcg gcaagaaaaa tcagaagact ttgccagtca atatgaagat tttgattcat
    15421 tttcacagcg aatttatcct aaatcaagat ggacaatttg ccttgatttt agaagaacga
    15481 cctcatatca atggcgtggt aaacggggct tcctttaatt atgccagagc taataataag
    15541 cgccatagac aacttgatat ggctccagtt ggcaggcagg atcccgtttt tcggaaagaa
    15601 ttgctacgct caaagatggg agtctactta tcgcctactc gctttcgtcg ctaccaaaaa
    15661 ggaagaaatg aggttggctg ggagcagtct tactttaatc agcaaggaag cttttcctat
    15721 ggtggacata gtagggcagc ttgtgtggcg aatttgagga gacgatttgc taaagatata
    15781 ggtctgaaat gtaccaaaaa acaatttcat ggtataatga agagtaaaaa ttatttttaa
    15841 aaagagagag acaaatgaac ttaaaagatt acatcgcaac aattcctaac tatccaaaag
    15901 aaggtatcga attccgtgac attagccctt tgatggcaga tggaaatgct tatagctatg
    15961 cagtacgtga aatcgttcag tatgcgacag ataagcaaat cgatatgatt gttgggccag
    16021 aggcgcgtgg tttcatcgtt ggatgtccag ttgcctttga attgggaatc ggttttgcac
    16081 cagttcgtaa gccaggtaag ttaccacgtg aggttatctc agctgactat gaaaaagaat
    16141 atggtgtaga tacattgacg atgcatgcag atgcaatcaa accaggacaa cgtgtcttga
    16201 ttgtcgatga cttgttggcg actggtggta ctgtaaaagc aacaatcgaa atgattgaaa
    16261 agcttggcgg tatcgttgct ggctgtgcct tcttgattga gctagatgat ttgaaaggcc
    16321 gcgaagcaat cggtgattac gactacaagg ttttgatgca ctattaatct aaggttatag
    16381 gcaaaactta taactggtcc tatttttatt ctaattgaat tgcatagcaa cctgtcttat
    16441 aataaatata agaaaattgg gaggatgctt atgccaatta aaattgaaaa atcattacca
    16501 gcagttgaaa ttttgagaaa agagaatatt tttgtgatgg atagtgaccg agccagtcat
    16561 caggacattc gtcctatcaa aatccttatt ctcaatctca tgccacagaa gatagtgacg
    16621 gagactcagt tgctccgtct tttggctaac actcctttac agctagaggt tgaatttctc
    16681 tacatggcta gtcacgagtc caaaaataca cactcggacc atttgaagca gttttataag
    16741 acttttgagc aggtcaggga tagctatttt gatgggctca tcgtgacagg agcaccagtt
    16801 gaaaacttac cttttgagga agttgattac tggcaagaac ttactcaagt ttttgattgg
    16861 tcaaaaacac atgtttattc aacattgcac atttgttggg gggcacaggc aggtttgtat
    16921 gcacgctatg gtgtacccaa acacagtatg tctcgaaaac tatcaggcgt atattgtcaa
    16981 gaagtgacta atccaactag ccctcttatg cgtggatttg acgatgaatt tcgttcacca
    17041 cactctcgtt atacggaagt aagagaagca gatattgccc atctgagtgg gttgacgatt
    17101 ttatcacaag gtccagaagt tggcctatcc attttagcca gcaaggattt aagagaaatt
    17161 tatagttttg gacatttaga gtatgatagg gatacactag ctaaggaata tcaacgtgat
    17221 tgtatagctg gaaaaaatcc ccatttaccg gaaaattatt tcaaagaaga tgaccctgca
    17281 agcaaaccat ctctctcttg gaatttacca gcagcacaat tctttaccaa ctgggtgaat
    17341 tatgctgtct atcaagaaac tccatacgac tggcatatct ttgaacaatc agcccagtca
    17401 gctagtcttt aaagaggaag tatgaactat tcacagcaat ttcgtcaggg acatttggtc
    17461 ctgccagcag caatattatt ccactatcaa gagctttttc cgtcggcaga tgattttttg
    17521 atttggcagt ttttcttata tcaaaattct tcagctatcg aatcattagc gcctagtgag
    17581 attgctcaag ctactggtaa aacagttgct caggtcaatc aagctattga aaatctccaa
    17641 gatgctggac tcttagaatt taagacaatc agtattgctg gtgaaattga aatgatattc
    17701 gatgcgcttc ctgcttttga aaaattggat gttctgttaa ctccaaaaca ggcagttgag
    17761 attgtgcaac cagagaatga tttgaagacc ttggtgggtg attttgaacg tgaattgggc
    17821 cgctttttat cgccgtttga aattgaagat ttgcagaaga ctattgagga tgacaaaact
    17881 tcgattgatt tggttcgtgc agccttgaaa gaagctgttt ttaacaacaa aacaaattgg
    17941 aaatacatcc aagctattct acgaaactgg cgccgtgagg gaattactac agttgcgcaa
    18001 gtagaagcga aaaatgcaga aagagaaatt cagactccta agaatgtgac tgtttcaagt
    18061 gactttcttg atgcaatgga tctctggaaa gattgatatg gaaacaaaat tatctaaaag
    18121 gctggaaaca gtcgcaagtt ttgtcccaca aggggcacgt ctagttgatg tagggagtga
    18181 ccatgcttat ctccctcttt ttttggtaga gcaggggcgt attgattttg ccattgcggg
    18241 ggaggtcgtt caaggtccct atcagtcagc gcttcagaat gtagagcagg cgggacaaac
    18301 agaaaaaatc ctagtccgtt tggcaaatgg cttaggtgca tttgagacgt ctgaccatat
    18361 gactgccgtg accatagcag gtatgggggg acgcttgatt gcggaaatct tagaagcagg
    18421 taaagaaaag cttgcgacta ttgaacgttt gatactccag ccaaataatc gtgaagatga
    18481 tgtgcggcga tggttggaaa aaaatggttt cagattggtt tctgaaaaga ttctggaaga
    18541 aaatggcaag ttatatgaag tcctcgttgc agaatcagga cagatgagat tatcagaagt
    18601 tgaacatcgt tttggtccct atctactaga ggaggcctca ccagttttcg tcaaaaaatg
    18661 gagaagagaa cttgaaaaat taagttctgc tttggaacaa gttccatctg aacgccaagg
    18721 tgaccgcttt gccatttccc aaaagatcca acaaattcag gaggtagtcc atgttagcta
    18781 gtcaggttat tgagcgctat caagcatttt gtcccccttc tttggctatg gaaggcgatg
    18841 tcaaagggct gcaaatcggt actcttaata aagagattca acgtgtcatg gtggctctgg
    18901 atattcgtga gacaacagtg gcagaggcga ttgataaaaa ggtggatttg attatcgtca
    18961 agcacgctcc gatttttcgt ccaataaagg atttggtggc tgacaatccg caaactaaaa
    19021 tgtatcttga tttgattaag catgatattg cagtctatgt tagtcataca gatattgatg
    19081 tggttgaggg ggggctcaac gactggttct gtgaactatt agaaattcaa gacactacct
    19141 acttgattga aactgccgag gggcaggggc ttggccgtgt ggggacaata gcagagcaga
    19201 ctttggagga attggctttg aaagtcaagt ctgtctttgg tctagatgct gtccgtctag
    19261 tgacctatgg gcaccaagcc aagcaatatg tcagccgtgt agccatctgt ggaggcagtg
    19321 gtgggtctta ctaccatgag gctctggcca agggggcaga tgtttacatc acaggcgata
    19381 tttactacca tactgggcag gacatgctga cccagggctt gctggctatt gatccaggcc
    19441 atcatatcga agccttattt atcaagaaaa ttgctgaatt gttggaaaca tggaaggcaa
    19501 aagaaggttg ggatgttgaa attctacctt caactgtttc aaccaatccg tttagacatt
    19561 tgtgataaat taatcagcac ttgattgtgg aaagaccaag acgacattta atgtagtttt
    19621 aggtctttta ttttttagat attttcttat ttatttaagt gaaaaagctt gaattttata
    19681 ataaattagg gtatcttaat tcataggata tgcaagatta cacaggatag gatgttagtt
    19741 atgacttggt ttaccaatca gtctgtagtt ctacaggctt tgctaggtgg tttattcaca
    19801 tggttttgta cgattgtggg gtctgccgtt gtatttttct ttaagacagt tagtcgtcgt
    19861 ttgctagata ccatgctagg ctttgcagct ggtgttatga ttgcggcttc tttttggtct
    19921 ttattagccc catcgattga gtatgctgaa agttcatacg gtaatctggc ttggatacca
    19981 gcagcagtag gttttgcagc aggtggtatt tttttacgct tggtagatgc ctgggttccg
    20041 catttgcatt tgggaaatga taaagataag gcagaaggtg gtggtgagaa ggatagaaaa
    20101 aatctatcca aaacagccct gctcttctta gctattacaa ttcacaatat tcctgaaggc
    20161 ttggcggtcg gtgtgacatt tggtgcactt gcttctaact atagtccagc agcttttatc
    20221 ggcgcaatcg gtcttgctat cgggattggt atacaaaata ttcctgaagg ggcagccttg
    20281 gctattccaa ttcgtacaga cggcgcatct aggtggaaag ctttttattg gggatctatg
    20341 tcagcaattg ttgagccgat tgcagcagtc atcggggctt ttgcggtcac ctttatgaca
    20401 cctattttac cttatgccct ctcctttgcg gcaggagcca tgatttttgt cgtcgtagaa
    20461 gagctcattc cagaatcgca gacaaacggc aatacggata ttgctactct aggactcatg
    20521 gctggtttta ttatcatgat gattttggat gttgccctgg gttaaggcag cacttacaag
    20581 ccaacccctg accgttggtc tttccaaaag taaaatttct aaaaaaatga gcttttttat
    20641 gataaaataa gactatgaat tacttagaaa tcttaaaggt cttggccaat tcaagtcgcc
    20701 tacatatctt acatctatta aaaaatccaa gagaacattt cgttcacaag ccccaaagtg
    20761 aagtggatat ggtagaagtg ggagtctgtt tggaggagat tcaaagagtc tcaggtctca
    20821 gccagtctac cacctccacc tatatgaaca tgatgaaaaa agtgggcctg gttcaggtaa
    20881 ctcgattagg gaagtacaca tattttaaac ggaatgagga agtgctgaca tcactatcga
    20941 gttatttagt aaatgattta taaaccagac ttcgatctgg ttttttgctt gcagaacaaa
    21001 tcgagttttt tcgatttatt cttgtctttt ccaactgagt gtgctaaact attcatatct
    21061 gaaaaattga atatgagagg tattcagatg accaaacagt tgacagatac agtagtctta
    21121 cgccacggag ctgaattgga cagccgaatt gtcatgtctc ctatgttgac ctattcaggc
    21181 agcgagggcg gttttgcgac tgaggataca ctcaactatt atagggctag gtcccaggca
    21241 gccagtctcc tcatcaccga atttcattat gtcagcccaa caggcggtcc cagttctaga
    21301 cctggctatc cagagcagct gggaatccag gatgatgatc atctggactc catcacagcc
    21361 attgcccagg ccttgaaaaa agatggaaat aaggcaattt tgcagattca tcatggtggt
    21421 cgagaagccc gagctagagg agccaaagga catgaagtgt tggcaccgag tcaactggat
    21481 ttctccttct tgccctatcc tgttcgggag atgacccatg aagaaatcgt ggaaatcatc
    21541 aaggattttg gaagagctac aaagagggct attgatgcag gctttgatgg cgttgaaatc
    21601 catggtgcca accactatct gatccaacaa ttcttctcag ccttctccaa ccatcgtcag
    21661 gataaatggg gtggcagtct taagaaacga atgacctttg ccctagaagt ggtcaaggaa
    21721 gtgaaatccg tcattgcccg ctatgctccc aaggatttta tcatcggcta tcgtctttcg
    21781 cctgaggaaa tccatggtac caccattggt tattcctata aggaatccct ggccttggtt
    21841 gctgagatag ccagggaaga attggattat atcagtcttt ccatttgggg cggcttcgag
    21901 gctggtccag caggtctcaa tcaatcttat ggtcagcttt tcaaggaagt ggtaggtgac
    21961 caaacccaaa taatcgttgt gggctctatc tttacggaag aggatgctca aaaagcggta
    22021 tctgaacaca ctgatttgat tgcgattggt cgaggaaccc ttattgaccc tctttttggt
    22081 caaaaaataa aagatggaag aggcaaatct atcgtatcag agatttctcc tgagcaagtt
    22141 ccagccacct catggacaag tggcttacat gaagccttta ctagagagga ttccttagga
    22201 ctgccaaatc tacccggcca ggaatcgatt ttacatttgc atcgagggat ttatgattca
    22261 gtggaacatt gataaaagag gagtttctcc tctttttttg cagtcacggg cctaggattg
    22321 taagatgaca gccatttcaa agtatggtat aatgaactga tattaattta gggaaggtac
    22381 tcttatatga aaggtattat tctagctggt gggtcaggta cacgcttgta tcctttgacg
    22441 cgcgcagctt caaaacagtt gatgccaatt tatgataaac caatgatcta ttatccattg
    22501 tcaacattga tgttggctgg aatcaaagat attttgatta tttcaactcc gcaagatctt
    22561 ccacgtttta aggatatgtt aggagatggt tctgaacttg gaatttcact ttcatatgca
    22621 gaacaaccaa gcccagatgg attggcccaa gccttcatta tcggtgaaga attcatcggt
    22681 gatgacaatg tagccttgat ccttggtgat aatatctatc acggcaatgg attgactaag
    22741 atgttgcaac gtgctgcaag caaagaaaag ggagcgactg tctttggtta ccaagtaaaa
    22801 gacccagaac gttttggggt tgttgagttt gacgctgata tgaatgccat ctctatcgaa
    22861 gaaaaacctg aagagccaaa atcgaatttt gctgttactg gtctctattt ctatgacaat
    22921 gatgttgtgg agattgctaa aaatatcaag ccgtcccctc gtggcgagtt ggaaatcaca
    22981 gatgtcaaca aggcttactt agaacgcggc gacttatctg ttgagcttat gggccgtgga
    23041 tttgcttggt tggatacagg tacgcatgaa agcctcttgg aagctgcaca gtacatcgaa
    23101 acggttcaac gtttgcaaaa cgttcaagtg gctaacttgg aagaaattgc ttaccgcatg
    23161 ggctacatta caaaagaaca agtacatgaa ttggcacagc cacttaagaa aaatgaatac
    23221 ggacaatact tgctccgttt gattggagag gcctaatgac agaaaatttt ttcggtaaaa
    23281 cactagcagc tcgcccagtt gaagctattc cagaaatgtt agaattcgac attcctgttc
    23341 atggcgacaa ccgtggctgg ttcaaggaga acttccaaaa ggaaaaaatg ttgcctctcg
    23401 gcttccctga aagcttcttt gcagaaggaa aattgcagaa taatgtttcc ttctcccgca
    23461 aaaacgttct tcgtggtctt cacgcagagc cttgggataa atacatttca gtagcagacg
    23521 gcggtaaggt tttgggaact tgggtcgatc ttcgtgaagg agagaccttc ggtaatacct
    23581 accaaaccgt tatcgatgct tcaaaaggta tcttcgttcc gcgtggagta gccaacggtt
    23641 ttcaagtctt gtcagatttc gtggcttaca gctacttggt caacgactac tgggctttgg
    23701 agcttaagcc taagtatgcc ttcgtcaact acgctgaccc tagcctcgac atccagtggg
    23761 aaaatctaga agaagcagaa gtttcagaag cagatgaaaa ccacccgctc ctcaaggacg
    23821 tcaagccttt gagaaaagag gacctctaat gtttcaagcc tttttggaaa tagcagagca
    23881 gttaaacaag ttaggaatca ctcccttgtt aatgggctca gttggtttgg aaaggcggac
    23941 aggacgagat tggcaggcaa gggaccttga tattcatgtg cccagtgacc cacgtggctg
    24001 ggaagcccca gacgacgaac ggatttatca ggcggatgcc ttgatttcta tgatgaacaa
    24061 actaggctat gtcctggttg accgtcatga acatgaattt cataaagatg gcttagctgt
    24121 tgaattcgga ggcctacatt cactgcctga atttgctggt gtagagctag aagatttgga
    24181 agaactagaa acagcaggtg ttcgctatta cctaccgaca cttgaacaat acctgaaaat
    24241 ctatcaagcc tcttcaaaag attcctaccg agcagaaaat aacaatcaaa aagactttgc
    24301 taagattgct tacttaaagg aaatcttgag gtaaaaaaag cgagcgaagc gagcagttct
    24361 gtgtgtcatc gccgtagtga gacgctcctt tgctttgcta aggagcgggg gaaaccatga
    24421 gatcttaggc tcatggttta gtaatgaaac accttggtgg ttgcttacga ccccactacc
    24481 taagatgaca cacaaaaaag aaaaaacttt tcggagaaaa aaatgtctca atttaaaaat
    24541 attatcgtaa ctggtggagc tggtttcatc ggttcaaact ttgtacacta tgtttataac
    24601 aatcatccag acgttcacgt aactgttttg gataaactta cttatgctgg taacaaagct
    24661 aacatcgaag ccatccttgg tgaccgtgtt gagctagttg ttggcgacat tgcagatgct
    24721 gagttggttg acaaattggc tgctaaggca gatgccattg ttcactatgc ggcagaaagc
    24781 cacaacgaca actctctcaa cgatccaagc ccatttatcc ataccaactt tatcggtacc
    24841 tatactcttc ttgaagcggc tcgtaaatac gacatccgtt tccaccatgt atcgaccgac
    24901 gaagtatacg gtgaccttcc tttgcgtgaa gatttgccag gtcatggcga aggtccaggt
    24961 gagaaattca ctgcggaaac caactacaac ccatcatcac cttactcatc aaccaaggct
    25021 gcttcagact tgattgttaa agcatgggtg cgttcgtttg gtgttaaagc aactatttcc
    25081 aactgttcaa acaactacgg tccttaccaa cacatcgaga aatttatccc acgccaaata
    25141 accaatatct tggcaggtat taagccaaaa ctttacggtg aaggtaaaaa cgtccgtgac
    25201 tggattcata ccaacgacca ctcgactggt gtttgggcaa tcttgacaaa aggccgtatg
    25261 ggtgaaactt acctaatcgg tgctgacggt gagaagaaca ataaagaagt gcttgaattg
    25321 attcttgaaa aaatgggtca accaaaagat gcttatgacc atgtgactga ccgtgcagga
    25381 cacgatttgc gctatgctat tgacgcaagc aaacttcgtg atgagcttgg ttggacacca
    25441 cagtttacca acttctctga aggtttggaa gagactatcc agtggtatac agataaccaa
    25501 gactggtgga aggctgaaaa agaagctgtt gaagctaatt acgcgaaaac gcaagaagtt
    25561 attaaataag acaattgaag gctggggctt tggcccaagc ctttcttgaa acgaggagca
    25621 aacatgattt taattacagg tgcaaatggt cagttgggaa ctgaattgcg ttatctcttg
    25681 gatgagcgtg gtgttgaata cgttgccgct gacgtagcag aaatggatat cacggatgca
    25741 aacaaggtag atgccttctt tgcagaagtt aagccaagcg ttgtctacca ctgtgcagcc
    25801 tacacagcgg ttgatatggc agaagatgaa ggcaaggagc tcaactacaa gatcaacgta
    25861 ataggttctg agaatgttgc taaagcggca gctaaatacg gtgcaaccct tgtctacatc
    25921 tctacagact atgtcttcaa cggtgagttg ccagtcggtc aagagtggca agtagatgac
    25981 caaccagatc ctcaatcaga atatggtcgt accaagcgct tgggtgagga agcagttgag
    26041 aaatttgctg acaaattcta cactgttcgt acagcttggg tctttggtaa ctacggtaaa
    26101 aactttgttt tcactatgca aaatcttgcg gaaacccgcg atactttgac ggttgtcaat
    26161 gaccaacacg gtcgtccaac ttggacccgt acccttgcgg aattcatggt acacttggtg
    26221 gacaccaagc aagcatttgg ttactaccat ttgtcaaatg atgcagcaga agatacgact
    26281 tggtttgact ttgcgactga aatcctcaaa gatactaata ccaaggtatt gccagtagat
    26341 tctagccaat tcccagccaa agccaaacgt ccatttaact caacaatgag cttggacaag
    26401 gcaaaagcca caggctttgt catcccgacc tggcaagagg ctttggaagc attttacaaa
    26461 caagaaaaga aataatctac aggagatgtg tatgaaaaag aaagcgattg ttaagccgtt
    26521 gttgatgtca ggaatttttc tggctttact aggaggtgct acattaccgt ccggagctgt
    26581 tccagttgta gcagcagaga caagtcaaag tacgacctat catttaactg atgatgaaaa
    26641 agttgccgta cgtgaatata ttcaagctaa aatgactatc gatatgcaag aatatagatt
    26701 ggcgtttctt gagggaatga tggaagaaat ggcttcgggt agtgctgaag ctgcatggga
    26761 tgaagaaatt gcagacttga aggcaaactt aacagcagag caagttgttg ttttagatga
    26821 actcgaagca aatttaattg gtagcatagc ccagcattac cattacttat ttgagacact
    26881 tacagtcgct ggaaaaagcg gaagagaaga agcagcggct atagtttcta agtacgagtc
    26941 tgaagatgat gtaagtactc ctgaagccga attggctgca ttgaaatacg ctagagaagt
    27001 tatcgttgaa ctactgaata aagagtcggc agcgattgat aattatattg cttatgcaga
    27061 agcaactgga caagaattag ctggattatt ggaaagtgga aactctaatt tagaaactat
    27121 tacatctgca actataggat atggtcaagc tcttgcaact gcttcgcaac caaaatttcc
    27181 atatgacttt tcagaaatag accgacagat tgcagaacta actgctagtc tacaatcaaa
    27241 agtcgaggat aaaagtacag ctaatattga aaatactggg gcacaaacaa gtcaaagcgc
    27301 tacaaatggc tcaaatgatt tgcaagatgt tccaggtcaa ggggacggtc atatttctga
    27361 tgtagctaca ggaaaaggca gtatttccga agtaggtcag aaaaaggtta taccaaatga
    27421 taaagctaaa gtattaccaa aaacttcagg gaaatctggt cttccattaa ctgtactagg
    27481 gctcatgata atttttgctg gttggctatt gacaaagaag caagaagaaa aatagaagat
    27541 tagtgtaatt gcatctattt tgagaaata
//
LOCUS       DBNFCX010000021        27268 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.021, whole genome shotgun sequence.
ACCESSION   DBNFCX010000021 DBNFCX010000000
VERSION     DBNFCX010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 27268)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27268)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27268
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.021"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..462
                     /locus_tag="AC1PJC_000782"
     CDS             <1..462
                     /locus_tag="AC1PJC_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011681501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rgg/GadR/MutR family transcriptional regulator"
                     /protein_id="HIP6619803.1"
                     /translation="LDELTDYLFSVEYWGYYELLIFMNTLDVLKYDVFIVLAREMSRR
                     SDFFKEIPNNRRLISTMLLNAYITCIERQNLMDALYFEKQLKQCFFIETEIYERLVFL
                     YAQNLYRYRKTGSKFAIVEMRKCIGAMKLAGSDHVAQIYEEHLKKILTENS"
     gene            543..611
                     /locus_tag="AC1PJC_000783"
     CDS             543..611
                     /locus_tag="AC1PJC_000783"
                     /inference="COORDINATES: protein motif:HMM:TIGR04079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KxxxW-cyclized peptide pheromone"
                     /protein_id="HIP6619804.1"
                     /translation="MSKELEKVLESSAMAKGDGWHV"
     gene            675..1994
                     /gene="kwcM"
                     /locus_tag="AC1PJC_000784"
     CDS             675..1994
                     /gene="kwcM"
                     /locus_tag="AC1PJC_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014621777.1"
                     /note="This protein, a peptide-modifying radical SAM/SPASM
                     domain protein, cyclizes KxxxW-containing RiPP precursor
                     peptides by creating a Lys-to-Trp crosslink; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0031179 - peptide modification [Evidence
                     IEA];
                     GO_process: GO:0046500 - S-adenosylmethionine metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KxxxW cyclic peptide radical SAM maturase"
                     /protein_id="HIP6619805.1"
                     /translation="MRTISEDILFRLEKFGGILINKTNFERIELDETEAFFLYLVQNH
                     GIEIATSFFKKEIEMGKLERALSLNIYSDNNIEDSLNNPYETLQNARKHVAKLKKHNI
                     LSFPLELVIYPSMYCDLKCGFCFLANREDRNAKPAKDWERILRQAKDNGVLSVSILGG
                     EPTRYFDIDNLLIACEELKIKTTITTNAQLIKKSTVEILAKSKYITPVLSLQTLDSKL
                     NFELMGVRPDRQIKLAKYFNEVGKKCRINAVYTKQSYEQIIELVDFCIENKIDRFSVA
                     NYSEVTGYTKIKKKYDLADLRRLNEYVTDYITQREANLNFATEGCHLFTAYPELINNS
                     IEFSEFDEMYYGCRAKYTKMEIMSNGDILPCIAFLGVNQTKQNAFEKDLLDVWYDDPL
                     YGGIRSFRTKNSKCLSCGLLKICEGGCYVNLIKEKSPEYFRDSVCQL"
     gene            1991..3082
                     /locus_tag="AC1PJC_000785"
     CDS             1991..3082
                     /locus_tag="AC1PJC_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011681382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIP6619806.1"
                     /translation="MSKRFLNLYMMNIFLSGLPYYFIGVLLLKHLGFSFTEIATLSVI
                     TELCGSVFDIPLSFLSSKFGYKKILILSNLLLTLALSCLLLGQSKIIYISAIFFGLSE
                     SLSSGVLNAYNFELIGNELVYQSFLKYLNTVKYIFIAIITIISPYLLNRNYIYPIIIS
                     IVFVIFSLLNVIQLPEIKNELPNDSRLFSFDDVKTIPWYLLLLGVAFSTLIMISNSYA
                     GIFLNEQGLSLDMLGIVLFMFNIAMALGSYLKMKFEISLLLPVLAIFMFFQTNVFIEI
                     VLFLLMRVLNSSYNNHFYSMFNSSIEKNRAVSWSVYNLFISISFMVSDFLAGIFADNF
                     GIRSNYLLFGIITLFSFLFFSFSNREERT"
     gene            3334..4488
                     /locus_tag="AC1PJC_000786"
     CDS             3334..4488
                     /locus_tag="AC1PJC_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate-binding domain-containing protein"
                     /protein_id="HIP6619807.1"
                     /translation="MKTNLKKLLYSGVTLMSLGVLAACSSTSSSTTTSSSAATSQTSV
                     ATTSNNSTSSDSSSSSIDWSALPTTEVTLSNDGLKITEGGTYILTGSTTAGVTVETDA
                     NVRIILAGAEISSSDTAAINVINADNVELEIKDGTTNTVKDSSNHTDTNIEGAIHVEA
                     DLTITGNGSLTVEGNFQDGIVSTDDLVIDAGNITVTAVDDGIRGKDSLTINGGTITVT
                     AGGDGIKSTNDTDTTKGYTTITGGEITVKAGDDGIKAETALTIDGGTITVSESAEALE
                     GTNITINGGTLDVYGSDDAINAASTTSSDIFIKVTGGDLKVAVGSGDTDAFDANGDIY
                     ISGGTIDVTAQSAFDFDGTAELTGGTVTVNGEQITQITATGPGAGGHGGW"
     gene            complement(4524..5183)
                     /locus_tag="AC1PJC_000787"
     CDS             complement(4524..5183)
                     /locus_tag="AC1PJC_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HIP6619808.1"
                     /translation="MEFDLFLMICNYVGTIAFAVSGAVKGFKKKLDIFGISLLGIITA
                     VGGGIIRDTMANRIPTALTDPTAIYLSLGVAISMYLIVINLKQDKPLDKKMIHFLSQT
                     NLIFDAIGLAIFALIGASTGISLQLNALTSGILAALTGVGGGIARDLLVNETPIVLKE
                     DVYAVLAFFSGVLYHLCVVNWKLPQIPTFITIFTISLVIRLLVIKYKINLPNMESKRK
                     V"
     gene            5416..6384
                     /locus_tag="AC1PJC_000788"
     CDS             5416..6384
                     /locus_tag="AC1PJC_000788"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000258167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HIP6619809.1"
                     /translation="MVSITKEQHLDMFLKMQQIRDVDMKLNKLVRRGFVQGMTHFSVG
                     EEAAAVGPIAGLTDEDIIFSHHRGHGHVIAKGIDINGMMAELAGKATGTSKGRGGSMH
                     LANVEKGNFGSNGIVGGGYALAVGAALTQQYLGTDNIVIAFSGDSATNEGSFHESMNL
                     AAVWNLPVIFFITNNRYGISTDISYSTKIPHLYQRAAAYGIPGHYVEDGNDVIAVYEK
                     MQEVIEYVRAGNGPAMVEVESYRWFGHSTADAGVYRTKEEVNEWKAKDPLKKYRKYLT
                     ENKIATDEELDAIEAQVAEQVEASVKFAQESPDPDISVAYEDVFVD"
     gene            6773..7768
                     /locus_tag="AC1PJC_000789"
     CDS             6773..7768
                     /locus_tag="AC1PJC_000789"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HIP6619810.1"
                     /translation="MAETKVMALREAINLAQSEEMRKDEKVFLMGEDVGIYGGDFGTS
                     VGMLDEFGPKRVRDTPISEAAIAGSAVGAAQTGLRPIVDLTFMDFITIALDAIVNQAA
                     KTNYMFGGGLKTPVTFRVASGSGIGSAAQHSQSLEAWLTHIPGIKVVAPGTANDAKGL
                     LKSSILDNNPVIFLEPKALYGKKEEVNLDPDFYIPLGKGEIKREGTDVTIISYGRMLE
                     RALKAAEEVAAEGISVEVVDPRTLIPLDKELIIESVKKTGKVILVNDAYKTGGFIGEI
                     ASIITESEAFDYLDAPIIRIASDDVPVPYANILENAVLPNVEKIKAAIYKQVNKG"
     gene            8099..9487
                     /locus_tag="AC1PJC_000790"
     CDS             8099..9487
                     /locus_tag="AC1PJC_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002885106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006086 - pyruvate decarboxylation to
                     acetyl-CoA [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase"
                     /protein_id="HIP6619811.1"
                     /translation="MAIEIIMPKLGVDMQEGEIIEWKKQEGDFVNEGDVILEMMSDKT
                     SMELEAEESGVLLKIVHGNGATVPVTEVIAYIGAEGETVEVGASAAPAVEPAAAIEEV
                     PAGRTPVIVAPATVAKPQGGGKVRATPAARKLARELGIDLGLVPGTGANGRVHKVDVE
                     DFKGAAPKATPLAARIAADQGVDLSTLTGSGVNGKIVKNDVLAVLAPAAVETAAPAPK
                     AEEKPAKELPEGVEIIKMSPMRKAISKGMVNSYLTAPTFTLNYDIDMTNLMALRKQVL
                     EPIMNKTGLKVTFTDLIGLAVVRTLMKEEHRYMNASLINDAQEIELHKFVNLGIAVGL
                     DDGLVVPVVHGADKMSLSDFVVASKDVIKKAQSGKLKGAEMSGSTFSITNLGMFGTKT
                     FNPIINQPNSAILGVASTVQTPVVIDGEIKIRPIMALCLTIDHRIIDGMNGAKFMVDL
                     KNLLENPLELLI"
     gene            9757..11517
                     /gene="lpdA"
                     /locus_tag="AC1PJC_000791"
     CDS             9757..11517
                     /gene="lpdA"
                     /locus_tag="AC1PJC_000791"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002984864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     (NADH) activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HIP6619812.1"
                     /translation="MAIEIIMPKLGVDMQEGEIIEWKKQEGDFVNEGDVILEMMSDKT
                     SMELEAEESGVLLKIVHGNGATVPVTEVIAYLGAEGETVEVGSTPAPAEVAQATADLQ
                     AAGLEVPAAPAAAPQAPKAELAADEYDMVVVGGGPAGYYAAIRGAQLGGKIAIVEKSE
                     FGGTCLNKGCIPTKTYLKNAEILDGLKIAAERGINLASTNYTVDMDKTVDFKNKVVKT
                     LTGGVQGLLKANKVTIFNGLGQVNPDKTVVIGDKVIKGRSIILATGSKVSRINIPGID
                     SKLVLTSDDILDLREIPKSLTVMGGGVVGVELGLVYASYGTEVTVVEMADRIIPGMDR
                     EVSVELQKVLSKKGMKFLTSVGVSEIVEANNQLTIKLNDGSEIVSEKALLSIGRVPQL
                     AGLENLNLELDRGRIKVNEYQETSIPGIYAPGDVNGTKMLAHAAYRMGEVAAENAIHG
                     NHHKAKLDFTPAAVYTHPEIAMVGLTEDQAIEKYGKENILIGRNSFTGNGRAIASNEA
                     HGFVKVIAEKKYHEILGVHIIGPVAAEMINEAATIMESELTVDDVAASIHGHPTFSEV
                     MYEAFLDVLGVAIHNPPKRK"
     gene            11865..12710
                     /locus_tag="AC1PJC_000792"
     CDS             11865..12710
                     /locus_tag="AC1PJC_000792"
                     /EC_number="3.-.-.-"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HIP6619813.1"
                     /translation="MRKIIFLDVDGTLVDYHNRIPESAIRAIRQARENGHLVYVCTGR
                     SRAEMQPELWEIGLDGMIGGNGSYVEHQGQVIMHQLLSEEDSRAIVDWLHERGLEFYL
                     ESNNGLFASENFRERARETLRIYSMNKGKTAEEVATQEVDDVMHGMIFDGQLYRNDLN
                     KVSFVLDSYQDHLDSKEAFPQLVANTWGGRGESALFGDLGVKDIDKAHAISVLLDYLG
                     ANQADTIAFGDAKIDISMLDYCAVGVAMGNGGAEILAMADMITDDVEEDGLYNAFERL
                     GLLDK"
     gene            12889..13722
                     /gene="licT"
                     /locus_tag="AC1PJC_000793"
     CDS             12889..13722
                     /gene="licT"
                     /locus_tag="AC1PJC_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator LicT"
                     /protein_id="HIP6619814.1"
                     /translation="MQIEKVYNNNVIQAIDQQGRELIVMGKGLGFQKKAEEELDTSKI
                     EKTFVLQNDYQQSDLSSLYLQMESSEVEVVNAIINRAEETLEVQFDLSLYLALADHLH
                     FVFQRCREGIFIENPLSWEVRKFYPKEYQIGLEALQLVQERLGLELGKGEASSIALHL
                     VNAQKNGAFGKETQTISKIVTQILDIVRLHFGSVTYEEDTSYHRFVTHIQYFAQRVAN
                     GVVEGVNDAFLYEQVMANYPDSFACTTKIRQHIAEVYHFEMSKDEQVYLTIHIQRLKT
                     S"
     gene            13924..15834
                     /locus_tag="AC1PJC_000794"
     CDS             13924..15834
                     /locus_tag="AC1PJC_000794"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_function: GO:0015573 - beta-glucoside transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0015759 - beta-glucoside transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-glucoside-specific PTS transporter subunit
                     IIABC"
                     /protein_id="HIP6619815.1"
                     /translation="MAKDYTDLATDIVAHVGGKENISSLKHCVTRLRFGLKDESKADT
                     DYLKARDGVVTVVQAGGQYQVVIGNHVPDVYAAVQKVAGISGDGALDIDEGDGPKGNL
                     FDRFVDLVSGVFQPSLGVLAAAGIIKGLVSILAATMGLNNDNSALYAILNTAGDGFFQ
                     FLPIVLAFNAARKFRMNEFTGMAIAMALVYPTLPGTFATLKEAGLNNVFGIPFVLPAA
                     GSYLQTVMPVLLAVWIASHIEKFMKKITPDVVKVFIVPFVTILISVPLTFLVVGPVAN
                     YASDLLSAGFTAVMGFSPLLYGILLGALWQVMVMFGLHWAVVPLAILQFSQNGWSNIL
                     LAAALPNFTQTGVLLAIMMKTKESKVKSVAMPAFISSIFGVTEPAIYGITLPMKTPFY
                     ISCAVSAVIGAGLSFFDLKNYAMGALGIFMYPGYVSPELGVTPMWIMMGFSLAAVVLS
                     FAIQMALPVPYLYGEPTEKKSVEETKESVPELKEIKQEIIASPLIGKVVKLEDVPDAV
                     FASGAMGKGIAIDPLDGILVSPAKAEITLVFPTKHAIGLRTENGAELLIHIGMDTVSL
                     AGKGFESFVQVGDQVEAGQKLLEFDLHQIKAADLPVITPIIVTNTADYEDILVTQESQ
                     INSGDYLLTTVK"
     gene            16028..17713
                     /locus_tag="AC1PJC_000795"
     CDS             16028..17713
                     /locus_tag="AC1PJC_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018373372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase family protein"
                     /protein_id="HIP6619816.1"
                     /translation="MKKIAYFLLSLLSLSLFVACGQSKEVTNTLFKNDITKTISSGEV
                     KGKKDSTTATIEWLGIPYAAEPVGELRWKAPQPIEKWEGSFDATEIGSPFIQISKGEV
                     IGSEGALNLDVVRPDNTEANLPVIVFLHGGNNQTGHAQEIKGSGFVNDINAVYVSINY
                     RLGALGFNPLEALKTGTDEENSGNYTLLDIAAALDWVEENIEVFGGDKDNVTLAGFSA
                     GGRDVMATLISPLFKDKYDKAISFSGGMTLADETDSQDIFATAIAPLVVEDGIKSTEL
                     EAKEWLLSNNRQVADYLYGLPAERLASLMGNAGIRMSVFPHLYKDGVVIPKEGFDTSN
                     YNDVPLLLITGTSEFSLFTAFDPYFANSVTDGSLFSDADKLKEFIFTESYGSALYRLS
                     NTVDSARKLQGTYKSPIYIGEISYGDNTETAPKTAQLFGAFHGVFEPLLQQPSNYATF
                     IGEDFNSEGAKQLSQQFKAYLKGFITSSNPEGEKLPQWEEWTADGSQVMKFDASLEKA
                     EIEMGEDSQTTEDIVANLRADSTLSADKKQVLIDNVLNGRWFSQPLDGLKVNE"
     gene            complement(17827..18156)
                     /locus_tag="AC1PJC_000796"
     CDS             complement(17827..18156)
                     /locus_tag="AC1PJC_000796"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative quinol monooxygenase"
                     /protein_id="HIP6619817.1"
                     /translation="MITMHLYYTGPADNARAFAQEMEASGISDRIRQQAGNTRYQYFA
                     PLDDPHSILLVDSWTDQTALDIHHASPMMQEILDLRSKYQLTVTAERYQSDEAGIPER
                     DKDFLQR"
     gene            complement(18169..19083)
                     /locus_tag="AC1PJC_000797"
     CDS             complement(18169..19083)
                     /locus_tag="AC1PJC_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIP6619818.1"
                     /translation="MQPPLTDKQFKHTIDYDSRLLPYKYYHTCVMDGIPDILFHWHNE
                     FEINYVYGGTARYHIDYDYFNSQAGDIILIRPNAAHSIHPIEQRGHETDTLLFHLDML
                     GASHLDQTSMLYLQPLQTDVFKCIPRIQPQDPGYTEIRQCLLTIFELVRHQPPYFELP
                     LKSRLFDFFYLLYRYHYIVRKNTDDMYRKNEKLRLLIEHIQQHYAENLTIEQLAEQMG
                     YTKTHFMTIFKQQTGTSCMEFIIQVRLRAATELLTNTLKPVLEIATEVGFNNLSNFNR
                     QFKQYYHTTPSSYRKQLRKNRTYTNFNK"
     gene            19193..20674
                     /locus_tag="AC1PJC_000798"
     CDS             19193..20674
                     /locus_tag="AC1PJC_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 1 glycosylhydrolase"
                     /protein_id="HIP6619819.1"
                     /translation="MSRFPKNFLWGGAIAANQAEGAYNLDGRGLVQTDVTTGGTVNSP
                     RYTTYIDKDGKPGKYASMGHAGGHLPEGATYAVLEDHYYPNHKAVDFYHRYKEDIKLF
                     AEMGYSVFRLSISWARIFPNGDDAEPNQAGLDFYRSVFEECRKYGIEPLVSIWHFDTP
                     LSLEQRYGGWTNRKLIDFYVRYAETIFNEYKGMVKYWITFNEINNTIMFLDMFSEPKD
                     SDYQDAYQHLHHQFVASAKAVKLGHQIDPNYRFGNMICGITFYPGTCDPADILENQHK
                     WEQNIFYCSDAQAKGRYGSYANRLWKEHNVVLQMEEGDLEILAEGKVDMYTFSYYMST
                     VVTTHKVEDTVSGNFSIGAKNPYLTYSDWGWAQDPTGLQYYLEKIYDRYEIPMMIVEN
                     GLGALDTVEEDGSIHDGYRIDYHRAHVNAMADAIANGVDLIGYTTWGCIDLVSAGTGE
                     MRKRYGFIYVDMDDAGNGTLARTPKDSFYWYKKVIASNGEDVE"
     gene            20913..21296
                     /locus_tag="AC1PJC_000799"
     CDS             20913..21296
                     /locus_tag="AC1PJC_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002962841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HIP6619820.1"
                     /translation="MKIEHVAIYTQDLEGMRNFFENYFNATSNQLYHNLKTSFKSYFL
                     TFEDGARLEIMTRDDVVDKPSQLNYLGLIHLAFSLGSEEAVDELTERLVAAGYLLLNG
                     PRITGDGYYESCLLGFDDIQIELTV"
     gene            21591..23024
                     /locus_tag="AC1PJC_000800"
     CDS             21591..23024
                     /locus_tag="AC1PJC_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019320104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HIP6619821.1"
                     /translation="MSKLPKNFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHGVP
                     REITAGVLEGKYYPNHEAIDFYHRYKEDIALFAEMGFKCFRTSIAWTRIFPKGDELEP
                     NEAGLQFYDDLFDECLKYGIEPVVTLSHFELPYHLVTEYGGFRNRQTINFFVRFAETC
                     FRRYKDKVKYWMTFNEINNQANYQEDFAPFTNSGIVYQEGENREAVMYQAAHYELVAS
                     ARAVKIGHEINPDFQIGCMIAMCPIYPATCKPSDILMAQKAMQKRYYFADVHVHGFYP
                     EHILRYWERKGISVDFTEEDREDLLEGTVDYIGFSYYMSFAIDSHRENNPHYDYLETE
                     DLVKNTYVKASDWEWQIDPEGLRYALNWFTDMYHLPLFIVENGFGAIDQVEEDGMVHD
                     DYRIDYLGAHIKEFIKAVDEDGVDLMGYTPWGCIDLVSAGTGEMRKRYGFIYVDKDDE
                     GNGSYARSPKRSFAWYKNVITTNGEEV"
     gene            23105..23344
                     /locus_tag="AC1PJC_000801"
     CDS             23105..23344
                     /locus_tag="AC1PJC_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009568309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051119 - sugar transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SemiSWEET transporter"
                     /protein_id="HIP6619822.1"
                     /translation="MVGFIAACLTTFGFVPQVIKVVKTKDTESISLGMYMMSVTGMSL
                     WLFHGIIQGDTALIIANSLSVTLAGIILVYKLVYK"
     gene            23568..23906
                     /locus_tag="AC1PJC_000802"
     CDS             23568..23906
                     /locus_tag="AC1PJC_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619823.1"
                     /translation="MESIVGIVVIVVVTVVLVYLLTNMWKIRAASVGQTDDTTLYFVR
                     FKGVNPPDLANSSVFNQVAKIKCAKGDTYQVTSTVNDVKLRDVIMDEFQLKSSEVVVY
                     YPPRLFFYAS"
     gene            24084..24398
                     /locus_tag="AC1PJC_000803"
     CDS             24084..24398
                     /locus_tag="AC1PJC_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003037418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS cellobiose transporter subunit IIB"
                     /protein_id="HIP6619824.1"
                     /translation="MVKALIICAGGMSSSLIAKKTQTLLEEQGHKVEMNAVGVPEGGK
                     KINAAEYDLYLISPQTKMHFKQFEEAGKKVGKPIVQIPPQAYIPIPMGIEKMAKLVLD
                     NI"
     gene            24445..26418
                     /locus_tag="AC1PJC_000804"
     CDS             24445..26418
                     /locus_tag="AC1PJC_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HIP6619825.1"
                     /translation="MLSTKEKMILQYLYQHQNVFSTSKVLAEHLSYTDRTIRTYIKKM
                     ASEISEGETGFAILSKQGYGYQLRISDEEKYHRFLSENQLILGVDYSDAENRHKQILN
                     KLIFEEECILFDDLADQLFVSRSTLSHDFKHIREHLASYGLSIESKPYKGVYVVGEER
                     QKRHFIMDYFFSEHFYQNIHHFLSNDKSLALPLSFEELTIVVLDECRDSQLKLSDYII
                     QNLVIHLGLAIQRYQKGFTISPVTIDKEKYTEELAVATKIARRLSHRLEPQNRFPEEE
                     VVYIALHLISKTQLEVEKSSDRLLLRQALFEVLGRYDDEYGYQFSHDFSLIEGLLTHL
                     EVLVERLRHNLHIDNPLLDDIKTTYHDIFDLTQSLMAELSVFHSYSLSESEIAYVALH
                     LMASLERQKEKYKLNVLVICATGYGSAQMLKNRIKNELGQQVSISDVIGYYDLDNQKL
                     QGIDVIMSTIDLSGLVFKVPVITVSVFLTDQEVKEVKQRLADLRPSLQKPQVVERESN
                     LEKYFDQYFSEQRFLVVESAEKEMLLKQMILQLESEGLGNHQEFYKLIEARESLSTLV
                     FDKDIAVPHPLKPISEKHMISVAVIKNGLYWEEGYGQIRLVFLVSPSIYTNEGLSTIT
                     NRLVDLVDLPEVKKDIINSPDFETFKHVFLQRE"
     gene            26429..26743
                     /locus_tag="AC1PJC_000805"
     CDS             26429..26743
                     /locus_tag="AC1PJC_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018380105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS cellobiose transporter subunit IIA"
                     /protein_id="HIP6619826.1"
                     /translation="MNTEELQMAAFGIILSSGNARSVIHEAFAAMREGDYDKAEELLE
                     AANADMLEAHHSQTGLLQEYASGTEVKVEIIMVHAQDHLMTTMTLREVALEMLALYRK
                     VG"
     gene            26758..>27268
                     /locus_tag="AC1PJC_000806"
     CDS             26758..>27268
                     /locus_tag="AC1PJC_000806"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619827.1"
                     /translation="MSKGMASKKLQKTPEQLKQESKRKSQLFNRYMLFRYSLAVFFFA
                     NLYWLLVQLFQPSLYLILPSLMLIAIIIATAEQFKLYSAEESRLTKTEFVLRAQAILQ
                     GLIVVLVILGHISTLFPTFSNHTSAKLFVIGLQLLGIALVVLNLKRLEQVKQNTDKYY
                     LRFQIIRKYL"
BASE COUNT         8353 a         4731 c         6051 g         8133 t
ORIGIN      
        1 ttagatgaat taactgacta tttatttagt gtggaatact ggggctatta tgaacttttg
       61 attttcatga atactttaga tgtcttgaaa tatgatgttt tcatagtatt agcgagggaa
      121 atgtctagac ggtcagactt ttttaaagaa atccctaata atcgtcgtct tatttctacg
      181 atgttactta atgcctatat cacctgtatc gaacggcaaa atcttatgga tgctttgtat
      241 tttgagaagc aattgaaaca gtgctttttt atcgaaacag aaatttatga gagacttgtt
      301 tttctctatg ctcaaaatct ttatcgctat cgcaaaactg gaagtaaatt tgcgattgtg
      361 gaaatgagga agtgtattgg agcgatgaaa ttagcaggta gtgatcatgt ggcacagatt
      421 tatgaagaac atttgaaaaa aattttaaca gaaaatagtt aattggcata tatgggaaca
      481 ttttattgta attgatttaa aagaatatac ttacagtgtc acgttcgaaa ggagtagcaa
      541 ttatgtcaaa agaacttgaa aaagtccttg agtctagtgc tatggcaaaa ggcgacggtt
      601 ggcatgtata aagtaattta tacataggtt aagcagaggt tattttcctc tgctttttta
      661 aagaggtgtt caagatgagg acaatttcag aagatatttt atttagatta gaaaagtttg
      721 gtggaatttt aataaacaaa acaaattttg aaagaataga gttagatgag actgaggctt
      781 tctttctata tttagttcaa aatcatggta ttgaaattgc aacttctttt tttaaaaaag
      841 aaattgagat ggggaaacta gagagagcat tatcattaaa tatctattct gataataata
      901 ttgaggattc attgaacaat ccttacgaga ctcttcaaaa tgcgagaaag catgtagcaa
      961 aattaaaaaa acataacata ctgagttttc cgcttgaact agtaatatac cccagtatgt
     1021 actgtgattt aaaatgtggt ttttgttttt tagcaaatcg tgaagataga aatgccaaac
     1081 ctgctaaaga ttgggaaaga attttgcgcc aagcaaaaga taatggagtg ttaagtgttt
     1141 caattttagg aggggaaccg actagatatt ttgatattga taatttgttg atagcttgtg
     1201 aagaactaaa gataaagact actataacaa ctaatgccca attaataaag aaaagtacag
     1261 tagaaattct agctaaatct aaatatatta caccggtttt atctttgcag actttagatt
     1321 ctaaattaaa ttttgaatta atgggggtga gacctgatag acaaataaaa ttagcgaagt
     1381 actttaatga ggttggaaaa aaatgtagaa ttaatgcagt gtatacaaag caaagctatg
     1441 agcaaattat agaattggtt gatttttgta tagagaataa aatagatagg ttttcagtag
     1501 ctaattattc tgaggtaaca ggatatacga aaataaagaa aaaatacgat ttggctgatt
     1561 tgagaaggtt gaatgagtat gttacagatt atataactca acgtgaagca aatttaaatt
     1621 ttgctactga gggatgtcat cttttcaccg cttatccaga gttgataaat aattcaattg
     1681 aattttcaga gtttgacgaa atgtattatg gatgtcgtgc aaaatatact aagatggaaa
     1741 taatgtctaa tggggatatc ttgccctgca ttgctttttt aggagttaat caaactaagc
     1801 agaatgcctt tgaaaaagat ttgttagatg tttggtatga tgatccgttg tatggaggga
     1861 ttcgttcttt tagaacgaag aattctaagt gtttatcttg tggattgtta aaaatttgcg
     1921 agggtggctg ctatgttaac ttgatcaagg agaagagtcc agaatatttt agagactcag
     1981 tttgccaatt atgagtaaaa gatttttgaa cttatacatg atgaatatat ttttgtccgg
     2041 attgccctac tattttatag gtgtattgct cttaaagcat ctgggcttct ctttcacaga
     2101 aatagctact ttatcagtga ttactgagtt atgcggctca gtttttgata ttcctttaag
     2161 ttttctttca agtaagtttg gctataagaa aattttgatt ttatcaaatt tgttattaac
     2221 tttagcccta tcttgcttac tgttaggaca atcaaaaata atatatattt cagcgatatt
     2281 ttttggcttg tcagaatcct tatcttcagg cgttcttaat gcttataatt ttgaattaat
     2341 tggcaacgag ctagtatatc aatctttttt gaaatacctc aatacggtaa aatacatttt
     2401 tatagcgatt attacaatta tatctcccta tctactgaat aggaattata tttatccgat
     2461 tattatttcg attgtatttg tcattttcag cctcttaaat gtgatacaat tacctgaaat
     2521 aaaaaatgaa ttacctaatg attcaagact ttttagcttt gatgatgtta aaacgattcc
     2581 atggtattta ctactgttag gagtagcatt ctcaactcta attatgatca gcaattccta
     2641 tgcaggcatt tttctaaatg aacagggact ttcactagat atgttgggca tagtactatt
     2701 catgtttaat atagctatgg ctttggggag ttacctaaaa atgaagtttg aaatcagttt
     2761 attactacca gtgctagcta tttttatgtt ttttcaaacg aatgtattca tagaaattgt
     2821 attattttta ttgatgcgtg ttctcaattc aagttataat aatcattttt attctatgtt
     2881 taatagttcg atagaaaaaa atagagcagt atcatggtcg gtctataatt tatttatttc
     2941 cattagtttt atggtatcgg actttctagc tggtattttc gcagataact ttggtataag
     3001 gagtaattat ttactatttg gcatcataac tttgttttcc tttttattct tttcattttc
     3061 aaatagagag gaaaggacgt aagttcaaat tcaggcagtc tacatcaggg gacccaattt
     3121 taatagggta ttccttgagg ggaaggggaa tcatggaacg aatgttgaat ggacggtagt
     3181 ggaaggagcc taggtagtac aagcatactg gtaaaaatca gactttaagt tttcttttgg
     3241 caatctttaa tctttctttt aggaaggaaa ggtaaactgg gagcatatca ggaagggata
     3301 cgacttccta aagaaagaaa aggaatcttt attatgaaaa caaatcttaa aaaattactt
     3361 tactctggtg ttactcttat gagtcttggt gtcttagcag catgttcatc tacttcaagt
     3421 tcaacgacga cttcaagttc agcagcaact agtcagacaa gtgtagcgac aacttcaaat
     3481 aatagcactt catcagattc gagctcgtca tctattgact ggtcagccct tccaacgaca
     3541 gaagtgacgc tttcaaatga tggcttgaaa attactgagg gaggaaccta tattttgact
     3601 ggttcaacaa cagctggtgt aacggttgaa acagatgcca atgttcgcat cattctagca
     3661 ggtgctgaga tttcaagttc agatactgca gcaatcaatg ttattaatgc tgataatgtt
     3721 gaattggaaa tcaaagatgg tacgacgaat acagtgaaag atagcagcaa tcatacagac
     3781 accaatattg agggggctat ccatgttgaa gcagatttga ccatcactgg taatggtagc
     3841 ttgacagtag aaggaaactt ccaagatggt attgtatcaa ctgatgattt ggttattgat
     3901 gcaggaaata tcactgttac agcagtagat gatggcatcc gtggtaagga ttcattgact
     3961 atcaatggtg gaactatcac cgtaacagca ggtggagatg gtatcaagtc gaccaatgat
     4021 acagatacta ccaaaggtta tacaacaatc acaggtggtg aaattactgt aaaagcaggt
     4081 gatgatggta ttaaagcgga aacagcattg acaattgatg gcggtaccat tacagtatca
     4141 gaatctgctg aggcacttga aggtactaac atcacgatta atggtggtac attagatgtt
     4201 tatggttcag atgatgctat taatgcggca agtacaacgt catcagatat ctttatcaag
     4261 gtaactggcg gtgacttgaa agtggctgta ggtagtgggg atacggatgc ctttgatgct
     4321 aatggagaca tttatatctc cggtggtaca atcgatgtaa cagctcaatc tgcttttgac
     4381 ttcgatggaa ctgctgaatt gacaggaggt actgtgacag ttaacggtga gcagattact
     4441 caaatcactg cgacaggacc aggtgcaggt ggtcacggcg gctggtaatc aataataata
     4501 caaaaaggtc tgagttgacg aactcagacc tttcgtttgc tttccatatt tggaagattg
     4561 attttgtatt taattaccaa taatcgaatg actaaagaaa tggtaaaaat agtgatgaag
     4621 gttggaattt gtggtaattt ccaatttaca acgcaaagat gatagaggac tcctgagaaa
     4681 aatgcaagga cagcatagac atcttcttta agaacaatag gtgtttcatt gacgagtaaa
     4741 tcacgggcga ttccgcctcc gacacctgtc aaagctgcca gaataccact ggttagagcg
     4801 tttagctgga gagagatgcc agtactggct ccaatgaggg cgaagatggc tagaccgatt
     4861 gcatcaaaga taaggtttgt ctgggaaagg aaatgaatca tcttcttatc aagtggtttg
     4921 tcctgcttta gattgataac aatcaagtac atgctaatcg ctactccgag agataaatag
     4981 atggctgtag gatcagtcaa agcagtagga atgcgattgg ccatcgtatc tctaataatt
     5041 cccccaccaa cggcggtaat gatgccgagc aagctaattc caaaaatatc taactttttc
     5101 ttaaatcctt ttacggcccc cgaaacagca aatgcgatag tgcctacgta gttacaaatc
     5161 ataagaaata aatcgaattc cataagaacc tccgtaccta tattaacaga aagaaagacg
     5221 gcgtgcaagc tcattttaaa atttgtgaaa aaagtttcaa acaaggaaaa taaatctttt
     5281 tggaatttgt gaaaaaacgc actaaaccaa ggttttcacg aaaatttctg taaaaagaaa
     5341 acggttcaat tacttgccat ttgtgaaata ttggtctatc atagtacaga aagagaaaaa
     5401 cctttggagg aaattatggt atctatcaca aaagaacaac atttggacat gttcttgaaa
     5461 atgcaacaaa tccgtgatgt tgatatgaaa ttaaacaaat tagtgcgtcg cggtttcgta
     5521 caaggtatga ctcacttctc agtcggtgaa gaagctgcag ctgttggacc tattgctgga
     5581 ttgacagatg aggacatcat cttctcacat caccgtggtc acggtcacgt tattgcaaaa
     5641 ggtattgaca tcaatggcat gatggctgag cttgctggta aggcaactgg tacatcaaaa
     5701 ggtcgtggtg gttctatgca cttggcaaac gttgaaaaag gaaactttgg ttcaaacggt
     5761 atcgtaggtg gtggttatgc ccttgcagtt ggtgcagccc ttacgcaaca ataccttggt
     5821 acagataaca ttgttattgc cttctcaggt gattcagcta ctaacgaagg ttccttccat
     5881 gaatcaatga acttggcggc agtttggaac ttgccagtta tcttcttcat tacaaacaac
     5941 cgttacggta tttcaactga catttcttat tctactaaga ttcctcacct ctaccaacgt
     6001 gctgctgcat acggtattcc aggtcattat gttgaggatg gtaacgacgt tattgccgtt
     6061 tatgaaaaaa tgcaagaagt catcgagtac gttcgtgcag gaaatggtcc tgccatggtc
     6121 gaagttgaat cgtaccgctg gtttggtcac tcaactgccg atgcaggtgt ttaccgtact
     6181 aaagaagaag tcaatgagtg gaaagcaaaa gacccactta agaaataccg caaatacttg
     6241 acagaaaaca agattgcgac agacgaagaa ttggatgcca tcgaagcaca agtcgcagaa
     6301 caagtagaag catctgtgaa attcgcacaa gaaagcccag atccagacat ctcagtagct
     6361 tatgaggatg tgtttgtaga ctagggtgtg aggacgttaa agaggcaaag aaaaattagg
     6421 gagtcagcta gtgatgtgga catcactaat ggctcatcta tttttccaag cctctagtct
     6481 gaacccaact actaacgtaa gaagtttgac taagctctaa agagcaagtc aaactacggt
     6541 agccactatg gtggactacc tacttacctc actaacttcg cctattcagc aatatcggct
     6601 gaatagtctc cgtgtcgtaa gtgatgtgat cagtttgact aagttctgaa gagcaagtca
     6661 aactagggta gctcgagcag ctatgacgct tgattacaat gaagtaattg attagttttc
     6721 tatattttac ttgttacagt aaagataaat tgatataaat taggagtaaa aaatggctga
     6781 aacaaaagta atggccttgc gtgaagcgat taacttggct caaagcgaag aaatgcgtaa
     6841 ggatgaaaaa gtattcttga tgggtgaaga cgtcggtatc tacggcggtg acttcggtac
     6901 atctgttggt atgttggacg agtttggtcc aaaacgcgtt cgcgacacgc ctatctctga
     6961 ggcagcaatc gctggttctg cggttggtgc ggctcaaaca ggtcttcgtc caatcgttga
     7021 cttgactttc atggacttca tcacaattgc ccttgatgca attgttaacc aggctgccaa
     7081 aaccaactac atgtttggcg gtggtttgaa aacacctgta actttccgtg tggcatctgg
     7141 ttcaggtatc ggttcagcgg cacagcactc acaatctctt gaagcttggt tgactcacat
     7201 cccaggtatc aaagttgttg caccaggtac agctaacgat gcaaaaggtc tcttgaaatc
     7261 atctatcctt gacaataacc cagttatctt cttggagcca aaagctcttt acggcaaaaa
     7321 agaagaagtg aacttggacc cagatttcta cattccactt ggtaaaggtg aaatcaaacg
     7381 tgaaggtaca gatgtaacca tcatttcata cggtcgtatg ttggaacgtg ccttgaaagc
     7441 ggctgaagaa gtggctgctg aaggcatcag cgttgaagtg gttgacccac gtactcttat
     7501 cccattggat aaagaattga tcatcgaatc tgtgaagaaa actggtaagg ttatcttggt
     7561 taacgatgct tacaaaacag gtggtttcat cggtgaaatc gcatcaatca tcacagaaag
     7621 cgaagccttt gactacttgg atgcaccaat catccgtatc gcttcagacg atgtaccagt
     7681 tccttacgca aacattcttg aaaacgcagt attgccaaac gtagagaaaa tcaaagcggc
     7741 aatctacaag caagtaaaca agggttaatc ttatcgtcat tcgcttatct tttctggctg
     7801 tattgatttg gcttgcctaa ggtcagttat gcctgcacca aattgacttg ccagaaaagc
     7861 aatcggaaag acgataaccc taatatgcta gaaataaagt gttctagcat gactaagaat
     7921 gcttggaaaa gaattaagcc acttcgatta tcgaagtctg gtttggttct tgacaaggta
     7981 agaaactgaa agaaaggaat tgaacccgtc cggaaaactc ggaaaaaaga taaatcgtta
     8041 cgaaaatgag gattttctat ttttcaatcg ttttctgttc ggacttggta tcttaataat
     8101 ggctattgaa atcattatgc ctaagctcgg tgtggacatg caagaaggtg aaatcatcga
     8161 gtggaaaaaa caagagggcg atttcgtcaa tgaaggcgac gtcatcttgg aaatgatgtc
     8221 tgacaagacc agcatggagc tggaagcaga agagtcaggc gtcctattga aaattgttca
     8281 cggaaacggt gctaccgttc ctgtaacaga agttattgcc tacatcggtg ctgaaggtga
     8341 gacggttgaa gtcggcgctt cagctgcacc tgctgttgaa ccagcagcgg ctattgaaga
     8401 agtacctgca ggtcgtacgc cagtaatcgt tgctcctgca actgttgcca aaccacaagg
     8461 tggtggcaag gttcgtgcga ctccagcagc acgtaaattg gcgcgtgagc ttggaatcga
     8521 cttgggtctt gttccaggaa caggtgctaa cggtcgtgtc cacaaggttg acgtcgaaga
     8581 cttcaaggga gcagctccaa aagcaactcc gcttgcagcc cgtattgcag cagaccaagg
     8641 tgttgacttg tcaaccctta caggttcagg tgtcaacggt aagattgtca agaacgacgt
     8701 tcttgcagta cttgctcctg cagctgtaga gactgctgct ccagcaccga aagcagaaga
     8761 aaaaccagct aaagaattgc cagaaggcgt tgaaatcatc aagatgagcc caatgcgtaa
     8821 ggcgatctca aaaggtatgg tcaactctta cttgactgct ccgacattta cacttaacta
     8881 cgatattgac atgactaacc tcatggcact tcgtaagcaa gtccttgagc caatcatgaa
     8941 caagactggt ttgaaagtaa cctttacaga cttgatcggt cttgcggttg ttcgtacttt
     9001 gatgaaagaa gaacaccgct acatgaacgc atctttgatt aacgatgctc aagaaatcga
     9061 attacacaag ttcgtcaacc ttggtatcgc agtgggtcta gatgatggct tggtggttcc
     9121 agttgttcac ggcgcagata agatgagctt gtctgacttt gtggtggctt cgaaagatgt
     9181 catcaagaag gctcaatctg gtaagttgaa gggggctgaa atgtcaggtt ctaccttctc
     9241 tatcaccaac ttgggtatgt ttggtactaa aacctttaac ccaatcatca accagccaaa
     9301 ctcagcaatc cttggtgtag catcaactgt tcaaacacca gttgttattg acggcgaaat
     9361 caaaatccgt ccaatcatgg cactctgctt gaccatcgac caccgtatca ttgatggtat
     9421 gaatggtgct aagttcatgg ttgacttgaa gaacttgctg gaaaacccat tagaattgtt
     9481 gatctgagat aagatgcaaa aggcgttaag aaaaacgtat gaaaatagga aatcaacgat
     9541 gtgccttgag gcacgaggcg atttatcttt ttcaataggt ttttagcctg tgctcaattt
     9601 ggtaaagaga aaaaataaag aaaggatgta gaacgagttc gtgacatttg aacacgaact
     9661 aaatgcttcg gaatttagat agtccgccta ggatgcaagc atcctacgtt ggactcctaa
     9721 aattctgtcg catttgacgt tctttgtatc ataactatgg caattgaaat tattatgccg
     9781 aaacttggtg tagatatgca agagggcgaa atcatcgagt ggaaaaaaca agagggtgat
     9841 tttgtcaacg aaggtgatgt tatcttggag atgatgtcag acaagacaag tatggaattg
     9901 gaagcagaag aatcaggtgt tcttttgaaa atcgttcacg gtaatggtgc aactgttcct
     9961 gtaacagaag tcattgctta ccttggtgca gaaggtgaaa cagttgaagt aggtagcaca
    10021 cctgctccag ctgaggttgc acaagcaact gccgacttgc aagcagctgg tttggaagtg
    10081 cctgcagctc ctgcagcagc tccacaagct cctaaggctg aattggcagc tgacgagtac
    10141 gacatggttg ttgtcggtgg tggtcctgct ggttactatg cagctattcg tggtgctcaa
    10201 ttaggcggta aaatcgctat cgttgagaaa tcagaattcg gtggtacttg cttgaacaag
    10261 ggttgtatcc caactaagac ctaccttaaa aacgctgaaa ttcttgacgg cttgaagatt
    10321 gcagctgagc gtggtatcaa ccttgcttca acaaactaca ccgttgatat ggacaagaca
    10381 gttgacttca agaacaaggt tgtgaagaca ttgactggtg gcgttcaagg tctcttgaaa
    10441 gctaacaagg taacaatctt caacggtctt ggtcaagtaa atcctgacaa gactgttgtc
    10501 atcggcgaca aggtcatcaa aggtcgtagc atcatccttg caacaggttc taaagtatca
    10561 cgcatcaaca tcccaggtat tgattctaag ttggtattga cttctgatga tatccttgat
    10621 ttgcgtgaaa ttcctaagtc actcactgtt atgggtggtg gcgttgtcgg tgtggaactt
    10681 ggtttggttt acgcatcata cggcacagaa gtaacagttg ttgaaatggc tgaccgtatc
    10741 attccaggta tggatcgcga agtgtctgtt gaattgcaaa aagtcctttc taagaaaggt
    10801 atgaaattct tgacatctgt tggtgtatct gaaatcgtcg aagctaacaa ccaattgacc
    10861 atcaagttga acgacggctc agaaatcgtt tctgaaaaag ccctactttc aatcggacgt
    10921 gtaccacaat tggctggtct tgaaaatctt aaccttgaac tagaccgcgg tcgtatcaag
    10981 gtcaacgagt accaagaaac atctatccca ggtatttacg caccaggtga tgtcaacggt
    11041 actaagatgt tggcacacgc tgcttaccgt atgggtgaag tggcagctga aaatgctatt
    11101 cacggtaacc accacaaggc taaattggac ttcacaccag cagcggttta cacacaccca
    11161 gaaatcgcta tggttggttt gactgaagac caagcaatcg agaaatacgg taaagaaaac
    11221 atccttatcg gtcgcaacag ctttactggt aacggtcgtg ccattgcttc taacgaagct
    11281 cacggtttcg taaaagttat cgctgagaag aaataccatg aaatccttgg tgttcatatc
    11341 atcggtccag ttgcagctga aatgatcaac gaagcagcaa ctatcatgga atctgagttg
    11401 acagttgatg acgtggcagc atcaatccac ggtcatccaa ccttctcaga agttatgtac
    11461 gaagccttcc ttgatgtgct tggtgtggcg attcacaacc caccaaaacg taaataatag
    11521 cattcagttt atcttttatt acttcgttaa ctcgatttgc cgtactctac agaagcgact
    11581 tgcctcgcaa gtcctatttc caacctagaa cagccttgag gctgttctag caacctgcat
    11641 cttttgatgc gaacgcagtt cgccttattt ccaacctcca actatctccc agataattgg
    11701 agctagtact aaaagcaaac tgaaatgcta acatctaaaa gaaagtccat gtggctttct
    11761 ttttttgatg ttcataggat agtatcaatc tttcgcagtt tttgactgtt atttgataga
    11821 aaaacagact atacttgtag tagaaaaaag caaggagaat aaggatgcgc aagattattt
    11881 ttttagatgt ggatggaacc ttggtagact atcacaatcg gattccagaa tcagctattc
    11941 gtgctattcg acaggccaga gagaatgggc acttggtcta tgtctgtact ggtcgcagtc
    12001 gggcagaaat gcagccagaa ctatgggaga ttggtcttga cggaatgatt ggtggcaacg
    12061 gctcttatgt cgagcatcaa ggtcaggtca tcatgcacca gctcctatca gaagaagata
    12121 gccgagcgat tgtggactgg ctccatgaac gcggcttgga attttatctg gaaagcaaca
    12181 atggtctctt tgccagtgag aatttccgtg aacgtgctcg tgaaaccctg cggatttatt
    12241 ccatgaacaa ggggaaaact gcagaagagg tggccactca ggaagtagat gacgttatgc
    12301 acggcatgat ttttgatggt caactctacc gcaatgacct caacaaagtc agttttgtac
    12361 tcgactccta ccaggatcat ttggactcta aagaggcctt tccgcaactg gtcgcaaaca
    12421 cctggggagg tcgcggagag tcagctctct ttggtgactt gggggtgaaa gacatcgaca
    12481 aggcccatgc catttctgtt ttgctggact atttgggtgc taatcaggca gacactatcg
    12541 cctttggtga cgctaaaatt gatatttcca tgctggacta ttgtgcagtt ggagtggcta
    12601 tgggcaatgg cggagcggaa atcttggcta tggcagatat gataacggac gatgtagaag
    12661 aagacggcct ctacaatgcc tttgaaagat tgggactact tgacaagtag ctctcagaat
    12721 aaatcatagt atcccttgca aaaccgctta caatctgata agataagtgt aggattgtta
    12781 ctggtaagca ggcaaaacct aagtagatag tgaagggtct ggcaacagtc gtatttgcta
    12841 tatgcttggg ttctttttta tcagtcgaaa aaagaggcgg taaagtagat gcagattgaa
    12901 aaagtttata acaacaatgt cattcaagca atagatcagc agggccgtga gttgattgtc
    12961 atggggaaag gattaggttt tcagaaaaaa gcagaggaag aattagacac cagcaaaatc
    13021 gagaaaacct ttgtgctaca aaatgactac caacaatcag atttatcgag tctgtacctg
    13081 caaatggaga gcagtgaagt cgaagtagtc aatgccatta tcaatagggc agaagaaact
    13141 ctagaagttc agtttgattt gtctttgtat ctagccttag cagaccattt acattttgta
    13201 tttcagcgat gccgtgaagg tatctttatt gagaacccgc tgtcttggga agtacgtaag
    13261 ttttatccga aggaatacca aattggttta gaagccttgc agttagtgca ggagcgttta
    13321 ggcttggaac taggaaaggg agaggcctcg tctatcgctc tccatctggt aaatgctcag
    13381 aagaatggtg cttttggcaa ggaaacccaa accattagta aaatcgtgac tcagatttta
    13441 gacattgtcc gccttcattt tggtagtgtg acctacgagg aggataccag ttaccaccgc
    13501 tttgtaacac atattcagta ttttgctcaa cgtgtggcca atggtgtggt cgaaggggtc
    13561 aatgatgcat ttttgtacga acaggtgatg gctaactatc ctgattcatt tgcttgtacg
    13621 actaagattc gtcagcatat tgcggaagtt taccattttg aaatgtccaa agatgaacaa
    13681 gtctatttaa ccatccatat ccagcgctta aaaacgagtt agagaaaaat tttaaaaaaa
    13741 acttcagaaa acgcttgcaa aacggtttgc aatgtgttat cataatctca acaaaaggat
    13801 tgttactggt tagcaggcaa aacctaaata tatacaagat actctttttg acgtagttca
    13861 aggggcagtg tttggtatat gtttaggttt ttctgttttt ccagaaaaga aaggagccga
    13921 aaaatggcta aggattatac agatttagct acagatattg tagctcatgt tggtggaaaa
    13981 gaaaacatca gtagtttgaa acactgcgtg actcgtcttc gttttggtct caaggatgag
    14041 agcaaggctg atacagacta cttgaaggcg cgtgatggcg ttgtgacagt agttcaagca
    14101 ggtggtcaat accaagtggt tatcgggaac catgtaccag acgtttatgc ggctgtgcaa
    14161 aaagttgcag ggatttcagg agatggcgcc ttggatattg atgaaggtga cggaccgaag
    14221 ggaaatctgt ttgaccgatt tgttgaccta gtttcaggtg ttttccagcc ttctttagga
    14281 gtgcttgcag ctgcagggat tatcaaagga ttggtatcca tcctagccgc tacaatgggt
    14341 ttgaacaatg ataatagcgc cctatatgct attttaaaca cagctggaga tggattcttc
    14401 caattcttgc caatcgtctt agctttcaat gctgcacgaa aattcagaat gaatgaattt
    14461 actggtatgg caattgctat ggcattggtt tacccaactc tgccagggac atttgcgact
    14521 ctaaaagaag cgggtctaaa taatgttttt ggcataccat ttgtacttcc agcagcaggt
    14581 agctacttgc aaactgtgat gcctgtccta cttgctgtct ggattgcttc tcatattgag
    14641 aaattcatga agaaaattac gcctgacgta gttaaggtct tcattgtacc gtttgtgaca
    14701 attctaattt cagttccatt gacattcttg gttgtaggtc ctgtcgcgaa ctacgcttca
    14761 gatcttttgt ctgcaggctt tactgcggtt atgggcttta gtccactact ttatggtatt
    14821 ctacttggtg ctttatggca agtaatggtt atgttcggac ttcactgggc cgtggtacca
    14881 cttgcaatac ttcagttttc tcaaaacgga tggtcaaata ttttgttagc tgcagcgctt
    14941 ccaaacttta ctcaaactgg tgttcttttg gcaattatga tgaaaaccaa agaatcaaaa
    15001 gtgaagtcag ttgcgatgcc tgcctttatc tcttctatat ttggtgtaac tgagccagca
    15061 atctatggca tcacgcttcc aatgaaaaca ccattctata tttcttgtgc agtgtcagca
    15121 gtaattggtg caggtctctc attctttgat ttgaaaaact atgctatggg tgctctcggt
    15181 atctttatgt atccaggtta tgttagtcct gaactaggtg tgactccaat gtggattatg
    15241 atgggcttct ctttggcggc agtagtttta tccttcgcta tccaaatggc tcttccagtt
    15301 ccttacttat atggagaacc aactgaaaaa aagtccgttg aagaaacaaa ggagtctgtt
    15361 ccagaattaa aagaaattaa acaagaaatt attgctagtc cactaatcgg taaagtagtt
    15421 aaattagaag atgttcctga tgcggtcttt gcttcaggtg ctatggggaa aggaattgct
    15481 atcgatcccc tagatggtat ccttgtttct ccagctaagg ctgaaataac tcttgtattc
    15541 ccaaccaaac atgctattgg tcttcgtact gaaaatgggg cagagcttct catccatatc
    15601 ggtatggaca cagtctcact agctggtaaa ggctttgaat ccttcgtcca agtaggtgac
    15661 caagttgaag caggacaaaa attgctggaa tttgatctcc accaaatcaa agcagctgac
    15721 ctaccggtca tcactccaat tatcgtgacc aatacagctg actatgagga catcttggta
    15781 acccaagaaa gccaaatcaa cagtggtgat tacctgttga caactgtgaa ataattatat
    15841 tttcgtttag aaacaatgaa atatttctac acaaaatagg aaaaagactc tttgtataga
    15901 ttattgtaac aaatctaaat agatgctaat cagaacgtac tttccacgga ttttgcgaat
    15961 atattagtat ttatttagat tttattttga agaaaattta tatatattaa tatgtggagg
    16021 cggataaatg aaaaagattg cttatttttt actgagttta ctgagtttaa gtctatttgt
    16081 tgcttgtgga caaagtaagg aagtaacaaa tacactgttt aagaacgaca tcacgaaaac
    16141 aatcagtagc ggtgaggtaa agggtaaaaa ggatagtacg accgctacga ttgaatggtt
    16201 aggaatcccc tatgcagcag aaccagtagg tgagctacgt tggaaggcgc cacagcctat
    16261 cgaaaaatgg gaaggtagtt ttgatgcaac tgaaatcgga tctcctttta tacaaatctc
    16321 aaaaggggaa gtaatcggtt cagaaggagc gctaaatctt gatgttgtta gacctgataa
    16381 tacggaggct aatctaccag tgattgtttt tctgcatgga ggaaataatc aaacaggtca
    16441 tgcacaagaa atcaaaggaa gtggctttgt aaatgacatc aatgccgttt atgtttcaat
    16501 caattatcgc ttgggcgctc ttggttttaa tccgttggaa gcacttaaga caggaaccga
    16561 tgaagaaaat tctgggaatt atactctctt agacattgcg gcagcattgg attgggtgga
    16621 agaaaacatt gaggtctttg gtggtgataa ggataatgtg accctagcag gcttttcagc
    16681 tggtggtcgt gatgtaatgg caacattaat ttctccacta tttaaagata aatatgataa
    16741 agcaatatca tttagtggag gaatgactct agcagatgaa acggatagtc aagatatttt
    16801 tgcaacggcg atagcaccat tagttgttga agatggaatc aagtccacag aacttgaagc
    16861 aaaagaatgg ttgttatcta acaatcgtca agtagctgat tatctttatg gacttcctgc
    16921 ggagcgtctg gcttcgttga tgggaaatgc tggtattcgt atgtctgtct ttccgcacct
    16981 gtataaagat ggggtagtca ttccgaagga aggatttgat acttcaaatt ataatgatgt
    17041 gcctcttctt ttaataacag gaactagtga attttcttta ttcacagctt tcgatcccta
    17101 ttttgcaaat tctgtgacag atggcagtct attttcagat gctgacaaat taaaagaatt
    17161 tatatttact gaatcatatg gtagtgctct gtatcgtctg tctaacactg tagatagtgc
    17221 tagaaaattg caaggaacat ataaatcacc aatatacatt ggagaaattt cttatggaga
    17281 taatacagag actgctccaa aaacagctca gttgtttggt gcctttcatg gcgtatttga
    17341 acctttactt caacaaccat caaactatgc tactttcatt ggtgaagatt tcaattctga
    17401 aggtgctaaa caactgagcc aacagtttaa agcatatttg aaaggattta tcacaagtag
    17461 taaccctgaa ggagaaaaat taccacaatg ggaagagtgg acagctgacg gcagtcaggt
    17521 aatgaaattt gatgctagtt tagaaaaagc tgaaattgaa atgggtgaag attctcaaac
    17581 tactgaggat attgtcgcga accttcgagc agatagtact ttatctgcag ataaaaaaca
    17641 agttttaatt gacaatgtat tgaacggtcg ttggtttagt caaccattgg atggtttgaa
    17701 agttaatgaa tagtatattt ttgatgtatt gaaaaaatat aaaagtaaaa agcaacacaa
    17761 ggtgttgaca acggtcaaat aaaaaataaa gtggttggca gtgccaatca cttttttgaa
    17821 tcttgtttag cgttgaagaa aatccttatc tcgctcagga atgcccgcct catcactctg
    17881 atagcgttca gcggtgacag ttagctggta cttactgcgt aagtctagga tttcctgcat
    17941 cattggggaa gcatggtgga tgtccaaggc ggtttggtct gtccagctat cgaccaagag
    18001 gatggaatgg ggatcatcga gaggtgcaaa gtattggtaa cgtgtatttc cagcctgctg
    18061 gcgaatgcgg tcggaaatgc cactagcttc catttcctga gcgaaagcac gtgcattgtc
    18121 agctggtcca gtgtagtaga ggtgcatggt aatcatagct ttctccttct atttgttaaa
    18181 attagtatag gtcctattct tccgcaattg cttgcgatag ctgctagggg tggtatggta
    18241 gtattgtttg aactggcggt tgaagttgga caggttatta aagccaactt cggtcgcaat
    18301 ttcaagcaca ggcttgagag tgtttgtcag gagctcggta gctgcccgca gtcggacttg
    18361 gatgataaat tccatacagg aagttcctgt ttgttgcttg aagattgtca taaaatgggt
    18421 ttttgtatag cccatttgct ctgctagctg ctcgatggtg agattttctg cataatgttg
    18481 ttggatgtgt tcaatcaaca accgcagttt ttcatttttc cgatacatat catcggtatt
    18541 ttttcggacg atgtagtggt agcggtagag caggtagaag aagtcaaaga gtcggctctt
    18601 gagaggtagc tcaaagtaag gcggctggtg tctgaccaac tcaaaaatgg tgagcaggca
    18661 ttgtctaatt tctgtgtagc cagggtcttg gggctggatg cgtggaatac acttgaaaac
    18721 atctgtctgt aagggttgca ggtagagcat actggtctga tctaggtgag acgcccccag
    18781 catatccaag tgaaagagaa gggtatccgt ttcgtgcccc cgttgctcaa tcggatgaat
    18841 ggaatgcgca gcattgggtc gaatcaggat aatatcacca gcttgactat tgaaataatc
    18901 atagtcgata tggtaacggg ctgtccctcc gtaaacatag ttgatttcaa attcattgtg
    18961 ccaatgaaag agaatgtcag gaataccatc catgacacag gtatggtaat acttgtaggg
    19021 caacaaacga ctatcgtagt caatggtgtg cttaaactgt ttatccgtta atggtggttg
    19081 cataggttcc tccttttcgt aggatagtat cattatagca tattatttga gaagaaaagg
    19141 gtttcaaatc tgtttatact atatttgtta gaaaaaataa gggagaagta agatgtcacg
    19201 atttccaaaa aatttcctct ggggaggagc tattgcagct aaccaggcag aaggcgccta
    19261 taatttggat ggacgcggtt tagtccagac agacgttaca acaggaggaa ctgtcaacag
    19321 tccccgctat acaacctaca ttgataagga cggcaagcca ggtaaatatg cttctatggg
    19381 gcatgctggc ggtcatctgc cagaaggggc gacctatgcc gtcctagaag accactatta
    19441 tccaaaccac aaggctgtgg acttctacca ccgctataaa gaagatatca agctctttgc
    19501 agaaatgggt tactccgttt tccgcttgtc gatttcatgg gcacggattt tcccaaatgg
    19561 tgatgatgca gaaccaaacc aagcaggtct tgatttctat cgttctgttt ttgaagaatg
    19621 ccgcaaatat ggcattgagc ctttggtttc catttggcac ttcgatacac ctttgagctt
    19681 ggagcaacgc tatggtggtt ggaccaatcg taagttgatt gatttctatg tccgctatgc
    19741 tgagacaatt tttaatgaat ataaggggat ggtgaaatat tggattacct tcaacgagat
    19801 taacaacacg atcatgtttt tggatatgtt tagtgaacca aaggattctg attaccaaga
    19861 tgcctaccaa cacttacatc accagtttgt tgcctctgcc aaagcagtaa aattaggcca
    19921 tcagattgat ccgaactatc gattcggaaa tatgatttgt ggcatcacct tctacccagg
    19981 aacctgtgac cctgcggata ttttagaaaa tcaacacaaa tgggaacaga atattttcta
    20041 ttgtagtgat gcacaagcca aaggtcgtta tggttcctat gcaaacagac tgtggaagga
    20101 acacaatgtt gtattgcaaa tggaagaggg agacctagaa atccttgctg aaggtaaggt
    20161 ggatatgtat accttctctt attacatgtc aaccgttgtg accactcata aagtggaaga
    20221 cacggtttca ggcaacttct caatcggtgc caagaaccct tacttgacct attcagactg
    20281 gggttgggct caggatccga ccggtcttca atactatctt gagaaaatct acgaccgcta
    20341 tgaaattccg atgatgattg tagaaaatgg tttgggggct ttggatacag ttgaagaaga
    20401 cggctctatt cacgatggtt accgtatcga ttaccatcgt gcccatgtca atgccatggc
    20461 agatgccatt gccaatggtg ttgatttgat cggctatacg acttggggct gtattgacct
    20521 agtatcagca ggaacaggtg aaatgcgaaa acgctatggc tttatctacg ttgatatgga
    20581 tgatgctgga aatgggacac ttgctagaac accaaaagat tcattctact ggtacaagaa
    20641 agtcattgcc agcaatggtg aggatgtgga ataaggaaga cggcgatgtg ccgtttcaga
    20701 ttgaagaaga agtccatttt ggacaatttt cttcaatctt tttttcttta tattgaaaat
    20761 taaaaactct cagaaacgcc gaaatatcaa tgtttctaag agtttaatga cttgctatct
    20821 ttcacaaact tcttcaattt tttatatttt taggagtttg tctaggttct gagacggcac
    20881 tttgccgttt tctattaggg aaaggtttga aaatgaaaat agaacatgta gcaatctaca
    20941 ctcaggattt ggaaggtatg cgtaatttct ttgaaaacta cttcaatgcc acatccaatc
    21001 agctttacca taatctaaaa accagtttca agtcctattt tcttaccttt gaagacgggg
    21061 ctcgtttgga aattatgacc agagacgatg tggtcgacaa accaagtcaa ctcaattatc
    21121 taggacttat tcatttagcc tttagtctag ggagtgagga agctgtggat gagttaacag
    21181 agcgacttgt tgctgcaggc tacttgcttc ttaatggacc acgaataact ggggacggct
    21241 actatgaatc gtgtttgttg ggatttgatg atatacaaat tgaattaaca gtgtaatgtt
    21301 ggcaagtaat actgctaggt caatgtttaa cggattagct ggcaagtatc attcattagc
    21361 gatttcctta ctgttacgga aaaaactgca atggtgattg atgtaaacgt ttgctaaact
    21421 aataactata ggaacctgta ttcacaagta gggggcttgt atataagaga tgtttttgag
    21481 ggaatactga ctgtattttg aaaaaaacta acaatgagta gcttaaaaat tagtcttaga
    21541 tggaaattct gaactgtaaa tacaggttct aaaatataca ggaggcaatt atgtctaaat
    21601 tacctaaaaa ttttttatgg ggtggagcag tagcagctca ccaacttgaa ggtggctggc
    21661 aagaaggtgg aaaagggatt tctgtagcag atgtgatgac tgcaggaaga cacggggtac
    21721 ctagagaaat tacagctggt gtattagaag gaaaatatta tcctaatcat gaggccattg
    21781 atttttatca tcgctacaaa gaagatattg cattgtttgc agagatgggc ttcaagtgtt
    21841 tccgtacttc aattgcatgg acacgtattt ttccaaaagg agacgaatta gagccaaatg
    21901 aagctggctt gcagttttat gatgacttat ttgatgagtg tttaaaatat gggattgaac
    21961 ctgttgttac cctatcacac tttgagttac cttatcatct ggtaaccgag tatggtggtt
    22021 ttagaaaccg tcagacaatt aatttctttg tccgttttgc tgagacctgc ttccgtcgtt
    22081 acaaggataa ggtcaaatac tggatgacct ttaatgagat taataaccaa gcaaactatc
    22141 aggaagattt tgcgccgttt actaactcag gtatcgttta tcaagaaggt gaaaatcgtg
    22201 aagcagttat gtatcaagcg gcccattatg aattagttgc ctctgcacgc gctgttaaaa
    22261 ttggacatga aattaatcct gactttcaaa ttggttgtat gattgccatg tgtccgatat
    22321 atcctgcaac ctgtaaacca tcagatattt tgatggcaca gaaggcgatg caaaaacggt
    22381 attactttgc agatgttcat gtgcatggtt tctaccctga gcatatcttg cgctactggg
    22441 agagaaaagg tattagcgtt gatttcacag aggaagatcg cgaagatttg ctagaaggaa
    22501 cagttgatta catcggtttc tcatactata tgagttttgc tattgattct caccgcgaga
    22561 ataatcctca ttacgattat cttgagacag aggacttggt gaaaaatacc tatgtgaagg
    22621 cttctgattg ggaatggcaa attgacccag aaggattgcg ctatgcatta aactggttta
    22681 cagatatgta tcatctgcca ctttttatcg tagagaatgg ctttggtgcg attgaccaag
    22741 tcgaagaaga tggaatggtg catgatgact accgtattga ttatcttggt gctcatatca
    22801 aagaatttat caaggctgtc gatgaggatg gagttgactt gatgggatat acgccgtggg
    22861 gttgtattga cctggtgtca gcagggacag gtgaaatgcg caaacgctac ggttttatct
    22921 atgttgataa agatgatgaa ggaaatggta gttatgcgcg ttctccaaaa cgctcattcg
    22981 catggtacaa aaatgtcatc acaacaaatg gtgaggaagt ttgatgagaa gacctctgta
    23041 gcgtaatagc tacatgggtc ttcatttatg tttttagtat tggtatgtta aaggagaaaa
    23101 ttgtatggtt ggttttatcg cagcttgctt aactaccttt ggatttgtac ctcaggttat
    23161 caaggtagtt aagacaaagg atacagagtc gatttcgtta ggaatgtata tgatgtctgt
    23221 gacagggatg tccttatggt tgttccatgg tattattcaa ggagatacgg ccctcattat
    23281 tgctaatagc ctatctgtaa cattagcagg tattattttg gtctataaat tagtctacaa
    23341 ataatgtact attccatcga taaaagaatt tttagcaaca gtgaaaaaca ttgaaaatgc
    23401 ttgacttttt ctgtgaaagg aatataatga tgacaaataa atattggaag tgtgattgct
    23461 atgttattcg ttccgctttt tttaaggttt aaccttttta aaccaccaag ataagcgttt
    23521 tttctagttg tttgtaagtg tatcgtatct tggaaaagag gtttattatg gaatctatag
    23581 ttggaatagt tgtcattgta gttgttacgg ttgttctggt ttatttatta actaatatgt
    23641 ggaaaatcag agcggcttca gttggtcaaa cggatgacac tacgctatac tttgtaagat
    23701 ttaagggggt aaatccgcca gacttagcaa atagtagtgt ttttaatcaa gtagccaaaa
    23761 tcaaatgtgc taaaggagat acctatcaag tcacttcaac agtcaatgat gtgaaactga
    23821 gagacgtgat tatggatgaa tttcagctca aatcttctga ggttgtagtt tactatcctc
    23881 ctcgtctttt cttttatgca tcatagtcgc aactcttcgg agttgctatt tttttgtttc
    23941 tggagagtag cggaaaagcg gtttatttta gtagcgaaat ttccgtagtg gtaaggaaat
    24001 acttcctatg gaaaatgtaa gcgtgttcat gtaaaatgaa atcataacaa aagtaaataa
    24061 taaaatagtt ggaggaaaat cctatggtaa aagctttgat tatctgtgca ggaggcatgt
    24121 cttcttcact tattgctaaa aaaacacaaa cacttttgga agaacaaggt cataaagtag
    24181 aaatgaacgc tgttggtgtt ccagaaggtg gtaaaaaaat taatgcggca gagtatgact
    24241 tgtacttaat tagcccgcag acaaaaatgc actttaagca atttgaagaa gcaggtaaga
    24301 aggttgggaa gccaattgtc caaatcccac cacaagctta tatcccaatt ccaatgggaa
    24361 ttgaaaaaat ggctaaattg gtcttggata atatctagtt ctttgttacc atagatggta
    24421 tattgattcg aaaagaggat agttatgcta agtactaagg aaaaaatgat attgcagtat
    24481 ctttaccaac accagaatgt tttttcaacc agtaaagtat tggcagagca tctctcttat
    24541 acagatcgca caattcgaac ttatataaaa aaaatggcat ccgaaatatc tgagggagaa
    24601 acaggttttg caattttatc taaacaaggt tatggctatc agcttcgaat tagcgatgag
    24661 gaaaaatacc atcgtttctt atctgaaaac caactaatat tgggggtgga ttatagtgat
    24721 gcagaaaatc gccataaaca aatcctgaat aaattgatat ttgaagaaga atgtatctta
    24781 tttgatgatt tggcggacca gctgtttgtc agtagatcaa ccttgtctca tgatttcaag
    24841 cacattaggg agcatcttgc ttcttatggt ttgagcatcg agagtaagcc ctataaggga
    24901 gtctatgtgg ttggtgaaga acgtcaaaaa cgtcacttca tcatggacta tttctttagt
    24961 gaacattttt atcagaatat ccatcatttt ttatccaatg ataaaagtct agccttacct
    25021 ctatcttttg aagagctgac aattgtagtc ttagatgagt gtcgtgatag tcagttgaaa
    25081 ctatctgatt atattatcca aaatttagtt attcatttag gtttagctat ccaacgctat
    25141 caaaaaggtt ttacaatttc tcctgtcacc atcgataagg aaaagtatac tgaagaattg
    25201 gcagtagcta caaagattgc taggcgatta tcccatcgac tggaacctca gaataggttt
    25261 cctgaggaag aagtggtcta cattgctcta cacttgattt caaaaacaca attggaggtg
    25321 gagaagtcat cggaccgcct cttgttgcgc caagcacttt ttgaagtttt agggcgttat
    25381 gatgatgaat atggttatca attttcacat gatttttcct tgatagaagg tttgctaaca
    25441 catctggagg ttctcgtaga acgactccgt cacaatctcc atattgataa ccccctactt
    25501 gatgatatta aaacaactta tcatgatatc ttcgatttga cacaatcatt aatggctgaa
    25561 ctttcagttt ttcactctta tagcttgtcc gagtcagaaa ttgcctatgt agctctacac
    25621 ttgatggctt ccttggaacg gcaaaaagaa aaatacaaac taaatgttct ggttatctgt
    25681 gcaacaggct acggtagtgc tcagatgctg aaaaatagga ttaaaaatga acttgggcaa
    25741 caggtgtcca tatcagatgt catcggttac tatgatttag ataatcaaaa gttgcagggg
    25801 atagatgtga taatgtcaac catcgactta tctggtttgg tgtttaaggt ccctgttata
    25861 actgtcagtg tctttttaac ggatcaggaa gttaaggaag ttaaacaacg attggcggac
    25921 ttgagaccta gtctccaaaa accacaggta gtggaaagag aaagtaactt ggagaaatac
    25981 tttgatcagt acttctcaga acaacgattt ttagttgttg agtcagctga aaaagaaatg
    26041 ttattaaagc aaatgatttt acagttggag agcgaaggtc taggaaatca ccaggaattt
    26101 tataaattaa ttgaggcgcg tgaaagcttg agtacattgg tatttgataa agatatagct
    26161 gttcctcacc ccctaaaacc cattagcgaa aagcacatga tttctgttgc ggttataaaa
    26221 aatggtctat attgggaaga aggctatggg cagattagat tggttttctt agtgagtcca
    26281 tctatatata caaatgaagg tctatcaacc attaccaatc gattggtaga tttggtagat
    26341 ttaccagaag tcaagaaaga cataataaac tctcctgatt ttgaaacatt caaacacgtt
    26401 tttttacaaa gagaatagaa ggtgacatat gaatacagaa gaattacaaa tggctgcatt
    26461 tgggatcatc ctcagtagtg gcaatgcaag aagtgttatc cacgaagctt ttgctgctat
    26521 gagagaaggt gattatgata aggcagaaga gttattggaa gcagccaatg ctgacatgct
    26581 tgaagcccac cattctcaaa cgggtctcct acaggaatac gcaagcggta ctgaagtgaa
    26641 ggtagagatt attatggttc atgcgcaaga tcatttgatg acaacaatga ctttacgtga
    26701 ggtagcgctt gaaatgttag ctttgtatcg taaagttggt tagaaagagg acatgggatg
    26761 agtaagggaa tggcaagtaa aaagctacag aaaacaccag aacaattaaa acaagagtct
    26821 aaacgcaaaa gtcagctctt taatcgctat atgctgtttc gttatagttt agcagtgttc
    26881 ttctttgcaa atctatactg gcttctggtt caattatttc aaccaagttt gtatctaatc
    26941 ctgccctcgc ttatgctgat tgcaataatc attgcgacgg cagaacaatt taagttgtat
    27001 agtgctgagg agtctcgatt gacaaagaca gaatttgtat taagggcaca agcaatcttg
    27061 caagggttaa ttgtggtttt agtgattttg ggtcatatct caaccctctt tccaactttt
    27121 tcaaaccata catctgctaa actctttgtt attggcttgc agttgttagg tattgcttta
    27181 gttgttctca atttaaaaag gttggagcag gtaaagcaaa ataccgataa atactaccta
    27241 cgttttcaaa taataagaaa atatcttt
//
LOCUS       DBNFCX010000022        26799 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.022, whole genome shotgun sequence.
ACCESSION   DBNFCX010000022 DBNFCX010000000
VERSION     DBNFCX010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 26799)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26799)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26799
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.022"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(555..1847)
                     /gene="purB"
                     /locus_tag="AC1PJC_000807"
     CDS             complement(555..1847)
                     /gene="purB"
                     /locus_tag="AC1PJC_000807"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HIP6619828.1"
                     /translation="MLNRYSRPEMAAIWSEENKYKAWLEVEILADEAWAELGEIPKED
                     VALIREKATFDIDRILEIEEETRHDVVAFTRAVSESLGEERKWVHYGLTSTDVVDTAY
                     GYLYKQANDIIRRDLENFTNIIADKAREHKYTIMMGRTHGVHAEPTTFGLKLATWYSE
                     MKRNMERFDVAAKGVEAGKISGAVGNFANIPPFVEEYVCGKLGIRPQEISTQVLPRDL
                     HAEYFSALALIATSIERMATEIRGLQKSEQREVEEYFAKGQKGSSAMPHKRNPIGSEN
                     MTGLARVVRGHLVTAFENVTLWHERDISHSSAERIITPDTTILINYMLNRFGNIVKNL
                     TVFPENMKRNMESTFGLIYSQRVMLSLIEKGMTREEAYDLVQPKTAQSWDNQVDFKPL
                     LEADERVTAKLSQEEIDELFNPDYYAKRVDDIFERLGL"
     gene            complement(2011..3492)
                     /locus_tag="AC1PJC_000808"
     CDS             complement(2011..3492)
                     /locus_tag="AC1PJC_000808"
                     /inference="COORDINATES: protein motif:HMM:NF037255.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN-like domain-containing protein"
                     /protein_id="HIP6619829.1"
                     /translation="MDWNEIYNLYETDESVMYESAILIFDTSSLLELYYYSTDSAIEI
                     LEKCNYHFNGRIFLPNHVKFEYDKDRETIIKKQALSYNNVFKKDESVGFFAKIIYQQE
                     MLKKMRIDTENAIKNFEKQFGNRHTHPYFSSTFIEEFKEKVNIFNRSLSELEDSNIFY
                     DFEDRLKREKDERIAEINNQVEQDVLKDFIETNFKIGESYSFSKILDIVREGELRYSA
                     SVPPGYMDKEKQGFQIYGDLIIWKQILEYARLKSSPVIFVSDDTKEDWNEILEGQEQN
                     KKKKKTDPRKPRYEILLEFNDEVGKKIKKIRLYDFLYELNKQLETKFGSSTLSEIKNK
                     SLGESLEVEAFDFIRKLERGLEEEQRNELEPEHAYEFYEIDNFVDLVSIDEIRLDAKD
                     ENSYCIEYFATFDCNFECEYFEYWGRDDDTKEAVTSPASEIRASGELLVKVERDIKVE
                     FGEDFSPRIKDEVEPSIEIIEDNRDIYERSWEDKFAEDSYDYY"
     gene            complement(3507..4580)
                     /gene="purK"
                     /locus_tag="AC1PJC_000809"
     CDS             complement(3507..4580)
                     /gene="purK"
                     /locus_tag="AC1PJC_000809"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001048172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HIP6619830.1"
                     /translation="MTSSKTIGIIGGGQLGQMMAISAIYMGHKVVTLDPVADCPASKV
                     SEVIVAPYHDVAALKQLAERCDVLTYEFENVDADGLDAVIKDSQLPQRTDLLRISQNR
                     IFEKDFLAKKAGVQVAPYKVVTSSLDLEGLDLSKNYVLKTATGGYDGHGQKVIREAAD
                     LVEASQLANSVECVLEEFVNFDLEISVLVSGNGSVYTVFPVQENIHRNNILYKTIVPA
                     RISDELAEKAKTMALQIADKLHLAGTLCVEMFVAGQDILVNEIAPRPHNSGHYSIEAC
                     DFSQFDTHIRGILGMPLPPIRLLSPAVMINVLGQDLEAAQTFLQENPTAHPHFYGKLE
                     AKHNRKMGHVTVLTKDVDGVEEF"
     gene            complement(4567..5055)
                     /gene="purE"
                     /locus_tag="AC1PJC_000810"
     CDS             complement(4567..5055)
                     /gene="purE"
                     /locus_tag="AC1PJC_000810"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018363844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HIP6619831.1"
                     /translation="MKPIISIIMGSSSDWKTMKKAADVLDKFGVAYEKKVVSAHRAPD
                     LMFRHAEEARGCGIKVIIAGAGGAAHLPGMVAAKTTLPVIGVPVQSRALSGVDSLYSI
                     VQMPGGVPVATMAIGEAGATNAALTALRILSIEDPTIADQLADFAKEQEKIAEAMTDD
                     LI"
     gene            complement(5052..5498)
                     /locus_tag="AC1PJC_000811"
     CDS             complement(5052..5498)
                     /locus_tag="AC1PJC_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF523 domain-containing protein"
                     /protein_id="HIP6619832.1"
                     /translation="MENKQTCVLVSACLLGENCKYNGGNNYNQVVVDAVSDKQVLSVC
                     PEVAGGLPTPREPVEIVDGSVRDVSGTSYDKTFQQGIARTLERLEGQEIEMAILQSRS
                     PSCGVKQVYDGTFSGQKVAGSGLFAQALKERGYQVVDAEDINEVTS"
     gene            complement(5488..6753)
                     /gene="purD"
                     /locus_tag="AC1PJC_000812"
     CDS             complement(5488..6753)
                     /gene="purD"
                     /locus_tag="AC1PJC_000812"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HIP6619833.1"
                     /translation="MKLLVVGSGGREHAIAKKLLESSQVEQVFVAPGNDGMTLDGIEL
                     VNIGISEHSALINFAKENDIAWTFVGPDDALAAGIIDDFEQAGLKAFGPSRLAAELEW
                     SKDFAKQIMVKYGIPTAAFGTFSNFEEAKSYIEEQGAPIVVKADGLALGKGVVVAETV
                     EQAVEAAREMLLDNKFGDSGARVVIEEFLAGEEFSLFALVNGDQFYILPTAQDHKRAF
                     DGDQGPNTGGMGAYAPVPHLSQSVVDIAVDTIVKPILDGMIAEGRSYLGVLYAGLILT
                     DQGPKVIEFNARFGDPETQIILPRLTSDFAQNIDDILHQRPTQLTWLDSGVTLGVVVA
                     SNGYPLDYEKGVTLPAKTGGDITTYYAGARFAENSRALLSNGGRVYMLVTTADTVQEA
                     QEKIYSELKNQDTTGLFYRTDIGGKAIGK"
     gene            complement(6868..7614)
                     /locus_tag="AC1PJC_000813"
     CDS             complement(6868..7614)
                     /locus_tag="AC1PJC_000813"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619834.1"
                     /translation="MFGYFKKNWYVILLLVGLIFISGPIFSLFLTYIQQALNSSLGDW
                     LSFYGAIIGIGISFFVFHFQLFIDKEKFRISQRPEMFLDYSYQVVKASSYVYYHDKYW
                     YGLIQSNKNTKKLAVNSFQNSYGVDNKRDKALSVEIVNNQPLFNLQIQFGDSSDYAII
                     PKLSEGQKIYIVSKKHQEAIFNYLLFNIPDFDHIPSELTIYYTTLSGEKIRRMYRIDE
                     KGQVSMVKEQSIASYSPPSNLNYVCDYFIK"
     gene            complement(7737..9284)
                     /gene="purH"
                     /locus_tag="AC1PJC_000814"
     CDS             complement(7737..9284)
                     /gene="purH"
                     /locus_tag="AC1PJC_000814"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006146083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HIP6619835.1"
                     /translation="MTKRALISVSDKAGIVEFAQELTKFGWEIISTGGTKVALDQAGV
                     TTIAIDDVTGFPEMMDGRVKTLHPKIHGGLLARRDLDSHLQAASDHEIGLIDLVVVNL
                     YPFKETILRPDVTYNLAVENIDIGGPSMLRSAAKNHASVTVVVDPADYPTVLGEIAEQ
                     GETSYATRQRLAAKVFRHTAAYDALIADYFTKQVGEDKPEKLTITYNLNQPMRYGENP
                     QQNADFYQNALPTDYSIAAAKQLNGKELSFNNIRDADAAIRIIRDFKDRPTVVALKHM
                     NPCGIGQAETIEQAWDYAYEADPVSIFGGIVVLNREVDAATAEKMHPIFLEIIIAPGY
                     SAEALAILTNKKKNLRILELAFDAQDASEVEKEFTGVVGGLLVQDQDVVVESPADWQV
                     VTERQPSEQEWAAMEFAWKSSKYVKSNGIIITNDKMTLGVGPGQTNRVASVRIAIEQA
                     KDRLEGAVLASDAFFPFADNVEEIAAAGIKAIIQPGGSVRDQDSIDMANKYGLTMVFT
                     GVRHFRH"
     gene            complement(9281..10396)
                     /locus_tag="AC1PJC_000815"
     CDS             complement(9281..10396)
                     /locus_tag="AC1PJC_000815"
                     /inference="COORDINATES: protein motif:HMM:NF025639.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HIP6619836.1"
                     /translation="MEELGANRKRDFCVQQLKSSPLFAISLGGKEISHSNFWAWLIDL
                     KVDGINPFVEVFIPSFYSSGYIYESCTREEDHRDLSIYYQQKGQGKCHIVENKLKSLP
                     IGDQLLKYEQNFKKKNYEFSSGTITGLTKVLELQSWQFLSYKVISERIINILEHTKGI
                     SSINRELIMLYANDISCLSDLLLEEIESTKDRYVWKGSRYLEELKFDDVFLKYVSNEI
                     AREIEREVMIPAFQSEWGLPKVAISFHNKKATIDIKYHQQFDDQEVGFIGIQIEGKQF
                     RLHSGARIGESSLGNKDNLFNKLLELGYLENYSNKEIRGRESSLTKQYGKYGHDIYQY
                     WNIGDMSRKELIICIKEELPKVINTITKGLDFIKEKS"
     gene            complement(10370..10918)
                     /gene="purN"
                     /locus_tag="AC1PJC_000816"
                     /pseudo
     CDS             complement(10370..10918)
                     /gene="purN"
                     /locus_tag="AC1PJC_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000717489.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
     gene            complement(10915..11937)
                     /gene="purM"
                     /locus_tag="AC1PJC_000817"
     CDS             complement(10915..11937)
                     /gene="purM"
                     /locus_tag="AC1PJC_000817"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009729529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HIP6619837.1"
                     /translation="MTNKNAYAQSGVDVEAGYEVVERIKKHVARTERLGVMGALGGFG
                     GMFDLTKLDVKEPVLVSGTDGVGTKLMLAIQYDKHDTIGQDCVAMCVNDIIAAGAEPL
                     YFLDYIATGKNEPAKLEQVVAGVAEGCVQAGCGLIGGETAEMPGMYGEDDYDLAGFAV
                     GIAEKYQIIDGSKVKEGDILLGLASSGIHSNGYSLVRRVFADVSGDALLPELNGRALK
                     DVLLEPTRIYVQQVLPLVKAGLVNGIAHITGGGFIENVPRMFADNLAAEIEEDKIPVL
                     PIFTALEKYGKIKHEEMFEIFNMGIGLVLAVSPDKVDSVCQLVDEEVYTIGRIIAKED
                     KSVVIK"
     gene            complement(11993..13447)
                     /gene="purF"
                     /locus_tag="AC1PJC_000818"
     CDS             complement(11993..13447)
                     /gene="purF"
                     /locus_tag="AC1PJC_000818"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009908857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HIP6619838.1"
                     /translation="MTYEVKSLNEECGVFGIWGHPQAAQVTYFGLHSLQHRGQEGAGI
                     LANDGGHLRRHRGTGLIAEVFKNPADLEALTGTAAIGHVRYATSGSASINNIQPFLFD
                     FADMQVGLAHNGNLTNAVSLKAELEKNGSIFSSSSDTEILMHLIRRSHNPDFMGKIKE
                     ALNTVKGGFAYLIMLEDKLVAALDPNGFRPLSIGKMKNGAWVVASETCAFEVVGADWV
                     RDVEPGEIVVIDDSGIQYDSYTRDTQLAVCSMEYVYFARPDSVIHGVNVHTARKNMGR
                     RLAQEFQHEADIVVGVPNSSLSAAMGFAEESGLPNEMGLIKNQYTQRTFIQPTQELRE
                     QGVRMKLSAVSSVVKGKRVVMIDDSIVRGTTSRRIVQLLRDAGAKEVHVAIGSPELKY
                     PCFYGIDIQTRRELISANHTVEEVCEIIGADSLTYLSLEGMIEAIGIDTDAPKGGLCV
                     AYFDGEFPTPLYDYEEEYLRSLEEKTSFYIENVK"
     gene            complement(13450..17169)
                     /locus_tag="AC1PJC_000819"
     CDS             complement(13450..17169)
                     /locus_tag="AC1PJC_000819"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001042262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HIP6619839.1"
                     /translation="MAKRIFVEKKADFQIKAEALRKELTHNLQLTSLTSVRLVQVYDV
                     FNLEEDLLEQAIKHIFTEQVTDKVLSEAELDLAEAAYFAIEALPGQFDQRAASSQEAL
                     LLLGSRQEVRVNTGQLYILNGDVREEELAAIKNYLLNPVDSRFKDLDAPLVAQEFSVS
                     DATIPNLDFFDSYGAEEFAAYKREAGLAMEVEDLLFIQDYFKSIGRVPTETELKVLDT
                     YWSDHCRHTTFETELRSIDFSASKFHKQLQATYDKYLAMRTELGRTDKPQTLMDMATI
                     FGRYERANGRLDDMEVSDEINACSVEIEVDVDGVKEPWLLMFKNETHNHPTEIEPFGG
                     AATCIGGAIRDPLSGRSYVYQAMRISGAGDITQPLTATRSGKLPQQIISKTAAHGYSS
                     YGNQIGLATTYVREYFHPGFVAKRMELGAVVGAAPKENVVREKPVAGDVVILLGGKTG
                     RDGIGGATGSSKVQTVESVETAGAEVQKGNAIEERKIQRLFRNGDVTRLIKKSNDFGA
                     GGVCVAIGELADGLEIDLDKVPLKYAGLNGTEIAISESQERMSVVVRPEDVDTFIVAC
                     REENIHAVVVAKVTEKPNLVMIWNGQTIVDLERSFLDTNGVRVVVDAKVVDSSVKLPE
                     TRTTSAQTLREDLKDLLSDLNHASQKGLQTIFDSSVGRSTVNHPLGGRHQLTPTESSV
                     QKLPVQQGVTTTASVMAQGYHPYLADWSPYHGAAYAVIEATARLVATGANWSKARFSY
                     QEYLQRMDKQAERFGQPVAALLGSIEAQIQLGLPSIGGKDSMSGTFEDLTVPPTLVAF
                     GVTTADSRKVLSPEFKAAGEHIYYLPGQILSEDIDFALIKSNFKAFEKWQSDYVITAA
                     SAVKYGGVLESLALMSFGNQVGARVELADLETSLTGQLGGFVFTSQEDILDAVKIGQT
                     TTDFTLLVNGVNLSGQDLQVAFEGKLEEVYPTEFEQATDLQDVPAITSSAVIQAKERV
                     EIPVVYIPVFPGTNSEYDSAKAFEQAGAKVNLVPFVTLDAESIEQSVDTMVDNIDKAH
                     ILFFAGGFSAADEPDGSAKFIVTILRNDKVRSAIDSFIENGGLIIGICNGFQALVKSG
                     LLPYGNFEEAGESSPTLFYNDANQHVAKMVETRIANVNSPWLAGVRVGDIHAIPVSHG
                     EGKFVVTDEEFAVLRDNGQIFSQYVDFTGQSSMDSKYNPNGSSHAIEGITSRNGQIIG
                     KMGHSERYEDGLFQNVPGKKDQGLFVSAVRYFTGK"
     gene            complement(17182..17889)
                     /gene="purC"
                     /locus_tag="AC1PJC_000820"
     CDS             complement(17182..17889)
                     /gene="purC"
                     /locus_tag="AC1PJC_000820"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000043309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HIP6619840.1"
                     /translation="MKTDLLYSGKAKDIYATADSDQIVAVYKDQATAFNGGKKEQIVG
                     KGRLNNLISSLIFEKLNEAGVQTHFIKRLSDTEQLNKKVEIIPLEVVLRNVTAGSFSK
                     RFGVEEGIALSTPIVEFYYKKDELDDPFINDEHIAFLELASQDQIAYIKEETRRINGF
                     LKDLFAQIGLTLVDFKLEFGVDSSGQILLADEFSPDNCRLWDADGNHLDKDVFRRGLG
                     ELTEVYEVVLAKLQEVK"
     gene            complement(18007..18255)
                     /locus_tag="AC1PJC_000821"
     CDS             complement(18007..18255)
                     /locus_tag="AC1PJC_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantetheine-binding protein"
                     /protein_id="HIP6619841.1"
                     /translation="MTREQVYQRVVELIQDEKGEDFQVQPESTLADNIAADSVEIMEF
                     VLNLEDEFHVDVPDAAIEHFEVLSDIVDFIYEEVKKRS"
     gene            complement(18248..19255)
                     /gene="plsX"
                     /locus_tag="AC1PJC_000822"
     CDS             complement(18248..19255)
                     /gene="plsX"
                     /locus_tag="AC1PJC_000822"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HIP6619842.1"
                     /translation="MKRIAVDAMGGDHAPQAVVEGVNQALAAFPDIEIQLYGDEAKIN
                     QYLTATERVSIIHTTEKINSDDEPVKAIRRKKEASMVLATKAVKDGQADAVLSAGNTG
                     ALLAAGVFVVGRIKNIDRPGLMSTLPTMDGKGFDMMDLGANAENTSHHLYQYGILGSF
                     YAEHVRGVKQPRVGLLNNGTEDTKGTPVHQEAYKLLAEDKSINFIGNVEARELLNSVA
                     DVVVTDGFTGNAVLKTVEGTAKSIVGQLTGSIKNGGLRAKLGGLLVKPTLKKALGAMD
                     YKTAGGAVLLGLKAPVIKAHGSSDAQSIFYTIKQTRSILEAGIVEKSVAKFSVVEESH
                     D"
     gene            complement(19252..20034)
                     /gene="recO"
                     /locus_tag="AC1PJC_000823"
     CDS             complement(19252..20034)
                     /gene="recO"
                     /locus_tag="AC1PJC_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HIP6619843.1"
                     /translation="MERIETRGLVLYNRNFREDDKLVKIFTEKAGKRMFFVKHASKSK
                     LVASIQPLTYADFIVKINDDGLSYIEDFHQVQPFKNINGDIFKLSYATYILALTDAAL
                     QDKVYDPALFAFLVKTLDLMESGLDYEILTNIFEIQLLGRFGISLNFHECAFCHRVGL
                     PFDYSYKYSGVLCPQHYQQDERRAYLDPNVPYLLDQFQAISFDELETISIKPEMKRKL
                     RLFIDQLYEEYVGIHLKSKKFIDDLSSWGQIMKPRTENEETE"
     gene            complement(20021..21199)
                     /locus_tag="AC1PJC_000824"
     CDS             complement(20021..21199)
                     /locus_tag="AC1PJC_000824"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HIP6619844.1"
                     /translation="MDLLNRFNKNLNRIEVSMIRQFDQSISDVPGILKLTLGEPDFTT
                     PDHVKEAAKAAIDANQSYYTGMAGLLELRQAAAEFVAEKYNLHYNPENEILSTIGATE
                     ALSASLVAILEAGDTVLLPAPAYPGYEPIVNMVGADIVEIDTTANDFVLTPEMLEEAI
                     IEQGDKLKAVILNYPANPTGVTYSREQIQVFADVLRKYPVFVLSDEVYAELTYTGQPH
                     TSIAEFLPEQTILIQGLSKSHAMTGWRIGLIMSQASIIAQIIKSHQYLVTAASTAMQY
                     GAVEALKNGKDDALPMRAEYVKRRDYIIEKMTDLGFKIIKPDGAFYIFAKIPVGYNQD
                     SFSFLQDFARKKAVALIPGAAFGQYGEGYVRISYAASMEKIQTAMARLKEYLEENGTN
                     "
     gene            complement(21286..22254)
                     /locus_tag="AC1PJC_000825"
     CDS             complement(21286..22254)
                     /locus_tag="AC1PJC_000825"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HIP6619845.1"
                     /translation="MAFTDLKLFALSSNQKLAEQVSKKIGIPLGKSSVRQFSDGEIQV
                     NIEESIRGTHVYILQSTSSPVNDNLMEILIMVDALKRASAESVNVVMPYYGYARQDRK
                     ARAREPITSKLVANMLQTAGVNRLLTIDLHAAQIQGFFDIPVDHLMGAPLIADYFERR
                     GMVGDGYVVVSPDHGGVTRARKLAQFLKTPIAIIDKRRSVDKMNTSEVMNIIGDIKDK
                     TCILIDDMIDTAGTICHAADALADAGATAVYASCTHPVLSGPAMDNISKSAIKKLVVL
                     DTIEIAEDRLIDKIEHISTAELLAEAIIRIHEKRPLSPLFEASRVK"
     gene            complement(22357..23613)
                     /gene="pcsB"
                     /locus_tag="AC1PJC_000826"
     CDS             complement(22357..23613)
                     /gene="pcsB"
                     /locus_tag="AC1PJC_000826"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan hydrolase PcsB"
                     /protein_id="HIP6619846.1"
                     /translation="MKKKILATIMLSTVVLSNANYVAVISANDVDSQIAAKNQQISEL
                     TAQQAEAQQQVDAIQGQVDAIVSEQAKLTEENTRLEAESQTLAADIERLSADIVSRDG
                     ALKEQARSAQVDGSASSYINTILDSKSIVDAVSRVNAMREIVSANNRMLEQQKADKEA
                     IVEKQKANQEAITTLAANRQKLEDDAQVLQVRQAELEAAKLNLAVQKATAEDEKNSLL
                     AQKAAAEEAARQAAARQAEYQAQQAALAQQQVASVSAPVVSMPVETTVTETVAAPTQT
                     VSQSTPTVSTPTTSTSSGSGSSAAANNARYDASSYPVGECTWGVKSQLSWVGPYWGDA
                     KQWLASARAEGFSTGSTPQVGAIAVWTGGYYGHVAVVTAVQSSTSIQVVESNYMGRRY
                     IGNHRGGYFNPTTTSEGAVYYIYPPY"
     gene            complement(23698..24213)
                     /gene="mreD"
                     /locus_tag="AC1PJC_000827"
     CDS             complement(23698..24213)
                     /gene="mreD"
                     /locus_tag="AC1PJC_000827"
                     /inference="COORDINATES: protein motif:HMM:NF016019.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HIP6619847.1"
                     /translation="MRNKMIEIFMFPILFFILLLDGQISTLVTNWSVGLFTISSHLVL
                     MLAIFYANYVSLGFSLFIFTLLGLVYDISYLNLIGIATTTLPLVLYCIYFFFQGAVSK
                     RGINILILLVAIFQFEFISYSFARIFHITNLSVFIFVFNKLLPSLLFNLALFFVLQPL
                     FERLFGITNKT"
     gene            complement(24203..25039)
                     /gene="mreC"
                     /locus_tag="AC1PJC_000828"
     CDS             complement(24203..25039)
                     /gene="mreC"
                     /locus_tag="AC1PJC_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HIP6619848.1"
                     /translation="MNKFSKLVVVVSIFLLLSFSLLFVTFSKGLQVPYLNDIVRVVVT
                     PIQSVISVPTRFFSEQKDVLTDLMNAYEENKQLKESIMSLEGMAAENTSLKEENASLR
                     SSLGVVSDFPEKQLIPGSVLVRTPSSWSEHISINIGETSGVTSNALVVANGGLVGIVS
                     SLSSDSAVVTLFTNSDEFTKLPVKISVDSKEIYGILSGYDADTNSFIINQLNSADEIA
                     VGSNVVTSDLAGATPANVQIGKVLSVKSNSNSLNREVYVEPTASFSNIYSVLVVGQTN
                     AQ"
     gene            complement(25099..25186)
                     /locus_tag="AC1PJC_000829"
     tRNA            complement(25099..25186)
                     /locus_tag="AC1PJC_000829"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(25150..25152),aa:Ser,seq:gct)
     gene            complement(25199..25272)
                     /locus_tag="AC1PJC_000830"
     tRNA            complement(25199..25272)
                     /locus_tag="AC1PJC_000830"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(25236..25238),aa:Ile,seq:gat)
     gene            complement(25304..25376)
                     /locus_tag="AC1PJC_000831"
     tRNA            complement(25304..25376)
                     /locus_tag="AC1PJC_000831"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(25341..25343),aa:Phe,seq:gaa)
     gene            complement(25392..25465)
                     /locus_tag="AC1PJC_000832"
     tRNA            complement(25392..25465)
                     /locus_tag="AC1PJC_000832"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(25429..25431),aa:Met,seq:cat)
     gene            complement(25476..25565)
                     /locus_tag="AC1PJC_000833"
     tRNA            complement(25476..25565)
                     /locus_tag="AC1PJC_000833"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(25527..25529),aa:Ser,seq:tga)
     gene            complement(25573..25646)
                     /locus_tag="AC1PJC_000834"
     tRNA            complement(25573..25646)
                     /locus_tag="AC1PJC_000834"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(25610..25612),aa:Ile,seq:cat)
     gene            complement(25663..25736)
                     /locus_tag="AC1PJC_000835"
     tRNA            complement(25663..25736)
                     /locus_tag="AC1PJC_000835"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(25700..25702),aa:Met,seq:cat)
     gene            complement(25749..25822)
                     /locus_tag="AC1PJC_000836"
     tRNA            complement(25749..25822)
                     /locus_tag="AC1PJC_000836"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(25786..25788),aa:Pro,seq:tgg)
     gene            complement(25870..25943)
                     /locus_tag="AC1PJC_000837"
     tRNA            complement(25870..25943)
                     /locus_tag="AC1PJC_000837"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(25907..25909),aa:Arg,seq:acg)
     gene            complement(25962..26045)
                     /locus_tag="AC1PJC_000838"
     tRNA            complement(25962..26045)
                     /locus_tag="AC1PJC_000838"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(26009..26011),aa:Leu,seq:taa)
     gene            complement(26053..26124)
                     /locus_tag="AC1PJC_000839"
     tRNA            complement(26053..26124)
                     /locus_tag="AC1PJC_000839"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(26090..26092),aa:Gly,seq:gcc)
     gene            complement(26137..26209)
                     /locus_tag="AC1PJC_000840"
     tRNA            complement(26137..26209)
                     /locus_tag="AC1PJC_000840"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(26174..26176),aa:Thr,seq:tgt)
     gene            complement(26224..26305)
                     /locus_tag="AC1PJC_000841"
     tRNA            complement(26224..26305)
                     /locus_tag="AC1PJC_000841"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(26269..26271),aa:Leu,seq:tag)
     gene            complement(26309..26381)
                     /locus_tag="AC1PJC_000842"
     tRNA            complement(26309..26381)
                     /locus_tag="AC1PJC_000842"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(26346..26348),aa:Lys,seq:ttt)
     gene            complement(26447..26519)
                     /locus_tag="AC1PJC_000843"
     tRNA            complement(26447..26519)
                     /locus_tag="AC1PJC_000843"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(26484..26486),aa:Asp,seq:gtc)
     gene            complement(26522..26594)
                     /locus_tag="AC1PJC_000844"
     tRNA            complement(26522..26594)
                     /locus_tag="AC1PJC_000844"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(26559..26561),aa:Val,seq:tac)
     gene            complement(26600..26715)
                     /gene="rrf"
                     /locus_tag="AC1PJC_000845"
     rRNA            complement(26600..26715)
                     /gene="rrf"
                     /locus_tag="AC1PJC_000845"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:15.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
BASE COUNT         7543 a         6587 c         5107 g         7562 t
ORIGIN      
        1 gcttattctt cttaaataat tgtttcattt ttactccttt ttctttaaaa atttactaat
       61 aatataattt actaatctgt ttacaaagta tgacgaccac gacgataggt gtatttgata
      121 atacctagat cgattgttac acgtttattt ttcttaaaaa atttgttcat ttctatttcc
      181 tcctattact ttaacaattt gatttactga tcgatttaca aggtatgacg accacgacgg
      241 tagctatact taataatccc gaggtcaatc gttgtacgtt tgtttacaat cttgaacttc
      301 tttttcatcc ttcttctcct ttcatttttc ctacacttgt ttattcgtaa atcattttga
      361 aaatgattta tttttttcaa gcgtgtatct ccttgagggg tgttttcccc ctcacttact
      421 tattcgcaaa tagttttcat tttttgaaaa aatgttaatt tttttgaata agttgtgagc
      481 ttgttttccc cttcacctat ttattcgcaa gtaaataaaa aaattctctg gaaaatccaa
      541 agaattttaa ttttttataa tccaagtcgt tcaaagatgt catccacccg cttagcatag
      601 tagtctgggt tgaagagttc atcgatttct tcctgactga gtttagctgt cacgcgctca
      661 tccgcttcga gaaggggctt gaagtccact tgattatccc atgactgtgc ggtttttggt
      721 tgcaccaagt cataggcttc ctcacgggtc ataccctttt caatcaaact gagcatgaca
      781 cgctggctgt aaatcaagcc aaaagttgac tccatattgc gtttcatatt ttcagggaag
      841 accgtcaagt tcttaacgat attgccaaaa cgattgagca tatagttgat aagaatggtc
      901 gtatccggcg tgataatccg ctccgctgac gagtgggaaa tatcgcgttc gtgccagaga
      961 gtcacattct caaaagccgt caccaagtga ccacgcacca cacgagccag accggtcata
     1021 ttttcagagc cgatcgggtt gcgtttatgg ggcatagcag agctgccttt ttggcctttg
     1081 gcgaaatact cttcgacttc acgttgttca gatttttgta gtccacggat ttctgtcgcc
     1141 atacgctcaa tagacgttgc aatcaaggct agggctgaga aatattctgc gtggaggtca
     1201 cgaggaagaa cctgggtcga aatttcctgc ggacgaatac ccaatttgcc acaaacatac
     1261 tcttccacaa acggaggaat gttggcaaag tttccaaccg cacctgaaat tttaccagcc
     1321 tcaacgccct tggccgctac atcaaaacgc tccatgttgc gtttcatttc gctataccaa
     1381 gtcgccaact taagaccgaa ggtcgttggc tccgcatgga caccgtgggt ccgacccatc
     1441 atgatggtgt acttgtgctc acgagccttg tcggcgatga tattggtaaa gttttcaaga
     1501 tcacgacgga taatgtcgtt ggcctgcttg tagaggtagc cgtaagccgt gtccaccacg
     1561 tcggttgacg tcagaccgta gtggacccac ttgcgttcct caccaagact ttccgaaacc
     1621 gcacgcgtga aagccaccac atcgtgacgg gtttcctctt caatctctaa aatgcggtcg
     1681 atgtcaaaag tcgccttctc acgaatcaag gccacatctt ctttgggaat ctcacccaac
     1741 tcagcccaag cctcatcagc gaggatttcc acctccaacc aagccttgta cttgttctct
     1801 tcactccaaa tagccgccat ctctggacgg gaataacgat ttagcatatt taaaatatca
     1861 agggtaacaa gaaagcgatt gacttttaga aaatcaatgt tagacactta cgtccaaggc
     1921 gatctatcta aattccgaac tatacaatcg gattcaactc agcaaactaa ccccctatcc
     1981 tttctgcaaa aaaattgtaa ttatttgtta ttagtaataa tcatagctat cttcagcaaa
     2041 tttatcttcc cacgatcttt cataaatatc tctattatct tctatgattt caatactcgg
     2101 ttctacttca tccttaatac gaggactaaa atcttcacca aattcaacct ttatatctcg
     2161 ttcaactttt actaacagtt cacccgaagc cctaatttca cttgccggag atgttactgc
     2221 ttccttagta tcatcatctc gtccccaata ttcaaagtat tcacattcaa aattacagtc
     2281 aaatgtcgcg aagtattcaa tacaataaga gttctcgtct tttgcatcca atctaatctc
     2341 atcaatagaa actaaatcaa cgaagttatc aatttcgtaa aattcatacg catgttctgg
     2401 ctctaattca ttacgttgtt cctcttcaag ccctctctct aattttctaa taaaatcaaa
     2461 agcttcaacc tcaagagatt ctcccaaaga tttatttttt atttccgaaa gagttgaact
     2521 tccaaactta gtctctagct gtttgtttaa ttcatataaa aagtcatata atcttatttt
     2581 tttaatcttc tttcctactt catcgttaaa ttctaataaa atctcatacc taggtttcct
     2641 tggatccgtc ttcttctttt tcttattctg ttcttgacct tctaagatct cattccaatc
     2701 ctctttagta tcatctgaaa caaaaataac tggactagac ttaagtctag catattctaa
     2761 tatttgtttc caaattatca aatctccata tatttgaaaa ccttgttttt ctttgtccat
     2821 ataaccaggt ggaacagatg ctgaatatct taattcccct tctcttacta tgtccagaat
     2881 tttagaaaat gaataactct ctcctatttt aaaattagtt tcaataaaat ctttaagaac
     2941 atcttgttca acttgattgt ttatttctgc aatacgctca tctttttctc tcttaagtct
     3001 atcttcaaaa tcataaaaaa tattagaatc ctctaactca gaaagactcc tattaaaaat
     3061 attcaccttt tctttgaatt cttcaataaa cgtagatgaa aaatatggat gggtatgtct
     3121 atttccaaat tgtttctcaa agttcttaat agcattttca gtgtcaattc tcatcttttt
     3181 taacatttct tgctgataaa ttatctttgc aaaaaaacca acactttcgt ccttcttaaa
     3241 aacattgtta tagcttaatg cttgcttttt tattatagtt tcgcgatctt tatcatattc
     3301 gaacttaaca tgattaggta aaaatattct accattaaaa tgataattac acttttcaag
     3361 aatttcaatc gctgaatctg tactgtaata atataattct aacagtgatg acgtatcaaa
     3421 aattagaatt gcactctcgt acatgacgct ttcgtctgtt tcatataaat tatatatttc
     3481 attccaatcc atgactatcc tccttcctaa aactcctcca caccatcaac atctttcgtc
     3541 aacaccgtca cgtgtcccat tttgcgattg tgctttgctt ctagtttacc ataaaagtgg
     3601 ggatgggcgg tagggttttc ttgaagaaaa gtttgggctg cttccaggtc ttgtccgagg
     3661 acgttgatca tgacagctgg agaaagcaga cgaatcggag gcaaaggcat ccctaaaatg
     3721 cctcggatat gggtatcaaa ctgtgaaaaa tcacaggctt caatggaata atgccctgaa
     3781 ttgtgtgggc gaggggcaat ttcattgacc agaatgtcct gccctgccac aaacatttca
     3841 acacaaaggg tgcctgccaa atggagttta tcggcgattt gcagggccat ggttttggct
     3901 ttttcagcta gttcatctga aatacgggct ggcacgatag ttttgtaaag aatattattg
     3961 cggtggatgt tttcctgcac aggaaagact gtgtagacgg agccattccc ggacacaagg
     4021 acggagattt ccaggtcgaa attcacaaac tcttccaata cacactcgac agagttggct
     4081 aactgactgg cttctaccaa gtccgccgct tctcgaataa ccttctggcc atgtccgtcg
     4141 tagcccccag tggctgtttt caagacgtag tttttgctga gatccagacc ttctaggtct
     4201 aggctagaag tgacaacttt gtaaggggcg acttgcacgc cagctttttt tgccaaaaaa
     4261 tccttctcaa aaatgcggtt ttgggaaata cggaggaggt ctgtcctctg agggagctgg
     4321 ctgtccttga tgaccgcgtc cagtccgtcg gcatcgacat tttcaaactc gtaggtcagg
     4381 acatcgcacc gctccgccag ctgtttgagg gccgccacat catgataggg agcgacaatg
     4441 acctcgctga ccttggaggc tgggcagtcc gctacaggat ccagcgtgac gaccttgtgg
     4501 cccatgtaaa tagcggaaat agccatcatc tgccccagct gaccgccgcc gataattccg
     4561 attgttttag atgaggtcat ctgtcatcgc ctccgcaatt ttttcctgtt ccttggcaaa
     4621 atctgccagc tgatctgcaa tggttgggtc ttcaatggag agaatgcgaa gagctgtcag
     4681 agctgcgttg gtggcaccag cttcaccgat tgccatggtc gcaacaggca caccgcctgg
     4741 catttgcacg atagaataaa gcgaatccac accgctaagg gcacgggact ggacagggac
     4801 gccgatgaca ggcagggttg tcttagctgc taccatacct ggtaaatgag ccgcaccgcc
     4861 cgctcctgcg ataataacct taataccaca accacgcgcc tcttcggcgt gacggaacat
     4921 gaggtctggt gcgcggtggg cagagaccac tttcttttca taagctacgc caaatttgtc
     4981 cagcacatcg gctgcttttt tcatggtttt ccagtcggaa ctagaaccca tgatgatgga
     5041 aatgattggt ttcatgatgt tacctcgttt atatcttctg catctactac ctgatagcct
     5101 ctttctttca aggcttgggc aaataaaccg ctacctgcaa ctttttgtcc tgaaaaggtg
     5161 ccgtcgtaaa cctgcttgac accacaggac ggacttctag attgtagaat ggccatttct
     5221 atctcttgtc cttctagtct ttcaagcgtt ctggcaatgc cttgttgaaa cgttttgtca
     5281 taagatgttc cgctcacatc tcgtacactt ccgtccacaa tttcgactgg ctctcttgga
     5341 gtgggaaggc cgcctgcaac ctctggacaa accgatagaa cttgcttatc cgatacagca
     5401 tcaacaacta cttgattgta attatttccg ccgttgtact tgcaattttc tccaagcaag
     5461 caggcactga ctaagacaca ggtttgctta ttttccaatt gcttttcctc caatatctgt
     5521 ccgataaaag aggcctgtcg tatcttgatt tttcagctca gagtaaattt tttcttgtgc
     5581 ttcttggacg gtatctgctg tggtgactaa catataaact cgaccgccgt ttgatagcag
     5641 tgctctgcta ttttccgcaa aacgcgcccc tgcataatag gtcgtgatgt cacccccggt
     5701 cttcgctggc aaggtcacgc ctttttcgta gtccagaggg tagccgtttg atgccacgac
     5761 aacacccagc gtcacgccac tatccagcca agtcagctgt gtcggacgtt ggtggagaat
     5821 gtcgtcgatg ttctgagcaa aatcagaggt caggcgaggc aggataatct gggtttctgg
     5881 gtcgccaaaa cgggcgttga actcgatgac cttgggacct tggtcggtca gaatcaagcc
     5941 agcatagagc acgcccagat aagaccgccc ttccgcaatc ataccgtcca gaatgggctt
     6001 gacaatggtg tcaaccgcta tgtccaccac actttgagat aggtgaggaa caggagcata
     6061 agcccccatg ccgcctgtgt tgggaccttg gtcgccgtca aaggcacgct tgtggtcctg
     6121 ggctgtcggc aggatataga actggtcgcc attgaccaga gcaaagaggg agaactcctc
     6181 gcccgccaag aactcctcga tgaccacgcg ggcacccgag tcgccgaact tgttgtccaa
     6241 gagcatctcc cgagccgctt cgactgcctg ctcgacggtt tccgccacga ccacaccctt
     6301 gcccagtgcc aagccgtccg ccttgaccac gatcggtgcc ccctgctctt cgatgtagga
     6361 tttggcttct tcgaagttgg aaaatgtgcc aaaggctgct gttgggatgc cgtatttgac
     6421 catgatttgt ttggcaaagt cttttgacca ctccagctcc gcggctagtc tacttgggcc
     6481 aaaagccttt agtcccgcct gttcaaaatc atcaatgata cctgctgcca aagcatcgtc
     6541 tggaccaaca aaagtccatg caatgtcatt ttccttagca aagttaatca gggcagaatg
     6601 ttcggaaatt ccgatattta ctaactcgat accatctaag gtcattccgt catttccagg
     6661 agcaacaaag acctgttcta cctgagaaga ctctaacaat ttctttgcga tagcatgttc
     6721 acgaccacca gacccaacaa ccaaaagttt catttttcac acctcaaaaa cggattttct
     6781 ataaacagta tagcaaaaac agacggattt tgataacaaa aacagaagaa tgttcgggaa
     6841 tggaaaaagc tcacacgagg tgagctacta cttgataaaa taatcacaca cataattcaa
     6901 gttagaggga ggagaataac tagcaataga ttgttctttt accatactca cctgcccctt
     6961 ctcgtctata cgatacattc tcctgatttt ctcccctgaa agagttgtat aataaattgt
     7021 taattctgaa ggaatatggt cgaaatcagg aatattgaat aatagataat taaaaattgc
     7081 ctcttgatgc ttttttgaaa caatataaat tttttgtcct tctgacaatt taggaatgat
     7141 agcgtaatct gaagaatccc caaactgaat ctgaagatta aacaaaggtt gattatttac
     7201 aatctcaaca gaaagtgcct tatctcgttt attatccaca ccatacgaat tttgaaatga
     7261 atttactgct aattttttgg tattcttatt actttgaatc aaaccatacc aatatttatc
     7321 atgataataa acatagctag aagctttcac aacttgatag ctataatcta aaaacatctc
     7381 tggtctctga ctgattctaa atttctcttt gtcaataaat aattgaaaat ggaagacaaa
     7441 aaatgaaata ccaataccaa tgattgcacc ataaaaacta agccagtcgc ccaagctact
     7501 atttagagct tgttgaatat aagttaaaaa aagagagaat attggacccg atataaaaat
     7561 aagaccaacc agcaacaaga taacatacca atttttctta aaatatccaa acatactgca
     7621 atccactcca tgaatataat tctgatagta gtatactaaa ttatcctaaa aattccaaga
     7681 ccattaaaac agaaaaacac ctaacaatta ttagatgttc ctctttctcc aaattctcaa
     7741 tgtctaaaat gtctgactcc cgtaaagacc atagtcaagc cgtacttgtt ggccatgtca
     7801 atggagtctt ggtcacggac agatcctcct ggctggatga tagccttgat gcctgcggct
     7861 gcgatttctt ccacgttatc agcaaatggg aagaaggcat ccgacgccaa aacggctccc
     7921 tctaaacgat ccttggcttg ttcgatagcg atacggacgg acgctacacg gttggtttgt
     7981 cccggcccca cgcccaaggt catcttgtca ttggtgatga tgatgccgtt ggacttgacg
     8041 tacttggagg acttccaagc gaactccatg gccgcccact cttgctcgga cggttgacgc
     8101 tcggtcacca cctgccagtc cgctgggctt tccaccacca cgtcctgatc ctgcaccaag
     8161 agcccgccga caacgcctgt gaactctttt tccacttcgc ttgcatcctg tgcgtcaaag
     8221 gccaactcca aaatccgaag atttttcttt ttattggtca aaatagctag cgcttctgcc
     8281 gagtagcccg gtgcgatgat gatttctaag aaaatcgggt gcatcttttc agccgtcgca
     8341 gcatccactt ccctgttcag cacgacgatg cctccgaaaa tcgatactgg gtcagcctca
     8401 taagcataat cccaagcctg ttcaatggtt tctgcctgcc cgataccaca agggttcatg
     8461 tgtttgagag ccacaacagt tggacggtcc ttaaaatcac ggataatccg aatggccgca
     8521 tccgcatcac gaatgttgtt aaaagacagc tccttaccgt ttagctgttt agcagctgca
     8581 atagaatagt ctgttggcag ggcattttgg tagaaatccg cattttgctg gggattttca
     8641 ccgtaacgca taggctgatt gaggttataa gtaatggtta atttttcagg cttatcttcg
     8701 cctacttgct tggtaaaata atctgctatt agggcatcat aagctgcggt atgacggaat
     8761 acctttgcag ccagtcgctg acgtgttgca tagctcgttt ccccctgctc tgcaatttcc
     8821 cctaaaaccg tcggataatc tgccggatcc accacaacgg tcacgctggc gtggtttttg
     8881 gccgcagaac gaagcatgga cggtccgccg atgtcgatgt tctccaccgc caaattatag
     8941 gtcacatctg gacgtaaaat agtctctttg aagggataga ggttgaccac caccaaatca
     9001 atcaagccaa tttcatggtc gctggcagct tgcaaatggc tgtccaaatc ccgacgtgct
     9061 aacaaaccac cgtgtatttt cggatgaagc gtcttaacac ggccgtccat catctcagga
     9121 aaaccagtca catcgtcaat ggcgatggta gttacaccag cctgatccaa ggcaaccttg
     9181 gtaccaccgg tcgagataat ttcccaacca aacttggtca attcttgggc aaactctaca
     9241 atgcctgcct tgtcggatac gctaattaac gcacgttttg tcatgatttc tcctttataa
     9301 aatctaaacc tttagtaatt gtattgataa ctttaggaag ctcttctttt atacaaataa
     9361 taagttcttt acgtgacata tcccctatat tccagtattg atatatatca tgaccatact
     9421 ttccatattg tttagtcaac gaagattctc tacctctaat ttccttattg ctgtaatttt
     9481 caagatatcc taattcgagc aatttgttaa atagattatc cttatttcct aaacttgatt
     9541 ctcctattct ggctccacta tgtaatcgaa actgttttcc ttcaatctga attccaataa
     9601 aaccaacttc ttgatcatca aattgctgat gatacttgat atcaatcgta gcttttttat
     9661 tatgaaaaga aattgctact tttgggagac cccactctga ttgaaacgct ggaatcatta
     9721 cttctctttc aatttctcgt gctatttcat tcgaaacata ctttaggaaa acatcgtcaa
     9781 atttcagttc ttctaaatat cgagaacctt tccaaacata tctatcttta gtagattcta
     9841 tttcttcaag cagtaaatca ctcaaacagg aaatatcgtt ggcataaagc ataatcagtt
     9901 ccctattgat actagaaata cctttagtat gttctagtat gttgataatt ctttctgaaa
     9961 taactttata agataaaaac tgccaacttt gcagttccag aactttggtc aagccagtaa
    10021 tcgtacctga actaaattca taatttttct ttttaaagtt ttgttcatac tttaacagtt
    10081 ggtctccaat aggaagagac tttaacttat tctcaacaat atggcatttc ccttgacctt
    10141 tttgttggta atatatggat aaatccctat ggtcttcctc acgtgtacaa ctttcataaa
    10201 tataaccaga ggagtaaaag gatggaataa atacttccac aaatggattt attccatcta
    10261 cttttaaatc aattaaccat gcccaaaaat tagaatgaga aatttctttt cctcctaaag
    10321 agattgcaaa taaaggagat gatttcaact gctgaacgca aaaatctctt ttcctatttg
    10381 cccccaactc ctccaaaact actggataga gttggtactc cgcttcatgt attctgactt
    10441 caaaggctcc caaggtgtca tcggccaatc ttggcactcg gacttgtttg atgatttgtc
    10501 ctgtgtcaat accgctgtca acccaatgga ctgtcacgcc actttctgcc acacctgcat
    10561 tccaagcgtc ttcaattcca tgggctcctg gaaattctgg caagtaggcg gggtggatat
    10621 tgatgatccg accttcatac tgagccagca gggttggtcc cacaatcttc atatagcctg
    10681 ccaagaccac caagtcaatc tggtgctggt ctaatagttg gataatggct tcttcgtagg
    10741 tctgcttatc tgaaaactct ttgagttcaa aagcaaaggc tggcacacca agttttttag
    10801 cccgttccaa gacataggag tttctgcggt ctgaaaagac aaaagctact tcaaactgtt
    10861 ctgcgatgac ttggaaattg gagccgttgc ctgatgcaaa cactgctatt cgtttcattt
    10921 gatgaccaca ctcttatctt ccttggcgat gatgcgacca atggtgtaaa cttcctcgtc
    10981 aactagttga cagacactgt caaccttgtc tggactgact gccaggacca atccgatacc
    11041 catattgaag atttcaaaca tttcttcatg tttgatcttt ccgtattttt caagggccgt
    11101 aaagattggg aggactggaa tcttatcttc ttcaatttca gctgcaaggt tgtccgcaaa
    11161 catacgaggc acattttcga taaatccacc gcctgtgata tgggcaatgc cgttgaccag
    11221 acctgctttt accagaggca acacctgctg gacatagata cgtgtcggct ctaataggac
    11281 atccttaaga gctctgccat tgagctctgg caacagagcg tccccagaaa catctgcaaa
    11341 aacacgacgg actagggaat atccgttgga gtggataccg ctggaagcta ggccgaggag
    11401 aatgtcgccc tccttgacct tgctaccgtc gataatctga tacttctccg caataccgac
    11461 agcaaagcca gccaggtcat agtcatcctc gccgtacata ccaggcattt cagccgtttc
    11521 accgccaatc aagccacaac cagcctggac acagccttcc gcaacacctg caaccacctg
    11581 ctccagcttg gctggctcat tttttccagt cgcaatgtag tcgaggaagt aaagtggctc
    11641 tgcacctgct gcgataatgt cgttgacaca catagccacg caatcttgac caatggtgtc
    11701 gtgcttgtcg tactggatag ccagcatgag cttggtgccc acaccgtctg tcccagatac
    11761 caagactggc tctttgacat ccagtttggt cagatcaaac atcccgccaa aaccaccgag
    11821 ggctcccatc acacccaagc gttctgtccg agctacgtgc ttcttgatgc gttcgacaac
    11881 ttcatatccc gcttcgacgt caacgcccga ttgggcgtag gcatttttat ttgtcatttt
    11941 tattcctttc aacagtttac aggtctgtca agtaacgttg acacctctgt ctttacttga
    12001 cattttcaat gtagaaactc gttttctctt ctaggctacg aaggtattct tcctcatagt
    12061 catagagagg cgttggaaat tctccgtcaa agtaagccac acaaagccca cctttgggag
    12121 catcggtgtc gataccaatg gcctcaatca tcccttcaag agaaaggtaa gtcagactgt
    12181 ctgccccaat aatctcacag acttcctcaa cggtatggtt ggctgaaatc agctcccgac
    12241 gggtctgaat atcaattcca tagaaacacg ggtacttgag ttctgggctg ccgatagcca
    12301 catggacttc ttttgcccct gcatcacgaa gaagctggac aatgcggcgg ctagttgtac
    12361 cgcgaacaat agagtcgtca atcatgacca cgcgcttgcc tttgacaaca cttgaaacgg
    12421 ctgacaactt catgcgtaca ccctgctccc gcaattcctg ggttggttga ataaaggtcc
    12481 gctgggtata ttggttttta atcagcccca tttcatttgg caaaccagat tcctctgcaa
    12541 atcccatagc cgcagatagg gaggagtttg gcacaccaac cacgatatcc gcttcatgtt
    12601 gaaattcctg ggccaaacga cgacccatgt tttttctggc cgtatggaca ttgaccccgt
    12661 gaattaccga atctgggcga gcaaaataga catactccat agagcaaaca gccagttgcg
    12721 tatctcttgt atagctatca tattgaattc ctgaatcatc aatgacgaca atttcaccag
    12781 gctccacatc tcgcacccag tcagccccca ctacttcaaa agcacaagtt tcgctggcaa
    12841 ctacccaggc accatttttc atctttccaa ttgaaagtgg acggaaacca ttagggtcca
    12901 aagcagcaac caatttgtct tccaacataa tcaggtaagc aaagccacct ttaacagtat
    12961 tgagagcttc cttaattttt cccataaagt ctggattgtg actgcggcga atcaagtgca
    13021 tgagaatttc agtgtcagaa gaagaagaga aaatggaacc atttttttca agttcagcct
    13081 tcaaactgac cgcgttggtc aaattcccat tatgagccaa acccacctgc atatctgcaa
    13141 agtcaaagag gaagggctgg atattattga tagaagcaga gccagaagtt gcatagcgga
    13201 catgaccaat agcagccgtt cctgtcaagg cttctaaatc tgctggattt ttgaagactt
    13261 ctgcaatcag gcctgttccg cgatggcgac gcaaatgccc accatcattg gctaaaatcc
    13321 ccgccccttc ttgcccacgg tgctgcaagc tatgcagacc aaaataggtc acctgagcag
    13381 cctgcggatg tccccaaatg ccgaaaacac cgcattcttc gttgagtgat ttaacttcgt
    13441 atgtcatatt tattttcctg taaaatagcg aactgctgaa acaaagagcc cttggtcttt
    13501 cttacctgga acattttgga aaagaccgtc ctcgtaacgc tcggaatgcc ccattttccc
    13561 tataatctga ccattgcgac tggtaatgcc ctcaatggca tggctggatc catttggatt
    13621 gtacttagaa tccatgcttg actgaccagt aaagtcaacg tattggctga aaatctggcc
    13681 attgtctcgc aagacagcaa attcttcatc ggttaccaca aattttcctt ccccgtggga
    13741 aactgggata gcgtgaatgt cgccgactcg gacacctgcc aaccaagggg agttgacatt
    13801 ggcaatccgc gtctctacca ttttggcaac gtgctgattg gcatcgttgt agaagagggt
    13861 cggactgctt tcacccgcct cctcaaagtt tccatacggc aacaagcccg atttgacaag
    13921 ggcctggaag ccattgcata taccgatgat gagaccaccg ttttcgatga agctgtcaat
    13981 agcagagcgg accttgtcgt ttcgtaagat agtcacgata aacttagcag acccatctgg
    14041 ttcatccgca gccgagaatc cacctgcaaa gaaaagaata tgtgccttgt caatattgtc
    14101 aaccatggtg tcaacagact gttcaatact ttccgcatcc aaggtcacaa atgggacaag
    14161 attgactttt gcaccagcct gttcaaaggc cttggcagaa tcatattctg agttggttcc
    14221 tgggaagact ggaatgtaaa ccacaggtat ttcaactctt tccttggctt gtataactgc
    14281 tgaacttgta attgcaggaa catcctgtag gtctgtcgcc tgttcaaatt ctgttgggta
    14341 aacttcttct agtttaccct caaaggctac ctgcaagtcc tgtccagaaa ggttgacacc
    14401 gttgacaagg agtgtaaagt ctgtggtggt ttgtccaatc ttcacagcat ctagaatgtc
    14461 ttcttgcgat gtgaagacaa agccacctag ctgacctgtt aggctagttt caaggtctgc
    14521 aagctcaact cttgctccga cttggttacc aaaggacata agggctagac tttctagaac
    14581 tcctccatac ttgactgcac tagcagccgt aatcacataa tcgctctgcc atttttcaaa
    14641 agccttaaaa ttagacttga tcaaggcaaa atcaatgtct tctgataaaa tctggcctgg
    14701 taggtaataa atgtgctcgc cagccgcctt gaactcaggt gagaggacct tgcggctgtc
    14761 tgctgtggtc acaccaaagg caaccaaggt cggcggaaca gtcaagtcct caaaggtacc
    14821 agacatggaa tcctttccac cgatagacgg caagccaagc tgaatttgag cctcaatcga
    14881 accgagcaga gccgctactg gctgaccaaa acgctctgcc tgcttatcca ttcgttgtaa
    14941 atactcctga taggagaagc gagccttgga ccagttggcc cctgttgcca ccaagcgagc
    15001 cgtcgcttca atgaccgcat aggcagcacc gtggtaaggt gaccagtctg ccagataggg
    15061 atgatagccc tgagccatga cagaagctgt cgtcgtcaca ccctgttgga caggcaactt
    15121 ctgcacagaa ctttctgtcg gagtcagctg gtgacgacct ccgagtgggt ggttgacggt
    15181 tgaacgacca acagatgagt caaaaatcgt ctgcaaacct ttctgactag catggttgag
    15241 gtctgataga aggtctttca agtcctctcg tagtgtttgg gcagatgttg tacgtgtttc
    15301 tggtagcttg acagaactgt caaccacctt ggcatccacc accacgcgca caccgttggt
    15361 atcaaggaag gaacgttcca aatcgacaat ggtttgtcca ttccatatca tgactaggtt
    15421 tggtttttca gtcactttgg ctacgacaac cgcatggata ttttcctcac ggcaggctac
    15481 gataaaggtg tctacgtcct ctggacggac aaccacactc atccgctcct gtgattcgga
    15541 aatggcaatt tccgttccgt ttaagcctgc atacttgagt ggtaccttat ccaaatcaat
    15601 ttcaagaccg tctgccagtt ctccaatagc tacgcagaca ccacctgcac cgaagtcatt
    15661 ggattttttg ataaggcgtg tgacgtcacc atttcggaac aagcgttgga ttttgcgttc
    15721 ttcaatagca tttccctttt ggacttctgc accagccgtt tccacagact caactgtctg
    15781 taccttggac gagcctgttg ccccgccgat accgtcgcga cctgttttgc ctcccagtag
    15841 gatgaccaca tcgcctgcga ctggtttttc acggaccaca ttttcctttg gagctgcacc
    15901 gactacggca cccaactcca tacgttttgc gacaaatcct gggtggaaat attcacgtac
    15961 ataagttgtc gcaagaccaa tttggtttcc ataagaagaa tagccatgtg ccgctgtttt
    16021 ggaaatgatt tgctgtggca atttccctga gcgagtagct gtcagaggtt gggtaatatc
    16081 gcccgcacct gaaatccgca tggcttgata aacataagaa cgacctgaca aaggatcacg
    16141 aatagctcca ccgatacagg ttgcggcacc accaaaaggc tcgatttctg ttgggtgatt
    16201 atgggtttca ttcttgaaca tgaggagcca tggctctttc acgccgtcca catccacttc
    16261 aatctccacc gagcaggcat tgatttcatc cgacacttcc atgtcatcca gacgaccgtt
    16321 tgcccgctcg taacggccaa aaatggtcgc catatccata agcgtctgcg gtttatctgt
    16381 ccgacctaac tcagttcgca tagctaggta cttgtcataa gttgcttgta attgcttgtg
    16441 gaattttgaa gctgagaagt ctatagacct cagttcggtt tcaaaagtcg tatggcggca
    16501 gtgatcactc caataagtat ccaagacctt gagttctgtc tcagttggga ctcgaccgat
    16561 tgacttgaaa tagtcctgaa taaagagcag gtcttccact tccatagcca aaccagcctc
    16621 acgcttgtaa gccgcaaatt cctctgcccc atagctatca aaaaagtcca agtttggaat
    16681 agtcgcatct gacaccgaga actcctgagc caccaaagga gcatccaagt ccttgaaccg
    16741 cgaatccaca gggttgagca aatagttctt gatagcagct aactcttctt cccgcacatc
    16801 gccattcaag atatagagct gacctgtatt gacacgcacc tcctgacgac tgcccaataa
    16861 gagaagggcc tcctgactgc tggcagctcg ctgatcaaac tgcccaggaa gagcctcaat
    16921 cgcaaaataa gcagcctcgg ccaagtccag ttccgcttcc gacaagacct tgtccgtcac
    16981 ctgctcggta aagatatgtt tgatagcctg ctccagcaag tcctcctcaa gattgaaaac
    17041 atcataaacc tgcaccagac gtacactcgt caaactcgtc agctgcaaat tatgagtcaa
    17101 ctccttgcga agagcctccg ccttaatctg aaaatccgcc ttcttctcaa caaaaatccg
    17161 cttcgccatt ttttccaatc cttacttcac ttcttgtaac tttgccaata cgacctcgta
    17221 aacctcggtc aactccccga gaccccgacg gaaaacatcc ttgtccagat ggttgccatc
    17281 cgcatcccac aaacgacaat tatcaggaga aaactcatcc gccaataaaa tctgaccaga
    17341 cgagtcaacc ccaaattcta gcttgaaatc caccaaagtc agcccaatct gcgcaaacaa
    17401 gtccttcaag aacccattga ttcgtcttgt ttcttccttg atataggcga tttgatcctg
    17461 actagccagt tctagaaagg caatgtgttc atcgttgata aaaggatcgt ctaattcatc
    17521 ttttttatag taaaattcca cgataggagt agataaggca atcccttctt ccaccccaaa
    17581 gcgttttgag aaagaacctg ctgtcacatt tcgcaaaacc acctcaagag gaataatctc
    17641 caccttctta ttcaactgct ccgtatccga caaacgcttg ataaaatgcg tctggacacc
    17701 cgcttcattc aatttttcaa aaatcaaaga ggaaatcaga ttattgagcc ggcccttacc
    17761 cacaatctgt tctttcttac caccattaaa agccgtcgcc tgatccttat aaaccgcaac
    17821 aatctggtcg ctgtcagccg ttgcgtagat gtctttggct tttcctgaat agagaaggtc
    17881 tgttttcatg agaatgttcg cctttcgtaa aatattctag tcttttcgtt tattctaaca
    17941 tacaacattc gtattcacaa caaatttacg gttatttagg aaaaaacaaa gaaaaacgcc
    18001 cgtaaactac gaacgttttt ttacttcttc ataaataaaa tcaacaatat cagataggac
    18061 ctcaaaatgc tcaatagcag catctgggac atctacatga aattcatcct ccaaattaag
    18121 aacaaattcc atgatttcta ctgaatctgc tgcaatatta tctgccaaag tagattcagg
    18181 ttgaacttga aaatcttctc ccttttcatc ctgaattaat tcaacaaccc gctgatagac
    18241 ctgctctcta gtcatgactt tcctccacta ctgaaaattt ggccactgat ttttcaacaa
    18301 tgccagcctc caaaatcgaa cgcgtctgct tgatcgtata gaaaattgac tgagcatcgc
    18361 tggatccgtg cgccttgatg acaggtgctt tcagaccaag caagacagca ccacctgcag
    18421 ttttatagtc catagccccc aaggcctttt tcaaggttgg tttgaccaag agaccaccca
    18481 atttagcacg cagaccacca ttcttgattg agcccgtcaa ctgaccaacg atggattttg
    18541 ctgtcccttc gactgttttc agcacagcgt ttcccgtgaa accatccgtc acgaccacat
    18601 ccgccacgct gttaagcaac tcacgcgcct ccacgttgcc aataaagttg attgacttgt
    18661 cttccgccaa gagtttatag gcttcttggt gaactggcgt gcccttggta tcttccgtac
    18721 cgttgttcaa aagtcccaca cgaggttgtt tgacaccacg cacatgctcc gcgtaaaatg
    18781 agccaagaat accatactga tagaggtgat gagatgtatt ttcagcattt gcccccaagt
    18841 ccatcatatc aaatccctta ccgtccatag tcggcaaggt agacataaga ccaggacggt
    18901 cgatgttctt gatgcgaccg acgacaaaga cgcctgccgc caaaagagca cctgtatttc
    18961 cggctgataa gaccgcatct gcctgaccat ccttgacagc cttggtcgct aggaccatag
    19021 aagcctcttt cttacgacga atagccttga caggctcatc atctgaattg attttctccg
    19081 tcgtatggat gatgctgaca cgctctgtcg ctgtcaaata ctgatttatt ttagcctcat
    19141 caccataaag ttgaatttca atgtctggaa aggcagccaa ggcttgattg acaccttcta
    19201 ccactgcctg aggggcatgg tccccaccca tagcatctac tgcaatacgt ttcattctgt
    19261 ttcctcattt tctgttcttg gtttcataat ctgcccccaa gaagacaaat catctataaa
    19321 tttcttggat ttcaagtgaa tccccacata ttcctcgtac agctggtcaa taaaaagccg
    19381 taattttcgc ttcatctcag gcttgatgga aatggtttcc agctcatcaa aggaaatagc
    19441 ctgaaattga tcaagtagat agggaacatt gggatccaga taagcccgtc gctcatcttg
    19501 ttgataatgt tgcggacaca agacaccgct gtacttgtag gaatagtcga aaggcaagcc
    19561 aacccgatga caaaaagcac actcgtgaaa attcagactg atcccaaatc gtcccaagag
    19621 ttgaatttca aagatattgg tcaaaatttc atagtccaaa cccgactcca tcaaatctaa
    19681 ggtcttgacc aaaaatgcaa agagggctgg gtcataaacc ttatcctgca aggccgcatc
    19741 tgtcaaggcc aagatatagg tagcatagct aagcttgaaa atatcgccgt taatattctt
    19801 aaatggctgt acctgatgaa aatcttcgat ataagacaga ccatcatcat tgattttaac
    19861 gataaaatcc gcataggtca aaggctggat agaagctacc agcttggact tagaggcatg
    19921 tttcacgaaa aacattcgct tgccagcctt ctctgtaaaa atcttgacca gcttgtcatc
    19981 ttctcgaaaa ttccgattgt aaaggactaa tcccctagtt tcaattcgtt ccattttctt
    20041 ccagatattc cttcaaacga gccatggctg tttgaatttt ctccatactt gctgcatagg
    20101 aaattcgcac atagccttcc ccatactgac cgaaggccgc acccggaatt aaggccaccg
    20161 ctttctttct cgcaaagtct tgcaagaagc taaaggaatc ttgattgtaa cccacaggga
    20221 tttttgcaaa gatgtaaaat gctccatcag gcttgataat tttaaagccc aagtccgtca
    20281 tcttctcgat gatgtaatcc ctacgcttaa catactccgc ccgcattggc agagcatcat
    20341 ccttaccatt tttcaaggcc tcaaccgcac catactgcat agcagttgac gctgcagtca
    20401 cgagatattg gtggctcttg atgatttgag cgatgatgga agcctgactc ataatcaagc
    20461 caatccgcca acctgtcatg gcatgggact tggacaatcc ctgaatcaaa atggtctgtt
    20521 ctggcaaaaa ctccgcaatc gaagtatggg gctggccagt gtaagtcaac tccgcataga
    20581 cctcatctga taggacaaag acaggatact tacgcaagac atccgcaaag acctgaattt
    20641 gctcacgtga gtaggtcact cccgttggat tggcaggata gttgagaatg acagctttta
    20701 gcttatcccc ctgctcaata atcgcctctt ccaacatctc aggtgtcaac acaaaatcat
    20761 ttgccgtcgt atcgatttca acaatgtctg cccccaccat attgacaatc ggctcataac
    20821 caggataggc aggtgcaggt agaagtaccg tatccccagc ttccaaaata gcaactaaac
    20881 tcgctgatag agcttctgtc gcaccgattg tagagaggat ttcattttct ggattgtagt
    20941 gtaaattata tttttcagcc acaaactcag ctgccgcttg gcgcaactcc aaaagaccag
    21001 ccataccagt ataatagctc tggttagcat cgattgcagc cttagccgct tctttgacat
    21061 gatcaggcgt tgtaaaatca ggctctccca aggtcagttt caaaatccct ggaacatccg
    21121 aaatagactg atcaaactga cgaatcatcg aaacctcaat ccgattcaaa ttcttattaa
    21181 aacgatttaa taaatccatt ctgccacctc aaaaacatat aaaactatta taatacattt
    21241 tgaaaataaa tgtaaaaaag aagagtcatt tgactctcct catacctatt taacacgact
    21301 tgcctcaaac aaaggcgaca agggacgttt ttcatgaata cgaataatcg cttccgctaa
    21361 taattctgcc gttgaaatat gttcgatttt atcgattaag cgatcttctg caatttcaat
    21421 tgtatcaaga acaaccaatt tcttaattgc tgacttacta atgttatcca tagcaggccc
    21481 tgacaatact ggatgcgtac atgaagcata aacagctgtt gcccctgcat ctgccaaagc
    21541 atccgctgca tgacagatgg tacccgcagt atcaatcata tcatcaatca agatacaagt
    21601 tttatcctta atatctccaa taatgttcat cacttctgat gtattcatct tatcaacact
    21661 acgacgttta tcaataatag caatcggtgt cttcaagaac tgtgctaact tacgggcacg
    21721 tgtcacacca ccatggtcag gtgatacaac aacatagcca tcacctacca taccacgacg
    21781 ctcaaaataa tccgcaatca atggagcacc catcaaatga tcaacaggaa tatcgaagaa
    21841 tccctgaatc tgcgcagcat gcaaatcaat tgtcaacaaa cgattgaccc ctgctgtctg
    21901 caacatatta gctaccaatt ttgatgtaat tggttcccgt gcacgagcct tccggtcttg
    21961 gcgtgcataa ccataataag gcattactac gtttactgat tcagcagatg cacgtttaag
    22021 agcatcaacc ataatcaaaa tttccattaa attatcatta actggtgagc tagtggattg
    22081 aagaatgtac acatgagttc cacgaatgga ttcctcaata tttacctgaa tttcaccatc
    22141 tgaaaattga cgaacacttg attttccaag aggaattcct atttttttcg acacctgttc
    22201 agctaacttc tgatttgacg aaagagcgaa caattttaag tcagtaaacg ccatgacagc
    22261 ctcctatata tttctacctt tactatttta accctttttc cttcattttt caaacaaaaa
    22321 tagagcgcaa atccacacgc tctatttgaa aatttcttaa tatggagggt aaatgtagta
    22381 aactgctccc tcagaagtcg ttgttggatt gaaataacca ccacgatggt taccaatata
    22441 acgacgaccc atgtagtttg attcaacaac ttggatactt gttgaagatt gaacagccgt
    22501 aacaaccgct acgtgcccat aataaccacc tgtccaaaca gcaatcgcac ctacttgtgg
    22561 cgtagaacct gtactaaaac cttcagcacg tgctgatgct aaccactgct tagcatctcc
    22621 ccagtaagga ccaacccatg aaagttgaga tttaactccc caagtacact caccaactgg
    22681 gtatgatgaa gcgtcataac gcgcattatt tgctgccgct gaactacctg aacctgatga
    22741 tgtagacgtt gtaggtgtgc ttaccgttgg tgtagattgt gatactgtct gagtaggggc
    22801 tgcaaccgtt tcagtcactg tagtttctac tggcattgac acgactggtg ctgatactga
    22861 agctacttgt tgctgtgcta gagctgcctg ttgtgcttga tactccgctt gacgagctgc
    22921 cgcttgacga gctgcttctt ctgcagctgc cttttgcgcc aacaatgaat ttttctcatc
    22981 ttcagcagta gctttctgca cagccaaatt taacttagca gcttccaatt cagcctgacg
    23041 cacttgcaat acttgggcgt catcttccaa tttttggcga ttagctgcca aagtagtgat
    23101 tgcctcttgg tttgcctttt gtttttcaac aattgcttcc ttatcagctt tttgttgttc
    23161 caacatacgg ttattagctg aaacaatctc acgcattgca ttaacacgag aaacagcatc
    23221 aacgattgat tttgaatcta aaattgtatt aatataactt gaagcagagc catcaacttg
    23281 agcactacgc gcctgctcct ttaaagcacc atcacgtgac acaatatcag ctgacaaacg
    23341 ctcaatatct gccgccaatg tctgcgattc tgcttccaaa cgagtatttt cttctgttaa
    23401 tttcgcctgt tcactaacaa ttgcatcaac ttgtccttga atagcatcaa cttgttgttg
    23461 agcttcagct tgttgtgctg tcaactcact aatctgttga ttttttgctg caatctgact
    23521 atctacatca ttcgcactaa tcacagctac ataattagca ttagatagaa cgactgtact
    23581 taacataatt gtagccaaga tttttttctt catatccgaa cataactcct ctatactttc
    23641 tgactctctc attttatcaa aaaaattgcg taagtatatt acgcaattat tacatttcta
    23701 tgtcttgttt gttattccaa ataaacgctc aaataacggt tgtagtacga aaaataaggc
    23761 caaattgaat agtagacttg gaagtaattt attaaaaaca aagataaaca cagacaagtt
    23821 tgttatatga aaaatacgag caaatgagta actaataaat tcaaattgaa aaatagctac
    23881 tagtaaaatc aaaatattaa ttcctcgctt gctgacagca ccttgaaaga agaaatagat
    23941 gcagtacaaa actaaaggaa gagttgtagt agcaatacca atcagattaa gataactaat
    24001 atcatatacc aaacctagta aagtaaatat gaataatgaa aaaccaagag atacatagtt
    24061 agcataaaaa atagctaaca taagtaccaa atgacttgaa atagtaaata atccgaccga
    24121 ccaatttgtt accaacgttg aaatctgtcc atcaagtaat aaaataaaga acaagatggg
    24181 aaacatgaat atttctatca ttttattgcg catttgtttg acctaccact aaaaccgaat
    24241 aaatgtttga aaaactagct gtcggctcaa catatacttc tctatttaaa ctgttactat
    24301 ttgatttaac cgataaaact ttaccaattt ggacatttgc cggagtcgca ccagccaaat
    24361 cactcgttac aacattgcta cccactgcaa tttcatcagc tgagttcaac tgattaatga
    24421 taaaactatt tgtatctgca tcatagcccg ataaaatacc ataaatttct ttagaatcaa
    24481 cagaaatttt cacaggcaac ttcgtgaatt catccgaatt cgtaaataag gtaacaaccg
    24541 ccgaatctga actcaatgaa ctcacgattc caactaatcc accattagca accacaagtg
    24601 cattagaggt cacaccacta gtctcaccaa tattaattga aatatgctcc gaccacgatg
    24661 aaggagtcct cactaaaact gatcccggaa taagttgttt ttcaggaaaa tcagatacca
    24721 cacctaaact gctacgaagc gatgcattct cttctttcaa gctagtattt tcagcagcca
    24781 tcccttcaag gctcataata gattccttta attgtttatt ttcctcgtaa gcgttcatca
    24841 aatctgtcaa gacatctttc tgctcagaaa aaaatctagt aggtactgaa ataaccgatt
    24901 gaattggcgt tacaacaacc ctaacgatat catttaaata tggtacctgt aaccccttag
    24961 agaaagtcac aaacaaaaga gaaaatgaca gtaataaaaa gatagaaaca actactacta
    25021 attttgaaaa tttattcata atagaccctc accaagatac aataaaacga gaatatcaag
    25081 cgataatctc gttcactacg gagaataagg gattcgaacc cttgcgccag ttacccgacc
    25141 taacgattta gcaaaccgtc ctcttcagcc tcttgagtaa ttctccatca atataatatg
    25201 ggcacgagtg gaatcgaacc accgacctca cgcttatcag gcgtgcgctc taaccatctg
    25261 agctacgcgc ccaagataat aaacttggac aaagttaaat taatggcgcg agacggaatc
    25321 gaaccgccga cacatggagc ttcaatccat tgctctacca actgagctac cgagccaaat
    25381 tcttaaagaa attgcgggag caggatttga acctacgacc ttcgggttat gagcccgacg
    25441 agctacctag ctgctccatc ccgcggtagt agaaaaggag gatgtgggat tcgaacccac
    25501 gcacgctttt acacgcctga cggttttcaa gaccgttccc ttcagccgga cttgggtaat
    25561 cctccaataa tatggacctt gtaggacttg aacctacgac cgctcggtta tgagccgaga
    25621 gctctaacca gctgagctaa aggtccagca aacaagagta tatagcggcg aaggggatcg
    25681 aacccccgac ctcccgggta tgaaccggac gctctagcca gctgagctac accgccaaaa
    25741 taatataatc gggaagacag gattcgaacc tgcgacacct tggtcccaaa ccaagtactc
    25801 taccaagctg agctacttcc cgatactatt aaaaataaag ctcccctaac gtctccatta
    25861 agcgagtgat gcaccctaga ggattcgaac ctctaaccgc ctgattcgta gtcaggtact
    25921 ctatccagtt gagctaaggg tgctaactat tataatcttc atgccgagga ccggaatcga
    25981 accggtacga tgttgccatc gcaggatttt aagtcctgtg cgtctgccag ttccgccacc
    26041 ccggcctctc aaagcgaacg acgggattcg aacccgcgac ccccaccttg gcaaggtggt
    26101 gttctaccac tgaactacgt tcgcaatctt tcctaatgcc ggctacatga cttgaacacg
    26161 cgaccctctg attacaaatc agatgctcta ccaactgagc taagccggcc tatttctatt
    26221 ctatgcgggt taagggactt gaacccccac gcccgaaagc gccagatcct aaatctggtg
    26281 cgtctgccaa ttccgccaaa cccgcatatg actcgtgctg ggctcgaacc agcgacccat
    26341 tgattaaaag tcaattgctc taccaactga gctaacgagt cgtaaatatg acgcaaactc
    26401 tgtttgctct atttccaact tcaaatagtc tcccagacta tttgaacggt cccgacggga
    26461 atcgaacccg cgatcttcgc cgtgacaggg cgacgtgata accgctacac tacgggacct
    26521 atgggagtta acgggatcga accgctgacc ctctgcttgt aaggcagatg ctctcccagc
    26581 tgagctaaac tcccaatttg ctaagcgact accgtatcta acagggggca acccccaact
    26641 acttcaggcg ttctagggct taactgctgt gttcggcatg ggtacaggtg tatctcctag
    26701 gctatcgtca cttaactaat gagtcttgtc aactcaaaat tgaatatcta tattctaaca
    26761 agaaaccgaa cgcttgtcaa tattgactct agtttattt
//
LOCUS       DBNFCX010000023        25859 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.023, whole genome shotgun sequence.
ACCESSION   DBNFCX010000023 DBNFCX010000000
VERSION     DBNFCX010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 25859)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25859)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25859
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.023"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..561
                     /locus_tag="AC1PJC_000846"
     CDS             <1..561
                     /locus_tag="AC1PJC_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HIP6619849.1"
                     /translation="LSILTLIGTAIFLFWLYKIGILNDQNVLSDLIKSQGALGSLSFL
                     AIQIIQVVFPIIPGGVTTVVGFLVFHFWWGFFLNYLGISIGSIILFWLARRYGKKFCL
                     LFMSEDTFYKYESKIDNKRSYEIFFILCMLSPISPADIVVMITGLTSMSYRKFIMITL
                     LCRPFSVVAYSFFWIYGSQWLQQLLG"
     gene            complement(599..1474)
                     /gene="aguB"
                     /locus_tag="AC1PJC_000847"
     CDS             complement(599..1474)
                     /gene="aguB"
                     /locus_tag="AC1PJC_000847"
                     /EC_number="3.5.1.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001246759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0050126 - N-carbamoylputrescine amidase
                     activity [Evidence IEA];
                     GO_process: GO:0009446 - putrescine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-carbamoylputrescine amidase"
                     /protein_id="HIP6619850.1"
                     /translation="MRNVTVAAVQMKCSQDLWENLATAERLVRQAASQGAQIILLPEL
                     FERPYFCQERQYDYYNYAKSVEENDAVQHFIPIAKELQVVLPISFYEKDGNSLYNSIA
                     VIDADGSVLGVYRKTHIPDDHYYQEKFYFTPGNTGFKVWETRYAKIGIGICWDQWFPE
                     TARCLALNGAELLFYPTAIGSEPILDTDSQGHWQRTMQGHAAANITPVIAANRIGLEK
                     VQPSAENGGQSSSLCFYGSSFLTDETGDILTKVGREEEAVLLATYDLDMGARERLDWG
                     LFRDRRPHMYQQIVE"
     gene            complement(1580..2683)
                     /gene="aguA"
                     /locus_tag="AC1PJC_000848"
     CDS             complement(1580..2683)
                     /gene="aguA"
                     /locus_tag="AC1PJC_000848"
                     /EC_number="3.5.3.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0047632 - agmatine deiminase activity
                     [Evidence IEA];
                     GO_process: GO:0009446 - putrescine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase"
                     /protein_id="HIP6619851.1"
                     /translation="MIESPKVAGYRMPAEYEPHHGTLMVWPTRPGSWPFDGQGAKKAF
                     SQVIKTIAESEQVYLLVDEAHREEAQSMLGAGISYLDIPTNDAWARDTGPSVLVHENG
                     RALSVDWAFNAWGGSYDGLYQDYEADDQVASRFSQAIGLPVHDAHPFVLEGGAIHSDG
                     EGTIMVTESCLLSSGRNPHLTKDQIEQVLLDTLGAEKVLWLPYGIFNDETNEHVDNVA
                     AFVGPAELVLAWTDDESDPQYAMSKADLDYLEEQVDAKGRKLTVHKLPIPKHPILITE
                     EDLPGYVYEAGEEVRTAGERLAASYVNFYVSNGAVLVPQFADEHDAQALELLAQLFPT
                     RKVVGIPARDILLGGGNVHCITQQIPLYGAKCP"
     gene            complement(2680..3807)
                     /gene="nspC"
                     /locus_tag="AC1PJC_000849"
     CDS             complement(2680..3807)
                     /gene="nspC"
                     /locus_tag="AC1PJC_000849"
                     /EC_number="4.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001864914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0045312 - nor-spermidine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxynorspermidine decarboxylase"
                     /protein_id="HIP6619852.1"
                     /translation="MRIDQVPTPAYVIDEAKLVNNLEILKFVQDCTGCKVLLAQKAFS
                     MYATYPLISQYLAGTTASGLYEAKLGREEFGGEVHVFAPAFKDADLEEILEIADHIVF
                     NSERQLRKHVDKCRVAGVSIGLRINPECSTQDEHALYDPCATGSRFGVRIDQFSEDLL
                     DLVDGLHFHTLCEQNSDDLKTTLDAVEAKFGPYLHRIKWLNMGGGHHVTREDYDLDLL
                     ISSIQHMQETYGLEVYIEPGEAIALNAGYLVTEVLDIVENGIETLVLDTSATCHMPDV
                     LEMPYRPPLRHGSEAGERAFTYRLSSNTCLTGDIIGDYSFEKPVQIGDKLYFEDMAIY
                     SFVKNNTFNGIGLPSLVLMDQTGDCRIIKSFGYEDFKGRLS"
     gene            complement(3808..5067)
                     /locus_tag="AC1PJC_000850"
     CDS             complement(3808..5067)
                     /locus_tag="AC1PJC_000850"
                     /EC_number="1.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000088792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016646 - oxidoreductase activity, acting
                     on the CH-NH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0009085 - lysine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase family protein"
                     /protein_id="HIP6619853.1"
                     /translation="MSRLLVIGCGGVAQVAISKVCQAEDTFKEVMIASRTKSKCDDVK
                     AALEGKTSVKIETAQVDADKVEEVIALIESYQPKAVLNVALPYQDLTIMDACLATGVD
                     YIDTANYECEDTEDPEWRAIYEKRCAEEGFTAYFDYSWQWAYKERFEKAGLTALLGSG
                     FDPGVTSVFSAYALKHYFDEIHYIDILDCNGGDHGYPFATNFNPEINLREVSAPGSYW
                     ENGKWVEVEAMSIKREYDFPEVGQKDMYLLHHEEIESLAKNIPGVKRIRFFMTFGQSY
                     LTHMKCLENVGLLRTDPINFNGQEVVPIQFLKALLPDPASLGPRTVGKTNIGCIFTGV
                     KDGVEKTIYIYNVCDHQECYKEVGSQAISYTTGVPAMIGTKLVMDGTWKKTGVYNLEE
                     LDPDPFMDLLNQYGLPWQVVENPVLVD"
     gene            complement(5067..5924)
                     /gene="speE"
                     /locus_tag="AC1PJC_000851"
     CDS             complement(5067..5924)
                     /gene="speE"
                     /locus_tag="AC1PJC_000851"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HIP6619854.1"
                     /translation="MEMWFSEVQTPDVKLSIRTSQQLYAGKSEFQDIAVLDSPAFGKI
                     LTLNGRVLFSDADDFVYNEMAVHVPMAVHPNPKKILILGGGDGGVAQVLSMYPEIERI
                     DVVEPDELLVEVCRQYFPDYASGLEDERVEVYLQDGLRFLRNCENEYDIIINDATDPF
                     GHTEGLFTKEFYGNAYRALKEDGIMVYQHGSPFYDEDESAFRSMHRKATQSFPISRVY
                     QAHIPTSAAGYWLFGFASKKYHPIEDFDKKKWKARELFTEYYTANLHIGAFLLPRYVE
                     DILEEEEKK"
     gene            complement(5927..7375)
                     /locus_tag="AC1PJC_000852"
     CDS             complement(5927..7375)
                     /locus_tag="AC1PJC_000852"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HIP6619855.1"
                     /translation="MKNQHQAPIYQGLVQLRRKRIVPFDVPGHKRGRGNPELVELLGE
                     KCVGIDVNSMKPLDNLGHPVSIIREAEELAAEAFGASHAFLMVGGTTSSVQTMILATC
                     KAGDKIILPRNVHKSALNALVLCGAIPVYVDMSVEPRIGIALALENEAFERAISEHPD
                     AVAVLINNPTYYGICSDLRTLTEKAHAAGMKVLVDEAHGAHLHFSDQLPEAAMDVGAD
                     MAAVSMHKSGGSLTQSSLLLVGPEMNVEYVRQIINLTQSTSASYLLLSSLDISRRNLA
                     LRGKESFEKVIEMSEYARREINAIGGYYAYSKELIDGKTVHDFDVTKLSIYTQGIGLT
                     GIEVYDLLRDEYDIQIEFGDIGNILAYISIGDRLQDIERLVGALADIKRLYSRDGSDL
                     ISGEYIQPQLVLSPQEAFYAERESRSLQEAVGQVCGEFVMCYPPGIPLLAPGERVTQE
                     IVDYIIFAKERGCSVQGTEDPDVNFINVIKEV"
     gene            complement(7894..8217)
                     /locus_tag="AC1PJC_000853"
     CDS             complement(7894..8217)
                     /locus_tag="AC1PJC_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sulfur cluster assembly factor"
                     /protein_id="HIP6619856.1"
                     /translation="MTYTEDQIKDIQERIFHALEDVIDPELGIDIINLGLIYEIRFIE
                     GKAEIDMTLTTMGCPLADLITDQIHDVLKDVPEVTEVDVRLVWSPAWTVQKMSRYARI
                     ALGIK"
     gene            complement(8665..9783)
                     /gene="rpoD"
                     /locus_tag="AC1PJC_000854"
     CDS             complement(8665..9783)
                     /gene="rpoD"
                     /locus_tag="AC1PJC_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HIP6619857.1"
                     /translation="MTSKKDKKTEVTTFDVQVAEFIRNHKKQGSATDDEINDQLVIPF
                     TLDADGIDDLLQRIQDAGISIVDKEGNPSARAMQVEEEPELSDEELLGSTSAKVNDPV
                     RMYLKEIGVVPLLTNEEEQELALAVEAGDPEAKQRLAEANLRLVVSIAKRYVGRGMQF
                     LDLIQEGNMGLMKAVDKFDYSKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVET
                     INKLVREQRNLLQELGQDPTPEQIAERMDMTPEKVREILKIAQEPVSLETPIGEEDDS
                     HLGDFIEDEVIENPVDYTTRVVLREQLDEVLDTLTDREENVLRLRFGLDDGKMRTLED
                     VGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIED"
     gene            complement(9786..11576)
                     /gene="dnaG"
                     /locus_tag="AC1PJC_000855"
     CDS             complement(9786..11576)
                     /gene="dnaG"
                     /locus_tag="AC1PJC_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed RNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HIP6619858.1"
                     /translation="MLSKDKITEIKQALNIVDVIGETVALTKAGRNYVGLCPFHGEKT
                     PSFNVIEDKQFYHCFGCGKSGDVFKFVEEVRGVSFADAAAILAEKAGFQVDVTPSYHQ
                     EEKRVSPHQVLYDIHRDAAKFYHALLMTTKMGEEARAYLHQRGLTDDVIKTFQLGLAP
                     AEQNILYQKLSGQYDEESLLNSGLFNPSENNIIYDAFQARIIFPLADEYGRIVAFSGR
                     IWTEEDRNNKQLAKYKNSRSTAIFNKSYELYHLDKAKAVIKKQREAYLMEGFLDVIAA
                     HRVGIDNAVASMGTALTREHVAHLAKFCKKIVLTYDGDKAGQAATMKALDELQDFQVE
                     IVSLPDNMDPDEFLQKNSEEALQQVLTKSRISDVEFLIQYLKPENPDNLQMQIEFVDK
                     IAPIIAKVSSITAQNSYIYKVADLLSDFDYNQVEQAVNAVRLNQRQERTQQVFQSQTG
                     QSYLPPVQTIARITSLIRTENHLLYRMVEHPYILNEFRLREDFYFATPELQAIYDMLK
                     KSGEITSFELSQLNDSAQQAWYCMQEERLPNEVSPHEIEELEIRRDKELLKKENQHLA
                     RKIREHSHVGNADIALDELQKLLDRRRQME"
     gene            11758..12123
                     /gene="mscL"
                     /locus_tag="AC1PJC_000856"
     CDS             11758..12123
                     /gene="mscL"
                     /locus_tag="AC1PJC_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="large conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HIP6619859.1"
                     /translation="MLKELKNFLFRGNIVDLAVAVVIGGAFGAIITSFVDDIITPLIL
                     NPALKAANVQNIADLAWNGVKYGSFLSAVINFLIIGTSMFFVVKAAEKAMPKKVEEEA
                     PAGPTQEELLAEIRDLLKK"
     gene            complement(12211..13224)
                     /gene="galE"
                     /locus_tag="AC1PJC_000857"
     CDS             complement(12211..13224)
                     /gene="galE"
                     /locus_tag="AC1PJC_000857"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HIP6619860.1"
                     /translation="MSILVTGGAGYIGSHTVVELLKLGKEVVIVDNLSNSSILVLDRI
                     ETITGKRPTFYELDVADKEALRQVFENENIEAAIHFAGYKAVGESVAKPIMYYENNIM
                     STLALVEVMTEFSVKKIVFSSSATVYGLNNPSPLVETMPTSATNPYGYTKVMLEQILR
                     DVEVADKEWSIALLRYFNPIGAHESGLIGEDPAGIPNNLMPFIAQVAVGKREELSVFG
                     NDYDTVDGTGVRDYIHVIDLALGHIKALEKISTTAGVHTYNLGSGQGTSVLELVQAFE
                     KVNGVPVPYKIVDRRPGDVATCYANADKALAELNWKTEKTIEDMCRDTWNWQSKNPNG
                     YEG"
     gene            complement(13328..13504)
                     /gene="rpsU"
                     /locus_tag="AC1PJC_000858"
     CDS             complement(13328..13504)
                     /gene="rpsU"
                     /locus_tag="AC1PJC_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002884573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HIP6619861.1"
                     /translation="MSKTVVRKNESLDDALRRFKRAVTKAGTLQETRKREFYEKPSVK
                     RKRKSEAARKRKKF"
     gene            complement(13602..14231)
                     /locus_tag="AC1PJC_000859"
     CDS             complement(13602..14231)
                     /locus_tag="AC1PJC_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01906 family membrane protein"
                     /protein_id="HIP6619862.1"
                     /translation="MRTKLQIIGTILFVLSAAVLGTIYLAWLVYPLEISFLGLEKVVY
                     MKAADISYNFNILMNYLTNPFASVLDMPNFSSSADGLKHFADVKHLFHLTQGIFILTL
                     PAFVLFVKNILLKGYGDLVKKVIFWTMLTPMIIGLLGVLVGFDQFFVLFHTVLFPGDS
                     TWLFDPAKDPVIYILSQEFFLHCFVLFFVLYEFFFGTILAWTGKKNRIG"
     gene            complement(14221..14994)
                     /locus_tag="AC1PJC_000860"
     CDS             complement(14221..14994)
                     /locus_tag="AC1PJC_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004258500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01457 family HAD-type hydrolase"
                     /protein_id="HIP6619863.1"
                     /translation="MTYTGYLIDLDGTIYEGKKRIPAGERFIHRLQERQIPYLFVTNN
                     TTRRPEMVQAMLAENFNIETPLETIYTASLATVDYMNDLGKEKTVYVIGEDGLKSAIF
                     EAGYVEDTENPAYVVVGLDTQLTYEKLTIATLAIQKGATFIGTNPDLNIPTERGHLPG
                     AGSLIALLKAATRVEPTFIGKPEAIIMDKALEILGTERSQTVMVGDNYLTDIRAGIDN
                     GFPTLLVLTGFTKPEEVADLPLAPTHVLNSLDEWSFDEN"
     gene            complement(15004..15621)
                     /locus_tag="AC1PJC_000861"
     CDS             complement(15004..15621)
                     /locus_tag="AC1PJC_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase N-terminal domain-containing
                     protein"
                     /protein_id="HIP6619864.1"
                     /translation="MSQDKWLEWAVRLQALAQTGLAYGKDVYDMERFEEIRQIAAEML
                     VEPSGQPLEVVKDLFCNETGYQTPKLDTRAAIFQEDKILLVQENDGLWSLPGGWCDVD
                     QSVKDNVVKEVKEEAGLDVEALRVVAILDKHKNNPAKSAHRVTKVFILCRLLGGEFQP
                     NSETVASGFFSLDDLPPLYLGKNTAEQLALCLEASRSEHWETRFD"
     gene            complement(15608..16348)
                     /locus_tag="AC1PJC_000862"
     CDS             complement(15608..16348)
                     /locus_tag="AC1PJC_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP thioesterase domain-containing protein"
                     /protein_id="HIP6619865.1"
                     /translation="MGLSYQEEFTIPFDMVDVKQEIKLPDFISYCLGVSGRQSEELGR
                     SDLYVFQEFGLIWVVTDYELTIQRLPKYNETITIKTEAVAYNKFFCHRMFYIYDEAGN
                     LLLDILCYFVLIDFETRKVAPVPEALIAPYQSEQVKKLPRAPKYQLLEKPSVQEFPVR
                     YFDLDMNGHVNNGKYLEWMYEALGYDFLLCHVPKKIQLKYLKEVEATSLVSSRMVTKA
                     GVSQHEIVVDGHIHAQAVIEWRESHVAG"
     gene            complement(16361..17497)
                     /gene="hemW"
                     /locus_tag="AC1PJC_000863"
     CDS             complement(16361..17497)
                     /gene="hemW"
                     /locus_tag="AC1PJC_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003092450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HIP6619866.1"
                     /translation="MKKRPTSAYIHIPFCTQICYYCDFSKVFIKNQPVDEYLTALMEE
                     VKYYDLPALKTLYIGGGTPSALSADQLDYLLTNLEDILDLSQLEEFTIEANPGDLTAD
                     KIAVLKKSKCNRVSLGVQTFDDRMLKKIGRSHNQAQIYETIAALKEAGFHNISIDLIY
                     ALPGQTMEQVVDNVAKALELDIPHMSLYSLILENHTVFMNRQRRGNLHLPNEDVESDM
                     FDYILQELEKNGFEHYEISNFTKPGFESRHNLMYWDNSEYYGLGAGASGYIDGMRYRN
                     RGPIQHYLKSIREKGHSRLHEEFLSQTEQMEEEMFLGLRKKTGVSIERFEEKFGISFE
                     DRYGQVVRDLKNEGLLQEEDRWLRMTKKGLFLGDTVAERFIIED"
     gene            17610..18188
                     /locus_tag="AC1PJC_000864"
     CDS             17610..18188
                     /locus_tag="AC1PJC_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HIP6619867.1"
                     /translation="MNKERFYDVINAILSFLFCRWLFMTFLFYQFTTIFMTVDFWPTL
                     AAILLMTGFCFTLFRLVYKPHISRLTLWFFYACYGLLLVYLLFFKSMGVRGVNWDLLS
                     TFTQDLFLNPAILVFNLLLFLPLGLLFSFSWKKLSLFVGAILLVEACQFFFSLGFFDL
                     GDILLNTSGFALGNLLGQSAIAQSFKNRIQKK"
     gene            complement(18323..20591)
                     /gene="glgP"
                     /locus_tag="AC1PJC_000865"
                     /pseudo
     CDS             complement(18323..20591)
                     /gene="glgP"
                     /locus_tag="AC1PJC_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647058.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004645 - 1,4-alpha-oligoglucan
                     phosphorylase activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan family
                     phosphorylase"
     gene            complement(20767..21480)
                     /gene="deoD"
                     /locus_tag="AC1PJC_000866"
     CDS             complement(20767..21480)
                     /gene="deoD"
                     /locus_tag="AC1PJC_000866"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007519526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004731 - purine-nucleoside phosphorylase
                     activity [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HIP6619868.1"
                     /translation="MSIHISAKPGEIADKILLPGDPLRAKFIAENFLEDAVCFNEVRN
                     MFGYTGTYKGHRVSVMGTGMGMPSISIYAHELINEYGVKKLIRVGTAGSLNEDVHVRE
                     LVLAQAAATNSRMINIDWQEYDLPQIADFDLLDKAYHIAKELNMTTHVGNVLSSDSFY
                     SPKLFSRNLELGQLGVKAVEMEAAALYYLGAKFGVQTLAIMTISDSLVNPEEDTTAEE
                     RQNTFTDMMKVGLETLIAE"
     gene            complement(21513..22322)
                     /locus_tag="AC1PJC_000867"
     CDS             complement(21513..22322)
                     /locus_tag="AC1PJC_000867"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004731 - purine-nucleoside phosphorylase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HIP6619869.1"
                     /translation="MSLLAKINETKTFLEEKGLVKPEFGLILGSGLGELAQEVENAIV
                     IDYADIPNWGKSTVVGHAGKLVYGDLAGRKVLALQGRFHFYEGNPMEVVTFPVRVMKA
                     LGCEGVIVTNAAGGIGYGPGTLMAITDHINMTGQNPLIGENLEEFGPRFPDMSNAYTK
                     EYREKAHAVAEKLGIKLDDGVYLGVTGPTYETPAEILAFKTMGAHAVGMSTVPEVIVA
                     AHSGMKVLGISAITNFAAGFQSELNHEEVVEVTEQIKGNFKGLVKAILAEL"
     gene            complement(22334..22690)
                     /locus_tag="AC1PJC_000868"
     CDS             complement(22334..22690)
                     /locus_tag="AC1PJC_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase family protein"
                     /protein_id="HIP6619870.1"
                     /translation="MEKLTVYYNPGCSKCKKLRILLPSQDMEVKWVNYLETPLRGAEL
                     TALLEKMGSQPSAVIRLTEEERAELSEEEIFERLVEEPATLNRPIIEREQTAFLCRPL
                     EIIKEKMPEYDWSDYL"
     gene            complement(22690..23901)
                     /locus_tag="AC1PJC_000869"
     CDS             complement(22690..23901)
                     /locus_tag="AC1PJC_000869"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008973 - phosphopentomutase activity
                     [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA];
                     GO_process: GO:0043094 - metabolic compound salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HIP6619871.1"
                     /translation="MPKFKRVHLVVMDSVGIGAAPDSDKFFNAGVADTESDTLGHISE
                     KAGLEVPNMTKIGLGNIPRDTALATVPAESHPTGYVTKLEEVSLGKDTMTGHWEIMGL
                     NITEPFDTFWDGFPEEILTKIEEFSGRKIIREANKPYSGTAVIDDFGPRQMETGELIV
                     YTSADPVLQIAAHEDIIPLDELYRICEYARSITLERPALLGRIIARPYVGEPGNFSRT
                     ANRHDYAVSPFEATVLNKLADAGVPTYSVGKISDIFNGSGITNDMGHTKSNMHGVDVL
                     IDTLKLSDFEEGFSFTNLVDFDAVYGHRRNIEGYRDCLQEFDARIPEIIDNMREDDLL
                     LITADHGNDPSYAGTDHTREYVPLLAYSKAFKGSGVLPVGHFADISATVAENFGVDTA
                     MIGESFLSQLV"
     gene            complement(24229..24903)
                     /gene="rpiA"
                     /locus_tag="AC1PJC_000870"
     CDS             complement(24229..24903)
                     /gene="rpiA"
                     /locus_tag="AC1PJC_000870"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HIP6619872.1"
                     /translation="MTNLKEQVGIKAAEFVTDGMIVGLGTGSTAYYFVQEIGRRVAEE
                     GLQITGVTTSHATAEHAASLGIPLKNIDEVECVDLTVDGADEVDGDFNGIKGGGAALL
                     MEKVVAVNSKDCIWIVDESKVVQTLGAFKLPVEVVQYGAENLFRLFEKKGYRPSFRMR
                     NGEKHITDMQNFIIDLDLRRIEDTYALAEELDRTVGVVEHGLFIGLISKVIVGTPEGP
                     NIIEKK"
     gene            complement(24978..>25859)
                     /locus_tag="AC1PJC_000871"
     CDS             complement(24978..>25859)
                     /locus_tag="AC1PJC_000871"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000275945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0004527 - exonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent nuclease"
                     /protein_id="HIP6619873.1"
                     /translation="KEFRDAHKKTFGDEGMGRLLEGLATKISSVLKEQYGDGEVQFNF
                     GLPEIDNFFKTGSLLLSDNGISTPVSEKGTGMQRALALSLIQVYAGILENEEGILSKP
                     IMFFIDEPETFLHPKAQDKLIDSLNKISEKYQVFITTHSPYLLKKFDTRTQQINIFSK
                     KDDGVSSVSDKRELNLFGSSSPTIGEINYTAFGVNSVEFHNELYGFIQAKAIDEDEQN
                     YFENEFDKWLVTKGILQDKNYNRLNKNGSIISQPKTLPTLIRNVIHHPENQHNSYTIQ
                     ELNQSTELLLDVLKNLI"
BASE COUNT         7183 a         6018 c         5104 g         7554 t
ORIGIN      
        1 ttaagtattt tgacccttat cgggactgct atttttctgt tttggctcta taagattggc
       61 attttgaacg accaaaatgt cttaagcgat ttaatcaaaa gccaaggtgc tttaggtagc
      121 ctctcctttt tagctattca gattattcaa gttgtatttc cgattattcc gggcggtgtt
      181 acgactgttg tgggtttcct cgtatttcat ttttggtggg gattctttct caattatctt
      241 ggaatttcaa tcggtagcat catccttttc tggttggctc gtcgctatgg aaagaaattt
      301 tgtctcctct tcatgtctga agatacgttt tacaaatatg aaagcaaaat tgataataaa
      361 cgtagttatg aaattttctt tattctctgc atgctttctc ctatttctcc agctgacata
      421 gtggtgatga ttactggatt aacaagcatg agctatcgga aatttattat gattacttta
      481 ctttgtcgcc ctttctcagt tgtggcctat agcttctttt ggatctatgg cagccaatgg
      541 ttgcagcaat tattaggata aaaatgaaca cccttatctt cggacaaggg tgttttgttt
      601 attctacaat ctgctgatac atatgtggtc tgcggtctct aaagagtccc caatctaaac
      661 gttcacgcgc tcccatgtcc aagtcatatg tagcaagcaa gacagcttcc tcctcacgtc
      721 caaccttggt caaaatgtct cctgtctcat ctgtcaagaa agaggaacca tagaaacaca
      781 agctagaaga ctgtccacca ttttctgcag aaggctgcac tttttccaaa ccgatacgat
      841 tggctgcaat gactggggtg atattggctg ccgcatggcc ctgcatggtc cgctgccaat
      901 gaccttggct atccgtgtcc aaaatcggct ccgaaccaat agctgttggg taaaagagca
      961 attctgctcc gttcaatgcc aaacagcgag cggtttctgg gaaccattgg tcccagcaga
     1021 tgccaatgcc aattttagcg taacgtgttt cccagacctt gaatccagta ttgcccggtg
     1081 tgaagtaaaa cttctcctga taataatggt cgtcagggat atgagtcttg cggtaaactc
     1141 ccaaaacact accatccgca tcaataactg caatcgagtt atacaggcta ttgccatcct
     1201 tttcatagaa ggaaataggc aagacaacct gcaattcctt ggcaatagga ataaagtgct
     1261 gaacagcatc attttcttct acagacttgg catagttata ataatcatac tggcgttctt
     1321 gacaaaaata aggacgctca aagagttcag gcaggagaat aatctgcgct ccctgactag
     1381 cagcctgtct gaccaaacgc tctgcagtcg ccagattttc ccaaaggtcc tgactacact
     1441 tcatctggac agctgctaca gtaacatttc tcatattttc ttccttttca taaattcttt
     1501 atgggagata gaatgttcct gagataagga aagacggtac aggctatact agagtatgcc
     1561 aaaccgactt gacgcaatat cagggacatt tagccccata gagaggaatt tgctgggtga
     1621 tacagtgaac attcccacct ccaagtagga tgtcgcgggc gggtatgccg acgacttttc
     1681 tggtaggaaa aagctgcgcg aggagctcaa gtgcctgcgc atcatgctca tcagcaaact
     1741 gaggcaccag aaccgcaccg ttgctgacgt agaaattcac ataggaagcc gccaagcgtt
     1801 cgccagctgt ccgtacttct tcccccgctt cataaacata gcctggcaaa tcctcttctg
     1861 ttattagaat aggatgtttt ggaataggca gtttatggac ggtcaacttt ctgcccttgg
     1921 catccacttg ctcttccaag tagtccaaat cagccttgga catggcatat tggggatctg
     1981 actcatcatc tgtccaggcc aagaccagct cagctggacc gacaaaggcc gcaacattgt
     2041 ccacgtgttc attggtttca tcattgaaga taccataagg cagccagagg accttttcag
     2101 ctccaagagt atctagaagc acttgctcaa tctggtcctt ggtcaaatgg ggattgcgtc
     2161 ctgagctgag caaacaggat tcggtcacca tgatggttcc ttcaccgtcg ctatggatgg
     2221 ctccgccttc caggacaaag ggatgggcat catggactgg cagaccgatg gcctgactaa
     2281 atcgactagc cacctgatca tctgcttcat agtcctgata aagaccatcg tagcttccgc
     2341 cccaagcgtt aaaggcccaa tcgacagaca aagctctgcc attttcatgg accaaaaccg
     2401 acggacctgt gtcacgagcc cacgcgtcgt ttgtggggat gtccaggtag gaaatgccag
     2461 cccccagcat ggattgagcc tcctcacggt gtgcctcatc gaccaagaga tagacctgct
     2521 cgctttcagc aatggttttg atgacctggc taaaggcttt ttttgccccc tgaccatcaa
     2581 agggccagga accagggcgg gtcggccaca ccattagggt tccatgatgg ggctcatact
     2641 cagcaggcat gcggtagcca gccacttttg gactttctat catgacaacc tccccttgaa
     2701 atcttcatag ccaaagcttt tgataatccg acagtcgcct gtctgatcca tcaagaccag
     2761 acttggcaga ccgatgccat tgaaggtatt gtttttgaca aaggagtaga tggccatgtc
     2821 ttcaaagtaa agtttgtcac caatctgcac aggtttttca aaggaataat cgccgatgat
     2881 gtcgcccgtc agacaggtat tggaagacag tctgtaagta aatgccctct ctcctgcctc
     2941 agagccatga cgaagcggtg ggcgataggg catttccaag acatctggca tatggcaggt
     3001 agcagatgta tccaaaacca gagtctcaat gccattttca acaatgtcta aaacctctgt
     3061 caccagatag cctgcattga gggcaatggc ttcaccaggc tcaatgtaga cttctaatcc
     3121 ataggtttcc tgcatgtgct ggatagagga aatcagcaag tccagatcat aatcttctct
     3181 ggtcacatga tggccaccgc ccatattgag ccatttaata cggtgtagat aggggccgaa
     3241 tttggcctca acagcatcta aagtcgtttt caaatcatcg gaattttgct cacagagggt
     3301 gtgaaaatgc aggccatcca ccaagtccag caggtcttct gaaaactgat caatgcgaac
     3361 accgaagcga gaacccgttg cgcagggatc atagagggca tgctcgtcct gagtagagca
     3421 ttctggattg atccgcaggc cgatactgac tccagctact cggcatttgt ccacatgctt
     3481 gcggagctgg cgctctgagt taaagacgat atggtctgca atttccaaaa tctcctccaa
     3541 atccgcatcc ttaaaggctg gggcaaagac atggacttcg cccccaaatt cctcacgacc
     3601 cagcttggct tcatagagtc ctgatgcagt tgtgccagcc agatactgac tgatcagcgg
     3661 ataggtagca tacatggaga aggctttttg ggccaaaagt accttacagc ctgtacagtc
     3721 ttggacaaac ttgagaattt ctaaattgtt gaccagcttt gcttcgtcaa tgacataggc
     3781 tggtgttggg acttgatcta ttctcatcta gtccaccaaa accggatttt ctactacctg
     3841 ccaaggcaga ccatactggt tgagtaggtc cataaatgga tctggatcca attcttccaa
     3901 gttgtataca cctgtttttt tccaagttcc gtccatgact agcttggttc ctatcatggc
     3961 tggcacgcca gttgtgtaag aaatagcctg tgaacctact tccttgtaac attcttggtg
     4021 gtcacatacg ttgtagatgt agatggtctt ctccacaccg tctttgacac ctgtgaaaat
     4081 acaaccgatg ttggttttcc caacagtacg tggaccaaga ctagctgggt ctggcaataa
     4141 tgctttgagg aattggatag gcactacttc ttgtccgtta aagttgattg ggtcagtccg
     4201 caagagtcca acattttcca agcatttcat gtgggtcaga taagattgac caaaggtcat
     4261 gaagaagcga atgcgtttga cacctggaat atttttagcc agcgattcga tttcttcatg
     4321 gtggaggagg tacatatcct tctgccccac ttctgggaag tcatattctc gcttgataga
     4381 catggcttca acttccaccc atttgccatt ttcccagtag gaacctgggg cagaaacctc
     4441 acgcaggttg atttcaggat taaagttggt tgcaaatgga tagccgtggt ctccaccgtt
     4501 acagtctagg atgtcgatat agtggatttc atcgaaatag tgtttcaatg cgtaagcaga
     4561 aaatacactg gtcacacctg gatcaaatcc ggatcccaaa agtgctgtca gccctgcttt
     4621 ttcaaaacgc tccttataag cccactgcca tgagtagtca aagtaagccg taaagccctc
     4681 ttcagcacag cgtttttcgt agatggcccg ccattctgga tcctcggtgt cctcgcactc
     4741 gtagttagca gtgtcgatgt agtccacgcc agtcgccaag caggcatcca taatggtcaa
     4801 atcttggtaa ggcagggcaa cgttcaagac agcttttggc tggtaacttt caatcaaggc
     4861 aatcacttct tctaccttgt ccgcatccac ttgggcagtt tcaattttta cggaagtttt
     4921 tccttctaag gcagccttca catcatcaca tttggacttg gtacggctgg caatcatgac
     4981 ttccttgaag gtatcttctg cctggcaaac cttgctgatg gcaacttggg caactccgcc
     5041 acaaccaata actaacaaac gactcattat tttttctcct cttcttctaa aatgtcttct
     5101 acatagcggg gcaagagaaa tgctccgata tggaggttag ctgtataata ttctgtaaaa
     5161 agctcgcgcg ccttccattt tttcttgtca aaatcttcaa tgggatggta ttttttagag
     5221 gcgaagccaa acaaccaata acccgccgca gatgtcggaa tatgggcctg ataaacacgg
     5281 ctgataggga aggattgggt cgccttgcga tgcatggaac gaaaagccga ctcatcttca
     5341 tcatagaatg gcgaaccatg ttggtagacc ataatgccat cttccttcaa agctcggtag
     5401 gcgttgccgt aaaattcctt ggtaaacaat ccttccgtat gtccaaatgg atctgtcgca
     5461 tcattgatga tgatgtcata ctcattttca cagttgcgca agaaccgcaa accgtcctgc
     5521 aaatatacct cgacccgctc atcttcaagt cctgatgcat agtctgggaa atactgacga
     5581 cacacttcca caaggagttc atctggctct acaacgtcaa tacgttcgat ttcaggatac
     5641 atactgagaa cttgagcaac tccaccatct ccaccaccca aaatcaatat tttcttggga
     5701 ttgggatgaa cggccatggg cacatgaacg gccatttcgt tgtagacaaa atcatcggcg
     5761 tctgaaaaga gaacccgacc attaagggtc aaaatctttc caaaggctgg cgagtccaac
     5821 acagcaatat cctgaaactc actctttccg gcatatagct gctggctggt ccgaatggat
     5881 aacttgacat ctggtgtttg gacttctgaa aaccacattt ccatgactag acctccttaa
     5941 tgacattgat gaagttgaca tctggatctt ccgtaccttg gacggagcaa ccgcgctctt
     6001 tggcaaagat gatgtagtca acaatttcct gggtcactcg ttctccaggg gccaaaagag
     6061 gaatacctgg cggatagcac atgacaaatt ccccgcagac ctgaccaact gcttcttgca
     6121 gggaacggct ttcccgctct gcataaaagg cctcctgcgg tgacaaaacc agctgcggct
     6181 ggatgtattc tcctgaaatc aggtccgaac catctcgtga gtagagtcgc ttgatgtctg
     6241 ccagagctcc caccagccgc tcaatgtcct gcaagcggtc gccgattgaa atataagcca
     6301 agatattacc aatatcgcca aattcaatct ggatgtcgta ctcatcccgc aacaaatcat
     6361 agacttcaat ccctgtcaga ccaatgccct gcgtatagat ggagagcttg gttacatcaa
     6421 aatcatgcac cgttttacca tcaattaatt ccttggaata ggcgtagtag ccaccgatgg
     6481 cattgatttc acgacgagca tactcagaca tttcaatgac tttttcaaaa gactctttcc
     6541 cacggagagc tagatttctc cttgaaatat ctaagctaga caagagtaag taagatgctg
     6601 aggtagactg agttaagttg ataatttggc gaacatattc aacattcatt tcaggtccaa
     6661 ccaacaatag ggagctctgg gtcagactac ctcctgactt atgcatggaa acagcagcca
     6721 tatcagcccc aacatccata gccgcctctg gcaattggtc cgaaaaatgc aaatgcgcac
     6781 catgagcctc atcgaccaaa actttcatgc ccgctgcatg agctttctca gtcaaggtcc
     6841 gcaggtccga gcaaatacca tagtaggtcg gattgttaat caagacagca acagcatcag
     6901 gatgctcaga aatcgcccgt tcaaaagctt cattttccaa agcaagagca ataccaatcc
     6961 gtggctccac gctcatatcc acataaacag ggatggcgcc acaaagaaca agggcattga
     7021 gggctgactt atggacattt cgtggaagga taatcttatc gcccgcctta caggttgcca
     7081 aaatcatagt ctgcactgaa gaggttgttc ccccaaccat gagaaaggca tgactagcac
     7141 caaaggcttc tgccgccaat tcctccgcct ctcgaataat ggagacggga tgccctagat
     7201 tatccaaagg tttcatggaa ttgacatcaa tccccacgca tttttctcct aacagttcga
     7261 ccaactctgg attaccccgt ccccgtttgt gtcctgggac atcaaaggga acaatccgtt
     7321 tccggcgtaa ctgtaccaac ccctgataaa taggggcttg gtgttgattt ttcatatcga
     7381 aaaactcctt tgcttgatgg actcctaccc tttttttaaa agtaaaaaga gcagggttca
     7441 tcctgctcta caatccaaat cgacgctttt tattcttctc ttgagtttat gtgcctaccg
     7501 tttcctactc tccagtgcaa atatatacgt actttattga ccgtttcaca agatgacgtg
     7561 tgctttcacc acactaaatt tgatatacga attagggatg aaccctaaaa tcaacttata
     7621 aaatgtaggc ttttaaccct atcaataatg tggcttacgc cacgcttcgg cattcgaccc
     7681 gcctgtccgt aggctttggt tatgatcaat agcagagcta ctcatcccat ataggtctga
     7741 tatttgctag aataggtatg actacttttc ctaggcctgt ttattgtaac acggaaattt
     7801 gtctttgaca agtataattt ttaatatttt ttacaaaaaa atccaaacat taataaaaaa
     7861 atggcttcaa acgttcgaaa ccattttgtt tttttattta attcctaatg caattcgagc
     7921 ataacgactc attttttgaa cggtccaagc tggtgaccaa accagtctca catctacttc
     7981 tgttacttca gggacatcct tcaatacatc atgaatttga tcggtaatta gatcagctaa
     8041 tggacaaccc atggtcgtca aggtcatatc aatttcagcc ttgccctcaa taaatcggat
     8101 ttcataaatt agccctaaat tgataatatc aatacctagc tcagggtcaa tcacatcttc
     8161 aagagcatga aaaatacgct cctgaatgtc tttaatttga tcttctgtgt acgtcatttt
     8221 tctctctttc tttttcacaa gttcaatact agaaaagaaa caaaccaagt ttgtgtcaaa
     8281 aaatccactg aaccctcact cgtttccagt tttcagcgag cggttcaact cgccaaagtt
     8341 gagtgctttg aaaagctact caactaacgg caattcccaa tagaattgcc tagacgactt
     8401 actagtttct cacatcatta tggtcgaatg atatgagaaa cgtcgatcac ctcccccgga
     8461 gattagcctg ctttcttatt tctgggcagg cttcaacagt ctgggagact gttgaaggtt
     8521 ggagatgaag caaacgaagt ttgtgtcaaa acctccccga actctcgctc gtttccagtc
     8581 tgcagcgagc ggttaaaaag gttccccgaa ctctcgctcg tttcctgttt tcagcgagcg
     8641 gttgattttg tctcccagac aaaatcaatc ctcaataaag tctctgagtg gtttgctgcg
     8701 ggatgggtgg cggagtttac ggagggcttt ggcttcgatt tgtcggatgc gttcacgggt
     8761 tacgttaaag actttaccaa catcttcaag cgtacgcatt ttaccatcat ctaaaccaaa
     8821 acgaagacgc aatacgtttt cctcacggtc agtaagagtg tccaatacct catctaactg
     8881 ttcacgaaga acgacacgag ttgtgtaatc aactggattt tcaatgactt cgtcttcgat
     8941 aaaatctcca agatgactat catcttcttc accaattggg gtctcaagcg agacaggctc
     9001 ttgggcaatc ttgaggattt cacgaacttt ctcaggcgtc atatccatac gctcagcgat
     9061 ttgctcagga gttggatctt ggcccaattc ctgcaagaga ttgcgttgtt cacggaccaa
     9121 tttgttaatg gtttctacca tgtgaacagg gatacggatt gtacgcgctt ggtccgcaat
     9181 ggcacgagtg atagcctgac gaatccacca ggttgcatag gttgaaaact tgaacccttt
     9241 agagtagtca aacttatcaa cggccttcat caagcccatg tttccttctt ggataagatc
     9301 aaggaactgc ataccacggc cgacatagcg tttggcaatg gatacaacca aacgcaagtt
     9361 ggcttcagcc aaacgttgtt tcgcttctgg gtcacctgcc tcaaccgcca atgccaattc
     9421 ttgctcttcc tcgttggtca aaagaggtac aacaccaatt tctttcaaat acatgcggac
     9481 tgggtcgttc acttttgcag aagtgcttcc gagcaattct tcatcagata actctggttc
     9541 ttcctctacc tgcatagcac gagcagaagg gttcccttct ttatcaacaa tcgaaatccc
     9601 tgcgtcctga atacgttgga gcaaatcatc gattccgtca gcatcaagcg taaatggaat
     9661 aaccagttgg tcattgattt catcgtctgt agctgaacct tgttttttat ggttacggat
     9721 aaattcggca acttgtacat caaaagtagt tacttctgtt tttttatctt ttttacttgt
     9781 catatttact ccatttgtct tcttctatcg aggagttttt gcaactcatc gagggcaata
     9841 tctgcatttc ccacatggga atgttcacgg attttccgtg ctaggtgctg gttctccttc
     9901 ttcaacaatt ccttgtctcg ccgaatttct aattcttcga tttcgtgtgg agatacttca
     9961 ttaggtaaac gttcttcttg catacaatac caagcctgtt gagcggaatc gttcaactgt
    10021 gatagttcaa aactggtaat ttccccagat ttttttaaca tatcataaat agcttgcaat
    10081 tctggcgttg caaaataaaa atcttctcgt aaacggaact cattgagaat ataaggatgt
    10141 tcaaccatcc gataaagtaa atggttttct gttcgaataa gacttgttat acgagcaatc
    10201 gtttggactg gtggcaaata agactgacca gtctgtgatt gaaatacctg ttgtgttctc
    10261 tcctggcgct ggttcagacg aacagcattt actgcctgtt ccacctgatt ataatcaaag
    10321 tcagaaagta aatccgccac cttataaata taagaatttt gagctgtaat ggatgatact
    10381 ttggcaataa ttggtgcaat cttatctaca aactcaatct gcatttgtag attgtcagga
    10441 ttttcaggtt tcaagtattg aatcaaaaat tctacatcgc tgattcgtga cttagtcaaa
    10501 acctgttgca aggcttcttc cgaatttttc tgcaaaaatt catctgggtc catattatct
    10561 ggcaaactca caatttcaac ctgaaaatct tgtagttcgt ccaacgcctt catggtagca
    10621 gcctgtccag ccttatcccc atcataagtc agaacaattt tcttacaaaa cttagctagg
    10681 tgtgcaacat gctctcttgt caaagctgtt cccatggaag ccactgcatt atcaatccct
    10741 acacgatgag cagcaataac atctagaaaa ccttccatga gataggcttc acgttgcttc
    10801 ttaataaccg ctttagcctt gtccaaatga tacagttcat agcttttatt gaaaatcgca
    10861 gtactacgag agtttttata cttagctaat tgtttattgt ttcgatcttc ttcggtccaa
    10921 atccgacctg aaaaagctac aattcgacca tattcatccg ccaaggggaa aataatcctc
    10981 gcttgaaagg cgtcataaat aatattattc tcacttggat tgaacaaacc cgaattcaat
    11041 agactttctt cgtcatattg acctgatagt ttttggtaaa gaatattctg ttcggcagga
    11101 gctaagccta gctggaatgt ttttatgaca tcatctgtca agccacgttg gtgtagataa
    11161 gctctagctt cctcacccat tttggttgtc atcaaaaggg catgataaaa ctttgcagca
    11221 tcccgatgaa tatcatacag tacttgatgc ggactaaccc ttttctcctc ttgatgatag
    11281 gaaggagtta catctacttg aaaccctgcc ttctcagcta agatagctgc cgcatctgca
    11341 aaagaaacac cacgaacttc ttcgacaaac ttgaatacat ctccggactt accacatcca
    11401 aaacaatggt agaactgctt gtcttcaatc acattgaaag acggggtttt ctccccatga
    11461 aaagggcaaa gaccgacata attacgtccg gccttagtca aagcaaccgt ttcaccaata
    11521 acatcaacga tattgagagc ttgttttatt tcagtaattt tatcctttga aagcacattc
    11581 cctcctcata tcatactagc taatttaaaa agtgaacact cttcccttag tttaacatac
    11641 tctattgtat actaaatacg ggaaaatgta aaatttctaa aacaaattgc ttgtaaaata
    11701 tttttttatg ggtataatag ataaagtaaa atatttatga aaggacatat ttaggatatg
    11761 ttgaaagaat tgaaaaattt cttgttccgc gggaacattg ttgaccttgc tgtagcagtt
    11821 gtaattggtg gtgcgtttgg cgctatcatc acttcttttg ttgatgacat catcactccg
    11881 ttgatcttaa accctgcttt gaaagctgca aacgttcaaa acatcgctga tcttgcttgg
    11941 aacggtgtta aatacggtag cttcttgagc gctgttatca acttcttgat tatcggaact
    12001 tcaatgttct tcgttgttaa agcagctgag aaagcaatgc ctaagaaggt tgaagaggaa
    12061 gctccagctg gaccaactca agaagaattg cttgcagaaa tccgcgactt gttgaaaaaa
    12121 taatcaataa gatagtgaaa caggccctgt gcctgttttt cttttgcact atgacaaaaa
    12181 gaagatgtga gctaatactc acatcttttc ttatccttcg tatccatttg gatttttcga
    12241 ttgccagttc cacgtatcac gacacatgtc ttcaattgtt ttttctgttt tccagttgag
    12301 ttcagccaga gctttgtctg cattcgcata gcaggtcgct acatcacccg gacgacggtc
    12361 aacgatttta taaggtaccg gtacaccatt cactttttca aaagcctgaa ccagttctaa
    12421 aacactggtt ccttgaccag aaccaaggtt ataggtatgg acacctgctg tcgttgagat
    12481 tttttccaac gccttgatgt gaccaagagc caagtcaatg acgtggatat agtcacgaac
    12541 acctgttcca tccactgtat cataatcgtt accaaaaacg ctgagttcct cacgtttacc
    12601 aactgctacc tgtgcaataa acggcatcaa attattagga ataccagctg gatcttcccc
    12661 aatcaagcca gattcatggg caccgattgg attgaaataa cggagcaatg caatactcca
    12721 ctccttatct gctacttcca catcacgcaa gatttgttcc aacataactt tggtatagcc
    12781 gtacggattg gttgcgctag ttggcatagt ttcaaccaaa ggcgatggat tattgaggcc
    12841 ataaacagtc gcacttgagg agaagacaat tttcttaaca ctaaattctg tcatgacttc
    12901 taccaaagct agggttgaca tgatattgtt ttcatagtac ataattggct tagccactga
    12961 ttctcctact gccttgtagc cagcaaagtg aatggctgcc tcaatgtttt cattttcaaa
    13021 aacttggcgc aaggcttcct tatctgccac gtccaactca tagaaagttg ggcgcttgcc
    13081 agtgatggtt tcaatacgat ctaaaaccaa aatacttgag tttgaaagat tatccacgat
    13141 aaccacttct ttccccaact tcaacaattc gacaaccgta tgactaccaa tataacctgc
    13201 accacctgta actaagatac tcatctattt actccttttc acctggacaa aattctatat
    13261 cactattata tgttacctgt tgtaaaaagt aaacaaaaaa cagcctttcg gccgttttca
    13321 aattcaatta gaatttttta cgcttgcgag ctgcttctga tttacgttta cgttttacag
    13381 atggcttttc gtagaattcg cgtttgcgtg tttcttgaag agtaccagct ttagtaaccg
    13441 cacgtttgaa acgacgaaga gcatcatcaa gtgattcgtt cttgcgtact actgtttttg
    13501 acattttttt cactcccctc aatttcaaag tctttatcat tttactatga ttcaactcat
    13561 ttgtcaatat tttttaattc taaaatatga attttacgct cttatcctat cctattcttt
    13621 tttcctgtcc acgccagtat tgtcccaaag aagaattcgt aaaggacaaa aaataataca
    13681 aagcaatgca agaaaaactc ttgtgacaaa atatatatga caggatcctt tgcagggtca
    13741 aatagccatg tagaatctcc tggaaatagc accgtatgaa acaatacaaa aaactgatca
    13801 aagccaacaa gaactcctaa taaaccgatt atcattggcg taagcatggt ccagaaaatg
    13861 acctttttaa ccaagtctcc ataacctttt agcagaatgt tttttacaaa aagcacaaag
    13921 gcagggaggg tgaggataaa aatcccctga gttagatgga ataaatgttt cacatccgca
    13981 aaatgtttca gaccatcagc tgaggatgaa aaatttggca tgtctaaaac acttgcaaaa
    14041 ggatttgtta gatagttcat caggatattg aaattgtagg aaatatctgc cgctttcatg
    14101 tagaccactt tttccaaccc caaaaaagaa atctcaagcg gataaactag ccaagctagg
    14161 tagatggttc ctagaactgc tgccgataag acaaataaaa tcgttccgat aatctgtaac
    14221 ttagttctca tcaaaactcc attcatctag gctgttgagg acatgggtcg gagcaagggg
    14281 caagtctgct acttcttctg gcttggtaaa tccagtcagg actaaaagag ttggaaatcc
    14341 attgtcaatc cctgcgcgaa tatccgtcag gtagttatct cctaccataa ctgtctggct
    14401 gcgttctgtc cccaaaatct ccagagcctt gtccatgata atggcttcag gcttaccgat
    14461 aaaggtcggc tctactcggg tagcagcttt caaaagcgca ataagtgagc ctgctcctgg
    14521 caaatgacct ctttcagtcg gaatgttcaa atcaggattg gtaccgatga aggtagctcc
    14581 cttttgaata gccaaggtgg caatggtcag tttttcatag gtcaactgag tatccaaacc
    14641 gacaacaaca taggctggat tttccgtgtc ttccacataa cctgcctcaa aaatggcaga
    14701 cttgagcccg tcttctccaa tgacatagac tgtcttttcc ttgcccaaat cattcatata
    14761 atctactgtc gccagactgg ctgtatagat ggtttcaagc ggtgtctcaa tgttaaagtt
    14821 ttcagccaac atagcctgca ccatctcagg acggcgggtg gtattgttgg tcacaaataa
    14881 atagggaatc tgacgttctt gcaagcgatg aataaaacgt tcaccagcag gaatccgctt
    14941 tttcccttca taaatcgtac catccaaatc aatcaaataa cctgtatatg tcatttttcc
    15001 tccttaatca aatcgtgttt cccaatgctc agaccgacta gcttccaagc aaagggctaa
    15061 ctgctcagct gtatttttcc caaggtagag cggtggtaag tcatctagac tgaaaaagcc
    15121 actggcaact gtttccgaat tgggctgaaa ctccccgcca aggagacgac ataaaatgaa
    15181 gaccttggtc acgcggtggg ctgacttggc aggattgttc ttgtgcttgt ccaaaatcgc
    15241 aacgactcgc agagcctcca catccagacc cgcttcttcc ttgacctctt tcaccacatt
    15301 gtccttgacg gactggtcca catcgcacca accacctggt aaggaccaga gcccatcgtt
    15361 ttcctgaacc agtaggattt tatcctcttg gaaaatagct gcgcgggtat ccagcttggg
    15421 tgtctgatag cctgtttcat tgcaaaacaa gtctttcacc acttccaagg gctgcccaga
    15481 cggttctact aacatctccg ccgcaatctg tctgatttcc tcaaatcgtt ccatgtcata
    15541 aacatctttt ccataggcca agcctgtctg agccaaggct tgtaaacgta cggcccattc
    15601 caaccactta tcctgcgaca tgactttccc tccattctat gacagcttgc gcatggatat
    15661 gtccatctac cacaatctca tgctggctga caccagcttt tgtcaccatg cgtgaactca
    15721 ccaagctagt cgcctctacc tccttgagat acttgagttg gattttttta ggaacatggc
    15781 agagcagaaa atcatagccc agtgcttcat acatccattc caaatacttg ccattattga
    15841 catgaccatt catgtccaag tcaaaatagc gaacagggaa ttcttggaca gatggttttt
    15901 ccaagagttg atacttggga gcccgtggca atttcttgac ctgctcagac tgataaggag
    15961 caatcaaggc ttctggcaca ggcgccacct tgcgagtttc aaaatcaatc aggacaaaat
    16021 aacagagaat atccaacaaa agattgcctg cttcatcgta gatatagaac atccgatgac
    16081 agaaaaactt gttgtaggca accgcttctg tcttaatggt aatggtttca ttgtacttag
    16141 gtaaacgttg aatagtcagc tcatagtctg tcacgaccca aatcaagcca aattcctgaa
    16201 aaacatagag gtcactgcga cctagttctt ccgactgccg acctgacaca ccaagacagt
    16261 aggaaataaa gtcaggcagt ttgatttctt gtttgacatc caccatatca aaaggaatgg
    16321 tgaactcttc ttggtagctt agtcccattg tgtcctcttt ctaatcttct ataatgaaac
    16381 gctcggcaac tgtatcgcct aaaaacaatc cctttttagt catccgaagc caacggtctt
    16441 cttcttgtaa aagaccttca tttttcaagt ctctgaccac ctgaccgtag cggtcttcaa
    16501 aggaaatgcc aaacttttcc tcgaatcgct caatggatac gccagttttt ttccgtagcc
    16561 ctaaaaacat ctcttcttcc atctgctcgg tctggctgag gaattcttcg tgtaagcggg
    16621 aatggccttt ttcgcggatg gacttgaggt agtgctggat aggcccacgg ttgcgatagc
    16681 gcatgccgtc gatgtagcct gaagcccctg cacccaatcc gtaatactcg gagttgtccc
    16741 agtacatgag attgtggcgg ctttcaaagc cgggcttggt gaagttggag atttcgtagt
    16801 gctcaaagcc gtttttctcc aactcctgaa ggatgtagtc gaacatatcg gactccacat
    16861 cttcgttggg cagatggagg ttgccacggc gttgacggtt catgaagacc gtgtggttct
    16921 ccaaaatcaa gctgtaaagg ctcatgtggg gaatgtccag ctccaaggcc ttggcgacat
    16981 tatcgaccac ttgctccatg gtctgaccag gcagggcata aatcaggtcg atggaaatgt
    17041 tgtggaaacc cgcttcctta agggcagcaa tggtttcata aatctgggct tggttgtgac
    17101 tacggccgat ttttttcagc atacggtcgt caaaggtctg gacccccagc gacactcgat
    17161 tgcacttgga ctttttcaga accgcaatct tatccgccgt caagtcacct ggattggcct
    17221 caatagtgaa ctcttccagt tgcgacaagt ccagtatgtc ctccagattg gtcaaaaggt
    17281 aatccaactg gtctgccgag agagccgacg gtgttccgcc tccaatatag agggttttga
    17341 gggctggcag gtcgtaatac ttgacctctt ccatgagggc tgtcaaatac tcgtcaacag
    17401 gctggttctt aataaagacc ttggaaaaat cacagtagta acaaatctgg gtgcaaaatg
    17461 gaatgtgtat ataggcagat gtcggtcgtt ttttcatacc aactattata gcacactgtc
    17521 tacaaaaata ttttttacag ccatcacttc cccctcaaaa caatgatata atatagtaaa
    17581 cttacaaaat ctacaaaagg gattaaatca tgaacaaaga acgattctat gatgtcatca
    17641 acgctatctt atcattctta ttctgccgct ggctctttat gacctttctt ttttaccagt
    17701 tcacgaccat tttcatgacg gttgattttt ggccgacact tgccgcaatc ctgttaatga
    17761 ccggattttg ctttacccta tttcgacttg tctataaacc ccacatttcg cgactgacac
    17821 tttggttttt ctacgcttgc tacgggcttc tgctagtcta tcttctcttt ttcaaaagca
    17881 tgggcgtcag aggtgtcaac tgggatctcc ttagcacttt tactcaagac ctatttctca
    17941 atcctgctat attggttttt aacctcttac tctttttacc acttgggttg cttttttcat
    18001 tttcttggaa aaaactttct ctctttgtag gtgctatttt actggttgaa gcttgtcaat
    18061 tcttcttttc actgggcttc tttgaccttg gcgacatctt gcttaacacc tctggctttg
    18121 cccttggaaa ccttttggga caatctgcaa tcgctcaatc ttttaaaaat agaatacaga
    18181 aaaaatgacc ccgcaaggtc atttttagtt tatttatact caatgaaaat caaaagtagc
    18241 ctaggaaacg aagccgacga tagaactgaa gtttatctag gctcttgaca acggataatt
    18301 ttgattttcg aagagtatta gcttacttaa cttccaaatg ccagatgtct tcgttgtact
    18361 gttggatagt acggtctgac gagaagaaac ctgctttagc gatgttgacg atgacttttt
    18421 ccaaccagct gtcgcgatct tcgtagtctg ctaacatctg ctctttagtc gagatataat
    18481 cttccaaatc aagcaaggtc atgaagtggt cattgtgctt aaggttgtcc tgcaaacgcc
    18541 agagacgctc atcgattcca ccagcatgac gaatggtatc tgatgtaata aagtcaatca
    18601 atgggcgaat ggcttcacgt tcgtagaagg aatatggatg gtaggtccca tttgcatagt
    18661 gttcgataac tgtttggcta tcttgaccaa agatataaat attttcatca cctaccaact
    18721 catgaatttc cacattggcc ccatcatctg taccgatggt caaggctccg ttgagcatga
    18781 atttcatgtt acctgtacca gaagcttctt tggatgcaag ggaaatttgc tctgaaatat
    18841 ctgccgctgg aataatataa ctcgcctcgg ttacgttata gttttcaatc ataacgagtt
    18901 gcaagtgtgg cgccacatca ggatcatttt taatcacctg tgacaatacc aaaatcaaat
    18961 gaatgatgtc ctgtgcggtt gtgtaagcag gtgcagcctt tccaccaaag aaaactgtta
    19021 atgggcgggt agggatgttg cctgctttaa tatccagata cttatagata acataaagaa
    19081 cattcatctg ttgacgcttg tactcgtgca ttcgcttgat ttgtacatca aagatggatt
    19141 ctggattaac atgaacacct tgtgtcttgg caatatggcg ctgcaatttg cgtttattat
    19201 gctgctttgt cttttccaac caagatttca attccttatc atttttgtaa tccaacagct
    19261 tttcaagttt acttgcatcg tgatggtaac catgtccaag taggccgtcc aggtagcttg
    19321 ccaaacttgg attagcatgc atgagccagc gacggaaggt aatcccattt gtcttattat
    19381 tgaatttttc aggatatagc tcatagaaag ctttcaactc tgaagttttc aagatctctg
    19441 tatgaagtgc cgccacccca ttgatggaat aaccataatg aatatccatg tgtgccatgt
    19501 gaacacggcc atgttcatcg atgatattga cagcaggatc atccttcact tctttggcac
    19561 gacgatccaa ttctacgatg aacggtacca agtgcggaac cacatagttc agaaaatcaa
    19621 gcggccattt ttccagcgcc tctgacaaga tggtatggtt ggtataagca gtcattttct
    19681 taacaatttc aactgcctca tcaaacgaaa taccacgaag ctccaaaagg cgaatcaatt
    19741 ctggaataac aagtgatggg tgagtatcgt tgatttgaac aacggcataa tcaggcaggt
    19801 catgtaagtt tgatccctta gcaaccgctt cgtcaatcaa tagttgcgca gcgttagaga
    19861 ccatgaaata ctgctggaag atgcggagaa cttttccttc atcggtcgaa tcatctggat
    19921 agaggaagag ggtcaagttt cggaaaatat cttccttatc aaattctatt ccatcataaa
    19981 tgatattgtc atcaactgaa ccaaggtcaa acaagcgaag acgattcttg cgttccattt
    20041 ttataaccag gtacatcgat gtcatacaac ttagatgtca aggtaaagtt agcaaatggc
    20101 acctgataag aaatcggtga ctctgttaac catgaacgtg gtgtaatcca ctcatttggc
    20161 acagcagact gctgatggta ttcgaataat tgtctaaaca gtccaaagtg ataattcaag
    20221 ccgaccccat caccgttaag acctagacta gcaattgaat caaggaagca ggcagccaag
    20281 cgccccaaac ctccattacc aagagacggt tcaagctcca tgtcttcaat agcaatcaaa
    20341 tccttaccag ccgccaccaa ctggctttta acctcatcat aaagaccaag gttgattaaa
    20401 ttattagaca agagcttacc aattaagaac tctgctgaaa tatagtagac ctttttcttt
    20461 tggtcatttg tatacttagc ttcactctgc tgttttgtaa aagcaagcaa ggcataatag
    20521 agttcttggt ctgtacaatc ttcaatgcac ttggcataca tagactgaac aaaattttgt
    20581 aaattaatca tgagggctct cctaaatata ttaatgtaat cattcagaaa ggtttcgctt
    20641 cacctttgta aacgttttct taattatacc ctatttataa aaaaaagaca agccaacttc
    20701 cgtacaaata gaaattggtt cgtcttttaa acgattgcag gttactacaa tcagaattat
    20761 tcttaattat tctgcaatca gagtttccaa accaactttc atcatatccg tgaaagtatt
    20821 ttgacgctct tctgctgtgg tgtcttcctc tggattaacc aagctatctg aaatcgtcat
    20881 aatggcaagc gtttgaacgc caaacttagc acctaggtaa taaagtgcag ctgcttccat
    20941 ttctacagcc ttgacaccta gttgacctaa ttctaagttg cgactaaaca attttggaga
    21001 atagaaacta tctgatgata aaacattgcc aacatgcgtt gtcatgttga gttctttggc
    21061 gatatgataa gccttatcta aaagatcaaa atcagcgatt tgtggcaaat cgtactcttg
    21121 ccagtcaata ttgatcatac gagagttggt cgcagctgcc tgagccaaga ccaattcgcg
    21181 gacatggaca tcctcgttca aagaacctgc tgttcccaca cgaattagtt ttttcacacc
    21241 atattcgtta atcaattcat gggcatagat agagatggat ggcattccca tacctgttcc
    21301 catgacagag acacgatgac ccttgtaggt acctgtgtag ccgaacatat tgcgaacttc
    21361 gttgaagcaa acggcatctt caaggaagtt ttcagcgata aatttagcac gaagcggatc
    21421 accaggaagc aaaatcttat cagcgatttc gcctggtttt gcggaaatat ggatagacat
    21481 gtattttacc tctttgttct attttcgaat gcttacaatt cagccaaaat agccttgacc
    21541 aagcctttga aattgccttt gatttgctcg gttacttcta caacttcttc gtgattgagt
    21601 tcagattgga aaccagccgc aaagtttgtg atagcagaaa tacccaagac tttcatgcct
    21661 gagtgagctg ccacgataac ttctggtact gttgacatac cgactgcgtg ggcacccata
    21721 gtcttgaagg ccaagatttc agcaggtgtt tcataggtag gacctgtcac accgaggtag
    21781 acaccatcgt ccaacttgat acccaatttt tccgcaacgg catgggcttt ttcacggtat
    21841 tctttagtgt aggcattgga catatctggg aatcgtggac caaattcttc caagttttcg
    21901 ccaatcaagg gattttggcc agtcatgttg atgtggtctg taatagccat aagggtacct
    21961 ggaccgtagc cgataccacc cgcggcattt gttacaatca cgccttcaca accaagagct
    22021 ttcatgacac ggactgggaa agtcacgacc tccataggat tgccttcgta gaaatggaaa
    22081 cgaccttgaa gagctaagac cttacgtcct gccaaatcac cgtacaccaa cttcccagcg
    22141 tgaccaacaa ctgttgattt accccagttt ggaatatctg catagtcgat gacaatggca
    22201 ttttcaactt cttgggccaa ttcacccaag ccagaaccca aaatcaaacc gaattcaggt
    22261 tttaccaaac ctttttcttc caagaacgtt tttgtttcat tgatttttgc aagtaaactc
    22321 atattttctc cttttataaa taatccgacc agtcatattc tggcattttt tctttaatga
    22381 tttcaagcgg acgacagagg aaggctgtct gctctcgctc gataatgggg cgattgagag
    22441 tggcaggctc ttccactaaa cgctcaaaga tttcttcttc agacaattct gctcgttcct
    22501 cttccgtcaa tcgaatgact gctgaaggtt gactgcccat tttttccaag agagctgtca
    22561 attcagctcc ccttaatggc gtttccaaat aattaaccca cttgacttcc atatcctgac
    22621 tgggcagcaa tattcttaat tttttacact tgctacagcc aggattgtaa tagaccgtta
    22681 gcttctccat taaaccaact gtgataagaa gctttcgcca atcatggctg tgtccactcc
    22741 gaagttttcc gcaacggttg ctgaaatgtc cgcaaaatgg cctactggca agacaccgct
    22801 acctttgaaa gccttgctgt atgctaagag tggcacatat tcgcgtgtgt gatctgttcc
    22861 agcataggat ggatcatttc cgtggtcagc tgtaatcaag agcaaatcat cttcacgcat
    22921 attgtcaata atctctggaa tacgtgcatc aaactcttgc aaacaatcgc ggtagccttc
    22981 gatattacga cggtgaccat acacagcatc aaagtcaact aagtttgtga aggagaaacc
    23041 ttcctcgaag tctgataact tcagagtatc aatcaacaca tcgacaccgt gcatgttgga
    23101 cttggtgtga cccatatcat ttgtaatacc tgaaccattg aaaatatcac tgattttacc
    23161 aactgagtaa gttggtacac ccgcatctgc cagtttgttg agtactgttg cttcaaacgg
    23221 tgatactgca tagtcgtgac ggttggcagt tcgtgagaaa ttgcctggct caccaacgta
    23281 tggacgggca ataatccgac caagaagagc tggacgttca agggtaatgg aacgagcgta
    23341 ttcacagata cgatacaact catcaagtgg aataatgtct tcatgggctg caatctgaag
    23401 cacagggtct gcggaggtat agacgattaa ctccccagtt tccatttggc gagggccaaa
    23461 gtcatcaatg acagctgtac ctgaatacgg cttgtttgct tcgcggatga ttttacgacc
    23521 tgagaattct tcaatttttg tcaaaatctc ttcagggaaa ccatcccaga atgtatcaaa
    23581 tggctcagta atattgagac ccataatttc ccagtgtcca gtcatggtat ccttgccaag
    23641 cgatacttct tccaacttgg tcacgtaacc agttggatgg ctttcagcag gaactgtcgc
    23701 aagcgctgta tctcgaggga tatttccaag accaatcttg gtcatattag gtacctcaag
    23761 cccagctttt tcagaaatgt ggccgagagt gtcagattct gtatctgcta cacccgcatt
    23821 gaaaaattta tctgagtctg gtgctgcgcc gattccgaca gagtccataa ctaccaagtg
    23881 aacacgttta aatttaggca taattgtctc ctttatttga atagttagat tcaaccaaaa
    23941 tcaacgtcca accaagttgc tagactggaa attatcgtta ccacatctaa acattttaat
    24001 ggggtgcaat acttatacag tcaaagctct cggtatcaaa cttcttaacc atcaaaacta
    24061 gatactgtta ctcgcttcac cgcctgctgt tcagctatcg ctttttcagt acctatcatc
    24121 tgactgctac gaggtaaggg gatggatttt tgaagagtct aaacgttcgt gttttcatta
    24181 taccataaaa acgcctctca ttgtaccaaa atgagaagcg ttttcaattt atttcttttc
    24241 gatgatgttc ggtccttctg gtgtaccaac aattaccttg gaaatcaatc caataaagag
    24301 accgtgttct acaacaccga cggtccgatc caattcttcc gccaatgcat atgtgtcttc
    24361 tattctgcgt aaatcaaggt caatgataaa gttctgcata tccgtgatat gtttttctcc
    24421 attacgcata cgaaaacttg gacgataccc ttttttctca aatagtcgga aaagattttc
    24481 cgcaccgtac tgcacgactt ccaccggcaa cttgaaggct cctagggttt gaaccacctt
    24541 agactcatcg acaatccaga tgcagtcctt gctattgact gctaccacct tctccatgag
    24601 aagcgctgca ccaccgcctt taatcccatt gaagtctcca tcaacctcat ctgctccatc
    24661 caccgtcagg tccacacact cgacttcgtc gatatttttc aggggaatcc caagggacgc
    24721 agcatgttct gccgtagcat gagaggtcgt tacgcctgtg atctgcaagc cctcttccgc
    24781 aacccggcga ccaatctcct gcacgaaata gtatgccgtc gaaccagttc ccagcccaac
    24841 aatcatcccg tccgtcacaa attccgccgc cttaatccca acctgctctt ttaggtttgt
    24901 catttttgtc tcctttgaaa tcattcatga aataattata ccacatctct aaattaagaa
    24961 taaggctaat aaatgattta tattaaattt ttcaaaacat ctagaagtaa ctcagtggac
    25021 tgatttagct cttgtatggt atagctatta tgttgattct ctggatgatg aataacattt
    25081 cttattagcg taggaagtgt tttaggttga cttatgatac tgccattttt attcaaccga
    25141 ttatagttct tatcttgtaa aattccttta gttactagcc atttatcaaa ttcgttctca
    25201 aagtaatttt gctcatcttc atcaatcgct tttgcttgaa taaatccata tagttcattg
    25261 tgaaattcta cactattaac cccaaaagcg gtatagttta tctctccgat cgtcggtgat
    25321 gaagaaccaa ataagtttag ctctcgttta tccgaaacag aactcacccc atcatccttc
    25381 tttgaaaaaa tattgatttg ttgagttcta gtatcaaact tctttaataa gtaaggagaa
    25441 tgagttgtaa taaaaacttg gtatttttca gaaattttat tgagggaatc tattaattta
    25501 tcctgtgcct taggatgtaa aaatgtttcc ggctcatcaa taaaaaacat aatcggctta
    25561 gataatatac cctcttcatt ctcaagaata ccagcataaa cttgaattaa acttagagca
    25621 agtgcacgtt gcattccagt acctttttct gaaactgggg tagaaattcc attatccgaa
    25681 aggagcagac tacctgtttt aaagaaatta tcaatttctg gtaatccgaa attaaattga
    25741 acttcaccat ctccgtactg ctcttttagt actgaagaaa ttttagtcgc aagcccttca
    25801 agaagcctgc ccatcccttc gtctccaaaa gtctttttat gagcatctcg aaattcttt
//
LOCUS       DBNFCX010000024        25222 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.024, whole genome shotgun sequence.
ACCESSION   DBNFCX010000024 DBNFCX010000000
VERSION     DBNFCX010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 25222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25222
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.024"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..237)
                     /locus_tag="AC1PJC_000872"
     CDS             complement(<1..237)
                     /locus_tag="AC1PJC_000872"
                     /inference="COORDINATES: protein motif:HMM:NF024783.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HIP6619874.1"
                     /translation="MAASKSKRSRREFFKNNIAVNEKDFPSDEFEVHHVIEWAEIDEE
                     NHLSRQKIDTYKNMFLLSKEVHKEITRKTNSSRAS"
     gene            complement(357..716)
                     /gene="rsfS"
                     /locus_tag="AC1PJC_000873"
     CDS             complement(357..716)
                     /gene="rsfS"
                     /locus_tag="AC1PJC_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HIP6619875.1"
                     /translation="MKELDLVKVVVQAADDKRAEDLVVIDVQGVTSLTDYFVIASSMN
                     SRQLEAIAENIREKVAEVGNKGSRVEGDSNGGWVLLDLGGVVVHIFSEEMRDLYNLEK
                     LWHEGSFLEVAELLEEE"
     gene            complement(718..1227)
                     /locus_tag="AC1PJC_000874"
     CDS             complement(718..1227)
                     /locus_tag="AC1PJC_000874"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase family protein"
                     /protein_id="HIP6619876.1"
                     /translation="MKSALLVIDIQHLPVEGKPYGIENRLRLWQDSLAQARKAGLEVI
                     HVRHHDEELVKGTADWEIHSTVAPLASEKIFDKTFNSAFKETGLHAYLQEKGIEQLII
                     MGMATNFCIDTTIKVAFELGYKVAVIQDGTTTGYSGKLDAKDLIDHYQNIWSWNFAQV
                     DTLENIIRG"
     gene            complement(1224..1679)
                     /locus_tag="AC1PJC_000875"
     CDS             complement(1224..1679)
                     /locus_tag="AC1PJC_000875"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003049059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIP6619877.1"
                     /translation="MIVLKPVDEISYQAVLDLTVAEADKGFVAPNVRSLADAWLYRMN
                     GDVFPYAIWADEQVVGFALIDIDEDIQQYMLWRFMIGQEFQGKGYGQAALEAVIQLAQ
                     KHPVCNHLIVSYVKGNQKMARLLEKNGFVLDLEEERELVFRLETPGVKF"
     gene            complement(1676..2269)
                     /gene="yqeK"
                     /locus_tag="AC1PJC_000876"
     CDS             complement(1676..2269)
                     /gene="yqeK"
                     /locus_tag="AC1PJC_000876"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
                     YqeK"
                     /protein_id="HIP6619878.1"
                     /translation="MIAADLTFDRQALLEKIRVAMKPARFHHVLGVEQAALALADQYG
                     CDPKKASLAALLHDYAKEVEDQVFLDLIAKYDLDRDLLNWDNNIWHGVVGAYKIAEDF
                     GLKDEEIFQAIQRHTIGAGQMTLLDKVLYVADYIEPNRDFPGVDEARRIAKESLDKAV
                     AYETAQTISYLAKKGIPIYPQTLETYNGYVSWLKEQE"
     gene            complement(2266..2898)
                     /locus_tag="AC1PJC_000877"
     CDS             complement(2266..2898)
                     /locus_tag="AC1PJC_000877"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HIP6619879.1"
                     /translation="MAIELLTPFTKVELEVEKKETNRKQVGILGGNFNPVHNAHLIVA
                     DQVRQQLKLDEVLLMPEFIPPHVDKKETIDEYHRYSMLKMAIAGIDGLGIETIELERR
                     GVSYTYDTMKLLKEKNPDTDYYFIIGADMVDYLPKWHRIDELVQLVQFVGVQRPRYKA
                     GTSYPVIWVDVPLMDISSSMVRSFIKQGRVPNFMVPHEVLDYIEEKRLYQ"
     gene            complement(2911..3222)
                     /gene="yhbY"
                     /locus_tag="AC1PJC_000878"
     CDS             complement(2911..3222)
                     /gene="yhbY"
                     /locus_tag="AC1PJC_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000060164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HIP6619880.1"
                     /translation="MMLTSKQRAFLNSQAHSLKPIIQIGKNGLNDQIKTSVRQALDAR
                     ELIKVTLLQNTDENIHEVAEILEEEIGVDTVQKIGRILILFKQSSKKENRKISKQVKE
                     I"
     gene            complement(3543..4649)
                     /gene="yqeH"
                     /locus_tag="AC1PJC_000879"
     CDS             complement(3543..4649)
                     /gene="yqeH"
                     /locus_tag="AC1PJC_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000391231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YqeH"
                     /protein_id="HIP6619881.1"
                     /translation="MEELFCIGCGAQIQTLDKAVAGFTPQSALEKGLETGQLYCQRCF
                     RLRHYNEISDVNISDDDFLKLLHSVGESDALVVNVIDIFDFNGSVIPGLPRFISGNDV
                     LLVGNKQDILPKSVKTGKVTQWLTERAHEIGMRPVDVVLTSAQNKQAIKDLIEKIEQH
                     RKGRDVYVVGVTNVGKSTLINAIIQEITGDKDVITTSRFPGTTLDKIEIPLDDGSYIY
                     DTPGIIHRHQMAHYLTAKNLKYISPRKEIKPKTYQLNPEQTLFLAGLGRFDFVAGERQ
                     GFTAFFDNELQLHRTKLQGASEFYQKHAGSLLVPPTSKELKEFPELVRHEFTINEKTD
                     VVFSGLGWIRVNEKAKIAAWAPKGVDVVIRKAII"
     gene            complement(4650..5177)
                     /locus_tag="AC1PJC_000880"
     CDS             complement(4650..5177)
                     /locus_tag="AC1PJC_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008962 - phosphatidylglycerophosphatase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YqeG family HAD IIIA-type phosphatase"
                     /protein_id="HIP6619882.1"
                     /translation="MSLENYMPDFALEKAYDVTVESLKKHGIKVVFVDLDNTLIAWNN
                     PDGTPEMRQWLHDLQDAGIPVVVVSNNKYERVKRAVEKFGIEFEAFALKPFTFGINRA
                     LKRFDVQPYEVIMIGDQLMTDIRAAKRAGLKSVLVKPLIKTDSINTQINRWRERRTMK
                     KIIAKYGAIDYKREM"
     gene            complement(5301..5984)
                     /locus_tag="AC1PJC_000881"
     CDS             complement(5301..5984)
                     /locus_tag="AC1PJC_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEC10/PgrA surface exclusion domain-containing
                     protein"
                     /protein_id="HIP6619883.1"
                     /translation="MGMVRNHEISDKILLPDGYYEKLLEYAQAEKTGFDVELERLGEQ
                     GLLLNIYKGQEADREIILSDIENLDKEIREELAQYAVTLLNPLRKQLGTVAVEMSDFA
                     LDYAVRLAQSLNSTLRYHNYDSLIAIAKTKGVEPKGKDCQSFSEYRQRYSLYDAKKLI
                     YRALAWRLFDDSHADYGHALTILGLDEDESGVEQIGFAFSKFTLDIDWLLTHMIFIPK
                     DWILEEGQI"
     gene            complement(6221..6850)
                     /locus_tag="AC1PJC_000882"
     CDS             complement(6221..6850)
                     /locus_tag="AC1PJC_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis protein CutC"
                     /protein_id="HIP6619884.1"
                     /translation="MIKEFCSENHVGVMKALSLGAKRIELCDNLAVGGTTPSYGVVKH
                     VCQLAHENEATVMTMIRPRGGDFCYDEAEVEMMVEDCKAAIELGSDGLVYGLLTEANW
                     LDEPALERLFAVSQDCQIVFHMAFDQIPRERQFEALDWLVEHGVTRILTRGSLTGSAL
                     NNVEWLQEIVAYAQGKIEILIGGGLTVENVPPLLEKLAIDQVHGTRLFW"
     gene            complement(6899..7807)
                     /locus_tag="AC1PJC_000883"
     CDS             complement(6899..7807)
                     /locus_tag="AC1PJC_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HIP6619885.1"
                     /translation="MAEKRFGTLITLIAGIAWGLSGVSGQYLMSRGVSVDMITSLRLL
                     VSGFFLVGLAYATANEQLLIVLKNRKALLGIFVFAMLGLVLNQMAYLQAIYHTNAGTA
                     TVLQYLCPILVLAYTCLKNREKPSGIELISIILAVAGTFLIATHGKLDELAVTPIGLF
                     WGIFSAFTYALYIILPGKLIRQYGSITVIGLGMLMGGFVVTLGLQTWQHRLPIDGGSF
                     LGLLGIVGVGTIFAYTAFLKGVSMVGPVNGSLLASIEPIASVFFAVWLVNEQFYAIDF
                     VGMLLILLAVLLISLKDILVAQKSIG"
     gene            complement(8154..9635)
                     /gene="galT"
                     /locus_tag="AC1PJC_000884"
     CDS             complement(8154..9635)
                     /gene="galT"
                     /locus_tag="AC1PJC_000884"
                     /EC_number="2.7.7.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0017103 - UTP:galactose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0019388 - galactose catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose--hexose-1-phosphate
                     uridylyltransferase"
                     /protein_id="HIP6619886.1"
                     /translation="MMTGLVDRFVEQVIANSDFEEMDALYLRNRVLALVGDQVLTVQT
                     DLEDLIELKDELLAHGVRTGFVGELLEEQDMVGSCLMDLMTPSPSQVNRDFWQTYQDS
                     PEQAIGDIYELSKRNDYIKMAAIAKNIYYPVSTEYGDLEITINLSKPEKDPKSIAAAT
                     KAEASNYPKCLLCMENEGYQGRINHPARANHRIIRLDLGQEKWGFQYSPYAYYNEHAI
                     FLNQEHVPMVISPRTFEQLLDLLDLLPGYFVGSNSDLPISGGSILTHNHYQGGRHSFA
                     MEKAPIERQLVFDGFESVSAGIVKWPMSVIRLSSADKPSLLGLATKILEKWRSYSDDR
                     VQIKAETDGTPHHTITPIARKRGDLYELDLVLRDNQTSEEFPDGIYHPHPDVQHIKKE
                     NIGLIEVMGLAILPPRLKAELTEVKKYLLGQASQVAAYHQPWAESLKTAHPDVTEETV
                     EQVVRKSVGQIFARVLEDAGVYKRTPEGQAAFLRFVEFVGLAI"
     gene            complement(9645..10817)
                     /locus_tag="AC1PJC_000885"
     CDS             complement(9645..10817)
                     /locus_tag="AC1PJC_000885"
                     /EC_number="2.7.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002275277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004335 - galactokinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046835 - carbohydrate phosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase"
                     /protein_id="HIP6619887.1"
                     /translation="MNKEQLKQAFLDVFDQEADATFFSPGRINLIGEHTDYNGGHVFP
                     AAITLGTYGAARKRDDQLLRFYSANFEELGIIEVDLNNLVFDKADNWTNYAKGVLKFL
                     QEAGHSIDTGMEVFVYGNIPNGSGLSSSASLELLIGIIAEELYGLELTRLDLVKIGKQ
                     TENHFIGVNSGIMDQFAIGMGADQRAIYLDTNTLEYELVPLDLGDHVIVIMNTNKRRE
                     LADSKYNERRAECEKAVEELNAVLNIQTLGELDEWTFDQYSYLIKDENRIKRARHAVL
                     ENQRTLQARKALEEGDLATFGRLVNASHVSLEHDYEVTGLELDTLAHTAWEQEGVLGA
                     RMTGAGFGGCGIAIVHKDKVEAFKENVGKTYTEVVGYEPSFYVAEIAGGSRVLSRK"
     gene            10950..11948
                     /locus_tag="AC1PJC_000886"
     CDS             10950..11948
                     /locus_tag="AC1PJC_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HIP6619888.1"
                     /translation="MVTIKEIAEKAQLSSATISRVLKGDLTLSVSQETRDRIFNLAQD
                     LGYTKHLKKQAPQQKGTIGIVQWYTESEELADLYYYSIRASIEQTASLLGYQIIRSFN
                     DLANPLLQGLDGIIAVGKFSSGQIAELTNLSSKLIFVDSDTLTEGFSCVTTDFEHSVQ
                     TVIDHFHSQGLTDIGLLVGQEETTDGHQLPTDPRLTAFRTYLGSLGILQEDYIYQGKF
                     STQSGYELMSQAIADLGDQLPTAFFMANDTLAVGALRALQERQIAVPERVQLITFNDT
                     AITRQVYPALSSISVFTEEMGQEAMQLLDRVIASPQPHHPRKIKLGTQLVIRESSY"
     gene            complement(12006..13445)
                     /gene="gatB"
                     /locus_tag="AC1PJC_000887"
     CDS             complement(12006..13445)
                     /gene="gatB"
                     /locus_tag="AC1PJC_000887"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017770317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HIP6619889.1"
                     /translation="MNFETIIGLEVHVELNTNSKIFSPSSAHFGEDPNANTNVIDWSF
                     PGVLPVLNKGVVDAGIKAALALNMDIHKDMHFDRKNYFYPDNPKAYQISQFDEPIGYN
                     GWIEIELEDGLTKKIRIERAHLEEDAGKNTHGTDGYSYVDLNRQGVPLIEIVSEADMR
                     SPEEAYAYLTALKEIIQYTGISDVKMEEGSMRVDANISLRPYGQEKFGTKTELKNLNS
                     FNYVRKGLQHEVERQAKILRSGGQIQQETRRYDESTGETILMRVKEGSADYRYFPEPD
                     LPLYEIDDSWIEEVHAELPVFPKARRAHYVENLGLTAYDAGQLTSTKALSDFFEVAVA
                     AGGDAKQVSNWLQGEVAQFLNAEGKTIEQIALTPENLVEMIALIADGTISSKIAKKVF
                     VHLAKEGGSAKAYVEKAGLVQISDPAVLIPIIHQVFEDNEAAVADFKSGKRNADKAFT
                     GFLMKATKGQANPQVAQQLLAQELAKLLD"
     gene            complement(13445..14911)
                     /gene="gatA"
                     /locus_tag="AC1PJC_000888"
     CDS             complement(13445..14911)
                     /gene="gatA"
                     /locus_tag="AC1PJC_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016466749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HIP6619890.1"
                     /translation="MTFNNKTIDELHDLLVKKEISATELTKATLEDIKSREGAVDAFL
                     TITEDVALAQAAALDEKGIDADNVMAGIPLAVKDNISTKGILTTAASKMLYNYEPIFD
                     ATSVSQAYAKDMIIVGKTNMDEFAMGGSNENSAFKPTKNAWDQTKVPGGSSGGSAAAV
                     AAGQVRLSLGSDTGGSIRQPAAFNGIVGMKPTYGTVSRFGLIAFGSSLDQIGPFSQTV
                     KENAQLLNVISGHDVKDATSTINEIADFTSKIGQDIKGMKIALPKEYMGEGIDPQVKE
                     TILKAAKHLESLGAIIEEVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRAEDA
                     TNLDEIYVKTRSQGFGEEVKRRIMLGTFSLSSGYYDAYFKKAGQVRTLIIQDFEKVFA
                     DYDLILGPTAPTVAFGLDTLNHDPVAMYLADLLTIPVNLAGLPGLSIPAGFVEGLPVG
                     LQLIGPKYSEETIYQVAAAFEATTDYHKQQPVIFGGAN"
     gene            complement(14911..15213)
                     /gene="gatC"
                     /locus_tag="AC1PJC_000889"
     CDS             complement(14911..15213)
                     /gene="gatC"
                     /locus_tag="AC1PJC_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006147946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA];
                     GO_process: GO:0006450 - regulation of translational
                     fidelity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HIP6619891.1"
                     /translation="MKISEAEVRHVAKLSKLEFSDQETAEFATSLSKIVDMVELLNEV
                     DTTGVAVTTTMADRKNVLRADIAQKGESREELFKNVPESQDNFIKVPAILDGGGDA"
     gene            complement(15432..16106)
                     /locus_tag="AC1PJC_000890"
     CDS             complement(15432..16106)
                     /locus_tag="AC1PJC_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HIP6619892.1"
                     /translation="MSEQFIPSVLSDLRQDIVQMPEVIKECSGIRIYGRRIRSVLFTT
                     DVSIIANHNADAILAVYPFTPSPAIIKSIMLVASVPVLAGVGGGLTTGMRSANMSLLS
                     ESEGAYAVVVNGPTDVKTIEAINKVVDIPIIYTVVSEKSDLTSRIKAGVDILNVSCGM
                     ETPRVVKKIREAFPDFPIIATGGPTEDSIRRVIEAGANAVSYTAPSNGELFKGKMEKY
                     RKHAKD"
     gene            complement(16289..16636)
                     /gene="rplS"
                     /locus_tag="AC1PJC_000891"
     CDS             complement(16289..16636)
                     /gene="rplS"
                     /locus_tag="AC1PJC_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005590628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HIP6619893.1"
                     /translation="MNPLIQSLTEGQLRTDIPSFRPGDTVRVHAKVVEGNRERIQIFE
                     GVVISRKGQGISEMYTVRKISGGVGVERTFPIHTPRVDKIEVVRYGKVRRAKLYYLRA
                     LQGKAARIKEIRR"
     gene            complement(16902..17453)
                     /locus_tag="AC1PJC_000892"
     CDS             complement(16902..17453)
                     /locus_tag="AC1PJC_000892"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002268947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase family protein"
                     /protein_id="HIP6619894.1"
                     /translation="MTKALISIDYTIDFVADEGKLTAGKSAQAISERIAQVTQEAFEN
                     GDYIFFAIDGHEEGDEFHPEAQLFPSHNIIGTQGRDLYGPLADFYQKHKGHARVRLMD
                     KRHYSAFSGTDLDVRLRERGVDTVVLTGVLSDICVLHTAIDAYNKGYRIEVVSSAIAA
                     LTEENHQFALNHLRHVLGATIID"
     gene            complement(17455..18243)
                     /gene="codY"
                     /locus_tag="AC1PJC_000893"
     CDS             complement(17455..18243)
                     /gene="codY"
                     /locus_tag="AC1PJC_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016399190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-sensing pleiotropic transcriptional
                     regulator CodY"
                     /protein_id="HIP6619895.1"
                     /translation="MTTLLEKTRNITSILKRSEEQLAEELPYNAIAEHLSAIIDCNSC
                     IINSEGEVLGYHMNYETNNDRVEEFFQNKQFPEGYVKAVAQVYDTQVNLPVESELTAI
                     PVESRSTYPNGLTTIAPIHVTGIRFGSLIIWRNDEQFHDDDLILVEIAATVVGIQLLN
                     FQREEDEKNIRRRAAVNMAVNTLSYSEMKAVAAILGELDGNEGQLTASVIADRIGITR
                     SVIVNALRKLESAGIIESRSLGMKGTYLKVLIPAIFDEIKKRDY"
     gene            complement(18395..19609)
                     /locus_tag="AC1PJC_000894"
     CDS             complement(18395..19609)
                     /locus_tag="AC1PJC_000894"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011836593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HIP6619896.1"
                     /translation="MKQFNKSTKLDDVAYDIRGPVLEEAMRMRANGEQILRLNTGNPA
                     EFGFTAPDEVIRDLIHNARKSEGYSNSKGIFSARKAIMQYCQLKKFPNVDIEDIYLGN
                     GVSELIVMSMQGLLDNGDEVLVPMPDYPLWTAAVSLAGGKAVHYVCDEAAEWYPDLAD
                     MESKVTSRTKAIVLINPNNPTGALYPKEILEGIIDIARRHELIIFSDEIYDRMVFDGA
                     VHIPIATLAPDLFVVTMNGLSKSHRICGFRVGWMVLSGPKKHVKGYIEGLNMLSNMRL
                     CSNVLAQQVVQTSLGGYQSVDELLMPGGRLYEQREFITKAINDIPGLSAVKPKAGLYV
                     FPKIDREMYRVEDDEQFVLDFLKQEKVLLVHGRGFNWKDPDHFRIVYLPRVDELAEIQ
                     EKMSRFLRQYRR"
     gene            19764..20216
                     /locus_tag="AC1PJC_000895"
     CDS             19764..20216
                     /locus_tag="AC1PJC_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015445117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0050896 - response to stimulus [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HIP6619897.1"
                     /translation="MTQSYKTILVAVDGSKGAELALHKAIHVALRNQARLIIAHVIDT
                     RALHNVVAFDASVYESLEREAELLLEEYKQEALNAGLTDVQIRIEFGNPKTLLAIDIP
                     KETGADLMLLGATGLNAFERLLIGSSSEYIMRHATIDLLIVRDGEKSL"
     gene            complement(20232..21597)
                     /locus_tag="AC1PJC_000896"
                     /pseudo
     CDS             complement(20232..21597)
                     /locus_tag="AC1PJC_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002891795.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
     gene            21667..22626
                     /locus_tag="AC1PJC_000897"
     CDS             21667..22626
                     /locus_tag="AC1PJC_000897"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004067 - asparaginase activity [Evidence
                     IEA];
                     GO_process: GO:0006528 - asparagine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HIP6619898.1"
                     /translation="MKKILVLHTGGTISMQANHQGEVASSKINPMTQIDSPLEEIQVT
                     SLDFLNVPSPHIRLEHMMALYQKIKEEQMNFDGFVITHGTDTLEETAYFLDTMAIPEK
                     PIVLTGAMRSSNELGSDGIYNYRTALRVAADDKSADKGVLVVMNDEIHAAKYVTKTHT
                     TNVSTFQTPTHGPLGLVTKREILYFKTAEPRVRFDLSRVTGTVPIIKAYADMDSILLD
                     SLTASSISGLVIEALGAGNLPPTILPAIKKLLDQKIPIILVSRCFNGIAEPVYAYQGG
                     GIQLEQDGILFVKELNAQKARLKLLIALNAGLEEQSLADYIQG"
     gene            complement(22690..24708)
                     /gene="recG"
                     /locus_tag="AC1PJC_000898"
     CDS             complement(22690..24708)
                     /gene="recG"
                     /locus_tag="AC1PJC_000898"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HIP6619899.1"
                     /translation="MKRLCDELSVLPGIGPKSAEKFLKINIQNINDLLTYYPFRYEDF
                     ESKSIYDLQDGEKAVVVGEVVSPANVQYYGYKRNRLRFSMKQGEVVLAVSFFNQPYLA
                     DKIVLGQDIAVWGKWDKAKASLTGMKILAQVSDELQPVYHVAQGISQVNLVKTIKTAI
                     DQGYLHLLEENLPSVLRERYRLMNRREAVFAMHFPTNLEEYRQALRRMKFEELFYFQL
                     QLQMLKANNRDISNGLKIAYDADRLAMQIRQLPFVLTDAQSGALAEILSDMKSYGHMN
                     RLLQGDVGSGKTVVAGLAMFAAVTAGMQAAIMVPTEILAEQHFESLRQLFPELSIALL
                     TGGMKAAERRTALEAISSGQVDIIVGTHALIQESVTYHKLGLVVTDEQHRFGVKQRRL
                     FREKGDNPDVLMMTATPIPRTLAITAFGDMDVSIINQLPAGRKPIITRWVKHQQLPTV
                     LDWLERELEVGAQVYFISPLIEESEALDLKNAVDLQSDLQAHFGEQVTVDLLHGKMKN
                     DEKDAIMQAFKERKTNILVSTTVIEVGVNVPNATVMVIMDADRFGLSQLHQLRGRVGR
                     GHKQSYAVLVANPKTESGKERMKIMTETTDGFILAEADLKMRGSGEIFGTRQSGLPEF
                     QVANIIEDYPILEEARRVASQIVSVENWQEDPNWSILLANLKDGEELD"
     gene            complement(24825..24896)
                     /locus_tag="AC1PJC_000899"
     tRNA            complement(24825..24896)
                     /locus_tag="AC1PJC_000899"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(24861..24863),aa:Glu,seq:ttc)
     gene            complement(24919..24991)
                     /locus_tag="AC1PJC_000900"
     tRNA            complement(24919..24991)
                     /locus_tag="AC1PJC_000900"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(24956..24958),aa:Asn,seq:gtt)
     gene            complement(24996..25111)
                     /gene="rrf"
                     /locus_tag="AC1PJC_000901"
     rRNA            complement(24996..25111)
                     /gene="rrf"
                     /locus_tag="AC1PJC_000901"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:15.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
BASE COUNT         7447 a         6274 c         4525 g         6976 t
ORIGIN      
        1 cgacgcacga gaggaatttg tttttcttgt aatttcttta tgtacttctt tactcagaag
       61 aaacatattt ttataagtgt cgattttctg tctcgataag tgattttcct catcaatctc
      121 agcccactct ataacgtgat gcacctcaaa ttcatcagaa ggaaaatcct tctcatttac
      181 tgcgatatta tttttgaaaa attctcttcg tgaccgctta cttttagatg ctgccatatt
      241 ttcctttcat aaaaagcagc caatcgactg cttcattaac tcacactgtg ttcaaaaagt
      301 cagagttttg agttgttgac gaaccctttt tgtcagtcga gttctctccg ctctcactac
      361 tcctcttcta aaagttctgc gacttccaag aagctgcctt cgtgccataa tttttcaagg
      421 ttgtagaggt cacgcatttc ttctgagaag atatgaacga ctacgcctcc aaggtccaaa
      481 aggacccagc caccgttact atcgccttct acacggctac ccttgttccc aacttccgct
      541 accttttcac ggatgttttc cgcaatagcc tccaactgac gactgttcat ggagctggca
      601 atcacaaagt agtctgtcag actagtcacg ccttgaacat caattacaac aaggtcctca
      661 gctcgcttgt catcagcagc ctggaccaca acttttacta aatctagttc tttcatctta
      721 tcctctaatt atattttcta atgtatccac ctgggcaaaa ttccatgacc agatgttttg
      781 gtagtggtca atcaagtctt tggcatccaa tttgcctgaa taacctgtcg tcgttccgtc
      841 ctgaatcaca gctaccttgt agcctagttc aaaggctact ttaatcgtcg tatcaatgca
      901 aaaattggtc gccatgccca tgatgatgag ctgctcaatt cccttttcct gcaaataggc
      961 atgaagccct gtttccttga aggcgctatt gaaggtctta tcgaaaatct tctcactagc
     1021 taagggtgca acagttgaat gaatctccca gtcagcagtc cccttgacca attcctcatc
     1081 atgatggcgg acatggatga cctctagccc cgctttacgg gcttgagcaa ggctatcttg
     1141 ccaaagccga agccgatttt caatcccata gggcttgcct tccacaggca aatgctgaat
     1201 gtcaatgact aacaatgcag atttcaaaac ttgaccccag gcgtttccaa acggaacacc
     1261 aattcccttt cttcttcaag atctaagaca aaaccatttt tctccaagag tcttgccatc
     1321 ttttggttgc ccttgacata ggagacaatc aaatgattgc agacagggtg cttctgagcc
     1381 agttgaataa cagcttccaa agctgcctgt ccatagccct tcccctgaaa ttcttgacca
     1441 atcataaacc gccagagcat atactgctgg atgtcctcat caatgtcaat caaggcaaag
     1501 ccaacaacct gctcatctgc ccagatagca tagggaaaga catcaccatt cattctgtat
     1561 agccaggcat ccgccaagga acgcacgttg ggagctacga agcccttatc tgcctcggct
     1621 actgtcaagt ccaagacagc ttgataggaa atctcatcca caggttttaa tacaatcatt
     1681 cttgctcctt caaccaagaa acatagccat tataggtttc caaggtttgt ggataaatgg
     1741 gaatcccctt cttggctaag taagaaatgg tttgggcagt ttcataggct actgccttgt
     1801 ccaaagactc ttttgcaatt cgtcgcgcct cgtccacccc aggaaaatcc cgattgggtt
     1861 cgatgtagtc cgccacatag agcaccttgt ccagcaaggt catctgccca gcaccaatgg
     1921 tgtgtcgttg aatggcttgg aaaatttcct catctttcaa gccaaaatct tctgcaattt
     1981 tataggcccc aaccacaccg tgccagatgt tattatccca gttaagcaga tccctgtcca
     2041 aatcatactt ggcaatcaag tccagaaaga cttggtcttc cacttccttg gcataatcat
     2101 gcaaaagtgc tgccagactg gcttttttcg gatcacagcc gtattggtct gccaaggcaa
     2161 gcgccgcctg ctccacaccc aagacatggt ggaagcgcgc tggcttcatg gctacacgga
     2221 ttttttccaa aagagcctga cggtcaaagg tcaaatctgc tgcaatcatt ggtaaagtct
     2281 cttttcttcg atatagtcca gaacttcatg aggcaccata aaattcggca cccgtccttg
     2341 cttgataaaa ctacgcacca tgctggagga aatgtccatc aagggtacat ctacccagat
     2401 aaccggatag gacgtccctg ccttgtaacg aggacgctgg acaccaacaa actgcaccaa
     2461 ctggaccaat tcatcaatcc tgtgccattt tggtaggtag tctaccatat ctgcaccgat
     2521 gatgaaataa taatccgtat caggattttt ttccttcagc aatttcatgg tgtcgtaggt
     2581 atagctgaca ccacggcgtt ccagttcaat ggtttcaatc cccaagccgt caatacctgc
     2641 aatagccatc ttgagcatgg aatagcgatg gtattcgtca atggtttctt ttttatccac
     2701 atgaggggga atgaattctg gcatgagcaa gacttcatcc agcttcaact gttgacggac
     2761 ctggtctgcc acaatcaaat gagcattgtg gacagggttg aaattccctc ccagaatccc
     2821 cacttgtttg cgattggttt ctttcttttc aacctctaat tcaaccttgg taaagggtgt
     2881 taagagttca atagccatag gctctccttc ttagatttct ttgacctgtt tggaaatttt
     2941 acggttctct ttcttgctag attgtttgaa taaaatcaag atacgaccga ttttttggac
     3001 tgtatccaca ccgatttctt cttccaagat ttcagctact tcgtgaatgt tttcatccgt
     3061 attttgtagc aaggtcacct tgatcaattc acgcgcatcc agcgcctgac gaacactggt
     3121 tttaatctgg tcattgagac catttttccc aatctgaatg atgggtttga gactgtgtgc
     3181 ctgactgttc aaaaaggcac gttgttttga agttagcata atttattata cacaaagggc
     3241 gttgtaacag actgggagac tgttacaatc gggaaataaa gaaaacaaag tttttcctta
     3301 ttgcgccgct atacttagcc cgtgttcaaa tcagaagact tgaacttcct ttctctttaa
     3361 tcgtaaaaac tgaaatcaaa taccgcttat actcaatgaa aattaaaatc agactaggcg
     3421 acgcagatgc agatagaacc ctactacttt cacgctttca ggtagcaggc tgtaaagctc
     3481 cactggagct ttacactcat caaatcaagt caacaacgtc tgcttttaat tttcgaagag
     3541 tattagataa tcgccttgcg aatgaccaca tccacacctt taggtgccca ggcagcaatc
     3601 ttggcttttt cattgacacg aatccaacca agtcctgaga agaccacatc cgtcttctcg
     3661 ttgatggtaa attcatggcg gaccagttca ggaaattctt tcaattcctt gctggttggt
     3721 ggcactaaaa gtgagcccgc atgtttctgg taaaattcac tagctccctg caacttggta
     3781 cggtggagtt gcaattcatt gtcaaagaag gccgtaaagc cttggcgttc accagctaca
     3841 aaatcaaatc gtcccagacc agccaagaac aaggtttgtt ctggattaag ctggtaggtc
     3901 tttggcttga tttccttgcg agggctgatg tacttgaggt ttttagccgt caaataatgg
     3961 gccatctggt gacggtggat aattcctggc gtatcataga tgtatgaacc atcgtccaga
     4021 ggaatttcaa tcttgtccag cgtcgttcca gggaaacgtg aagtcgtaat gacatccttg
     4081 tcccctgtga tttcttggat aatagcattg atcaaggttg acttgccgac gttggtcacg
     4141 ccgaccacat agacatcccg tcccttgcgg tgttgttcaa tcttttcaat caagtccttg
     4201 atagcctgct tgttttgggc cgaagtcaaa accacatcaa ctggtcgcat gccgatttca
     4261 tgtgcccgct cggtcaacca ctgagtaacc ttgcctgtct tgacagactt gggtaaaatg
     4321 tcctgcttgt tgccgaccaa aagcacgtca tttccagaaa taaagcgagg caagccagga
     4381 atgactgacc cattgaaatc aaaaatatca atgacattga ccaccaaggc atcgctttct
     4441 cctacgctat ggaggagttt caagaaatcg tcatccgaga tattaacatc tgaaatctca
     4501 ttataatggc gcaaacggaa acagcgttgg cagtagagtt gccctgtttc caggcctttt
     4561 tctagggctg attgaggtgt aaaaccagcg acagccttgt ctagcgtctg aatctgggca
     4621 ccacagccga tacaaaataa ttcttccact tacatctccc tcttgtagtc tatcgctcca
     4681 tatttagcga tgattttttt catagtccgt cgctcacgcc aacggttaat ctgcgtattg
     4741 atagagtccg tctttatcaa gggtttgacc aagacagact tgagaccagc tcgcttagca
     4801 gcccgaatat ccgtcatcag ctgatcgcca atcataatta cctcatacgg ctggacatca
     4861 aagcgtttca aagcacggtt aatcccaaag gtgaaaggct tgagagcgaa ggcttcaaat
     4921 tcaatcccaa atttttcaac cgcccgtttg acacgttcgt atttattgtt agacaccacc
     4981 acaacaggaa tacctgcgtc ctgcaaatca tgtaaccact ggcgcatctc tggcgtacca
     5041 tcgggattat tccaagcaat caaggtatta tccaagtcaa caaacactac ttttatgcca
     5101 tgttttttca agctttcgac ggtcacgtca taagcctttt ctaaggcaaa atccggcatg
     5161 taattttcta aactcactgt cgtctccaaa gttttttatc agataattat accatttttc
     5221 taaaaaaaat gcgaatcgat agcagaaaac actcggatca accgagtgcc ttctggaggt
     5281 aatgtaatgg tagttgtgaa ttaaatctga ccttcttcca aaatccaatc tttcggaatg
     5341 aaaatcatat gggttagcaa ccaatcaata tcaagagtaa attttgaaaa agcaaaaccg
     5401 atttgctcca ctcctgactc atcctcatcc aaccccaaaa tggtaagagc atgtccataa
     5461 tctgcatgac tatcatcgaa tagacgccac gcgagagcgc gataaattaa cttcttagca
     5521 tcatagagac tgtaacgctg tctgtactct gaaaatgatt gacaatcctt acctttcggt
     5581 tcaactcctt tggttttagc aatggcaatc aagctatcat aattatgata acgcaaagta
     5641 ctattcaagg attgggctaa acgaacagca tagtccaaag caaaatcact catctccact
     5701 gctacagtcc ccaactgttt acgcaatgga ttcagaagtg ttacggcata ttgagccaac
     5761 tcttctctaa tttctttgtc taaattctca atgtcagaca ggataatctc cctatctgct
     5821 tcctgaccct tgtagatatt aagcaacaga ccctgctcgc caagtctttc caattccaca
     5881 tcgaaaccag ttttctcagc ttgtgcatac tctaaaagct tttcataata gccatctggc
     5941 aatagaatct tatctgaaat ttcgtgattc ctaaccatcc ccatggcatc ctcccccact
     6001 tgtttattta taccattatt gtaacaagtt tatacatttt tgtaaatatt ttcatatcac
     6061 aaactctttg tgcaatatga acaaaaagca cccacttagg tgctttcgta ggaggggtat
     6121 gaaaaagaat aaacagagta tactccctct tccttaaata aagctaatat aaacccagaa
     6181 aagtaaatag tctgctgagc tgtttagaag cagacctgtc ctaccaaaac agtcttgtcc
     6241 catgaacttg gtcaatagct agtttttcta gtaaaggcgg cacattttcc acagtcaatc
     6301 ctccaccaat caagatttca attttacctt gtgcataggc gacaatttcc tgtaaccatt
     6361 ccacattgtt caaggcagat cctgtcagac tcccacgcgt caaaatccgt gtcactccat
     6421 gttctaccag ccaatcaaga gcctcgaatt ggcgttcgcg aggaatttgg tcaaaagcca
     6481 tgtgaaagac aatctgacag tcctgcgaaa cagcaaacag tctttccaag gctggttcgt
     6541 ccaaccaatt tgcctcggtt aacaaaccat aaaccagacc gtctgacccc agttcaatcg
     6601 ctgctttaca atcttcaacc atcatttcaa cctctgcttc atcgtagcaa aaatctccac
     6661 cgcgagggcg aatcatggtc atgactgtgg cttcattctc atgggccagt tgacaaacat
     6721 gtttgaccac tccataactc ggcgtcgtcc ctccgactgc caaattatca cagagctcaa
     6781 tccgtttagc tcctagagat agggccttca tcacacctac atgattttcg gaacaaaatt
     6841 ctttaatcat ctttattcct ttcaagtttt ttctttagta taacaaaaaa agagtatatt
     6901 aaccaatact cttttgggca accaatatat cttttaaaga aataagcaaa acagcaagta
     6961 aaatcaacaa cattccaaca aaatcaattg cataaaattg ttcattgacc aaccatactg
     7021 caaaaaagac agatgcaatc ggctcaatcg aggccaaaag actgccattg acaggaccaa
     7081 ccatactgac gcctttaaga aaggcagtat aggcaaaaat cgtcccgact ccgacaatac
     7141 ctaacaggcc caggaaactt ccaccatcaa taggaagacg atgctgccaa gtttgtaagc
     7201 caagcgtaac cacaaagccg cccattaaca tccctaaacc aatcaccgtt atactgccgt
     7261 attgacggat caatttacct ggcaaaataa tatatagcgc ataagtaaag gctgaaaaga
     7321 ttccccagaa caaaccgatt ggagtcactg ccaattcatc taatttgcca tgagtcgcaa
     7381 tcaaaaaagt tcctgctacg gctaagataa ttgaaatcaa ctcaatccct gatggttttt
     7441 ccctattttt caaacaggta taagccaaga ctaagatagg gcaaaggtat tgtaaaaccg
     7501 tagccgttcc cgcattggta tgatagatgg cttgtaaata agccatctgg ttaagaacca
     7561 gacccaacat cgcaaaaaca aaaattccca acaaggcttt tctatttttc aacactatca
     7621 acagctgttc gttcgctgta gcataagcca ggccaacgag aaagaatccc gataccaaca
     7681 aacgcaggga ggtaatcata tccactgaaa caccacgtga catcaagtac tgtccactca
     7741 ctccagacaa gccccaggct atacctgcta ttaatgtaat cagtgtccca aatctctttt
     7801 ccgccatcat atctccttct cacactgtga atacttccat tataccaaaa agagtaggaa
     7861 tggaggaaaa aggcaggccg ccctccctaa gttcgcgtca acatctcagc gcagtggttg
     7921 attggcagag ttgttcgcgt tttacgctcc aaatatgacc tctacgactg atgcgaacag
     7981 agttcgcttc atccccaacc tcaaactgtc tcccagacag tttgagctgt gcggggggtg
     8041 ggagtgaaac agtctgggga tagactgttt cagctcaaca actggaaata aggacttgtt
     8101 gacgaactct ttaaatcggt cgagttctgt cccactccca ctctttctta catttatatt
     8161 gctaaaccga caaactccac aaagcgtaga aaggctgcct gtccttctgg agtgcgtttg
     8221 tagacccctg catcttccaa tacacgcgca aaaatttgtc ccactgactt acgaacaact
     8281 tgttcgacag tttcttccgt cacatctggg tgagccgttt tcaggctttc cgcccaaggc
     8341 tgatgataag ctgctacctg actagcttga cccagtaagt atttcttgac ttcagtcaat
     8401 tcagctttca aacgtggagg caaaatcgcc aagcccatta cctcaatcaa gccgatattt
     8461 tctttcttga tatgttgcac atctggatgt ggatgataga tgccatctgg aaactcttct
     8521 gaagtctgat tatcgcggag aaccaaatcc agttcgtaca aatcgcctcg tttccgagca
     8581 atcggggtga tggtatgatg aggagttcca tccgtctcag cctttatctg aactctatca
     8641 tctgagtagc tccgccattt ttccaaaatc ttagtcgcta aaccaagaag cgatggctta
     8701 tctgctgaac tcaagcgaat caccgacata ggccacttga caatacctgc cgaaacggac
     8761 tcaaagccgt caaagaccag ctggcgctca atcggtgcct tttccatggc aaaactgtgc
     8821 cgcccaccct gatagtgatt gtgggtcaag atggagccac ccgagattgg tagatcagag
     8881 ttggaaccga caaaatagcc tggcaacaaa tccaacaagt ccaagagctg ctcaaatgtt
     8941 cgcggactaa tgaccatcgg cacatgttcc tgatttagga aaatagcatg ttcattgtag
     9001 taagcatagg gcgaatactg gaagccccac ttttcctgac caagatccaa gcgaataatg
     9061 cggtggttgg cgcgtgcagg atgattaatc cgtccctgat agccctcatt ttccatacag
     9121 agtaggcatt tgggataatt gcttgcttca gctttcgtag cagctgcaat agacttggga
     9181 tccttctcag gtttggacag attgatcgtg atttccaaat ccccatactc tgtcgaaact
     9241 ggataataga tatttttcgc aatcgcagcc atcttgatat agtcattgcg cttgctcaat
     9301 tcatagatgt caccaatcgc ttgctctgga ctgtcctgat aggtctgcca aaaatcacga
     9361 ttgacctgac tcggactcgg tgtcatcaaa tccatcaaac aagacccaac catgtcctgc
     9421 tcttccagca attcacccac aaaaccagtt cgaactccat gagccaatag ttcatctttt
     9481 aattcaatca agtcctctaa atctgtttga acagtcagaa cctggtctcc caccaaagcc
     9541 aagaccctat tgcgcaggta aagagcatcc atttcctcaa aatcactgtt ggcaatgacc
     9601 tgctcaacaa aacgatccac caatcctgtc atcatttctc cgatctattt tcgagataag
     9661 acgcgagagc ctccagcaat ctccgctaca taaaagcttg gttcatagcc aaccacttca
     9721 gtataggtct tgccgacatt ttctttgaag gcttccacct tatccttatg aacaatggca
     9781 ataccacagc caccgaaacc agctcctgtc atccgagctc cgagaacccc ttcttgctcc
     9841 caagctgtgt gagccaaggt atccaattcc aaacctgtca cttcataatc atgttccaag
     9901 gaaacatggg aagcattgac caaacgacca aaggttgcca aatctccttc ttccaaggcc
     9961 ttacgagctt gcagggtccg ttgattttcc aaaacagcat ggcgggcacg cttgatacga
    10021 ttttcatcct taatcaaata actatattga tcaaaggtcc attcatccaa ttctcccaga
    10081 gtttgaatat tcaagactgc attcaattct tccaccgctt tttcacattc cgcacgacgc
    10141 tcattgtact tagaatctgc caattcacgg cgtttgttgg tattcataat gacaatcaca
    10201 tggtcaccca aatccagtgg caccaattca tattctaagg tattggtatc cagataaatg
    10261 gcgcgctggt ctgctcccat accgatagca aactggtcca tgatgccaga attgacaccg
    10321 ataaagtgat tttccgtttg tttcccaatt ttcaccaaat caagacgcgt caattcaaga
    10381 ccgtacaatt cttctgcaat aatcccaatc aagagttcta gagaagctga cgatgacaag
    10441 cctgaaccat ttggaatgtt accgtaaaca aagacttcca tacctgtatc aatgctatgt
    10501 cctgcttctt gcaagaactt aagaacacct ttggcatagt tggtccagtt gtccgcctta
    10561 tcaaagacca gattgttcaa atccacttcg ataattccaa gttcttcaaa gtttgcggaa
    10621 taaaaacgta gaagctggtc atcacgtttg cgagcagcac cgtaggtccc caaggtaata
    10681 gccgcaggaa aaacatgacc accgttatag tcagtatgct caccaatcaa gttaatacgc
    10741 cctggtgaga aaaaagtcgc atccgcctct tgatcaaaca catcgagaaa ggcttgcttg
    10801 agttgttctt tattcataag aacctccttg attttgtaat cgttttcttt tattgtacaa
    10861 ctcaacaatt taaaagtcaa tatttttact aaatttttac taatttcgtt ttttatgcta
    10921 tactagagac aaataaacag gagaaaaaca tggttactat caaagaaatc gccgaaaaag
    10981 ctcaactatc ctctgccacc atttccagag ttctaaaggg cgacctgacc ctatccgtca
    11041 gccaagaaac ccgcgaccgc attttcaact tggcacagga cctgggctac accaaacacc
    11101 tcaaaaaaca agctccccaa caaaaaggca ccatcggtat tgttcagtgg tacaccgaga
    11161 gcgaagagct ggctgacctc tactactact ccatccgtgc cagcatcgag cagaccgcca
    11221 gccttctcgg ctatcaaatc atccgctcct tcaacgactt ggccaatccc ctccttcaag
    11281 gattggacgg catcatcgca gttggtaaat tttcttctgg gcaaatagca gagctgacca
    11341 acttgtcttc caagctgatc tttgtggact ctgatacgct gaccgaggga ttctcctgcg
    11401 tcacgactga ctttgaacac tctgttcaga cagttattga ccacttccat tcgcaaggtt
    11461 tgacagacat tggcctattg gttggacagg aagaaaccac agacggccac caactgccaa
    11521 cagatccccg cctgactgcc tttcggacct atctaggctc cttgggcatt ctccaagaag
    11581 actacatata ccaaggaaaa ttctccaccc agtcgggtta tgagctgatg agtcaggcta
    11641 ttgcagacct aggcgaccag ctacccactg cctttttcat ggctaatgat accctggctg
    11701 tcggcgccct gcgtgcttta caggaacgtc aaatcgcagt gccagaaaga gttcaactca
    11761 tcacctttaa cgatacagcc atcacgcgcc aagtctatcc tgccttgtct tctatcagcg
    11821 tcttcaccga agaaatggga caagaagcca tgcaactact agaccgtgtg attgctagtc
    11881 cgcagcccca ccatccccgt aagattaaac taggtaccca gctagttata cgggagagtt
    11941 cttactaaaa gtgcttaaga aaaaccgaga attcagcacg aactctcggt tttcttctat
    12001 tcaatttaat ccaacaactt agccaattcc tgagccaaaa gttgttgagc aacttgtggg
    12061 ttagcttgcc ccttagtcgc tttcatcaag aaacctgtaa aggccttatc cgcattgcgt
    12121 ttgccagact tgaagtcagc tacagccgct tcattatctt caaagacttg gtggataatc
    12181 ggaatgagga cagctgggtc tgaaatctgt accaaaccag ccttctcaac ataagcctta
    12241 gcagagccac cttctttggc caagtgaaca aagactttct tggcaatctt agatgaaata
    12301 gtgccatccg caatcaaggc aatcatctca accaagtttt ctggtgttag agcgatttgc
    12361 tcaatagtct taccttcagc attgaggaac tgagccactt caccctgcaa ccagttggac
    12421 acttgtttag catcgccacc tgctgccact gctacttcaa agaagtcaga caaggccttg
    12481 gtagacgtca actgaccagc atcataggca gtcaagccca agttctccac atagtgagca
    12541 cggcgagcct ttggaaagac tggcaattct gcatgaactt cctcaatcca gctatcatca
    12601 atctcataga gtggcaggtc tggctcaggg aagtaacggt agtcagctga cccctcctta
    12661 acacgcatga gaatggtttc accagtagat tcatcgtaac gacgagtttc ctgctggatt
    12721 tgaccacctg aacgcaagat tttggcctga cgttcaactt cgtgctgcaa gcccttgcga
    12781 acatagttga aggagttgag gtttttcaac tcagtcttgg taccaaattt ttcttgacca
    12841 tagggacgaa gagagatgtt ggcatccacg cgcatagacc cctcttccat cttgacatct
    12901 gaaataccag tgtactgaat gatttcttta agggctgtca agtaggcata ggcctcttca
    12961 ggcgaacgca tatccgcttc tgatacaatc tcaatcagtg gcactccttg acggttgagg
    13021 tctacataag aatagccgtc tgtcccgtgg gtattcttac cagcatcctc ttccaagtgg
    13081 gcacgctcga tacggatttt cttggttaaa ccatcttcta gctcaatctc aatccagcca
    13141 ttgtagccaa tcggctcgtc aaactgagaa atctgatagg ctttagggtt atcaggatag
    13201 aaatagttct tgcggtcaaa gtgcatgtcc ttgtgaatgt ccatgttcaa agccaatgca
    13261 gccttgatac cagcatccac aacacccttg ttaagaacag gaaggacacc tgggaaagac
    13321 cagtcaatca cgttggtatt ggcatttgga tcctcaccaa aatgagcaga tgaaggtgag
    13381 aaaattttcg agttggtatt caactccaca tggacttcta gaccaataat cgtttcaaag
    13441 ttcattagtt agcacctcca aaaatcactg gttgttgctt gtggtagtct gttgtcgctt
    13501 caaaggcagc agccacttgg taaatggttt cttctgaata ttttggacca atcaattgca
    13561 aaccgactgg caagccttca acaaaaccag caggaataga aagaccagga agacctgcca
    13621 agtttacagg aattgttaac aagtccgcca agtacatggc cacagggtca tggttgagcg
    13681 tgtccaaacc aaaggcaacc gtcggagctg ttggccctaa aatcaagtca tagtccgcaa
    13741 agactttttc aaaatcttgg ataatcaagg tccgtacctg accagccttc ttgaagtagg
    13801 catcgtagta accagatgac aagctaaatg tacctaacat aatacgacgt ttgacttcct
    13861 caccaaaacc ttggctacgg gttttcacgt aaatctcatc caagtttgtc gcatcttctg
    13921 cacggaaacc ataacggatt ccgtcaaaac gctgcaagtt agaagacgcc tctgatgatg
    13981 cgataatgta gtaaacagca accccatact tagaatgtgg caggctaact tcttcaatga
    14041 ttgctcccaa gctttccaaa tgcttagccg ccttgagaat agtttccttg acctgcggat
    14101 caatcccttc gcccatgtat tctttcggca gagcaatctt catacccttg atgtcctgac
    14161 caatcttgct agtaaagtcc gcaatttcat tgatcgttga tgttgcatcc ttgacatcat
    14221 gaccagagat gacattgagc aactgggcat tttccttaac cgtctgtgag aatggaccaa
    14281 tctggtcaag agatgaacca aaggcaatta aaccaaaacg tgacaccgtt ccataggtcg
    14341 gtttcatacc gacgatgcca ttaaaggctg ctggttgacg aatggaacca cctgtgtcag
    14401 aaccgagtga caaacggacc tgaccagcag caactgcagc tgccgaacca cctgaagaac
    14461 caccaggaac ttttgtctgg tcccaagcat ttttagtcgg tttgaaggca gagttctcat
    14521 tagaaccacc catggcaaat tcatccatgt tggtcttacc aacaataatc atatccttgg
    14581 cataggcttg ggaaactgat gtcgcatcga aaatcggctc gtaattgtag agcatttttg
    14641 aagctgccgt ggtcaaaatc cccttagtag agatattgtc cttgactgcc aaaggaatcc
    14701 ccgccataac attgtccgca tcaatccctt tttcatcaag ggctgcagcc tgcgccaagg
    14761 ccacatcttc cgtaatagtc aagaaagcat ccactgctcc ctcacggctc ttaatgtctt
    14821 ccaaagtggc cttggtcaac tccgtagccg aaatctcctt tttgacaagg aggtcatgca
    14881 attcatcaat ggttttattg ttaaaagtca ttaggcatct cctcccccgt ctagaatagc
    14941 tggtaccttg ataaagttat cttgtgattc aggcacattt ttaaagagct cctcacggct
    15001 ctcacctttt tgggcaatat ctgctcgcaa gacattctta cgatcagcca tagtggttgt
    15061 taccgcaaca cctgtcgtat ctacttcatt gagcaattca accatatcga caatcttgct
    15121 caaacttgtc gcaaattccg ctgtttcctg gtccgaaaat tccagcttag acagcttggc
    15181 aacgtgacgg acttcagctt cagaaatctt cattcttact ttcctcctaa tggaaatcta
    15241 tcttctcatt ataccatatt tccagcccca gacaaaggta gaaatgacct aatgtgttac
    15301 caatttcctc ctaaaaatcc gttctttaaa ttgcgaagta ttcctaatct cacaccgtaa
    15361 aacgataaaa aaacagcaag tttcatctag caataaaact tactgtttgc ttagcctatc
    15421 ttttttatga gctaatcctt tgcgtgtttg cggtattttt ccattttccc tttaaaaagc
    15481 tccccattac ttggtgctgt ataggagaca gcattggctc cagcttcgat aacccgacga
    15541 atagagtcct cagtcggacc accagtcgca ataattggaa agtcagggaa agcttctcga
    15601 atcttcttca caacccttgg cgtttccata ccgcaagaaa catttaaaat atctactcca
    15661 gctttaatcc gtgaggttaa atcagacttt tcagaaacaa cggtgtaaat gataggaata
    15721 tctactacct tattgattgc ctcaattgtt tttacatccg ttggtccatt taccacaaca
    15781 gcgtatgctc cctccgactc agacaataga ctcatattag ctgaacgcat acctgtcgtc
    15841 aagcctccac caacaccagc caagactgga actgacgcaa ccaacataat acttttgata
    15901 atagctggac tgggcgtaaa tggataaaca gccaaaatag catctgcatt gtgattggca
    15961 ataatagaca catccgttgt aaataagact gaacgaatgc gacgaccata aatacgaatt
    16021 ccactacatt ccttgataac ttctggcatc tgaacaatat cctgccgtaa atctgataaa
    16081 acagatggaa taaactgttc gctcatccgc aacctcctct atactagcta caataatata
    16141 tagtataaca tattatttga tggaagatac acaaaaataa tccattttac cactgctttc
    16201 acaatttggt actttttcaa cagatttaaa aaaagagaca gctttcgctg cctcccattc
    16261 tccgaccaaa atagtctgta ggactatctt aacgacggat ttctttgata cgtgctgctt
    16321 taccttgcaa tgcacgtagg tagtacaatt tagcacgacg tactttaccg taacgtacta
    16381 cttcaatctt atcaacacgt ggagtgtgga ttgggaatgt acgttcaaca cctacaccac
    16441 cagagatttt acgtacagtg tacatttctg agatgccttg acctttacga gagataacaa
    16501 caccctcgaa aatctggata cgttcgcggt taccttcgac aaccttagcg tgaacacgca
    16561 cagtgtcacc aggacggaat gaagggatgt cagtacgaag ttgaccttct gtcaaacttt
    16621 ggatcaatgg attcatttta ttctcctatc tttgtcaatc ttaggtgctt ttaaacccag
    16681 cggataaact gtatttttgt gcgtccatta cacacagact atattataca ccaagtaatc
    16741 acctatgtaa agcattttga taaatttatc atggtcaatc acaccgcttc ttttacaagt
    16801 taagtcaaca aggtctgagt ttgattttcg aagagtgtta atgatacaga ttcctgttgg
    16861 agaaaaacga aaaaccagtc cacagactgg tcactatact attagtcaat aattgtcgca
    16921 ccgagtacat gacgcaaatg gttgagagca aactgatgat tctcctccgt caatgcagca
    16981 atggctgatg agaccacctc aatacgatac cccttattat aagcatcaat agctgtatga
    17041 agaacacaaa tatcagacaa aacacccgtc aagacaaccg tatctactcc acgttctctt
    17101 agtcgaacat ccaaatccgt cccagaaaaa gcagaataat gacgtttatc catcaaacga
    17161 acacgcgcat gccctttatg tttttgataa aaatctgcta aaggaccata caagtcacgc
    17221 ccttgcgtcc caatgatatt atgacttggg aaaagctgag cttcaggatg aaattcatcc
    17281 ccctcctcat gaccatcaat cgcaaagaaa atgtagtctc cattttcaaa agcttcttgc
    17341 gtaacctgag caattcgttc agaaatagcc tgagctgatt ttccagcagt cagctttcct
    17401 tcatctgcca caaaatctat tgtataatca atcgaaatca atgcttttgt cattttagta
    17461 gtcacgtttc ttaatttcat caaaaatagc tgggatgaga actttcaaat aagtcccctt
    17521 cattcccaaa gaacgacttt caataatccc tgcactctcc aacttacgca gtgcattcac
    17581 aatcaccgag cgtgtaatac cgatacgatc tgcaatcaca gaagcagtca attgcccctc
    17641 attgccatcc aattcaccca aaatagctgc aactgccttc atttctgagt aagatagcgt
    17701 atttaccgcc atattaactg ccgcacgacg acggatattc ttctcgtctt cttcccgttg
    17761 gaaattaagt aactgaatac caactactgt tgccgcaatc tcaaccaaaa tcaaatcatc
    17821 atcgtgaaac tgctcatcat tccgccaaat aataagcgaa ccaaaacgaa tccccgttac
    17881 gtggataggc gctatcgttg tcagcccatt tggataagtc gatcgtgatt cgacagggat
    17941 ggcagtcaac tcgctctcga caggcaaatt aacctgcgta tcgtaaacct gcgcaactgc
    18001 ttttacatat ccttctggga attgtttgtt ttggaaaaat tcttccacac gatcattgtt
    18061 cgtctcatag ttcatgtggt atcccaaaac ttcaccttca ctattaatga tgcacgaatt
    18121 gcagtcaata atagctgata aatgctcagc aatggcattg taaggcaatt cttctgccaa
    18181 ttgctcttcg gaacgcttca aaatagaagt aatattccgt gtcttctcta ataatgttgt
    18241 catattttcc tctttactct gtaattgctt tcagtatagc aaaaaataca taaaatttca
    18301 acaattatca gaatatttac cgttgttaga aaaatacaaa caatttcatt caagtaaaaa
    18361 gaaaaggctg attaacattc agcccaaaat tccattacct acgatattgc cgcaagaatc
    18421 gtgacatttt ttcttgaatt tctgccaact catccacacg tggtaaatac acaatacgga
    18481 aatgatctgg atccttccag ttaaaacctc gaccatggac caaaagtact ttttcttgct
    18541 tgaggaaatc caatacaaat tgttcatcat cctcaactct gtacatctca cgatcaattt
    18601 tggggaagac atacagacca gccttaggtt ttacagcaga aagtcccgga atatcattga
    18661 tcgccttggt aatgaactcc ctttgttcat ataagcgtcc gccaggcatc aagagttcat
    18721 caaccgattg gtaacctccc aaagaagttt gaacaacctg ttgagccaaa acgtttgaac
    18781 acaaacgcat attggacaac atattcaagc cttcaatgta cccttttaca tgctttttcg
    18841 gaccagataa gaccatccaa cctactcgga aaccacaaat acgatgcgat ttagacagtc
    18901 cattcatcgt cacaacaaat aaatctggag ccagtgtcgc aatagggata tgaacagctc
    18961 cgtcaaagac catacgatca taaatctcat cagagaaaat gatcaattca tgtctacgag
    19021 caatatcaat gattccttct aaaatttctt tcggatagag agcaccagtt ggattattgg
    19081 gattaataag gacaattgcc ttggttcgag aagtcacctt ggactccata tctgccaaat
    19141 ctggatacca ttcagctgct tcatcacaaa catagtgaac agctttacca ccagccaaac
    19201 taactgcggc agtccagaga ggatagtctg gcattggcac caacacctca tcaccattat
    19261 ctagcaaacc ttgcatagac ataacaatca gctcactcac gccgtttcca agataaatat
    19321 cttcaatatc aacatttgga aatttcttta gctgacaata ctgcatgata gccttacgtg
    19381 cagaaaaaat tcccttactg ttcgaatatc cctctgattt acgggcgtta tgaatcaagt
    19441 cacgaataac ttcatctgga gcagtaaaac caaattctgc aggattcccc gtattcaaac
    19501 gtaaaatctg ctctccattg gcacgcatgc gcatggcctc ttccaaaaca ggcccacgaa
    19561 tatcatatgc tacatcatcc aattttgttg acttgttaaa ttgcttcatg tcgtcacctc
    19621 gactttctat cttttctatt gtactgtaaa agctaaaaaa gtacaagaat cctttacatt
    19681 ttctctcaaa aggcttataa taaaaatgta aggaactact ctacctattt cgggacaaag
    19741 ctcttctgaa aggagtgatt attatgacac aatcttacaa aacaatactc gtcgctgtag
    19801 acggctctaa aggagcagaa ttagctcttc ataaagccat tcatgtcgca ctacgcaacc
    19861 aagcacgtct gattatcgcc catgtgattg acacccgtgc tctccacaat gttgttgcat
    19921 ttgacgcctc tgtctatgaa tctttagaaa gagaggcgga gctcctcctc gaagaataca
    19981 aacaagaagc tctcaacgcc ggtctgaccg atgtacagat tcgcattgaa ttcggtaacc
    20041 ctaaaaccct actggctatc gatattccaa aagaaaccgg tgctgatctt atgttacttg
    20101 gagcaactgg tctaaacgcc tttgaacgtc tcctgatcgg atcctcatcc gaatatatca
    20161 tgcgccacgc aactatcgat ttactcattg ttcgcgatgg agaaaaaagt ttataaacca
    20221 aaagacttga tttacgaatc aagtcttttc atctgtcttt tcagctcttc ctgaatcttt
    20281 tcctccggcg caaaccgttc ttcccaatca tcaggtttta aaattttatg ggtaattgga
    20341 tcaaaatggg ccttcccatc tggaaaagtt ttccccatat ttgcagtatg gactatctga
    20401 aaaattggtt ctggatcaac ccccatcaaa acaaacgaac catatgtaaa ataaagaata
    20461 tccagcaaag catctacctg atcctgcatc gaaaccccga aacctctctt gccagatacc
    20521 ttagcagcag cagtatctaa atcccgatga agttgctgaa taaaatcatg aaactcaact
    20581 tcagattctg aagctgcatg tagaaattct accaactcct ccaatttaaa accagcgcga
    20641 tgcaaagccg tctgtccatc atacacactg ggaagttctt gggtttcacc atccattaaa
    20701 aaatgaaaat cctttaccct attaaaatta tcgtccttgc tctgaaacat cttatccctc
    20761 aatcacacca aaatgaatta atgccttata aatcccatca cgattatttg tatccgtaac
    20821 aaaggaagct gcttgtttaa cctttttcgt cccatttccc atcgctaccg agtgctgaat
    20881 ttcattcaac atttcaaaat cattattaga atccccgaat accataactt catctaactc
    20941 aaaaccatat cgatctgcaa cctttacaat acccgataat tttgaatttc ccttactgat
    21001 aatatcagtc gcatagggac tcgaacgcgt aaaagacaag ttcggaaaga gcatctccaa
    21061 tgattgtgtc tccctttccg tcgtcagcaa catcagctga tagattggtt gaaagagaaa
    21121 acctttcaaa ttcgtttcct gttgaggact aatccaacgt accaagcgat tgaaaataaa
    21181 atttatgatt ccagcccagg actccggaat catacgcgtc acacgatatg caaaatttcc
    21241 tgttccagca ctcataatct tactaccaaa tatgcctcta gcagttccaa aagataaatc
    21301 cttatggtga gtttgcgcat actccataat ttgtttaatt tgctttggct ctaaactctg
    21361 actataaata acttcttctc ttgaaaaaat atattgacca ttataagcaa tggccaaatc
    21421 tagccctaaa ctagccatat actgcaaaac aaaacgaggg tcacgtcctg tagctagacc
    21481 aactaaaatc cccttctctt tcaaagcatt aatggcgaga atagttgaac tactaaccat
    21541 acgattgtcg gtcaataagg taccatcaat atcgaaaaat acagccttta tcgtcaacca
    21601 actcacctac tttctaagaa ttatgttaca attagtatat cacactttga aagaaactga
    21661 aaatttatga aaaaaattct agtactgcat acaggtggaa ccatttctat gcaagccaat
    21721 catcagggtg aagttgcatc gagtaaaatc aatccaatga cccaaattga tagcccacta
    21781 gaagaaattc aagtgacatc cttggatttt ctcaatgttc caagtccaca cattcgctta
    21841 gaacacatga tggctctata ccaaaaaatc aaagaagaac aaatgaactt cgatggtttt
    21901 gtcattacac atggcacaga cactttagaa gaaactgcct atttccttga tacaatggct
    21961 attccagaaa aaccaattgt attgaccgga gccatgcgtt cctcaaatga actaggtagc
    22021 gacgggattt ataactaccg aacagcccta cgtgtggctg ctgatgataa atccgcagat
    22081 aaaggtgttc tagtggtcat gaacgatgaa attcatgctg ctaaatatgt tacaaaaacg
    22141 cataccacca atgtctcaac ctttcaaaca ccaacccatg gaccactggg cttagtcacc
    22201 aaacgagaga ttctctattt taaaactgct gaaccacgtg ttcgatttga cttgtcaaga
    22261 gtcacaggaa cggtcccaat cataaaagct tatgcagata tggactccat cctccttgat
    22321 tctctcactg caagctcaat ttccggttta gtcattgaag cactcggcgc cggaaatctt
    22381 ccgcctacca tccttccagc cattaagaaa ctccttgatc aaaagatccc cattattctg
    22441 gtatctcgct gttttaacgg aattgctgag cctgtctatg cctaccaagg aggtggcatc
    22501 caactggagc aagacggcat tctatttgtt aaagaattga atgctcaaaa ggcccgactc
    22561 aaactcctta tcgctctcaa tgcaggcttg gaagagcaaa gcttggcaga ttacatccaa
    22621 ggttaatcgt tgacgaacta tacaatatgt caaaagacca gcacatgtgt gttggccttt
    22681 tttatatgac taatccaatt cctctccatc tttcaaatta gcaagtaaaa tcgaccaatt
    22741 agggtcctcc tgccaatttt ccacactaac aatctgacta gcaactcgtc ttgcttcctc
    22801 taaaattgga tagtcctcga taatatttgc aacctgaaat tctggcaaac ctgattgacg
    22861 agttccaaat atttctccag acccacgcat ttttaagtca gcttcagcca aaataaaacc
    22921 atctgtcgtc tctgtcataa ttttcatgcg ttccttacca gactctgttt taggattagc
    22981 aactaacact gcataagact gcttatgacc acgtcctaca cgccctctca actgatgtaa
    23041 ttggcttaaa ccaaaacgat cagcatccat aataaccatc accgttgcat tgggcacatt
    23101 gactccgact tcaataacag tggtagaaac caaaatattc gtttttcgct ccttaaaagc
    23161 ctgcatgatg gcatctttct cgtcattctt catcttaccg tgtaacaaat ccactgtaac
    23221 ttgctctcca aaatgcgcct gtaaatcaga ttgcagatct acagcattct ttaaatctag
    23281 agcctcagat tcttcaatca acggagagat aaaataaacc tgagcaccca cttctaactc
    23341 ccgctccaac caatctaaga ccgtgggtag ctgttgatgt ttgacccagc gagtgataat
    23401 tggctttcga ccagcaggta actgattaat aatcgataca tccatatctc caaaagctgt
    23461 aatggctaac gtccgaggaa taggtgtagc agtcatcata agcacatccg gattatcacc
    23521 cttctcacga aacagacggc gctgtttaac accaaaacga tgttgctcat cagtcacaac
    23581 caaaccaagc ttatggtacg tcacactttc ctggataaga gcgtgagttc ctacaatgat
    23641 gtctacctga ccactagaaa tcgcctctaa agcagtacga cgctccgcag ctttcattcc
    23701 acctgtcaaa agagcaatag aaagttctgg aaaaagctgg cgcaaactct caaagtgttg
    23761 ctcagccaaa atttctgtcg gcaccataat tgcagcctgc atccccgcag tcacagcagc
    23821 aaacatagcc aatccagcaa ctactgtctt ccctgaacca acatcccctt gtaacaaacg
    23881 attcatgtgc ccataggact tcatatctga tagtatttca gccaaagccc cagactgagc
    23941 atctgttaag acaaacggca attgtcttat ttgcatagcc aatctatcag catcataggc
    24001 aatcttcaaa ccattcgaaa tatcacgatt gttggctttc agcatttgca actgtaattg
    24061 aaaataaaat aattcctcaa acttcatacg tcgcaaagct tgtctatact cttctaaatt
    24121 tgttggaaaa tgcattgcaa aaaccgcctc tcggcgattc attaaccgat agcgctctcg
    24181 taaaactgat ggcaagttct cctctaataa atgcaaatat ccctgatcaa tagctgtttt
    24241 aatagtctta accaaattta cttgcgaaat cccttgcgcc acatgataga caggttggag
    24301 ctcatctgat acttgagcca aaattttcat tcctgtcaaa cttgccttag ccttatccca
    24361 ctttccccaa actgcaatat cctgccccaa aacaatctta tctgctaaat aaggctgatt
    24421 aaaaaacgaa actgctaaga caacctcacc ctgtttcatt gaaaaacgga gtctatttct
    24481 tttgtaacca taatactgta cattagctgg agataccacc tccccaacta ccactgcctt
    24541 ctccccatcc tgcaaatcat aaatagactt actctcaaaa tcttcatatc taaatggata
    24601 gtaagtcagc aaatcattaa tattctgaat gttaattttt aagaattttt cagccgattt
    24661 tggaccaatc cctggcaaaa ccgataattc atcacataat cttttcatgt ctctattata
    24721 tcaacaaaca atgaatagac aaagtaacaa gaaaagaaaa agagccaaat taaagcccat
    24781 acacctcaaa aaacaaaaaa agagacctaa gcagcctcca aatatagtcc gtacgggatt
    24841 cgaacccgtg ttaccgccgt gaaaaggcgg tgtcttaacc ccttgaccaa cggaccatat
    24901 actaaagatt tctctttact ccgccaacag ggctcgaacc tgtgacatca tgattaacag
    24961 tcatgcgctc taccaactga gctatggcgg aatatgctaa gcgactaccg tatctaacag
    25021 ggggcaaccc ccaactactt caggcgttct agggcttaac tgctgtgttc ggcatgggaa
    25081 caggtgtatc tcctaggcta tcgtcactta actactgagt cttgtcaact caaaattgaa
    25141 tatctatatt ctaacaagaa accgatcgct tgtcaatatt gactcgtgag taattgtact
    25201 cgggctaaat ccttggaaaa aa
//
LOCUS       DBNFCX010000025        24303 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.025, whole genome shotgun sequence.
ACCESSION   DBNFCX010000025 DBNFCX010000000
VERSION     DBNFCX010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 24303)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24303)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24303
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.025"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..635
                     /gene="plsY"
                     /locus_tag="AC1PJC_000902"
     CDS             <1..635
                     /gene="plsY"
                     /locus_tag="AC1PJC_000902"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HIP6619900.1"
                     /translation="LILLFIAYFLGSIPSGLWIGQTFFNINIREHGSGNTGTTNTFRI
                     LGPKAGTIVFVIDFLKGTLAALLPLIFHAQGISPIVFGLMAVLGHTFPIFAQFKGGKA
                     VATSAGMLLGVAPAFCLYLVVIFVTSLYLTSMVSFSSVLAAALAILGALLFPAIGIIL
                     PSYDWLFTVIIVFLGLFVIIRHKENIQRILKKEENLVPFGLNLTKQKKRV"
     gene            complement(646..4299)
                     /gene="addA"
                     /locus_tag="AC1PJC_000903"
     CDS             complement(646..4299)
                     /gene="addA"
                     /locus_tag="AC1PJC_000903"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0000724 - double-strand break repair via
                     homologous recombination [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-exonuclease AddAB subunit AddA"
                     /protein_id="HIP6619901.1"
                     /translation="MAFEQFLSAEEIKAVQLAEANSDKQQKRTPEQIEAIYTHGQNVL
                     VSASAGSGKTFVMVQRILDKLKRGVGIDQLFISTFTVKAAGELKERIEKNLNETIAET
                     TDMDLRRHLSAQLADLTKADIGTMDSFTQKLVTTYGYSLGISPQFRILQDETEKASLK
                     KEVFDQLFADYIEEDENGEFRNLVRNFSGNRKDNSGFRQVVYQVHDFSQSTSSPTKWL
                     KEQAVQADLYSQERIEQILEHGFKEKVLDKLYQAADFFRYHVEWGRNDFGSAKYFANV
                     EEVLDLLTGLDSLDQKDLMERVERILHINDQSRGKGLTNANRPKDEHLIVFKEEYNAG
                     KSQIISGLRDLGQEVYELTLLKDYQIQALPLLVLLRDFVLDFSQAYLDVKIKEAAFEF
                     GDIGHFAIRILEENADIRQFFQEKYHEVMVDEYQDNNHSQERMLDLLSNGHNRFMVGD
                     IKQSIYRFRQADPMIFQEKFELYQENPQAGKLILLKENFRSQIEVLEATNAIFTRLMD
                     RQVGEIKYDDTHSLVAGSPGQKIAQPKHEMEYLIYDQQDSANSSTDAEEETPLTAGEI
                     EVVAKEIIRLHNEEGADFKDITLLVQKRTHNDLIMSIFEKHGIPIVADGGAASYLQSL
                     EVMIMLDTLRVINNPLNDYALVALLKSPMFRFDEDELTRISLQAGTGFFYQKMEIAHQ
                     TNGQHPELMSGELKKKIKDFLSILENWRAYAKLHSIYDLIWKIFNEKFYYDYVGALPN
                     GSKRQANLYALGLRANQFEKTGYKGLSRFIAMIDRALANDKDLADVQEFLPQNAVQLM
                     TIHKSKGLEFKYVFLMNIDKRFNLEDHYQSVIISRKNGLGIQYLADMKDKVNSPLPQV
                     RVLMNTLPYQNNLQELKIANLSEQMRLLYVALTRAEKKLYLVGKGNADKLAEKYDGKK
                     EDGVLAQSTRESIATFQDWILAIDEAFSGEDLHFKKVFVTDEDLTEEKIGKLKLKNKL
                     EDASLKDIRQSEDIAQALDQLSSVQELNERYKAAIELPSLRTPSQIKKLYEPVLEQEG
                     MEVMEKYQPKRTFNLPDFSKKPKITGAQVGSAVHELMQRLDLSWLVTEDTVREALETV
                     HAEQAVKDKINVQMILDFFDTDLGREILANTDKLHREAPFASLQTDSLSQEQFVLRGI
                     IDGYLLYDDHIVLFDYKTDKYDQPSQLSQRYQAQMQLYAEALKKAYKIDRVDCHLILL
                     GGEKIEVVEVKVN"
     gene            complement(4299..7565)
                     /gene="rexB"
                     /locus_tag="AC1PJC_000904"
     CDS             complement(4299..7565)
                     /gene="rexB"
                     /locus_tag="AC1PJC_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0000724 - double-strand break repair via
                     homologous recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent nuclease subunit B"
                     /protein_id="HIP6619902.1"
                     /translation="MKLVYTDIRNPLTQYLTDTAAEFAKEAKRVFYIAPNSLSFEMER
                     KVLEYLPEQATFDIIVTRFGQLARYLMIDRKEAGQPLDDVGLAMIFFRVLSQFEDGDL
                     KVYGRLQTDFGFINQLVALYKELQRANMSILDLEAMDSPDKQADLVKIFLAVTDILSK
                     EGFEHQSKLAQLTSLVDTGQLDEQLKNIVLVVDGFSRFSAEEEALVSALNERVSEILI
                     GVYASKKAVQATYAEGNVYQANVDFLRQLSAQFQTKATYIGQEPVLDSIGKFSKNMEA
                     YYDYSGTMLDLTPEDQEKIQLWEVVNQKEEVEQVATAIRQHVHQGARYKDILLLLGDV
                     DSYKLQIGKIFDKYDIPYYFGKAEEMSHHPLVHFVESLERLRRYRFRAEDLFNLLKSG
                     LYASISQKELDLFESYILFADMKGQAAFSRAFSVNGRADYDVEVIKEKRLVYDLNVLE
                     PLRAKIMEPLNQLFKAGPQSGTALLEKFMAFLEVIELPQNMEKMSRNLSEVEQEKEEQ
                     VWKSFTHILENFHQIFGKEKLKMDDFLAILQAGMQASHYRTVPATVDVVNVKSYDLIE
                     PHTAKYVYAIGMGQSNFPKVAKNTSLLTEEEMEKVNLVSASSSRFDLVSRENIKKNHV
                     AMMSLLNAATEQLVISTPQIYNEGEDSLSPYIKILQKMGLKSEERGRIKTLSPQDIGH
                     YKSLLSRLIESERPSLETEEWEGQRAFWTVLVRHLKKKLESQGIEIPTITGDIASKQL
                     SDETLAALYPEDKPLNLSASSLTNFYNNQYLYFVRNVLRLREQESIHPTAFQHGLFLH
                     RIFERVVMDQSELDFDQKVDKAILRTRDEAEFAMFYNQDADARYTEEVLDKIARSSAT
                     ILRDNDLVEIDGQEKSFRQDKALVFDLQNGKSVHVNGTIDRLDTLQINQAVGVVDYKS
                     SDQSFSVGDFYNGLKPQLVTYLAALQELDETKDKPVFGAMYLHLQDPIIKLKDTKNLE
                     QLEGAANTSLVYKGLFLKEESLGLNHFYQTRNQLYTEDEFAVLLNHNQELYKQAAKDI
                     LDGRFAINPYTKDGRSVAGEQLKAITGFEADRHMGMARRLVKEVKRQDWMERMKGGQD
                     "
     gene            complement(7731..15137)
                     /locus_tag="AC1PJC_000905"
     CDS             complement(7731..15137)
                     /locus_tag="AC1PJC_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HIP6619903.1"
                     /translation="MRKAKKKSFNWYGMKQHFSIRKYHFGAASVLLGMSLVMGAGAQT
                     VKAEETAASSDATTASSTSATSTEVSTSTEEAVASTSSLTIDAQTVTDQERIATINYI
                     VTYVLEDGTVVNASIETATINTTEEVAKTTIPVYVELPAGYELATGQSANVTQEVVEN
                     GQNVVTVKVVKKVETTSSTAASVSSAAVTPTSTTENVSSSTTAPTTVEEAKTVLEQVS
                     SEAELLANEANRLVAADSTNEALKTVAVATKLSVSEATVVLNESTATLESVNAQINAV
                     RSNVEALVLELRKYSENGDIVVMLATTSSTSNLTYGLLNQGPGSDFEILQTSGQGAIA
                     DGFTVSPDMDDPAGATITRPIFTETAELKNDPTAGRYTFLVSNLDPYALVNETASRQN
                     LYMTVSRDMTDPTNTDVYVRIVNKDTQILLGETVVSLGDTTKVLNGQIANVTISVPNP
                     ATNSYVPHTLNFTATYEKVTLGGKETDRLEFYYGSAESPDLRTRAVWQSNGLVQKGDP
                     VHKLWSYVPKIATQTTYYRVQGTDELIATYVISGLEGDKFTSSTQRDVTNYEYVSGAQ
                     ESGQISEGYAIGTTAITVAPSRAGVIERRVKTFVSEDGDIVITIQRKAADADDSTYET
                     VYTTGVLDNLKYWTAETTLEGYDATRPYSFPGKTAFWTLYNEFAEANVDTTFYYIEKG
                     SVEVFYVDENGNPLQDSKVAIAHGDTGSGYDTTTLRDAKIVKDGVTYYYKNIDGVGNA
                     GVFAATTHADDERAVEEITAETGTVASNTIKELTYVYVPAGHVNINYVNEAGDVIKAK
                     VVDTVDGEPGTTYDATQDGEKPNTIVAEDGKTYTFKEVSATSAATTGEIEAGVTKEVI
                     YVYEEVKGNVVVNYITTDGTVIQAPVNDTTNASTGTTYDTTDNKPTTITTADGKSYRL
                     VPALTIGNEKGEVVVGTTEVTYVYEEIKGDVVVNYVNTDGEVIAAQVVDTKTTSTGTA
                     YDTTDHKPNKITTETDDVYYYKEVQAGSNETGKVVEGTTEVTYVYEKAGNVVVNYTLA
                     DGTVIKDPVNDETNAEPGSTYTTTDNKPETITTADGKVYKLVPTATVGNEDGQVEAGK
                     TIEVTYIYEEVKSDVVVEYYDTEGNVIAKTVTDTDDASVGTVYNTDEDNRPETITTAD
                     GTVYYYKEVKDSSAPTTGTVAETTTTVQYVYEQAGNVVVNYIAEDGTVIKAPVNDETN
                     AEPGTEYNTADNKPTTITTEDGKTYELIPTATIGTEEGTVEAGKTTEVTYVYKEVKGS
                     VVVNYVTTDGTVLQAPVTDTPETSTGTAYDTTDNKPTTITTADGKTYRLVPKLTVGNE
                     DGTVVAGVTEITYVYEEVKGDVVVNYVNTDGKVIATPVVDTKATSTGTAYDTTDNKPE
                     KIIEDATGDVYYYKEVQTGSNETGKVVEGTTEVTYVYEKAGNVVVNYITEDGTVIKTP
                     VNDETNAKPGSPYDTTDNKPKTITTEDGTTYELVRTDGNENGSVEGGKTTEVTYVYRK
                     VEAPVAKTGNVVVEYYNTAGEKIAADVEDTPETAVGTVYETLDYKPTTITKDGVKYYY
                     KEVKATSATEKGAVTEGTTTVQYVYEPGGSVTVNYVTTDGAVIKSPVKDEENAEPGKS
                     YTTEDNKPTTITTEDGKTYKLVPNATTGDENGTITSGEDKQVTYVYEEVKGNVVVNYI
                     DTEGNVIKTPVEDTKSASTGTAYDTTDNKPTTITTEDGTEYRLVPVLTKGEETGKVVE
                     GTTQVTYVYQKVTTPAPKPNGSVVVNYVNTNGETIAISVNDTTDAKLDTPYDTTDYKP
                     AVIKHDGVTYYYKEVKSGDSETGNVVEGTTEVTYIYEPGGSVTVNYVTTDGAVIKSPV
                     KDEENAEPGKSYTTEDNKPTTITTEDGKAYKLVPNATTGDENGTITSGEDKQVTYVYE
                     EVKGNVVVNYIDTEGNVIKTPVEDTKSASTGTAYDTTDNKPTTITTEDGTVYEIVPVL
                     TIGSESGSVVEGTTQVTYVYRKVSTPTPAVKNGTVVVNYVTEDGTVIKSPVTDTPTSP
                     EGTAYDTTDNKPTEITTEDGSRYVLIPSKTIGSENGTVVEGETVVTYVYKKVANWIPQ
                     IPSTPENPTPVNPVVPYPFDPTNPDKPVDPTTPGTNGEVPNIPYVPGYTPVDPKGNTP
                     LKPVDPNDPGKGYVPPTPDETGKDTPIPYVQNGNVVVNYVTEDGTVIKSPVNDETDAP
                     AGKSYDTTDNKPKTITTEDGTTYELVRVDGSENGKVEGGKTTEVTYVYRKVTPTKKVV
                     TNHVDEEGNPIAPQEEGTTPNKSIPGYEFTGKTITDEDGNTTHIYKKTPTKKVVTNHV
                     DEEGNPIAPQEEGTTPDKSIPGYEFTGKTITDEDGNTTHIYKKTPTKKVVTNHVDEEG
                     NVISPQEDGTTPNKGTSIPGYEYVRTVVDVEGNTTHIYRKVSNKPTPPATETPVKPQP
                     ATPTPTADKAKQLPNTGEASSSAGVLGAAMLVAAIALAGKRRRNED"
     gene            complement(15428..15586)
                     /locus_tag="AC1PJC_000906"
     CDS             complement(15428..15586)
                     /locus_tag="AC1PJC_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619904.1"
                     /translation="MGDKPISFKDKDGNFVSAADVWNAEKLEELFNTLNPNRKFRLER
                     ERLAKEKE"
     gene            complement(16118..17431)
                     /gene="obgE"
                     /locus_tag="AC1PJC_000907"
     CDS             complement(16118..17431)
                     /gene="obgE"
                     /locus_tag="AC1PJC_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002984148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HIP6619905.1"
                     /translation="MSMFLDTAKIKVKAGKGGDGMVAFRREKYVPNGGPWGGDGGRGG
                     DVVFVVDEGLRTLMDFRYNRRFKADDGEKGMTKGMHGRGAEDLIVRVPQGTTVRDADT
                     GKVITDLVENGQEFVIAHGGRGGRGNIRFATPKNPAPEISENGEPGEERNLELELKVL
                     ADVGLVGFPSVGKSTLLSVITAAKPKIGAYHFTTIVPNLGMVRTKSGESFAVADLPGL
                     IEGASQGVGLGTQFLRHIERTRVILHVLDMSASEGRDPYEDYVAINNELETYNLRLME
                     RPQIIVANKMDMPEAAENLEEFKKKLAANYDEFDELPQIFPISGIAHQGLENLLEATA
                     ELLEKTPEFLLYDESDFQEEEAYYGFNPDEPEFDISRADDASWVLSGDKLEKLFTMTN
                     FDRDESVMKFARQLRGMGVDEALRARGAKDGDTVRIGKFEFEFVD"
     gene            complement(17634..17762)
                     /locus_tag="AC1PJC_000908"
     CDS             complement(17634..17762)
                     /locus_tag="AC1PJC_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4044 domain-containing protein"
                     /protein_id="HIP6619906.1"
                     /translation="MAFGEEKHKKTTFEKVTLVIVVVMVVVTLAGLILPAINALMN"
     gene            complement(17934..18371)
                     /locus_tag="AC1PJC_000909"
     CDS             complement(17934..18371)
                     /locus_tag="AC1PJC_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619907.1"
                     /translation="MLDKLQFIANKIESSVKVMQRYITHAVGLLFILCMLLPFAYTTD
                     SENYSVFLVSGWRYFSQNLFSLSSILIFLAFFFINCQGHKNIQLIIFVMAFMLTLYFY
                     CLPILALGEEFWSRIIELPVAYYICGLLMLVGVGLKVKRLVSG"
     gene            complement(18464..20233)
                     /gene="uvrC"
                     /locus_tag="AC1PJC_000910"
     CDS             complement(18464..20233)
                     /gene="uvrC"
                     /locus_tag="AC1PJC_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HIP6619908.1"
                     /translation="MNDLIKHKLELLPDSPGCYLHKNKYGKIIYVGKAKNLRNRVRSY
                     FRGAHDTKTEALVSEITDFEFIVTDSNIEALLLEINLIQENKPRYNIMLKDDKSYPFI
                     KITKERHPRLLITRQIKKDGGQYFGPYPDVGAANQTLKLLERLYPFRKCKLPENKYCL
                     YYHLGQCLAHGENLPSLSDYDKMAKEVAQFLTGHDDKIVKEVQDKMKVAAGNLEFEKA
                     AEYRDVLQSISTLRTKQRVMAHDLQNRDVFGYYVDKGWMCVQVFFVRQGKLIERNVNL
                     FPYYNDADEDFLTYIGQFYRDQQHLIPSEVLIPQDIDQEAVEALVDTKVLKPQRGEKK
                     QLISLATKNARVSLEQKFNLLEKNLEKTYGAVENIGQLLGIPAPVRIEAFDNSNIMGT
                     SPVSAMVVFENGVPNKKEYRKYKIKTVVGPDDYASMREVLQRRYSRVLRDGLTPPDLI
                     IIDGGQGQVNVAKQVIEQELGMSIPIAGLQKNDKHQTHELLFGNPLEVVELPRNSQEF
                     FLLHRIQDEVHRFAIEFHRQVRSKNSFSSKLDGIEGLGPKRKQALMKHFKSISNIQSA
                     SLQEIAEAGVPYKVAEKVKEKLK"
     gene            20473..21216
                     /locus_tag="AC1PJC_000911"
     CDS             20473..21216
                     /locus_tag="AC1PJC_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6619909.1"
                     /translation="MIQFDHITKTYGETIALDDLNLTIESGEIFGLIGHNGAGKTTTI
                     SLLTSIIEASYGTISVDGLNLEENRDEVKKRIAYVPDSPDIFLHLTAFEYWHFMGKVY
                     GVEKDTVDDRIAKLSSLFDMTARQHEPIDSFSHGMRQKTIIIGALIPNPDIWILDEPL
                     TGLDPQASFDLKQMMKEHAQSGHTVLFSTHVLSVAEQLCDRIAILRKGKLIFVGSLDE
                     LKSQYPDKDLETIYLELAGRQQVKAGEEV"
     gene            21213..22823
                     /locus_tag="AC1PJC_000912"
     CDS             21213..22823
                     /locus_tag="AC1PJC_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HIP6619910.1"
                     /translation="MSKSIIWELVKINILYSNPQLLASVKKKQSKRKDASFSAYKSVL
                     LQQVFMVLSFGLLYSVFFMGVDYSQSIGFFSLQLALFTIIAIVYGFTGFFSVFYDSKD
                     TKLYLALPLKPQEVFLAKILSAQGMVLPFLMPCLSLLLITYRQIGGPLLALASIPSFL
                     ILWILVNLVNLIIMHFVGEVLTKSPRKTLISTILMTGSSLLAFAALMFLQSQQTVSLE
                     SGGFVDFPIIPIFAGFHYLVSHTISLETLLHFGLPLILMFGLIVFAFKTVIPNYFNQV
                     LAIENASTKRTNNAKSAKIPSNLNQALVKHHLSTLKDSNLMVQTMIQPIIMGVALFPS
                     FSRFTENGGLSSVGWDFFGIALLAGFLLGSLFAGSTTFIGVAMSLEKENYHFIRTLPI
                     SFKKFIIQKFWVLAAVQFALPTLLYFALALGFMKVKLILAVFFTVGIIISALLTGQIY
                     YWRDQRLLMLNWQNSNQLFGRGAGQWLIAGSIIGTMFLGAIILVVSIILAGTIGAAYV
                     SSALMTLLFVLSAALQLYIYKAYWQKLK"
     gene            complement(22846..23289)
                     /locus_tag="AC1PJC_000913"
     CDS             complement(22846..23289)
                     /locus_tag="AC1PJC_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HIP6619911.1"
                     /translation="MLKAMEVYLVTNGNGLEAIEFYKNALGATVEQVNLFKDFLPDCP
                     AELENYVMNAQFRLNGQRFMLSDNNPEMPYTVGDNITVALITDDAETAQELYSKLSVD
                     ATAINMELQAVPWSPAYGNVTDKFGISWQINAEVEGYGQEYYAEN"
     gene            complement(23378..24133)
                     /gene="ldcB"
                     /locus_tag="AC1PJC_000914"
     CDS             complement(23378..24133)
                     /gene="ldcB"
                     /locus_tag="AC1PJC_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase LdcB/DacB"
                     /protein_id="HIP6619912.1"
                     /translation="MIMKRTILICLPTILLLAACHQKPDQANTTKNSSTVVSTTSSQS
                     ASTTSEQSTSSSTSAETDQEVTSTETQVNFNGSYYSVQGKYGEVIIANKKHPLAADYA
                     PGENPEALAAFQRLIADMQALGFGISNNYSGFRSYETQASLYQSYVNQEGQAAADRYS
                     ARAGYSEHQTGLAFDLLDTSGNLLEEPNASQWLATNAHLYGFIVRYLPGKESSTGYMA
                     ESWHVRYIGQEATDIYNSGLTLEEYFGVPGGDY"
BASE COUNT         6496 a         5458 c         4615 g         7734 t
ORIGIN      
        1 atcttatttt actatttatt gcatattttt tgggatctat cccgtcagga ctttggatag
       61 gtcaaacttt tttcaatatc aacattcgtg aacatggttc gggaaatact ggaacaacca
      121 acacattccg tattttaggt ccgaaggcag gaacgattgt atttgtaatt gattttctca
      181 agggaacgtt ggcagccttg cttccgctga tctttcatgc ccaaggaatt tctccgattg
      241 tatttgggtt aatggctgtc ttaggacata ctttccctat ctttgcccaa ttcaaaggtg
      301 gaaaggcggt tgcaacatct gctggtatgc ttctaggcgt cgcacctgct ttctgtctct
      361 atctggttgt catctttgtg acttctcttt acctcacttc gatggtttcc ttctccagcg
      421 tattggctgc tgctttagca atcttaggag ctctgctatt tccagcaata ggaatcatcc
      481 tgccaagcta cgactggctc tttacagtga ttatcgtctt tttgggccta tttgtcatta
      541 tccgccacaa ggaaaatatc cagcggattt tgaaaaagga agagaacctt gtcccattcg
      601 gactcaatct aaccaaacag aaaaagcgag tttaatcact cgcttttagt ttaccttgac
      661 ttcgaccact tcaatcttct ccccaccaag caaaatcaaa tgacagtcta cacgatctat
      721 cttgtaggct tttttcaatg cctccgcata gagttgcatt tgagcttggt aacgttgact
      781 gagttggctt ggttggtcgt atttgtctgt cttataatca aagaggacaa tatgatcatc
      841 gtacagtagg tagccatcga taatcccacg aaggacaaat tgttcctgtg acaaagaatc
      901 tgtctgcaaa cttgcaaatg gagcttctcg gtggagtttg tccgtattgg ctagaatttc
      961 tcttcctaag tctgtatcga agaaatccaa aatcatctga acattgattt tatctttaac
     1021 cgcttgctca gcatgaacag tttctagagc ttctcttacc gtatcttctg tcaccaacca
     1081 agacagatcc aaacgttgca taagttcatg gactgccgaa ccgacttggg ctccagtgat
     1141 ttttggtttc ttggagaaat ctggcaagtt gaaggtccgt tttggctggt atttttccat
     1201 aacttccatg ccttcttgtt ccaagacagg ctcatagagt ttcttgattt gacttggagt
     1261 ccgtaaactt ggtaattcaa tggcagcctt atagcgttcg ttcaactctt ggacagaaga
     1321 caactggtcc aaggcctggg cgatgtcttc tgattgacga atatctttaa ggctggcgtc
     1381 ttctagctta ttcttcaatt tcagtttacc aatcttctcc tctgtcaaat cctcgtccgt
     1441 tacaaagact ttcttgaagt gcaagtcttc tcctgagaag gcctcatcaa tggctagtat
     1501 ccaatcttgg aaggtcgcta tactttcgcg agttgattgg gcaagtacgc catcttcctt
     1561 cttaccatcg tatttttcag ctaacttgtc agcattgccc tttccaacca gatacagctt
     1621 cttctcggca cgcgttagtg caacgtaaag caaccgcatt tgttctgaaa gattggcaat
     1681 ttttagctct tggagattat tttgataagg aagggtgttc attaagactc gcacctgagg
     1741 caatgggcta tttaccttat ctttcatatc cgctaaatat tggataccta gaccattttt
     1801 ccggctgatg atgactgatt ggtaatggtc ttccaagtta aatcgcttat cgatgttcat
     1861 gaggaagaca tatttgaact ccagaccttt tgacttatga atggtcataa gctgaacagc
     1921 attttgcggt agaaactctt gtacatctgc caaatcctta tcatttgcta aggcacggtc
     1981 aatcatggcg atgaagcggg acaaaccctt gtagcctgtt ttttcaaact ggttggcacg
     2041 cagacctagt gcatatagat tggcctgacg tttgctgcca tttggaagag caccgacata
     2101 gtcatagtag aatttttcat tgaaaatctt ccagatcagg tcataaatag aatgcagttt
     2161 ggcataggca cgccagtttt ccaaaataga caagaaatcc ttgattttct tcttcaactc
     2221 tcctgacata agttcaggat gttgcccatt tgtttgatgg gctatttcca ttttctggta
     2281 aaagaaacct gtcccagcct gcaaggaaat ccgtgtcagt tcatcctcat cgaatcggaa
     2341 cataggcgat ttgagaaggg caaccaaggc atagtcattg agtggattat tgataactcg
     2401 caaggtatcc agcatgatca tgacttctaa agattgcaga taggaggctg ctccgccatc
     2461 tgccacaatt ggaatcccat gtttttcaaa aatggacata atgaggtcat tgtgcgtccg
     2521 tttttgcact aagagagtga tgtccttgaa gtctgctcct tcttcattgt gaagacgaat
     2581 aatctctttt gcaacgacct caatttcacc agcagtcaga ggtgtttctt cctcagcatc
     2641 tgttgaagag tttgcgctat cctgctggtc ataaatcaag tattccatct catgcttggg
     2701 ctgggcaatt ttttgaccag gactaccagc cactagactg tgggtgtcgt catacttgat
     2761 ttcccctact tgacggtcca tcagacgcgt gaaaatagca tttgttgcct ccaagacctc
     2821 aatctgacta cggaagtttt ccttgagtaa tatcaatttc ccagcctgag gattttcctg
     2881 atacaattca aatttctctt ggaaaatcat cggatccgcc tgacggaatc gatagatgga
     2941 ctgcttaata tcgcccacca taaagcggtt gtgaccgtta gacagcaggt ccaacattcg
     3001 ctcttggcta tggttgttat cctggtactc gtccaccatg acttcgtggt atttttcttg
     3061 gaaaaactgg cggatgtctg cattttcttc taaaatacga atagcgaaat gcccaatatc
     3121 accaaactca aaagctgctt ccttgatttt gacatccaga taagcctgcg aaaaatccaa
     3181 gacaaagtca cgtaataata cgagcagtgg caaagcttga atctgatagt ctttcagcag
     3241 ggttaattca tagacttcct gacccaaatc tcgtagtcct gagataatct ggctcttgcc
     3301 agcattgtat tcttctttaa agactatcaa atgctcatct tttggtcgat tggcattggt
     3361 caggcccttg cctctggact ggtcattgat gtgaaggatt ctttcaaccc gttccatcaa
     3421 gtccttctgg tccagactat ctaaacctgt cagcaaatcc aaaacttctt ccacatttgc
     3481 aaaatactta gcggaaccaa agtcatttct gccccattcc acatggtagc ggaagaaatc
     3541 tgcagcttga tagagcttgt ctaacacttt ttccttaaag ccatgctcta agatctgctc
     3601 aatacgctct tgactgtaca aatcagcttg aacagcctgc tctttcagcc atttagttgg
     3661 actgctcgtt gattgactaa aatcatgcac ctgataaaca acctgacgga aaccactatt
     3721 atccttgcgg ttgcccgaaa aattgcgaac cagattgcgg aactcaccat tttcatcctc
     3781 ttcaatataa tctgcaaaga gctggtcaaa aacctctttt ttcagactcg ctttttctgt
     3841 ctcatcctgt aaaatccgaa actgcggaga aataccaagg ctataaccgt aagtcgttac
     3901 caatttctgc gtaaaggagt ccatggtccc aatatcagcc ttggtcaaat ccgccaactg
     3961 ggctgacaaa tgccgacgca agtccatatc cgtcgtctcc gcaatagttt cattgagatt
     4021 tttctcaatc cgctccttca actcaccagc cgctttgact gtaaaggtcg agataaagag
     4081 ctggtcaatc ccgacaccac gcttcaactt atccaaaatc cgttgaacca taacgaaggt
     4141 cttgcctgac ccagccgatg cagagaccag aacattctga ccgtgcgtgt agatggcttc
     4201 aatctgctca ggtgtgcgtt tttgttgctt atcagaattg gcttccgcca gctgcacagc
     4261 cttgatttct tccgcgctta aaaattgttc aaaagccatt agtcctgacc tcctttcatt
     4321 cgttccatcc aatcttgacg cttgacctct ttgaccaacc gccgtgccat gcccatgtgc
     4381 cgatccgcct caaaaccagt gattgccttc agctgctcac ctgccaccga acgcccatct
     4441 ttggtataag gattaatagc aaagcgacca tccaggatgt ccttggcagc ttgtttgtag
     4501 agttcttggt tgtggttcaa taacaccgca aactcatctt ccgtatagag ttggttacga
     4561 gtctgataaa aatgattgag ccccagactt tcctccttca agaaaagccc cttgtaaacc
     4621 aagctagtat tggcagctcc ttctagctgt tctaaattct tcgtgtcttt taatttgata
     4681 atcggatcct gcaaatgcaa atacatagct ccaaaaacag gtttatcctt ggtttcatcc
     4741 agctcttgta aggctgccaa gtaggtcacc aactgaggtt tgagaccatt gtaaaaatcc
     4801 ccaactgaaa aagattggtc actggacttg taatccacaa caccgacagc ctgattaatt
     4861 tgtaaggtat ccaagcggtc aatagtacca tttacatgca cactcttgcc attttgaagg
     4921 tcaaaaacta gcgccttatc ctggcggaaa ctcttttcct gaccatcaat ttccaccaaa
     4981 tcattatccc gcaaaatagt cgcactggaa cgagcaatct tatccagcac ctcctccgta
     5041 tagcgagcat ccgcatcctg gttataaaac atagcaaatt ctgcctcgtc acgcgtacgc
     5101 aggatggcct tgtccacttt ttgatcaaaa tctagctcag attggtccat gaccactcgt
     5161 tcaaaaatcc gatgcaagaa gagcccgtgt tgaaaggccg tcggatggat ggattcctgt
     5221 tcccgcaagc gaagcacatt gcggacaaag taaaggtatt ggttattgta gaaattggtc
     5281 aagctggatg cagaaagatt gagcggctta tcctctggat ataaagcagc caaggtttca
     5341 tctgaaagtt gtttagaagc aatatcacca gtaatggtcg gaatttcaat gccttgcgac
     5401 tccaatttct tcttcaaatg gcgaaccaag actgtccaga aggccctctg cccttcccac
     5461 tcctctgttt caaggcttgg tctttccgac tcaatcaaac gggataagag actcttgtag
     5521 tgaccgatat cttgtggact aagtgtttta atccgaccac gttcttcgga tttcaacccc
     5581 attttttgga gaatcttgat ataaggggag agactatctt cgccttcgtt ataaatctga
     5641 ggagtagaaa taactaactg ttccgtcgca gcattaagca gagacatcat ggcaacatgg
     5701 ttcttcttga tattctctcg actgaccaaa tcaaaacgtg aagaactagc cgaaacaaga
     5761 ttgacttttt ccatctcttc ttctgtcaat agactggtat tcttggcaac ttttggaaaa
     5821 ttagactggc ccattccgat agcataaaca tactttgcag tgtgcggctc aatcaaatca
     5881 taggatttga cattgaccac atcaaccgtt gcaggaacgg tacgatagtg actggcctgc
     5941 ataccagcct gtaaaatagc cagaaaatca tccattttca acttttcttt tccgaaaatc
     6001 tgatgaaaat tctcgagaat atgggtaaaa cttttccaga cctgctcttc tttttcttgc
     6061 tctacttcgc tcaaatttcg agacattttt tccatatttt gaggaagctc aattacctcc
     6121 aaaaatgcca taaatttctc aagcaaggca gttccagatt gtggtccagc cttaaacagc
     6181 tggttcaaag gttccataat cttagcacgt aggggttcca aaacattcaa atcatataca
     6241 agccttttct ccttgatgac ttcaacatca tagtctgctc tgccattgac cgaaaaagcc
     6301 ctcgaaaaag cagcctgccc cttcatatcc gcaaaaagga tgtaagactc aaataggtcc
     6361 agctcctttt gggaaatgct ggcgtacaaa ccagatttga ggagattgaa caggtcttcc
     6421 gctcggaaac gatagcgacg taagcgttcc aaggactcca caaaatggac caacggatga
     6481 tgactcatct cctctgcctt accgaaatag taaggaatgt catacttgtc aaaaatcttg
     6541 ccaatctgca acttgtagct atccacatca cccaagagca acaagatgtc tttatagcga
     6601 gccccttgat gcacatgctg acgaattgca gtcgcaactt gctccacttc ttctttttgg
     6661 ttaacaactt cccagagttg gattttttct tggtcttctg gagtcaagtc aagcatggtc
     6721 ccgctgtagt cataataggc ttccatattc tttgaaaatt taccgatact gtccaagact
     6781 ggctcttgac caatataagt agccttagtc tggaactgcg ctgataactg acgtaaaaag
     6841 tcaacgttgg cttgatagac attgccttcc gcataggtcg cttgcacagc tttcttgctg
     6901 gcatatacac caatcaggat ttccgaaacc cgttcattta aagcacttac taaagcttct
     6961 tcttctgccg aaaaacgaga aaatccgtct accaccagca caatgttctt caactgctca
     7021 tccaactgac cagtatctac caagctagtc agctgtgcta acttagactg atgctcaaaa
     7081 ccttctttgg acaaaatgtc tgttacagcc agaaaaatct ttaccaaatc agcctgctta
     7141 tctggtgagt ccatggcttc caagtccaaa atagacatat ttgcccgttg caattctttg
     7201 tataaagcaa ctagctggtt aatgaaacca aaatctgtct gcaaacgacc atagactttc
     7261 aagtcgccat cttcaaattg cgatagaaca cgaaagaaaa tcatggccag accaacatca
     7321 tccagcggtt gacctgcttc tttcctatca atcatcaaat agcgggccaa ttgcccaaaa
     7381 cgggtcacga taatatcaaa agttgcctgt tcaggcaggt attccaagac cttgcgttcc
     7441 atctcaaagg atagggagtt tggagcaata taaaaaactc gcttagcttc cttagcaaat
     7501 tctgccgcgg tatccgttaa atactgcgtc agaggattcc gaatatctgt atagactaat
     7561 ttcatatcaa attctcattc tttcgttgaa tatactatgt ctagtatatc aaaattcaaa
     7621 caaaaaaaat ggtccaatgg accatttttt cagaaaggta attctttcta catttatcta
     7681 aatttcttca cttattctat cgggggaaga attcgtgtaa agaaatataa ttagtcttcg
     7741 ttacgacgac gtttgcctgc aagagcgatt gcggcaacca gcatcgctgc accaaggacg
     7801 ccagctgaag atgaagcttc gccagtattt ggcaattgtt tcgccttatc agcagttgga
     7861 gtcggagttg ctggctgagg cttcacagga gtttctgtag caggtggggt cggcttatta
     7921 gaaactttgc gataaatatg cgttgtgtta ccttcaacat caactacagt acgtacatat
     7981 tcataacccg gaattgaagt acctttgttt ggtgttgtac catcttcttg tggtgaaatc
     8041 acattacctt cttcgtcaac gtggtttgtt acaactttct tagttggtgt tttcttgtag
     8101 atgtgggttg tatttccatc ttcgtcagta atcgtcttac ctgtgaactc atatcctggg
     8161 attgatttat caggtgttgt accttcttct tgcggcgcaa tcggattacc ttcttcatca
     8221 acgtggtttg ttacaacttt cttagttggt gttttcttgt agatgtgggt tgtattgcca
     8281 tcttcatcag taatcgtctt acctgtgaac tcatatcctg ggattgactt gttcggtgtt
     8341 gtaccttctt cttgcggtgc aatcggatta ccttcttcat caacgtggtt agttacaact
     8401 ttcttagttg gagtcacttt acggtaaacg taggttactt cagtagtctt accaccttca
     8461 actttaccat tttctgaacc gtcaacacga acaagctcat aagttgtacc atcttctgtc
     8521 gtgatagttt ttggtttgtt gtcggttgta tcataagatt tgccagctgg tgcatctgtt
     8581 tcatcattta caggcgactt gatgactgta ccatcttctg ttacatagtt aaccacaaca
     8641 ttaccatttt gaacgtaagg aattggtgta tcttttccag tttcatctgg agttggtggt
     8701 acataacctt tacctggatc atttggatca accggtttca atggtgtatt ccccttagga
     8761 tcaactggtg tgtatcctgg aacataagga atatttggaa cttcaccgtt tgttcctggt
     8821 gttgttggat caaccggctt atcaggattt gttgggtcaa acggataagg gacaactggg
     8881 ttaactggtg ttggattttc cggtgttgac ggaatttgtg gaatccagtt cgcaactttc
     8941 ttatacacgt aagtaacaac cgtttcgcct tctacaactg taccattctc tgaaccaatt
     9001 gtcttagacg gaattaatac ataacgtgaa ccatcttccg ttgtaatttc agttggtttg
     9061 ttatcggttg tgtcgtatgc tgtaccttct ggagaggttg gtgtatctgt cacaggtgac
     9121 ttgatgactg taccatcttc tgttacataa ttaacaacaa ccgtaccatt cttaactgct
     9181 ggagttggtg tagatacctt acgataaaca taagttacct gtgttgtacc ctctacgaca
     9241 gaaccagatt cagaaccgat tgtcaatact ggcacgattt catagacagt accatcttca
     9301 gtcgtgatag tagttggttt gttgtcggtt gtgtcgtatg ctgtacctgt tgatgcagac
     9361 ttagtatctt caacaggtgt cttgataaca ttaccttctg tatcaatata gttaacaaca
     9421 acatttcctt tcacttcttc gtaaacatag gttacttgct tatcttcacc tgaagtgatg
     9481 gttccatttt catcacccgt tgttgcgttt ggaacaagtt tgtaggcttt accgtcttcg
     9541 gttgtgatgg ttgttggttt gttgtcttct gttgtataag acttacctgg ctcagcgttt
     9601 tcttcatcct tcacaggaga cttgatgact gcaccatcag tcgttacata gttgactgtg
     9661 actgaaccac ctggttcgta aatgtatgtg acttctgttg taccttcgac aacattacct
     9721 gtctcgctat caccagattt cacttccttg tagtagtatg taacaccgtc gtgtttgata
     9781 acggcaggct tgtaatctgt tgtatcgtat ggtgtatcca atttagcatc tgttgtatca
     9841 tttactgaaa ttgcaattgt ttcaccattt gtattgacat aattaacaac gacactacca
     9901 tttggttttg gagcaggagt tgttactttt tggtatacat acgttacttg tgttgtacct
     9961 tcaactactt tacctgtttc ctcacctttt gttaatacag gaacaagtct gtactctgta
    10021 ccatcttcag tcgtgatagt agttggtttg ttgtcggttg tgtcgtatgc tgtacctgtt
    10081 gatgcagact tagtatcttc gacaggtgtc ttgataacat taccttctgt atcaatatag
    10141 ttaacaacaa catttccttt cacttcctcg taaacataag ttacttgctt atcttcacct
    10201 gaagtgattg ttccattttc atcacccgtt gttgcgtttg gaacaagttt gtaggtctta
    10261 ccgtcttcgg ttgtgatagt tgttggcttg ttgtcttctg ttgtataaga cttacctggc
    10321 tcagcgtttt cttcatcctt cacaggagac ttgatgactg cgccatcagt cgttacatag
    10381 ttgactgtga ctgaaccacc tggttcgtaa acatattgaa cagttgttgt accttcggtt
    10441 acagcacctt tctcagtagc agatgtcgct ttaacttctt tatagtagta tttcacgcca
    10501 tctttagtga ttgttgttgg tttgtaatca agggtctcat aaactgtacc aacagctgtt
    10561 tcaggtgtat cttcaacatc cgctgcgatt ttttcaccgg cagtattgta atattcaact
    10621 acaacattac ctgttttagc aaccggtgct tctactttac gataaacata ggttacttcc
    10681 gtagttttac caccttcaac tgaaccattc tcatttccat ctgtgcgaac aagttcatat
    10741 gttgtaccat cttcagtagt aattgtcttc ggtttgttat cagtcgtatc atacggacta
    10801 cctggttttg cgtttgtttc gtcattaaca ggtgtcttga tgactgtacc atcttctgtg
    10861 atgtagttaa caacaacatt accagctttt tcgtatacat aagtaacttc tgttgtacct
    10921 tctacaacct tgcctgtttc atttgaacca gtctgaacct ctttgtagta gtatacatca
    10981 ccagtcgcat cttcaatgat tttctctggt ttgttgtctg ttgtatcgta agctgtacct
    11041 gttgatgttg ctttagtatc tacgactgga gttgcaataa cttttccgtc agtattgaca
    11101 tagttaacaa caacatcacc tttcacttct tcgtaaacat aagtgatttc agttacacct
    11161 gccacaacag tgccatcttc attaccgact gtaagttttg gtacaaggcg atatgtctta
    11221 ccatctgcag ttgtgattgt agttggtttg ttgtctgttg tgtcgtaagc tgtacctgtt
    11281 gatgtttctg gtgtgtctgt aacaggcgct tgaagaactg ttccgtcagt agttacgtag
    11341 ttaactacaa ctgaaccttt cacttctttg tagacatagg tgacttctgt tgtcttacct
    11401 gcttcaactg taccttcttc agtaccgatt gtcgctgttg ggatcaactc gtaagtctta
    11461 ccatcttctg ttgtgatagt agttggtttg ttgtcagctg tgttgtactc agttcctggc
    11521 tcagcgtttg tttcatcatt cactggtgcc ttgataactg taccatcttc agcaatgtag
    11581 ttaacaacca cgttaccagc ttgttcgtaa acgtactgaa ctgttgttgt cgtctctgct
    11641 actgtaccag ttgttggtgc agaagaatct ttcacttctt tgtagtagta aactgtgcca
    11701 tctgctgttg tgatagtttc tggacggttg tcttcatctg tgttgtagac tgtgccaact
    11761 gaagcatcat ctgtatctgt tacagttttc gcaatgacat tgccctctgt atcgtagtat
    11821 tctacaacga cgtcagactt aacttcttcg tagatgtaag ttacttcgat agtcttacca
    11881 gcttcaactt gaccatcttc gttaccaact gttgcagttg gaacaagttt gtagactttg
    11941 ccatctgctg ttgtgattgt ttctggctta ttgtccgttg ttgtgtaagt agaacctggt
    12001 tctgcatttg tttcatcgtt tactggatct ttgatgactg taccatctgc caatgtgtag
    12061 ttaacaacaa cattaccagc tttttcataa acgtaagtaa cttctgttgt gccttctaca
    12121 accttacctg tttcgtttga accagcttga acttctttgt agtagtaaac atcatcagtt
    12181 tcagtagtga ttttatttgg cttgtgatca gttgtatcat aggctgtgcc agttgaagtt
    12241 gtcttggtat ctactacttg tgcggcaatt acttcaccat cagtatttac atagttaaca
    12301 acaacatcac ccttaatttc ttcatacaca taggtaactt ctgttgtacc aacaacgact
    12361 tcgccttttt cattaccaat ggtaagtgca ggaactaaac gatatgattt accatctgct
    12421 gtagtgattg ttgttggttt gttatctgta gtatcgtaag tcgtacctgt tgaagcattt
    12481 gttgtatcat ttacaggtgc ctgaataacg gtaccgtctg ttgtaatgta gttaacaaca
    12541 acattacctt ttacttcttc ataaacgtag ataacttctt tagtaacacc tgcctcgatc
    12601 tcgccagttg ttgccgctga agttgctgaa acttctttaa atgtatatgt cttgccatct
    12661 tctgcaacaa ttgtatttgg tttttcacca tcttgtgtcg catcataagt ggtccctggt
    12721 tccccatcaa ctgtatcaac aactttagct ttgataacat cgccagcttc gttgacatag
    12781 ttgatattta catggccagc aggaacataa acataggtca gttctttgat agtattgctt
    12841 gctactgttc cagtttcagc ggtaatttct tctactgcac gctcatcatc tgcatgtgta
    12901 gtcgcggcaa acactcctgc attgccaaca ccatcaatgt ttttgtagta gtaagtaacg
    12961 ccatctttga caattttagc atcacgaagt gtagttgtat cgtagcctga gcctgtatct
    13021 ccgtgagcaa tggctacctt actatcttga aggggatttc cattttcatc aacatagaaa
    13081 acttcaactg aacctttttc gatatagtag aaagttgtat caacatttgc ttctgcaaat
    13141 tcattatata gtgtccaaaa tgcagtttta cctgggaatg agtatggacg tgttgcatcg
    13201 tacccttcga gtgtggtctc tgccgtccaa tatttcaaat tatccaaaac acctgttgta
    13261 taaacagtct cataagtaga atcatctgca tcagcggctt tacgttgaat ggtaataaca
    13321 atatctccat cctctgaaac aaatgttttc acacggcgct caatgacccc agcacgtgaa
    13381 ggagcaactg tgattgctgt cgtaccaatg gcatatcctt ctgaaatctg tcccgattct
    13441 tgtgcacctg aaacgtattc gtaatttgtc acatcacgct gtgttgaaga agtaaattta
    13501 tcaccttcaa gaccactaat aacataggtt gcaatcaatt catcagtacc ttgtacgcgg
    13561 taataagtcg tttgagtagc aattttcgga acataactcc aaagtttgtg aactggatct
    13621 cctttttgca ctaaaccatt agactgccaa acagctctag tacgtaaatc aggagactcc
    13681 gcactgccat aataaaactc taaccgatct gtctcttttc ctccaagcgt tactttttca
    13741 taagtagcag taaagtttag ggtatgagga acgtatgagt tagttgctgg attaggaact
    13801 gaaattgtta catttgcgat ttgaccgttc aaaacttttg ttgtatcccc aagagataca
    13861 acggtttcac caagtagaat ttgtgtatcc ttgttgacga tacgaacata cacatctgta
    13921 ttcgttgggt cagtcatatc tctagaaaca gtcatataca aattttgacg actggctgtt
    13981 tcattaacca atgcgtatgg atcaagatta gaaacaagga aagtatagcg acccgcagtt
    14041 ggatcattct tcaattctgc agtttctgta aaaattggac gtgttattgt agcacctgca
    14101 ggatcatcca tatctggcga cacagtaaat ccatctgcaa ttgcaccctg acctgatgtt
    14161 tgaagtattt cgaagtccga gcctggtcct tggttaagca aaccataggt aaggttgctt
    14221 gttgatgaag ttgttgccaa cattacaaca atatcaccat tttctgagta cttacgtaac
    14281 tcaagaacaa gcgcttcaac gtttgaacgc accgcattga tttgagcatt cacggattca
    14341 agcgttgcag ttgattcatt taataccact gttgcctcag atactgacaa ttttgttgcc
    14401 actgcaactg ttttcaacgc ttcatttgta ctatctgccg caaccaaacg attagcctca
    14461 tttgctaaaa gctctgcttc cgaagatact tgttcaagaa ccgttttagc ctcttctact
    14521 gttgtaggtg ctgtagttga agaagatacg ttttcagttg ttgatgtagg tgttacggct
    14581 gcagaagata cgcttgcagc tgttgatgaa gttgtctcaa cttttttaac tactttaact
    14641 gttacaacat tttgaccatt ttctacaact tcttgagtca catttgcgga ttgacctgta
    14701 gccaactcat aacctgctgg tagctcaaca taaactggaa tagttgtctt agccacttct
    14761 tcagttgtat tgatcgttgc agtttcaatg cttgcattca caaccgtacc atcttccaat
    14821 acatatgtaa cgatatagtt aattgttgct atacgttctt ggtcagtgac agtctgagca
    14881 tcaatagtca aacttgaagt tgaagcaaca gcttcctcgg tacttgtgct tacttctgtc
    14941 gaagtagccg atgtactact tgcagttgtt gcatctgaag atgctgctgt ctcttctgct
    15001 ttaacagttt gtgcaccagc ccccataacc aatgacatac caagcaagac acttgcagca
    15061 ccaaaatgat acttacggat tgagaaatgt tgcttcattc cgtaccaatt aaacgacttt
    15121 ttcttagctt tacgcatcga aaaaacctcc cccaattttt tatttattaa ttacaaaaat
    15181 tttacagatt tacaaaaaat ccttgaaaaa ttcagtaatt gtttatggta ttatactata
    15241 aataattgtc agcgccaaat aatatggctc tatcttcata aagattatat cttatttgaa
    15301 atataatgaa tatatgcaca atttatacgt ctaaaatgca tttttaagaa taataatgat
    15361 aactatcgcg ttttaaagta gatataaaaa atctgcctgt tttacgctaa caagcagatt
    15421 ttggtatcta ttctttttct tttgccaatc gttctctttc taaacgaaat ttccgattag
    15481 gattaagtgt attaaaaagt tcttctaatt tttcagcatt ccatacatca gctgctgaga
    15541 caaaatttcc atccttatcc ttgaaggata ttggtttatc gcccatataa acctccaact
    15601 attttataga ctgtatacaa acgatcatta actgaatgaa attagtaagg tagctagcca
    15661 aggtcccccc taggacttgg cgtagtttga ctagaggctg ggcaaaagcc tagcaccact
    15721 ctttagagtt cgtgtcaaca tctcagcgca gtggttgatt ggcagatttg ttcgtgtttt
    15781 acactccaaa tctgacctaa tcaactgtgc gggggtggga agacgaactc ttttttaact
    15841 agtcgagttc tttcccactc ccagtcaaac tgcttacctc gctttcgaat ttttaggctc
    15901 gggttaaaac tgtccaacgg acatggtcgc tttcgttttt caaggcgact agctgaaaca
    15961 gttcaccaaa ctgtttcact ccactggaca ggctacgaca tggagtacag gcagtcgata
    16021 ccactgcctg tgcggaatta gtaaggttgg taggtagtcc gccgtagcgg ctaccgtatc
    16081 acatcaagtc ctttaggact tagatgtgat tccaacgtta atccacaaac tcaaattcaa
    16141 acttgccgat tcggacggta tcgccgtctt tggcaccacg cgcacgcagg gcttcatcga
    16201 cacccatgcc acgcaactgg cgagcaaatt tcatgacaga ttcgtcacga tcaaagttag
    16261 tcatggtgaa gagtttttct agtttgtcac cagatagaac ccagcttgca tcgtctgcac
    16321 ggctgatatc aaattctggc tcatctgggt taaagccata gtaagcctct tcttcttgga
    16381 aatctgattc gtcgtagagc aagaattcag gcgttttctc tagcaactca gctgtggctt
    16441 ccaaaagatt ttccaaacct tggtgagcaa tccctgaaat tgggaaaatc tgtggcagtt
    16501 cgtcaaactc gtcgtagttg gctgctaatt tcttcttgaa ctcttccaga ttttctgccg
    16561 cttctggcat atccattttg ttggcaacga taatctgagg acgctccatg agacgaagat
    16621 tgtaggtttc caattcattg ttgatggcta cgtaatcttc ataaggatca cggccttcac
    16681 ttgctgacat gtccaaaaca tgcaagataa cacgtgtccg ctcgatgtga cgaaggaatt
    16741 gcgttcccaa tccaacacct tgactagcac cctcaatcaa acctggtagg tctgccacag
    16801 caaatgactc gccagatttg gtccgaacca ttcccaaatt tggcacaata gttgtaaaat
    16861 ggtaggcacc aattttaggt ttagctgctg taataacact gagaagcgtt gattttccaa
    16921 ctgatgggaa acctacaaga cctacatcag ccaacacttt caattctaat tcaagattgc
    16981 gctcctcacc tggttctcca ttttcagaaa tctcaggcgc tggattctta ggtgtcgcaa
    17041 aacgaatatt tccacgacca ccacgaccac cgtgggcaat gacaaattct tgaccatttt
    17101 caaccaagtc ggtgatgacc ttgccagtat ccgcatcacg aacagttgta ccctgtggta
    17161 ctcgaacaat caggtcttcc gcaccacgac catgcatgcc cttggtcatc cctttttcgc
    17221 catcgtcagc tttaaaacga cggttgtaac ggaagtccat gagagtacgc aagccttcat
    17281 ctacaacaaa aacaacgtct ccgccacggc caccatcacc gccccaagga ccgccattag
    17341 gtacatactt ttcacggcgg aaggcaacca tcccgtcgcc acctttccct gccttgacct
    17401 taatcttggc agtatctaaa aacatactca taatttaccc tattctttcc tagaaaaaaa
    17461 cgcttaaaag cgttttagac ctgtattcac aagcgaagtg cttatatata agaaatcgtt
    17521 tttagccaat caaggtagtt tttcaaaata ctgactgtat tttgaaaaaa actaacgatg
    17581 agtgcttaaa aactagcctt agtatagaag tgctgaacag tgaatacaga ttcttaattc
    17641 atcaatgcat taatggctgg taaaatcaag ccagctaatg tcacgacaac catcacgaca
    17701 acaattacta aagttacttt ttcaaatgtt gttttcttgt gtttttcttc gccgaacgcc
    17761 attgctttct ccttaatcag tcattgataa ttcattttac cataaattag tagagctttc
    17821 aaatctcatc tctagctgcc agaagacaag atttaccaga ttatcttaaa aggactgctt
    17881 tccagctttt gactagaaag acagtcctcg tgcttttcag aaatattagg caattaacca
    17941 gataccaaac gttttacttt taatccaact ccaacaagca taagtaaacc acaaatgtaa
    18001 taagcaacag gcaattcgat tatacgactc cagaattctt ctcctagagc caggatgggt
    18061 aagcaataaa aatacaatgt aagcataaaa gccatgacaa aaataatcag ttggatattt
    18121 ttatgacctt gacaattgat gaaaaagaat gctaaaaaga ttagaataga ggacaaggaa
    18181 aacaagtttt ggctgaaata ccgccaacct gacacaagga aaacagaata attttcactg
    18241 tccgtagtat atgcaaacgg cagtaacata cacaatatga acaacaatcc aactgcatgt
    18301 gtgatatatc tttgcataac ctttaccgaa ctctctattt tgttagcaat aaattgaagt
    18361 ttatcaagca cttgatatgt atattatgat atataatacc gagattgtaa agtatttcga
    18421 tgtattttta ttagattttt ggatattatt acaccgtttg gttttacttc aacttctcct
    18481 taaccttctc cgccacctta tacggcacac cagcttctgc gatttcttgc aggctggccg
    18541 actggatatt gctaatagac ttgaaatgct tcatcagagc ctgtttgcgt tttggtccca
    18601 agccttctat gccgtccaat ttggatgaga aggaattttt tgaccgaacc tgacgatgaa
    18661 actcgatagc aaagcggtga acttcatctt gaatccgatg caggaggaaa aattcctgtg
    18721 aattgcgagg taactcaact acttccaatg gattaccaaa gagcaactcg tgggtctggt
    18781 gcttgtcatt cttctgtaaa cctgcaatgg gaatagacat gcccaactcc tgctcgataa
    18841 cctgcttggc gacattgact tgcccctgac caccgtcgat gataatcaaa tcaggcggtg
    18901 tcaaaccgtc ccgtaacacc cgactatacc gccgctgcaa cacttcccgc atagaagcat
    18961 agtcatctgg ccccaccacc gtcttaatct tgtacttgcg gtattctttt ttattaggca
    19021 ccccattttc aaagaccacc atagccgaca caggactggt ccccatgatg ttggagttat
    19081 cgaaagcctc aatccgcaca ggcgccggaa tccccaaaag ctgaccgata ttctccaccg
    19141 caccgtaggt cttctccaga tttttctcca acagattaaa cttctgctcc agactaacac
    19201 gcgcattctt ggtcgctaga ctgatgagct gcttcttctc gccacgctgg ggcttaagca
    19261 ccttggtatc caccagagct tctacggctt cttggtcaat atcctgcggt atcaagacct
    19321 ctgagggaat caaatgttgc tggtccctgt aaaactgacc gatgtaggtc aaaaagtctt
    19381 cgtccgcatc attatagtat ggaaaaagat tgacattccg ctcaatcagt ttcccctgcc
    19441 gaacaaagaa aacctgcaca cacatccagc ctttgtccac gtagtagcca aagacatccc
    19501 gattctgcaa gtcatgagcc atcactcgtt gcttggtccg tagggtggaa atggattgca
    19561 ggacatcacg gtattccgca gccttttcaa attccaaatt gccagcagcc accttcatct
    19621 tgtcctgcac ttccttgaca atcttatcat catgacccgt caagaattgg gctacttcct
    19681 tggccatctt atcatagtca gacaggctgg gcaggttttc cccgtgagcc aaacattgcc
    19741 ccaaatgata ataaagacaa tacttgttct caggcaattt acacttgcgg aaaggataga
    19801 ggcgctccaa tagtttgagg gtctggttgg ccgcacccac atctggatag ggaccaaaat
    19861 actgaccgcc atccttctta atctgccgtg taatgagcag ccgtgggtga cgttctttag
    19921 taattttgat aaaaggataa gacttgtcat ccttgagcat gatgttatag cgaggcttgt
    19981 tttcctgaat cagattgatt tccaacaaga gggcctcgat attagaatcc gttacgatga
    20041 attcaaagtc ggtaatttca gatactaagg cctctgtctt ggtatcatgg gcaccacgaa
    20101 aataagaccg cacccgattg cgcaggtttt tggccttgcc cacatagata atcttaccgt
    20161 acttgttttt atggaggtaa cagccagggc tatctggtag taactccaac ttatgcttga
    20221 tcaaatcgtt cataggtcta ttatagcaaa ttttctgata atcgagctta ttgcattcct
    20281 ttttacactc gacttcttga aatatatccg tatccatact acaaaaatat tgatagaaac
    20341 tattgctttt gtactaattc agcagtataa taaatgtaat taattgtata tattattcga
    20401 agaacatttg gaataaggct tggaatactt acaagcccct acttttagtt cacgaataac
    20461 aaggaggtta ttatgataca atttgaccat atcacaaaaa catacggcga aacaatcgcg
    20521 cttgatgacc taaatttgac aattgaaagc ggcgagattt tcggcctaat tggacataac
    20581 ggggcaggaa aaacaacgac aatcagtcta ttgacttcga taatcgaagc cagttatgga
    20641 actatctctg ttgatggttt aaacctagag gagaaccgtg atgaagtcaa aaaacggata
    20701 gcctatgttc cagattcgcc agacatcttc ctacacttaa cagcatttga atactggcac
    20761 tttatgggca aggtctatgg tgtagaaaag gatacagttg atgaccgtat cgctaaacta
    20821 tctagtctat ttgatatgac agcgcgccaa catgagccta ttgacagttt ttcacacggt
    20881 atgcgtcaga aaaccattat tattggtgca ttgatcccta atcctgatat ttggattttg
    20941 gatgagcccc taactggact ggatcctcag gcctctttcg acctaaaaca aatgatgaaa
    21001 gaacatgctc aatctggtca caccgttcta ttttctacac acgtcctttc agtagctgaa
    21061 caactctgtg accgcattgc tattctccga aaagggaaac tcattttcgt aggaagtcta
    21121 gatgaactca aatcacagta tccagataaa gatttggaga ccatctattt ggaattagct
    21181 ggacgccaac aagtgaaggc aggtgaggaa gtatgagtaa atccatcatt tgggaattag
    21241 taaagattaa tattctttat tccaaccctc aacttctagc ttccgtcaag aagaaacaaa
    21301 gcaagcgcaa agacgcctcc ttttcagcct ataaaagtgt cctcttgcaa caagtattta
    21361 tggttttgag tttcggactt ctctattctg tctttttcat gggagtagat tatagtcagt
    21421 ccatcggttt cttttctctg caactagcgc tctttaccat tattgccatt gtctacggtt
    21481 ttacaggttt cttctccgtt ttctacgata gtaaggatac aaagttgtat ttagcacttc
    21541 ccctgaagcc acaagaagtc ttcctcgcta aaatcctctc tgcacaaggg atggtcctac
    21601 ccttcctcat gccgtgtctg tctttacttc taatcactta ccggcaaatt ggcggtccgc
    21661 tcctcgcctt agcttccatt ccttcctttt tgattctctg gattttagtt aatttagtca
    21721 atctgattat catgcacttt gttggggaag ttctgacaaa aagccctcgt aaaacattga
    21781 tttctacaat cctgatgaca ggttcttcct tgctggcttt tgctgcgctc atgttcctgc
    21841 aatctcagca gaccgtttca ctcgaatctg gtggctttgt tgattttcct atcataccca
    21901 tatttgctgg attccattac ttggtcagcc atactatatc actagagaca ctccttcatt
    21961 ttggacttcc tctcattttg atgtttggac ttattgtgtt tgcgtttaaa actgtcattc
    22021 ccaactactt taatcaagtt ttggcgattg aaaatgcttc gacaaaacgg accaataatg
    22081 ctaagtctgc caagattcct agcaatctca atcaggcttt agtgaaacac cacctatcta
    22141 ctcttaaaga tagcaacctc atggtccaaa ccatgataca accaatcatc atgggagtgg
    22201 cgctttttcc aagttttagc cgtttcacgg aaaatggtgg tctaagttca gttggatggg
    22261 atttctttgg tattgctcta ttagctggat tcttgcttgg cagtctattt gctggttcta
    22321 caaccttcat cggagtggcc atgtcattgg aaaaggaaaa ttatcatttc attcgaacgc
    22381 ttcctattag tttcaaaaaa tttatcatcc aaaaattctg ggtattggct gccgtgcaat
    22441 ttgcactacc aactctactt tactttgctt tggctctagg tttcatgaaa gtcaaactca
    22501 ttctagcagt cttctttaca gtcggcatca tcatttcagc cctgctaact ggtcagattt
    22561 attactggcg tgaccaacga ctcctcatgc tcaactggca aaatagtaac cagttatttg
    22621 gtcgcggagc ggggcaatgg ttaattgctg gatcaatcat aggaacaatg tttctcggag
    22681 ccattattct agttgtcagc atcatattag ctggcactat tggtgcagct tatgtaagct
    22741 cagccttgat gaccttacta tttgttctat ctgctgctct tcaactttat atctacaaag
    22801 cttattggca aaaactaaaa tagattggac gttgtccaat ctattttagt tttctgcgta
    22861 atattcctga ccgtagcctt ctacttcagc attgatttgc caagagatac caaacttgtc
    22921 tgttacatta ccataggcag gagaccaagg aactgcttga agttccatat tgatagcagt
    22981 tgcatctacg gataacttgc tgtatagttc ctgcgctgtc tcagcatcgt ctgtgataag
    23041 cgcaactgta atattgtcac ctactgtata aggcatttct gggttgttgt ctgacaacat
    23101 aaaacgttga ccattcaaac gaaactgtgc attcatcacg taattttcta gttcagcagg
    23161 gcagtctggc aagaaatctt taaatagatt tacttgctcc actgttgccc caagagcatt
    23221 tttataaaac tcgatggctt ccaaaccatt accattagta accaagtata cttccattgc
    23281 tttaagcatg atggacctcc aaaattatga tggtttatta tatcacgagt tagttatacg
    23341 gacaaatttt tcgacttatt tctgactaaa tgtaaaatta gtaatctccg cctggtacac
    23401 caaaatattc ttccaaggtc aagcctgaat tgtaaatatc tgtcgcttct tgaccaatat
    23461 atcgcacatg ccaggattct gccatatagc ctgtgctaga ctcttttcct ggaagatagc
    23521 ggacaataaa gccgtataga tgtgcattcg tagccaacca ctgagaagca ttgggctctt
    23581 ctaataaatt accacttgta tccaataaat caaaggctaa tcctgtctga tgttcactat
    23641 atccagctct tgcagaatac ctatctgccg ctgcttgtcc ttcctgattt acataagact
    23701 ggtagagact tgcctgagtt tcataggaac gaaatccact atagttattg gagataccaa
    23761 atcctagcgc ctgcatatct gctattaatc gttgaaaagc tgctaaggct tcaggatttt
    23821 cgcccggtgc ataatcagct gcaagcggat gctttttatt tgcgataatc acttcgccat
    23881 attttccttg tacactataa taggaaccgt taaaatttac ctgagtctct gtacttgtta
    23941 cttcctgatc cgtttccgcc gatgtagagc tgcttgttga ctgctccgaa gttgttgaag
    24001 cagactgact tgaagtagtc gagacaactg ttgacgaatt tttggtagta ttggcctgat
    24061 ccggcttttg atgacatgct gctagtaaca gtattgtcgg taagcatatt agaatagtac
    24121 gtttcattat catcaccccg ttctcttata attatgtcta ttgtagcaca atcataagac
    24181 cccgtctaat aacgacttat gattttaact actattgata tttttaatgt tcattgaatt
    24241 tctctcgatt cttttccttt aaaatagtag catccctgat aacatacatg tcataaatag
    24301 aaa
//
LOCUS       DBNFCX010000026        23778 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.026, whole genome shotgun sequence.
ACCESSION   DBNFCX010000026 DBNFCX010000000
VERSION     DBNFCX010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 23778)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23778)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23778
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.026"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..917
                     /locus_tag="AC1PJC_000915"
     CDS             <1..917
                     /locus_tag="AC1PJC_000915"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HIP6619913.1"
                     /translation="SRRARRSRTQKKQLVPMLLGIALLVVTLLSIFLIFLKQPSKQQS
                     DSKASTVETTTRSSVMTSESSEVQTEIIWEQQTEPIKLPILMYHAIHVMAPEEEANAN
                     LIVDPTTFESHLKALQDAGYYTLSPEEAYKVLTENVLPAGKKVVWLTFDDSLWDFYSY
                     AYPLLKQYQMKATNNVITGFTEYGQAGHLTLDQIKEMQTAGLSFQGHTVNHPDLEYSS
                     IEDQTNELTSSKAYLDSQLNQETIAIAYPGGRYSADTVALTEQAGYKLGVTTNNGLAS
                     ASDGLLTLNRVRILPTTTAEGLLSEISY"
     gene            complement(974..2743)
                     /locus_tag="AC1PJC_000916"
     CDS             complement(974..2743)
                     /locus_tag="AC1PJC_000916"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6619914.1"
                     /translation="MKNRSVFTRVWDYLRRYQSSVFLAVFLKTISAVMNALEPFVLGL
                     IITELTKNLLDIANGVEGAQINYSYIAIMLAIYALRALLYEIGAYGSNYFMTKAVQGA
                     TKELRQDLSHKINKIPVSYFDKHQYGDLLGRFTSDVETVSNALQQSFLQLVNAVLTLS
                     LAIFMCFWLDVSLALVVVTLVPVTYFGSKFVMGKSQPYFKQQADALGRLNGFVQENLT
                     GFNVLKLYGREEISTEEFRQITADLQEVGFKASFMSGLLMPLVHGFSNIAYVVVALLS
                     GLKVLAGTLTVGNMQAFVQYVWQISQPVQTLTQLAPQLQSAKSSLERIFSVLDELDEE
                     DANALELTESLTGQVSFENVEFGYSEDKPLIRNFNLDVQPGEMVAIVGPTGAGKTTLI
                     NLLMRFYDVTSGAIKVDGQDIRNLSRQSYRSQFGMVLQDAWLYEGTIKENLRFGRLDA
                     TDEEIVEAAKAANVDHFIRTLPGGYNMEMNQESSNISQGQKQLLTIARALLADPAILI
                     LDEATSSVDTRLELLIQKAMKRLMKGRTSFVIAHRLSTIQEADKILVLKDGQIIEQGN
                     HESLLADKGFYYNLYQSQFSESK"
     gene            complement(2752..4488)
                     /locus_tag="AC1PJC_000917"
     CDS             complement(2752..4488)
                     /locus_tag="AC1PJC_000917"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002286381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6619915.1"
                     /translation="MNLIWTYLKKYPKWIALDLLGALLFVVVNLGLPTFLARMIDQGI
                     TKNDVSQLYFWAGMMGLIVLLGIVGRVTLAYAAGKLTTNIVKDIRNDLYEKIQDYSHH
                     EYEQIGVSSLVARMTNDAFVLMQFSEMVLKLGIITPLMMIASVIMTLVTSPSLAWTVA
                     VAMPFLVFVIFYVATKTRPLSEKQQKRLDTINQYVRENLMGLRVIRAFTREEFQETRF
                     AEVNEEYTDISKKLFNLTGLTEPLFVQIIIAMIVAIVWFALAPLQTGSLQIGDLVAFI
                     EYSFHALFSFLLFANLFNMYPRMSVSSQRIQEVLDMPISISKNEEGITETDTRGYLEF
                     ENVTFAYPGETESPVLHNISFKAKPGETIAFIGSTGSGKSSLVNLIPRFYDVTLGRIL
                     VDGVDVRRYNLKALRSKIGFIPQKALLFTGTIAENLKYGKMDASLAELHDATDVAQAK
                     EFIESKEEKFDTHLAEGGSNLSGGQKQRLSIARAIVKQPDIYIFDDSFSALDYKTDAI
                     LRSRLKEVTENATVLIVAQRVGTIMDADQIIVLNEGEIVGRGTHNELMESNEIYREIA
                     NSQLNRQSLTEE"
     gene            complement(4564..4806)
                     /locus_tag="AC1PJC_000918"
     CDS             complement(4564..4806)
                     /locus_tag="AC1PJC_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000379626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HIP6619916.1"
                     /translation="MDMIENLIIAIVKPLISQPDSLTIKIVDTPEFLEYHLDLDQSDI
                     GRIIGRKGRTISAIRTIVYSVPTSDKKVRLVIDEKE"
     gene            complement(4828..5100)
                     /gene="rpsP"
                     /locus_tag="AC1PJC_000919"
     CDS             complement(4828..5100)
                     /gene="rpsP"
                     /locus_tag="AC1PJC_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002884675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HIP6619917.1"
                     /translation="MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLL
                     AENSVTLKEERVLEWLAKGAQPSDTVRSLLSNAGVLKKFHEQKFSK"
     gene            complement(5225..5533)
                     /locus_tag="AC1PJC_000920"
     CDS             complement(5225..5533)
                     /locus_tag="AC1PJC_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4298 domain-containing protein"
                     /protein_id="HIP6619918.1"
                     /translation="MNNIMEARKRVEEMEKIFNRQLELNQSLSDSMAQLNQEQSTYLQ
                     LLDYYQSQTYMEDLDLSNKGYFNGIPCGVLSEDGVYNLLFDRTNLASQLRELADMLDQ
                     "
     gene            complement(5533..6180)
                     /gene="pcp"
                     /locus_tag="AC1PJC_000921"
     CDS             complement(5533..6180)
                     /gene="pcp"
                     /locus_tag="AC1PJC_000921"
                     /EC_number="3.4.19.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016398107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0008234 - cysteine-type peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016920 - pyroglutamyl-peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyroglutamyl-peptidase I"
                     /protein_id="HIP6619919.1"
                     /translation="MKIIVTGFDPFGGEPINPALETIKSLPKTIAGAEIILVEIPTVF
                     DKAADVLEEKMAEHLPDAVLCIGQAGGRVDLTPERIAINQDDARIPDNEGQQPIDRTI
                     REDGQPAYFSTLPIKAMVEAIHRIGLPASVSNTAGTFVCNHLMYQALYLAEKQFPKTK
                     AGFLHIPFLPEQVVDKPGLASMSLNDIVRGVEVAIGAIVEYRDKEDIKKGGGSTH"
     gene            complement(6177..6932)
                     /locus_tag="AC1PJC_000922"
     CDS             complement(6177..6932)
                     /locus_tag="AC1PJC_000922"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008990 - rRNA
                     (guanine-N2-)-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HIP6619920.1"
                     /translation="MIVTTSLGMDEGLVYRARLIASELGIEYKERKKQSVGKMLGTYE
                     AVLVLYKDKLILEQRGGQVLFFHPDTAMLRIKSGRDPLLELLGKEKQSIIDCTMGLGS
                     DSIVLASAGHRVTALESSKLVHFIVSRGLQDFDSGLQEVNRAMKSIQTIWTDSLTYLK
                     GQIDKSVDVIYFDPMFSEEIKESQNLSGLSTLADRSRLTEEIVSEAKRVARKKLIIKA
                     HFRDQVFEKFGFKRHVRPNQKFHYGEIILEEEV"
     gene            complement(6996..10175)
                     /gene="carB"
                     /locus_tag="AC1PJC_000923"
     CDS             complement(6996..10175)
                     /gene="carB"
                     /locus_tag="AC1PJC_000923"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019803305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HIP6619921.1"
                     /translation="MPKRTDIKKIMVIGSGPIIIGQAAEFDYAGTQACLALKEEGYSV
                     VLVNSNPATIMTDKEIADKVYIEPITLEFVTRILRKERPDALLPTLGGQTGLNMAMEL
                     SKAGILDELGVELLGTKLSAIDQAEDRDLFKQLMEDLNQPIPESTIVTTVDEALEFAA
                     EIGYPVIVRPAFTLGGTGGGMCANEEELREIAENGLKLSPVTQCLIERSIAGFKEIEY
                     EVMRDAADNALVVCNMENFDPVGIHTGDSIVFAPTQTLSDIENQMLRDASLSIIRALK
                     IEGGCNVQLALDPHSFKYYVIEVNPRVSRSSALASKATGYPIAKLAAKIAVGLTLDEM
                     VNPVTGTTYAMFEPALDYVVAKIPRFPFDKFEKGERRLGTQMKATGEVMAIGRNIEES
                     LLKACRSLEIGVYHNEMPELSQVTDDQLVEKIVKAQDDRLFYLSEALRRGYTVEELAQ
                     LTKIDLFFLDKLLHILEIEQELAINHDNIDLLKKAKKYGFADRKIAELWGRTEAYIRQ
                     LRTENKVVPIYKMVDTCAAEFESTTPYFYSTYEWENESIRSEKESVLVLGSGPIRIGQ
                     GVEFDYATVHSVKAIQAAGYEAIIMNSNPETVSTDFSVSDKLYFEPLTLEDVLNVIDL
                     EKPKGVIVQFGGQTAINLAEPLAKAGIPILGTQVADLDRAEDRDLFEKALKDLGIPQP
                     PGQTATNEEEALEAARKIGFPVLVRPSYVLGGRAMEIVENEADLRSYMRTAVKASPEH
                     PVLVDSYIVGRECEVDAISDGKDVLIPGIMEHIERAGVHSGDSMAVYPPQTLSKEVQA
                     TIADYTKRLAIGLNCIGMMNIQFVIKDETVYVIEVNPRASRTVPFLSKVTDIPMAQVA
                     TKLILGQSLAELGYQGGLYPESNQVHVKAPVFSFTKLAKVDSLLGPEMKSTGEIMGSD
                     LTLEKALYKAFEASYQHLAEFGNVVFTIADEDKEEVLGLAQRFYELGYGLLATAGTAA
                     FLTENGLAATTVGKLGDDSCPDIPSLVRAGKVQAIINTVGKKRVADGDGQVIRSSAIE
                     GGIPLFTALDTAEAMVKVLESRSFMTQAI"
     gene            complement(10685..11764)
                     /locus_tag="AC1PJC_000924"
     CDS             complement(10685..11764)
                     /locus_tag="AC1PJC_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl phosphate synthase small subunit"
                     /protein_id="HIP6619922.1"
                     /translation="MSKRRLILEDGTIFEGEAFGADIDVTGELVFSTGMTGYQESITD
                     QSYNGQILTFTYPLVGNYGINRDDFESIKPTCKGVVVSEWARRASNWRNQMTLDEFLK
                     AKKIPAISGIDTRALTKIIRQHGTMKATLANVGDSVEHLTDQLRATVLPTNNIQQVST
                     KTAYPAPGVGRSVVLVDFGLKHSILRELAKRDCNVTVVPYDTTAEEVLALHPDGVMLS
                     NGPGNPDDVPEALEMIRGILGKIPIFGICMGHQLFAKANGATTYKMKFGHRGFNHAVR
                     EIATGRVDFTSQNHGYAVAREDLPECLMITHEEINDKSVEGVRHKYYPGFSVQFHPDA
                     APGPHDASYLFDEFMELMDSFKKGQ"
     gene            complement(12168..13091)
                     /locus_tag="AC1PJC_000925"
     CDS             complement(12168..13091)
                     /locus_tag="AC1PJC_000925"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002889464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HIP6619923.1"
                     /translation="MTITNGKVSLKHLVTMETLSNEEVLGLIQRGIAFKRGEKVELDR
                     KYYASNLFFEDSTRTHKSFEMAELRLDMGMIDFDARTSSVNKGETLYDTILTMSALEV
                     DICVIRHSEVDYYKQLIDSPTIQTSIVNGGDGSGQHPSQSLLDLMTIYEEFGTFEGLK
                     IAIAGDITHSRVAKSNMQILKRLGAEIFFAGPEEWYAEEFDVYGQHLNIDDIVETVDV
                     LMLLRVQHERHDGDGGFSKETYNRLHGLTEERYKRLKDSAIVMHPAPVNRDVEIDDQL
                     VEAPKSRIVRQMQNGVFVRMAILEAIVNGKA"
     gene            complement(13147..13668)
                     /gene="pyrR"
                     /locus_tag="AC1PJC_000926"
     CDS             complement(13147..13668)
                     /gene="pyrR"
                     /locus_tag="AC1PJC_000926"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HIP6619924.1"
                     /translation="MKTKEIVDDMTMKRAITRITYEIIERNKNLDNIVLAGIKTRGVF
                     IAKRIQERLKQLEGIDVPLGELDTKPFRDDMKVEDDTTNMTANVNDRDVILVDDVLYT
                     GRTIRAAIDNIVSLGRPARVSLAVLVDRGHRELPIRADYVGKNIPTSRSEEIIVHMAE
                     IDGQDAVLLVEGA"
     gene            complement(13867..14514)
                     /locus_tag="AC1PJC_000927"
     CDS             complement(13867..14514)
                     /locus_tag="AC1PJC_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Pr6Pr family membrane protein"
                     /protein_id="HIP6619925.1"
                     /translation="MKHQSILFYSRCLLAILAITGTALEIIKYGIGMLMYYTVQSNLL
                     VSLFAVYMVYAMSKNVDLQTSRFLRIKAAVTMSIMITCVVYHFMLAPLADDFWRLENL
                     LCHYIVPLYFLLDTLIVDRQQQYKWFDPIWWTLLPVLYMIFGLVNGLFIKIPIPDAKD
                     SPFAYFFLNVPKYGWTYVLTYAGVIFVAYLVCGFLLAGLKSINLKTSLSFGKNSQ"
     gene            complement(14562..14900)
                     /locus_tag="AC1PJC_000928"
     CDS             complement(14562..14900)
                     /locus_tag="AC1PJC_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002920966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein YjdM"
                     /protein_id="HIP6619926.1"
                     /translation="METLPNCPKCNSEYVYEDGALLVCPECAYEWNPADVAEEESGPI
                     AIDANGNRLADGDTVTLIKDLKVKGAPKDLKQGTRVKGIRIVEGDHNIDCKIDGFGAM
                     KLKSEFVKKI"
     gene            complement(14981..15874)
                     /locus_tag="AC1PJC_000929"
     CDS             complement(14981..15874)
                     /locus_tag="AC1PJC_000929"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HIP6619927.1"
                     /translation="MEVRVEVGGIRLDKALSDLTDLSRSVANEQIKAGQVLVNGQPKK
                     AKYSVQVGDVLTYQIPEVEEIDYVAEDIPLEIVFQDEDVAVVNKPQGMVVHPSAGHMS
                     GTLVNALLYHVKDLSGINGVLRPGIVHRIDKDTSGLLMIAKNDDAHTKLAAELKDKKS
                     LRKYWAIVHGNLPNDRGVIEAPIGRSEKDRKKQAVTAKGKEAVTRFQVLERFGDYTLV
                     ELTLETGRTHQIRVHMAYIGHPVAGDEAYGPRKTLKGHGQFLHARTLGFTHPRTGEVV
                     EFTAEAPAIFQEALEKLRKAE"
     gene            complement(15858..16322)
                     /gene="lspA"
                     /locus_tag="AC1PJC_000930"
     CDS             complement(15858..16322)
                     /gene="lspA"
                     /locus_tag="AC1PJC_000930"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HIP6619928.1"
                     /translation="MRKIGFPFLMVVLIGLDQLVKAWTVANVELDTVTEFIPGLMSLA
                     YLRNYGAAWSILQNQQWFFTIMTIVAVTGLVWYYIKQIKGNIWTLFSLSLMIAGALGN
                     FIDRLRLGYVVDMFHLDFISFPVFNVADVCLTVGVGILFICIMKEESNGSKS"
     gene            complement(16315..17229)
                     /locus_tag="AC1PJC_000931"
     CDS             complement(16315..17229)
                     /locus_tag="AC1PJC_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HIP6619929.1"
                     /translation="MNIQQLRYVVAIANSGTFREAAEKMYVSQPSLSISIRDLEKELG
                     FQIFSRTSSGTFLTQKGMEFYEKAQALVKGFDQFEHLYLQPEEGEKTFSISSQHYDFL
                     PPLITEFSRSHPQYPHFRIFESTTVQILDEVAQGYSELGIIYLNERNTKGIMQKLDKL
                     HLQAVDLSAFQTHIYLREDHPLTKKAEIEPADLVGLPTVRFTQEKEAYLYYSENLIDT
                     SDSSVVFDVTDRATLNGILERTDAYATGSGYLDDESVNGITVIPLKGKVDNRMVYVKR
                     ANDELSSCAKDFIETMQAYFDKKKDENA"
     gene            complement(17312..17470)
                     /locus_tag="AC1PJC_000932"
     CDS             complement(17312..17470)
                     /locus_tag="AC1PJC_000932"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIP6619930.1"
                     /translation="MFRGSGMGSNLVKLVIDDLANRNSKAFQIAVEEENLGTWKLYKK
                     LVLKNRTG"
     gene            complement(17663..17956)
                     /gene="rpmA"
                     /locus_tag="AC1PJC_000933"
     CDS             complement(17663..17956)
                     /gene="rpmA"
                     /locus_tag="AC1PJC_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018376869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HIP6619931.1"
                     /translation="MLNLNLANLQFMAHKKGGGSTSNGRDSQAKRLGAKAADGQTVSG
                     GSILYRQRGTKIYPGANVGRGGDDTLYAKVEGVVRFERKGRDKKQVSVYPIAK"
     gene            complement(18003..18317)
                     /gene="rplU"
                     /locus_tag="AC1PJC_000934"
     CDS             complement(18003..18317)
                     /gene="rplU"
                     /locus_tag="AC1PJC_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HIP6619932.1"
                     /translation="MSTYAIIKTGGKQVKVEVGQAIYVEKLNVEAGQEVTFEEVVLVG
                     GEKTVVGTPLVAGATVVGTVEKQGKQKKVVTFKYKPKKGSHRKQGHRQPYTKVVINAI
                     NA"
     gene            complement(18597..19925)
                     /gene="brnQ"
                     /locus_tag="AC1PJC_000935"
     CDS             complement(18597..19925)
                     /gene="brnQ"
                     /locus_tag="AC1PJC_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009660447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transport system II
                     carrier protein"
                     /protein_id="HIP6619933.1"
                     /translation="MMKKGALTGLLLFGMFFGAGNLIFPPALGVLSGENFWPAILGFV
                     VSGVGIAVVALIVGTLNPKGYVHEISRKISPTFATIYLVALYLAIGPFFAIPRTATTS
                     FEIGIAPLLGDANLDLWLFGFTALYFVAAYLIALNPSQILNSIGRILTPVFAILIVIL
                     VVLGIVKYGSTSPLPASEAYSAEQAFGTGFIEGYNTLDALASIAFSVIAVNTLKQLGF
                     SSKKEYVSTIWSVGLVVALAFSALYVGLAFLGNHFPVPADVLASDTNKGVYILSQATQ
                     AIFGPGAQIFLAAMVIVTCFTTTAGLIVSSGEFFAERFPRFSYKVYATIFTLIGFGIA
                     NLGLNNIITFSVPVLLVLYPITICIVLITIVNKFVPLSTYGMQLTVGVVTALSLVEVL
                     AGQFNWTAISTIISALPLAGQSLAWLLPALVGIVLSLFLPNKQESEVFEM"
     gene            complement(20043..20195)
                     /locus_tag="AC1PJC_000936"
                     /pseudo
     CDS             complement(20043..20195)
                     /locus_tag="AC1PJC_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922307.1"
                     /note="Required for the synthesis of the thiazole moiety;
                     incomplete; partial in the middle of a contig; missing
                     N-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uracil 4-sulfurtransferase ThiI"
     gene            complement(20197..20781)
                     /locus_tag="AC1PJC_000937"
     CDS             complement(20197..20781)
                     /locus_tag="AC1PJC_000937"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619934.1"
                     /translation="MDIISDIFHAIGDTFILRSHFVNISYGEPPTVGFLIGIIIKHAF
                     APVFILFFLLPKRRGELLAIIKKVKQVFQELRFDVMMYVILFICILLGFVAVYDIKRT
                     FSAYAYFFQHPVVESKQGVLSHFYIKKGGSRASHADIYCYLTIDNEHIPVYFSDGNKR
                     IANAILKDGKDYYQVRVGLDNNGKAVSVNEFINN"
     gene            complement(20815..21417)
                     /locus_tag="AC1PJC_000938"
     CDS             complement(20815..21417)
                     /locus_tag="AC1PJC_000938"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619935.1"
                     /translation="MYDFLDGLLHALSWDSEKTNVILGNHLSWPYTLGIVINFLVCLS
                     VFVLVVRSLVKNTKKSGGWRNYWSHYYQNRISIVGRTLFWLTVPLTLLFIVCITVYFL
                     GFRVVNGLTRYHYFTSQELSPTYALVTIKDTNIGNYRSQYSKLVLQVHIAGASQTVNV
                     SNSSKTIARYFRSLEGNIYPALVEVNSNNEIVYISNILID"
     gene            complement(21419..22636)
                     /gene="thiI"
                     /locus_tag="AC1PJC_000939"
     CDS             complement(21419..22636)
                     /gene="thiI"
                     /locus_tag="AC1PJC_000939"
                     /EC_number="2.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140741 - tRNA-uracil-4 sulfurtransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uracil 4-sulfurtransferase ThiI"
                     /protein_id="HIP6619936.1"
                     /translation="MNYSEIMIRYGELSTKGKNKMRFVNKLRNNIKHVLSVYPEVTVY
                     FDRDRGHVYLNGADYQEVSASLKKIFGIQNFAPSYKIEKSVPALKEAVVEIMQTIYKE
                     GMTFKIAARRSDHSFELDSRDLNQVLGDAVFTAIPNVQVQMKSPDITLRVEIRPDAAY
                     ISHEEIKGAGGLPVGTSGKGTLMLSGGIDSPVAGYLALKRGVEIEALHFASPPYTSPG
                     ALKKAHDLTRKLTAFGGNITFIEVPFTEIQEEIKEKAPEAYLMTLTRRFMMRITDRVR
                     EERGAMVIINGESLGQVASQTLESMQAINAVTNTPVIRPVVTMDKLEIIDIAQEIDTF
                     DISIQPFEDCCTIFAPDRPKTNPKIKNVEQYEARMDVEGLVERAVAGIIVTEITPKEE
                     VKDEVDSLIEELL"
     gene            complement(22638..23777)
                     /locus_tag="AC1PJC_000940"
     CDS             complement(22638..23777)
                     /locus_tag="AC1PJC_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018543459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase family protein"
                     /protein_id="HIP6619937.1"
                     /translation="MYFDNAATTQVYPEVLKTYTEVATKIWGNPSSLHSLGSQATRIL
                     EASRKQIAELLGQDSKEIFFTSGGTEGDNWVIKGVAFEKAHLGKHIIVSAIEHPAVKE
                     SALWLKTQGFEVDLAPVNAQGFVDVSALESLIRPDTTLVSIMAVNNEIGAIQPIQEIS
                     QLLADKPTISFHVDAVQAIGKVPTERYLTDRVDFASFSGHKFHSVRGVGFVYVKSGKK
                     IAPLLTGGGQESDKRSTTENVAGIAATAKALRLTLDKATDSQKRLAAMKQILVDELGK
                     YADVTVFSGLEDFVPSIVTFGIKNIRGEVIVHAFEDHQIYISTTSACSSKAGKPAGTL
                     IAMGVPQKLAQTAVRISLDDDNDMGQIEQFLTIFKQIYQNTQKVR"
BASE COUNT         7139 a         5515 c         4437 g         6687 t
ORIGIN      
        1 attcaagaag agctcgtcga agtcgcacac aaaagaaaca acttgtgcca atgctactcg
       61 gtatcgcatt attagtagtg actctactat ctatttttct aatctttcta aaacagccat
      121 ctaagcagca aagtgattcc aaagcttcaa cggtagagac cacaacccgt tcgagtgtta
      181 tgacttcaga aagtagtgaa gtacaaacag aaatcatttg ggaacaacaa actgaaccta
      241 tcaaacttcc aatcctcatg tatcatgcca ttcacgtaat ggctcctgag gaagaagcta
      301 atgcgaatct tatcgtagat ccaacaactt tcgaaagtca tctaaaagca ttgcaagatg
      361 caggttacta tactttatca cctgaagagg cttataaggt attgacagaa aatgtccttc
      421 ctgctggcaa aaaggttgtc tggctaacct ttgacgatag cctctgggat ttttatagtt
      481 atgcctaccc attgcttaag caatatcaaa tgaaggcaac caacaatgtc attacagggt
      541 ttactgaata tggacaagca gggcacctta ctcttgatca aatcaaggaa atgcagactg
      601 caggcctctc cttccaaggg cataccgtca accatcctga tttagagtat agttctatcg
      661 aggatcaaac aaatgaactt acttcctcta aagcctatct tgacagccaa ttaaatcagg
      721 aaaccatcgc tatcgcctac cctggtggac gatactcagc agatacagta gccttaactg
      781 aacaagctgg ctacaaactt ggtgtgacta ctaacaacgg cttagcttct gctagtgacg
      841 gattactgac tctcaatcgt gtccgcatcc tcccaaccac taccgccgag ggactattat
      901 ccgaaatttc ctattaattt tcacaaacat gtatatgaga aaactccctg tcactgacaa
      961 gggagttcgt tttttatttg gattcactaa actgactttg atacagatta taatagaaac
     1021 ctttatctgc caaaagactt tcatggttac cttgttcgat aatctgtcca tctttcaaga
     1081 ccaaaatctt atcagcttcc tgaatggtag ataagcgatg agcgatgacg aaacttgtcc
     1141 gccctttcat caaccgtttc atagcctttt gaatcaagag ttccaaacgg gtatcaactg
     1201 aagaagtcgc ttcgtcaaga atcagaatag caggatctgc caacaaggca cgtgcaatag
     1261 tcaaaagctg tttctgacct tgggaaatat tgctggattc ctggttcatt tccatattat
     1321 aaccgccagg cagggtacgg ataaagtggt caacgttggc agctttagca gcctccacaa
     1381 tttcctcatc cgtcgcatcc agacgtccaa aacgcaggtt ttccttgatg gtcccttcat
     1441 agagccaagc atcctgcaag accatgccaa attgactacg gtaggattga cgagaaagat
     1501 ttcgaatatc ctgcccatct accttgatag cacctgatgt gacatcgtag aaacgcatga
     1561 gcaagttgat aagagtagtc ttacctgccc ccgttggtcc aacgatagcc accatctcac
     1621 cgggttgaac atccagatta aagttacgga tgagcggctt gtcttctgaa taaccaaatt
     1681 cgacattttc gaagctaact tgtccagtca gactttctgt caactcaagc gcattggcgt
     1741 cttcttcgtc aagctcatct aagactgaaa agatgcgttc aagggaagat ttggcagact
     1801 gcaactgtgg tgccaattgg gtcaaggttt ggactggctg agaaatctgc cagacgtatt
     1861 ggacgaaggc ctgcatatta cccaccgtca atgtacctgc aagaactttc aatccagata
     1921 gcagggcgac gacaacgtag gcgatgtttg agaagccgtg aactagaggc atgagcaaac
     1981 cagacatgaa actagccttg aaaccgactt cctgcaaatc tgcggtaatc tggcgaaact
     2041 cttctgtaga aatttcttca cggccgtaga gtttgagaac gttaaaacca gttagatttt
     2101 cttggacaaa gccgttcaaa cgacctaggg catcagcctg ttgcttgaaa tatggttggg
     2161 atttgcccat gacaaactta gaaccaaaat aggtcactgg aaccaaggtt acgactacaa
     2221 gtgctaggga tacatccaac cagaaacaca tgaaaatggc tagagagagg gtcagaacgg
     2281 cattgactag ctggagaaaa ctttgttgta gggcgttcga cacagtctcc acatcgcttg
     2341 taaaacgtcc gagtaaatca ccatactggt gcttgtcaaa ataagatact ggaatcttgt
     2401 taattttgtg gctcaagtcc tgacgtagtt ccttagttgc tccctgcact gccttggtca
     2461 taaaatagtt agaaccgtag gcaccgattt catatagaag ggcacgaagg gcatagatgg
     2521 caagcatgat ggcaatgtag gaatagttaa tctgcgctcc ttctactcca ttagcaatat
     2581 ccaacagatt cttggtcaat tctgtaatga taagccccag tacaaagggt tctaaggcat
     2641 tcataactgc actgatggtc tttagaaaaa cggctaaaaa tacagaagat tggtaacgac
     2701 gtaaatagtc ccaaacacgg gtaaatactg atctattctt cataattcct cctattcttc
     2761 tgttaacgat tgacggttaa gctgagaatt ggcgatttct cgataaatct cattgctttc
     2821 catcaattca ttgtgggtac cgcggccaac gatttcacct tcgttcagca cgataatctg
     2881 gtcagcatcc ataatggttc cgacacgttg agccacaatt agcaccgtcg cattttccgt
     2941 cacttccttc aaacgactcc gcaaaattgc atccgtctta taatccaagg ctgagaaaga
     3001 atcatcaaaa atgtaaatat ccggttgctt cacaatagca cgtgcaatag acaaacgttg
     3061 cttttgcccg cctgacaggt tgcttccacc ttctgctaga tgggtgtcga atttttcttc
     3121 cttactctcg ataaactcct tagcctgagc cacatccgtc gcatcatgaa gttctgcaag
     3181 actagcatcc atcttaccgt actttaagtt ttccgcgata gttccggtaa atagcagagc
     3241 tttctgcgga ataaagccaa tcttgctgcg gagtgccttt agattgtagc gtctgacatc
     3301 cacaccgtcc accaagatac gaccaagtgt cacatcatag aaacgtggaa tcaagttgac
     3361 caaggaagac ttaccagaac ctgttgaacc aataaaggca atggtttcac caggcttagc
     3421 tttgaaggaa atattgtgca gcacaggcga ttccgtttca ccaggatagg caaaagttac
     3481 attttcaaat tccaaataac cacgagtatc tgtttcagta ataccttctt cattcttaga
     3541 aatggaaatg ggcatgtcca agacttcctg aattcgttgg ctcgataccg acatacgtgg
     3601 atacatgtta aacaagttag caaagagcaa gaaagagaaa agcgcgtgga aactatattc
     3661 gataaaggct accaaatcac cgatttgcag actgcctgtt tgcaaaggag ccagtgcgaa
     3721 ccagacaatg gccacaatca tagcaatgat aatctggacg aagagcggct ctgtcaatcc
     3781 agtcagatta aagagttttt tggaaatatc ggtatattcc tcattgacct ctgcaaaacg
     3841 agtttcttgg aactcttcac gtgtaaaggc acgaatgacc cgcaaaccca tgagattttc
     3901 acgaacatac tggttgatag tatccaatcg tttctgttgt ttttcagaaa gaggacgagt
     3961 tttggttgcc acatagaaaa taacaaaaac tagaaaaggc atggctactg ctactgtcca
     4021 ggccaagctc ggactggtta ccaaggtcat gatgacagaa gcaatcatca tcaagggtgt
     4081 aataatacct agtttcaaga ccatttcaga gaattgcatg agaacaaaag catcatttgt
     4141 catacgagca actagagaag aaacaccaat ctgctcatat tcatgatgag aatagtcctg
     4201 aattttctca tacagatcat ttcgaatatc tttgacgatg ttggtagtca actttccagc
     4261 tgcataggca agtgtcactc gaccaacaat cccgagcagg acaatcaatc ccatcatccc
     4321 cgcccagaaa tagagctgac taacatcgtt ctttgtaatt ccttggtcaa tcatcctagc
     4381 caaaaaagtt ggcaagccca agtttaccac tacaaacaat aaggccccca acaagtctaa
     4441 ggcaatccac ttaggatatt ttttcaaata ggtccaaatc agattcatca tttcttcctt
     4501 tctatatgtt aaaaaggggc taggcccctt tgtcaacgtt aaaagccacc aaacggtgac
     4561 tttctattct ttctcgtcga tcactaaacg aactttttta tcacttgttg gaacagaata
     4621 gacaatcgtt ctgattgcag aaattgtgcg tccttttcta ccaatgatac gtccaatatc
     4681 agattgatcc aaatccaaat gatattccaa gaattcaggt gtatcaacaa tttttattgt
     4741 caagctatca ggctgtgaaa tcaaaggttt cacaatcgca ataatgagat tttcaatcat
     4801 gtccataagt gttctcgctt actgttctta cttagagaat ttttgttcgt ggaatttctt
     4861 caatacgcca gcgtttgaaa gaaggctacg aactgtatca gatggttgtg caccttttgc
     4921 caaccactca agtacacgct cttctttaag agttactgag ttttcagcca aaagtgggtt
     4981 gtaagtacca acagtttcga tgaaacgacc atcacgtggt gcacgtgagt ctgcaacgtt
     5041 gatacggtag aaaggtttct ttttagaacc catacgagtc aaacggattt ttactgccat
     5101 ttttaaatgt tctcttttct ttgtattttt attcggtgaa atagcagagc tatttagcac
     5161 atgttctatt ataccacact ttaacagggt gtcaagaaaa aaacttgaca ggttttaaaa
     5221 aattttattg atcgagcata tctgctagtt ctctcagttg acttgctaga tttgtacggt
     5281 caaacagtaa attatagact ccatcttcac tcaatactcc gcaaggaata ccattgaaat
     5341 aacccttatt agataaatca agatcttcca tataggtctg gctctggtaa taatctaata
     5401 actgtaaata agtcgattgt tcctggttaa gttgtgccat actatcggaa agggactggt
     5461 tcagctctag ctgtctgtta aatatttttt ccatttcctc tacacgtttt cttgcttcca
     5521 taatattgtt catcagtgtg tactgccacc acccttttta atatcctctt tatccctata
     5581 ttcaacaatc gctcctatag ctacttcaac tcctcttaca atatcgttca aagacatgga
     5641 agctagtcct ggtttgtcta caacctgctc tggtaagaag ggaatatgga gaaagcctgc
     5701 cttagtcttt ggaaattgtt tctccgccaa gtaaagagct tgatacatga gatggttgca
     5761 gacaaaggtc ccagcagtat tagaaacaga agctggaagc ccaatcctat gaatcgcttc
     5821 aaccattgct ttgatgggta aggtggagaa ataagcaggc tgaccatctt ctcgaatcgt
     5881 tctatcaatc ggctgttgcc cttcattgtc tggaatacgt gcatcatctt ggttaatggc
     5941 tatacgctca ggagttaaat caactcgacc accagcctga ccaatacata gtaccgcatc
     6001 aggtaaatgt tctgccattt tctcctctaa aacatccgca gccttgtcaa aaacagtcgg
     6061 aatctctaca agaataatct ctgcaccagc aatggtctta ggtagagatt tgattgtttc
     6121 caaggctggg ttaataggct cgccaccaaa gggatcaaag cctgttacga tgattttcat
     6181 acttcctcct ccaaaataat ttctccgtag tgaaattttt gattgggtct gacatgacgt
     6241 ttaaagccaa atttttcaaa gacctgatct cgaaaatgag cctttattat caatttcttc
     6301 ctagctactc gtttagcctc agatacaatt tcctccgtta aacgacttct gtcagctaaa
     6361 gtagacaagc cagaaagatt ttgtgattcc ttgatttctt ctgaaaacat gggatcaaag
     6421 taaatgacat caacagactt atctatttgc cctttcaaat aagtcaaact atctgtccaa
     6481 attgtctgga tagatttcat ggctcgattg acctcttgca gcccactatc aaaatcctgt
     6541 aaacctcgac tcacaataaa gtgcactagc ttagaacttt ccaaggctgt cacccgatga
     6601 ccagcacttg ctaacacaat gctatcagat cccaagccca tagtacagtc tattattgat
     6661 tgtttttctt ttccaagtaa ttctaaaagc ggatctcttc cagacttaat ccgcaacatg
     6721 gcagtatctg ggtggaaaaa taaaacctgc ccacccctct gctctagtat caatttatcc
     6781 ttataaagaa ccaagacagc ctcgtaggta cctaacattt ttccaaccga ctgcttcttt
     6841 ctttccttgt attcaattcc caattcactg gcaatcagtc tagccctata gaccagcccc
     6901 tcatccatcc caagactagt tgttacaatc attttcatac tcttcagtat atcaaaaaat
     6961 caggacgaac tcaaagccca tcctgatagt atcttctata tagcctgtgt catgaagcta
     7021 cggctctcca gcactttgac catagcttct gctgtatcaa gggctgtaaa gagcggaatt
     7081 cctccttcaa tagcagagct tcgaatgact tgaccgtcac catctgccac ccgtttttta
     7141 ccaaccgtat tgataatcgc ctgaacctta cctgcccgaa caagactagg aatatctgga
     7201 caggaatcat cgcctaattt accaacagtt gttgcagcaa gtccattttc tgttagaaag
     7261 gcggctgttc ctgccgtagc cagtaggcca taaccaagtt catagaaacg ttgagccaga
     7321 ccaagcactt cttccttgtc ttcatccgca atggtaaaga caacgttgcc aaactcagcc
     7381 aggtgctgat aacttgcctc gaaagcctta taaagtgctt tttccagtgt caagtctgac
     7441 cccataatct caccggttga cttcatctct ggtcctaaca aactgtcaac tttagctagt
     7501 ttcgtgaacg agaagaccgg tgccttgacg tgcacttggt tgctctcagg ataaagaccg
     7561 ccttggtagc caagttccgc aaggctttgt cccaaaatca atttggttgc aacctgagcc
     7621 attggaatgt ctgtgacttt ggacaagaat ggtaccgtac gactagcacg aggattgacc
     7681 tcaataacat aaaccgtttc atccttgata acaaactgga tattcatcat accgatacag
     7741 ttgagaccga ttgccaagcg tttggtgtag tctgcaatgg tcgcctgcac ttctttggac
     7801 aaggtttgtg gcggataaac ggccatcgaa tcacctgagt gaaccccagc gcgctcgata
     7861 tgctccataa tacctggaat caagacatcc ttaccatctg aaatagcatc cacttcacac
     7921 tcacgaccga cgatataaga atccaccaaa actgggtgct ctggcgaagc cttgaccgca
     7981 gttctcatat aagaacgtaa atccgcttca ttttcgacaa tttccatagc acgaccgccc
     8041 aagacataag agggacgaac aagtaccggg aaaccaattt tgcgggccgc ttcaagagct
     8101 tcctcttcat tggttgcggt ttggcctggt ggctgtggaa tccctaggtc tttcagggct
     8161 ttttcaaata aatccctgtc ttcagctcta tccaaatccg ctacttgcgt acccaagatt
     8221 ggaatacctg ctttggccaa tggctctgcc aaattgatag ccgtctggcc accgaactga
     8281 acgataaccc cttttggttt ctcaaggtcg atcacattca agacatcttc caaggttaac
     8341 ggctcgaagt aaagcttgtc cgaaaccgaa aagtcagttg acacagtttc agggtttgag
     8401 ttcataatga tggcttcgta gccagccgcc tgaatggcct tgacagaatg caccgtcgca
     8461 tagtcaaact ccacaccctg accgatacga attggaccag aacccagcac caaaacagat
     8521 tctttctctg aacggataga ctcattttcc cactcataag ttgaatagaa ataaggtgta
     8581 gtactttcaa attcggctgc acaagtgtcc accatcttgt aaatagggac aactttgttc
     8641 tctgtccgca gttgacgaat ataggcttca gttctgcccc agagttctgc aatcttgcgg
     8701 tctgcaaaac cgtatttctt ggcttttttc aataaatcaa tattatcgtg attaattgcc
     8761 aattcctgct cgatttctaa gatatgaagc agcttatcaa ggaagaaaag atcaatcttg
     8821 gtcaattgag ccagttcttc tactgtatag ccacgtcgaa gggcttctga aagatagaat
     8881 aaacgatcat cctgtgcctt gacaatcttt tcaaccaatt ggtcatctgt cacttggctg
     8941 agttctggca tttcattgtg atagacaccg atttccaaag aacggcaggc cttgagcaga
     9001 ctttcttcga tattgcgacc aatagccatg acctctccag ttgccttcat ctgcgttcca
     9061 aggcggcgct cccctttttc aaacttatca aatgggaaac gtggaatttt tgccacaacg
     9121 tagtcaagag caggctcaaa catggcatag gttgttcctg taacagggtt caccatttca
     9181 tccaaggtca agccaaccgc aatttttgct gctaatttgg caataggata acctgtcgct
     9241 ttcgatgcca aggcagagga acgcgataca cgaggattga cttcaatgac ataatatttg
     9301 aaactatgtg gatcaagtgc caactgcaca ttacaaccac cttcgatttt gagggcgcga
     9361 ataatgctga gactggcatc acgcaacatc tggttttcaa tatccgaaag cgtctgcgtt
     9421 ggggcaaata cgatagaatc tcctgtatga attcccacag ggtcaaagtt ttccatgtta
     9481 catacgacca aggcattgtc agccgcatcc cgcatcactt cgtattcaat ttctttgaaa
     9541 ccagcaatcg aacgctcaat caaacactgg gtcaccggtg acagtttcag accattttct
     9601 gcaatttcac gcagttcttc ttcattggca cacataccac cgccagtacc acccaacgtg
     9661 aaggctggtc gaacaatgac aggatagcca atttcagcag caaattccaa agcctcatca
     9721 actgttgtca caatcgttga ctcaggaata ggctgattga ggtcttccat gagttgtttg
     9781 aagaggtcgc ggtcctctgc ctgatcaatt gcagacagtt tagttcccaa caactcaact
     9841 ccaagctcat ctaaaatacc agccttagac aattccatgg ccatgttgag accagtctga
     9901 ccacccagag ttggcaagag agcatctgga cgctccttcc gtaaaatccg tgtgacaaat
     9961 tcaagcgtaa tcggctcaat ataaaccttg tccgcaattt ccttgtctgt cataatggtc
    10021 gcagggtttg aattgaccaa gacaacacta tagccttctt ccttcaaagc caaacaagcc
    10081 tgagtcccag cataatcaaa ctccgcagcc tgaccgataa taatcggacc agacccaatt
    10141 accataattt tcttaatatc cgtacgtttt ggcataatgt atgatacaaa gcccgttaag
    10201 aggacaaagc gaaaatagga agcacgacgc taatgcttca agcatcaaga cgatgtttat
    10261 ctttttcgca cagcccttag ggcgtgttcg aataggaaac tcgaacctgt atctctcctt
    10321 tctattttct atctctccgg atagaattaa ataattgtcc gacgtgagaa aatggattcg
    10381 acattaatcc attttcgagc tagtgcaagg gatagcctga cctccataga ggcaggcgta
    10441 gggaaatgag ttgctcgcaa ccattgatct gtcccttgcc tttctattcg tcaactcaca
    10501 ggttgacatt aaataagata agtccgacgt ttagaatctc aattcgttaa taattgaaat
    10561 tctaaactag tgtcagattt agcaaaggtc ccattggact ttgcgtagga ggacacatgc
    10621 gttagcatga agtccgactt gctctgaccg acgcagtaaa gtttagctcg atagtagtta
    10681 aaccttactg ccctttttta aacgaatcca tcaattccat aaattcgtca aacaaatagc
    10741 tggcatcatg tggaccaggt gcagcatctg ggtggaattg aacagagaaa cctggatagt
    10801 acttgtggcg taccccttct actgatttgt cattgatttc ttcatgagta atcattaaac
    10861 attcaggtaa atcttcacga gcaacagcgt aaccgtggtt ctgactggta aaatccactc
    10921 gaccagtcgc aatttcacga acagcatggt taaaaccacg atgtccgaac ttcatcttgt
    10981 aagttgtagc accattggcc ttagcaaaga gttggtgccc catacagata ccaaaaattg
    11041 gaattttccc aagaatccca cgaatcattt ctagcgcttc tggaacatca tctggatttc
    11101 ctgggccgtt tgatagcata acaccatcag gatggagagc aagaacttct tcagcagtcg
    11161 tatcataagg gacaactgtc acattgcaat cacgcttggc taactctcta agaatagaat
    11221 gtttcaatcc aaaatcaacc aaaacaacac tacgtccaac tccaggtgca ggataggctg
    11281 tttttgtcga tacttgctgg atgttgttgg ttggcaaaac agtcgctctc aattgatccg
    11341 tcaaatgctc aacagaatca ccaacatttg ccaatgtcgc cttcatggtc ccgtgctgac
    11401 gaataatttt agttagggcg cgtgtgtcaa ttccagaaat tgctggaatt ttcttagctt
    11461 ttaaaaattc atctaaagtc atctggttac gccagttact tgctcgacga gcccactcgc
    11521 taacaaccac tcccttacaa gtcggtttga tcgactcgaa atcatcacgg ttaatcccgt
    11581 aatttcctac caagggatag gtaaaggtta aaatctgacc attataagac tggtccgtga
    11641 tggattcctg ataacctgtc atcccagttg agaaaaccaa ctcaccagtc acatcaatat
    11701 cagcaccgaa ggcctcccct tcaaaaatag tgccatcttc caaaattaaa cgtctttttg
    11761 acataataat aagatattaa gggcgttaag cggacacagt caaaatagga gtttgaccaa
    11821 gaacgcttgc gttcgaggaa aaactatctt tttgacccag tccgtagccc gaattcagtt
    11881 acaaatccga gcaacagaac accccttctc ctttctattt tctatctctc cggatagaat
    11941 taaataatag tccgacgccg taaggtttag ctcgatatta gttaaacctt acggctagtg
    12001 caaggaatag cctgacctcc atagaggcag gcgtagggaa atgagttgct cgtaaccatt
    12061 gacctgtccc ttgcctttct attcgtcgcc tctctgagcg acattaaata agataagtct
    12121 aacaaatttc taactgctca gttctaagat acctgaacag cttactttta agccttgcca
    12181 ttgacaattg cttccaaaat cgccatccgg acaaatacac cattctgcat ttgacggaca
    12241 atacgtgatt ttggcgcctc taccaattga tcatcaatct caacatcacg gttaacagga
    12301 gccggatgca tgacaatagc actatctttc aagcgtttgt agcgctcctc tgttaaacca
    12361 tgcaaacggt tataagtttc tttagaaaaa ccaccatcac catcatggcg ctcgtgttgt
    12421 acacggagca acatcagtac atctaccgtt tccacaatat catcaatatt caaatgctga
    12481 ccatagacat caaattcctc tgcgtaccat tcctccggtc cagcaaagaa aatctcagct
    12541 cccagacgtt tcaaaatttg catattggac ttagcaaccc gtgagtgtgt aatatcacct
    12601 gcaatggcaa tcttcaagcc ttcaaaagtt ccaaattctt cataaatagt catcaaatca
    12661 agtagggatt ggcttggatg ttgacctgaa ccatcaccac cattgacaat tgaagtctga
    12721 atggtaggac tatcgatcaa ttgcttgtaa taatccactt ccgagtgacg aatcacgcag
    12781 atgtctacct caagtgccga catggtcaaa atggtatcat acaaggtttc acccttattg
    12841 actgagctgg tacgagcatc aaagtcaatc attcccatat ccaaacgaag ctctgccatt
    12901 tcaaaagact tatgcgtccg agttgaatcc tcaaagaaaa ggttagaagc atagtacttc
    12961 cgatccaact ctaccttttc accgcgttta aaagcaatac cacgttgaat gagtcccaat
    13021 acttcttcat ttgagagggt ctccattgta accaagtgtt tgagtgaaac tttaccattt
    13081 gtaattgtca tgatgatacc tacctttatg atctagatgt agaatgagaa tttgtaaacg
    13141 aagcgactat gcaccttcaa ccagaaggac agcgtcttga ccatcgattt cagccatgtg
    13201 cacaatgatt tcttcagaac gactagttgg aatattcttc ccaacataat ctgctcgaat
    13261 aggcaactcc ctgtgtccac gatccacaag taccgctaaa ctaacacgag ctggacggcc
    13321 caaggacact atgttgtcaa tagcagcacg aatagttcgt cctgtataaa gcacatcatc
    13381 tactaatatt acatcacgat cattgacatt ggcagtcata tttgtcgtat catcttctac
    13441 cttcatgtca tctcgaaacg gcttggtatc caactcaccc aacggaacgt cgataccctc
    13501 taattgctta agtctctcct gaatcctctt tgcaatgaaa acaccccgtg ttttaatccc
    13561 tgcaaggaca atattatcca aattcttatt ccgttcgata atttcataag tgatgcgggt
    13621 gattgcccgt ttcatagtca tatcgtcaac gatttctttt gtcttcataa gacctccaaa
    13681 agtatagaaa aagtctcctt atacaaggag actatgaaaa tataggctag ttagaaccaa
    13741 cctgcttaac atccgactcc ttgtctgcct ctctggacag gttttaaagg atttattaag
    13801 cagagtatag cataaaatct cagccttgac aatttttttc tgaaaaaata tagaaattat
    13861 cggattttac tgagaatttt ttccaaaaga caatgaagtc ttaaggttta tggattttag
    13921 tcccgccaat agaaaaccgc agactagata ggcgacaaag atgactccag cataagtcaa
    13981 aacataggtc caaccatact tagggacatt aagaaagaaa taagcaaaag gactgtcctt
    14041 agcatctggg atcggaattt ttatgaaaag accattcact agaccaaaaa tcatgtagag
    14101 aacaggcaaa agcgtccacc aaatcgggtc aaaccacttg tactgttgct gacgatctac
    14161 tattagggta tctaacaaaa aatataaggg aacaatataa tggcagagta gattttcaag
    14221 tcgccagaaa tcatctgcca aaggtgccaa cataaagtga tagactacac aggtaatcat
    14281 gatagacatg gttacagcag cctttatccg aagaaaacgt gacgtctgta aatccacatt
    14341 tttactcatg gcatatacca tatagacagc gaacagagat accaataaat tagattgtac
    14401 cgtataatac atgagcatcc cgataccata tttaatgatt tctaaggcgg tacctgtgat
    14461 ggctaaaatg gctaacaggc atctactgta aaacaaaata ctttgatgtt tcataatatc
    14521 ctttcaaaaa caggaaaaga ctggttaacc agtcctctct cttagatttt cttaacaaat
    14581 tcagatttca acttcatggc accaaaacca tcgattttac aatcaatatt gtgatcgcct
    14641 tcaacgatac ggatgccttt aacacgtgta ccttgtttaa ggtccttagg cgcacctttc
    14701 actttcaaat ctttgataag tgtcacagta tcgccgtccg ccaaacgatt accgttagca
    14761 tcaattgcaa taggtccact ttcttcctca gctacatctg ctgggttcca ttcgtatgca
    14821 cactcagggc aaaccaagag ggcaccgtct tcatagacat attcagaatt acattttgga
    14881 caatttggta aagtttccat tcttactctc cttaacattt ttcatgttct agtatagcat
    14941 ttgttgaaaa aatgggcaag atgataaggt tttcatacta ttattcagcc ttgcgcagtt
    15001 tttcaagtgc ctcctgaaaa atagctggcg cttctgccgt aaattcaaca acctcaccag
    15061 ttctcggatg ggtaaatcca agcgttctgg catgaagaaa ttggccatgc ccttttagtg
    15121 ttttccttgg gccgtaagct tcatcacccg caaccggatg accaatataa gccatgtgga
    15181 cacgaatttg gtgagttcgt cctgtttcca aggtcaattc caccaaagtg tagtcaccaa
    15241 aacgctccaa aacctgaaaa cgtgtcaccg cttctttccc tttggcagtc accgcttgtt
    15301 tcttgcggtc tttttcagaa cgaccaatcg gcgcctcaat tactccgcga tcgtttggta
    15361 gattgccgtg tacaatggcc caatacttac gaagggattt cttatctttc aattcagcag
    15421 caagctttgt atgagcatca tcgtttttag caatcatgag caagccagat gtatccttgt
    15481 caatccgatg gacaatacct ggtcgcaaga caccattgat gcctgacaaa tcttttacgt
    15541 gataaaggag agcattaact agcgttccag acatgtgacc agccgacgga tgaacaacca
    15601 tcccttgagg tttatttaca acagcaacat cctcgtcctg aaagacaatc tctaaaggaa
    15661 tatcctcagc aacatagtcg atttcttcta cttctggaat ttgataggtt aggacatccc
    15721 caacctgtac actatattta gcttttttag gctgtccatt gaccaaaacc tgaccagcct
    15781 taatttgttc attggcaact gaacgagaca aatccgtcaa atccgacaat gccttatcta
    15841 aacgaatgcc accaacctca actcttactt ccattactct cttctttcat aatacaaata
    15901 aataaaatac ctacaccaac tgtcagacaa acatctgcta cattaaatac agggaaacta
    15961 ataaaatcca agtgaaacat gtccaccaca tatcccagtc taagacgatc aataaaattc
    16021 ccaagagcac cagcaatcat caaagacaga ctgaatagag tccagatatt gcccttgatc
    16081 tgtttgatat agtaccacac taggcctgtc acagctacaa ttgtcattat cgtgaaaaac
    16141 cactgctgat tttgtaaaat cgaccaggct gcaccataat ttcttagata agctaagctc
    16201 atcaatcctg gtataaattc cgttaccgta tctaattcaa cattggcaac tgtccaagct
    16261 tttacaagct ggtccagacc aattaatact accatcaaaa atggaaatcc aattttacgc
    16321 attttcatcc ttcttcttat caaaatatgc ctgcatggtt tcaataaagt ctttggcaca
    16381 agaactaagt tcatcattgg ctcgtttaac gtagaccatg cgattgtcta cctttccttt
    16441 gagaggaatt actgtaatgc cattgacact ctcatcatca agatagcccg aaccagttgc
    16501 ataggcatcc gtacgctcca aaattccatt caaagtagca cggtctgtca catcaaacac
    16561 aaccgaggaa tccgacgtat caatcaagtt ctcggaataa tagagataag cctctttttc
    16621 ttgagtgaac cgtacggtag gtagacctac caaatctgct ggctcaatct cagctttctt
    16681 tgtcaaagga tgatcttcac gaaggtagat atgagtctga aatgcagaca aatctacagc
    16741 ttgcaagtga agtttatcca atttctgcat gattcctttt gtatttctct cgttcaaata
    16801 aataatacca agctcgctat aaccttgagc aacttcatct aaaatctgta ctgtagtcga
    16861 ttcaaaaatg cgaaaatgag ggtactgcgg gtggctacga gagaactccg taatcaacgg
    16921 gggaagaaaa tcataatgct gacttgaaat tgaaaaagtc ttctcacctt cctcaggttg
    16981 caaatagaga tgctcaaact gatcaaatcc cttaactaaa gcctgagctt tctcatagaa
    17041 ttccatccct ttttgtgtca aaaaagttcc tgaactagtt cggctaaaaa tttgaaaacc
    17101 taactctttt tccaaatcac gaatggaaat ggacaaacta ggctgggaaa cgtacatttt
    17161 ctctgctgct tcccgaaaag taccactgtt ggcaatggct acaacgtagc gtaattgttg
    17221 aatattcata cctgatacct cttaaaactg cttctaccat tatatcaaaa aaagcaagaa
    17281 tttgctgaac tcttgcgttt tcgcaaatag actagcccgt cctgttcttt aaaactaatt
    17341 tcttgtataa cttccaggtt cccaaattct cttcttcaac tgcaatttga aaggctttgg
    17401 aatttctgtt cgccaaatca tcgatgacta attttactaa gttggaaccc ataccacttc
    17461 ctctgaacat ttcatctact cctgaacgta gaacttatag gaagcgcaac agtgcagaag
    17521 gcaaaatatt tttatcctat agtgaagata ttgccgtctt gaatcacttc tatcgtacac
    17581 ttttaaaaat atcaaaatca aattacaaaa aaagactctc cgaaaacaac tcggaaagcc
    17641 tattgttaag ccattttcag acttattttg cgattgggta aacagatact tgtttcttat
    17701 cgcgaccttt acgttcgaag cgtacaacgc cttctacttt agcgtaaaga gtgtcatctc
    17761 caccacgacc tacgttagct cctgggtaga tttttgtacc acgttggcgg taaaggattg
    17821 aaccacctga tacagtttgg ccgtcagcag ctttcgcacc aaggcgtttc gcttgtgagt
    17881 cacgaccgtt tgacgttgaa cctccacctt ttttgtgggc cataaattgc aagttagcaa
    17941 gattcaagtt taacatatgt tattcctccg aatttctgaa atgattgctt caagctacgc
    18001 gattaagcgt tgatagcgtt gataacaact tttgtgtaag gttgacggtg accttgtttg
    18061 cggtggctac cttttttagg tttgtacttg aaggtaacaa cttttttctg tttaccttgt
    18121 ttttcaacag taccaacaac agtagcgcct gctacaagtg gagtacccac aacagttttc
    18181 tcaccaccaa caagaactac ttcttcgaaa gtaacttctt gacctgcttc aacgttcaat
    18241 ttttcaacgt agatagcttg accgacttca actttaactt gtttgccgcc agttttaatg
    18301 attgcgtatg tgctcattat gcacctccta tggattttag ggccttgccc gaatttaatg
    18361 tgaagactcg cctagtaccg tgggacgaac cactttatat tgctcaataa aaattaagtt
    18421 cagactaggc gacgcggacg caggtagaac ttaggttcac caagttaagt caacgacgtt
    18481 tgagcttaat ttttgcagag caacggcatt cgtgcggttg cacaggatgt gtgcatagtc
    18541 aacagtccta ttataacaaa aacacctgca aatgcaagtg ttttgtatca tttttcttac
    18601 atttcaaaaa cttcgctctc ctgcttgttt ggtaagaaca gagagaggac gattccgaca
    18661 agagctggta ataaccatgc taatgattgt cctgccaatg gcagagctga aatgattgtt
    18721 gaaatagcag tccagttaaa ttgtcctgct aacacttcta ccaatgacaa agctgtcact
    18781 actcccacag ttaattgcat accgtaagta gaaagcggta caaatttgtt aacaatggta
    18841 atcaagacaa tacagatggt aattggatag agaaccaaaa gaactggaac tgagaaggta
    18901 atgatattgt tcaaaccaag gttggcaatc ccaaaaccaa tcaaagtaaa gatagtcgca
    18961 tatactttgt agctaaaacg tgggaaacgc tcagcgaaaa attcacctga agaaacaatc
    19021 aagccagccg ttgtcgtaaa gcaagtaacg ataaccatgg ctgccaagaa aatttgtgca
    19081 cctggtccaa aaatagcctg tgttgcttgc gaaagaatat aaacaccctt attggtatca
    19141 gaagccaaaa catcagcagg aactgggaaa tgatttccaa gaaatgccaa accgacatat
    19201 agtgctgaga aagctaaggc tacaacaaga ccaactgacc agatggttga gacatattcc
    19261 tttttgcttg agaaaccaag ttgtttcaag gtatttactg ctatgacact aaaagcaata
    19321 gaagcaagtg cgtcgagtgt attgtatccc tcgataaatc ctgtaccaaa tgcctgttct
    19381 gctgagtaag cttccgaagc tggtaacgga cttgttgatc cgtacttaac aataccaagc
    19441 acaaccaaaa ttacaatcaa aatcgcaaaa acaggggtta aaatacgtcc gatactattt
    19501 aagatttgtg acggattgag ggcgatcaga taagctgcca caaagtaaag agctgtaaag
    19561 ccaaacaacc agagatccag attcgcatcg cccaacaatg gcgcaatacc aatttcaaag
    19621 gacgttgttg ctgtacgcgg aatggcaaaa aaaggaccga tagccaaata caaggcaaca
    19681 agataaatcg ttgcaaaagt cggtgaaatc ttgcgagaaa tctcatgcac atatcctttt
    19741 gggtttaatg tcccgacaat caaggcaaca acagcaatac cgacacccga tacaacaaat
    19801 cctaaaatag ctggccagaa attctcacca gataagacac caagtgcagg tgggaaaatc
    19861 aagtttcctg caccaaaaaa cataccaaac aggagtaaac ctgttagagc tccttttttc
    19921 ataataactc ctttgtattt ttctgaagtc ttattatatc atacaaattc gatttttccg
    19981 aacgattcga actaaaaaat ccagcaatag ctggatttaa atgtatgtca aacaattgaa
    20041 atctacagta agtcttcaat caaactatcc acttcatctt tcacttcctc tttcggtgtg
    20101 atttcagtta cgataatccc agccacagct cgttccacca agccttcaac atccatacga
    20161 gcctcgtatt gctcgacatt tttgatttta gggttcttaa ttatttataa attcattgac
    20221 cgagacagct ttaccattat tatcaagccc gacacggacc tgataataat cctttccatc
    20281 cttaaggata gcgttggcta tacgcttatt tccatccgaa aaataaactg gaatatgttc
    20341 attgtcaatc gtaagatagc aataaatatc tgcatgactt gctctactgc cacctttttt
    20401 gatataaaag tgagatagga caccttgttt actttcaacg actggatgct ggaaaaaata
    20461 agcataagct gaaaaagtcc tcttaatgtc atagacagca acgaacccca ataggataca
    20521 aatgaacaga ataacataca tcatcacgtc aaagcgtaac tcttgaaata cttgttttac
    20581 ttttttaata atagcaagta attcccccct ccgtttagga agaagaaaaa ataaaataaa
    20641 tacaggagca aaggcatgct tgattattat tccaattaaa aatcctactg ttggcggctc
    20701 cccatacgaa atatttacaa aatgactgcg taatataaat gtatccccta tagcatggaa
    20761 tatatctgaa ataatatcca tctcattcgc tccttctctc caaattcgtc tatactaatc
    20821 aatcagtata ttagaaatgt aaacaatttc gttatttgaa ttcacctcta caagtgcagg
    20881 atatatattc ccttctagag accgaaagta ccgagcaatt gtctttgaac tattgctgac
    20941 attaaccgtt tgactagccc ccgcaatatg cacctgaaga actaatttag agtattgact
    21001 tctatagttt ccgatattgg tatcttttat agtcaccaat gcgtaagtcg ggcttagctc
    21061 ttgagaagta aaatagtggt agcgcgtcag cccattcacc acacgaaagc cgagaaaata
    21121 aacagtgata caaacaataa ataataaagt taggggaact gttagccaaa atagtgtacg
    21181 acccacaatt gaaatacggt tctggtaata gtgggaccaa tagttacgcc aacctccaga
    21241 tttcttcgta ttcttcacca aggaacggac aacaagaaca aacaccgaaa ggcagacaag
    21301 aaaattaatc actattccca atgtataggg ccaactcaag tgattcccta aaataacatt
    21361 tgttttctca ctatcccaac tcagtgcatg caaaagccca tccagaaagt catacatgct
    21421 acaacaactc ctcaattaaa ctatccactt catctttcac ttcctctttc ggtgtgattt
    21481 cagttacgat aatcccagcc acagctcgtt ccaccaagcc ttcaacatcc attcgagcct
    21541 cgtattgctc gacatttttg attttagggt tagtttttgg acggtcaggg gcaaagatgg
    21601 tacagcaatc ctcaaatggc tggatggaaa tatcaaaggt atcaatttct tgtgcaatat
    21661 caatgatttc caacttgtcc atggtaacga ctggacggat aacaggtgta tttgtcaccg
    21721 cattgatagc ctgcatggat tccagggtct gacttgccac ttgtcctaga ctttcaccat
    21781 tgataataac catagcacca cgctcttccc gtactcggtc tgtaatccgc atcatgaagc
    21841 ggcgtgtcaa ggtcatcaaa taagcttcag gtgctttttc cttgatttct tcctgaattt
    21901 ctgtaaacgg cacttcgata aaggtgatat taccaccaaa ggcagtcaat ttacgagtca
    21961 aatcatgggc ttttttaagt gcacctgggc tagtataagg cggacttgca aagtgaaggg
    22021 cttcaatttc aaccccacgt ttcagtgcta aatagcccgc aacaggcgaa tcaataccac
    22081 ctgataacat aagcgttcct tttccagatg ttccaactgg aagaccgcct gcccccttga
    22141 tttcttcatg ggaaatataa gcagcatcag gacggatttc cactcgcaag gtaatatctg
    22201 gtgacttcat ctgtacctgt acatttggaa tagctgtaaa aaccgcatct ccaaggactt
    22261 ggttaaggtc acggctgtcc aattcaaaac tgtggtcact acgacgtgct gcaatcttga
    22321 aggtcatccc ttccttgtaa atggtctgca ttatttccac aaccgcttct ttcaaagctg
    22381 gaacagactt ttcaatctta taagacggtg cgaaattttg gatcccaaaa atcttcttca
    22441 aagaagctga aacttcctga taatctgccc cattcaaata gacatgacca cggtcacggt
    22501 caaaataaac cgtcacttct gggtaaacag aaaggacatg cttgatatta ttgcggagtt
    22561 tgttaacaaa ccgcatcttg ttttttcctt tagttgacaa ttcgccatag cgaatcataa
    22621 tttctgaata gttcatgcta ccttactttc tgtgtgtttt gataaatttg tttgaaaatc
    22681 gtgaggaatt gttcgatttg ccccatatcg ttgtcatcat ccaagctgat acggacggca
    22741 gtttgagcca acttctgcgg aacacccatg gcaatcagtg ttccagctgg ttttccagcc
    22801 ttggacgagc aggctgaggt tgtcgaaatg taaatctggt ggtcttcaaa ggcatggaca
    22861 atgacttcac cacggatatt tttaatcccg aaagttacaa tactgggcac aaagtcctct
    22921 agcccagaaa agactgttac atcagcatat ttgcccaatt catccaccaa aatctgcttc
    22981 atagccgcca gcctcttctg gctgtctgtc gccttgtcta gggtcaagcg gagcgcttta
    23041 gcagttgctg cgatacctgc cacattttca gtagttgagc gtttatcgct ttcctgtcct
    23101 ccccctgtca atagcggagc gattttcttg cctgacttga catagacgaa acctactcct
    23161 ctgacggagt ggaatttgtg acctgaaaaa ctggcaaaat caactcggtc tgtcaaatac
    23221 cgttccgtcg gcaccttgcc gatagcctgc accgcatcca catggaagga gatggttggc
    23281 ttatcagcta acagttgaga tatttcctga atgggctgaa tagcaccaat ttcattattg
    23341 acggccatga tagaaaccag tgtggtatct ggacgaatca agctttctaa ggctgaaaca
    23401 tcaacaaaac cttgggcatt gaccggagcc aaatccacct caaaaccttg cgttttgagc
    23461 caaagtgcag actcttttac cgctggatgc tcaatagctg acacgatgat gtgcttgccc
    23521 agatgtgcct tttcaaatgc aactcccttg atgacccagt tgtcaccttc cgtaccacct
    23581 gaggtgaaaa agatttcttt gctatcctgg ccaagcaatt ctgcgatttg cttgcgagat
    23641 gcttctaaaa tacgggttgc ctgactgcct agactatgga ggctagaggg atttccccag
    23701 atttttgtcg ccacttccgt ataggtcttg agaacttctg gatagacctg tgtcgttgcc
    23761 gcattatcaa aatagatc
//
LOCUS       DBNFCX010000027        23693 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.027, whole genome shotgun sequence.
ACCESSION   DBNFCX010000027 DBNFCX010000000
VERSION     DBNFCX010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 23693)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23693)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23693
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.027"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            23..205
                     /locus_tag="AC1PJC_000941"
     CDS             23..205
                     /locus_tag="AC1PJC_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619938.1"
                     /translation="MKKLPTYIGVIIFVVTLLINWLLPSLAKVLNTFFIWTIVACLLY
                     TIYYWIRYWLYVRKQR"
     gene            complement(248..1765)
                     /gene="malQ"
                     /locus_tag="AC1PJC_000942"
     CDS             complement(248..1765)
                     /gene="malQ"
                     /locus_tag="AC1PJC_000942"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004134 - 4-alpha-glucanotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HIP6619939.1"
                     /translation="MKVRQSGVLMHISSLPGKYGIGSMGQSAYEFVDFLVRTKQRYWQ
                     ILPLGTTSYGDSPYQSFSAFAGNTHFIDFDILIDKGWLAAEDLHGVDFGQNPTEVDYA
                     AIFYARRPLLEKAVANMKAQGLPEDYWMFLGENDFWIHTFAEYMAIKEHFDLKPWTEW
                     EDQGARLRYHDTLEYYRHLLADRIDYHRITQYLFFSQWKALKAYANAKGVEFVGDMPI
                     YIAADSADMWANPHFFKTDEEGKPSVVAGCPPDAFSEIGQLWGNPIYDWEAMKHDGFT
                     WWVARLRESFKIYDMVRIDHFIGFASFWEIPAGEETAVNGYRVEAPGFELFDTIKREL
                     GDLNIIAEDLGSVTDKVIQLRDTTGFPGMKVLQFAFDPEGDSIEMPHNHPNNVVAYTG
                     THDNDTILGWYENETTKESRAFLDKYSNRREGETVSHALFRLLFGSPAFMAVATMQDL
                     LGLDGSARMNLPNTLGGNWTWRMTADQLTPEIEAELLDLTETYRRVNVHLVDEKS"
     gene            2067..3326
                     /locus_tag="AC1PJC_000943"
     CDS             2067..3326
                     /locus_tag="AC1PJC_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HIP6619940.1"
                     /translation="MKHNLLKSVALLAASTAVLAACSNSGSSTEASKSAEGSKELTVY
                     VDQGYESYINDVKADFEKENGVTVTVKTGDALTGLDNLSLDNQSGSAPDVMMAPYDRV
                     GSLGSEGQLSELTLADDSKADDTTTALVTNGGKVYGSPAVIETLVLYYNKDLLTEAPK
                     TFAELETLAKDSKYAFEGEAGKTTAFLADWTNFYYTYGLLAGYGGYVFGENGTDPKDI
                     GLANEGAIQAIEYAKTWYEKWPQGLQDGTAANNLINTQFTDGKAAAVIEGPWKAASYK
                     EAGVNYGVATIPTLVNGKNYSAFGGGKAWVVPTGAKNQEMAQKFVDFLTATDQQKALY
                     DATNEVPANTEAREYAVSKNDELTTAVINQFASAQPMPNISEMGSVWTPAGNMLFEAA
                     SGAKDAKTAATDAVKAIADEIAQKHSN"
     gene            3433..4728
                     /locus_tag="AC1PJC_000944"
     CDS             3433..4728
                     /locus_tag="AC1PJC_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003027817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HIP6619941.1"
                     /translation="MTMKQNPGKALLLSLIPGLGQIYNKQKAKGYIFLGVTLAFLVYF
                     IAIAAGELGNLITLGSVRGQDNSLFMLIRGSFHLIITVVYLAFYALNLKDARDTAKRW
                     NSGMPVATTLKEMVKGIYENGFPYLLIIPSYIAMTFAIIFPVVVTLFIAFTNYDFKHL
                     PPGALLDWIGITNFTNIWKLSTFRTAFGSVLGWTIIWALCASTAQIVIGILTAIIANQ
                     PFIKGKRVFGVIFLLPWAVPAFVTILTFSNMFNDSVGAINTQVLPFLSKFLPFIDNFL
                     IPWKTDPFWTKVALIMMQAWLGFPYIYVLTLGILQSIPNDLYEAAYIDGASAIQKFRN
                     ITLPMILAVAAPTLISQYTFNFNNFSIIYLFNNGGPGSVGGGAGSTDILISWIYKLTT
                     GTSPQYSMAAAVTLIISMIVISISMIAFKKLNAFEMEDV"
     gene            4730..5572
                     /locus_tag="AC1PJC_000945"
     CDS             4730..5572
                     /locus_tag="AC1PJC_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HIP6619942.1"
                     /translation="MKVSVKTRRILNQTLTYLYLIVLSVIIIYPLLITIMSAFKSGNV
                     VAFKLDSNINFTLDNFSKLFSETLYGTWYLNTLIIALLTMVIQTSIVVLAGYAYSRYN
                     FIARKQSLVFFLIIQMVPTMAALTAFFVMALMLNALNQSWFLIFLYVGGGIPMNAWLM
                     KGYFDTVPISLDESAKLDGAGHFRRFWQIVLPLVRPMIAVQALWAFMGPFGDYILSKF
                     LLREKEFYTVAVGLQTFISDVKNMKIAYFAAGAILIALPISILFFFLQKNFVSGLTSG
                     GDKG"
     gene            5704..6414
                     /locus_tag="AC1PJC_000946"
     CDS             5704..6414
                     /locus_tag="AC1PJC_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619943.1"
                     /translation="MNLWQRLFTTLFLVALLLIPSSLQTVNLETYPLENFVEGIYAPL
                     TDQVVDDLRQHAVIENNHLTYTGNTNWEQVTFGDTVSSSSDFTYQFANQSLTIRKGSD
                     ILSELTYEGLNTDDFASKETLTATISKKWYQSNRAAVGLSITLISTFILTTNLLFILL
                     GASFFLFLTKKSRFFHFETFAECYNFALNCLGLPTLIACLIGLFGQPVTTLLTIQNIL
                     FVLCLLWVFFKTKFRDEI"
     gene            6424..7407
                     /locus_tag="AC1PJC_000947"
     CDS             6424..7407
                     /locus_tag="AC1PJC_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HIP6619944.1"
                     /translation="MRATIKDVAKLAGVSPSTVTRVIQNSSAISQKTKDLVRKAMADL
                     NYHPNLNARSLVSSYTQVIGLVLPDDSDVFYQNPFFPTALRGISQVAADHNYAIQIST
                     GKNEEQRLEAISQMVYGKRVDGLIFLYSKPDDPLVQLAIQHKFPFLILGKADSPFISL
                     VDNDNIQAGFEATNYFINKGYKNIAFVAGNKELVVSQDRYTGYKNALKSHNIPLDENK
                     VKFVSGFLLEDSAYKISKKLLKQDLDAIVTTDTSVAEGVVKYLNEVGVKLPIISFDSV
                     KPKLDIEAYVDVHAIKLGRVAFNTLHQIINDNKEDKQVCYRRVIPHTITEL"
     gene            7431..9482
                     /gene="pulA"
                     /locus_tag="AC1PJC_000948"
     CDS             7431..9482
                     /gene="pulA"
                     /locus_tag="AC1PJC_000948"
                     /EC_number="3.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015445376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051060 - pullulanase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I pullulanase"
                     /protein_id="HIP6619945.1"
                     /translation="MALRQFQAFLDDVATIRLVMEKRFDSEHMSFSLESNDATSQLFI
                     HSCLEVDNLVIYYLTSLHALTLDKDYTIYDQDRNKTELGYGHIVRSTLFEQSYTYNGQ
                     DLGATYRPEATTFKLWAPISKQVFLVLEGNPHAMTKGAKGVWEITVEGDLEAHSYHYL
                     HKVNGEWISVHDPYALSSTANSGDSYVINPDKLHKIRRAKTQRPISQAIIYEMSVRDF
                     SWQKEAGFKHRSQFLGLTESPTMDGMKLGMDYIRELDVTHIQLLPVYDFGSVDENKPQ
                     AVYNWGYDPMQYNLPEGSYSSQPNDPYARILELQEAIQAYHDADISVIMDVVYNHVYH
                     AEKYAFELIVPGYFYRYDDHGMRTDGTFCGNDVASERSMVRNYIKQSLRQWLELYGFD
                     GFRFDLMGILDSETINQIQTELSAIHPNVYLYGEGWKMATGLEFEKLAHQYNAEHLPE
                     ISFFNDDYRDTFKKLLLNPNRLVDKQLHEKVQHLLTGSRLSHFLTPQQSLNYIECHDN
                     ATAFDYFHIENPNWTPQQQKRAASFGLQLILISQGMAFIHSGQEFFRTKDEIDNTYNV
                     PDRINRLDWTRAIRYKEHIEFIQELISFRKNNPILSQDNYESIQETCDFYWLTEYVLR
                     YQVTSEEKTIQFIINFADSDFTYEREKNKTVLYNYPPVEERDQQEITIAGQSICILED
                     K"
     gene            complement(9634..10086)
                     /gene="nrdI"
                     /locus_tag="AC1PJC_000949"
     CDS             complement(9634..10086)
                     /gene="nrdI"
                     /locus_tag="AC1PJC_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class Ib ribonucleoside-diphosphate reductase
                     assembly flavoprotein NrdI"
                     /protein_id="HIP6619946.1"
                     /translation="MKKKIYLVYISLSGNTESFVKRLKSFFQFQTDWEVELVHVKDLV
                     KRDIPFYQLDAPFVAFLPTYLEGGNGVDNGDVEILTNPLGDFIALGTNAELCLGVVGS
                     GNRNFNNQYCLTAKQYAERFNFPVIDTFELRGMQNDIERIGRKIMELM"
     gene            complement(10163..11101)
                     /locus_tag="AC1PJC_000950"
     CDS             complement(10163..11101)
                     /locus_tag="AC1PJC_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002265645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HIP6619947.1"
                     /translation="MKMNKFFRKQRVRFLRKARKNKFWSVILGISQEKYAERISGSII
                     YGLLSSIAVNFFFRPGNVYSSGVTGLAQIVSALAASYTGWNVPIAVVYYGLNIPLLIL
                     AWYKIGYKFTIFTFITVSFSSFFIQFMPPVTLTTDPLVNAIFGGLMLGTGIGFALRNN
                     VSSGGTDIVSIIIRKKTGRQVGSISLIVNIMIMLIAGMTFGWQYALYSMVALFISSRM
                     TDAIFVKQKRMQAMIITNHPERVIKKIHKKLNRGVTIINGAEGAYNHEQKTILITIIT
                     RAEFNDFKHIMKKADPKAFVSVADNVNIIGRFVESD"
     gene            complement(11088..12839)
                     /gene="aspS"
                     /locus_tag="AC1PJC_000951"
     CDS             complement(11088..12839)
                     /gene="aspS"
                     /locus_tag="AC1PJC_000951"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HIP6619948.1"
                     /translation="MKRSMYAGRVRKEHVGQEITLKGWVGRRRDLGGLIFIDLRDREG
                     IMQLVINPESVEAEVMAKAESLRSEFVIEVTGTVVEREQANDNIPTGAVELQVTSLTV
                     LNTAKTTPFEIKDGIEASDDTRLRYRYLDLRRPEMLNNFKLRAAVTHSIRNYLDDLEF
                     IDVETPMLTKSTPEGARDYLVPSRVSKGHFYALPQSPQITKQLLMNAGFDRYYQIVKC
                     FRDEDLRGDRQPEFTQVDLETSFLNEVEIQDIVEGLIAKVLKDTKGIDVTLPFPRMSY
                     DHAMNFYGSDKPDTRFEMLLQDLTELVKEVDFKVFSEAPVVKAIVVKGAADSYSRKDI
                     DKLTEYAKQFGAKGLAWVKVDQGELAGPVAKFLTDITANLTASLQLEDKDLVLFVADE
                     LEVANNTLGALRNRLAKEQGLIDESKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPT
                     EETAHHLDGDLAQVRAVAYDIVLNGYELGGGSLRINQKDMQERMFKALGFSAEDAHEQ
                     FGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGEDNIREVIAFPKNNKASDPMTQAPSTV
                     ASAQLEELALDITLENE"
     gene            complement(12934..13386)
                     /locus_tag="AC1PJC_000952"
     CDS             complement(12934..13386)
                     /locus_tag="AC1PJC_000952"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIP6619949.1"
                     /translation="MKWEIKTFEQLSLQELYTILTLRTDVFVVEQACPYPEIDGKDPN
                     CLHLLGTDNGELVAYLRILPAGISYDEVSIGRVVIKPSHRGKGLGRPMMEQAIHYITN
                     EWKESQIKIGAQAYLEKFYQSLGFEPISEVYLEDDIPHLDMLYRKPVN"
     gene            complement(13396..14307)
                     /locus_tag="AC1PJC_000953"
     CDS             complement(13396..14307)
                     /locus_tag="AC1PJC_000953"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HIP6619950.1"
                     /translation="MQELGQTGLQVPRIALGCMRMASLSGQETANVLDTVVGQGINFF
                     DHADIYGGGESEIRFAQGAKLAGLKREDLLLQSKCGIRKGYFDFSKEYILESVDGILK
                     RLDTEYLDVLALHRPDALMEAEEVAEAFYLLKKAGKIHHFGVSNQNIYQMELLQSYLD
                     QPLAVNQLQLSPAHTPLIDAGLHVNMKDDAATMRDGGLIDYCQLKKITIQAWSPFLID
                     LQRGIFANHPDYALLNQTIGEIAERYNVSHETIVVAWILRHPAKIQTIVGSMNPERLT
                     KIAQASQITLTRPEWYEIYRSAGNILP"
     gene            complement(14375..15388)
                     /locus_tag="AC1PJC_000954"
     CDS             complement(14375..15388)
                     /locus_tag="AC1PJC_000954"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018377584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HIP6619951.1"
                     /translation="MTLLSIAIPSYNSESYLHYCVHSLVMGGDKVEILIINDGSTDRT
                     QEIAEELANQFSNVRAIYQENKGHGGAVNTGIREAKGKYFKVVDSDDWVDTRAYLKIL
                     ESLQALEDENTPVDAFISNFVYEKEGQSRKKSMSYQSTLPENRIFGWEDVGAFSKGQY
                     MMMHSLIYRTDLLREVGLVLPEHTFYVDNIFVFTPLQAVKTMYYLPVDFYRYFIGRND
                     QSVNESVMIKRIDQQLKVNRILVDNLDLEAIDNPDLRSYLLNHVEITTIISCALLNRA
                     GTAEHMMKKQELWHYIRDNNPALFKIVRKGLLGQLTNLYGYPGRKISNAVYKIAKRIY
                     GFN"
     gene            complement(15433..17832)
                     /locus_tag="AC1PJC_000955"
     CDS             complement(15433..17832)
                     /locus_tag="AC1PJC_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /protein_id="HIP6619952.1"
                     /translation="MKHQEIINRLTLEEKAALMSGKSVWETKDYPDKGIPSIFLSDGP
                     HGIRKQEGEGDHLGLNASVPATCFPTAATLANSWDVDLVERVGQGLGAEANSLGVNVI
                     LGPGLNIKRSPLCGRNFEYYSEDPYQAGKLAAAMIRGMQSQGVAATPKHFAVNSQELR
                     RMASDSIVDERTLRELYLTGFEIAVREGNPKAIMSAYNKINGVYANEDKRLLRDILRD
                     EWGFTGFVVSDWGGSNDHVLGVENGSHLEMPGTKKVGQKEIIDAIQSGRLSEQVLNER
                     VDELIDVVLELAHAEKRSVDYSEQHELARQAATESIVLLKNKDQILPLSSETKIALIG
                     EFAQNPRYQGAGSSLINTRQLDKTVDCIADYPLNVIGYEQGYQRVDKEDRVLVDRAVN
                     LANQAELVLYYMGLDEMSESEGLDRHHISLPKNQLSLLNALVGTGKKIVVVLSAGSVV
                     DMNWDVDVDAVLHGYLSGEAGARAMLDTLTGRVNPSGKLSETYPINLADVPSSDDYPA
                     EGDFALYKEALYVGYRYFTSLDKTVKYPFGYGLSYTDFSYSQLDVTELGVTVTITNTG
                     LVDGAEIVQLYVGKEDSQIYRPAKELKGFKKVYVKAGESKQIFIPFEDYTFRYFNKET
                     GQFEVEAGNYLLYVGASSQDIRLVGEITREGTVDQFPASEQLPTYLTAQVQAVSEQDF
                     AQLLGRPVPEETWKIGQELSLNDPVLKLQFAKSGLARGVHKLLAGLLKKAEQKGTPDL
                     NLLFLYNMPFRAMAKMTGDMLDLPMVEGILTIVNGHFFKGLGQLWRAYQAKRKYQKQL
                     S"
     gene            complement(17983..18462)
                     /locus_tag="AC1PJC_000956"
     CDS             complement(17983..18462)
                     /locus_tag="AC1PJC_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018377592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HIP6619953.1"
                     /translation="MKEWIAKHPDLWEFIKFNVLSNIATITNFCVLWLSTNFLFTALS
                     SQPFHWFIFHYSVENGGLNGFLSFLLAYIAAQVVNYIVQRKLVFGAENDISKTLHWYI
                     LTVVVAGILSIVLPPYTTQLFTSWGLSLGWAQTAANWVNIFVQVAVNYPMMKFVIMK"
     gene            complement(18501..21410)
                     /locus_tag="AC1PJC_000957"
     CDS             complement(18501..21410)
                     /locus_tag="AC1PJC_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /protein_id="HIP6619954.1"
                     /translation="MKAWKKKGALLSLAGALLSGKTVYADSYPSSYQSWDAVGIVKTV
                     FICSAVVVLGLLGFAIYRVVKEKSLSSKKKKLGFSLLALLSIIIVGANYAVNMFVNVI
                     DTYFAPSYADAAKIADAEEVSKSLVTTIQEEGTVLLENKNKTLPLEKSSKVNVFGISS
                     VAITYGGSGSGAADESKNINLQQGLENAGFEVNSELTDFYIENLPEKEGTNIFSLNGG
                     DYNIYEPTQDKYSEELLANAKNFSDTALVVISRNGGEGADLPQNMAEYQQGDKDKHYL
                     ELQEVEKAMLKTVTENFDKVVVLVNSSNAMELGFLEDAGVDAALWIGGPGSTGLTGVA
                     NILAGEVNPSGRLVDTYAYDLKSNPTYWNTGDFSYTNITYEDTPWGAKEPQTFNYKFV
                     NYQEGIYLGYRYYETRFIDNATGQVDEAAYDATVQYPFGYGLSYTKFDQEITSMKENG
                     DKIEVNVKVTNTGDVAGKEVAQVYYTAPYTEGGVEKSHVVLAGFDKTEVLDPGQSEEM
                     TISFDRDDMASYDEKTEKAYVLDEGDYQIKLMNNAHDVLDSETYTVDSKEVLKQRSSD
                     KAEVTNAFEYAVGDVNYVARADWESTLPTERTKDKEASEQIAAEVDRSNFRIDESSET
                     PIDTVTTEDNGLRLVDLIGADYDDERWERLVAQMSVDEMVNLVGFGGYATGAVKSIDK
                     PAVVDLDGPAGINGIFQGIKGIQYNSEVVVASTWNTDLAEEMGDAFAKEALAHGIVGL
                     YAPAVNIHRSPFSGRNFEYYSEDPLISGKMASSLVAKALENGVYTFTKHFALNDQEDN
                     RDGVATWSNEQAIREIYLKAFEIPVKEGGATAIMSSFNRIGTLWAGGNGDLLNTVLRD
                     EWGFKGMVITDFAGKDYMSPDQAIRNGGDLMLTPMGSLPTAASTGTEEGVAALRQASK
                     NILYTVAHSAAFDIYKPKTKWWIVALVASNIALIGLTGLGLVKLTGKKKEEKEVA"
     gene            21649..22362
                     /locus_tag="AC1PJC_000958"
     CDS             21649..22362
                     /locus_tag="AC1PJC_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytR/AlgR family response regulator
                     transcription factor"
                     /protein_id="HIP6619955.1"
                     /translation="MKIAIVEDQKIEQDRLSNYIKTYCQEAGIAVEISCFNDGLHITS
                     DYQKQFDLIYLDVEMEIMDGMTTAQKIRSVDKEVLLVFVTNHSHVAIQGYSVEAIDFL
                     LKPLRSFVFEEHFKKILRKLPDSQEKQSLYIKSKQSTVKLYQEDIVYLESQGHQVYIY
                     TVDGGLTITHNSLKNLEAMLDSKVFVRAHSAYIINLSHVQKVEGSLVYVTNTALPISR
                     PRKREFMTALTNFIGDSLL"
     gene            22359..23666
                     /locus_tag="AC1PJC_000959"
     CDS             22359..23666
                     /locus_tag="AC1PJC_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GHKL domain-containing protein"
                     /protein_id="HIP6619956.1"
                     /translation="MINFPDIPRFYTALTESLACLVVCSSLVLSEKWARKQFRILLIF
                     LIQILLQLVAGKLPLLFWTVGMGINIAWMFVSIRLLGVIHKRTSLYLTAKAFIIAELV
                     ASITWHLYCLTIYQQPVDNLWTQGLFLLITSLLSYWLIYLQDQKVRLEELDKFIEQRD
                     VTVAVFTTLSIFVLSNIGFILSGTRQFQDSTSIFILRTTVNLSGLLLLFTQESQQYDR
                     YLRQELTSINNIFQLQYKQYQAYRENSEILDRKVHDLKHQLTIIQQESDKTKKEQYLE
                     EMSEVIQTLDAKIETGNPVLDTILSQKNYYCLQNGINFTCIVQGEPLHFMDVMDISAL
                     FGNAIDNAIEAVEKIDNPEQRLITLKVACHQQFLIIRLDNYDTSSLDLSTGQLPATSK
                     ANKDYHGFGLKSMEYVANKYGGSLTLSKEDNWVQLKIILPLQA"
BASE COUNT         6891 a         5464 c         4429 g         6909 t
ORIGIN      
        1 taaatttaaa ggaggaaaac tcatgaagaa attacccacc tatatcggag tgattatttt
       61 tgtagttacg ctactgatta actggttatt gccaagtctt gctaaagtgc tgaatacatt
      121 tttcatttgg actatcgtag cctgcctact ctacaccatc tactactgga ttcgctactg
      181 gctctatgtc cgtaaacaaa gataacaaag gctcctctaa gttagctgct tagaggagtt
      241 cattttatta tgacttttca tcaaccaaat gcacattaac ccgacgatag gtttctgtaa
      301 ggtctagcaa ttccgcttca atctctggtg tcaattgatc tgccgtcatt ctccaagtcc
      361 agttacctcc aagtgtattt ggcaagttca tgcgagccga accatccaaa ccaagtaggt
      421 cctgcatagt agccaccgcc ataaaggcag gtgaaccaaa gagcaggcgg aaaagagcat
      481 gactgaccgt ttcgccctca cgacgattgc tgtacttatc taagaatgca cgcgattctt
      541 tcgttgtttc attttcgtac cagccaagaa tcgtatcatt gtcatgggtt cccgtatatg
      601 ccaccacatt attaggatgg ttatgtggca tttcaatgct gtctccttct ggatcaaaag
      661 caaactgcag gactttcata ccaggaaaac ctgttgtatc acgtaattgg atgaccttgt
      721 ctgtcacaga gcccaaatcc tcagctatga tatttaagtc tccgagttca cgtttgattg
      781 tatcaaataa ttcaaaacct ggtgcttcga cacgatagcc atttacagct gtttcttcac
      841 ccgctggaat ttcccagaaa gaagcaaagc cgataaagtg gtcgatacgt accatatcgt
      901 atatcttaaa ggattcacgt aaacgagcaa cccaccaagt aaatccgtca tgcttcatcg
      961 cttcccaatc ataaatcgga ttgccccaaa gctgaccaat ttccgaaaag gcatctggtg
     1021 ggcatcctgc aaccacactc ggcttgcctt cttcatccgt tttaaagaaa tgtggattag
     1081 cccacatatc ggcagaatca gccgcgatat aaatcggcat atccccaaca aactcaacac
     1141 ctttggcatt ggcataagcc tttaaagcct tccattgtga aaagaataaa tattgtgtaa
     1201 tgcggtgata atcaattcga tctgccaaca agtgacgata atattccaag gtatcgtggt
     1261 aacgtaagcg cgccccttga tcttcccact ctgtccaagg tttgagatca aaatgctctt
     1321 ttatagccat atactccgca aaggtatgaa tccaaaagtc attctcccct aagaacatcc
     1381 agtaatcttc tggcaagcct tgtgccttca tgttggcaac tgccttctcc agtaatggac
     1441 ggcgagcata aaaaatggct gcgtaatcta cctctgtagg attctgccca aagtcaacac
     1501 cgtgtaaatc ctctgctgcc agccagcctt tatcaatcaa tatatcgaaa tcaataaaat
     1561 gagtattccc tgcaaaagct gaaaatgact ggtaaggaga atctccataa ctggttgttc
     1621 ccaaaggtaa gatttgccaa tagcgctgct tagttcttac caaaaaatca acaaattcat
     1681 aggccgattg tcccatggaa ccaattccat attttcctgg taatgatgaa atgtgcatca
     1741 gcacaccact ctgtcttact ttcataagct ctcctatcta atccgcttac acgacgcaaa
     1801 cgttttctct ttttcattat atactgaaaa cggtaacaaa tcaagggatt ttcctttaat
     1861 tctgtttgtt cctataccat tccatatttc tcttcattat atgtacaaaa aaattcatat
     1921 gttttttaaa actcaaaaaa atttttaaat ttttttataa aaacgcttgc aaacggattc
     1981 aatctggtgt ataatgaagt caacttagga aaacgtttgc gcaatgcaga cgtcacacaa
     2041 aactatttat cttcggaggg aagaaaatga aacacaatct ccttaagagc gttgctcttc
     2101 ttgctgcatc aactgctgtt ttagctgctt gctcaaactc aggttcatca acagaggcat
     2161 ctaagtctgc tgaaggtagc aaagaattga ctgtctacgt tgaccaaggt tatgaatctt
     2221 atatcaacga cgtcaaagct gacttcgaaa aagaaaatgg tgtgactgtt acagttaaaa
     2281 ctggtgatgc tttgactggt ttggataact tgtcattgga caaccaatct ggttcagctc
     2341 cagacgttat gatggcacca tacgaccgtg taggtagcct tggttctgaa ggtcaattat
     2401 ctgaattgac acttgcagat gatagcaaag cagatgacac aacaactgct cttgtaacaa
     2461 acggtggtaa agtttacggt tcaccagcag ttatcgaaac acttgttctt tactacaaca
     2521 aagacttgtt gactgaagct cctaagacat ttgcagaact tgaaacactt gctaaagata
     2581 gcaaatacgc cttcgaagga gaagctggta aaacaactgc cttccttgct gactggacaa
     2641 acttctacta cacttacgga cttctagctg gttacggtgg ctacgtattt ggtgaaaacg
     2701 gtactgatcc aaaagacatc ggtcttgcta acgaaggcgc aatccaagcg attgaatacg
     2761 ctaaaacttg gtatgaaaaa tggcctcaag gtcttcaaga cggtactgct gcaaacaact
     2821 tgattaacac tcaatttaca gatggtaaag cagctgctgt tatcgaagga ccttggaaag
     2881 cagcttcata taaagaagct ggcgtaaact atggtgtagc aacaatccca actcttgtaa
     2941 acggtaaaaa ctactcagca ttcggtggtg gtaaagcgtg ggttgttcct acaggcgcta
     3001 aaaaccaaga aatggctcaa aaatttgttg acttcttgac tgctacagac caacaaaaag
     3061 cactttacga cgctacaaac gaagttccag ctaacactga agctcgtgaa tatgctgtaa
     3121 gcaaaaatga cgaattgaca actgcagtta tcaaccagtt cgcttcagct caaccaatgc
     3181 caaacatctc agaaatgggt tcagtttgga caccagctgg taacatgctc ttcgaagctg
     3241 caagtggtgc aaaagacgct aaaactgctg caacagacgc tgtgaaagct attgcagacg
     3301 aaattgctca aaaacacagc aactagtcaa gtttaaagtt ggactgggag ttcctcccag
     3361 tctactttat tacttaacga taaactgaat agataaaatc gaccatctat tcagaagcta
     3421 tataaggaga ctatgactat gaaacaaaat ccaggtaagg cactcctttt gtccctgatc
     3481 cctggtctcg gacaaatcta caataaacaa aaagccaaag gatacatctt tttgggtgtt
     3541 acccttgcct tccttgttta ttttattgct attgcagctg gtgaattagg caacttgatt
     3601 accctcggta gtgttcgtgg acaagataat tcactattca tgctgattcg cggttctttc
     3661 catttgatta tcacggttgt ctatctcgct ttctatgcac tcaacctaaa agatgcacgt
     3721 gatactgcga aacgatggaa ttcagggatg ccagtagcta ccacattaaa agaaatggta
     3781 aaaggtatct atgagaatgg tttcccatat ctcttgatta tcccatcata tattgcgatg
     3841 acctttgcta tcatcttccc agttgtcgtt acattgttta tcgcctttac aaactacgac
     3901 ttcaaacacc tgccaccagg tgccttgttg gattggattg gtattactaa ctttacaaac
     3961 atctggaaac taagcacatt ccgtacagca tttggctctg tacttggctg gacaattatc
     4021 tgggcactct gcgcttcaac agctcaaatt gttatcggta tcttgacagc catcatcgca
     4081 aatcagccat tcatcaaagg aaaacgcgtc ttcggtgtta tcttcttgct cccatgggct
     4141 gttcctgcct tcgtaactat cttgactttt agtaacatgt tcaacgatag tgtcggcgct
     4201 attaacacac aggtattgcc attcctgagc aaattcctac cattcatcga taatttcctt
     4261 atcccttgga agaccgaccc attctggact aaagttgccc tcattatgat gcaggcttgg
     4321 cttggtttcc cttatatcta tgttttgacc ttgggtattt tgcaatccat tccaaacgac
     4381 ttgtatgaag ctgcttacat tgatggtgca agtgccattc aaaaattccg taacatcacc
     4441 cttccgatga ttttagcagt agcagctcca acactaatca gtcaatacac cttcaacttc
     4501 aacaacttct ctatcatcta cctcttcaac aatggtggtc ctggtagcgt tggtggtgga
     4561 gcaggttcaa ctgacatctt gatttcatgg atttataaat taaccacagg tacatcacct
     4621 caatactcaa tggcggcagc agttacattg attatctcaa tgattgtcat cagtatttcc
     4681 atgattgcct tcaaaaaact aaatgctttt gaaatggagg atgtataaga tgaaagtatc
     4741 tgtaaaaact agacgcatac tcaatcagac cttaacctat ctctatctga ttgttctgtc
     4801 tgttatcatc atctatcctc tcttgattac aatcatgtcc gccttcaagt ctggtaacgt
     4861 ggttgccttc aaattggata gcaatatcaa ctttacacta gacaatttca gcaagctctt
     4921 tagcgagact ctatacggaa cctggtacct caatacgctt atcattgctc tcttgacaat
     4981 ggttattcaa acaagtatag tggtactagc gggttacgct tatagtcgct ataacttcat
     5041 cgctcgtaag cagagtttgg tcttcttctt gattatccaa atggtaccaa ccatggctgc
     5101 tcttaccgcc ttcttcgtta tggccctcat gctcaatgcg ctcaaccaaa gctggttcct
     5161 catcttcctt tatgtcggtg gtggtatccc aatgaacgct tggctcatga aaggctactt
     5221 cgatacggtg ccaatctcac ttgatgaatc tgcaaaacta gacggtgccg gtcacttcag
     5281 acgtttctgg caaatcgtcc tcccactcgt tcgtccaatg attgctgtac aagcgctctg
     5341 ggccttcatg ggaccttttg gagattacat cctatccaaa ttcttgcttc gtgaaaaaga
     5401 attctatact gtagctgtcg gccttcaaac cttcatcagt gatgtgaaga atatgaagat
     5461 tgcctacttt gcggcaggtg ccattcttat tgccctccct atcagtatcc tattcttctt
     5521 cctacaaaag aactttgtat ctggtttaac aagcggtggc gacaagggat aaccctgtcc
     5581 caccttttcc ctttttaggg gaaacattga tatttatgaa aggtccaacg aatgctccca
     5641 tatccttttt cctatttttc tagtatcttc tctccaagaa atatgtttgc caatcgtaga
     5701 ctaatgaacc tttggcaacg gttgtttaca acgctttttt tagtggcgct cctgctcatt
     5761 ccgagctccc tacagactgt caatctcgaa acctatcctt tagaaaattt cgtagaaggt
     5821 atctatgcac ctctgacaga tcaggtcgta gatgacctcc gtcaacatgc agtcatcgaa
     5881 aacaaccacc taacctatac tggaaatact aactgggagc aagtgacatt tggtgatacc
     5941 gttagctcta gttctgactt tacttatcaa ttcgccaatc agtctctgac tattcgtaaa
     6001 ggaagtgata ttctaagcga attgacttat gaaggtttga atactgacga ttttgctagt
     6061 aaggagacct tgactgctac catctctaaa aaatggtatc aatccaaccg agcagctgtc
     6121 ggactatcca tcactcttat ttcgaccttt attttaacaa caaacctact cttcatccta
     6181 ctaggagcca gcttcttcct ctttttgact aaaaagtctc gtttcttcca ttttgaaacg
     6241 tttgcagagt gctataattt tgctctcaac tgtctgggcc tgcctactct tatagcctgt
     6301 ctaattggac tatttggtca acctgtgact acccttctga ccatacaaaa tatcctattt
     6361 gtgctatgct tgttatgggt atttttcaaa acaaaattca gagatgaaat ctaggaggtc
     6421 tatatgcgtg caaccatcaa agatgtggct aaattagctg gtgtctcgcc atctacagtt
     6481 actcgtgtca ttcaaaatag ctctgccatt agccaaaaaa cgaaagactt ggtgcggaaa
     6541 gccatggcgg atctcaacta ccatccaaac ctcaacgctc gaagcctagt ttctagctat
     6601 acacaggtta tcggactggt tttgccagat gactcggatg ttttctatca aaaccccttc
     6661 ttccctactg ccttacgagg aatttctcaa gttgcggcag atcataatta tgccatccaa
     6721 atctccacag gaaagaatga agaacaacgt ctagaagcga tttctcagat ggtctacggc
     6781 aaacgagtgg acggccttat cttcctctat tccaagcccg acgatccatt ggtacaatta
     6841 gctatccaac acaaatttcc cttcctcatt cttggtaagg cggattctcc attcatatca
     6901 ctagttgata atgataatat ccaggccggc tttgaagcta ccaactactt tatcaataaa
     6961 ggttacaaaa acattgcctt cgtcgctggt aacaaagagt tggtcgtatc tcaagaccgt
     7021 tatacaggtt acaagaacgc ccttaaatcg cacaatattc ccctggatga aaacaaggtc
     7081 aagtttgtgt ctggcttcct tctcgaagac agtgcctata aaatttctaa gaaattactc
     7141 aaacaagacc tggatgcaat cgtcacaacc gacacttccg ttgccgaagg tgttgtcaaa
     7201 tatctcaacg aagtcggagt caaacttcct atcatttctt ttgactccgt caagccaaaa
     7261 ctagatattg aagcctacgt tgacgtccac gctattaaac taggacgcgt cgcattcaac
     7321 actctgcacc aaatcatcaa tgacaacaag gaagacaagc aagtctgcta ccgacgtgtc
     7381 attccacata ccatcaccga actctaactt agaaaggagc cttttggctc atggcattac
     7441 gacaattcca agcattcctt gatgatgtag caactattcg cttggtcatg gaaaaacgat
     7501 tcgactccga acatatgagc ttctcactcg aatcaaacga tgctacgtct caacttttta
     7561 tccattcctg tctagaagta gacaatctcg ttatctatta tctaaccagc ctccatgcat
     7621 tgacattgga caaggactat accatctacg accaggaccg taataaaact gaactcggct
     7681 atggtcatat cgttcgctct acactttttg aacaaagtta tacatacaat ggccaagact
     7741 tgggagcaac ctatcgacca gaggcaacaa cctttaagtt atgggcacct atttctaagc
     7801 aagtttttct tgttctagaa ggaaacccac atgcaatgac gaagggagca aagggagttt
     7861 gggaaattac tgttgaagga gacctagagg cgcacagcta tcactatctc cacaaagtaa
     7921 acggtgaatg gatttccgtt cacgatccct acgccctgtc ttccacagcc aactcaggtg
     7981 acagctacgt tatcaatcca gataaacttc ataaaattcg tcgtgctaag acccaacgac
     8041 ctatttctca ggccattatc tatgaaatga gcgtccgtga tttctcatgg caaaaagaag
     8101 ctggtttcaa gcatcgcagt caatttctcg gcttgacaga atctcctacc atggatggaa
     8161 tgaagttagg aatggattac atcagagaac tagacgttac ccatattcaa ttattgcctg
     8221 tttatgattt tggcagtgtg gatgaaaata aaccccaagc tgtttacaac tggggctacg
     8281 atcctatgca atacaatctg ccagaaggtt cctattctag ccaaccaaac gatccttacg
     8341 cacgtattct agagctacaa gaagctatcc aggcctacca tgatgcagat atttcagtta
     8401 ttatggacgt tgtttacaac cacgtctatc atgctgaaaa gtacgcattt gagctcattg
     8461 ttccaggcta cttctatcgc tatgatgacc acggcatgcg aacagacggg acattctgcg
     8521 gtaacgacgt tgccagcgag cgcagtatgg tccgcaacta catcaaacaa tcccttcgcc
     8581 aatggctaga actctatggt tttgatggct tccgtttcga ccttatgggt attttagata
     8641 gcgaaacaat caaccagatt caaactgaat tatctgccat tcacccaaat gtctacctct
     8701 atggtgaagg atggaaaatg gcaacaggcc tcgaatttga aaagctggct caccagtaca
     8761 atgcagagca tttacctgaa atcagcttct tcaatgacga ttaccgtgat acctttaaga
     8821 aactcttgct caatccaaac cgtctagtag ataagcaatt gcacgaaaag gtacaacatc
     8881 tcctgactgg tagccgatta agccatttct taacgcctca acagtccctc aactatatcg
     8941 aatgccatga taatgctaca gcatttgact atttccatat tgagaatcca aactggacac
     9001 ctcaacagca gaaacgtgct gcaagttttg gacttcaact gattttgatt tctcagggta
     9061 tggcctttat tcatagtgga caagaatttt tccgtacaaa agatgaaata gataatactt
     9121 acaatgtccc tgaccgtatc aaccgtctgg actggacacg agctattcgt tataaggaac
     9181 atatcgagtt cattcaggaa ttaattagct tccgcaaaaa taatccaata ctcagccagg
     9241 ataactacga aagtatccaa gaaacttgtg atttctactg gttaactgaa tatgttcttc
     9301 gctatcaagt gacaagtgaa gaaaagacca ttcaatttat catcaacttt gcggatagcg
     9361 actttaccta tgaacgtgaa aaaaataaga cagttctcta caactatcct ccagtcgaag
     9421 agcgtgatca gcaagaaatc acgattgcag gacagagtat ttgcatttta gaagacaaat
     9481 aggactttag accgatgaaa cacgatatag tctgaggtat actatagtca atcctaaata
     9541 tttttcataa tctccttaaa actcactggt cacactggtg agtttttttg tgtgacaaaa
     9601 aaacaaccca gcataaaact gagttgaggc tctttacatc aattccatta tcttccgacc
     9661 aatgcgttca atgtcattct gcatccctct aagttcaaag gtgtctataa caggaaaatt
     9721 aaatcgctca gcatattgct tagcagtcag acaatattgg ttgttgaaat ttcgattgcc
     9781 tgagccaacg acacccagac agagctctgc attggtcccc aaagcaataa aatctccgag
     9841 aggattggtc agaatttcca catctccgtt gtccactcca tttccacctt ctaagtaggt
     9901 tggtaaaaag gcgacaaagg gtgcatctag ctgatagaaa ggaatatccc gcttgaccaa
     9961 atctttaaca tggaccagtt caacctccca gtcagtttga aattggaaaa aggactttag
    10021 gcgtttcaca aaactttctg tattgccact caaactaatg taaaccaaat atattttctt
    10081 cttcatacat ttcctcttta taataaaaac actacatgta gactgtaaat actattttac
    10141 tcctacatgt agtgtttgtc aatcagtcac tttccacaaa ccgaccaata atattaacgt
    10201 tgtcagctac cgatacaaag gctttggggt ctgccttttt cataatatgc ttgaaatcat
    10261 tgaactctgc acgagtgatg atggtaatga gaatcgtctt ttgctcatgg ttataagcac
    10321 cctcagcacc gttgataatg gtcacaccgc gattgagctt cttatggatt ttcttaatga
    10381 ctcgttcagg atgattggtg ataatcatgg cctgcatccg tttttgtttc acgaaaatcg
    10441 catctgtcat gcgactggag ataaacagcg caaccattga atacagggca tattgccagc
    10501 caaaggtcat ccctgcaatc aacataatca taatgttgac aatcaaggaa atggagccaa
    10561 cttgacgtcc cgtcttcttg cgaataataa tagagacaat atcagtacca ccactggata
    10621 cattgttcct aagcgcaaag ccaatcccag ttcccagcat gagaccaccg aaaatagcat
    10681 tgactaacgg atccgtcgtc agggtaactg gcggcataaa ttggataaag aaagaactga
    10741 aggatactgt aataaaggta aagatagtaa atttataacc aattttatac caagctaaga
    10801 taagtaaggg gatgttcaga ccgtagtaga ccaccgcaat cggtacattc caaccagtgt
    10861 aagaagctgc cagagcagaa acaatctgtg caagaccagt aactccagac gaatagacat
    10921 tccctggtct aaagaaaaaa ttgactgcaa tactagatag gagtccataa ataatggacc
    10981 ccgatatccg ttcagcatat ttttcctgag aaattcccaa aatgaccgac caaaacttat
    11041 tctttctggc ctttcttaaa aagcgtacac gctgttttct gaaaaattta ttcattttca
    11101 agtgtaatgt ctaaagccaa ttcctctaat tgtgctgagg caaccgtact tggtgcctgc
    11161 gtcatcggat cagatgcctt gttattcttc ggaaaggcga taacttcacg aatattatcc
    11221 tcaccagcca ataacatgac aaagcggtcc aaaccgatag ccaatccacc gtgtggtggg
    11281 aagccgtaat ccatagcttc aagcaagaaa ccaaactgct catgcgcatc ttcagctgag
    11341 aaaccaagag ccttgaacat ccgttcttgc atgtcttttt ggttgatacg aaggctaccg
    11401 ccacccaatt cataaccatt caaaacaata tcgtaggcaa ctgcacgcac ttgcgccaaa
    11461 tcaccatcca aatgatgagc tgtttcttcc gtcggcaagg tgaatgggtg gtgggcactc
    11521 atgtagcgac cttcctcttc agaccactca aacattggcc agtctacaat ccagaggaag
    11581 ttgaacttgc tttcgtcaat caaaccttgc tcttttgcca agcggttacg caaagctccc
    11641 agggtattat tggctacttc caattcatct gctacaaaga gaaccaggtc cttgtcttca
    11701 agttgtaaac ttgctgtcaa gttagctgta atgtctgtca agaacttggc aactggacca
    11761 gctagttctc cctggtcaac tttgacccaa gctaatccct tggccccaaa ttgtttagcg
    11821 tattctgtta atttatcaat atctttacgt gagtagctat ccgccgcacc cttgaccaca
    11881 attgctttga caactggtgc ttctgagaag accttgaagt caacttcctt gacaagttct
    11941 gtcaagtctt gtaaaagcat ctcaaaacga gtatccggct tgtctgaacc atagaagttc
    12001 atcgcatggt cataggacat acgtgggaac ggtaaggtca catcaattcc tttggtatct
    12061 ttcaagacct tagcaatcaa gccttctacg atgtcttgga tttcaacctc attcaagaat
    12121 gaggtttcca agtcaacctg tgtaaactca ggttggcggt caccacgcaa atcttcatca
    12181 cggaaacact taacgatttg gtaataacgg tcgaaaccag cattcattaa aagctgctta
    12241 gtaatctgtg gactttgtgg caaagcatag aaatgacctt tggacacgcg agatggtacc
    12301 aagtagtcgc gcgcaccttc tggtgttgac ttggtcaaca ttggtgtttc cacatcgata
    12361 aattccaaat cgtccaagta gttgcgaatg ctgtgggtta cagccgcacg taatttgaag
    12421 ttgttgagca tttctggacg gcgaagatcc aaataacggt aacgaagacg agtgtcatcg
    12481 ctggcttcaa tgccgtcctt gatttcaaac ggagttgtct tagccgtgtt caacactgtc
    12541 aagctggtta cttgcagttc aacagctcct gtcgggatat tgtcgttagc ttgctcgcgc
    12601 tccacaaccg ttcctgttac ttcgataaca aactcggaac gaagactctc cgcttttgcc
    12661 atcacttcag cttcaactga ctcagggtta atcaccaatt gcataatgcc ttcacggtca
    12721 cgcaagtcaa tgaaaatcag gccacctaag tcacgacggc ggccaaccca acctttcaaa
    12781 gtaatttcct gaccgacatg ttccttacga acacgtccag catacataga acgtttcata
    12841 ttcttcctct tttactgatt ttatacctat tcattctacc ataaaataac tgatttttgg
    12901 gggaaattgc cgagaaaaat cgaaaaacca gccctagttg actggtttac ggtataacat
    12961 atccaaatgt gggatatcat cctccaaata tacttcagaa ataggttcga agccaagcga
    13021 ttgatagaat ttttccaaat aggcttgggc cccgatttta atctgacttt ccttccattc
    13081 gtttgtaatg taatggatag cttgctccat cattggccga cccaatcctt taccacgatg
    13141 gcttggcttg atgaccacac gaccgatgga aacttcatca taacttatac cagccggcaa
    13201 tattctcaaa taagccacta actccccatt gtctgttcct aaaagatgaa gacagtttgg
    13261 atcctttcca tcaatttcag gatagggaca ggcttgttcc acgacaaaca catcggtccg
    13321 aagcgtcaag atagtgtaaa gttcttgtaa actaagttgt tcaaatgttt ttatttccca
    13381 cttcatacat tcctcctagg gcagaatgtt ccctgcactt ctgtaaatct cataccattc
    13441 tggtctcgtt aaggtaatct ggctcgcttg agcaatcttt gtcaagcgtt ctggattcat
    13501 ggacccaaca atggtttgaa ttttcgctgg atgacgcaaa atccaagcta cgacaattgt
    13561 ttcatgtgaa acattgtatc gctctgctat ttccccaatg gtctgattta aaagagcata
    13621 gtcaggatgg ttggcaaaaa tacctcgttg caaatcaatc aagaaaggag accaggcttg
    13681 gatagtgatt tttttaagct ggcaataatc aatcagccca ccatcacgca tagtcgcagc
    13741 atcatctttc atattgacat gtaatccagc atcaatcaaa ggcgtgtgag caggagatag
    13801 ctgcaattga ttgactgcaa gcggttgatc gagataggat tgcaataact ccatttggta
    13861 aatgttttgg ttgctgacgc caaaatgatg aatcttccct gcttttttca agagataaaa
    13921 ggcttctgcc acttcctctg cttccattag agcatccgga cggtgtaagg cgagaacgtc
    13981 taaatattcc gtatccaagc gcttcaaaat cccatccaca gattccaaaa tatactcttt
    14041 tgagaaatca aaataacctt tacgaatgcc acattttgat tggagaagca ggtcctcacg
    14101 tttcaatccc gccaattttg ccccctgagc aaaacggatt tctgattcac caccaccata
    14161 aatatccgca tgatcaaaaa agttgattcc ctgtccaacg actgtatcta acacgttagc
    14221 tgtttcctgc ccactcaaac tagccattcg catacagcct aaagcaattc gaggaacctg
    14281 taaacctgtc tgtcctaatt cttgcatgtc tcttctcctt gtaagcgttt ttcttctatt
    14341 tattataaca gaaaaactca gccgaaactg agttttagtt aaaaccataa attcttttcg
    14401 cgattttata gacggcattg gaaatttttc gacctggata accgtaaagg ttggttaatt
    14461 gcccaagtaa ccctttacga acaattttga agagagctgg attgttatcc cgaatatagt
    14521 gccataattc ctgctttttc atcatatgct cagctgttcc tgcacgattg agaagggcac
    14581 aggagataat ggtcgtaatc tccacatgat tgagtagata actccgtaaa tcaggattgt
    14641 caatggcctc caagtctaaa ttatctacca aaattcgatt gacttttaac tgctggtcaa
    14701 tgcgcttaat catgacggat tcattgacag actggtcatt tcgcccaata aagtaacgat
    14761 aaaaatctac tggcagatag tacatcgttt tcactgcctg caaaggagta aagacaaaaa
    14821 tattatccac ataaaaagta tgctctggca gaacgagacc aacctcacgc aataaatctg
    14881 tcctgtaaat caaggaatgc atcatcatgt attgcccctt ggaaaatgcc cccacatctt
    14941 cccaaccgaa gatacgattc tcaggtagag tggattgata agacatggat tttttgcgag
    15001 attgtccctc tttttcgtaa acaaagttgg agataaaggc gtcaactggt gtattttcat
    15061 cttccaaagc ctgcaaactc tctaggatct tcaaataggc cctggtatcg acccagtcat
    15121 ctgaatctac aactttaaag tacttcccct tggcctcacg tatccctgta ttaacagctc
    15181 cgccatggcc cttattctct tgataaatag ctcgtacatt cgaaaattga ttagcaagtt
    15241 cctctgcaat ttcctgagtc cgatcggtcg acccgtcgtt aataatcaga atttcaacct
    15301 tgtcaccgcc catcacaagg gaatgaacgc agtaatgaag gtaggactct gaattgtaac
    15361 tcggaatagc aatgcttagt aaggtcatct ttctctccat ttgacacaat ttgttactat
    15421 tttatcacat tttcaggaaa gttgcttttg atattttctt tttgcttgat aggctctcca
    15481 tagttggcct aagcccttga aaaaatgacc attgacaatg gttagaatcc cttccaccat
    15541 cggtaaatcg agcatgtctc ctgtcatctt agccatagcc ctaaatggca tattataaag
    15601 gaacagcagg ttcaagtcag gagtcccttt ctgctctgct tttttcagta agccagccaa
    15661 cagtttatgc acgccacgtg ccaacccact cttagcaaat tggagtttca aaactggatc
    15721 gttcaggctc agttcttgac caattttcca ggtttcttct ggaactggac gtccaagcaa
    15781 ttgtgcaaaa tcctgctctg aaacagcctg cacttgggct gtcagataag tcggaagctg
    15841 ttctgaagca ggaaattggt ctacagtgcc ttctcgggta atctcgccaa ctaagcgaat
    15901 atcctgacta cttgcaccta catacaagag ataatttcca gcctctactt caaattgccc
    15961 tgtctcttta ttaaaataac ggaacgtata gtcctcaaaa ggaataaaaa tctgtttgga
    16021 ctcgcctgct tttacatata cttttttaaa gccttttaat tcctttgcag ggcggtaaat
    16081 ctgactatct tctttgccta cgtacaattg gacaatttca gcaccatcaa ccagaccagt
    16141 atttgtaata gtgactgtga ctcctaattc ggtcacatcc aattgactgt aagaaaagtc
    16201 tgtgtaggat aatccatagc caaagggata cttgacagtc ttgtcaaggc ttgtaaagta
    16261 acggtagcct acatagagag cttccttata gagggcaaaa tcgccttccg ctggatagtc
    16321 atccgaagat ggaacatctg caagattaat aggataggtt tcgcttagtt ttcctgatgg
    16381 gttgacacgt cctgtcaagg tatctaacat agctctggca ccagcttctc ctgatagata
    16441 gccgtgaaga actgcatcta catccacatc ccaattcata tccacaactg agcctgctga
    16501 taggacaaca acgatttttt tacctgtccc taccaaggca ttcagtaagg ataactggtt
    16561 tttagggaga cttatatgat gacgatccaa gccctcactt tcactcattt catctagccc
    16621 catatagtaa agaacaagtt ctgcttggtt tgcaagattg acagccctgt caactaacac
    16681 cctatcttct ttatctacac gttgatagcc ttgttcgtaa ccaatgacat ttaatggata
    16741 atccgcgatg caatccactg ttttatctaa ttgtcttgta ttgattaaag aagaacctgc
    16801 tccctgatag cgaggatttt gggcaaattc tccgatgagg gctatttttg tctcactaga
    16861 taagggcaag atctgatcct tattttttaa tagcacaatg ctctcagtgg cagcctgacg
    16921 ggccaattca tgttgttcag aataatctac agatcgtttt tcagcatgag ccaactctaa
    16981 aactacatca atcagttcat ccacgcgctc attcaatacc tgctcggaca gacgacctga
    17041 ctgaatagcg tcaataattt ccttttgacc gaccttttta gtacctggca tttccaaatg
    17101 actaccattt tcaacaccga gaacatggtc attggagcca ccccaatccg atacaacaaa
    17161 gcctgtaaat ccccattcgt cacgcagaat gtcacgcaag aggcgcttgt cttcattagc
    17221 atagacgccg tttattttgt tataggcaga catgattgcc tttggatttc cttcacgcac
    17281 tgcaatctca aatcctgtca gatatagctc tctcagtgta cgctcatcta caatggagtc
    17341 tgaagccata cggcgcaatt cctgactgtt tacagcaaaa tgcttaggcg ttgccgcaac
    17401 accttgcgac tgcattccac gaatcattgc ggccgccagt tttcccgctt gatatggatc
    17461 ttctgaataa tactcaaagt ttcgaccaca taagggactg cgcttaatat taagtcccgg
    17521 ccccaaaatg acattgacac ccaagctatt tgcttctgca ccgagaccct gtccgacacg
    17581 ctccactaaa tcgacatccc atgaatttgc tagggtcgca gctgtcggga agcaggtggc
    17641 aggaacagaa gcgttcagcc ctaagtgatc tccttcgcct tcttgcttgc gaataccatg
    17701 tggtccatca gacaaaaaga tagatggaat tcctttatca gggtaatcct tagtttccca
    17761 aacagatttt cctgacatga gagctgcttt ttcttccaac gttaaacgat taataatctc
    17821 ttgatgcttc atttcctgtt cctcattcat atttatttac cattatcata tcagactaca
    17881 tagataatta aaacgctttc ttcataatct gtatgatttt ggacataatc tgctatgaaa
    17941 aatctcccca gaaaattcta gggagattgt gttcatcact tcttatttca tgattacaaa
    18001 cttcatcatt ggatagttga cagccacttg aacgaaaata ttgacccagt tggccgctgt
    18061 ctgtgcccag cccaagctca agccccatga tgtaaagagc tgagtggtgt aaggcggcag
    18121 cacgatggac aaaattcctg caacgacaac agtcaagata taccaatgga gggttttgga
    18181 tatatcgttt tctgctccga ataccaactt cctttggaca atatagttga caacctgtgc
    18241 cgctatgtag gccaagagga aggagagaaa gccgttcaat ccgccatttt ctacggaata
    18301 gtgaaagata aaccagtgaa atggctgact tgacaaggct gtaaagagga aattggttga
    18361 caaccaaagg acacagaagt ttgtaatggt tgcgatgttt gataagacat taaacttgat
    18421 aaactcccac aaatctgggt gtttggcaat ccattctttc atacggtctc ctatgcaaga
    18481 caagggggaa ggcccccttg ttatgctact tctttttctt cttttttctt acctgtcaac
    18541 ttaacgagtc caagacctgt caagccgata agggcaatat tgcttgctac taaagctaca
    18601 atccaccatt ttgtttttgg tttatagatg tcaaaggctg cagaatgagc aacggtgtac
    18661 aagatatttt tgcttgcctg acgaagggct gcaacacctt cttctgtacc tgttgaggct
    18721 gctgtaggga ggcttcccat aggtgtcaac atgaggtcac cgccattgcg gatagcctgg
    18781 tctggactca tgtaatcctt acctgcaaag tctgtgatca ccatcccttt gaagccccac
    18841 tcatcacgaa ggacagtatt caagaggtcg ccgttaccac ctgcccaaag ggtaccgata
    18901 cggttgaagg aagacataat agcagttgct ccgccttctt tgacaggaat ttcaaaggct
    18961 ttcaagtaaa tttcacggat tgcctgttca ttagaccatg ttgcaacacc atcacggtta
    19021 tcttcttggt cattaagggc aaagtgtttg gtaaaggtat agacaccatt ttcaagagct
    19081 tttgctacaa gagaacttgc cattttacct gaaatcagcg gatcttctga gtagtactcg
    19141 aagttacgac ctgagaatgg tgaacggtgg atgttaactg ctggtgcata tagaccaacg
    19201 ataccgtgtg ctaaggcctc tttggcaaaa gcatcaccca tttcttctgc caagtctgtg
    19261 ttccaagtag aagcaacgac aacctctgag ttgtattgaa tacctttgat accttggaag
    19321 ataccgttga taccagcagg tccatccaag tcaacaacag ctggtttatc gattgatttg
    19381 actgctcctg ttgcataacc accaaagcca accaagttga ccatttcatc aacagacatt
    19441 tgagcaacta gtcgttccca acgctcatca tcatagtctg caccaatcaa atcaaccaaa
    19501 cgaagtccat tgtcttctgt tgtcacagta tcaatcggtg tttctgaaga ttcgtcaatg
    19561 cggaagttcg agcgatcaac ctcagcagca atttgctcac tagcctcttt atcttttgta
    19621 cgttcagttg gcaaagtact ttcccagtcc gcacgggcta catagttaac atcaccaaca
    19681 gcatattcaa aggcattggt tacctcagcc ttgtcagatg aacgttgttt caagacttcc
    19741 ttgctgtcaa cagtgtaggt ttctgaatcc aaaacatcat gagcgttatt catgagtttg
    19801 atttggtagt caccttcatc caagacatag gctttttcag tcttttcgtc gtaagatgcc
    19861 atatcatcac ggtcgaagga aatggtcatt tcttcgctct gacctgggtc aaggacttca
    19921 gtcttatcaa atccagctaa aacaacgtgt gatttctcaa caccaccttc tgtatatgga
    19981 gcagtgtaat aaacttgtgc aacttcttta ccagccacat caccagtgtt ggttaccttg
    20041 acattgacct caatcttgtc accattttct ttcatgctgg tgatttcttg gtcaaatttt
    20101 gtatagctca aaccgtagcc aaatggatat tgcactgttg catcgtaggc tgcctcatct
    20161 acttgaccag tcgcattgtc aataaagcga gtttcatagt aacgatatcc tagatagatg
    20221 ccttcttggt agttaacaaa tttgtagtta aaggtctgag gctcttttgc tccccatgga
    20281 gtatcttcat aagtaatatt tgtataagag aagtcacctg tattccagta ggttggattg
    20341 cttttcaagt cgtaagcgta ggtatcgacc aagcgaccag atgggttgac ctcccctgcc
    20401 aagatattgg ctacaccagt caagccggtt gagccaggac caccaatcca tagagctgca
    20461 tcgacacctg catcttccaa gaatccaagc tccatagcat ttgaagagtt gactaagaca
    20521 acaaccttat caaagttttc ggttacagtt ttcaacatgg ctttttcaac ttcttggagt
    20581 tcaaggtagt gcttatcctt gtcaccttgt tggtattctg ccatgttttg tggaaggtcc
    20641 gccccttcac caccattacg ggaaataact actaaggctg tatcagagaa gttcttagca
    20701 tttgctagca gttcctctga gtatttatct tgagttggct cgtagatatt gtaatctcca
    20761 ccattgaggg agaaaatatt tgtcccttct ttttctggaa ggttttctat gtagaagtct
    20821 gtcaattcgc tgttgacttc aaaacctgca ttttcaagac cttgttgcag attgatgttt
    20881 ttggactcat ctgccgcacc tgaaccagat ccaccgtaag taatggctac agaagaaata
    20941 ccaaagacat tgaccttgga tgatttttca agtggtaggg tcttattctt gttttcaagc
    21001 aagacagtac cttcttcttg aatggtcgtt accaaggact tagaaacttc ttctgcatca
    21061 gcaattttag cagcatctgc ataagatgga gcaaaatatg tgtcaatcac attgacaaac
    21121 atattgacag catagttagc tccaacgata atgatactca agagagccaa gaggctaaag
    21181 cccaactttt tcttcttgct agagagggat ttttccttca ctacgcgata aatcgcaaat
    21241 cccaataggc caaggacaac tacagcagaa cagataaata ctgtttttac aatcccgacc
    21301 gcatcccatg attgatagct acttggatag ctatctgcat agactgtttt tcctgatagc
    21361 agagctcctg ctaggctcaa gagagcccct ttctttttcc aagccttcat aagacttcct
    21421 cctaaacgtt tcggctttca tgtaagcctt ttctttttct tgaatccact atatcaatta
    21481 acatactcaa tgaaaaccct ttcttcataa tctgtcattt aaccttcata atttgtaaat
    21541 ttacaagaat aatcctactc ttgctatttt atcatttgat tttctaaaat atagctaaca
    21601 atttcatttt aattttgata tactgataga aaataaaagg ggggctttat gaaaatcgcg
    21661 attgtagaag atcaaaaaat tgagcaagat agattgtcca actacatcaa aacctactgc
    21721 caagaagctg ggattgccgt ggaaatcagc tgttttaatg acggtctcca tatcactagt
    21781 gactatcaaa aacaatttga cctgatttac ctagatgttg agatggaaat tatggacggg
    21841 atgaccaccg ctcaaaaaat tcggtctgtg gacaaagagg ttctattagt atttgtgacc
    21901 aatcattctc acgtagcgat tcaagggtat tcagttgaag ctattgattt tctgctcaag
    21961 ccactgcgtt cttttgtctt tgaggaacat tttaaaaaaa ttcttagaaa attacccgat
    22021 agccaagaga aacaaagttt atatattaaa agcaagcagt ccaccgtaaa actctatcaa
    22081 gaagatattg tttacctaga aagtcaagga catcaggttt acatctacac agttgacggt
    22141 ggcctaacga ttacccataa tagtctcaag aatctcgaag ccatgttaga cagtaaagtg
    22201 tttgtacgag cccattcagc ttatatcatc aatctttccc atgttcaaaa agtggaaggt
    22261 agcctagttt acgtcacaaa tacagccttg ccaattagcc gcccaaggaa aagagaattt
    22321 atgacagctc taaccaactt catcggagat agcctactat gatcaatttc cctgatattc
    22381 cacgtttcta tactgctcta acagaaagct tggcctgcct agtggtctgt tcctcacttg
    22441 ttttgtctga aaaatgggca cgcaaacagt tccgtatcct cctgattttc ctcatacaaa
    22501 tcttacttca acttgtggct ggtaaactcc ctttgctttt ttggactgtg ggaatgggca
    22561 tcaatatcgc ttggatgttt gtttctattc gattgcttgg agttatccac aagaggacca
    22621 gtctctattt gacagcaaaa gcctttatca ttgccgaatt agtagcctcc attacttggc
    22681 atctctactg tttgacgatt tatcaacaac ctgtggataa cttgtggaca caggggttat
    22741 ttctgttgat aacttctcta ctttcctatt ggctcatcta tcttcaagat caaaaagttc
    22801 gcttagaaga attggataaa ttcattgagc agcgagatgt gacggtagcc gtctttacaa
    22861 ctttatctat ctttgttctc agtaatattg gtttcatcct ctcaggcacg cgccaatttc
    22921 aagactcgac cagcattttc atcctccgga caaccgtcaa tctctctggt cttctgctcc
    22981 tattcaccca agaatcacaa caatacgatc gctatttacg gcaggagttg acttcaatca
    23041 ataatatctt tcaacttcaa tacaagcaat atcaagccta tcgtgaaaac agtgagattc
    23101 ttgaccgtaa agtccatgat ttaaagcatc aactgaccat catccaacaa gaatcggata
    23161 aaaccaaaaa ggagcaatac ctagaggaaa tgagcgaggt gatccaaacc cttgatgcca
    23221 agattgaaac aggaaatcct gttctagata ccattctcag ccagaaaaat tattactgtt
    23281 tgcaaaatgg aatcaacttt acctgtattg ttcagggaga acccctccat tttatggatg
    23341 taatggatat ttcagctctg tttggaaatg ccattgacaa tgccatcgag gctgtggaaa
    23401 aaatagacaa tcctgaacaa cgcttgatta ctttaaaggt tgcctgccat cagcaatttc
    23461 tcatcattcg attggataat tatgacactt cttcacttga cttatccaca ggacagctcc
    23521 ctgcaacctc aaaagcaaat aaggactacc acggattcgg tcttaagagt atggagtatg
    23581 ttgccaataa atacggtggc agtctcacac ttagcaagga agataattgg gttcaactaa
    23641 aaatcattct ccctttacaa gcatagaggg agtgggatag aactcgacta gtc
//
LOCUS       DBNFCX010000028        23625 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.028, whole genome shotgun sequence.
ACCESSION   DBNFCX010000028 DBNFCX010000000
VERSION     DBNFCX010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 23625)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23625)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23625
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.028"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            324..1520
                     /gene="tuf"
                     /locus_tag="AC1PJC_000960"
     CDS             324..1520
                     /gene="tuf"
                     /locus_tag="AC1PJC_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014335040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HIP6619957.1"
                     /translation="MAKEKYDRSKPHVNIGTIGHVDHGKTTLTAAITTVLARRLPSSV
                     NQPKDYASIDAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQM
                     DGAILVVASTDGPMPQTREHILLSRQVGVKHLIVFMNKVDLVDDEELLELVEMEIRDL
                     LSEYDFPGDDLPVIQGSALKALEGDSKYEDIVMELMNTVDEYIPEPERDTDKPLLLPV
                     EDVFSITGRGTVASGRIDRGTVRVNDEIEIVGLQEEKSKAVVTGVEMFRKQLDEGLAG
                     DNVGVLLRGVQRDEIERGQVISKPGSINPHTKFKGEVYILTKEEGGRHTPFFDNYRPQ
                     FYFRTTDVTGSIKLPEGTEMVMPGDNVTIDVELIHPIAVEQGTTFSIREGGRTVGSGM
                     VTEIEA"
     gene            1695..2447
                     /gene="tpiA"
                     /locus_tag="AC1PJC_000961"
     CDS             1695..2447
                     /gene="tpiA"
                     /locus_tag="AC1PJC_000961"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HIP6619958.1"
                     /translation="MSRKPIIAGNWKMNKNPQEAQAFVEAIAGKLPAGDKIEAAIAAP
                     AVDLNALLWFAKDSELKVAAQNCYFEDAGAFTGETSPKVLAEMGVNYVVIGHSERRDY
                     FHETDEDINKKAHAIFRNGLTPIICCGESLETYEAGKAVEFVGAQVSAALKDLTAEQV
                     ASLVIAYEPIWAIGTGKSATKDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVNPS
                     NVAEYMACPDVDGALVGGASLEAESFLALLNF"
     gene            complement(2501..3310)
                     /gene="yidA"
                     /locus_tag="AC1PJC_000962"
     CDS             complement(2501..3310)
                     /gene="yidA"
                     /locus_tag="AC1PJC_000962"
                     /EC_number="3.1.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015604638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-phosphatase"
                     /protein_id="HIP6619959.1"
                     /translation="MSIKLVAIDIDGTLLNSQHQITAEVHSAIQEAKKAGVKIVIATG
                     RPISGVQAILEELNLTEAGDYVITFNGGLVQDAATGDDIVKDTLTYEDYLDIESAARK
                     LKLPMHASTKEGIYTANRNIGKYTIYESTLVSAPIFYRTPEEMADKEIIKTMMVDEPE
                     ILDAAIPLLPTSLTEKYNVAKSAPFYLEITPKTVNKGQAIIHLAEKLGLTMDQTMAIG
                     DQENDRPMLEVVGNPVVMENGNPELKKIAKYITKSNDESGVAHALREWVLK"
     gene            complement(3300..4613)
                     /locus_tag="AC1PJC_000963"
     CDS             complement(3300..4613)
                     /locus_tag="AC1PJC_000963"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HIP6619960.1"
                     /translation="MIEKVFRDPVHNYVHVDHELIYKLINTKEFQRLRRIKQLGTTSY
                     TFHGGEHSRFSHCLGAYEIARRITQKFEDKYPQIWDTNESLLTMVAALLHDVGHGAYS
                     HTFERLFDTDHEEMTCAIITSPETEINALLKQVSPEFPDKVASVIKHTYPNKQVVQLI
                     SSQIDVDRMDYLLRDSYFTGANYGEFDLTRILRVIRPTENGIAFKESGMHAVEDYVLS
                     RYQMYMQVYFHPASRSMEVLLQNLLNRAKLLYTGEQEFFARTSPRLLPFFEHRIRLTD
                     YLSLDDGVMNTYFQSWIDGPDRILSDLAQRYINRKVLKSITFKAEEEEALDRLRSLVA
                     DVGFDPEYYTAIHHNFDLPYDIYRPNAEKKRTQIEIYRKDETLVELSSLSPIVHSLSG
                     TIHGDSRFYFPKEMLEETGIFAPQIADFNSHIHNDHFIIGESNEH"
     gene            4712..5599
                     /locus_tag="AC1PJC_000964"
     CDS             4712..5599
                     /locus_tag="AC1PJC_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HIP6619961.1"
                     /translation="MNNQIILLTIQVFIVALILWMLYTILSYAKKHDISLKEKFWTGF
                     GIGYVTDLLDTLGIGTFATTTTMFKLTKLVEDDRKIPATMTTAHIIPVLVEALLFITI
                     VEVDMVTLIAMAAAAFTGAFVGAKVTQKWDTKKVQRILGILLIIAACFMVYRMITNPG
                     ADLTNEVKGLTGWKLAVGIAFDFMVGMLMSMGLGNYAPELIFFSLMGISPAVALPVMM
                     LNAAMIMTAGAKQFIQSGRVNWPGVPGIIVGGVLGVLTAAFFLSNLDINNLKILVVFI
                     AAYTGFTLLRSSFVTRIKK"
     gene            5611..5997
                     /locus_tag="AC1PJC_000965"
     CDS             5611..5997
                     /locus_tag="AC1PJC_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1934 domain-containing protein"
                     /protein_id="HIP6619962.1"
                     /translation="MDIHLRNEIDLDGQIEVVDQQFQVEVKEKDGNLYLIYSNDEAEK
                     VVIKCDEEELVMTRFSTPKSIMRFISGKEAIVTIPTPLGIQHFVTDTKRYQLNRSDQS
                     VQLQYELKGLENQQLFASYNLEISWK"
     gene            6472..9159
                     /locus_tag="AC1PJC_000966"
     CDS             6472..9159
                     /locus_tag="AC1PJC_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010922034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015662 - P-type ion transporter activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation-translocating P-type ATPase"
                     /protein_id="HIP6619963.1"
                     /translation="MSKEQKRDLFYTQSEEQVLSSMGSSLDGLSSEEASKRLADYGRN
                     ELDEGEKRTLLAKFLDQFKDLMIIILIAAAILTVITEGSHGLTDAIIILAVVILNAAF
                     GVYQEGQAEAAIEALKNMSSPVARALRDNHVVEVDSKDLVPGDIVLLEAGDVVPADMR
                     LLEANSLKIEEAALTGESVPVDKDLSAVLAEDAPIGDRVNMAYQNSNVTYGRGLGVVT
                     NTGMYTEVGHIAGMLANADETDTPLKQNLHQLSKVLTYAVLVIAAVTMAVSVFVRGEG
                     ILPALMTSVALAVAAIPEGLPAIVTVVLSLGTQVLAKRNSIIRKLPAVETLGSTEIIA
                     SDKTGTLTMNQMTVEKVYTNGQLVDAKEALDASNTTLRVMNFANDTKVDPTGKLIGDP
                     TETALVQFGLDQNFDVREVLVSEPRVAELPFDSTRKLMSTVHQQAAGNFFVAVKGAPD
                     QLLKRVTQIEENGTIRPITDADKQAILATNKELAKQALRVLMMAYKYVDAIPELESDV
                     VENDLVFSGLVGMIDPERPEAAEAVRVAKEAGIRPIMITGDHQDTAEAIAKRLGIIDP
                     NDTEDHVFTGAELNELTDEEFQKVFKQYSVYARVSPEHKVRIVKAWQNDGKVVAMTGD
                     GVNDAPSLKTADIGIGMGITGTEVSKGASDMVLADDNFATIIVAVEEGRKVFSNIQKT
                     IQYLLSANTAEVLCIFLATLFGWDVLEPVHLLWINLVTDTLPAIALGVEPAEPGVMQH
                     KPRGRNSSFFSGGVLSSIIYQGILQTALVLGVYGFALLYPEHAGDNHAIHADALTMAY
                     VTLGLIQLVHAFNVKSVYQSIFTVGPFKNKLFNWSIVAAFLLLMATVVIPGFNTFFKV
                     SILTPTQWMVTVIGSGLMVVVVEIVKFVQRKMGLDEKAI"
     gene            complement(9285..9674)
                     /locus_tag="AC1PJC_000967"
     CDS             complement(9285..9674)
                     /locus_tag="AC1PJC_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6619964.1"
                     /translation="MRVIIHYPKPIKQLSSQKLPLLVDGKIAGTVTQGKILSLPITQP
                     SVTLSIRGDKKSAIQVKEGDRVQIMENSRYFILYYFSLAIVPIALLFNLPTLVKTILL
                     ILALAITLLGQAIFPKYIISTEKSSDH"
     gene            9808..10224
                     /locus_tag="AC1PJC_000968"
     CDS             9808..10224
                     /locus_tag="AC1PJC_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001540 - amyloid-beta binding [Evidence
                     IEA];
                     GO_function: GO:0004930 - G protein-coupled receptor
                     activity [Evidence IEA];
                     GO_process: GO:0097190 - apoptotic signaling pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="HIP6619965.1"
                     /translation="MNYLQNYILSKSSYLPSDKLFILQKELEDLDDEALNVVMMVEMR
                     QPLVALILAIFFGEFGVDRFYVGNKELGFAKLIAFAVSFVTLFILIGFLLFFGLYLWK
                     FIDCFLIMRACKEANFERLMLQIHQYKAFQHSNQTF"
     gene            10394..10882
                     /locus_tag="AC1PJC_000969"
     CDS             10394..10882
                     /locus_tag="AC1PJC_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA];
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HIP6619966.1"
                     /translation="MQTKKMSMFLFFAYLLLLTWMIVFKMDLSIVYGRYGYASINLIP
                     FAGTAVYDGVLDFPEILFNIVSFIPFGIYMEMLFRKASWVANLCLIMLVSLCFEVLQY
                     LLLLGVADITDLLANGLGGAIGINIMYVLTSIWREKAYVRMNIFCFVLTFFVILITYL
                     AM"
     gene            10923..12050
                     /gene="queG"
                     /locus_tag="AC1PJC_000970"
     CDS             10923..12050
                     /gene="queG"
                     /locus_tag="AC1PJC_000970"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0052693 - epoxyqueuosine reductase
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HIP6619967.1"
                     /translation="MNIKEEIIKLSQEIGISKIGFTTADDFAYLEKSLRASQEEGRSS
                     GFEHKNIEERIRPKLSLESAKTIISIAVAYPRHLPVKPQKTQYKRGKITPSSWGLDYH
                     YILQDKMERLARGIEKLMDGLEYKAMVDTGALVDTAVARRAGIGFIGKNGLVISKEFG
                     SYMFLGELVTNLDIEPDQPVDYDCGDCNRCVAACPTSCLLGDTTMNARRCLSFQTQDK
                     GMMDLEFRKKIKTVIYGCDICQICCPYNKGISSPPVVEIDPELAEPELIPFLDLSNGQ
                     FKEKFGMIAGSWRGKNILQRNAIIALANSNDRSAIPKLLEIIDKKQNPIHMATAIWAL
                     GQLVKQPNDEMVSFIAGISSDNDDVIAEQTAFLNMVKDLQM"
     gene            12085..13180
                     /gene="prfB"
                     /locus_tag="AC1PJC_000971"
     CDS             join(12085..12156,12158..13180)
                     /gene="prfB"
                     /locus_tag="AC1PJC_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775232.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HIP6619968.1"
                     /translation="MDTAEIRQKIEELGKKLTSFRGSLDLEGLEEEIAILENKMTEPD
                     FWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDFLAEDESVRDELVEKLAE
                     LDKTMTAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKGFTV
                     ETLDYQAGDEAGIKSVTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVE
                     VMPELDDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRT
                     QYGNRDRAMKLLQAKLYQLEQERKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDH
                     RTGYEVAQVDKVMDGDLDGFIDAYLKWRIS"
     gene            13323..14015
                     /gene="ftsE"
                     /locus_tag="AC1PJC_000972"
     CDS             13323..14015
                     /gene="ftsE"
                     /locus_tag="AC1PJC_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012130521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HIP6619969.1"
                     /translation="MGIIEMKDVSKKYGNGTTALRGVSVNVEAGEFTYIVGPSGAGKS
                     TFIKLLYREEKLDKGSLKVGKFDLAKIKKRDVPLLRRSVGVVFQDYKLLPKKTVFENI
                     AYAMEVIGEKPRNIKKRVMEVLDLVGLKHKIRSFPNELSGGEQQRIAIARAIVNNPKV
                     LIADEPTGNLDPENSWEIMNLLERINLQGTTVLMATHNSQIVNTLRHRVIAIEDGRVV
                     RDEEQGEYGYDD"
     gene            14008..14937
                     /gene="ftsX"
                     /locus_tag="AC1PJC_000973"
     CDS             14008..14937
                     /gene="ftsX"
                     /locus_tag="AC1PJC_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016398914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="permease-like cell division protein FtsX"
                     /protein_id="HIP6619970.1"
                     /translation="MIRRFFRHFIESLKSLKRNGWMTIAAISSVAITLTLVGLFASVI
                     LNTAKLASDLEQNVRINVYLRANSTDQAETIVNEAGETVANPDYQKVYNQITAIENVQ
                     SVTYSSKDEQLQKLTATLGDTWNLFQGDANPLYDAYIIDTTDPNYVKSVAAEIAKIDG
                     VTEVRDGEVETERIFKLADLVRTWGLAATGLLLFTAVFLISNTIRITIISRSREIQIM
                     RLVGAKNSYIRGPFLWEGAWVGFLGAILPSVLVYSLYKMIYTSVNASLASQDLSLISM
                     NVFVPGMIGALFVIGIIIGSLGSVISMNRYLKI"
     gene            complement(15151..17286)
                     /gene="feoB"
                     /locus_tag="AC1PJC_000974"
     CDS             complement(15151..17286)
                     /gene="feoB"
                     /locus_tag="AC1PJC_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0015093 - ferrous iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HIP6619971.1"
                     /translation="MTKHIALAGNPNSGKTTLFNLLTGTNQRVGNWPGVTVERKSGTI
                     KKRKHLLIQDLPGIYSLSPYTPEERVARDYLIADQPAAILNVLDATNLERNLYLTLQL
                     LEMGLPIVIALNMTDALKSQGRTINSDQLSYQLGVPVQPISALKKLGISQLLHEVEKI
                     ANQQAEPIYPQYDKQFEAGLAQVIDLLSDSIPNHQKRFYAIKLLEQDQVILDQLQLNA
                     QDMLDLTEIIAILEKIYADDMEAIIVNQRYQFIEKITELVTKDSDKTFNLSDNIDRLV
                     TNRFLALPIFAAVMWLTYFLSIQTVGTMGTDWVNDVLFGELVPGLIQANLDRFEIAGW
                     LQSLVLDGIIAGCGAILGFVPQIFVLFVCLGILEDIGYMSRVAFVMDRIFRRFGLSGK
                     SFIPMLISTGCGVPGVMASRTIENEQDRKITIMTATFMPCSAKLPIISLVAGAFFPDN
                     PWIAPSAYFVGMAAIVLSGMALKKTKQLGGVASPFIMELPSYHLPKLSTVLRYAFDKA
                     LSFIKRAGTIIFVTNIIIWFSSSYNWSLQMVETDESILASIGRSFSLLFAPLGFGNWR
                     ATVAAITGLLAKETVIATFGILYKLGETTEENPELWGLLQQDYTALSAYSFLVFNLLC
                     APCFAAIGAIHREMGEAKWTWIAIGFQTGLAYASSLVIYQIGLVLIYGQLPTVWTFIA
                     IFLIITAIYSLVKKPANTLPIVTLKTLEK"
     gene            complement(17283..17753)
                     /locus_tag="AC1PJC_000975"
     CDS             complement(17283..17753)
                     /locus_tag="AC1PJC_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046914 - transition metal ion binding
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FeoA family protein"
                     /protein_id="HIP6619972.1"
                     /translation="MKLQNLQVGQSYLVKDCLTQDDIRKHLAHLGLKVGEEIRIISKT
                     KTNAIFQVKASRLALDREIIESLVLIEKSATEIINLSEAPIGSSAKVMDIYATGALRR
                     RLMDMGLTKNAQLFLKKVAPLGDPIEITLRGYELTLRKSEAQMIGVQITSEVRK"
     gene            17910..17982
                     /locus_tag="AC1PJC_000976"
     tRNA            17910..17982
                     /locus_tag="AC1PJC_000976"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:17943..17945,aa:Thr,seq:ggt)
     gene            18551..20278
                     /locus_tag="AC1PJC_000977"
     CDS             18551..20278
                     /locus_tag="AC1PJC_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6619973.1"
                     /translation="MFRLIFDYIKRHKWLYLLVAVTLIIYDATLLLPTQIIQRMVDIL
                     TKNELTQAILVQEMTLLLLVTVLNYATAFIWHLKLFQASVNFKFDMQQRAFKKLVTMR
                     TPFYEKFRSGDVMTRFSTDVDGLMEMVGYGLMIVVYAGGMLAFIIPTMFFIDWKISLV
                     ALLPMLFMTLCIFFIGRKQDKAIDANREAVAQLNNEVLEVIEGIRVTRAYSKKANQKA
                     QFQARTKQLAQGGDRITSLQSLYNPLATVCLGLSTIFVLLMGAQAVKAGQLTLGQVIA
                     LQLYVGSLLEPFWTLADFILVYQTGKTSFEKLQELIETGDDLEADGSKEIAELSSISF
                     KNYSFSYPQAERASLQDINWTLKAGQTVGIVGKTGSGKTTLVRQFLRQYPIGQGNFFI
                     NHQSVLDFKRSSIEEKIGYVPQEHILFSRSVGENIALGKVVSSSEEIEQAIATAAFSQ
                     DLKRMTDGLDTMIGERGVSISGGQKQRISIARAFLREPDLLILDDSLSAVDARTERQI
                     IQNIQKERAGKTNVIVTHRLSAVNHADWVLVLDEGRIVEEGRPADLLAQRGWYYEQYQ
                     RQQSQEGGE"
     gene            20278..22017
                     /locus_tag="AC1PJC_000978"
     CDS             20278..22017
                     /locus_tag="AC1PJC_000978"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6619974.1"
                     /translation="MTILGFLLKQIGRVKWLFIVAVGFYLLASTMVRLAPLLIQQAID
                     GPITDLSKGLPFDEAVFLNQSAQYMGMIILGAIGFYLSMRLLMHCANRIAENLRNQAY
                     DVMQRLPISYFDDKPAGKIATRIVNDTETLRTQFYGTLVNAFNNIVRLLFTYGVLFYM
                     NRSLGWLMLLLIPLYIGIQFAYKKMTDKPMKDFYDARSDVNTQVNETMNGASLIQLFG
                     QEERIMKEFEVTADKMRRADNKIIWAQSLATWNLSGFLQNLVIAAILTVVGYQFLAGQ
                     DGVTAGKLFVYVNYIEGVFIALGALVQQFPNMLRSFETGKRLMALLEEEVEDDCDRIL
                     EVEQGQVVFEHVNFSYEENRPVLKDITIRAEKGETVALVGHTGSGKSSIMNLLYRFYD
                     PQEGRVLIDGKNIRDYSRESLRSHMGIVLQDPYLFTGTIASNVSMNEEEADRTRIMQA
                     LEKVGAGPMLSRLEKGIDEPVVEKGAAFSSGERQLIAFARTLYSDPKILILDEATSHI
                     DTETEEIIQHAMEVVKEGRTTFIIAHRLSTIQNADQILVLDQGRIIEHGKHEELVAHG
                     GVYAQMHEIQAKV"
     gene            22071..22766
                     /locus_tag="AC1PJC_000979"
     CDS             22071..22766
                     /locus_tag="AC1PJC_000979"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HIP6619975.1"
                     /translation="MKALIFDVDDTLYDQIQPFERALERHIEVAREQIEPLYLSFRRY
                     ADEVFEATAIGKMSLKDSYIYRMKHALADFGYQVSDAAALAIQIDYDYFQGQIELSPV
                     FPEIFSWCQAQGIAMGIITNGPYRHQLRKIRTMGLVNWFELEHVLISGQVGITKPNPA
                     IFQLMEERLGLSGEDICYLGDSFENDVVGAKAANWKAIWFNHRKRVEPTAPYQADKVV
                     TDWDELVEVIQSF"
     gene            22932..23489
                     /locus_tag="AC1PJC_000980"
     CDS             22932..23489
                     /locus_tag="AC1PJC_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HIP6619976.1"
                     /translation="MTQAFFPIHTLETVSPELRENLATVKKNNGGYIPNLIGLLANSP
                     TALETYQTVSGINRRSSLNPMEREVVQITAAVANGCGFCVAGHTAISIKQVKMPDVIL
                     QALRQGTPIETDAKLDALARFTLAVIHEKGKVEQPLLEEFFQEGYTAENALDVVLGVS
                     LATLCNYANNLINTPINPELQAYAL"
BASE COUNT         6732 a         4273 c         5417 g         7203 t
ORIGIN      
        1 agcaagaggc ttgtcaggga gtcgtagggt aattgaatgg agaaaggtct gtcgcagtag
       61 tctcgtattt gtggtacctt gtagctatgg taacatcaat attcctatgg aagtgaggtg
      121 tttttagttg agtaataggt taaaatggga tgataaaaaa agttataagc gaagctaata
      181 gtccttgcag aaaatggata aaataaaaaa cgatagaaaa tgcttgcaat tctgctacaa
      241 tttgatagaa tagtaaggta aagttagact gtattgccta ctgtctatct ataaaatata
      301 ttttattgga ggcttttacc aaaatggcaa aagaaaaata cgatcgtagt aaaccacacg
      361 ttaacattgg tacaattgga cacgttgacc acggtaaaac tactttgaca gcagctatca
      421 caactgtatt ggcacgtcgc ttgccttcat cagttaacca acctaaagac tatgcgtcta
      481 tcgatgctgc tccagaagag cgcgagcgcg gtatcactat caacactgca cacgttgagt
      541 acgaaactga aaaacgtcac tatgctcaca tcgacgctcc aggacacgcg gactacgtta
      601 aaaacatgat cactggtgct gctcagatgg acggtgcgat ccttgtagta gcttcaactg
      661 acggtccaat gccacaaact cgtgagcaca tccttctttc acgtcaggtt ggtgttaaac
      721 accttatcgt cttcatgaac aaagttgact tggttgacga tgaagaattg cttgagttgg
      781 ttgaaatgga aatccgtgac cttctttcag aatacgattt cccaggtgat gatcttccag
      841 ttatccaagg ttcagctctt aaagctcttg aaggtgactc taagtacgaa gacatcgtta
      901 tggaattgat gaacactgtt gatgagtaca ttccagaacc agaacgcgac actgacaaac
      961 cattgttgct tccagtcgag gacgtattct caatcactgg tcgtggtact gtagcttcag
     1021 gacgtatcga ccgtggtact gttcgtgtca acgacgaaat cgaaatcgtt ggtcttcaag
     1081 aagaaaaatc taaagcagtt gttactggtg ttgaaatgtt ccgtaaacaa cttgacgaag
     1141 gtcttgccgg cgataacgtt ggtgtgcttc ttcgtggtgt acaacgtgat gaaatcgaac
     1201 gtggtcaagt tatctctaaa ccaggttcta tcaacccaca cactaaattc aaaggtgaag
     1261 tttacatcct tactaaagaa gaaggtggac gtcacactcc attcttcgac aactaccgtc
     1321 cacagttcta cttccgtaca actgacgtaa ctggttcaat caaattgcca gaaggtactg
     1381 aaatggtaat gcctggtgat aacgttacta tcgacgttga attgatccac ccaatcgccg
     1441 ttgaacaagg tactactttc tctatccgtg aaggtggacg tactgttggt tcaggtatgg
     1501 ttacagaaat cgaagcttaa ttcgattgag ttcccagaaa taacaattat agtcagacaa
     1561 cttaattgta actctctact ttcgggtaga gagtttttct gtaagtattc ataaaatgca
     1621 cagaaattct ttaatcttag ctaagtttat gctataatgt accttgtaca ataaatatag
     1681 aagaggtaag tgaaatgtca cgtaaaccaa tcattgccgg taactggaaa atgaacaaaa
     1741 atcctcaaga agcacaagca ttcgttgagg ctattgcagg aaaattgcct gcaggcgaca
     1801 aaattgaagc agctatcgca gcaccagctg tagatttgaa tgctttgttg tggttcgcta
     1861 aagattctga attgaaagtt gctgctcaaa actgctactt tgaagatgct ggtgccttca
     1921 ctggtgaaac atctccaaaa gtattggctg aaatgggtgt taactatgtt gttatcggtc
     1981 actcagagcg tcgtgattac ttccacgaaa ctgatgaaga tattaataaa aaagctcatg
     2041 caatcttccg taacggtttg actccaatca tctgttgtgg tgagtcactt gaaacttacg
     2101 aagctggtaa agcagttgaa ttcgtaggtg ctcaagtttc tgcagctttg aaagacttga
     2161 ctgctgagca agtagcatca cttgttattg cttatgagcc aatctgggca atcggtactg
     2221 gtaaatcagc tactaaagat gatgcacaaa acatgtgtaa agctgttcgt gacgttgttg
     2281 ctgctgattt cggtcaagaa gttgcagaca aagttcgcgt tcaatacggt ggttctgtaa
     2341 acccatcaaa cgttgctgaa tacatggcat gtccagacgt tgacggtgca cttgttggtg
     2401 gtgcatcact tgaagcagaa agcttcttgg ctttgttgaa cttctaataa caaaaagcat
     2461 cggattttga attcgatgct ttttttgata ttttaagagg ctatttcagt acccattctc
     2521 taagagcgtg ggctacaccg ctctcatcat ttgacttcgt aatgtatttg gcgattttct
     2581 tcaattcagg atttccgttt tccatgacaa caggattacc aacaacttcc aacattggac
     2641 ggtcattttc ttggtcaccg atggccatgg tttgatccat tgttagtcca agtttctcag
     2701 ctagatgaat gatagcttgt cccttgttaa cagttttagg ggtgatttcc aaataaaatg
     2761 gtgctgattt tgctacgttg tacttctcag tcaagctggt cggtagaagt ggaatagcag
     2821 catcaagaat ttctggctca tcaaccatca ttgttttgat gatttccttg tcagccattt
     2881 cttcaggagt gcgatagaaa atgggtgcac ttactagtgt ggattcgtaa atggtgtatt
     2941 taccgatgtt acggttggca gtatagatac cttccttggt gctggcatgc attgggagct
     3001 tgagtttacg ggcagcagat tcgatgtcga gataatcctc ataagtcaag gtatctttga
     3061 caatatcatc accagttgct gcatcttgga ctaagccacc gttaaaagtg atgacgtagt
     3121 cacctgcttc tgtaagattg agttcttcta aaattgcttg aacaccggaa atggggcgac
     3181 cagtagcaat aacaatttta acacctgctt tttttgcttc ttggattgct gagtgtactt
     3241 cagctgtaat ttggtgttga ctatttagta gtgtaccatc aatatcgatg gcgacaagtt
     3301 taatgctcat ttgattctcc aattataaaa tgatcgttat gtatgtggct gttaaaatca
     3361 gctatttgag gtgcgaaaat tcctgtttct tctaacattt cttttgggaa atagaagcgg
     3421 ctatcgccat ggattgtgcc tgataaggaa tggacaattg gtgatagaga ggatagttct
     3481 accaaggttt catctttgcg ataaatctca atttgagtcc gtttcttttc tgcattcggt
     3541 cggtaaatgt catacggcaa atcaaagttg tggtgaatag cagtatagta ttctggatca
     3601 aacccgacat ctgcgaccag gctacgcagg cggtccaaag cttcctcttc ttcggccttg
     3661 aaagtgatgg atttgagcac tttcctattg atatagcgct gggccaagtc agataatata
     3721 cgatctggtc catctatcca tgattgaaag taagtattca taactccatc atcaagactg
     3781 aggtagtcgg ttagacggat acgatgctca aaaaaaggta atagccgagg tgaagttcgt
     3841 gcaaaaaact cctgttcacc agtatatagt agtttggcac gattgagtaa attctgcaat
     3901 aggacttcca tagagcggct tgctggatga aaatagactt gcatgtacat ctggtagcgg
     3961 ctgagaacgt agtcttctac tgcatgcata ccagattctt tgaaggcaat tccattttct
     4021 gtcgggcgaa tgacacgtaa tatcctagtt aggtcaaatt caccatagtt cgcacctgtg
     4081 aagtaggaat ctcgtaatag ataatccatc cggtcaacat caatctggct cgaaatgagt
     4141 tgaacgacct gtttatttgg ataggtgtgt ttgataacac tagcaacctt gtctggaaac
     4201 tcaggtgaaa cttgtttcaa cagagcattg atttccgttt ctggactagt aataatagca
     4261 caggtcattt cctcatggtc tgtatcaaat agacgctcga aggtatgaga ataggctccg
     4321 tgtccgacat catggagtag cgcagcaacc atggtcagta gggactcatt tgtatcccag
     4381 atttgtggat acttgtcttc aaatttttga gtaatccgtc tggcgatttc gtaggcgccg
     4441 aggcagtgcg aaaagcggct atgctcgcca ccatggaagg tataggaagt agtccctagt
     4501 tgcttgatgc ggcgtagtcg ctgaaattct tttgtattga taagtttata aatcagctca
     4561 tgatcaacat gtacatagtt atgaactgga tcgcgaaata ctttttctat catagtttca
     4621 ttataacaaa aaagggagat aaattcctga tttttctaaa acacaaggat attgctatgt
     4681 acccaatgga atcttttggt ataatggaga aatgaataat caaattatct tattaacaat
     4741 tcaggtcttt attgtagccc tgattctttg gatgctttac acaattctat cctatgctaa
     4801 aaagcatgat atttctctaa aagagaaatt ttggacagga tttggtatcg gttatgttac
     4861 tgatttgcta gacaccttgg ggattggaac ctttgcaacg acaaccacta tgtttaaact
     4921 gacaaagttg gtggaagacg atcgtaaaat tcctgcgacc atgacaacgg cgcacatcat
     4981 accagtctta gtagaggcgc tattgtttat tacgatagtt gaggttgata tggtaactct
     5041 gattgctatg gcagcagcgg catttacggg tgcctttgtt ggtgccaagg taactcaaaa
     5101 atgggataca aagaaagttc aacgaattct tgggatttta ttaattattg cagcctgttt
     5161 catggtctat cgcatgatta ctaaccctgg cgcagatctt accaatgaag taaagggctt
     5221 aactggttgg aaactggctg ttggtattgc ctttgatttt atggtgggaa tgctgatgag
     5281 tatgggactg ggtaactatg ctcctgagtt aattttcttc tcattgatgg gaattagtcc
     5341 agcggttgct cttccagtta tgatgttgaa tgctgctatg attatgacag ctggtgccaa
     5401 gcagtttatt caatcaggac gagtaaactg gccaggagtt ccaggaatca ttgtcggtgg
     5461 ggtgctaggt gttttgacag ccgctttctt cctatcaaat ttggatatta ataatttgaa
     5521 aattttagtt gtcttcattg cagcgtatac aggctttact ctgcttcgtt catcctttgt
     5581 tactaggatt aaaaaatagt aggaggaact atggatattc atttacgaaa tgaaattgat
     5641 ctggacgggc agattgaggt agtggatcag caatttcaag tggaagttaa ggaaaaagat
     5701 gggaatctct atctcatcta tagtaacgat gaagctgaaa aagttgtcat aaaatgtgac
     5761 gaagaagagt tagtgatgac acgcttttcc actccgaagt ctattatgcg attcatttct
     5821 ggtaaagaag ctattgtgac cattcctaca ccgttaggaa tccagcattt tgtgaccgat
     5881 acaaaacgtt accaattaaa ccgttcggat caaagtgtcc agttgcaata tgaattaaag
     5941 ggattggaga accagcagct ttttgcttcc tataatttgg aaatctcgtg gaaataatct
     6001 cttatttcca gaaaaatatt cttgaatttc tcgggatttt tgatataata gttaacaaat
     6061 cgagggagta gctagcggaa aattccgtga tattgtcgtc aatccgactt gtttccggca
     6121 atatattaaa tagcgagact tgttttagaa cctgtcttcg caagtaaggt atttttagat
     6181 aagagatagt tttttgtcta tcaaggcagt tttttgaagg aatactgact gtatttcaaa
     6241 aaaaactaat actcaatgaa aatcaaagtc aggctaggcg acgccgatgc agattgaact
     6301 aaagttcatc aattcaagtc aacaatgcct gagtttgatt ttcgaagagt ataaagatga
     6361 gcgacggaaa actagcctta gtagaagtgc cgagctgtga agagaggttc tcattaaaca
     6421 ggtctctttt ttatttgtta ggtaaaaaag ggaccgagaa ggagaaggaa attgtcaaaa
     6481 gaacaaaaac gcgatttgtt ttatacacag agcgaagagc aagtattgtc aagcatgggg
     6541 tcttctttgg acggtttgtc tagtgaagag gcaagcaaac gtctagcaga ctacggtcgt
     6601 aacgaattgg atgagggtga aaaacgcaca ctcttagcta aattcttgga tcagttcaaa
     6661 gacttgatga ttatcatttt gattgcagca gcaatcttga cggtgattac agaaggttca
     6721 cacggtttga cagatgccat tatcatcttg gccgtggtta tcttgaacgc tgcctttggt
     6781 gtttatcaag agggtcaagc tgaggcagct attgaggcgc taaaaaacat gtcaagccca
     6841 gttgcgcgtg cgcttcgtga caatcatgta gtcgaagttg attctaaaga cttggtacca
     6901 ggtgacatcg tcttgcttga agcaggtgat gttgtccctg cggatatgcg tttgttggaa
     6961 gctaactccc tcaaaatcga agaggcagct cttacaggtg agtctgtacc agttgataaa
     7021 gatttgtcag cagttttggc tgaagatgca ccaatcggtg accgtgtcaa catggcctac
     7081 caaaactcta atgttactta cggccgtggt cttggtgtgg ttacaaatac aggtatgtac
     7141 acagaggttg ggcacatcgc tggcatgctt gctaatgctg atgagactga tacaccattg
     7201 aaacaaaact tgcaccagct atcaaaagtc ttgacatacg cagttcttgt aattgcagcg
     7261 gtaacgatgg ctgtttcagt cttcgtacgt ggtgaaggta tcttgcctgc tcttatgact
     7321 tctgtagctc ttgcggttgc ggccattcca gaaggtttgc cagctattgt aacggttgtc
     7381 ctttcacttg gtacacaggt cttggctaag cgtaactcga tcatccgtaa gttgcctgct
     7441 gttgaaacac ttggttcaac tgaaatcatc gcatcagata aaactggtac tttgactatg
     7501 aaccagatga ctgttgaaaa agtctataca aacggtcaat tggtggatgc taaagaagct
     7561 ttggatgcaa gcaatacaac gcttcgtgtt atgaactttg ccaacgatac aaaagttgac
     7621 ccaactggta aattgatcgg tgacccaact gaaacggcac ttgttcaatt tggtttggac
     7681 caaaactttg acgttcgtga agttttggtt tctgagcctc gtgtggctga attgccattt
     7741 gactcaacac gtaaattgat gtcaactgtt caccaacagg ctgctggaaa cttctttgta
     7801 gctgttaaag gtgccccaga ccaattgctc aaacgtgtaa cgcaaattga agaaaacggt
     7861 acaatccgtc cgattaccga tgcggataaa caagccattc ttgcaactaa caaagagttg
     7921 gctaagcaag cccttcgtgt cttgatgatg gcatacaagt atgttgatgc tattcctgaa
     7981 ttggaatctg acgttgttga aaacgacctt gtcttctcag gtttggttgg tatgattgac
     8041 cctgagcgtc ctgaagcggc agaagctgtt cgtgtcgcta aggaagctgg tatccgtcca
     8101 atcatgatta cgggtgacca ccaagataca gctgaggcga ttgcaaaacg tcttggtatc
     8161 atcgatccaa acgatacaga agaccatgtc ttcactggtg cagagctcaa tgaattgacg
     8221 gacgaagaat tccaaaaagt ctttaaacaa tattctgtat atgcgcgtgt atctccagag
     8281 cacaaggttc gtatcgttaa ggcttggcag aatgacggta aggttgttgc catgacaggt
     8341 gacggtgtaa acgatgcacc atcgcttaag acagccgaca tcggtatcgg tatgggtatc
     8401 acaggtacgg aagtttcgaa aggtgcctct gatatggtcc ttgcagatga caactttgca
     8461 actatcatcg tggcggttga agaagggcgt aaagtcttct caaatatcca aaaaacgatt
     8521 cagtatctct tgtcagctaa cactgctgag gtattgtgta tcttccttgc aaccctcttt
     8581 ggttgggacg tattggagcc agttcatctt ctttggatta acttggtaac agatacactt
     8641 ccagctatcg cccttggtgt tgaacctgct gagccaggtg ttatgcagca caaacctcgt
     8701 ggtcgtaact caagcttctt ctcaggtggt gtcttgagtt cgattatcta tcaaggtatc
     8761 cttcaaacag cacttgtctt gggcgtatat ggttttgcac ttctttaccc agagcatgct
     8821 ggagataacc atgccattca tgcggatgct cttacgatgg catatgttac tcttggattg
     8881 attcagttgg tgcatgcctt caacgttaag tctgtttacc aatctatctt taccgttggg
     8941 ccattcaaga acaaactctt taactggtct atcgtagctg ccttcttgct cttgatggcg
     9001 actgttgtga ttccaggatt caataccttc ttcaaggtat ctatcttgac accaactcaa
     9061 tggatggtaa cagtaatcgg ttcaggtctc atggttgtcg ttgtagaaat tgttaaattt
     9121 gttcaacgta aaatgggatt ggatgaaaaa gctatctaat atagttattc agcttatctt
     9181 ttattacttc gttaactcgc cttgccgtac ctcagtacag cctgcgactc gttgccttgt
     9241 actaaaagca aactgaagac tatatcattt gaaaaagctc agatttagtg gtctgagctt
     9301 ttttctgtac tgataatgta ttttgggaag attgcttgtc ccaacaaagt gatggctagt
     9361 gctagtatga ggaggatggt tttgacaaga gttggtaagt taaatagtaa ggcgattggt
     9421 acgatagcca agctgaagta gtagagaatg aagtacctac tgttttccat tatttggacc
     9481 ctatcgcctt ccttaacttg aatggctgat tttttatccc ctcgaatgct tagtgtaaca
     9541 gatggttgtg taattggtaa gcttagaatt ttaccttgag taactgtccc agcaattttt
     9601 ccatctacca ggagcggaag tttttgggag gatagttgtt tgataggttt tggataatga
     9661 ataataactc tcatatgaac ctccttgtaa tctagtttca ttatagcaaa aaagaaaaaa
     9721 atgtaaacga tttctgacac tgttttcccc tacaggcttg cttgaagaat aagaaactgc
     9781 tataattttg aagaggtagg agtttatatg aattatcttc agaattatat tttaagtaaa
     9841 agcagttatt tgccatctga taagttattc attctgcaaa aagaactaga agatttagac
     9901 gatgaggctt taaacgttgt tatgatggtt gagatgcgtc aacctcttgt cgctcttatt
     9961 ttagctattt tcttcgggga gtttggtgtc gaccgttttt atgtcgggaa taaagaattg
    10021 ggatttgcca agctgattgc ttttgcagta tcttttgtta cgctatttat cttgattggg
    10081 ttcttgttat tttttgggct ttatttgtgg aaatttattg attgcttctt aatcatgcga
    10141 gcatgtaagg aagcgaactt tgagcgtttg atgctacaaa tccatcaata taaggctttt
    10201 cagcatagca atcagacatt ttaagtaaga tatttttggg aataagggga ggcttggtag
    10261 tgtcttcctt ttctgttttt agtaggctgt aaagtacttg taatatggaa cgagctttgt
    10321 cacagaagtg acattttata gaacagcatt tatgatataa tgataaaata tgctagttga
    10381 gaggagaatt tctatgcaga caaagaaaat gagtatgttt ttattctttg cttatctcct
    10441 tttacttact tggatgattg tctttaagat ggacttgagc atcgtatatg gacgctatgg
    10501 ttatgctagt ataaacttaa ttccgtttgc aggaacagcg gtctatgatg gagtgctgga
    10561 ttttccagaa attctattta atattgtaag ttttattccc tttggtattt atatggaaat
    10621 gctatttcgc aaggcatcgt gggtggctaa tctatgtttg attatgttag tgagtctctg
    10681 ctttgaggtt ctgcaatatc ttcttttact tggggttgca gatataactg atttactggc
    10741 taacggctta gggggagcaa tcggtattaa tatcatgtat gtcttgacca gtatttggcg
    10801 ggagaaggcc tatgttcgta tgaatatttt ttgttttgtg ctaacgtttt ttgttatatt
    10861 aataacttat ttagctatgt aggtcttgct aaatatatcc aaagtttgct aaaatgaata
    10921 taatgaatat taaggaagag attattaaat tatctcagga aatcggaatc tcgaagattg
    10981 gttttacaac ggctgatgat tttgcttatt tggagaaatc acttcgtgct agtcaggaag
    11041 aagggcgttc gtcaggattt gaacacaaga atatcgaaga acgtatccgt cccaaactgt
    11101 cgttagaatc tgccaaaacc atcatttcta tcgcggtagc ttatcctcga catttgcctg
    11161 tcaaaccgca gaagactcaa tacaaacgtg ggaagattac ccctagttca tgggggcttg
    11221 attaccacta tatcttgcaa gataagatgg agcgtttggc acggggaatt gagaaactga
    11281 tggatggttt ggaatacaag gctatggtag atacaggagc tttggtggat acagctgttg
    11341 ccagaagagc aggaattggc tttatcggta agaatgggct agtcatttct aaggaatttg
    11401 gttcctatat gtttctagga gaattagtga ccaacctgga catcgaacca gatcaaccag
    11461 tagattatga ttgtggtgat tgtaatcgct gtgttgcagc ctgtccgacg tcttgtctat
    11521 taggtgatac gaccatgaat gcccgtcgtt gcttgtcctt tcagacccag gataagggta
    11581 tgatggactt ggagtttcgt aagaaaatca agacggtcat ctatggttgt gatatttgcc
    11641 agatttgttg tccttacaac aagggaattt ctagtccacc tgtggtggag attgacccag
    11701 aattggctga gcctgagctg attccattct tggacttgtc aaatggacaa ttcaaggaga
    11761 aatttggtat gattgcaggt tcttggcggg ggaaaaatat tctccagcgt aatgccatca
    11821 tagctttggc caatagcaat gatcgctctg ccattcccaa actcctggaa atcatcgata
    11881 aaaagcaaaa tccaatccac atggcgacag ctatctgggc cttggggcaa ttggtcaaac
    11941 agcccaatga tgagatggtt tcctttatcg caggtatttc atcagacaat gatgatgtca
    12001 tagcagagca aacggccttt ctcaacatgg tcaaggactt gcaaatgtga tataataaag
    12061 attatgaata aaaatgaggt gtatatggat acagcagaaa ttcgccaaaa gattgaagaa
    12121 cttggcaaaa aattaacttc ttttaggggg tctctttgac ttagaaggtc tggaagaaga
    12181 gattgccatt cttgagaaca agatgacgga gccagatttc tggaatgata atttggcagc
    12241 ccagaagacg tctcaggagt tgaatgaatt aaaaaatact tatggaaatt tccatcagat
    12301 gttggattta tatgatgaat ccgaaatttt gctagatttt ctagcagaag atgagtctgt
    12361 gcgggatgag ttggttgaaa agttagcgga attggacaaa accatgactg cttacgaaat
    12421 gaccttgctc ttgtcagaac cctatgatca caataacgct atcttggaaa tccatccagg
    12481 ttcgggtggt acagaggcac aagactgggg agaaatgctc ctgcggatgt atcagcgtta
    12541 tggaaatgcc aaaggtttta cagtagaaac attggattat caagctggtg atgaggcagg
    12601 tattaagtcc gtgactctaa gctttactgg tccaaacgcc tatggcttgc ttaagtcaga
    12661 aatgggtgtt catcgtttgg tgcgcatctc accttttgac tcagctaagc gtcgtcatac
    12721 ttcctttaca tctgtagagg taatgcctga gttggacgat accattgaaa ttgaaatcag
    12781 agatgatgaa gtgaagatgg ataccttccg ttcaggtggt gctggtggac agaacgtcaa
    12841 caaggtctca acgggtgttc gattgacgca cattccgaca ggaattgtga ctcagtccac
    12901 agttgaccgt actcagtatg gaaaccgaga ccgtgcaatg aaactcttgc aggctaaatt
    12961 gtatcaattg gagcaggaga ggaaagcggc agaagtagac tcacttaagg gtgacaagaa
    13021 agagatcact tggggaagtc agattcgttc ttatgtcttt acaccttata caatggtaaa
    13081 agaccaccgt actggttatg aggtggctca agtcgataag gttatggacg gagacttgga
    13141 cggctttata gatgcttatt taaaatggcg aattagctaa gaacctgtat ttacaagtga
    13201 agtgcttgta aataagagat agtttttcgc tcatcaagga agttttttga gagaatacgg
    13261 actgtatttt gaaaaaaacg ttctcaaatc taaagaaagg actgtctaag acaggaaatc
    13321 ctatgggaat aatagaaatg aaagacgttt ccaagaaata tggaaacgga acgactgccc
    13381 ttcgcggagt atcagtcaat gttgaagcgg gagaatttac ctacattgta ggtccttctg
    13441 gtgcaggtaa gtcaaccttt atcaaactct tgtatcggga ggaaaagctc gataagggga
    13501 gtctaaaggt tggtaagttt gaccttgcaa aaattaaaaa gagagatgtt cctcttctac
    13561 gtcgtagtgt aggagtggtt ttccaagact acaaactctt acctaaaaag actgtctttg
    13621 aaaatattgc ttatgcgatg gaagttatcg gtgagaaacc acggaatatc aagaaacgtg
    13681 taatggaagt tttagatttg gttggtttga aacacaagat tcgctctttc ccaaatgaac
    13741 tttcaggtgg tgagcaacag cggattgcta ttgcccgtgc cattgtaaat aatcctaaag
    13801 tattgattgc tgatgagcca actggtaact tggaccctga aaactcttgg gaaatcatga
    13861 atctattgga gcgtatcaat ttacagggta caactgtttt gatggcgacc cacaatagcc
    13921 agatagtaaa taccctccgc caccgcgtta ttgcgatcga agacggtcga gtggtacggg
    13981 atgaagaaca aggagagtat ggatacgatg attagacgat tttttagaca ctttattgaa
    14041 tcattgaaga gtttgaagcg aaatggttgg atgacaattg cagctatttc atctgtagct
    14101 attactctta ctctggttgg tctatttgct tcagttattt taaacacagc aaagcttgct
    14161 tcggatttgg aacagaatgt acgtatcaat gtatacttga gagcgaactc aactgatcaa
    14221 gctgagacga ttgtgaacga agcaggagag acggtagcta atccagatta tcaaaaggtg
    14281 tacaatcaga ttacagccat agaaaatgta caatctgtta cttattcaag taaggatgaa
    14341 cagttgcaga aattaacagc taccttggga gacacttgga acttattcca aggagatgcc
    14401 aatccacttt acgatgctta tatcattgat acaacagatc caaattatgt taaatctgtg
    14461 gctgcagaga ttgctaaaat tgatggtgtt acagaggttc gagatggtga agtagagaca
    14521 gagcgcattt tcaagttggc tgatttagtc cggacttggg gattggcagc gactggttta
    14581 ttgctcttta ctgcggtctt cttgatttcc aatactattc gaattaccat tatttctcgt
    14641 agccgtgaaa ttcagattat gcgtctggtt ggtgctaaaa acagttatat ccgtggacca
    14701 ttcctctggg aaggtgcctg ggtagggttc ctcggagcta ttttaccttc tgttttagtc
    14761 tattctcttt ataagatgat ctatacttca gtaaatgcta gtcttgctag tcaagatttg
    14821 tctctgatta gtatgaatgt ctttgttcca ggaatgattg gcgcactttt tgtaattggt
    14881 attattattg gttccttggg atcagtcatt tccatgaacc gctacttaaa aatttaatag
    14941 acaagctaca tgtaaaaagg tctgcacaat aatgaggcag acctttttgt tatggatgtc
    15001 tatggtgaga agattcgttc atctcttgtt taatagtaca gtcgcaggaa caatctccgc
    15061 aggatccttt tcctttgatg agactgcgaa tcgcaagaga aaataagatg acgatgatga
    15121 gaaagaggat aagtgtgggc attaatattc tcatttttct aatgttttta gcgtgacgat
    15181 tggaagagta ttggctggtt ttttcactag gctgtagatg gctgtgataa ttagaaagat
    15241 agcgataaat gtccagacgg ttggtaattg tccgtagata agtacaagac caatctgata
    15301 gataaccaaa ctacttgcat aggctaaacc tgtttggaaa ccgatagcaa tccatgtcca
    15361 cttagcttct cccatttcac ggtgaatggc accaatagcc gcaaaacaag gggcacagag
    15421 gagattgaag actaggaagg agtaggctga taacgctgta tagtcttgtt gtaaaagccc
    15481 ccagagttcg ggattttctt cggttgtttc tcctaattta tagaggatac caaaggtggc
    15541 aatgacggtt tccttggcta agagacctgt aatggctgca acagttgccc gccaatttcc
    15601 gaaaccaagt ggggcaaaga ggagagaaaa actgcgtcca atggaggcta agatactctc
    15661 atctgtttct accatttgta aagaccaatt ataggaactg ctgaaccaaa taatgatgtt
    15721 ggtcacaaat ataatggtac cagcccgttt gataaaacta agtgccttat cgaatgcata
    15781 ccggagaacc gtactgagtt tcggtaagtg ataagatggt aattccatga taaaggggct
    15841 tgcgactcca ccaagttgct tggtcttttt tagtgccatt ccggatagga cgatggcagc
    15901 cataccgaca aaataggcgc ttggagcaat ccaaggattg tcaggaaaga aagcaccggc
    15961 taccagtgaa atgataggaa gtttggcaga acagggcatg aaggttgctg tcataatggt
    16021 gatttttcgg tcctgttcat tttcaatagt ccggcttgcc atgactccag gaacgccaca
    16081 gcctgtggaa atcaacatgg gaataaagga tttgcctgat agaccaaaac gtctaaaaat
    16141 cctatccatg acaaaggcga ctcggctcat atagccgatg tcttccaaga ttcccaagca
    16201 gacgaagagg acgaaaattt gtggtacaaa acctagaatg gctccgcatc ctgcaataat
    16261 gccatcaagg accagagatt gtagccagcc agcgatttca aatcgatcta gatttgcctg
    16321 aataaggcct ggaacaagct ctccgaagag gacatcattc acccagtcag tccccattgt
    16381 accaaccgtt tgaatagaca ggaagtaggt cagccacatg actgccgcaa agatagggag
    16441 ggcaagaaaa cgattggtaa caagtcggtc gatgttatca gacaggttaa aagtcttatc
    16501 gctgtctttt gtgaccagtt ctgtgatttt ctcgataaat tggtagcgtt gattaacgat
    16561 aatggcttcc atatcgtctg cgtaaatttt ttccaaaatg gcaatgattt cggtcaaatc
    16621 aagcatgtct tgtgcattga gttgcaattg gtctagaatg acttggtctt gttcgagtag
    16681 cttaatggcg tagaagcgtt tttgatgatt tgggatggaa tccgataata ggtcaataac
    16741 ttgggcgagg ccggcttcaa attgtttgtc atactgagga tagattggct cggcttgttg
    16801 attggcaatt ttttctactt catggaggag ttgggatata cctagctttt ttagtgcact
    16861 gataggctgt acaggaactc ccagttgata ggagagttgg tcgctgttta ttgtgcgacc
    16921 ttgacttttc agggcgtctg tcatattgag ggcgataaca ataggaaggc ccatttctaa
    16981 taactgcaag gtcagataga gattccgttc caagtttgtt gcatcaagga cgttgaggat
    17041 agcagctggt tggtccgcta tcaaataatc tctggcaacc cgttcttctg gtgtgtaggg
    17101 agacagcgag tagatacctg gtaaatcttg aattagtaaa tgttttcgct ttttgatcgt
    17161 tccagatttt ctttcaacgg tgactccagg ccagttaccg acacgttggt tggttcctgt
    17221 taggaggttg aaaagagttg tttttccgct atttggattt cctgcaaggg cgatgtgttt
    17281 tgtcatttcc tcacctcgct tgtgatttga acaccaatca tttgcgcttc ggatttgcgt
    17341 agtgtcagct cgtatcctct caaggtaatt tcgattggat cgcccagggg agcgactttt
    17401 ttgagaaata gctgcgcgtt ctttgtaagt cccatatcca tgaggcgacg acggagtgca
    17461 cctgttgcat agatgtccat aaccttagct gagctaccaa taggtgcctc ggatagattg
    17521 attatttccg tagctgactt ttctattaaa accagagatt caataatttc tctgtctagg
    17581 gctagacggc ttgccttgac ttggaaaatt gcattggtct tggtttttga aatgatgcga
    17641 atctcttctc cgacttttaa acccaagtgc gctaagtgtt tacgaatatc atcttgcgtt
    17701 agacaatctt tgactaaata agattgtcca acttgaaggt tttgcagttt catatcgttt
    17761 cctttgtgat ttttataaca atagtatagc acaattcctt aaaagtgtca gacaattttt
    17821 aggaacggct tattttctct ttatttttct caatatttcc aaaaaatcca ttgacttttt
    17881 ttagagatat gatatactag tcaagtactg ctggtttagc tcagtcggta gagcgcatcc
    17941 atggtaagga tgaggtcgcc ggttcaatcc cggcaactag catcgaatac tatcgaaagg
    18001 ccttgtttga caaggttttt tcttattttt gtcctaaatt cgcccttatt gtcaaaaatc
    18061 ccttgacatg aatgtttatt atggtagaat agggcttaga aatatgaaag gagtaaaaca
    18121 aatgaacaag caacttgtca ttcagcaagc tattttttat catacactcc tttctaagca
    18181 ggaaaacaaa gctcattgat gaacttttgt cgtttttcgt gggctatatt ttgaaacatt
    18241 gagacaatca agcactgtgg ctatggtgtg ataaaaattg tcgactatgt tcaagagctg
    18301 gtctattttt gtggacttac gcaagcctag gtggagtgaa atgcttccct aggctttttt
    18361 gtgtgcttag aaaggtaatg ctcttcgaaa atcaaaatta tccgttgtca acttgccttg
    18421 atgaactcca gttctatctt cgacatcgtt ttctaggcta cttttgattt tcattgagta
    18481 taacgtctat caattgttgc tgattgaata aagtggcaaa tgataggtta tagatttgta
    18541 aaggagatat atgtttcgat taatttttga ttatatcaag cgtcataagt ggctctatct
    18601 attggttgct gtgaccttga ttatttatga cgccacactt ttgctaccaa cgcaaatcat
    18661 tcagcggatg gtcgatatac tgaccaagaa tgaattaaca caggccatat tggttcagga
    18721 gatgacctta ttgttattgg taacagtgct gaactatgca acagccttca tttggcatct
    18781 gaaattattt caggcctctg tcaatttcaa gtttgatatg cagcaacgtg cctttaaaaa
    18841 attagtgacc atgcggactc cattttatga aaaattccgc tcaggagatg tcatgactcg
    18901 tttttcaacg gatgtggatg gcctgatgga gatggtgggt tacggtctta tgattgtcgt
    18961 ctatgcaggc ggtatgttgg cttttatcat tcccacgatg ttctttattg attggaaaat
    19021 ttcgctagta gctttattac cgatgttgtt catgacacta tgtatatttt ttatcgggag
    19081 aaaacaagat aaggcgattg atgccaatag agaagctgta gcccagctca ataatgaagt
    19141 tttggaggtc atcgaaggta ttcgagtgac tcgggcttat agtaaaaaag caaatcaaaa
    19201 ggctcaattt caagctcgta ccaaacaatt ggctcaaggt ggggaccgaa tcacttcctt
    19261 gcaatcattg tataatccat tagccacagt ctgtttggga ttgtctacta ttttcgtgct
    19321 tctcatgggg gcacaagccg tgaaagcagg gcaactgacc ttgggacaag taattgccct
    19381 tcaattgtat gtcggttcgc ttttagagcc gttttggaca ctagcagatt tcatccttgt
    19441 ttatcagact ggtaagacat ctttcgaaaa actgcaagag ctgattgaga cgggtgatga
    19501 tttggaggct gatggttcta aggaaattgc agagctgtct agtatttcct tcaaaaatta
    19561 tagctttagt tatccacagg cggaaagagc cagcctacag gacatcaatt ggacactgaa
    19621 agcagggcaa actgtaggta tcgttgggaa aactggttcg ggaaaaacga ccttggttcg
    19681 ccaattctta cgccagtatc cgattggtca gggaaatttt ttcatcaatc atcaatctgt
    19741 tttagacttt aaacgttcta gtatagagga aaaaattggc tatgttccac aagaacacat
    19801 tttgttttca aggtctgttg gagaaaatat tgcccttggg aaagtagtta gtagctctga
    19861 ggagattgaa caagccattg ccacagcagc ttttagtcaa gatttaaaac ggatgactga
    19921 tggtcttgat accatgattg gtgagcgtgg tgtatctatt tctggcggtc agaaacaacg
    19981 gatttccatt gcccgtgctt tcctgcgaga gccagatttg ctgattctag atgattcttt
    20041 gtcggcagtg gatgctcgga cagaacgcca gattatccaa aatattcaaa aagaacgtgc
    20101 aggcaaaacc aatgtcatcg tgacccatcg tctatctgct gtcaaccatg cagactgggt
    20161 actagtcttg gatgaggggc gtatcgttga ggaagggcgt ccagctgatt tgcttgccca
    20221 aagaggttgg tactatgaac aataccaacg acaacaaagc caggaaggag gagagtaatg
    20281 actattttag gttttttatt aaaacaaatc ggtcgtgtta agtggctatt tatagtagct
    20341 gtcggcttct atctattggc ttcgaccatg gttcgattgg ctcctctgct gattcagcag
    20401 gcgattgatg ggccgattac ggatttgagc aagggtttgc cttttgatga agctgttttc
    20461 ttaaaccagt cagctcaata catgggaatg attattctgg gagctattgg cttctaccta
    20521 tctatgcgtc tactcatgca ttgcgccaat cgtattgctg aaaatctgcg taatcaagcc
    20581 tacgatgtta tgcaacggtt gcctatttct tattttgatg ataagcccgc tggaaaaatt
    20641 gcaactagaa ttgtcaatga tacagaaacc ctgcggacac aattttatgg gaccttagtt
    20701 aatgccttta acaatattgt tcgtttgctc tttacatacg gtgtcctatt ttacatgaat
    20761 aggagtcttg gttggctgat gttactctta ataccactct atatcggcat tcaatttgct
    20821 tacaagaaaa tgacagacaa gccaatgaag gatttttatg atgcaaggag tgacgtcaat
    20881 acgcaggtga atgagaccat gaatggtgca agtttgattc aactttttgg acaagaagag
    20941 cgcatcatga aagaatttga agtgactgct gacaagatgc gtcgggcaga taataagatt
    21001 atctgggccc agtctcttgc cacgtggaat ctgagtggtt ttcttcaaaa tttggtcatt
    21061 gctgcgattt taacggtagt cggctatcaa tttcttgcgg gacaggatgg agttacagct
    21121 gggaaactct ttgtttatgt caactatatc gaaggagtct tcattgcttt gggagcgctg
    21181 gttcaacagt tcccaaatat gcttcgctct tttgaaacag gtaagcgtct aatggccctt
    21241 ctagaagaag aggtggagga cgactgtgat cgtattttgg aagttgaaca agggcaagtc
    21301 gtgtttgaac acgtgaactt tagctatgaa gaaaacagac cagttttgaa agatattacc
    21361 attcgggcag aaaaaggaga aacagttgct ttggttgggc atactgggtc tggtaagtct
    21421 tctattatga acctcctcta tcgtttctat gatccacagg agggacgtgt actgattgat
    21481 gggaaaaaca tccgtgatta ttcccgtgaa agcctgcgca gtcacatggg gattgttttg
    21541 caagatccct atctctttac agggacgatt gccagcaatg tttccatgaa tgaagaggaa
    21601 gcagatagaa caagaatcat gcaggcgcta gaaaaagttg gtgcagggcc tatgctatct
    21661 cgcttagaga aagggattga tgaaccggtt gttgagaagg gggcggcctt ttcaagtggg
    21721 gaacgtcagt tgattgcctt tgcgcggaca ctctactctg atcctaaaat tctgatattg
    21781 gatgaagcaa cttctcatat tgatacggag acggaagaaa ttatccaaca tgccatggaa
    21841 gtggtaaaag aaggtcggac aacctttatt attgctcacc gactttctac cattcaaaat
    21901 gcagaccaga ttcttgtctt agatcaaggt cgaattattg aacatgggaa gcatgaagaa
    21961 ttggttgcac atggtggagt atatgctcaa atgcatgaga ttcaagcaaa ggtgtaataa
    22021 gcagttaaaa attccaagct ttggctggaa ttttttgcta taattgactc atgaaagcct
    22081 taatttttga tgtagatgat acgctttatg atcagattca accgtttgaa cgtgctttgg
    22141 aaagacatat tgaagtagca agggagcaaa ttgaaccact ctacctttcc tttcgcagat
    22201 atgcggatga agtatttgaa gcgacagcaa ttggaaagat gagtctgaaa gacagttata
    22261 tttatcggat gaaacatgct ttggcagatt ttgggtatca ggtgtctgat gcagcagcct
    22321 tagctattca aatagattat gattattttc aagggcagat agagctcagt ccagtgtttc
    22381 cagaaatatt ttcatggtgt caggcgcaag gaattgcaat ggggattatt acgaatggac
    22441 cttatagaca tcagttgaga aagatacgca cgatggggtt agttaattgg tttgagctag
    22501 aacatgtcct aatttctgga caagttggta tcacaaagcc aaatcctgct atttttcaac
    22561 taatggaaga acgtttgggg ctgtcaggcg aagatatttg ttatctaggg gattcgtttg
    22621 aaaatgatgt ggtaggagcg aaagctgcga attggaaggc aatttggttt aatcatagaa
    22681 agagagtaga gccaacagct ccgtatcagg cagataaagt ggtgacagat tgggatgaac
    22741 tggtcgaagt tatccagtct ttctagtggt ttctacaagg gattatcaat tttttatagg
    22801 tgtgatagat aaaatatatt agcaggatac ctgtctttat gatagtataa aatgtaagca
    22861 tagaagtata ggtgtgaatc caagcagatt tttattccta ttctatgaaa ttttttgaaa
    22921 tggagttacc tatgacacaa gctttctttc ctatccatac tctagagact gttagtccag
    22981 aattacgaga aaaccttgcg actgtcaaga aaaataatgg cggttatatt cctaatctca
    23041 tcggtctttt agccaattct cctacagccc tagaaaccta ccaaactgtt agtggtatca
    23101 atcgccgtag tagcctgaat cctatggagc gtgaagtggt acaaattaca gctgccgttg
    23161 ccaatggctg tggattttgc gtggcaggtc atacggctat ttctatcaag caggttaaga
    23221 tgccagatgt tattctacag gctctacgcc agggaactcc catcgaaacg gatgcaaaat
    23281 tggatgctct cgctcgattt actctggctg ttatccatga aaaaggcaag gttgaacagc
    23341 ccttgctaga ggaatttttc caagagggct acacggctga aaatgccttg gatgtggtgt
    23401 taggagtcag tcttgcaact ctttgtaatt atgccaacaa tctcatcaac actcctatca
    23461 atccagaatt acaggcctat gctctgtagg agttccagca gaatatgtat cgaaaactag
    23521 ttaggacgtt tacgttatcc taactagttt ttttgaatta accaagtgtg attttcctaa
    23581 tatacatttg atactcttcg aaaatcaaaa ttatccgttg tcaac
//
LOCUS       DBNFCX010000029        23289 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.029, whole genome shotgun sequence.
ACCESSION   DBNFCX010000029 DBNFCX010000000
VERSION     DBNFCX010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 23289)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23289)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23289
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.029"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(291..1586)
                     /locus_tag="AC1PJC_000981"
     CDS             complement(291..1586)
                     /locus_tag="AC1PJC_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002899672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0042398 - modified amino acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-cysteine ligase family protein"
                     /protein_id="HIP6619977.1"
                     /translation="MNREDRISIGNCFEEYYFANIKEKPELFIGVELEYPIVNISGKA
                     TSIQVATDMMRHISNQNGFTIVKRDDRGNPIELQHESGDLILFEVTYNTLEFAFAKAK
                     NIGSVEERHKEYLENIQYYLRQNGHELQGLGINPNLENNDNRPVDTGRYRMLMNYLKL
                     GEGKPNMHPYTGYAGFICGNQVQFDVSRKSFLRVINAFNKIEAAKAFLFANSPFDHMD
                     DMALTRDYFWEYSMHGLLKNNVGIYSEEFQTEAEYRQYQEESAMFYVIRDNCYYYFKP
                     ITVKSFFEQEKFAAYSETGEICYFVPKADDFKNHRSYHYQELTKRGTIEFRSTCTQPF
                     ETTFAPIALHLGLLANLVKLEEILESTEFFIEFGRDYSKLRRQFSRKKLSDLEQRMVK
                     DFSKTLLDCAHEALLLRGYSEEKYLTPLYTSLIDDSGAL"
     gene            complement(1785..2171)
                     /gene="rplQ"
                     /locus_tag="AC1PJC_000982"
     CDS             complement(1785..2171)
                     /gene="rplQ"
                     /locus_tag="AC1PJC_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002887523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HIP6619978.1"
                     /translation="MAYRKLGRTSSQRKAMLRDLTTDLLINESIVTTEARAKEIRKTV
                     EKMITLGKRGDLHARRQAAAFVRNEIASENYDEATDKYTSTTALQKLFSEIAPRYAER
                     NGGYTRILKTEPRRGDAAPMAIIELV"
     gene            complement(2186..3124)
                     /locus_tag="AC1PJC_000983"
     CDS             complement(2186..3124)
                     /locus_tag="AC1PJC_000983"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000568977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HIP6619979.1"
                     /translation="MIEFEKPTITKIDENKDYGRFVIEPLERGYGTTLGNSLRRVLLA
                     SLPGAAVTSIKIDGVLHEFDTVPGVREDVMQIILNIKGIAVKSYVEDEKKIELDVVGP
                     AEVTAGDILTDSDIEIVNPDHYLFTIADGATFKAVLTVNSGRGYVPAEGNKKDDAPVG
                     TLAVDSIYTPVKKVNYQVEPARVGSNDGFDKLTLEINTNGTIIPEDALGLSARILMEH
                     LGLFTDLTEVAKSAEVMKEAEVASDDRMLDRTIEELDLSVRSYNCLKRAGINTVFDLT
                     EKTEPEMMKVRNLGRKSLEEVKVKLADLGLGLKKDK"
     gene            complement(3169..3552)
                     /gene="rpsK"
                     /locus_tag="AC1PJC_000984"
     CDS             complement(3169..3552)
                     /gene="rpsK"
                     /locus_tag="AC1PJC_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003130556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HIP6619980.1"
                     /translation="MAKPTRKRRVKKNIESGIAHIHATFNNTIVMITDVHGNAIAWSS
                     AGALGFKGSRKSTPFAAQMASEAAAKSAQEHGLKTVEVTVKGPGSGRESAIRALAAAG
                     LEVTAIRDVTPVPHNGARPPKRRRV"
     gene            complement(3570..3935)
                     /gene="rpsM"
                     /locus_tag="AC1PJC_000985"
     CDS             complement(3570..3935)
                     /gene="rpsM"
                     /locus_tag="AC1PJC_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008809894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HIP6619981.1"
                     /translation="MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVR
                     VKDLTSDQEDAIRREVDAIKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNT
                     KNNARTRKGKAVAIAGKKK"
     gene            complement(3955..4071)
                     /gene="rpmJ"
                     /locus_tag="AC1PJC_000986"
     CDS             complement(3955..4071)
                     /gene="rpmJ"
                     /locus_tag="AC1PJC_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013773089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HIP6619982.1"
                     /translation="MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG"
     gene            complement(4096..4314)
                     /gene="infA"
                     /locus_tag="AC1PJC_000987"
     CDS             complement(4096..4314)
                     /gene="infA"
                     /locus_tag="AC1PJC_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003130554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HIP6619983.1"
                     /translation="MAKEDVIEIEGKVVDTMPNAMFTVELENGHQVLATVSGKIRKNY
                     IRILVGDRVTVELSPYDLTRGRITYRFK"
     gene            complement(4436..5077)
                     /locus_tag="AC1PJC_000988"
     CDS             complement(4436..5077)
                     /locus_tag="AC1PJC_000988"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001050429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HIP6619984.1"
                     /translation="MNLLIMGLPGAGKGTQAAKIVEKFNVAHISTGDMFRAAMANQTE
                     MGILAKSYIDKGDLVPDEVTNGIVKERLVQDDIKEKGFLLDGYPRTIEQAHALDENLA
                     DLGIELQGVINIEIDPSKLVERLSGRIIHKETGETFHKVFNPPVGDYKEEDFYQREDD
                     KPESVKRRLEVNIAQGQPIIDHYRAKGLVHDIEGDQDIDLVFQAIDTVLSKLQ"
     gene            complement(5171..6481)
                     /gene="secY"
                     /locus_tag="AC1PJC_000989"
     CDS             complement(5171..6481)
                     /gene="secY"
                     /locus_tag="AC1PJC_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HIP6619985.1"
                     /translation="MFFKLLKDALKVKLVRSKILFTIFILFVFRVGTHITVPGVNAKS
                     LEALSNVPFLNMLSLVSGNAMRNFSVFALGVSPYITASIIVQLLQMDILPKFVEWGKQ
                     GEVGRRKLNQATRYISLVLAFVQSIGITAGFNALSGAKLTNMPLNWQTYLLIGSILTT
                     GSIIVTWLGEQISEKGYGNGTSMIIFAGIISSLPGTFHEIYIDRFVNIESSRLGESAI
                     FVAALVVLIFFVVYFTTFVQQAEYKLPIQYTKRAQGAPSSSYLPLKLNPAGVIPVIFA
                     GSITAVPTSLIQYFASQNKSAGWLLTVQEYFDYSTAKGMIVYAGLIIAFTFFYTFVQV
                     NPEKTAESLQKSAAYIHGVRPGNGTEQFLSKLLTRLAVIGALFLSFVALLPILAQNLF
                     GLSSSIAFLGTSLIIVISTSIEGIKQLEGYLLKRKYVGFLEITE"
     gene            complement(6495..6935)
                     /gene="rplO"
                     /locus_tag="AC1PJC_000990"
     CDS             complement(6495..6935)
                     /gene="rplO"
                     /locus_tag="AC1PJC_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004225266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HIP6619986.1"
                     /translation="MKLHELQPATGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGG
                     GVRPGFEGGQTPLFRRLPKRGFTNINAKEYAIVNLDQLNAFEDGAEVTPVVLIEAGIV
                     KAEKSGIKILGNGELTKKLTVKAAKFSKSAEEAITSKGGSVEVI"
     gene            complement(7071..7253)
                     /gene="rpmD"
                     /locus_tag="AC1PJC_000991"
     CDS             complement(7071..7253)
                     /gene="rpmD"
                     /locus_tag="AC1PJC_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018376783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HIP6619987.1"
                     /translation="MAQIKITLTKSPIGRKPEQRKTVVALGLGKLNSSVVKEDNPAIL
                     GMVNAISHLVTVEEVK"
     gene            complement(7268..7762)
                     /gene="rpsE"
                     /locus_tag="AC1PJC_000992"
     CDS             complement(7268..7762)
                     /gene="rpsE"
                     /locus_tag="AC1PJC_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018376782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HIP6619988.1"
                     /translation="MAFKDNAVEIEERVVAINRVTKVVKGGRRLRFAALVVVGDRNGR
                     VGFGTGKAQEVPEAIRKAVESAKKNMIEVPMVGTTIPHEVRSEFGGARVLLKPASEGS
                     GVAAGGATRAVIELAGIADVTSKSLGSNTPINIVRATVEGLKQLKRAEEVAALRGISV
                     SDLA"
     gene            complement(7781..8137)
                     /gene="rplR"
                     /locus_tag="AC1PJC_000993"
     CDS             complement(7781..8137)
                     /gene="rplR"
                     /locus_tag="AC1PJC_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HIP6619989.1"
                     /translation="MISKPDKNKIRQKRHRRVRGKISGTAARPRLNIFRSNTGIYAQV
                     IDDVAGVTLASASTLDKEVSKGTKTEQAVVVGKLVAERAVAKGISEVVFDRGGYLYHG
                     RVKALAESARENGLKF"
     gene            complement(8226..8762)
                     /gene="rplF"
                     /locus_tag="AC1PJC_000994"
     CDS             complement(8226..8762)
                     /gene="rplF"
                     /locus_tag="AC1PJC_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016399261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HIP6619990.1"
                     /translation="MSRIGNKVITLPAGVELAQNNGVVTVKGPKGELTREFPTAIEIR
                     VEGAEVTLHRPNDSKEMKTIHGTSRANLNNMVVGVSEGFKKELEMRGVGYRAQLAGNK
                     LTLAVGKSHPDEVVAPEGITFEVPTPTQIVVSGINKEVVGQTAAYIRSLRAPEPYKGK
                     GIRYVGEFVRRKEGKTGK"
     gene            complement(9006..9404)
                     /gene="rpsH"
                     /locus_tag="AC1PJC_000995"
     CDS             complement(9006..9404)
                     /gene="rpsH"
                     /locus_tag="AC1PJC_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009754342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HIP6619991.1"
                     /translation="MVMTDPIADFLTRIRNANQAKHEVLEVPASNIKKGIATILKNEG
                     FVKNVEFIEDDKQGIIRVFLKYGPNGEKVITNLKRVSKPGLRVYSKREDIPKVLNGLG
                     IAIISTSEGLLTDKQARQKNVGGEVIAYVW"
     gene            complement(9594..9779)
                     /locus_tag="AC1PJC_000996"
     CDS             complement(9594..9779)
                     /locus_tag="AC1PJC_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011245027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HIP6619992.1"
                     /translation="MAKKSMIAKNKRPAKFSTQAYTRCEKCGRPHSVYRKFKLCRVCF
                     RDLAYLGQIPGVTKASW"
     gene            complement(9794..10336)
                     /gene="rplE"
                     /locus_tag="AC1PJC_000997"
     CDS             complement(9794..10336)
                     /gene="rplE"
                     /locus_tag="AC1PJC_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018376779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HIP6619993.1"
                     /translation="MANRLKEKYLNEVVPALTEQFNYSSVMAVPKVDKIVLNMGVGDA
                     VSNAKNLEKAAQELALISGQKPLITKAKKSIAGFRLREGVAIGAKVTLRGERMYEFLD
                     KLVTVSLPRVRDFHGVPTKSFDGRGNYTLGVKEQLIFPEINFDDVDKTRGMDIVIVTT
                     ANTDEESRALLTGLGMPFAK"
     gene            complement(10360..10665)
                     /gene="rplX"
                     /locus_tag="AC1PJC_000998"
     CDS             complement(10360..10665)
                     /gene="rplX"
                     /locus_tag="AC1PJC_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HIP6619994.1"
                     /translation="MFVKKGDKVRVIAGKDKGVEAVVVTALPKVNKVIVEGVNIVKKH
                     QKPNSENPQGAIVEKEAPIHVSNVQVLDKNGVAGRVGYKFVDGKKVRYNKKSGEVLD"
     gene            complement(10848..11216)
                     /gene="rplN"
                     /locus_tag="AC1PJC_000999"
     CDS             complement(10848..11216)
                     /gene="rplN"
                     /locus_tag="AC1PJC_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012727667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HIP6619995.1"
                     /translation="MIQTETRLKVADNSGAREILTIKVLGGSGRKFANIGDIIVASVK
                     QATPGGAVKKGDVVKAVIVRTKTGARRADGSYIKFDENAAVIIREDKNPRGTRIFGPV
                     ARELRDGGFMKIVSLAPEVL"
     gene            complement(11241..11501)
                     /gene="rpsQ"
                     /locus_tag="AC1PJC_001000"
     CDS             complement(11241..11501)
                     /gene="rpsQ"
                     /locus_tag="AC1PJC_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006738952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HIP6619996.1"
                     /translation="MERNNRKVLVGRVVSDKMDKTITVVVETKRNHPVYGKRINYSKK
                     YKAHDENNVAKEGDIVRIMETRPLSATKRFRLVEVVEEAVII"
     gene            complement(11525..11731)
                     /gene="rpmC"
                     /locus_tag="AC1PJC_001001"
     CDS             complement(11525..11731)
                     /gene="rpmC"
                     /locus_tag="AC1PJC_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006739716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HIP6619997.1"
                     /translation="MKLQEIKDFVKELRGLSQEELAKKENELKKELFELRFQAAAGQL
                     EQTARLNEVKKQIARIKTVQSETK"
     gene            complement(11741..12154)
                     /gene="rplP"
                     /locus_tag="AC1PJC_001002"
     CDS             complement(11741..12154)
                     /gene="rplP"
                     /locus_tag="AC1PJC_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003029477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HIP6619998.1"
                     /translation="MLVPKRVKHRREFRGKMRGEAKGGKQVDFGQYGLQATTSSWITN
                     RQIEAARIAMTRYMKRGGKVWIKIFPHKSYTAKAIGVRMGSGKGAPEGWVAPVKRGKV
                     MFEVAGVSEEIAREAFRLAGHKLPVKVKFVKREAE"
     gene            complement(12158..12811)
                     /gene="rpsC"
                     /locus_tag="AC1PJC_001003"
     CDS             complement(12158..12811)
                     /gene="rpsC"
                     /locus_tag="AC1PJC_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000529931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HIP6619999.1"
                     /translation="MGQKVHPIGMRVGIIRDWDAKWYAEKEYADYLHEDLAIRNFIKK
                     ELADASTSTIEIERAVNKVIVSIHTAKPGMVIGKAGSNVDALRAQLNKLTGKQVHINI
                     IEIKQPDLDAHLVGESIARQLEQRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGAD
                     IARAEGYSEGTVPLHTLRADIDYAWEEALTTYGKLGVKVWIYRGEVLPARKNTKGGK"
     gene            complement(12824..13168)
                     /gene="rplV"
                     /locus_tag="AC1PJC_001004"
     CDS             complement(12824..13168)
                     /gene="rplV"
                     /locus_tag="AC1PJC_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018371349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HIP6620000.1"
                     /translation="MAEITSAKATARTVRVSPRKSRLVLDNIRGKSVADAIAILKFTP
                     NKAAGIIEGVLNSAIANAENNFGLEKANLVVSEAFANEGPTLKRFRPRAKGSASPINK
                     RTAHITVVVAEK"
     gene            complement(13186..13467)
                     /gene="rpsS"
                     /locus_tag="AC1PJC_001005"
     CDS             complement(13186..13467)
                     /gene="rpsS"
                     /locus_tag="AC1PJC_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000533767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HIP6620001.1"
                     /translation="MGRSLKKGPFVDEHLMKKVEAQANDEKKKVIKTWSRRSTIFPSF
                     IGYTIAVYDGRKHVPVYIQEDMVGHKLGEFAPTRTYKGHAADDKKTRRK"
     gene            complement(13569..14402)
                     /gene="rplB"
                     /locus_tag="AC1PJC_001006"
     CDS             complement(13569..14402)
                     /gene="rplB"
                     /locus_tag="AC1PJC_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019790357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HIP6620002.1"
                     /translation="MGIKVYKPTTNGRRNMTSLDFAEITTSTPEKSLLVALKSKAGRN
                     NNGRITVRHQGGGHKRFYRLVDFKRNKDGVEAIVKTIEYDPNRSANIALVHYTDGVKA
                     YIIAPKGLEVGQRIVSGPEADIKVGNALPLANIPVGTVVHNIELKPGRGGELVRAAGA
                     SAQVLGQEGKYVLVRLQSGEVRMILGTCRATVGTVGNEQHGLVNLGKAGRSRWKGIRP
                     TVRGSVMNPNDHPHGGGEGKAPVGRKAPSTPWGKPALGLKTRNKKAKSDKLIVRRRNQ
                     K"
     gene            complement(14420..14719)
                     /locus_tag="AC1PJC_001007"
     CDS             complement(14420..14719)
                     /locus_tag="AC1PJC_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007518994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HIP6620003.1"
                     /translation="MNLYDVIKKPVITESSMGQLEAGKYVFEVDTRAHKLLIKQAVEA
                     AFEGVKVANVNTINVKPKTKRVGRYVGRTNKVKKAIITLAADSKAIELFATADAE"
     gene            complement(14719..15342)
                     /gene="rplD"
                     /locus_tag="AC1PJC_001008"
     CDS             complement(14719..15342)
                     /gene="rplD"
                     /locus_tag="AC1PJC_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012677212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HIP6620004.1"
                     /translation="MANVTLFDQTGKQAGEVVLNDAIFGIEPNQAVVFDVIISQRASL
                     RQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYAYKLP
                     QKVRRLALKSVYSEKVAENKFVAVNSLEFTAPKTAEFAKVLAALSIDSKVLVILEEGN
                     EFAALSARNIPGVKVATATTASVLDIANADKLLVTQAAISKIEEVLA"
     gene            complement(15367..15993)
                     /gene="rplC"
                     /locus_tag="AC1PJC_001009"
     CDS             complement(15367..15993)
                     /gene="rplC"
                     /locus_tag="AC1PJC_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002986659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HIP6620005.1"
                     /translation="MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETD
                     GYAAVQVGFDDKREVLSNKPAKGHVAKANTAPKRFIREFKNIEGLEVGQEITVETFVA
                     GDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLAG
                     RMGGNRVTIQNLEVVQVVPEKNVILIKGNVPGAKKSLITIKSAVKAGK"
     gene            complement(16206..16514)
                     /gene="rpsJ"
                     /locus_tag="AC1PJC_001010"
     CDS             complement(16206..16514)
                     /gene="rpsJ"
                     /locus_tag="AC1PJC_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003046044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HIP6620006.1"
                     /translation="MANKKIRIRLKAYEHRTLDTAAAKIVETATRTGAQVAGPVPLPT
                     ERSLYTIIRATHKYKDSREQFEMRTHKRLIDIVNPTQKTVDALMKLDLPSGVNVEIKL
                     "
     gene            complement(17175..17753)
                     /locus_tag="AC1PJC_001011"
     CDS             complement(17175..17753)
                     /locus_tag="AC1PJC_001011"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HIP6620007.1"
                     /translation="MKDSFTERSKRLSEELERRLLADKNILVILDIMDRLNLSDCWLC
                     AGTIRNFIWNQYSFDEETDVDLVFFDENISYEETMEIESDLYQNYPSYRWELKNQVYM
                     HIHSPNTKPYQSSRDAIEKFPERCTAIGICRTERNKLEIFAPFGLDDIYAYQVRPTPH
                     FLADPNRMELYRQRILKKQWKKRWLSLTVKET"
     gene            complement(17961..18281)
                     /locus_tag="AC1PJC_001012"
     CDS             complement(17961..18281)
                     /locus_tag="AC1PJC_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1292 domain-containing protein"
                     /protein_id="HIP6620008.1"
                     /translation="MAHHHDHEHDHNHDERELITLVDDQGNETLFEILLTIDGQEEFG
                     KNYVLLIPASAEEDENGEVEIQAYSYIENENGTEGDLQPIPEDATAEWDMIEEVFNSF
                     MEEE"
     gene            complement(18293..18712)
                     /gene="ruvX"
                     /locus_tag="AC1PJC_001013"
     CDS             complement(18293..18712)
                     /gene="ruvX"
                     /locus_tag="AC1PJC_001013"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HIP6620009.1"
                     /translation="MRIMGLDVGSKTVGVAISDPLGFTAQGLEIIPIDEEKGEFGLER
                     LTELVEQYKVDKFVVGLPKNMNNTSGPRVEASQAYGDLLTERYKLPVDYQDERLTTVA
                     AERMLIEQADISRGKRKKVIDKLAAQLILQNYLDRTF"
     gene            complement(18712..18978)
                     /locus_tag="AC1PJC_001014"
     CDS             complement(18712..18978)
                     /locus_tag="AC1PJC_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002885737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IreB family regulatory phosphoprotein"
                     /protein_id="HIP6620010.1"
                     /translation="MGFTEETVRFRLDDTDKQEISKTLTSVYRSLEEKGYNPINQIIG
                     YVLSGDPAYIPRYNDARNQIRKHERDEIIEELVRYYLKGNGIDL"
     gene            complement(19078..19476)
                     /gene="spx"
                     /locus_tag="AC1PJC_001015"
     CDS             complement(19078..19476)
                     /gene="spx"
                     /locus_tag="AC1PJC_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017768833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator Spx"
                     /protein_id="HIP6620011.1"
                     /translation="MIKIYTVSSCTSCKKAKNWLNAHQLSYNEHNLAKEAITKEEILN
                     ILTKTENGIASIVSSKNRYAKSLDFDIEELSVNEVIDLITSNPRILKSPILIDEKRLQ
                     VGYKEDDIRAFLPRAVRNVENAQARMRAAL"
     gene            complement(19712..20863)
                     /gene="recA"
                     /locus_tag="AC1PJC_001016"
     CDS             complement(19712..20863)
                     /gene="recA"
                     /locus_tag="AC1PJC_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001085741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HIP6620012.1"
                     /translation="MAKKPGKKLEDITKKFGDERKKALDDALKSIEKDFGKGAVMRLG
                     ERAEQKVQVMSSGSLSIDIALGAGGYPKGRIIEIYGPESSGKTTVALHAVAQAQKDGG
                     IAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSV
                     AALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTVAIFINQLREKVGVMFG
                     NPETTPGGRALKFYASVRMDVRGNTQIKGTGDKKDQNVGKETKVKIVKNKVAPPFKEA
                     VVEIMYGEGISRTGELIEIGSNLGIIQKAGAWYSYNGEKIGQGSENAKKFLADNPAIF
                     DEIDRKIRVHYGLIEADGVEEVATEEAPVVAEEIQDVILDLDGGIELED"
     gene            complement(20915..22096)
                     /locus_tag="AC1PJC_001017"
     CDS             complement(20915..22096)
                     /locus_tag="AC1PJC_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HIP6620013.1"
                     /translation="MKAELIAVGTEILTGQIINTNAQFLSEKCAELGIDVYFHTAVGD
                     NENRLLSVLEVASQRSELVILCGGLGPTEDDLTKQTLATFLGRNLVFDELAMAKLDRF
                     FASRPGRVRTPNNERQAQIVEGSQVLQNPAGLAVGGMIEQDGVTYIVLPGPPSELKAM
                     FSESLLPLLSQSQQQLYSRVLRFFGIGESQLVTVLADLIDKQTDPTLAPYAKVGEVTL
                     RLSTKATSQEEANLRLNQLEEEILQHDKLADYFYAYGEDNSLVKTVATGLVEKKQTIA
                     IVEQGTGGLLQAELSLALANQPYFSGGKVIGQLGTGLGWLSEDADRIRQELQADLGLA
                     VSVLIKPESTEDNVLAKVYLTLATPSGISQKEIDLGGYSWQYLRQLACLQAWNFVRNT
                     L"
     gene            complement(22133..22702)
                     /locus_tag="AC1PJC_001018"
     CDS             complement(22133..22702)
                     /locus_tag="AC1PJC_001018"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HIP6620014.1"
                     /translation="MSRCAWVNPNNPLYIAYHDEEWGKPLHDEQALFELLCLESYQAG
                     LSWEIVLNKRLAFRSAFFDYDIKKVATMTDSELDSRLTNPDIIRHKAKLYATRANAQA
                     FLRVQEEFGTFDTYLWEWVNFTSIDNPVKSFRELPTKNDLSERISKDLKKRGFKFVGP
                     VCIYSYLQAAGLLNEHEETCEIGKKLRTN"
BASE COUNT         6419 a         5102 c         4328 g         7440 t
ORIGIN      
        1 ctcaattatt ctatcatctt ctgatggtct tgtcaacact ttttcgaaac tttttttcgt
       61 tcctctgtta actagccctt catgagacaa ctcaattatt ctatcacgac ttatatacat
      121 tgtcaaccgg ttttttggga tttttttgga tttttttatg aaaaactgag aggcatacta
      181 atcggagatt gtatattttc ttcgtatgcc tgcagtatat caattgcttg caacagtatt
      241 tatgtttttt gtgaaaatct atggctacct actcatattt tagtagactg tcacagtgcc
      301 ccagagtcat caattaatga agtgtacagt ggagttaaat atttttcttc actgtatcct
      361 ctcaaaagga gagcttcatg tgcacaatct aataatgtct tagaaaaatc tttcaccatt
      421 ctttgttcta aatcagacag tttttttctc gaaaattgtc tacgtagctt tgaataatct
      481 ctgccaaatt ctataaaaaa ctctgtactt tctagaattt cttccaattt cacgagattg
      541 gcgagcagac ctaaatgaag ggctatggga gcaaatgttg tttcaaatgg ttgtgtacat
      601 gtacttcgaa attcaatagt tcctcgcttg gtaagctcct gatagtggta tgagcgatgg
      661 tttttgaaat catctgcttt cggaacaaag taacatatct cgccagtttc tgaatacgct
      721 gcaaattttt cttgctcaaa aaaagattta acagtaattg gtttaaaata ataatagcag
      781 ttatccctga tgacataaaa cattgcggac tcttcttggt attgacgata ttctgcctca
      841 gtttgaaatt cctctgagta gataccaacg ttattcttta agaggccatg cattgaatat
      901 tcccaaaaat aatccctagt aagggccata tcatccatat gatcgaatgg tgaatttgca
      961 aacaaaaacg ccttcgctgc ttcaatttta ttaaacgcat taatgactcg taaaaaggat
     1021 tttcgactca catcaaactg cacttgattt ccgcaaataa agccagcata tccagtatag
     1081 ggatgcatat taggtttgcc ttctcctagc ttgagatagt tcatcaacat cctatatcgg
     1141 cccgtatcta ccggtctatt gtcattgttt tccaaattgg gatttatccc taacccctgc
     1201 aattcgtgtc cattttggcg caaataatat tgaatattct ctagatattc tttatgacgc
     1261 tcttctacac taccaatatt ttttgctttt gcgaatgcaa attctagtgt attatacgtg
     1321 acttcaaata gtatgaggtc tcccgactcg tgctggagtt ctatcggatt tcctctatca
     1381 tctcttttga cgatggtaaa cccattttga ttagaaatat gtcgcatcat atctgtagcg
     1441 acttgaatag aagttgcttt ccctgagata ttaactatcg gatattctaa ttctacacct
     1501 ataaacaatt ctggcttttc tttaatgtta gcaaaatagt attcttcaaa acaattgcct
     1561 atggatattc tatcttctct attcatttta taagtatatc aaaatttttg agtaaaataa
     1621 aaacgcctgc ttacgaaatt attctatctt agagtaattt cgtaaacaag cgtccaatca
     1681 acatgatgag tgttaccgct gagacaagct cagcggtaga ccagagctag actaagaatc
     1741 agaataggat tccatcatca taacactcaa caaaattgat gatcttatac aagttcgata
     1801 attgccattg gtgcagcatc accacgacgt ggttcagttt taaggatacg agtatatcca
     1861 ccattacgtt ctgcataacg aggtgcaatt tcagagaaca atttttgaag tgctgtagta
     1921 gaagtgtact tatcagttgc ttcatcatag ttttcagatg caatttcgtt acgaacaaat
     1981 gctgctgctt gacgacgtgc gtgcaaatca ccacgtttac caagtgtgat cattttttca
     2041 actgttttac ggatttcttt agcacgagct tcagttgtaa cgattgattc gttgatcaaa
     2101 aggtcagttg tcaaatcgcg caacattgct ttacgttgtg agctagtgcg tcctagttta
     2161 cggtatgcca tgatttcctc ctatattatt tatctttttt caatcctaga ccaagatcag
     2221 ccaatttaac tttaacttct tcaagactct tgcgaccaag attgcgcact ttcatcattt
     2281 ctggctcagt tttctctgtc aagtcgaata cagtgttaat gcctgcacgt ttcagacagt
     2341 tatatgagcg aacagataga tccaattctt caatcgtacg atcaagcata cgatcatctg
     2401 aagccacttc agcttctttc atcacttctg cagattttgc aacttcagtc aagtcagtga
     2461 agagacctaa gtgctccatc aaaatgcgtg cagaaagacc taaagcatct tctggaataa
     2521 tggtgccatt tgtgttgatt tcaagtgtta atttgtcaaa accatcgttg ctaccaacac
     2581 gagctggttc aacttgataa ttgactttct tcactggcgt atagatagaa tctacagcaa
     2641 gtgttcccac tggtgcatca tctttcttat taccctcagc tggtacataa ccacgacctg
     2701 aattgacagt caaaacagct ttaaaagtgg cgccatcagc aatggtaaag agataatggt
     2761 cagggtttac aatttcaatg tcactatctg taagaatgtc tcctgctgtt acttcagctg
     2821 gacctactac atcaagttca attttctttt cgtcttcgac ataagatttt acagcaatgc
     2881 ctttgatgtt aagaataatt tgcataacat cttcacgaac acctggaact gtgtcgaatt
     2941 cgtggagtac accatcaatt ttaatcgatg ttactgcagc acctggaagt gaggcaagaa
     3001 gtacacgacg aagagagtta ccaagagttg taccgtaacc acgttctaat ggttcgatta
     3061 caaatctgcc gtaatcttta ttttcatcaa tttttgttat tgttggtttt tcaaactcaa
     3121 tcatttctta ctccctctta aacgaaaagc tgtgtatgga atgtatgatt atacacggcg
     3181 acgttttgga ggacgagcac cattgtgtgg tacaggagtc acatcacgaa ttgctgttac
     3241 ttcaagacca gcggcagcaa gagcgcggat agcagactca cgacctgaac ctgggccttt
     3301 aacggtaact tcaactgttt taagaccgtg ttcttgtgca gatttagcag ctgcttctga
     3361 agccatttga gctgcgaatg gtgtagattt acgagaacct ttgaaaccaa gagcaccagc
     3421 tgatgaccaa gcaatagcgt taccatgcac atcagtaatc ataacaatag tgttattaaa
     3481 tgtagcgtga atatgagcaa taccagattc gatattcttt ttcacacgac gtttacgtgt
     3541 tggtttagcc aatttttcta cctcctatat tattttttct tacctgcaat cgcaacagct
     3601 ttacctttac gagtgcgggc attgttttta gtgttttgtc cacggacagg aagtccacga
     3661 cggtgacgga taccacggta tgaaccgatt tccatcaaac gtttgatgtt caagttaact
     3721 tcacgacgga ggtcaccttc aactttgatt gcatcaactt cacgacgaat agcatcttct
     3781 tgatctgatg tcaaatcttt cacgcgtaca tcttctgaaa tacctgcagc tgcaagaatt
     3841 tttttagatg ttgcaagacc gataccataa acataagtta atgaaataac tacacgtttg
     3901 tcatttggaa tgtcaactcc agcaatacga gccatgtttt ctcctttcta tttcttaacc
     3961 ttgacgttgc ttgtgtttag ggtttgctgg gcaaatcacc ataacacgac cattacgacg
     4021 aataactttg cagtattcgc aaattggttt gaccgatggt cttactttca tgtttaatcc
     4081 ctccaagtat ttcgactatt taaagcggta tgtgatacgt ccacgtgtca agtcgtatgg
     4141 actaagctca acagttacgc ggtcaccgac caaaatacga atgtagtttt tacggatttt
     4201 acctgaaaca gttgcaagga cttggtgtcc gttctccaac tcaacagtaa acatagcatt
     4261 tggcattgta tcgactactt tgccttcaat ttcaatcaca tcttcttttg ccatgcaaaa
     4321 gtaacccctc tctaaatatc gatttgatgt cctctgaaca cagaggtaac aattataagt
     4381 cagactaggc tattttatca tctttgtata aaaaatgcaa gccaaatcta ttagtttatt
     4441 gcaattttga tagtactgta tcaattgctt ggaaaacaag gtcaatgtct tggtcacctt
     4501 caatatcatg gaccagccct tttgcacgat aatgatcaat gattggctgt ccttgtgcga
     4561 tattgacctc taaacgacgt ttgacagatt ctggcttgtc atcttcacgt tgatagaagt
     4621 cttcctcttt gtagtctcca acaggtggat tgaatacttt gtggaaagtc tctccggttt
     4681 ctttatgaat aatacgaccg ctgagacgct ctaccaattt tgaaggatca atctcaatat
     4741 tgataacacc ttgcaactca attcctaagt cagccaaatt ttcatccaag gcatgggctt
     4801 gttcaatcgt acgaggatag ccatctagta aaaagccttt ttccttgatg tcatcctgaa
     4861 ccaaacgttc tttgacaatg ccattagtaa cttcatcggg aacgaggtca cccttatcaa
     4921 tgtacgactt ggcaagaata cccatttcag tctgattggc cattgctgca cggaacatat
     4981 ctcctgttga gatatgagca acattgaatt tctcaacaat cttggccgct tgtgtccctt
     5041 taccagcacc tggtaaaccc ataattaaaa gattcatgac aaactcctta ttttgttttc
     5101 acataaattt gccattattg acaaacttat ctaaaaacaa aatagaaggt tgactaggtc
     5161 aacctatatt ctattctgta atttctaaga aacctacata ttttctctta agaaggtagc
     5221 cttctaattg cttgatgcct tcgatacttg tagagattac gataatcaaa cttgtaccaa
     5281 ggaacgcaat gcttgaagaa agcccaaaga gattttgcgc aaggataggc aacaaagcta
     5341 caaaactcaa gaagagtgca ccgattactg ccaatcttgt caataatttt gacaaaaact
     5401 gttcagtgcc attaccagga cgaactccat ggatataggc tgcacttttc tgaaggcttt
     5461 ctgcagtctt ctcaggattt acttgaacaa aggtgtagaa gaatgtaaag gcaataatta
     5521 aacctgcata tacaatcata cctttagcag ttgagtaatc aaagtattcc tgaaccgtca
     5581 ataaccaccc ggcactctta ttttgacttg cgaaatattg aatcaaagaa gttggaactg
     5641 cagtgattga gcctgcaaag attacgggaa taactcctgc tggattcaat ttcagcggta
     5701 aatatgagct agaaggtgct ccttgtgcac gttttgtata ttgaattggt aatttgtatt
     5761 ctgcttgttg tacaaaagtt gtaaaataca caacaaagaa tattaatacg acgagtgcag
     5821 caacaaagat tgctgactcc cccaaacgac ttgattcaat attaacaaag cgatcaatgt
     5881 aaatctcgtg aaaagttcct ggtagtgatg aaatgatacc cgcgaagatg atcattgatg
     5941 taccattacc atagcccttt tcagaaattt gttcccccaa ccaggttaca ataattgaac
     6001 ctgttgtcaa aattgatcca atcaacaaat atgtttgcca atttaatggc atattggtca
     6061 actttgcacc agacaaggca ttaaagcctg ctgtaatacc aatagattga acaaatgcca
     6121 gtaccaaaga aatgtagcgt gttgcctgat tcagtttacg acgaccaact tcaccttgct
     6181 taccccattc aacaaattta ggtaaaatat ccatctgtaa aagttgaaca atgatggaag
     6241 ctgtaatata aggactaaca cctagtgcga aaactgagaa attacgcata gcatttcccg
     6301 aaaccaagct caacatgttc aaaaatggaa catttgacaa ggcttcaaga ctctttgcgt
     6361 ttactcctgg tactgtaatg tgggttccta cgcggaagac aaaaaggata aagatagtaa
     6421 atagaatttt actacgtacc aattttacct ttaaggcatc ttttaaaagt ttaaaaaaca
     6481 taggctgtca cctcttagat gacttctact gagccacctt tagaagtgat tgcttcttca
     6541 gctgatttag agaatttagc agctttaact gtcaatttct tcgtcaattc accattacca
     6601 agaattttaa ttcctgattt ttcagcttta acgattccag cttcgataag cacaactggt
     6661 gttacttctg caccatcttc aaaagcgttc aattgatcaa ggttaacgat tgcgtactct
     6721 ttagcgttga tatttgtaaa tccacgtttt ggaagacgac ggaacaatgg agtttgtcca
     6781 ccttcaaaac ctgggcgaac accgccaccg ctacgagctt tttgaccttt ttgaccacgg
     6841 ccagatgttt taccgttacc tgatgatgta ccacgaccta cacggttgcg gactttacga
     6901 gaacctgtag caggttgtaa ttcatgaagt ttcattatta tttctcctct tttatatgct
     6961 agcgcctgtg aagtacaaga gtcttcctcc acaaactcgc tgtatgtaaa tatgtaaaat
     7021 ggactagaag tcgcaaagat ttctctatgc gacttagtct atttgttaga ttatttaact
     7081 tcttctacag ttaccaagtg agagatagcg ttaaccattc caagaatagc tgggttatct
     7141 tctttaacaa ctgaagagtt caatttacca agtccaagtg caacaactgt tttacgttgt
     7201 tctggtttgc gaccgattgg agacttagtc aaagtgattt taatttgagc catgagtatc
     7261 tcctttctta tgctaaatca gaaactgaga tgccacgaag tgcagccact tcttcagcac
     7321 gtttcaattg tttcaaacct tcaactgttg cgcgaacgat gttgattggt gtgtttgaac
     7381 caagtgactt agaagtcaca tctgcgatac ctgccaattc gattacggca cgagttgcac
     7441 caccggcagc aaccccagaa ccttctgaag caggtttcaa caatacacga gcgccgccaa
     7501 attctgagcg aacttcgtga gggattgttg taccaaccat tggtacttca atcatgtttt
     7561 tcttagcaga ttcaactgct ttacggatag cttctggtac ttcttgagct ttaccagtac
     7621 cgaaacctac gcgaccgtta cggtcaccaa caaccacaag agctgcaaaa cgaagacgac
     7681 gtccaccttt aacaactttt gtaacacggt tgatggctac tacgcgttct tcaatttcaa
     7741 ctgcgttatc tttgaatgcc atttcttagt gtcctcccta ttagaatttc aatccgtttt
     7801 cacgagctga ttcagccaaa gctttcacac gtccgtgata gagatatcca ccgcggtcaa
     7861 agaccacttc agaaatacct ttagctaccg cgcgttcagc aacgagttta cctacaacaa
     7921 cagcttgttc tgtcttagta ccttttgaaa cttctttatc aagagtagaa gcgcttgcga
     7981 gcgttacacc cgctacgtca tcaatcactt gagcgtagat gcctgtatta gaacggaaaa
     8041 tgttcaaacg tgggcgagca gcagttccag agattttacc gcgaacgcga cggtggcgtt
     8101 tttggcggat tttgttttta tctggttttg aaatcacaat attcacctct taatgtatga
     8161 ttctgtttct tgcgaaacaa tttgagaaat agtcagccag gtggctaagc cacctcagca
     8221 agctattatt tacctgtttt accttcttta cggcgaacga attcaccaac gtagcggata
     8281 cctttacctt tgtatggctc aggagcgcga aggctacgga tgtaagctgc tgtttgacca
     8341 acaacttctt tgttgatacc agacacgacg atttgtgttg gtgttggaac ttcaaatgta
     8401 ataccttctg gtgcaaccac ttcatctgga tgtgatttac caacagcaag tgtcaatttg
     8461 ttaccagcca attgagcacg gtaaccgaca ccacgcattt caagttcttt tttgaagcct
     8521 tcagaaacac caacaaccat gttgttgagg ttagcacggc tagtaccgtg aatagtcttc
     8581 atttcttttg aatcgtttgg acggtgaaga gttacttctg cgccttccac acggatttca
     8641 atagcagttg ggaattcacg agtcaattcc cctttaggtc cttttacagt taccacgccg
     8701 ttgttttgag caagctcaac gccagcaggc aatgtaatta ctttattacc aatacgtgac
     8761 atatttttaa attctcctgt taaattatca agccgtcaag cgactagttt tcacggggga
     8821 ctcacttaaa cactgacttc agcccgtgtt cgaatgagca ggttttatga taccttcaaa
     8881 tcagattatt agatttgaac ccgagctgtg acctgtgtga aaaagataaa tcaaacttga
     8941 atgcaagcat tcttcgtttg atttcctatt ttcacttggg tcactacgct cttggtatca
     9001 tccaattacc aaacgtatgc gataacctca ccaccaacgt tcttttgacg agcttgtttg
     9061 tcagtcaaaa gaccttctga tgttgagatg attgcgatac caagtccgtt aagaactttt
     9121 ggaatatctt cacgttttga gtaaacacga agacctggtt ttgaaacgcg tttcaagtta
     9181 gtgataactt tttcaccgtt tggtccgtat ttcaagaata cgcggatgat accttgtttg
     9241 tcatcttcga tgaattcaac gtttttcaca aaaccttcgt ttttaaggat tgtagcaata
     9301 ccttttttga tgtttgatgc aggaacttca agcacttcgt gtttagcttg gttagcgtta
     9361 cgaatacgtg tcaaaaaatc tgcaattggg tcagtcataa ccatttgttg tttctcctct
     9421 tactagtagt ttgatctagt cacttgctag ttaatgatgt ccttgcggac tagtgataag
     9481 tgtatataga ataagttgct agtcctaagc aagtctagga agcacttcgc aggcagtact
     9541 agcgtacggc aagaagtgct gacgacgaat tgcaacggaa tagcaagtta ttcttaccaa
     9601 gaagcttttg ttacgccagg aatttgtcca aggtaagcca agtcgcggaa gcatacacgg
     9661 cacaatttga atttgcggta aactgagtgt ggacgtccac atttttcaca gcgtgtgtaa
     9721 gcttgtgtag agaacttagc tgggcgtttg ttcttagcga tcattgattt tttagccatt
     9781 tattctctcc ctcttatttt gcaaacggca taccaaggcc agtaagcaat gcacgtgatt
     9841 cttcgtcagt gttagcagtt gtaacgataa cgatatccat accgcgagtt ttatcaacat
     9901 cgtcgaagtt gatttctggg aagatcaatt gctctttcac accaagtgtg tagttaccac
     9961 gtccgtcaaa tgacttagtt ggtacaccgt ggaagtcacg tacacgtgga agtgaaactg
    10021 taaccaattt gtccaagaat tcatacatac gttcgccacg aagagttact ttcgcaccga
    10081 ttgcaacacc ctcacgaaga cggaagccgg cgattgattt cttagcttta gtgataagtg
    10141 gtttttgacc tgagatcaaa gctaattctt gagcagcttt ctcaaggttt ttagcgttag
    10201 aaacagcgtc accaacaccc atgttcaaaa cgatcttatc aacttttggc acagccataa
    10261 ctgaagaata gttaaattgt tcagtcaaag caggaactac ttcattaaga tatttttctt
    10321 ttaaacgatt tgccattata cttctccttt ccttcgtgat taatcaagca cttcgcctga
    10381 ttttttgttg tagcgaactt ttttgccgtc tacaaacttg taaccaacgc gtcctgcaac
    10441 accatttttg tcaagaactt gaacgtttga cacatggatt ggagcttctt tttcaacgat
    10501 agcgccttga gggttttcgc tgtttggttt ttggtgtttc ttaacgatgt taacaccttc
    10561 aacaataact ttgtttactt ttggaagtgc tgttacgaca actgcttcaa cgcctttgtc
    10621 tttaccagcg attacgcgaa ctttatcgcc tttttttaca aacatttgat ttctcctata
    10681 atttcttacg ccctaatggg caccctggtt agtgatttaa ccaggggact tagtttgttt
    10741 tctagtttac taaatccgtc acagacttcg ttagtttgtt ttgatgtacc caagtactat
    10801 ctgcaacaaa ctacctagtc tgtaacaaat ttcctaaaac tttttgatta aagtacttct
    10861 ggtgccaatg aaacgatctt catgaaaccg ccatcacgca attcgcgtgc cactgggcca
    10921 aagatacgag ttccgcgagg gtttttgtct tcacggatga taactgcagc attctcatcg
    10981 aatttgatgt atgaaccatc agcacgacga gcacctgtct tagtacgaac gataacggct
    11041 ttaacaacgt cacctttttt aaccgcacca ccaggagtag cttgttttac tgaagcaact
    11101 atgatgtcgc cgatgttcgc gaatttacgt cctgaaccac caagaacttt gattgtcaag
    11161 atttcacgtg cgccactgtt gtcagcaact ttcaaacgag tttctgtttg aatcatgtca
    11221 attttctcct ttcaggttga ttaaatgata actgcctctt ccacaacttc tacaagacgg
    11281 aaacgttttg tagctgaaag tgggcgagtt tccatgatac gaacgatatc gccttcttta
    11341 gcaacattgt tttcatcatg agctttgtac tttttagagt agttaatacg tttaccatag
    11401 actgggtggt tacgtttagt ttcaactaca actgtgattg ttttgtccat tttgtcagat
    11461 actacgcgtc caacaagaac tttacgatta ttgcgttcca ttgaaattct cctttcccaa
    11521 tctattattt agtttcagat tgcacagttt tgatacgcgc aatttgtttc ttcacttcgt
    11581 tcaaacgagc agtttgctca agttgaccag cagcagcttg gaaacgaagt tcgaagagtt
    11641 ctttcttcaa ttcgttttct ttcttagcaa gttcttcttg agaaaggcca cgaagttctt
    11701 ttacaaaatc tttaatttct tgaagtttca tgtcttctcc ttattctgct tcacgtttta
    11761 cgaatttaac tttaactggc aatttgtgac cagcaaggcg gaatgcttcg cgagcgattt
    11821 cttcagaaac gccagctact tcaaacataa ccttaccgcg tttaactgga gctacccaac
    11881 cttcaggagc acctttacca gaacccatac gtacaccgat agctttagca gtgtatgatt
    11941 tgtgtgggaa gatcttgatc caaactttac caccacgttt catgtaacgc gtcatagcga
    12001 tacgggcagc ttcgatttgg cggtttgtaa tccatgagct agtagttgct tgaagaccgt
    12061 attgaccaaa gtctacttgt tttccacctt tagcttcacc gcgcattttt ccacggaatt
    12121 cacgacggtg ttttacacgt ttaggtacta acatttgtta tttacctcct ttagtgtttt
    12181 tacgagctgg aagaacttca ccacggtaga tccatacttt aacaccaagt ttaccgtaag
    12241 ttgtcaaagc ttcttcccaa gcgtagtcga tatccgcacg aagtgtatga agaggaacag
    12301 ttccttctga gtagccttct gcacgggcaa tatcagcacc gttcaaacga ccagaaactt
    12361 gtgttttgat accttttgca ccagcgcgca ttgcacgttg gatagcttgt ttttgagcac
    12421 ggcggaatgc cacacgttgc tccaattgac gagcgattga ctcaccaaca aggtgtgcat
    12481 ccaaatcagg ttgtttgatt tcgatgatgt tgatgtgtac ttgcttacca gtcaatttgt
    12541 tcaattgagc acgaagtgca tcaacgttgc taccagcttt accgataacc atacctggct
    12601 tagcagtgtg gatagaaacg attactttat ttacagcacg ttcgatttcg attgttgatg
    12661 ttgacgcatc agccaattct tttttgataa agttgcggat tgcaagatct tcatgaaggt
    12721 aatccgcgta ttctttttca gcataccatt tagcatccca atcacggatg atgccaacac
    12781 gcataccaat tggatgtact ttttgaccca cgtttttacc tccttatttc tctgccacaa
    12841 ctacagtgat gtgagctgtg cgtttgttaa ttggtgaagc tgaacctttc gcacgtggac
    12901 ggaaacgttt caacgttggt ccttcgtttg cgaatgcttc gctgactacc aagttagctt
    12961 tttccaaacc aaagttgttt tcagcgttag cgattgctga gtttaaaact ccctcgataa
    13021 tgcctgcagc tttgtttggt gtgaatttca agattgcgat tgcgtctgct acgcttttgc
    13081 cacggatgtt atccaagaca agacgtgatt tacgaggtga aacacgtact gtgcgagcag
    13141 ttgctttagc tgaagtaatt tctgccattg tgttttcctc ctaaattatt tacgacgagt
    13201 tttcttgtcg tcagcagcat gacctttgta agtacgagtt ggtgcaaatt caccaagttt
    13261 gtgacctacc atgtcttctt gaatgtatac aggtacgtgt ttacgtccat cgtaaactgc
    13321 gattgtataa ccgatgaaac ttgggaaaat cgttgaacga cgtgaccaag ttttaattac
    13381 ttttttcttt tcgtcgtttg cttgagcttc aacttttttc atcaaatgct catcgacgaa
    13441 aggtcctttt ttaagactac gtcccatttt agtgttttct cctttaaaat atgtaccaca
    13501 gcggcttgcc cgctttgcgg gctaccgagt tggcggatga tataaaatgc tatgcaacta
    13561 agaatagatt atttttggtt gcgacgacga acgataagtt tgtcagattt agctttcttg
    13621 ttacgagttt tcaaaccaag agctggttta ccccatggtg tagatggtgc tttacgacca
    13681 actggtgctt taccttcacc accaccgtgt gggtgatcgt tagggttcat tacagaaccg
    13741 cgaactgttg gacggatacc tttccaacgg ctacgacctg ctttaccaag gttaacaagg
    13801 ccatgttgtt cgttacctac agtaccaaca gtagcacggc aagtaccaag gatcatacga
    13861 acttcacctg attgaaggcg aacaagaacg tatttacctt cttgaccaag aacctgtgca
    13921 gatgcaccag cagcacgaac caactcacca ccgcgacctg gtttcaactc gatgttgtga
    13981 acaacagtac cgactgggat gtttgcaagt ggaagtgcgt taccaacttt gatatctgct
    14041 tctggacctg aaacgatgcg ttgaccaact tcaagacctt taggagcaat gatgtaagct
    14101 ttaacaccgt ctgtgtagtg tacaagagcg atgtttgctg aacggtttgg atcgtattcg
    14161 atcgttttaa cgattgcttc aacgccatct ttgttacgtt tgaagtctac caaacggtag
    14221 aaacgtttgt gaccgccacc ttggtgacga acagtgatgc gaccgttgtt gttacgacca
    14281 gctttgctct tcaaagcaac aagcaagctt ttttctggag tgcttgttgt gatttcagcg
    14341 aagtccaaag aagtcatgtt acgacggcca tttgtcgttg gtttataaac tttaataccc
    14401 acgttaattc ctcctttgat tattcagcgt cagctgtagc gaacaattcg atcgcttttg
    14461 aatcagcagc caatgtgatg attgcttttt tcactttgtt tgtgcgacct acataacgac
    14521 ctacgcgttt tgttttaggt ttcacgttga ttgtgttaac atttgcaact ttaacaccct
    14581 cgaatgcagc ttcaacagct tgcttgatta agagtttgtg tgcacgagtg tcaacttcaa
    14641 atacatactt gcctgcttcg agttggccca ttgagctttc tgtgatgaca ggttttttga
    14701 taacatcata caaattcatt atgcaagaac ctcctcaatt ttagagatag ctgcttgagt
    14761 tacaagaagt ttgtctgcat ttgcgatgtc aagtacgctt gcagttgttg cagttgcaac
    14821 tttaactcct gggatgttac gagcagagag agctgcgaat tcgttgcctt cttcaagaat
    14881 aacaaggact ttagaatcaa tgctcaatgc tgcaagtact tttgcaaatt cagcagtttt
    14941 tggagctgtg aattcaagtg agttaacagc tacaaatttg ttttcagcaa ctttttctga
    15001 gtaaacagat ttaagtgcca agcgacgaac tttttgtgga agtttgtacg cgtatgaacg
    15061 tggagttggt ccgaagacta cgccaccgcc acgccattgt ggtgaacgaa tagaaccttg
    15121 acgagcacgt ccagttcctt tttgacgcca tggtttgcgt ccgccacctg agactgctga
    15181 acggttttta actgcgtgag taccttgacg aaggctagca cgttggctga tgatcacatc
    15241 aaatacaact gcttggtttg gctcgatacc aaagatcgca tcgttaagaa ctacttcacc
    15301 agcttgttta ccagtttggt caaataatgt tacgtttgcc atttcgactg atttcccctt
    15361 tccttattat ttaccagctt taactgctga cttgatagtg ataagagatt tcttagcacc
    15421 tggtacgtta cctttgataa ggataacgtt cttttctgga acaacttgta caacttcaag
    15481 gttttgaatt gttacacggt tgccgcccat gcgacctgca aggtttttac ctttgaatac
    15541 acggttaggt gcaacaggac ccatagaacc tggacgacgg tggtaacgag aaccgtgagc
    15601 catgggacca cgtgattgac catggcgttt gataacacct tggaaacctt tacctttaga
    15661 tgtaccagtt acatcaacaa catcaccagc tacgaaagtt tcaactgtaa tttcttgtcc
    15721 aacttccaag ccttcaatgt ttttgaattc acgaatgaag cgcttaggag ctgtgttagc
    15781 tttagctaca tggcctttgg caggtttgtt gctcaatact tcacgtttgt catcaaaacc
    15841 aacttgaact gccgcgtaac cgtcagtttc aactgttttc acttgaagaa caacgtttgg
    15901 agttgcttcg atgacagtaa cagggataaa ttcaccagat tcagtgaaga tttgagtcat
    15961 tcccactttt ttccctaaga ttccttttgt catgagaaaa atattccttt tcttatttta
    16021 tagttaaaaa gtttttaacg agcgtttttc atgctcaaac caagatacaa agggcgtcaa
    16081 actcaaagtg aaaataggaa acttgacgaa gaaacttctg tttctaggaa agtttatctt
    16141 tttcacacgg agtttagccc gtgttcaatt atgaacactt gcttttagtt taccttgcta
    16201 cttgattaca atttgatttc tacgtttaca ccacttggaa gatccaattt catcaacgca
    16261 tcaactgttt tttgagttgg gttaacgatg tcgatcaaac gtttgtgtgt acgcatttcg
    16321 aactgctcac gagaatcttt atacttgtga gtcgcacgga tgattgtgta gaggctacgt
    16381 tctgttggaa gcggaactgg acctgctact tgagcacctg tacgtgttgc agtttcaacg
    16441 atttttgcag ctgctgtatc aagtgtacgg tgttcgtacg ctttcaagcg gatgcgaatt
    16501 tttttgtttg ccatcttttt ctccttttcg tctatttaac ataataggct agctccacaa
    16561 gaaaaccaac acgtgttgcg tggcaatgca accgagcgtg tcgcaacctc ttgcatcaaa
    16621 gctacagccg tattttttac ggcactagaa cattctacca gattctactt gccattgcaa
    16681 gagtttttac tcaaaaattc aaaaaatccc aaaactttta tttcaggatt cttcattact
    16741 tattttttat ttgagttaac tatcaacgtt tttttcaaat atccttgtaa gtctcaaatt
    16801 atttttttga ctgccagtaa aactctgtcc gcttatcaat ttttcatatt ttcaagtcgg
    16861 tcattgatta aattttttcg ataatctctc aggagacccc ataacatcag caactcatca
    16921 ttacccaagc tcggtgattg aatcaaacca tgaatatctt catggaggag acgatcaaat
    16981 ttacgttttt gactttccta ttacgaatta tagcctcgat atggtttcta aatttaacct
    17041 tgaagtagca atatagccta cctaagtttc taaccttcaa acaaaccgtt tcaaattcca
    17101 taacatagtc tcccgtagtt gattgtttta gtttataaaa aaatactgtt tttggcctac
    17161 ttacttggtg ggagttaggt ctcttttact gttagcgata gccacctctt tttccactgt
    17221 ttcttaagaa ttctttgtcg atacaattcc atgcgattag gatccgctaa gaaatgtggt
    17281 gttggccgta cttggtaagc ataaatgtca tccaatccaa aaggagcaaa tatttctaat
    17341 ttatttcttt ctgttcgaca aatacctatc gctgtgcatc tttctggaaa tttttcaatc
    17401 gcatcccttg atgattgata cggtttagta ttcggactat ggatatgcat atacacttga
    17461 ttttttaatt cccatcgata ggatggatag ttttgatata aatcgctttc tatttccatt
    17521 gtctcttcat aagaaatatt ttcatcaaaa aacacaagat caacatctgt ttcttcatca
    17581 aaactgtatt gattccaaat gaaattacgg atagttcccg cacagagcca gcaatctgat
    17641 aaattcagtc tatccattat gtctaatatg accaaaatat ttttatcagc cagtagacgc
    17701 ctctctaatt cctcactcag cctcttactt ctttctgtaa aactatcttt catctggcct
    17761 cccttttgat tttctgcctc atgatccatt cctcgccttg ctgtttctta actcaggctg
    17821 aaacagtctc ccccagactg cttcactcca ccggacctta attcgctttc ttgttttcag
    17881 gctcatgata aaaaggtcca ctggacctta attcgctttc ttgttttcag gctcatgata
    17941 aaaaggacca ctggaccttt ttattcctct tccataaagc tgttgaagac ttcttcaatc
    18001 atatcccatt ctgctgttgc gtcttctggg ataggttgca aatcgccttc tgtgccattc
    18061 tcattctcga tgtatgagta ggcttggatt tcaacttctc cgttctcatc ttcttctgca
    18121 cttgcaggaa tcaagagaac atagttctta ccaaactctt cttgaccgtc aatcgtcaat
    18181 aagatttcaa aaagtgtttc gttaccttgg tcgtctacca aagtaattaa ttcacgttcg
    18241 tcgtggttgt ggtcgtgttc atggtcatga tgatgtgcca ttagaatctc ctttaaaatg
    18301 ttctatctaa ataattttgt aaaatcagct gagctgctaa tttatcgata actttcttgc
    18361 gttttcctcg gctgatatcc gcttgctcaa tcagcatccg ttctgctgca acagttgtta
    18421 aacgttcatc ctgataatca actggaagtt tgtaacgctc agtcaataaa tcaccgtaag
    18481 cttgactagc ttccacacgt ggaccactag tattattcat attcttcggc aagcctacaa
    18541 caaatttatc aaccttgtac tgttctacaa gttcggtcaa acgctccaga ccgaattcgc
    18601 ccttttcttc atcgattggg atgatttcca acccttgggc cgtgaaacct aacggatctg
    18661 aaatggctac accaactgtc ttggaaccga cgtctaatcc cattattctc attagaggtc
    18721 aatcccattc cctttcaaat agtagcgcac caattcttca atgatttcat ctcgttcatg
    18781 cttacgaatc tgattgcggg catcattata gcgaggaata taagcagggt ccccacttaa
    18841 tacatagcca atgatttggt taatcggatt atagcccttt tcctctagcg aacgataaac
    18901 actagtcaat gtcttgctga tttcttgttt atctgtatca tctaggcgaa aacgaacggt
    18961 ttcttcggta aatcccatac ttacaccttc tttccctatt ttttacatta tatcacaaat
    19021 tttaattatt ctcaaaaaat gcgcaaaaag aaccccaaaa gagtcctttt gtacatctta
    19081 tagagctgct ctcatacgag cttgagcatt ttcaacattg cgcactgcac gtggcaagaa
    19141 agcgcgtata tcatcttctt tatagcccac ttgaagtcgt ttctcatcaa tcaagattgg
    19201 actcttcaaa atacgtgggt tagaggtaat taaatcaatg acctcgttca cactcaactc
    19261 ttcaatatca aagtccagac tctttgcata acggtttttt gacgatacga tacttgcaat
    19321 accattctct gtttttgtta agatgtttag gatttcttct ttagtaatgg cttccttcgc
    19381 aagattatgc tcattataag ataattggtg agcatttaac caatttttcg ctttcttaca
    19441 agaagtacaa ctagatacag tataaatttt aatcatgtag tcactccttt gctacatttt
    19501 attaagcaca ttatagacta ttatatcata aattccctcg gtctgcagac ctatttttta
    19561 aaaaaacttt aaattttggg gtaaaaattc ggtttttatt agaaaaaagc ctggaatctc
    19621 cagacttttt cgttcttata ctaaacaact tcctacatac ccataacaga tatgtatcaa
    19681 tggttcaata ttaaatctat tttgttagga attaatcttc taattcaata ccgccatcaa
    19741 gatctaggat aacatcttgg atttcttccg caacaacagg agcttcttcg gtcgcaactt
    19801 cttcaactcc atctgcttca atcaatccat aatgaacacg aatcttgcgg tcaatttcat
    19861 caaagattgc tggattatct gctaagaatt tcttagcatt ttcagaacct tggccaattt
    19921 tttctccatt atatgaatac caagcacctg ctttttggat gatgccgagg ttgctaccaa
    19981 tctcaatcaa ttcacctgtg cgagaaattc cttcaccgta catgatttca acaacagctt
    20041 ctttaaatgg tggagccacc ttgttcttca caatcttcac cttggtttcc ttaccaacgt
    20101 tttgatcttt cttgtcgcct gttcctttga tttgtgtgtt tccacgaaca tccatacgga
    20161 cagatgcata gaattttagc gcacgaccac caggtgttgt ttcagggtta ccaaacatga
    20221 caccgacttt ttcacgcaat tggttaatga aaatagctac tgtttttgtt ttgttgatgg
    20281 atgcaccgag tttgcgcatg gcctgactca tcatgcgagc ctgcaagcca acatgactat
    20341 caccaatatc gccatcgatt tctgcacgtg gtacaagggc tgcaaccgag tcaacaacaa
    20401 ccaagtcaac cgcaccagag tcgatcagct tgcctgcaat ttcaagacct tgttcccctg
    20461 agtctggctg ggacaagagc aactcatcaa tattgacacc aagagctgct gcataggctg
    20521 gatccaaggc gtgttccgca tcgataaagg cagcaatacc gccatctttc tgggcttgag
    20581 ctactgcgtg tagagcaaca gttgtcttac ctgagctctc tggaccgtaa atctcaatga
    20641 tacgaccttt cggatagcca cccgctccaa gcgcaatgtc gattgacaaa ctacctgaac
    20701 tcatgacttg aactttttgc tcagcacgct caccaagacg catgacagcg cccttaccaa
    20761 aatctttttc aattgatttt agggcatcat ccaacgcttt tttacgctca tcgccaaatt
    20821 tctttgtaat atcttctaat ttttttcctg gtttcttagc caatgatttt ctcctctttt
    20881 cttagtcaaa ctattatagc aaatatctgc tatttcacaa agtgtttcgt acaaaattcc
    20941 aggcctgcag acaagcaagc tggcgaaggt attgccacga ataaccacct aaatctatct
    21001 ctttttggga aatacccgag ggcgtagcca aagtgaggta tacttttgca agtacgttgt
    21061 cctctgttga ttccggtttg ataagcacag acacagccaa acctaaatca gcttgcagct
    21121 cctgtcgaat gcgatctgca tcttctgata gccagcccaa tcctgtccct aactgaccga
    21181 tgacttttcc tccgctaaaa taaggctgat tagccaaagc caaactcaat tctgcctgca
    21241 agagccctcc tgtcccctgc tcgacaatgg ctatggtttg ttttttctca accaaaccag
    21301 tcgctaccgt tttgaccaaa ctattgtcct ctccgtaggc atagaaatag tctgccagtt
    21361 tgtcatgttg taagatttct tcttccaact gattcaaacg tagatttgcc tcttcttggc
    21421 tggtcgcttt ggtggacaag cgtaaagtca cctctccaac ttttgcataa ggagcaagag
    21481 ttgggtctgt ctgcttgtcg atcaagtccg ccaaaacagt cactaactgg ctttcaccaa
    21541 tgccaaaaaa gcgtaggaca cgcgaataaa gttgctgctg agattgggac agtaaaggta
    21601 agagactctc agaaaacatg gccttgagct cacttggtgg gccaggcaaa acaatatagg
    21661 ttacaccatc ttgctcaatc ataccaccaa cagctaaacc agctggattc tgtagcacct
    21721 gacttccctc cacaatctgt gcctgacgtt cattatttgg tgtacggaca cgacctgggc
    21781 gactggcaaa gaaacggtct aattttgcca tagccaactc atcaaacaca agatttctac
    21841 ctaagaaggt cgccaaggtc tgcttggtca agtcatcttc agttggacca agtcctccac
    21901 agagaatgac tagctcgctc cgctgactgg ctacttccag tacagacaga agcctgtttt
    21961 cattatctcc aacagctgtg tggaaataaa catcaattcc cagctctgca catttctccg
    22021 aaaggaactg agcattggta ttaatgattt gacctgtcaa aatctccgtc ccaacggcga
    22081 ttagttctgc tttcatattc ctcctctgtc tagggtgcga ttgctcgctc atctaattag
    22141 ttcgtaattt ctttccaatc tcgcaagttt cttcatgttc attcaacaga cctgcagcct
    22201 gcaaatagga gtaaatacag acaggcccta caaacttgaa acctcgtttc ttcaaatctt
    22261 ttgaaatccg ctcagacaag tcgttcttgg tcggcaattc tcggaaggac ttgacagggt
    22321 tgtcgataga tgtaaagtta acccattccc aaagatacgt atcaaacgta ccgaattcct
    22381 cctgtactcg aagaaaggcc tgagcattgg cgcgggtagc gtacagcttt gccttatgac
    22441 gaatgatatc tggattggtc agacggctat ctaactcgct atctgtcatg gttgcgacct
    22501 ttttaatatc gtagtcgaaa aaggcagagc gaaaagccag acgtttgttg agaacaattt
    22561 cccaggaaag tcctgcttgg taggactcca agcaaagcaa ctcaaataga gcctgctcat
    22621 cgtgaagcgg cttgccccat tcttcatcat ggtaagcaat atagagtgga ttgttgggat
    22681 tgacccaagc acaacgggac atagaaactc ctttttagaa cgcatatcta gatacatttt
    22741 tgaaaaaata gctaaacaca gactaaggac tgtgagaaaa aaattatcag atttctcaac
    22801 ttcacaaaat gacgcagttg acatctggca aaaggcttcg tcaaaactcg ccttttacct
    22861 agttgtcatt gcggaggtct cacaacgaaa tttcttgcaa aatttctgtt cggccgtcta
    22921 ttttctcttt gtcctttacg tcctttgtat ctgaacacga catgagccac aaaaatcaac
    22981 attatttttg cagcgaatta gtaaggtacc taggcaagtc gcaaatagcg attgccgtag
    23041 tgggagcagg aaagaattct acagataaaa aagaattcgt cttccttccc ccgcacagct
    23101 caaaaggttc agtgaacctt ttgaggttgg aaatgaagcg aactctattc gcatcagtcg
    23161 tggaggccag atttgaagtg tgaaacacga acaaatctgc caatcaacca ctgcgctgag
    23221 atgttgactc aaactttgag taataaaaca aaacttttta accatcatac tggtacgtta
    23281 gttgaacac
//
LOCUS       DBNFCX010000030        23249 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.030, whole genome shotgun sequence.
ACCESSION   DBNFCX010000030 DBNFCX010000000
VERSION     DBNFCX010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 23249)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23249)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23249
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.030"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..473)
                     /locus_tag="AC1PJC_001019"
     CDS             complement(<1..473)
                     /locus_tag="AC1PJC_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018369029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIP6620015.1"
                     /translation="MFSASKLKEHRLAKKLSQTAIANELGVTRATLSAWETGKTVPNK
                     KHLGELAQLLHIEASELQEEHPHLTLYKQLNKTNKKKVEELTHDLLLEQKIIPLFSVH
                     VLDNVALSAGHGNDFWDECETKEVFTDREYLYDVATWIDGYSMEPVYQDGEVALIR"
     gene            608..2497
                     /locus_tag="AC1PJC_001020"
     CDS             608..2497
                     /locus_tag="AC1PJC_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015057846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ImmA/IrrE family metallo-endopeptidase"
                     /protein_id="HIP6620016.1"
                     /translation="MAFNSFEKLLQSNYYNDIFKAVDNYIYHQRSEISVKSHTVEDPN
                     FKKLDDFTIKKVLSRKVRDGMIVSELQVIASLEIKGQTKYGYETDSANLWLRVTVEYE
                     LNEGIHDFKILKVIPFDPTDYDKRELGLSPEFVPYIKAAEFDEIAEGILKQYYPQALE
                     VPLALPIDDYLANIGLNKMEGKLTEDSSIFGEMVFKDTEVMFYDGDTPESRLVKKKTI
                     LVDPEVICLRNQGSYNNTVVHESVHWLLHHYYNEYKMLFDKGHKRSSSLKDSSSLSLS
                     SDWSDYDWMEWQANGIAARILMPKSTTKQKVNQLFTDYSLKYTSDEKLTMFERIIDEL
                     AEFFQVSRLAAKIRLQQLGYHEFEGIYNFVGDEYLRSYGCELRAMTENKSFTISFPNA
                     CLLSWKNESFRELMDSGQYVYVDNHFCLNDSRYVTMVEYGVYEMTDYAYQHMDECCLL
                     FDISYKKDKTKSISITIFNEYVMYRGKATVEIEVDFSEFINIVNGAVIPDGGRIFEEV
                     ARINEEMPSGFCGMLVYHRERKGITQEQLVEASGVSLTTLQRFETKRDASRKLEKMMG
                     ITLGMKLYPDFSFKLIEKSGTTFRDDMPTHCAYKMLLWHCYHLGAYECNQKLIEMKIP
                     EFFGK"
     gene            2889..3494
                     /locus_tag="AC1PJC_001021"
     CDS             2889..3494
                     /locus_tag="AC1PJC_001021"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620017.1"
                     /translation="MTIKDKTCQNEYKKHDFSSEKSYNDIPCQEGEILAPMVVRDKAM
                     VKSFQMNSENFKTWRFMGHPVRVAFIPVAQDQFETTMRIFNQDVKECLSRHTKSKLET
                     ISLEKCFEDMDAEGGSGVDPTRTESEVETLMLFETLEELIEEVYRKDQRKGLILKAIY
                     EDMDISKQDIIKRLGLAKTRGYELIKEAHELARETYLELNR"
     gene            complement(3539..5494)
                     /locus_tag="AC1PJC_001022"
     CDS             complement(3539..5494)
                     /locus_tag="AC1PJC_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017769760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HIP6620018.1"
                     /translation="MPIKELSIDIETYCDIDLRKSGVYRYAEDDSFDILLLAVSINHN
                     PVVVYDLTKEDLPNTVLEAILDDTILKWAFHATFERVCLSNWIKKRYPDKLTQDFLSP
                     NSWRCTLIWSAYLGLPLSLEGVGAVLKLDQQKLNEGKELIRYFCIPCTPTKVNGGRTR
                     NLPQHAPDKWQAFITYNKSDVEVEIAIQDKLKNFPVPNFIWAEYQHDQMINDRGISLD
                     EDFVSAAIHIDSISKSHIQEELTALTGLENPNSVLQMITWLREHGVSTDSLDKKAVNE
                     LLKTVDAQTAQVLMLRKQATKSSVSKYQAMTRVICRDKRARGMFQFYGANRTGRFAGR
                     LIQLQNLPQNHLPDLSEARALVKAGDYDSVALLYDVQDTLSQLIRTAFVPTKGKKFIV
                     CDFSAIEARVLSHLAGERWRNKVFEKGDDIYCMSASQMFGVPVEKHGINSDLRQKGKV
                     AELACGYGGSVGALTAMGALDMGLQEHELQPLVDSWRQANPNIILFWWDVDRAVKTAV
                     KEHIKTQTHGLSFEVKSGILFITLPSSRQLAYIKPRMGTNQFGGESVTYEGLVTGKKW
                     ARIDSYGPKFVENIVQAISRDILVYAMKQLKDEAIVAHVHDEVIIEADLDQTVTSISK
                     QMAIAPPWMPDINLRADGYECFFYQKD"
     gene            complement(5729..6277)
                     /locus_tag="AC1PJC_001023"
     CDS             complement(5729..6277)
                     /locus_tag="AC1PJC_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2815 family protein"
                     /protein_id="HIP6620019.1"
                     /translation="MTTKVITGPNTRFSYLNANEPKSINGSTPKYSASLIIPKEDTVT
                     INKIKAAIEQAYKEGESKLKGNGKSVPALSTLKTPLRDGDLERPDDEAYKNAYFVNAN
                     SPHKPGVVDGNRQEIIDTSELYSGIYGRASITFYAFNSNGNKGIACGLNNLQKLRDGE
                     PLGGRTRAEDDFATEDDDDFLN"
     gene            complement(6282..7403)
                     /locus_tag="AC1PJC_001024"
     CDS             complement(6282..7403)
                     /locus_tag="AC1PJC_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000181333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2800 domain-containing protein"
                     /protein_id="HIP6620020.1"
                     /translation="MTNHAILSASASHRWLNCPPSARLTEDLPDTTSDFAIEGTDAHE
                     LCAYLVEKALGRNARDPTEDLTFYNDEMQECAEEYRNYVMEQVEKARGYSRDPTVLIE
                     QRLDFSKWVPEGFGTGDCIIVADGLLQVIDYKHGLGVQVDEDHNPQMMCYALGALEMF
                     DGLYNFDNVTMTIFQPRKHNISTFEMEKAELLEWAENVLAPKAELAFKGEGEMQSGKY
                     CQFCKLKNVCRKRAEDNLALAKMEFADPASLDNEDIAEILPKLDLLISWANDIKAYAL
                     NQATDGHPIPGYKLVEGRSVRKFSDESAVSQAVIEAGFDPYEKKLLTITAMTKLLGKK
                     TFNDLLGGLVVKPSGKPTLVPIDDSRQEMNLAKNEFKEE"
     gene            complement(7396..7719)
                     /locus_tag="AC1PJC_001025"
     CDS             complement(7396..7719)
                     /locus_tag="AC1PJC_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000077671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620021.1"
                     /translation="MSKMKELNRLIHDMEETAKYYLRLVDEFKKLLTTEDETAPKSNP
                     PKNEPQKEIQLEDVRAVLATKAKDGYKEDVRALLNAYGASSLSVLDPKHFAAVLEEAG
                     GIGND"
     gene            complement(7694..7828)
                     /locus_tag="AC1PJC_001026"
     CDS             complement(7694..7828)
                     /locus_tag="AC1PJC_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001262782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620022.1"
                     /translation="MVNEPYIEPDDDVADTLIAISVISKLLARKIMEEENNEQNERTE
                     "
     gene            8106..10388
                     /locus_tag="AC1PJC_001027"
     CDS             8106..10388
                     /locus_tag="AC1PJC_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017768029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed RNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage/plasmid primase, P4 family"
                     /protein_id="HIP6620023.1"
                     /translation="MKFTLSHSGQTGIQTTTVYPNMVTITDKAILQNVAQFDHVAGLF
                     FNNTRSNANFIKSDVLIMDIDNDHSENPDEWMTVERLKEIFADYNFALVTSRNHMNAK
                     AGKAPRPKYHIYFQINEVTDKDVYVAMKEELCNQYKFFDDNAKDAARFFFGNPNAQVI
                     WHDSWLTIDEDLFQVVSIEDEEDFDADFYTPPSGPIQQGSRNSTMSVFAAKIVKRLGV
                     TQEARDGFDEQAQKCVPPLDIAELDSIWGSAVRFYNRTIKQSQDYVSPEAYNREAMRP
                     DDYTDIGEAGLLAREYGDRIAFTRETDYLAFNGKHWVEDEQLAMRQVHVFLDEQLAVA
                     DANLEDKTKRLIQTGISEELIFKGVKAIEKALDGPSQLSAFKEYKKAFDFHKFVMKYR
                     DYRHLSAIVKTAKHMVRMSVSEFDNNEMLLNTPKATINLSQGLAGVKDHDSTDYITKM
                     ATASPSDKGKGLWLETLATFFCGNQELIDYVQMVVGMAAIGKVYQEHLIIAYGSGANG
                     KSTFWNTIARVLGNYSGKLSADALTMSVRRNVSPEMAELKGKRLIIASEMSEGMRLNT
                     SMVKQLCSTDEILAEKKYKAPFHFVPSHTLVLYTNHLPKVGANDDGIWRRLIVIPFNA
                     KITGRSDIKNFADYLYEEASEAIMSWIIEGAEKAINANFKLTLPKVVAQSVSAYREAN
                     DWMGQFLGDCCEIGDQLTEKSGELYSAYRAYCAGINEYTRSTTDFYTALANAGFTKKR
                     TNKGVIVKGLQLKLDDDFLD"
     gene            10735..11016
                     /locus_tag="AC1PJC_001028"
     CDS             10735..11016
                     /locus_tag="AC1PJC_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001208489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VRR-NUC domain-containing protein"
                     /protein_id="HIP6620024.1"
                     /translation="MREKIVEQKLVSEVKKRGGICPKWVSPSFSGVPDRLVFLPKGKF
                     GLVEVKSPDQKPRKLQVSRHKLFERLGFKVYVLDHIEMIGDVLDEIDIT"
     gene            10997..12373
                     /locus_tag="AC1PJC_001029"
     CDS             10997..12373
                     /locus_tag="AC1PJC_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006268649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140658 - ATP-dependent chromatin
                     remodeler activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SNF2-related protein"
                     /protein_id="HIP6620025.1"
                     /translation="MKLTLHNYQVVAKDFIISHPNAAVILDMGMGKTATTLSAVNELM
                     FDRFEVTKVLVIAPLRVANTVWSDEIEQWAELRHLRYSKIVGTSKQRKVALQKDADIY
                     IVNRENLPWLVEQCSPYFKWDMVVIDELSSFKSWQSKRFKAFMAMRPYMKRIVGLTGT
                     PSSNGLMDLFAEFKVIDGGERLGRFIGEFRSRYFEEGRRNGNIVYEYIPMDYAECQIQ
                     DKISDITISMKALDYLDMPDLISTKKLVRMSEKEKEKYSQFKKEYVLSELDGLEVTAA
                     NAASLTNKLVQLSNGAVYSDDHTVVPLHEQKLDALEDILESANGETVLVAYWFKHDLA
                     RVMGRLEKLKVKSRVLKTEEDIREWNKGNVPVGLLHPAGAGHGLNLQKGGHHLVWFGL
                     TWSLELYQQTNARLWRQGQEAETVVIQHIVTEGTIDEEILKALENKDAQQERLIAAVK
                     AQVGGADG"
     gene            12366..12869
                     /locus_tag="AC1PJC_001030"
     CDS             12366..12869
                     /locus_tag="AC1PJC_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000361943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620026.1"
                     /translation="MDKVDYIAKNYQDMKMKLQLVQEKLLNYRPISEDSVIQSLVFEK
                     SEQEMVKKSKNHGRSELISLNFREKQEQENQEYLSSLLNTYYCLKMDLYYFEFVMELL
                     PEDLKPLANDLIYLGKSWTELEEIYEISHSTLAYRRRKILKQLRKCYRWTSKSLELKV
                     EDYHIPI"
     gene            13068..13250
                     /locus_tag="AC1PJC_001031"
     CDS             13068..13250
                     /locus_tag="AC1PJC_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017646674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6900 domain-containing protein"
                     /protein_id="HIP6620027.1"
                     /translation="MTKRQEEKLSALLTEIAKEELLVETLEKRWSDNLDFYDVSVWGI
                     KRALERAYEAGRQSVK"
     gene            13295..14332
                     /gene="metK"
                     /locus_tag="AC1PJC_001032"
     CDS             13295..14332
                     /gene="metK"
                     /locus_tag="AC1PJC_001032"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003058380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HIP6620028.1"
                     /translation="MIITSEQVSVGHPDKICDQISDAIVTECLKYDKSSRVAVETLIK
                     DNHVVVAGEISTKHYFNLENIVRQVVEPLGLKNVRVTNLLGLQSSDIAQGVDNGGAGD
                     QGMMFGYATDETPEYLPLPYVLATRVLEKLMSLGHPLLGKDAKAQVSYDYEKNRIDTF
                     LVSIQHTETADLAKVKRIVTEAMMAVALRYRQNLDFNVLVNPTGRFVLGGSFADAGVT
                     GRKIVADTYGGFAHHGGGAFSGKDPSKVDRSAAYMARKIAKDIVREGYAKRCEVQLAY
                     AIGVAEPVSVYVETFGTSRYTSTQLEGMIRERYDLTPQGIIKELHLLNVDYTKTSCFG
                     HFTKAYLPWEK"
     gene            14334..14699
                     /locus_tag="AC1PJC_001033"
     CDS             14334..14699
                     /locus_tag="AC1PJC_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HIP6620029.1"
                     /translation="MPRRPSTPCKQNGCPNLVPYGHKYCDNHKANYQLDTKSTKAKGY
                     NAQWNKARLRYLKVQPLCVQCKVKGRLTKATVVDHITPHRGDQDLFWNQTNWQALCKS
                     CHDRKTKTTDRYVEYTYRF"
     gene            14998..15459
                     /locus_tag="AC1PJC_001034"
     CDS             14998..15459
                     /locus_tag="AC1PJC_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIP6620030.1"
                     /translation="MDESQRKQIWKMRAEGLGYGLIGKATGLSRDSVKKYCKRNPALL
                     GHGAATKQMAKADQNDGLRCPQCYQTLKIHKIGRPKKFCSDKCRKVWWTTHSDEHDKS
                     KTAYEDLTCQQCGRSFLSYANPNRKFCSHSCYIQSRFYKGETNDKSTNNGN"
     gene            15431..16309
                     /locus_tag="AC1PJC_001035"
                     /pseudo
     CDS             15431..16309
                     /locus_tag="AC1PJC_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006740451.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
     gene            17000..17134
                     /locus_tag="AC1PJC_001036"
                     /pseudo
     CDS             17000..17134
                     /locus_tag="AC1PJC_001036"
                     /inference="COORDINATES: protein motif:HMM:TIGR01443.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            17162..17539
                     /locus_tag="AC1PJC_001037"
                     /pseudo
     CDS             17162..17539
                     /locus_tag="AC1PJC_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006739362.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-methyltransferase"
     gene            17635..17883
                     /locus_tag="AC1PJC_001038"
     CDS             17635..17883
                     /locus_tag="AC1PJC_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015057739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620031.1"
                     /translation="MTTTLEKLYEIYPTTASIIPYKEWVIVASKGNKETVVEIYETVD
                     SLEEFELFECRLNRIYKESIIVTDLGHAVKWAFDKIGE"
     gene            17885..18097
                     /locus_tag="AC1PJC_001039"
     CDS             17885..18097
                     /locus_tag="AC1PJC_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003058370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4314 domain-containing protein"
                     /protein_id="HIP6620032.1"
                     /translation="MDAKIFNYLKTIYPVGTKVRLVKMDDPHPVPKGTLGTVIGVDDI
                     GSLLVKWENGSCLNVLYGIDIVEKVK"
     gene            18111..18329
                     /locus_tag="AC1PJC_001040"
     CDS             18111..18329
                     /locus_tag="AC1PJC_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620033.1"
                     /translation="MTRTVGDRHYVCEFLREDTTDPRNIDGAWIRILTIKRDGEYIYK
                     YRYGNEIDNMDDIDRTVCQAVLDNFNEL"
     gene            18380..18853
                     /locus_tag="AC1PJC_001041"
     CDS             18380..18853
                     /locus_tag="AC1PJC_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000290865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase small subunit P27 family"
                     /protein_id="HIP6620034.1"
                     /translation="MAIRGRKPKPTNMKILEGNPGKRPLPTNEVKPNQKAPRCPQWLE
                     DDAKKEWKRMGKILEQMGILTEMDMTAFAGYCQAYARWKEAEEFLSKHGSIIKTPNGY
                     LQQVPQVSISQTNLKIMLKFCEQFGLTPSARNRLATMDSEVGIGDEMEDLLGGIL"
     gene            18850..20442
                     /locus_tag="AC1PJC_001042"
     CDS             18850..20442
                     /locus_tag="AC1PJC_001042"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006268711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140657 - ATP-dependent activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HIP6620035.1"
                     /translation="MSYHYEPSPFMLPTSHYDEAKADRAVTFINNLSHTKGKWAGKRF
                     DLLPWQEQIVRDLFGIVKEDGNRQFLTAYIEIPKKNGKSELAAAIALYLLYADNEASA
                     EVYGAACDRNQASIVFDVAKQMVQMSRPLEKRSKIMGATKRIVNYSNAGFYQVLSAET
                     GTKHGLNVSGLVFDEIHAQPNRHLYDVLTKGSGDAREQPLFFIITTAGTDRNSICYEL
                     HTKALDILNDRKKDTSFYPVVYGLSDEDDWNDEANWLKANPSLGHTIGIDRVREAYQQ
                     ALDNPAEENVFKQLRLNMWTSSSVAWIPEHVYAKGNDPIQYESLKGRSCYAGLDLSST
                     SDITAFVLVFPPRFEEENYIVLPYFWLPEDTLELRCRRDHVLYDVWERQGYIKTTEGN
                     VVHYGFIEKFIEDLSEIYHIKEIAYDRWNATQMVQNLEGMGLTMVPFGQGYKDMSPPS
                     KELYKLMMEGKIQHGGHPVLKWMGQNVVMRQDPAGNIKPDKEKSVEKIDGIVALIMGL
                     DRCIRHQSDEGSVYDERGILSF"
     gene            20508..20801
                     /locus_tag="AC1PJC_001043"
     CDS             20508..20801
                     /locus_tag="AC1PJC_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000024184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin"
                     /protein_id="HIP6620036.1"
                     /translation="MASTQPVNFRADSTFYKQTKEILADEKLTLSDIFNAALRKIATG
                     AVDPKEFVNSDLQETQYQVAFEDLKKEILIGHQEIEQGKLTSLADVRKEFGLE"
     gene            20794..21132
                     /locus_tag="AC1PJC_001044"
     CDS             20794..21132
                     /locus_tag="AC1PJC_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000181405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA];
                     GO_function: GO:0090729 - toxin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HIP6620037.1"
                     /translation="MNNHKRYHVSLTDQAKRDLGGIHDYILHNFYSQQSADSKLDLIL
                     TALETLETFPEACPLVSSRGYGELTDDGKRYRYMPIENYLAFYYIDNHEVYVARILNS
                     KQNWAKLFNK"
     gene            21456..22739
                     /locus_tag="AC1PJC_001045"
     CDS             21456..22739
                     /locus_tag="AC1PJC_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003054967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HIP6620038.1"
                     /translation="MGLLDLLGRKRARDKPRNSYEGQDFSYLFGRTTSGENVDEFKAM
                     QTTAVYACVRILAEAVASLPIHVYERTATGKEKKVEHPLYFLLHDEPNPEMSSFVFRE
                     TLMTHLLIWGNAYVQIIRDRSGQVISLYPLLPDKMSVHRDESGKLYYKYKRQSEENPN
                     FKEKGDAILRAEDVLHVPGLGFDGLIGYSPIALAKNAIGMTLATENYGASFFKNGANP
                     GGVLEHPGILKDPKRVRDSWNAVYNGVTNAHKVAVLEEGMKYTQIGIPPEEAQFLQTR
                     KFQINEIARLYRIPPHMVGDLEKSSFSNIEQQSLEFVKYTLDPWVVRLEQAFKRSLFL
                     PEEKKSYFVKFNVDGLLRGDYQSRMNGYAIGRQNGWLSTNDIRELEDLNLLSDEEGGN
                     LYLINGNMTKLKDAGGFMKQAPLEQETQSEEELDA"
     gene            22732..>23249
                     /locus_tag="AC1PJC_001046"
     CDS             22732..>23249
                     /locus_tag="AC1PJC_001046"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003084543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0046797 - viral procapsid maturation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="head maturation protease, ClpP-related"
                     /protein_id="HIP6620039.1"
                     /translation="MHKFWNFTEDDSGRTLRIEGQIADETWFGDEVTPQVFKNDLHAG
                     SGDLTLWINSPGGDVFAAAQIYNMLMDYKGDVHVVIDGLAASAASVIAMAGTTVSMSP
                     VAMMMIHNPWTVAQGEAKDMQKVIEMLGEIKESIINAYELRTGLSRTKLSHLMDSESW
                     FNAKKAVELGFA"
BASE COUNT         7085 a         4283 c         5223 g         6658 t
ORIGIN      
        1 cggattaagg ctacctctcc atcttggtag acaggttcca tggaataccc atcaatccat
       61 gtagctacat cgtataagta ttctctatct gtgaatacct ccttggtttc acattcatcc
      121 caaaaatcat taccatgtcc agctgataga gccacattgt caaggacatg aactgaaaat
      181 agtggaataa tcttttgttc caaaagaagg tcatgagtta actcttcgac cttcttttta
      241 tttgtcttgt tgagctgttt atagagagtc agatgggggt gttcttcttg aagctcactt
      301 gcctcaatat gaagaagttg agctagttct cctaggtgct ttttatttgg cactgttttc
      361 cctgtctccc aagctgaaag agttgctctg gtaacaccta attcatttgc tatagctgtc
      421 tgagatagtt tcttggctaa tcggtgttct tttaatttac tagctgaaaa cattttctct
      481 tccttttgtc attttataga ttgacaaaat tataccatag tgtataatat aaagcaagag
      541 gaaagagtag gtatatctgt aattcaaatc tcgatagtaa tagcactagg ttttaggaga
      601 aaaagatatg gcatttaatt catttgaaaa attgcttcaa tcaaactact acaacgatat
      661 ttttaaagca gtagataatt atatttacca ccaacgctca gagatatcgg tcaagtcaca
      721 taccgttgaa gacccaaact ttaagaagtt ggatgatttt acgataaaga aagtcttgtc
      781 tcgtaaagtt agagacggaa tgattgtttc tgaacttcag gtcattgctt ctcttgaaat
      841 taaggggcag acgaagtatg gctatgaaac agatagtgcc aatctatggt taagagtgac
      901 agttgagtat gaattgaatg agggcataca tgactttaaa attctaaaag ttatcccatt
      961 tgatccaaca gattatgaca agagagaact aggtcttagt ccagaatttg tcccttacat
     1021 taaagctgct gagtttgacg agattgcaga aggcattttg aagcagtatt accctcaagc
     1081 tctcgaagtt cccttggctt tgccgattga tgattatcta gctaatattg gcttgaataa
     1141 gatggagggg aaactaacag aggacagctc tatttttgga gagatggtct tcaaagatac
     1201 agaagtcatg ttttatgatg gagatacccc tgagtctcga ctagtcaaga aaaagaccat
     1261 tctggttgat ccagaggtta tctgcttacg taatcaaggg agctacaata atacagttgt
     1321 tcacgagtct gtccactggc tacttcatca ctattataat gagtataaga tgctttttga
     1381 taagggacat aagagaagca gtagtttaaa agatagttcc tctttatctc tatcgtcaga
     1441 ctggagtgac tatgattgga tggagtggca ggccaatggt attgcggcta gaattctgat
     1501 gcctaagtct acaaccaagc agaaagttaa ccagcttttt acagattact ccttgaagta
     1561 taccagtgat gagaagttga ctatgttcga aagaatcatc gatgaactag ctgagttctt
     1621 ccaagtttct cgtttggccg caaaaattag actacaacaa ctcggttatc atgagtttga
     1681 aggtatttac aattttgttg gggatgagta tctgcgcagc tatggttgtg aacttcgagc
     1741 catgactgaa aataagagtt ttacgatatc ctttcctaat gcctgccttc tgagttggaa
     1801 gaatgaatca tttagagagt tgatggattc tggtcaatac gtttatgtgg ataatcattt
     1861 ctgtcttaat gattctcgct atgtgactat ggtggagtat ggtgtctatg aaatgacgga
     1921 ttatgcctac caacatatgg atgagtgctg cctattattt gatatttcct ataagaagga
     1981 taaaaccaaa tctatatcta ttacaatatt taatgagtac gtcatgtacc gtggaaaagc
     2041 gacagttgaa atagaggtag atttctctga gtttattaat attgtcaatg gtgcggttat
     2101 tccagacggt ggaagaatat ttgaagaggt cgctcgaatt aatgaggaga tgccgagtgg
     2161 cttttgtggg atgttggtct accaccgtga gcgtaaaggg atcacccaag aacaactcgt
     2221 tgaggcatcc ggtgtcagtc tcacaaccct ccagcgtttt gaaaccaaaa gggatgccag
     2281 tcggaagttg gagaagatga tggggattac tcttggaatg aagttatacc ctgactttag
     2341 ttttaaactg attgaaaaga gtggcactac ttttagagat gatatgccaa ctcattgtgc
     2401 ttataagatg ttgctttggc attgttacca cctgggggct tatgaatgca atcagaagtt
     2461 gatagagatg aaaattcctg aattttttgg gaaataatta aaaaagtacc cgtcattttt
     2521 tggtgggtgc tttttgcttg tcgttgatga attattgagt gatgtttgga gaaggagtcg
     2581 tataggcttg ccttaaatta ctgaatcaat aatgttttct aaatgaggga tactggtgta
     2641 cccctcattt tttgctgtgt tacttttcgt tcaatggtac tatactagac ttatcaagat
     2701 cacctaccgt caatacggag tcatgacgat gaccataatt tcagatgtgg agacggtagg
     2761 aaactttttc agcttgtgaa attggctgac cgatacatag agggaaacag ctatgcggtc
     2821 aatccttttt agagtgctcg ttgccttgtc atggctgctt tcggtattaa gagaaagtca
     2881 gtcaaatcat gacaatcaaa gacaaaacct gtcaaaacga gtataagaag cacgactttt
     2941 ctagtgagaa gtcatataac gacatccctt gtcaagaggg agaaatcctt gctcctatgg
     3001 tggttagaga caaagcaatg gtcaagtctt tccagatgaa ttctgagaat ttcaaaactt
     3061 ggcgctttat gggtcaccct gtacgggttg cctttatccc tgtggctcaa gaccagtttg
     3121 agactacgat gagaatcttc aatcaggatg taaaggaatg cctgagtcgt catactaagt
     3181 ctaagctaga gactatatcg cttgagaaat gtttcgagga tatggatgct gaaggcggaa
     3241 gtggggtaga cccaactcgc acggagtcag aggttgagac cctgatgctc tttgagacct
     3301 tagaagagtt gattgaagaa gtctaccgaa aagaccagcg taaggggcta atcctaaaag
     3361 ccatctatga agacatggat atctccaagc aagatattat taaacgactt ggccttgcta
     3421 agacgagggg ctatgagctg attaaagaag cccatgaact agccagagaa acttatctgg
     3481 aattgaatcg ctaattaaga aatcccacta gacacgtgat atctagtggg atttttcgtt
     3541 agtctttctg gtagaagaag cactcatagc catctgctcg taggttgata tctggcatcc
     3601 aaggtggggc aatagccatt tgtttgctga tggaggtgac tgtttggtca aggtcagctt
     3661 caatgatgac ctcgtcatgg acatgggcga caatggcttc atcctttaac tgtttcatgg
     3721 catagactag tatatcacgg ctgatggcct ggacaatatt ttccacaaac tttggtccgt
     3781 agctatcaat ccttgcccat tttttcccag tcacaagccc ttcgtaagtc acagactctc
     3841 ccccgaattg gtttgttccc attcgaggtt taatataggc aagttgtcga cttgaaggga
     3901 gggtgatgaa taggattccg cttttgactt cgaaggatag accatgggtt tgtgttttga
     3961 tgtgctcctt gactgcagtt ttgactgccc tatccacgtc ccaccagaac agaatgatgt
     4021 tgggattggc ttgtcgccaa gagtcaacca gaggttgaag ttcatgttct tgaagtccca
     4081 tatccaacgc ccccatggca gtcaatgcac caacggatcc accgtatcca caggccaact
     4141 ccgcaacctt ccctttctgg cggaggtctg agttaatgcc gtgtttctct acggggactc
     4201 caaacatctg agaagccgac atacaataga tgtcatctcc tttttcaaag accttgtttc
     4261 gccaacgttc accagctaga tgtgagagga cacgcgcctc aatggcagag aagtcgcaga
     4321 caatgaattt cttacccttt gttggcacaa aggctgttct gattaattga gagagggtat
     4381 cttgcacatc ataaagtaga gcaacggagt cataatcacc tgccttaacc aaagcacgag
     4441 cctctgacaa atcaggtaag tggttctgag ggaggttttg aagctgaatc agccgacccg
     4501 caaatcgacc agtacgattg gctccgtaga attgaaacat ccctcttgca cgtttgtctc
     4561 tacagatgac cctagtcata gcctggtatt tggagacgct ggacttggtg gcttgcttac
     4621 gaagcattaa tacctgagcc gtttgagcat caacggtttt tagtagttca ttcacagcct
     4681 tcttatcgag agaatcagtt gagacaccgt gttcccgtaa ccaagtaatc atctgaagaa
     4741 cggagttggg gttttctagg cctgttaggg cagtgagttc ttcttggata tgggatttgc
     4801 tgatggagtc aatgtggatg gctgctgaga caaagtcttc gtcaaggctg attcctctgt
     4861 cattaatcat ctggtcgtgc tggtattctg cccaaataaa attaggtaca gggaagtttt
     4921 tgagcttgtc ttggatggcg atttccactt ccacatcact cttgttgtag gtgatgaagg
     4981 cttgccactt gtcaggtgcg tgttgaggca aattgcgagt tcgtccgcca tttaccttag
     5041 ttggagtaca gggaatgcag aagtagcgga tgagttcctt gccctcgttt agtttttgct
     5101 ggtccagttt taagacagca cccacacctt caagagaaag aggcaatcca agataggctg
     5161 accaaatcaa ggtacaccgc cacgagttag gagataaaaa gtcctgagtt agcttatctg
     5221 gatagcgttt cttaatccag ttagacaggc agacacgctc aaaggtcgca tgaaaggccc
     5281 acttgagaat agtgtcatct aggatggctt ctaaaacggt gttaggtaag tcttccttcg
     5341 ttaggtcata gaccacaaca gggttgtgat taatggagac ggcaagaagt aggatgtcaa
     5401 agctatcatc ttccgcatag cgatagacac cagattttcg taagtcaatg tcgcaatagg
     5461 tttcaatgtc gatgctgagt tctttaatcg gcatagtttg tcctttctga aaaaggtgac
     5521 agaagtactg ccacctaaag ttctatttgt tttttcgact gagtggtgtt tggctaagtt
     5581 tttctttatt ttgcttcgcc tttcgttcca tttcatttcg aatgtcattt ctaatggtca
     5641 tatatccaaa gtatagtgct attaacaccc aaattcccat taaagtacaa gttaaaatag
     5701 tatacatcat caatctaatt ctccatttct agttcaaaaa gtcatcatcg tcttcagtcg
     5761 caaaatcatc ctcagcacga gtgcgtcctc cgaggggttc accatcacgc aatttttgca
     5821 agttattcaa accgcaagca atacctttgt tgccattgga attaaatgcg tagaaggtga
     5881 ttgaagcacg tccgtagatg ccagagtaca attctgaagt atcaatgatt tcttgacgat
     5941 tgccatcaac gactccaggt ttgtgtggcg agttggcatt tacgaagtag gcatttttgt
     6001 atgcttcatc atcagggcgt tcaaggtcac catctcgaag gggagttttc agagtagata
     6061 atgcaggtac tgatttgcca ttgcctttga gttttgactc accttcttta taggcttgct
     6121 caatagcagc tttgattttg ttaatggtta cggtatcctc ttttgggatg atgagtgagg
     6181 cactgtactt gggagtgcta ccatttatag attttggctc gttggcattt aagtagctga
     6241 agcgagtgtt tggtcctgtt attactttag ttgtcatata gttattcctc tttaaattca
     6301 ttttttgcta ggttcatctc ttgacggcta tcgtcaatag gaacgagtgt tggtttaccg
     6361 cttggtttta caaccagacc accaagcagg tcgttaaagg ttttcttgcc aaggagttta
     6421 gtcatggcag tgatagtgag cagtttcttc tcataagggt caaagcctgc ttcgatcact
     6481 gcttggctaa cggctgactc atctgagaat ttacgaacag agcgaccttc aaccagtttg
     6541 tatcctggga taggatgtcc atctgttgct tgatttaaag cataagcttt gatgtcgttt
     6601 gcccatgaaa ttaacaaatc tagtttaggc aaaatctctg cgatgtcctc gttatcaagg
     6661 gaagctggat ccgcaaactc catcttggct agtgccaaat tatcctcagc acgtttgcga
     6721 cagacattct tgagcttaca gaattggcag tatttaccag attgcatctc cccctcacct
     6781 ttgaatgcaa gttcagcttt tggagcgagt acgttttcag cccattcaag caactcagct
     6841 ttttccatct caaaggtaga aatgttatgt tttcgtggtt gaaagatggt catggtaacg
     6901 ttatcgaaat tataaagtcc atcaaacatc tcaagtgctc caagtgcata acacatcatt
     6961 tgagggttgt ggtcttcatc aacctgaaca ccaagtccat gtttataatc aataacctga
     7021 agaagtccgt ctgccacgat gatgcaatct ccagttccaa agccttcagg tacccactta
     7081 gaaaaatcca gtcgttgttc tataagaact gtagggtcac gagagtaacc tctagctttc
     7141 tcgacttgtt ccatgacata gttgcgatat tcttctgcac attcctgcat ctcatcgttg
     7201 tagaatgtta aatcttcagt tggatcacgc gcattcctac ccaaggcttt ctcgactaga
     7261 taagcacaca actcgtgagc atccgtacct tcgatagcaa aatcagatgt tgtgtctggc
     7321 agatcttcgg tgagacgagc agacggtggg caattcaacc aacgatgtga tgcagatgcg
     7381 gatagaatgg cgtggttagt cattaccaat tcctccagct tcttcaagta ctgccgcaaa
     7441 gtgttttggg tcaagtactg agagtgaaga agcaccgtaa gcatttagaa gagcacggac
     7501 gtcttcctta tagccatctt ttgctttcgt ggcaagtaca gcacggacat cctccaattg
     7561 aatttccttt tgtggttcat tttttggtgg atttgattta ggtgctgttt catcctcagt
     7621 agtgaggagt ttcttgaact catccaccaa gcgaaggtag tactttgcgg tttcttccat
     7681 atcatgaatc agtctattca gttctttcat tttgctcatt gttttcttcc tccataattt
     7741 ttctagcgag tagttttgag atgacgctga tggcgatgag agtatctgct acatcatcat
     7801 caggttcgat gtatggttcg tttaccatat ttggtcctcc tatcttacta agtaaggttt
     7861 cgaatgattt ttccgttttg taaggaatat ttttatccct tacatcttac taagtagatc
     7921 taagagatgt ttttccgctt ctcactataa ttttttgaac ataaaaaagt ttcctgtgca
     7981 tttaatagga aacttttact tttctaaaaa aaatttcgga agtgcggaaa atcatctctg
     8041 tttcttactt agtaaggtag gaagcaagtt tcctaattta aaaactaaag acggaggcat
     8101 atcaaatgaa atttacccta tctcattctg gacagacagg aatacaaaca actacggtct
     8161 atccaaatat ggtaactatc actgataaag ctatcttaca aaacgtagct caattcgacc
     8221 atgtggcagg gctgtttttt aataatacac gctcaaatgc caatttcatc aagtcggatg
     8281 ttttgatcat ggatattgat aatgaccact ctgagaatcc agatgaatgg atgacggtcg
     8341 agcgattaaa agaaatcttt gcggattata actttgcctt ggtaactagt cgaaatcata
     8401 tgaatgctaa ggcaggaaaa gctccaagac caaaatatca tatttacttc caaatcaatg
     8461 aggtaactga taaagatgtc tacgtagcta tgaaggaaga actttgtaat caatacaagt
     8521 tttttgatga taatgccaag gatgcggcac gtttcttctt tggaaatcca aatgcacagg
     8581 ttatatggca tgattcatgg ctaactattg atgaagattt gtttcaagtt gtttctattg
     8641 aagacgagga agatttcgat gcagacttct atactcctcc aagtggacca atccagcaag
     8701 ggagtcgtaa ttcaactatg tctgtatttg cagctaagat tgtcaaacgg ttaggcgtga
     8761 cccaagaagc tagggatggt tttgatgagc aggcacagaa atgtgtacca ccacttgata
     8821 tagcagagtt agattccatc tggggaagtg cagtccgatt ttacaatcga accattaagc
     8881 agtcacaaga ttatgtatca cctgaggcct ataaccgaga agccatgcga cctgatgact
     8941 ataccgatat tggtgaagca ggactgttag ctcgtgaata tggagaccga attgctttta
     9001 ctcgtgagac tgactatctt gctttcaatg ggaaacactg ggtggaggat gagcaattgg
     9061 ccatgcgaca ggttcatgtt ttcttggatg agcaactagc agtggcagat gccaacctag
     9121 aggataagac aaaacggctc atccaaacag gtatttcaga ggaactgatt tttaaggggg
     9181 ttaaagccat tgaaaaagcc cttgatggac caagtcaatt atcagccttt aaggagtaca
     9241 agaaagcatt tgacttccat aaatttgtca tgaaatatcg tgattatcgc catctctcag
     9301 ctatcgttaa aaccgctaaa cacatggttc ggatgagtgt gtctgagttt gataacaatg
     9361 aaatgttgct caatactcct aaagccacca ttaacttatc ccagggctta gctggtgtaa
     9421 aagatcatga ttcaactgac tatatcacga agatggcaac agcttcgcca agcgataagg
     9481 gaaaaggctt gtggctagag actctagcaa ctttcttttg tggtaatcaa gaactaatcg
     9541 actacgttca gatggtggtg ggtatggctg ctatcggtaa ggtttaccaa gagcacctta
     9601 ttatcgctta cggcagtggg gcaaacggca agtctacctt ttggaatacc attgcacgag
     9661 tgctgggcaa ctactcaggc aaattatcgg cagatgctct aaccatgagt gtccgacgaa
     9721 atgttagccc tgaaatggca gagttaaaag gaaaacgtct tattattgca tctgagatga
     9781 gtgagggaat gcggttgaac acttcaatgg ttaaacaact ttgttcgaca gatgaaatct
     9841 tagctgagaa gaagtacaag gcaccatttc attttgtgcc atcacacacg ctagttcttt
     9901 acaccaacca tctaccaaaa gtaggtgcga acgatgatgg gatttggaga cgtctgattg
     9961 tcattccttt taatgccaaa atcacaggtc ggtcagatat caaaaacttt gcggactacc
    10021 tgtacgagga agcatccgag gcaattatgt catggattat tgaaggtgca gagaaagcaa
    10081 tcaatgccaa tttcaagtta actctgccaa aggttgttgc tcaatctgtg tctgcctatc
    10141 gagaagctaa tgattggatg ggtcagtttc ttggtgattg ttgtgaaatc ggcgaccaat
    10201 taactgagaa atcaggagaa ctttactcag cttatcgagc ttattgtgct ggtatcaatg
    10261 agtacacgcg cagcacaacg gatttttaca cagctcttgc gaatgctggt ttcaccaaaa
    10321 aaagaacaaa caaaggtgtt atagtgaaag gtttacagtt gaaattagat gatgatttcc
    10381 ttgattaaca gtgtaaatca gtgcaagttg cctctagcaa taggaggtgt tagtgcatgt
    10441 cgtgatagtt aagtcacaga gtgattatca gagtagctga aagttgatgt ttttagtgaa
    10501 gagaaaagtt tatacaaaac tgtcacgact ttcactggag ttaaaaagtg catgtcgaga
    10561 atgtcacata caaaagttgc cataggaaga tttaaagtgc aggtttagta ggtcttttct
    10621 ataacttaga tataagaaaa aataaaaaag ataaaagaga tataggaaag taatgtaact
    10681 gactatcgtg agatacactt tttccttggc gatgttttga cgagaggatt tattatgcga
    10741 gaaaaaattg tagaacagaa gttagtgagt gaagtgaaaa agcgtggagg gatttgtcct
    10801 aaatgggtat ctccatcttt ttctggtgta ccagacaggc tagtgttttt acccaagggc
    10861 aagtttggct tggtggaagt gaagtctcct gaccaaaagc caaggaagtt acaagtgtca
    10921 aggcataaac tgtttgagcg gttaggtttt aaggtttatg ttcttgacca cattgagatg
    10981 attggagatg tgctagatga aattgacatt acataactat caagtagtcg ccaaggactt
    11041 catcataagt caccccaatg cagcagtcat tttagacatg gggatgggga agacggcaac
    11101 aaccttgtct gcagtaaatg agctgatgtt tgaccgattt gaggtcacta aggttttggt
    11161 tattgcccca cttcgagtcg caaatacggt ctggagtgac gagattgagc agtgggcgga
    11221 gttgcgtcac ttacggtatt cgaaaatcgt ggggacatcc aagcaacgaa aagtagctct
    11281 tcagaaagat gcggacatct atatcgtcaa tcgtgaaaac ctcccttggt tggtggaaca
    11341 atgtagtccc tattttaagt gggatatggt agtgattgat gaattgagtt ctttcaagtc
    11401 ttggcagtcc aaacgcttca aagctttcat ggcaatgcgt ccttacatga aacgtatcgt
    11461 tggtttgact ggaacaccta gttcaaacgg actaatggac ttgttcgctg agtttaaagt
    11521 cattgacgga ggagaacgtc ttggtcgatt cattggtgag tttcgtagtc gctactttga
    11581 agaaggtcgt cgcaatggaa acattgttta tgaatacatc cctatggatt atgcggagtg
    11641 tcaaattcag gacaagatta gtgatattac catttccatg aaggctctag attatctaga
    11701 tatgcctgat ttgatttcaa ccaagaagct ggtgcgtatg tcagaaaagg aaaaagaaaa
    11761 gtacagtcag tttaagaaag agtatgtttt atcagagttg gatggattag aagtaactgc
    11821 tgccaatgca gcaagtctta cgaacaagct agttcagttg tccaatggtg ctgtatattc
    11881 tgatgatcat acagtcgtgc cgcttcatga acagaaacta gatgccctag aagatatcct
    11941 tgaatccgca aatggagaaa ctgtcttagt ggcctattgg ttcaaacatg acttggctcg
    12001 ggttatgggc cgtttggaaa aactcaaggt aaagagtcgg gtgttgaaaa cagaagaaga
    12061 tattcgtgaa tggaataagg gtaatgttcc agttggctta cttcatccag ctggagcagg
    12121 tcatgggttg aatcttcaaa aaggcggtca ccacttggtc tggtttggtt taacgtggtc
    12181 attggaacta taccaacaaa cgaatgcacg gctttggcgt caaggccagg aggctgagac
    12241 agttgttatc caacacattg tgactgaagg aacgattgat gaggaaatcc tcaaggcact
    12301 agaaaacaaa gatgcacaac aagaacggct gattgcagct gtaaaagcac aagtaggagg
    12361 ggcagatgga taaggtggat tatattgcta agaactatca agacatgaaa atgaagttac
    12421 agttagttca agagaaattg ctcaactatc gaccaatctc agaggatagt gtgattcagt
    12481 cattagtatt tgagaagtca gagcaagaaa tggtcaagaa aagtaaaaac catggtcgta
    12541 gtgagctgat ttcccttaat tttagagaaa aacaagaaca agagaatcaa gagtacctca
    12601 gtagtttgct taatacctat tactgcttaa aaatggatct ttattacttt gagtttgtta
    12661 tggagttatt gcctgaggat ttgaaaccat tagctaatga tttaatttac ttaggcaaga
    12721 gttggactga actagaagag atttatgaaa tcagccattc aacacttgct tatcgtaggc
    12781 gtaagattct aaaacaatta cgcaagtgtt atcgttggac atcaaaaagt cttgaactta
    12841 aggtggaaga ttatcacatt cctatctagt gatggtcgat tgcactaaat tggtactaaa
    12901 ttagcactac attagcacta aatttgtact gttttagtac tgattttcaa cctagacctg
    12961 tgatatactt aagatgtcaa aaaagataaa aaatacccag taatgactgg atatatctcc
    13021 tttttagagt taatatgtac acaacaaaag aagaggagaa caatacaatg acaaaacgcc
    13081 aagaagaaaa actcagtgca cttttaacag agattgctaa agaagaacta ctagttgaaa
    13141 ccttggaaaa acgttggagt gacaacctcg atttctacga tgtttcggtt tggggaatca
    13201 aaagagcatt ggagagagcc tacgaagcag gccgacaatc agtaaaataa accaaagcct
    13261 agcccgaggg ttgggctttt tgcgtggagg aattatgatt attactagtg aacaagtgtc
    13321 ggttggacac ccagataaaa tctgtgacca gatttcagat gctattgtga cggagtgtct
    13381 caagtatgac aaatcaagtc gagtggcagt tgagacttta ataaaggata accatgttgt
    13441 ggtagctggt gaaatttcta ctaaacatta ctttaatctc gagaacattg ttcgacaggt
    13501 tgtcgagcca ctaggtttga agaatgttcg ggtaactaac ctacttggac ttcagagttc
    13561 cgatattgcc caaggtgtag acaatggtgg agctggtgac caaggaatga tgttcggtta
    13621 tgcgacagat gaaacacctg agtacctgcc acttccttat gtcttagcaa ctcgagtcct
    13681 tgagaaactg atgtcactcg gtcacccctt acttggaaag gatgcaaaag cacaggtatc
    13741 ctacgactat gagaagaatc gaattgatac atttttagtt tccatccaac ataccgaaac
    13801 ggctgacctt gccaaagtga aacgaattgt gactgaagct atgatggctg tagctcttcg
    13861 ttaccgtcag aatctagatt tcaacgttct agtcaatcca actggtcgat ttgttcttgg
    13921 tggctcattt gcggatgcag gagtgactgg acgtaagatt gtggcggata cctatggtgg
    13981 ttttgcacat catggtggag gtgctttctc tggaaaagac ccaagcaagg ttgaccgctc
    14041 agcagcatac atggcacgaa agattgctaa ggatattgtt cgagaagggt atgcgaaacg
    14101 atgtgaagta caattagcct atgccattgg agttgcagaa cctgtgtcgg tatatgtaga
    14161 aacctttgga actagtcgct acacctcaac acaactggaa ggaatgattc gtgaacgcta
    14221 cgacttgacc ccacaaggta tcattaagga acttcatctc ttgaatgtag actacaccaa
    14281 aacatcttgc tttgggcatt tcacaaaagc ctatcttcct tgggagaagt aagatgccaa
    14341 gaagaccaag cacaccttgt aaacaaaatg gttgtcctaa cctagtacct tatggtcaca
    14401 agtattgtga caaccataaa gcaaactacc aactggatac caagtcaacc aaagccaaag
    14461 gatacaatgc ccagtggaat aaagcacgac ttcgttactt aaaagttcaa ccactttgtg
    14521 ttcaatgcaa agtcaaaggt cgattgacca aggcaacagt ggttgaccat atcacacccc
    14581 accgaggtga ccaagacctc ttttggaatc aaaccaactg gcaagcactt tgtaagtctt
    14641 gtcatgatag gaagaccaag acgactgacc gatatgtgga gtatacgtat cgattttagt
    14701 cttggagttt cgttacaaaa gtatctaatt tttaaccctt tgggggaggg gggatgaaat
    14761 ctctaaaccc ttgggagact aagaccgacg ccccctcaaa cgtgcaattt cgcaaaattc
    14821 gcaagcgggt acattaaaat cgctcaatta ttacgttcgt tcccaccgtt atcacgtttc
    14881 taatgtgggg atgtagcgtt ccctagtatg tcattttggt aataaaatag tgaaaaaggc
    14941 tagaaacaat gtagaaaata gttgttttta gtcctttttt gctggaaagg aaaacaaatg
    15001 gacgaaagtc aacgcaaaca aatctggaaa atgcgagcag aaggtcttgg ctatggctta
    15061 atcggtaagg ctacaggact gtctagagat tctgttaaaa aatactgtaa acgaaatcca
    15121 gcattgcttg gtcatggagc ggcgacaaag caaatggcaa aagccgacca gaatgacgga
    15181 ctccgttgcc ctcagtgtta tcaaacactt aaaattcata aaataggaag accaaagaag
    15241 ttctgttcgg ataagtgtcg taaggtttgg tggacaacac attctgacga acacgacaaa
    15301 tcaaaaaccg catatgaaga tttgacttgc caacaatgtg gcaggtcatt tttatcttat
    15361 gccaatccaa ataggaaatt ttgtagccac tcgtgttaca ttcaatcacg cttttataaa
    15421 ggagaaacca atgacaagtc aaccaacaat ggaaattaga gaaattcgat tatctgaact
    15481 acacccagcc tcctacaatc ctcgaaaaaa actcaaaaag ggtgacaagg agtatgaaaa
    15541 gattaagcaa agcctcatca agtttggtta cgttgacccc atcatcgtca ataaagactt
    15601 gacggtaatt ggtggtcatc aacgattaac tgtattgaag gacttagact atgaaaccgc
    15661 caaatgtgtc attgtcaatt tatccaagga agatgaaaag gcactaaaca ttgcccttaa
    15721 caaaatcacc ggtcaatggg atgaccagct tttggcggat ttacttttgg atttacagga
    15781 gtcggatttc aatctcgacc tgactggttt tgaaccacca gaaattgacg atatcctatc
    15841 aaatgtccat gataaagacc tatcagatga tgactttgat gttgaagagg aattgaagaa
    15901 acccaccttt tcaaaacaag gggacatttg gcaacttggt aagcatcgag tgatttgtgg
    15961 cgattcaact aaagctgaaa cgtatgacca actgttaggt gataaaaagg caaatttggt
    16021 tgtgacagac cctccttata acgttgatgt agaagaatca gctggaaaga ttctcaatga
    16081 caacatgcca ggtagtgaat tttaccagtt tctttttgac atgttcactc aggtagaaaa
    16141 acatatagaa tctgatgcct ccatctatgt attccatgcg gatacagaag gactgaactt
    16201 ccgaaaggca tttaaagagg cgggattcta cctcagtggg tgttgcattt ggaagaagaa
    16261 ctccttagtt cttggacgta gtccctatca gtggcaacat gaaccatgtc agccagcagg
    16321 tacgattgtt caaactataa atggtcccgt tccaatagaa gacttaaagg atggtgatag
    16381 ggtcattagt tacaattcct attcaggaac aattctgggg atgcgtaatg gtggctatga
    16441 gataaaaaca gcttctcgat attataatgg caccttatac ggtataaaaa ttggaaataa
    16501 aataacgtgg gctacggata accatcagtt ttcggttcgt tttaatgaat caacaaaaaa
    16561 caattattgt acctatctta tgcgtaaagg agaccgttgg cgtgtaggga ttactgaact
    16621 ctataactcg aggggatttg gtttgaaaac gagacttcgt ggagagaaag gtgaagaggc
    16681 ttgggtcatt gatgtatttg atgataaagt aacagcccag tgccacgaac agttattagc
    16741 cctcaagtac ggtattcctt atactcattg ggaaatggat agaggacttc caaagaaaga
    16801 aactcaacgc acatctcatc atgtcgatat gatttatgat aacttggata gccaaattca
    16861 attagataat gctagacgtt tgcttgttga ctatggtcga aatatcaaat acccactcat
    16921 tcacaaagga aatggacatg aggcatttag taaacgagta actgctcgca tcaatgcttg
    16981 taatctgatc cctcaaatta tgcaagttcc aattccaaaa acttatgaaa aggaaacgag
    17041 agaaaatttt tactggggcg taattgatga ggttcttaca aaaggattca gtggacctgt
    17101 ttattctctt gctgttgaaa aatatgaaca ttatattgca gatggaattg ttactcataa
    17161 ctgtctttat ggctggaaac aaaagggaaa acatcaatgg ttcagtgacc gtaaacaaac
    17221 aaccatttgg gaatatgacc gtccaaaatc tagtaaagac cacccaacaa tgaaacccat
    17281 tccgctcatg gcctatccta ttcaaaattc atcgatgcga ggaacgcttg tcctagatcc
    17341 atttcttggt tctggttcaa ccctaatggc cgcagaccaa actggaaggg tttgttacgg
    17401 cattgagttg gatgagaagt ttgtggatgt cattgtcaaa cgttttatag agtcaacagg
    17461 aaatgacaac gtgacggtat tgcgtgatgg ccagactttg acctttgatg aagcgatttc
    17521 catattagca aacgaataat tatcgaaata tcatcaaaat aatcgagaaa tgactggata
    17581 tatgtttcct ttagagttaa tatgtacaca acaaaagaag aggagaacaa aaccatgaca
    17641 acaacacttg aaaaactcta tgaaatctac ccaacaaccg caagcatcat tccttacaag
    17701 gaatgggtta tcgttgcatc caaaggaaac aaagaaacag tagttgagat ttacgaaacg
    17761 gttgatagcc ttgaagaatt tgaactattt gaatgccgac taaaccgcat atacaaggaa
    17821 tcaataattg ttacggatct tggtcacgct gttaagtggg catttgataa gattggagaa
    17881 taacatggat gcaaaaatat tcaactacct aaagacaatc tatcctgttg ggactaaggt
    17941 tagattagtt aaaatggatg acccccatcc agttcccaaa ggaactcttg gaactgttat
    18001 tggagtagac gacattggct cactcttagt taagtgggaa aatggcagtt gcctgaatgt
    18061 tttgtatgga attgatatcg tggaaaaggt aaagtaaggt gtgggaaata atgactcgaa
    18121 cggttggtga taggcattac gtttgtgaat ttctccgtga agatacaaca gacccgagaa
    18181 atatagacgg tgcttggatt agaattctga caataaaacg tgatggtgaa tatatctaca
    18241 aatatagata tgggaacgaa atagataaca tggacgatat tgacagaaca gtttgtcagg
    18301 ctgttcttga taactttaat gaactttagg aaggaactcg aattgagttc ttttttctta
    18361 ctctaaagga ggtgagattg tggcaatcag ggggcgaaaa ccaaagccaa cgaatatgaa
    18421 aatacttgag ggaaatcctg gtaagcgacc acttcctaca aatgaagtca aacctaacca
    18481 aaaagcccca cgttgcccac agtggcttga agatgatgca aagaaggagt ggaaacggat
    18541 gggaaaaatt ctcgaacaaa tgggaatttt gactgaaatg gacatgactg catttgcagg
    18601 atattgtcaa gcttacgctc gctggaaaga ggcagaagag ttcctttcca agcatggctc
    18661 cattatcaaa accccgaatg gctatctcca acaagttcct caagtctcta tcagccagac
    18721 taacctcaaa atcatgctta aattctgtga acaatttggt ttgacacctt cggcacgaaa
    18781 ccgattagca acgatggatt cagaagttgg tattggtgat gaaatggaag atttgttagg
    18841 aggaatttta tgagctatca ttatgaacca agtccattca tgcttccaac ctcacactat
    18901 gatgaggcaa aggctgacag ggcagtaaca tttatcaata acctctccca caccaaaggt
    18961 aagtgggcag gaaagcgatt tgatttgttg ccgtggcagg aacagattgt ccgtgaccta
    19021 tttggaattg tcaaggaaga tggcaatcgc caattcctaa cagcctatat agaaattcct
    19081 aaaaagaatg gcaagtctga gctagcagcg gctatcgctc tttatttatt atatgcggat
    19141 aatgaagcca gtgcagaagt ttatggtgcg gcttgtgacc gaaaccaagc gtcaatcgta
    19201 tttgatgtgg ccaagcagat ggtgcagatg agtagaccgc ttgagaaacg ctcaaagatt
    19261 atgggggcga caaagaggat agtgaattat tccaatgcgg gattttacca agttctttct
    19321 gcagagactg ggacaaagca tggattaaac gtatctggct tggtctttga tgaaatccat
    19381 gctcagccaa atcgtcattt gtatgatgta ttgaccaaag ggtcaggaga tgcaagggaa
    19441 caacccctct tttttattat cacaacagct ggaacggata gaaactctat ctgttatgag
    19501 ttacatacca aagcattaga tattctgaat gatagaaaga aggacacgtc attctatcca
    19561 gtggtttatg gtttatctga tgaagatgat tggaatgatg aagccaactg gctcaaagcc
    19621 aacccttcac ttgggcatac aattgggatt gatcgtgtaa gagaagccta ccaacaagca
    19681 cttgataatc ctgcagaaga gaatgtcttt aagcagctcc gtctaaatat gtggacaagc
    19741 tcaagcgttg cttggattcc tgaacatgtc tatgccaagg gaaatgatcc tattcaatat
    19801 gaaagcctca agggtcgtag ttgctatgca gggctagacc tgtctagtac gtccgatata
    19861 acagcttttg tcttggtatt tcctcctaga tttgaagagg aaaattatat cgtattgcca
    19921 tacttttggc tacctgagga tacattggaa ctgcggtgtc gacgtgacca tgttctgtac
    19981 gatgtctggg agcgtcaagg ctacatcaaa actacagagg gtaatgtcgt tcactacggt
    20041 tttatcgaaa agtttattga agacttatcg gaaatttatc atatcaagga gatagcctat
    20101 gaccgttgga atgcgacaca gatggttcag aatctagaag ggatgggctt gaccatggtg
    20161 ccttttggtc agggatacaa ggatatgagt ccaccatcaa aggaacttta taaacttatg
    20221 atggaaggca agattcaaca tggtgggcat ccagttctga aatggatggg acaaaacgta
    20281 gtcatgagac aagaccccgc tggtaatatc aagcctgata aggaaaagtc agtcgagaaa
    20341 attgatggta ttgtagcact cattatggga ctggaccgtt gtattcgtca tcaaagcgat
    20401 gaaggaagtg tgtatgatga acgtggaata ttgagttttt agttgaattt aaaaggtaag
    20461 catgatagaa tgtatttaca aatcatcttt acaatgaggt aagaactatg gcaagcacac
    20521 agcccgtcaa ctttagagca gattcaactt tttataaaca aactaaagaa attttagcag
    20581 atgaaaagct gactctgtct gatatcttca atgctgctct tcgtaaaatt gcgactggag
    20641 cagttgatcc caaagagttc gtaaacagtg atttacaaga gacgcagtat caagttgctt
    20701 ttgaagactt gaaaaaggaa attctaattg gccatcaaga aattgagcaa gggaaactaa
    20761 catctttagc tgatgtgaga aaggaatttg gtcttgaata atcataaacg ataccatgtt
    20821 tcccttacgg atcaagccaa aagggactta ggagggattc atgactatat tttacataat
    20881 ttctatagtc aacaatctgc cgacagcaaa ctagacctta tcctaactgc acttgaaact
    20941 ctagagacct ttcctgaagc atgtcctttg gtgtctagtc gtggttacgg ggaattgaca
    21001 gatgatggca aacggtaccg atatatgcca atcgagaatt atctagcttt ttattacatt
    21061 gataaccatg aggtttatgt tgcaaggatt ttgaactcta agcaaaattg ggctaaatta
    21121 ttcaataaat aacggccatt tttctatgcg aaaattaagg aaaaggtatt ctcagtggtt
    21181 ataaaaaata atattcccat aaataaatct gatgactgtt attgtctatt agatatggaa
    21241 caggcaacac ctacagttgt tgaacaatca acattggatg atgttacaac ttcggttttt
    21301 tcacgccata ttgatgcttt tagagagttg gcaaaatagg aatgttgact attgcacaga
    21361 acagtaaatt gtaatgatgt tagttgaaat ttcatatcac aattcaatgc atctccaaag
    21421 gggaggtgct tttttcgtac tcaaaaggag gaagtatggg actactagat ttactgggac
    21481 gtaagcgtgc tagagataaa ccacgaaata gctatgaagg tcaggacttc tcatatctat
    21541 ttggacgaac gaccagtggg gagaatgtgg acgagtttaa agctatgcag acaacagctg
    21601 tttatgcttg tgtccgcatc ttagctgaag cagttgcttc actacccatt catgtttatg
    21661 agagaacggc aactggaaag gagaagaagg tggaacatcc cctttatttt ctcttacatg
    21721 atgaacctaa ccctgagatg tcatcttttg tctttagaga aaccttgatg acccatctat
    21781 tgatatgggg caatgcctat gtccagatta tccgagatag gagtggacag gtaatcagtc
    21841 tttacccact cttaccagat aagatgtctg ttcatcggga cgaaagtgga aagctctatt
    21901 acaaatacaa gcgtcagtca gaagaaaatc ctaactttaa ggaaaaggga gatgctatct
    21961 tgagagcaga agatgttctt catgtacctg gtcttggttt tgatggcttg atcggttatt
    22021 ctccaattgc ccttgcaaaa aatgccatcg gtatgacctt ggctacggaa aactatggtg
    22081 catcattctt taaaaatggt gcaaatcctg gtggtgtttt ggaacatcca gggattctca
    22141 aggatcccaa acgagtgaga gattcatgga atgcagtcta caatggggta accaatgccc
    22201 ataaagtggc agttcttgag gaagggatga aatacactca aataggcatt ccacctgaag
    22261 aagcccagtt tctccaaact agaaaattcc aaattaatga aattgcaagg ctctaccgca
    22321 ttccacctca tatggttggt gacttggaga aatcctcatt ttcaaacatt gagcaacaat
    22381 ctctagaatt tgttaaatat accttagacc cctgggtagt tcgtctcgaa caggctttca
    22441 agaggtctct ttttttaccc gaagaaaaga aatcctactt tgtgaagttt aatgtggatg
    22501 gtcttcttcg tggtgattat cagagtcgaa tgaatggtta tgcgattggg agacaaaatg
    22561 gctggctgtc gacaaatgat atacgtgaac ttgaggactt gaatctcctt tcagatgagg
    22621 aaggaggtaa tctatacttg ataaatggaa acatgacgaa actgaaggat gcaggtggct
    22681 ttatgaaaca agcaccgtta gaacaagaaa cccaatctga ggaggaattg gatgcataag
    22741 ttttggaatt ttacagaaga tgatagtggt cgaacacttc gtattgaagg acagattgct
    22801 gatgagacgt ggtttggcga tgaagtcacg ccacaagtat ttaaaaatga tttacatgca
    22861 ggaagtggag acctcaccct ctggattaat agtccagggg gtgatgtttt tgcggcggct
    22921 caaatctata acatgttgat ggattacaaa ggtgatgtcc atgtcgtaat tgatggctta
    22981 gccgcaagtg ctgctagtgt cattgccatg gcaggtacaa cggtttctat gagtccagtt
    23041 gccatgatga tgattcacaa tccttggaca gtcgcacaag gtgaagccaa ggatatgcag
    23101 aaggtcattg aaatgttggg agagattaag gaatccatca tcaatgccta tgaactaaga
    23161 acaggactgt caagaactaa gctttcgcat ctaatggatt cggagtcgtg gttcaatgcc
    23221 aaaaaggctg ttgaactggg ctttgcgga
//
LOCUS       DBNFCX010000031        21695 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.031, whole genome shotgun sequence.
ACCESSION   DBNFCX010000031 DBNFCX010000000
VERSION     DBNFCX010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 21695)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21695)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21695
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.031"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(106..954)
                     /locus_tag="AC1PJC_001047"
     CDS             complement(106..954)
                     /locus_tag="AC1PJC_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase"
                     /protein_id="HIP6620040.1"
                     /translation="MTVIDGKALGVKMQAALAEKTARLKEEKGLVPGLVVILVGENPA
                     SQVYVRNKERSALAAGFKSEVVRVPDTISESDLLDLIERYNQDDEWHGILVQLPLPAH
                     ISEEKVLLAIDPDKDVDGFHPTNMGKFWSGHPVMIPSTPAGIMEMFKEYQIELEGKSA
                     LVIGRSNIVGKPMAQLLLDANATVTIAHSRTKNLPELARQADILVVAIGRGHFVTKEF
                     VKPGAVVIDVGMNRDENGKLIGDVKYDEVSEVASYITPVPGGVGPMTITMLMEQTYEA
                     CVRSAK"
     gene            complement(1084..1818)
                     /locus_tag="AC1PJC_001048"
     CDS             complement(1084..1818)
                     /locus_tag="AC1PJC_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019805208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015424 - ABC-type amino acid transporter
                     activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HIP6620041.1"
                     /translation="MSNAIISIKDLHKYFGKNEVLKGIDLDIQQGQVVVIIGPSGSGK
                     STFLRTMNLLEVPTKGTVTFEGVDITDKSNDIFKMREKMGMVFQQFNLFPNMTVLDNI
                     TLSPIKTKGIAKDEAEKKAKELLEKVGLPDKANAYPQSLSGGQQQRIAIARGLAMDPD
                     VLLFDEPTSALDPEMVGEVLAVMQDLAKSGMTMVIVTHEMGFAREVADRVIFMDGGVI
                     VEDGTPEEVFEHTKEERTKDFLSKVL"
     gene            complement(1811..2500)
                     /locus_tag="AC1PJC_001049"
     CDS             complement(1811..2500)
                     /locus_tag="AC1PJC_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HIP6620042.1"
                     /translation="MNFSFLPEYWAYFNYGAIVTLIIAFFSVFFGSILGVLLAFAQRS
                     KYKVLAWTANIYVWIFRGTPMIVQIMIAFAMTHFVAPTFQLGILTVDLTRLIPGIIVI
                     SMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKQAMRYVIMPQAIKNILPALGNEF
                     VTIVKDSSLLSTIGVMELWNGAQTVQSTSYIPLTPLVFAASYYLIMTTVLTVIIQSFE
                     KKLNKGGQFHV"
     gene            complement(2626..2856)
                     /locus_tag="AC1PJC_001050"
     CDS             complement(2626..2856)
                     /locus_tag="AC1PJC_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005592360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1797 family protein"
                     /protein_id="HIP6620043.1"
                     /translation="MESHLVRIINRLEAMANDGGTLKRNFERDGIVVAEVAYSYDEEN
                     GSVFTLRDVAARETYAFDSIDLIAMEIYELLY"
     gene            3080..5308
                     /locus_tag="AC1PJC_001051"
     CDS             3080..5308
                     /locus_tag="AC1PJC_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HIP6620044.1"
                     /translation="MLCKNCNINDATIHLYTNLNGKQQQVDLCHNCYQIMKTDPNNAI
                     LRGLGDLTNPNNMDPFNEFFNHLGGYPGNTPAGKNREQTPPTQAGGHNGRGGQTPPPQ
                     QPQQPNGLLEEFGINVTEIARRGDIDPVIGRDQEITRVIEILNRRTKNNPVLIGEPGV
                     GKTAVVEGLAQKIVDGDVPQKLRDKEVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRN
                     RREIILFIDEIHEIVGAGSAGDGNMDAGNILKPALARGEMQLVGATTLNEYRIIEKDA
                     ALERRMQPVKVEEPSVEETITILKGIQNKYQDYHHVKYSDAAIEAAAVLSNRYIQDRF
                     LPDKAIDLLDEAGSKMNLTLNFIDPKEIDQRLIDAENRKAQATRDEDYEKAAYFRDQI
                     AKYKEMQKATISEEDIPLITEKEIEAIVEQKTNIPVGDLKEKEQSQLVNLASDLKAHV
                     IGQDEAVDKIAKAIRRNRVGLGAPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADS
                     MIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEKVRRNPYSLILLDEVEKAHPDV
                     MHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKVEASVGFGAAMEGRTQSVLG
                     QLSNFFTPEFMNRFDGIIEFQPLSKENLLEIVSLMLDDVNKRLSHNGISLHVTDKVKE
                     KLVDLGYDPKMGARPLRRTIQDQIEDAITDFYLEHPAEKDLRAVMSSKGTIQIKAQTK
                     TK"
     gene            5494..5955
                     /locus_tag="AC1PJC_001052"
     CDS             5494..5955
                     /locus_tag="AC1PJC_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HIP6620045.1"
                     /translation="MEKIAVFGEKKAGVSYQSRFGVYAVIPDEKKEQIILVQAPNGAW
                     FLPGGEIEKGENHLIALERELMEELGFTAEIGKYFGQADEYFYSSHRDTHFYNPAYIY
                     EVTSYHQIGQPLEDFNHIAWFPVNEAIDKLKRGSHKWGIEQWKLQENSFNN"
     gene            6010..6318
                     /locus_tag="AC1PJC_001053"
     CDS             6010..6318
                     /locus_tag="AC1PJC_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1827 family protein"
                     /protein_id="HIP6620046.1"
                     /translation="MKIINTTNSHPNLVQSQLANTDAFLVETYSAGNTDVIFTQAPRH
                     YELLISNKYRAVQQNEIEQIRDFFLHRKIDERTINKAAIQTIHTDRLIEMSIPIIAEV
                     "
     gene            complement(6697..9486)
                     /gene="ileS"
                     /locus_tag="AC1PJC_001054"
     CDS             complement(6697..9486)
                     /gene="ileS"
                     /locus_tag="AC1PJC_001054"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004822 - isoleucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006428 - isoleucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HIP6620047.1"
                     /translation="MKLKETLNLGKTAFPMRAGLPTREPEWQKAWDEANLYARRQELN
                     EGKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFRAPFVPGWDTHGLPIE
                     QVLAKQGVKRKEMDLVEYLEMCRDYALSQVDKQRDDFKRLGVSADWENPYITLTKDYE
                     AAQIRVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKVKDGK
                     GLLDTGSYIVVWTTTPFTVTASRGLTMGADIDYVLVQPAGSDRKYVLAEALVDSLAAK
                     FGWESFEVISKHKGAEFEYIVTEHPWDAEVDELVILGDHVTTDSGTGIVHTAPGFGED
                     DYNVGVKYNLEVAVTVNERGLMNEAAGPDFEGQFYDKVVPTVKEKLGDLLLASEVINH
                     SYPFDWRTKKPIIWRAVPQWFASVSKFRQEILDQIEATTFNPSWGKTRLYNMIRDRGD
                     WVISRQRAWGVPLPIFYAEDGTAIMTKEVTDHVAALFEEHGSIIWWKSDAKDLLPAGF
                     THPGSPNGEFTKETDIMDVWFDSGSSWNGVMNARENLAYPADLYLEGSDQYRGWFNSS
                     LITSVAVNGHAPYKAVLSQGFVLDGKGMKMSKSLGNTILPSDVEKQFGAEILRLWVTS
                     VDTSNDVRVSMDILGQVSETYRKIRNTLRFLIANTSDFNPASDAVAYEELRSVDQYLL
                     VKFNKLVAQIREAYDNYDFMGIYKSVVNFVTLDLSAFYLDFAKDVVYIDGAKSLSRRQ
                     LQTVFYDILVKITKLLTPILPHTAEEIWSYLEHEAEEFVQLAEMPEVETFANEAQLLA
                     DWENFMNFRTQAQKALEEARNEKVIGKSLEAHLTAYVSAETKSFLESLNADLAQLLIV
                     SNLTVTTEAAPESAVLVEEVAFTVERASGEVCDRCRRIDTSVAERSYGATICDHCASV
                     VEENFAEAVAQGFEA"
     gene            complement(9497..9940)
                     /locus_tag="AC1PJC_001055"
     CDS             complement(9497..9940)
                     /locus_tag="AC1PJC_001055"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIP6620048.1"
                     /translation="MIRLELVNKDNFEAVLQVQLAPEDQRRVASVEYSLAQAWLYKDS
                     GMILPYAVVSGRKVVGFAMLSIEPKDNSYYLWRLLIDKDFQNRGCGKEAIQQIIGKAK
                     ADPLCHKISINYVIGNHKMRYILEKLGFQSVGLEGQEMKMELIIR"
     gene            complement(10172..10861)
                     /locus_tag="AC1PJC_001056"
     CDS             complement(10172..10861)
                     /locus_tag="AC1PJC_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DivIVA domain-containing protein"
                     /protein_id="HIP6620049.1"
                     /translation="MALTALELKDKTFATKFRGYDADEVDDFLDIVTRDYEDLIRKNH
                     DQELELKNLRERLAYFDEMKESLSKSVLLAQDTAEKVKVAAEDQAANIIKQADYDAAT
                     LLHEAKDKANEILRNATDNAKKVVIETEELKNKTRIFHQRLKSTVESQLSLVNSSEWE
                     EILRPTASYIQTSDEAFRDVLHKALDEELPVEEESLDYTRQLTPEEIAELTRQAAAFE
                     SGESVEISTEE"
     gene            complement(10870..11661)
                     /locus_tag="AC1PJC_001057"
     CDS             complement(10870..11661)
                     /locus_tag="AC1PJC_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HIP6620050.1"
                     /translation="MKNDKNLLQHFSREEREFVEKIMDMCQQVEDTYSYRLTQFLHPR
                     QDEIVCKIANYYQLQTFSSRDFVSTEHSRVIIAPAYYELDIKDFELTALHLSYARKFH
                     TLSHSQVLGTFLNQLGIKREYLGDILIDDERLIVFIDQKFGQIALQSITKVARVPVKG
                     KEEEWTTVRLPIGQEWRSKDVLVSSMRLDKLISVAFNLSRATANKLIEAGHVKLDYVL
                     TEQTSKLVEIGQLISVRRYGRVRLNEFLGFSKQGKIKLKLDIVKT"
     gene            complement(11664..11927)
                     /locus_tag="AC1PJC_001058"
     CDS             complement(11664..11927)
                     /locus_tag="AC1PJC_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HIP6620051.1"
                     /translation="MQILIFLLLKIVEIYSYLLLAYALLSWFPSLYTSSIGRLIQWLV
                     APILKPFRRFNLQFMGLDWTVMAAMIALNMGTRFLVQLLLLLA"
     gene            complement(11932..12495)
                     /locus_tag="AC1PJC_001059"
     CDS             complement(11932..12495)
                     /locus_tag="AC1PJC_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA];
                     GO_process: GO:0090529 - cell septum assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein SepF"
                     /protein_id="HIP6620052.1"
                     /translation="MALKDTFKNLFNYFEVDEVNEVEEQADAYSMPNDRPKMRVANTT
                     AAPVREQQPKVETRREARSESQLQRLHERQQELMTNNNEKEIVKTTIDIKFPKRYEDA
                     PEMVNLLLDNASILIDFQYMSEQQARRCLDYLDGARSVLSGNLKKVSNTMWLLTPVNV
                     TVNIEELRNAGTTTGVADSNFDFDIKR"
     gene            complement(12512..13183)
                     /locus_tag="AC1PJC_001060"
     CDS             complement(12512..13183)
                     /locus_tag="AC1PJC_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HIP6620053.1"
                     /translation="MNFQKNKDAIFSAVAKAAEKAGRPSESVKVIAVTKYVDSSIANQ
                     LVNTGITHIGENRVDQFLEKYNALADKQLTWHLIGTLQRRKVKDIIPFVDYFHALDSV
                     KLAQEIDKRATKLVKCFLQVNVSGEESKHGFAVSEIDAALAEISLLENIELVGLMTMA
                     PIDATDDELDEIFSKMQEIQEELATRNLPRMPFTELSMGMSGDFERAIAHGATYVRIG
                     SAFFE"
     gene            complement(13190..14419)
                     /gene="ftsZ"
                     /locus_tag="AC1PJC_001061"
     CDS             complement(13190..14419)
                     /gene="ftsZ"
                     /locus_tag="AC1PJC_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002263818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HIP6620054.1"
                     /translation="MAFSFEAAASHGAVIKVIGVGGGGGNAINRMIEEGVAGVEFIAA
                     NTDVQALSSSKAETVIQLGPKLTRGLGAGGQPEVGRKAAEESEEALTNVLTGADMVFI
                     TAGMGGGSGTGAAPVIARIAKNLGALTVAVVTRPFGFEGNKRGNFAIEGIEGLREQVD
                     TLLIISNNNLLEIVDKKTPLLEALSEADNVLRQGVQGITDLITNPGLINLDFADVKTV
                     MENKGNALMGIGIGTGEDRVIEAARKAIYSPLLETTIDGAEDVIVNVTGGYDMTLTEA
                     EDASEIVNQAAGQGVNIWLGTSIDETMKDEIRVTVVATGVRQDTADKPARHRTEAVSP
                     RPSQRFDHSVASAPTRGVAQQTEAPKASAFGEWDLRRENLIRPTDAEPTSTVSVEKFT
                     MDQDEDELDTPPFFRNR"
     gene            complement(14445..15821)
                     /gene="ftsA"
                     /locus_tag="AC1PJC_001062"
     CDS             complement(14445..15821)
                     /gene="ftsA"
                     /locus_tag="AC1PJC_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HIP6620055.1"
                     /translation="MARNGFFTGLDIGTSSVKVLVAEYIDNEMNVIGVSNVKSAGVKD
                     GIIVNIEVAAGAIKKAIEQAEEKSGIRIEKVNVGLPANLLQIEPTQGMIPVTTDSQEI
                     TDLDVENVVKSALTKSMTPEREVISFIPEEFTVDGFQGIKDPRGMMGIRLEMRGMLYT
                     GPRTILHNLRKTVERAGVQVENIVISPLALTRSVLNEGEREFGATVIDLGGGQTTVAV
                     MRGQELQYTNIYQEGGDYITNDISKVLTTSKSIAENLKYNYGIAYPQDASDKEKFTVE
                     VIGENAPVEVTERYLSEVIAARLRQIFDRVKQDLERTRALDLPGGIVLVGGGAILPGI
                     TELAQEVFGVNTKLFVPNQIGIRNPAFASVISFVEYVGELEDVENIAQHAVNGETLLR
                     HKPVEISVTRPRISQPIQKEIVSELNTVEHVDEQVIPAYHDEEEVRPAAKGNITDRIR
                     GLFGSMFE"
     gene            complement(15975..17027)
                     /locus_tag="AC1PJC_001063"
     CDS             complement(15975..17027)
                     /locus_tag="AC1PJC_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HIP6620056.1"
                     /translation="MTERDSNVEESVLEVEQASQVELDSEQISPAEKESIVAEEKGLS
                     TDDEKSAFFEQWKARHQAYLAHKDDVDIQAVDEGQTEQEIPEAKKSKRVLFQGINRRQ
                     ESLESKKETEKEVQPLKADIPSKVVWKAVPVLVTSLLLAALALYFISPTSKKKQIEVV
                     GNERLTAEQVENYSLISPDDYIVTIALHADAYAKNIKKNSSSVETATIKFQFPATFTI
                     QIKEYAIIGYIQQQSQWYPVLSSGEVGGEPVSQDSLPEGYTTINLSDKELIKELAIEL
                     GKIDAGIRSAIQTINLTPSKVTADLLTLNMADGNTVLVPLSEISQKLPYYTQIAAEVT
                     VPTTIDMEVGIYRYAS"
     gene            complement(17033..18097)
                     /locus_tag="AC1PJC_001064"
     CDS             complement(17033..18097)
                     /locus_tag="AC1PJC_001064"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_function: GO:0051991 -
                     UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-
                     glutamyl-meso-2,
                     6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol
                     4-beta-N-acetylglucosaminlytransferase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0030259 - lipid glycosylation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine--N-acetylmuramyl-
                     (pentapeptide) pyrophosphoryl-undecaprenol
                     N-acetylglucosamine transferase"
                     /protein_id="HIP6620057.1"
                     /translation="MKKIVFTGGGTVGHVTLNLLLIPRFLEEGWEVHYIGDGNGIEHE
                     QVVKSGLDVHFHSISTGKLRRYFSFQNMLDVFKVGFGVLQSLAIIAKIRPQALFSKGG
                     FVSVPPVIAANLLRVPVFIHESDLTMGLANKIAYKFATTMYSTFEQPASLTKVKHVGA
                     VTKVGQTNDKVTPIQLPEILSHFDKSLPTLLFVGGSGGAKVFNDLISQNSAALTERFN
                     IINLTGDSSLNQLDKNLYRVDYVTELYQPLMDLADVVITRGGSNTLFELIAMQQLHLI
                     VPLGRQASRGDQIENALYAEKKGYSKQIDESQLTFASLLVEVDELLKHKEFYIQNMAN
                     SNEIQSVDSFYNLLREDMGR"
     gene            complement(18100..19449)
                     /gene="murD"
                     /locus_tag="AC1PJC_001065"
     CDS             complement(18100..19449)
                     /gene="murD"
                     /locus_tag="AC1PJC_001065"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HIP6620058.1"
                     /translation="MKMIDIVKNKKVLVLGLAKSGESAARLLDKLGAIVTVNDGKPFE
                     ENPTAQSLLEDGIRVICGSHPLELLDEDFALMVKNPGIRYDNPMVEKAIGKGIPVWTE
                     VELAYLVSDAPIVGITGSNGKTTTTTMIAEVLNAGNKPAKLCGNIGYPASSVAQTATA
                     EDTLVMELSSFQLMGTESFRPHIAVVTNLIASHIDYHGTFEDYVAAKWMIQRQMTAED
                     FVVLNFNQKEAKELAGQTKATVVPFSTQEVVDGAYLAEGKLYFKGEYIMDADQIGVPG
                     SHNVENALATIVVAKLLGVDHQAIQESLSAFGGVKHRLQFVGEINGVSFYNDSKSTNI
                     LATQKALSGFDNSKVILIAGGLDRGNEFDELVPDLVGLKKMVILGQSAPRVQRAADKA
                     EVETIEALDIADATRKAFAIAEKGDIVLLSPANASWDMYANFEVRGDVFLQTFEELK"
     gene            complement(19547..19837)
                     /locus_tag="AC1PJC_001066"
     CDS             complement(19547..19837)
                     /locus_tag="AC1PJC_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018378527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3165 family protein"
                     /protein_id="HIP6620059.1"
                     /translation="MFYLILAIMLVLFYIFIAPRNIKGTMNLIAAVFLLVALAIALVL
                     GFLRIMQFSKEIWVGLLMILIGFWAMRDIYYLDKEPKDRQRRTEQPGPYRYR"
     gene            complement(19855..>21695)
                     /gene="typA"
                     /locus_tag="AC1PJC_001067"
     CDS             complement(19855..>21695)
                     /gene="typA"
                     /locus_tag="AC1PJC_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002932699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HIP6620060.1"
                     /translation="LREDIRNVAIIAHVDHGKTTLVDELLKQSQTLDERTQLDERAMD
                     SNDIEKERGITILAKNTAVAYNGTRINIMDTPGHADFGGEVERIMKMVDGVVLVVDAY
                     EGTMPQTRFVLKKALEQNLTPIVVVNKIDKPSARPEEVVDEVLELFIELGADDDQLEF
                     PVVYASAINGTSSLSDNPADQEETMAPIFDTIIEHIPAPVDNSDEPLQFQVSLLDYND
                     FVGRIGIGRVFRGTVKVGDQVTLSKLDGTTKNFRVTKLFGFFGLERKEIQEAKAGDLI
                     AVSGMEDIFVGETVTPTDAVEPLPVLRIDEPTLQMTFLVNNSPFAGREGKWVTSRKIE
                     ERLLAELQTDVSLRVDPTDSPDKWTVSGRGELHLSILIETMRREGYELQVSRPEVIIK
                     EIDGVKMEPFERVQIDTPEEYQGSVIQSLSERKGDMLDMVATGNGQTRLVFLVPARGL
                     IGYSTEFLSMTRGYGIMNHTFDQYLPVVQGEIGGRHRGALVSIDQGKATTYSIMRIEE
                     RGTIFVNPGTEVYEGMIIGENSRENDLTVNITTAKQMTNVRSATKDQTSVIKTPRILT
                     LEESLEFLNDDEYMEVTPESIRLRKQILNKAERDKAAKKKKLATEE"
BASE COUNT         6366 a         5053 c         3921 g         6355 t
ORIGIN      
        1 tcttggtcga gttctttccc actcccgtac cacctctctg atttcgtctt cccactccca
       61 aaataaaaaa taccagctac accacatagc tgatatttca gataattatt ttgcacttct
      121 gacacaagct tcataggtct gttccatcaa catggtaata gtcatcggac caacaccacc
      181 tggaactggg gtaatataac tcgccacttc tgatacctca tcgtatttga catcaccgat
      241 tagcttgcca ttttcatcac gattcatacc aacatcaatc accacggcac ctggcttaac
      301 aaattccttg gtcacaaaat gaccacgacc aatggcaaca acaagaatat cggcctgacg
      361 agcaagctct ggcaagtttt tggtacgaga atgcgcaatc gttacagtag cattggcatc
      421 caatagcagc tgtgccatcg gtttaccaac aatattagaa cgaccaataa ctaaagctga
      481 cttcccttcc agctcaatct gatattcctt gaacatttcc ataattcctg ctggggtaga
      541 tggaatcata acaggatgac ctgaccaaaa tttccccata ttagtcggat gaaaaccatc
      601 cacatcctta tctgggtcaa tggccaacaa gaccttctcc tcgctgatat gggctggtaa
      661 gggcaattgc accaaaatac catgccattc atcatcctga ttatagcgct caatcaaatc
      721 caacaagtct gactcagaaa tcgtatctgg aacgcgaaca acctcactct tgaatccagc
      781 agctagagct gaccgctcct tattccgtac ataaacctga ctagcaggat tttcgccaac
      841 taaaataact acaagacctg gtaccaaacc cttttcttct tttaatcgag cagttttctc
      901 cgccaaggca gcctgcattt ttacacctag tgctttccca tcaatgactg tcatacctac
      961 actccttttg ttttttctat tataccctaa aattctccga ctgactatac ttgtccaaag
     1021 tagaatagag catataacaa aaaactccga acaatatcgg agtcgtactt atttgttcat
     1081 ttattacaag accttagaca agaaatcctt ggtccgttct tccttggtat gttcaaaaac
     1141 ttcttcaggc gttccatcct ccacgatgac accgccatcc ataaagataa ccctgtcagc
     1201 tacctcacgc gcaaatccca tctcatgagt cacgataacc atggtcatcc ccgacttggc
     1261 taaatcctgc ataacagcaa gaacttcacc aaccatttca gggtctagtg cagaggtcgg
     1321 ttcatcaaaa agcaggacat ctgggtccat ggccagacca cgtgcaatag cgatccgttg
     1381 ttgctgacca cctgaaaggc tttgtggata ggcatttgcc ttatctggca atcctacctt
     1441 ttcaagtaat tccttagcct tcttctcagc ctcatccttt gcaattccct ttgtcttaat
     1501 aggtgataaa gtaatgttat ctaataccgt catattcgga aaaagattga actgttgaaa
     1561 aaccattccc atcttttcac gcatcttgaa aatatcattt gacttgtcag taatatcaac
     1621 accttcaaat gtaacagttc ccttggttgg cacttctaag aggttcattg tacgtaagaa
     1681 agtcgatttc cctgaccctg atggaccgat aataacgacc acctgacctt gttgaatatc
     1741 taaatcaatt ccttttagaa cctcattctt tccgaagtac ttatgtaaat ccttgataga
     1801 aataatcgca ttagacatgg aactgccctc ccttgttcaa ctttttctca aacgactgaa
     1861 taatcactgt tagcaccgtt gtcataatta gataatagct cgctgcaaat acaagtggtg
     1921 ttaaaggaat atacgaagtg gattgaactg tctgtgcacc gttccataat tccatcacac
     1981 cgatggttga caaaagtgaa ctatccttaa caatagtcac aaattcattt cccaaggctg
     2041 gaagaatatt cttgatagcc tgtggcatga taacgtaacg catcgcctgc tttggtctaa
     2101 taccaagcga ataagctgct tccagctgtc cttttggtac agcattaata ccagcacgaa
     2161 cagtttcaga tacataggca cccgagttca tcgaaataac aatgatacct ggaatcaagc
     2221 gcgtcaaatc aaccgtcaaa attcctagct gaaaagttgg tgctacaaaa tgtgtcatcg
     2281 caaaagcaat cataatctgg acaatcatcg gtgtcccacg gaaaatccag acatagatat
     2341 tggcagtcca agctaaaact ttatacttac tacgctgagc aaaggcaagc aacacaccta
     2401 aaatactacc aaaaaatact gagaaaaatg caataatgag ggtaacaatt gccccataat
     2461 taaaataagc ccaatactca ggcaaaaaag aaaaattcat tcatcttact ccaattctgt
     2521 catttagagt ctattatatc atttttgaat atttatgcaa tacttttgtt tataatattc
     2581 aatttacaca agaaaaaagc acccttaggt gcctctcact tcttcttagt acaatagctc
     2641 atagatttcc attgcaatca agtcgatgct gtcaaacgcg tacgtttcac gagcagcaac
     2701 atcacgcaag gtaaatactg aaccattttc ctcgtcatag ctataagcca cttctgcaac
     2761 aacaatacca tcacgttcga aattacgttt caacgtaccg ccgtcattag ccatagcttc
     2821 cagacgattg ataattctca ccaaatgtga ttccatattc gttctcctaa tcctttttat
     2881 aggaatattt taccacatat tgccaaaaaa gtcttatttt ttccctattt tcttcctatc
     2941 gccctatttt tcatagaaag tttttccaag cgtagcagtt tcttgatttt tctatgaatc
     3001 ttgttataat aaagctagaa ctgacctttt ttgactattt aacaataggt cacatttttt
     3061 cacagaaaga ggtagaatta tgctctgcaa aaattgtaat atcaacgacg caacgatcca
     3121 tctctacacc aacttaaacg gtaaacagca gcaggtagac ctctgtcaca actgctacca
     3181 aatcatgaaa acagacccta ataatgccat cctacgtggg ttgggagatt taacaaatcc
     3241 taacaatatg gatcccttta atgaattttt caatcaccta ggtggctatc ctggcaatac
     3301 ccctgctgga aaaaatcgcg aacagactcc tcccactcaa gccggtgggc ataatggacg
     3361 tggtggacag acccctcctc cgcaacaacc ccaacaacca aatgggctcc ttgaagaatt
     3421 tggtatcaac gttaccgaaa ttgcccgtcg tggggatatt gatccagtaa tcggtcgcga
     3481 tcaagaaatt acccgtgtca tcgaaattct caaccgtcgt acaaaaaaca accctgttct
     3541 tatcggtgag cctggtgtag gtaaaacagc ggttgttgaa ggcttggctc aaaaaattgt
     3601 cgatggcgat gtcccacaga aattacgaga caaggaagtc attcgtctgg atgttgtcag
     3661 cctcgtacaa ggaacaggta tccgtggaca atttgaagaa cgcatgcaaa aactcatgga
     3721 agaaatccgt aatcgtcgcg aaatcattct ttttattgac gagattcacg aaattgtcgg
     3781 tgctggctct gcaggcgatg gtaacatgga tgcaggcaat atcctcaaac cagccctcgc
     3841 acgtggtgaa atgcaactag tcggtgcaac aacgctcaac gagtaccgta ttatcgaaaa
     3901 agatgccgcc ctagaacgcc gtatgcaacc tgtaaaagtt gaagaaccaa gtgtcgaaga
     3961 aaccattact attctcaaag gtatccaaaa taaataccag gattaccatc atgttaaata
     4021 ctccgatgct gctatcgaag ctgccgcagt actgtccaac cgctacattc aagaccgttt
     4081 cctaccagac aaagctattg accttctgga tgaagctggt tcaaaaatga atttgaccct
     4141 caactttatt gatccaaagg aaattgacca acgcctgatt gatgccgaaa atcgtaaagc
     4201 acaagctaca cgggatgagg actatgaaaa agcggcctat ttccgtgacc aaattgctaa
     4261 gtacaaggag atgcaaaagg caactatcag cgaggaagat attccactca ttactgaaaa
     4321 agaaattgag gccatcgttg agcaaaaaac aaatatccca gttggtgatt taaaagaaaa
     4381 ggaacagtcc cagcttgtga acctcgctag tgacttaaaa gcccatgtta tcggacaaga
     4441 tgaggcagtt gacaagatag ctaaagccat ccgccgtaat cgtgtcggtc tcggtgctcc
     4501 aaatcgtccc attggatcct tcctctttgt cggaccaaca ggtgtcggta aaaccgaatt
     4561 gtctaagcaa ttagctatcg aactcttcgg ttcggcagac agcatgatcc gcttcgacat
     4621 gtccgaatac atggaaaaac acgctgttgc taaactcgtc ggagctcctc caggctatgt
     4681 aggctatgag gaggctggac aattgactga aaaagtccgt cgtaatcctt actcactcat
     4741 cctccttgac gaagttgaaa aagcccaccc agatgtcatg cacatgttcc ttcaggtctt
     4801 agacgatggg cgtctgacag atggacaagg tcggacagtc agcttcaaag ataccattat
     4861 catcatgaca tcaaatgctg gtactggaaa agttgaagca agtgtcggtt ttggtgcggc
     4921 tatggaaggg cggactcaat cagtccttgg ccaacttagc aatttcttca cacctgaatt
     4981 tatgaaccga tttgacggta ttattgagtt ccaaccactg agcaaggaaa acctacttga
     5041 aatcgtcagc ctcatgctag acgatgtaaa caaacgcctt tctcacaatg gcatcagcct
     5101 ccatgtaaca gataaagtta aggagaaatt agtggacctt ggctacgatc caaagatggg
     5161 agctcgtcca ctacgcagaa ccatccaaga tcagattgaa gatgctatca ccgacttcta
     5221 cttagaacat ccagcagaaa aagacctacg tgctgtcatg tcaagtaaag gtacaattca
     5281 aatcaaggca caaacaaaga caaaataaga aaatagagct gctccctacg agtagcctat
     5341 tttactgttt tgatactcta ttcttctaaa tccttcctca tctccatcct ataaaaaaac
     5401 tttactttgt aaagcctatc acaaggaaaa ataataaaaa agtggtataa tgtatacaac
     5461 tcattccaat aatgaaagag gatagaattg cctatggaga aaattgctgt atttggagaa
     5521 aagaaggctg gcgtcagcta ccagagtcgc tttggtgttt acgcagttat cccagatgaa
     5581 aagaaagaac agatcatact cgttcaagca ccaaacggag cttggtttct tcctggtgga
     5641 gaaattgaaa agggagaaaa tcacctcatt gccttggagc gcgaattgat ggaagagctt
     5701 ggattcaccg ctgaaatcgg aaaatacttt ggtcaggctg acgaatactt ctactctagc
     5761 caccgcgata cccatttcta taatccagcc tacatctatg aagtaactag ctaccatcaa
     5821 ataggacaac cactagaaga tttcaaccat attgcttggt tcccagtcaa tgaagccatc
     5881 gataaactca aacgtggtag tcacaaatgg ggcattgaac aatggaaatt gcaagaaaat
     5941 tcattcaata actagtaaaa acactctaat cgtgctataa tgtagccaaa gagatagagg
     6001 aggttccaca tgaaaatcat taacacgaca aatagtcatc ccaatcttgt ccaaagccag
     6061 ttggctaata ctgatgcttt cctagtagag acttattctg caggtaatac agacgttatt
     6121 ttcacacagg caccccgtca ttatgaactc ttgattagta ataaataccg tgcagtacaa
     6181 caaaacgaaa tcgagcaaat tcgtgatttc ttccttcatc ggaaaattga tgaacgaact
     6241 attaacaagg ctgccattca aacgattcac acagaccgct tgattgaaat gtctattccc
     6301 attatcgcag aagtgtaaga agccagatgg cttctttcag attgaagaaa aggtccattt
     6361 tggacaattt tcttcaatct ttttctttat gttgaaaata aaaaactctc agaaacgctg
     6421 aaatatcaat gtttctaagg gtttaatcac ttgctatctt tcgcaaacct cttcaatttt
     6481 tttatatttt taggagtttg tctacgttct gagaagccag atggcttctt tttttctatt
     6541 tatactcaat gaaaatcaaa agtagcctag aaaacgaagc cgaagataaa actggagttc
     6601 atcaaggctc ttgacaacgg ataattttat tttcgaagag tattacaaaa aaaaagccta
     6661 tcgctagata gactttaaca aatgtattgt gattacttaa gcttcaaaac cttgagctac
     6721 tgcttcagca aagttttctt ccactacgct tgcacagtgg tcacagattg tcgcaccata
     6781 gctgcgctct gcaacactag tatcaatacg gcggcaacgg tcacatactt caccgcttgc
     6841 acgctctaca gtaaaggcaa cttcttctac caaaacagca ctttcaggag ctgcttccgt
     6901 ggttactgtc aagtttgaaa cgatgagcaa ctgagcaagg tctgcattca agctctccaa
     6961 gaaggacttg gtttcagctg agacataggc agtcaaatga gcttcaagtg acttaccaat
     7021 cactttttca ttacgcgctt cttccaaggc tttttgtgcc tgagtacgga agttcataaa
     7081 gttttcccag tcagccaaaa gctgcgcttc attggcaaag gtttccacct ctggcatttc
     7141 cgccaattgt acaaactctt ctgcttcgtg ttccaagtat gaccagattt cttctgccgt
     7201 gtgtggcaag attggggtca agagcttggt aattttcacc aagatgtcat agaagactgt
     7261 ctgcagctga cggcgagaaa gtgatttagc accatcaatg tagacgacat ctttggcaaa
     7321 atcgaggtag aaggctgaca aatcaagggt tacaaagttt actacagatt tgtagatgcc
     7381 catgaaatca taattgtcgt aggcttcacg gatttgggct accaatttat tgaatttcac
     7441 caagagatac tggtcaacag aacgaagctc ttcgtatgcc accgcatcac ttgcgggatt
     7501 gaaatcagaa gtgttagcaa tcaagaagcg aagggtatta cggattttac ggtaggtttc
     7561 agaaacctgt ccaagaatat ccatagacac acgtacgtcg tttgaagtat caacggatgt
     7621 cacccacaga cgcaagattt ctgcaccaaa ttgtttctca acatcacttg gaagaatggt
     7681 atttcctaga gatttagaca tcttcatacc tttgccatct aagacaaaac cttgtgacaa
     7741 gacagctttg tatggcgcat gaccatttac ggctacagag gtaatcaagg atgagttaaa
     7801 ccaaccacgg tattggtctg aaccttcaag gtagagatct gctgggtagg caaggttttc
     7861 acgggcattc atgacaccat tccaagatga accagagtca aaccaaacgt ccatgatgtc
     7921 tgtttccttg gtaaattcgc catttggtga acctggatga gtgaaaccag ctggcaaaag
     7981 atcttttgca tcagatttcc accagatgat agaaccatgt tcttcaaaga gagctgcaac
     8041 gtggtctgtc acttccttgg tcatgatggc tgtgccgtct tcagcgtaga agattgggag
     8101 tggcacaccc caagcacgct gacgtgagat gacccagtca ccacggtcac ggatcatgtt
     8161 gtaaagacgt gttttacccc aagatggatt gaaagtcgtt gcctcgattt ggtccaagat
     8221 ttcctgacgg aatttagaaa cagaggcaaa ccactgtggc actgcacgcc agatgattgg
     8281 cttcttggtt ctccagtcaa atgggtagga gtgattgatc acttcactag caaggagcaa
     8341 gtcacctaat ttttccttaa ccgttggtac aaccttgtca tagaattgcc cttcaaaatc
     8401 aggacccgca gcttcattca tcaagccacg ttcgttgaca gttaccgcaa cttccaagtt
     8461 atatttgaca ccgacattgt agtcatcctc accaaaacct ggagccgtat ggacgatacc
     8521 agtaccagaa tccgttgtga catggtcacc caagataacc aattcatcca cttcagcatc
     8581 ccatgggtgt tcggtcacga tatattcaaa ttcagcaccc ttgtgttttg aaatcacttc
     8641 aaaggattcc caaccgaatt tggctgccaa gctatcaacc aaggcttctg ccaagacata
     8701 cttacggtca gagccagcag gttgaaccaa gacatagtca atgtctgctc ccattgtcaa
     8761 accgcgagaa gccgttaccg taaatggagt ggttgtccag acaacgatgt agctacctgt
     8821 atccaagagt cccttgccat ctttgacctt gttagcataa tacagagatg ttgagtcaat
     8881 gtcatggtat tcgatttcag cttctgcaag ggcagactca gatgaccatg accagtagac
     8941 aggcttagca ccgcggtaaa tatagccctt gtctgccata gcaccgaaga cacggatctg
     9001 agctgcttcg tagtcttttg tcaaagtgat atatggattt tcccagtctg cagaaacacc
     9061 caagcgttta aaatcatcac gttgcttgtc aacttggcta agagcataat cacgacacat
     9121 ttcaagatat tcaactaggt ccatttcctt gcgtttaaca ccttgttttg ccaagacttg
     9181 ctcaatagga aggccgtgtg tatcccaacc tggtacaaat ggagcacgga aaccagacat
     9241 tgacttagag cgaacgataa tatctttaga aatcttgttc aaagcatgtc caacgtggat
     9301 atttccgttt gcgtatggag ggccatcgtg gaggtggaag gcaggtttgc cttcattgag
     9361 ttcttggcga cgagcataca agtttgcttc atcccaggcc ttttgccatt ctggctcacg
     9421 tgttggtaag cctgcacgca taggaaatgc tgtcttacct aaattgagtg tttcttttag
     9481 tttcatcata actcctttat cttataatta attccatttt catttcttgg ccttctaaac
     9541 caacggattg aaaaccaagt ttttctaaaa tgtaccgcat tttatgattg ccaatgacat
     9601 aatttataga aattttatga caaagcggat ccgccttcgc ctttccaatt atttgctgga
     9661 tggcttcctt tccgcatcca cgattttgaa aatccttatc aatcaacaag cgccataaat
     9721 aataactatt atctttgggt tcaatagata acattgcaaa accaacaact tttctaccag
     9781 ataccacagc atatggtaga atcatccccg aatctttata taaccaagct tgggctaaag
     9841 aatattcaac cgatgctact cggcgttggt cctcaggtgc aagttgaact tgtaacactg
     9901 cttcaaagtt gtccttgttt actaattcta atcgtatcat aaaaaataaa aaaactcccg
     9961 ccaaataagg acgaaagttc gtggtaccac cttagtttag atagagtttc ccctatccct
    10021 ctatgttcgt aacgtgaacg ggcgtctttc cttactattt tcaggaaaaa tcaaacaaag
    10081 tgatgatcca tagaaagaga ttgtagggct tccaccatct cctactcgct ataaatattt
    10141 ctaccgaccg tgtctctgct tatgatcttt attattcttc tgttgaaatt tctacagatt
    10201 ctccactctc aaaagccgct gcctgacgcg ttaattctgc aatttcttct ggtgtcaatt
    10261 gacgtgtata atccaaactt tcttcttcaa caggtaattc ttcatccaaa gccttatgaa
    10321 gaacatcacg gaaagcctcg tcacttgttt gaatgtaact tgctgttggg cgaaggattt
    10381 cctcccattc agatgaatta accaatgata attggctttc cactgttgat ttcagacgct
    10441 gatggaaaat acgtgtcttg ttttttaatt cttcagtctc aatgacaact tttttcgcgt
    10501 tgtcagtcgc attacgaaga atttcatttg ccttatcttt agcttcatgt aacaatgttg
    10561 ccgcatcata gtcagcttgt ttaataatat ttgccgcttg atcttcggcc gcaaccttta
    10621 ctttctcagc tgtatcttga gctaaaagaa ctgatttact caatgattct ttcatctcat
    10681 caaaataagc caaacgttcc cgcaaatttt tcaattctaa ctcttgatca tgatttttac
    10741 gaattaaatc ctcataatca cgtgttacaa tgtccaaaaa gtcatcaact tcatctgcgt
    10801 cgtatcctct aaattttgta gcaaaggttt tatcttttaa ttctaatgct gtaagtgcca
    10861 tctttcctcc taagttttaa caatgtctaa ctttaatttt atcttccctt gcttagaaaa
    10921 acctaaaaat tcatttaggc gaactctacc atatctccta acactaatta attgccctat
    10981 ttcaactaat ttactggttt gttctgtcag aacataatcc aacttcacat gtccagcctc
    11041 aatcaacttg tttgcagttg cccttgaaag attaaatgcg accgaaatca atttatccaa
    11101 tctcatacta gaaaccaaca catcctttga acgccattcc tgtccaatcg gtagtcgaac
    11161 agtcgtccat tcttcttcct ttcccttaac agggacacga gcaactttag tgatagattg
    11221 taaggcaatc tgcccaaatt tctgatcgat aaagacaatc aatcgttcat catcaatcaa
    11281 aatatcaccc aaatactccc ttttaatccc tagttgattg agaaaagttc caagaacttg
    11341 tgaatgggat aaggtgtgaa attttctagc ataggacaaa tgaagagcag ttaactcaaa
    11401 gtccttgatg tccaactcat aataagccgg agcaataata acccgcgaat gttcagtcga
    11461 aacaaagtcc cgactagaaa acgtttgtaa ctggtagtag ttagcaattt tgcatacaat
    11521 ttcatcttgt ctaggatgta aaaactgagt taatctgtat gaatacgtat cttcaacttg
    11581 ctgacacata tccattattt tctctacaaa ctctctttct tccctagaaa aatgttgcaa
    11641 taagtttttg tcatttttca taactatgct aacaggagca ataattgaac caagaagcgt
    11701 gttcccatat taagcgcaat catggctgcc attacggtcc aatccaaccc cataaattgt
    11761 agattaaatc gcctaaaggg ttttaaaatc ggtgctacca gccattgaat caaacgtcca
    11821 atcgagcttg tgtataggct aggaaaccaa cttagcaaag catatgccaa taagagatag
    11881 gaataaattt ctacaatttt taatagtaaa aaaatcaaaa tttgcatagc gttaccgttt
    11941 tatatcaaag tcaaaatttg aatcagccac accagtagtc gtaccagcat tgcgcaattc
    12001 ttcaatattg actgtgacat ttactggagt taacagccac atggtatttg agaccttttt
    12061 caaatttcca gataatactg aacgagcacc atccaagtag tctaggcaac gtctagcttg
    12121 ttgctccgac atatattgaa agtcaatgag aatactcgca ttatctaata aaagatttac
    12181 catctctggt gcatcttcat aacgttttgg aaacttaata tcaattgtag ttttgacgat
    12241 ctctttttcg ttattattag tcatcaattc ttgctgcctt tcatgtaggc gttgaagttg
    12301 actttctgaa cgtgcttccc gacgcgtctc tacttttggc tgctgttcgc gcacaggtgc
    12361 agctgtagta ttggcaacac gcattttagg acgatcatta ggcattgaat aggcatctgc
    12421 ctgttcttca acttcattga cttcgtcaac ttcaaagtaa ttaaataagt tcttaaatgt
    12481 atcttttaat gccatatttt cctcctctcc attattcaaa gaatgctgag ccaattctca
    12541 catatgtagc tccgtgagca atggcgcgtt caaagtcccc actcattccc atacttaact
    12601 ctgtaaaggg catacgtggt aagttccttg tagctagttc ttcttggatt tcctgcattt
    12661 tagaaaaaat ctcgtctaat tcatcatctg tagcatcaat cggtgccatc gtcatcaatc
    12721 caacaagttc aatattctcc aataaactaa tttcagcaag tgccgcatca atctcagata
    12781 ctgcaaagcc atgcttactc tcctcaccgg aaacgttgac ttggaggaaa cacttgacta
    12841 gtttagtcgc acgtttatct atttcctgag ctagtttgac agagtctagg gcgtggaaat
    12901 aatcaacaaa tggaataatg tccttgacct ttcttctctg taaagtccct atcaaatgcc
    12961 atgtcaattg tttgtctgct agggcattat acttttctaa gaactgatcg actcgatttt
    13021 ctccaatatg tgtaatccca gtattcacta gctgattagc aatagagctg tcaacatatt
    13081 tggtgacagc tattaccttt actgattcac tcggacgacc tgccttttca gcagcttttg
    13141 ccactgctga aaagatagca tccttattct tttgaaaatt cattttagtt tagcgattac
    13201 ggaagaatgg tggtgtatcc aattcatcct catcttgatc cattgtaaat ttttcgactg
    13261 aaacagtgga tgttggttct gcgtcagttg gacgaatcaa gttttcacga cgcaaatccc
    13321 actctccgaa agcagaagct ttcggcgctt cagtttgttg tgcaactcca cgagttggtg
    13381 ctgatgctac tgaatgatca aagcgttgag aagggcgtgg tgaaacagct tccgtgcgat
    13441 ggcgggctgg tttatcagca gtatcttgac gaacacccgt agccacaaca gtcacacgaa
    13501 tctcatcttt cattgtttca tcaatagatg tacccaacca aatgttaaca ccttgacccg
    13561 cagcctgatt aacgatttct gaagcatctt ctgcttctgt cagagtcatg tcataaccac
    13621 ctgtaacatt gacaatgaca tcctctgcac catcaattgt tgtttcaaga agaggagaat
    13681 aaatcgcttt acgagccgcc tcaatcactc ggtcctcacc agtaccgata ccgataccca
    13741 tcaaggcgtt tcctttattt tccataactg tcttcacatc tgcaaagtcc aagttaatca
    13801 aaccaggatt tgtaatcaag tctgtaattc cttgaacacc ttgacgaaga acattatcag
    13861 cttcgcttag tgcttctaaa agcggtgttt tcttatcaac aatttcaaga aggttgttgt
    13921 ttgaaataat taagagtgta tctacttgtt cgcgaagacc ttcaattccc tcaatcgcaa
    13981 agtttccacg tttattacct tcaaaaccaa acggacgagt cacaactgcg acagtcaacg
    14041 cacccaagtt tttagcaata cgtgcaataa caggagccgc accagtccct gagccaccgc
    14101 ccataccagc agtgatgaag accatatctg caccagttaa tacattagtc aatgcttctt
    14161 cgctttcctc agcagcttta cgaccaacct caggttgacc tccagcaccc aaaccacgag
    14221 tcaatttagg acctagttgg ataactgttt cagctttaga gctacttagc gcttgtacat
    14281 ctgtgtttgc tgcaatgaac tcaaccccag caacaccttc ttcaatcata cggttaatcg
    14341 cgttcccgcc accaccgccg acaccgatta ctttaatgac agcaccatga ctagctgctg
    14401 cttcaaatga aaatgccata gtttaaatca ccttttcttt tctcttattc aaacatgctg
    14461 ccaaacaaac cacgaatgcg atctgtgatg tttcccttag cagctggacg aacctcttcc
    14521 tcatcatgat aagcaggaat cacttgctca tcaacatgct ccacagtgtt caattcgctc
    14581 acgatttctt tttgaattgg ttgactaatt cgaggacgag ttacagatat ttcaacaggt
    14641 ttatgtctca aaagagtttc accattcacc gcatgttggg caatattttc aacatcttcc
    14701 aactcaccaa catactccac aaagctaatc acacttgcaa atgcaggatt gcggatacca
    14761 atttgatttg gaacaaaaag tttagtgtta acaccaaaca cttcttgggc caattctgta
    14821 attcctggta agatagcacc accacctaca agaacaatgc ctcctggtaa gtctagagca
    14881 cgtgtacgct ccaaatcttg tttcacacgg tcaaaaatct gacgtaaacg tgccgcaatc
    14941 acttctgaaa ggtagcgctc agtcacttca actggtgcgt tttctccaat cacttcgaca
    15001 gtaaattttt ccttatcact tgcatcttgc ggataggcaa tgccgtagtt gtatttcaag
    15061 ttttcagcaa tactctttga agttgtcaat acttttgaaa tatcgtttgt gatgtaatct
    15121 ccaccttctt ggtagatgtt tgtgtattgc aactcttggc cacgcataac agccacagtc
    15181 gtttgaccac caccaagatc aatgacagtc gcaccaaact cacgttcacc ctcattcaat
    15241 acagagcgag ttagtgccaa cggagaaatt acaatatttt caacttggac acctgcacgc
    15301 tccaccgttt tacgaagatt gtgaagaatg gtacgtggtc ctgtgtatag cataccacgc
    15361 atttccaagc gaattcccat cattccacga gggtccttaa tgccttggaa tccatcgaca
    15421 gtgaactctt ctggaataaa tgaaattact tcgcgttccg gagtcatact ctttgtcaat
    15481 gctgatttta caacattttc aacatccaag tctgtaattt cttgtgaatc tgttgtaaca
    15541 ggaatcatcc cttgagtcgg ttcaatctga agaaggttgg caggtaatcc aacatttacc
    15601 ttttcaatgc ggatacctga cttttcttct gcctgctcga tcgctttttt aatcgctcca
    15661 gcagccacct caatatttac aataattcca tctttgacgc cagcactttt tacattgctg
    15721 accccaatca cattcatttc gttatcaata tattctgcaa ccaagacttt aacggagctt
    15781 gtaccaatat ctaatcccgt aaaaaagccg tttctagcca ttctatcagt cctctcttac
    15841 ttccaacttt aacaaatcat cttccatttt gaaaaaatag tataattagt cacccttcat
    15901 tataccatat tatatcgatt tttggtgatt ttaaaggttt tttttattac tttttcttta
    15961 caaaatcatc tatttcagct tgcatatcta taaatgccaa cttccatatc aattgtcgtt
    16021 ggaacggtca cttctgctgc tatttgtgta tagtaaggca acttttgact aatctcactc
    16081 aatggaacta aaaccgtgtt tccatccgcc atattgagtg tcagcaaatc tgcggtcact
    16141 ttgcttggcg ttaaatttat tgtctgaata gcagaacgaa ttcctgcatc tattttaccc
    16201 aattcaatgg ccagttcctt gattaattcc ttgtcggata aatttatcgt tgtgtagcct
    16261 tctggcaagg aatcctgtga aaccggctct ccaccaacct ctccactaga cagtactgga
    16321 taccactgac tttgttgctg aatgtaacct atgatagcgt attctttaat ttgaatcgta
    16381 aaggtagctg gaaactggaa cttgattgtt gctgtctcta cagacgaact attcttctta
    16441 atattctttg cgtaagcatc tgcgtgcaaa gctatggtta caatgtaatc atctggagaa
    16501 atcagactat aattttccac ctgttcagca gtcagtcgct catttccaac gacctctatt
    16561 tgttttttct tgctggttgg agaaataaaa tacagagcca acgctgccaa taacaagctc
    16621 gtcacaagaa ctggaacggc tttccacact accttggaag gaatatcagc ttttaaaggc
    16681 tggacctctt tctctgtttc tttcttggat tccagactct cttgtcttct gtttattccc
    16741 tgaaaaagga cccttttact ctttttagct tctgggatct cctgttctgt ctgcccctcg
    16801 tcaactgcct gaatatctac gtcatcttta tgagcaaggt aggcttggtg gcgtgctttc
    16861 cattgttcga aaaaggcact tttttcatca tccgtagaaa gtcctttttc ttcggctact
    16921 atagattctt tctctgctgg tgaaatttgt tctgaatcca attctacttg ggatgcctgt
    16981 tccacttcta gcactgattc ttctacattt gaatctcttt ccgtcataga acctaccttc
    17041 ccatatcttc tctaagcaaa ttgtaaaaac tatctactga ctgaatttca ttagaatttg
    17101 ccatgttttg gatataaaat tccttatgtt tcaatagctc atcgacttct actaacaggc
    17161 tggcaaatgt caattggctt tcatcaatct gcttagaata tccctttttc tctgcataga
    17221 gagcattttc aatctgatcc cctcgactgg cctgtcgtcc tagtggcaca atcaaatgga
    17281 gttgttgcat ggcaatcaac tcaaacagag tattggaacc accacgggta ataacgacat
    17341 ccgctaaatc catcaacggt tgataaagtt ctgttacata gtcaactcta tataggtttt
    17401 tatctaattg gttgagacta ctatcccctg tcaaattgat aatattgaat cgttcggtca
    17461 gagcagcact attctgactg attaaatcat taaagacctt agcaccgccc gaaccaccta
    17521 caaacagtag ggtcggtaga cttttatcga agtgactgag aatttctggc aactggattg
    17581 gtgtaacttt gtcattcgtt tgccccactt ttgtaaccgc accaacatgt tttactttag
    17641 tcaagctggc aggttgctca aaagtactat acatggttgt cgcaaattta taggctattt
    17701 tattggccag tcccattgtt aagtctgatt catggataaa gactggaacc cgcagcaaat
    17761 tagcagcaat aactggcgga accgatacaa acccaccttt tgaaaaaaga gcttgcggac
    17821 gaattttagc aataatggcc aaggattgaa gtacaccgaa accaacttta aacacgtcca
    17881 acatattttg gaaagagaaa taacggcgca atttcccagt cgaaatagaa tgaaaatgga
    17941 catctaaacc tgatttcaca acctgctcat gctcaatacc gttcccatca ccaatatagt
    18001 ggacttccca gccttcttcc aaaaatcgcg gaatcaaaag gagattgagc gtcacgtgcc
    18061 caacagtccc tccgcctgta aaaacaattt ttttcatgat tatttcaact cctcaaaggt
    18121 ctgtaagaag acgtcgccac gcacttcaaa attggcatac atatcccagc ttgcattggc
    18181 tggacttaaa aggacaatat ctcctttttc tgcaatggca aaggcttttc tagtcgcatc
    18241 cgcaatatcg agagcttcta tcgtttccac ctctgcttta tcagcagcac gttgaacacg
    18301 gggagctgat tgaccaagga ttaccatttt ctttagcccg accaaatcag ggactaattc
    18361 atcaaattca ttgccacggt ccaagccacc tgcaatcaaa atgaccttgc tattgtcaaa
    18421 gcctgaaaga gctttttgag tcgccaagat attggtagac ttactatcat tgtagaagga
    18481 aaccccattg atctcaccta caaattgcaa gcggtgtttg acacctccaa aggcagacaa
    18541 actttcctga atcgcttggt ggtctactcc caacaatttt gcaaccacaa ttgttgccaa
    18601 ggcattttca acattgtgtg aacctggaac accaatttgg tcagcatcca tgatgtattc
    18661 acccttgaaa tagagttttc cttctgccaa ataagctcca tcaaccactt cctgtgttga
    18721 aaatggaaca accgttgctt tggtctgtcc agccaattcc ttagcttctt tctggttgaa
    18781 gttgagcacc acaaaatcct cagccgtcat ctgacgctga atcatccatt tggctgctac
    18841 atagtcttca aaagtcccgt gataatcaat atgactggca atgagattgg tcacaacggc
    18901 aatatgcgga cggaaagatt ctgtccccat tagctggaaa gacgataatt ccatgaccaa
    18961 ggtatcctct gcagtcgcag tttgagcgac cgaagatgct gggtaaccaa tatttccaca
    19021 taattttgca ggtttatttc cagcattcaa gacttctgca atcatggtcg ttgtcgttgt
    19081 cttgccgttc gaacctgtta tccccacgat tggagcatct gataccaagt aggccaattc
    19141 aacctctgtc catactggaa ttcctttgcc aattgctttt tcaaccatag gattatcata
    19201 gcgaattcct ggatttttta ccatcaaagc gaaatcttca tccaataatt ccaagggatg
    19261 gctcccacaa ataacacgga taccatcttc caacaaagat tgagcagtcg gattttcttc
    19321 aaaaggcttt ccatcgttaa cagtgacgat agcacccaat ttatccagga gacgggctgc
    19381 agattcccct gatttagcta aacctagcac taacactttc ttatttttta caatatcaat
    19441 catcttcatc tcaaatacct ttactttcta acaccttatt ttacccttta cgaagacctt
    19501 tttcaagcca gaggacagaa aaaccgacgc aaagcgtcgg ttaatttcat ctatatctat
    19561 aaggaccagg ttgctctgtt ctcctctgcc tgtctttcgg ttctttatcg agataataaa
    19621 tatcccgcat cgcccaaaaa ccaatcagaa tcattagtag accaacccaa atttcctttg
    19681 aaaattgcat gattcttaaa aatccaagta ccaaggcaat cgctaatgct accagtaaaa
    19741 atactgccgc aatcaaattc atagtcccct taatattgcg aggtgcaata aaaatataaa
    19801 aaagtactaa catgatggcg aggattaaat aaaacatgct tcttctccta gaaattattc
    19861 ctcagtcgct aattttttct tcttcgcagc cttatcacgc tctgccttgt tcaagatttg
    19921 cttacgaaga cggatagatt ctggcgttac ttccatgtat tcatcatcgt tcaagaattc
    19981 tagtgattct tcaagagtca agatacgtgg tgtcttaatt acagacgttt ggtctttggt
    20041 agctgaacga acgttggtca tttgtttagc agtcgtaatg ttaacggtca agtcattttc
    20101 acgtgagttt tcaccgataa tcattccttc ataaacctca gtacctgggt taacgaagat
    20161 tgtaccacgc tcttcgatac gcatgattga gtaagtagtt gccttacctt gatcgataga
    20221 aacaagggca ccacggtgac gaccaccgat ctcaccttga acaactggca agtattggtc
    20281 gaaggtatgg ttcatgatac cgtaaccgcg tgtcatagaa aggaattctg ttgaataacc
    20341 aatcaaacca cgcgcaggca caaggaaaac aagacgagtt tgaccattac ctgtcgcaac
    20401 catatccaac atatcaccct tacgctcaga tagggattga ataacagaac cttggtattc
    20461 ttctggagta tcgatttgca cgcgctcaaa tggctccatt ttcacgccgt cgatttcctt
    20521 gatgataact tctggacgtg atacttgaag ctcatagccc tcacgacgca tagtttcaat
    20581 caagatagat aagtgcaatt caccacgacc tgaaacagtc catttatctg gagagtcagt
    20641 agggtcaaca cggagagaaa cgtccgtttg caattctgcc aaaaggcgct cttcgatttt
    20701 acgtgatgtt acccatttac cttcacgacc tgcaaacggt gagttgttca ccaagaaagt
    20761 catttgaaga gttggctcat cgatacgaag aactggaagt ggctcaaccg catcagttgg
    20821 tgttacagtt tcaccaacaa agatgtcttc cataccagaa acggcaatca agtcaccagc
    20881 ttttgcttct tggatttctt tacgctcaag accgaagaaa ccgaagagtt ttgtaactcg
    20941 gaagtttttc gttgtaccat ctagtttaga aagggtaacc tggtcaccaa ctttaacagt
    21001 accacggaag acacgaccga taccgatacg acctacgaag tcgttgtagt ccaaaaggga
    21061 tacttggaac tgcaaaggct catctgagtt atccactggt gcagggatat gctcgatgat
    21121 ggtatcgaaa attggtgcca ttgtttcttc ttggtctgct ggattatcag acaaagatga
    21181 agttccgttg atagctgatg cgtaaaccac tgggaattcc aactggtcat catctgcacc
    21241 caattcgatg aagagttcaa gcacttcatc cactacttcc tctggacgag cagatggttt
    21301 gtcaatcttg ttgacaacga cgattggtgt caagttttgt tcaagggctt ttttcaatac
    21361 gaaacgagtc tgtggcatag tcccttcgta ggcatctacg acaagcacaa caccgtcaac
    21421 cattttcatg atacgctcaa cctcaccacc aaagtccgcg tgtcctggtg tgtccatgat
    21481 gttgatacga gtaccgttat aagctacggc agtgttttta gcaaggatag tgataccacg
    21541 ctctttttcg atgtcgtttg aatccatggc acgctcatcc aactgcgtac gttcatcaag
    21601 tgtttgggat tgtttcaata attcatcaac gagggttgtt tttccgtggt caacgtgggc
    21661 aataatggca acgttacgga tgtcttctct aagtt
//
LOCUS       DBNFCX010000032        20421 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.032, whole genome shotgun sequence.
ACCESSION   DBNFCX010000032 DBNFCX010000000
VERSION     DBNFCX010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 20421)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20421)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20421
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.032"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            48..1064
                     /locus_tag="AC1PJC_001068"
     CDS             48..1064
                     /locus_tag="AC1PJC_001068"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000415108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase (FAD) complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046168 - glycerol-3-phosphate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HIP6620061.1"
                     /translation="MTKQTIAILGPGSWGTALGQVLNDNGHTVRIWGNVPEQIDEINK
                     EHTNKRYFKDVILDENIKGYKDLSEALDGVDAVLFVVPTKVTRLVAKQVAQALKHKVV
                     VMHASKGLEPDSHKRLSEVLEEEIPAELRSEIVVVSGPSHAEETIVRDLTLISAASKD
                     LETASYVQNLFSNHYFRLYTNNDVIGVETAGALKNIIAVGAGALHGLGYGDNAKAAII
                     ARGLTEITRLGVAMGANPLTYSGLSGVGDLIVTGTSVHSRNWRAGDQLGRGEKLEDVE
                     RNMGMVIEGISTTKAAYELAQELGVYMPITQAIYKVIYQGAGIEDAIKEIMTGEFRHE
                     NEWS"
     gene            1080..1982
                     /gene="galU"
                     /locus_tag="AC1PJC_001069"
     CDS             1080..1982
                     /gene="galU"
                     /locus_tag="AC1PJC_001069"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003983 - UTP:glucose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006011 - UDP-alpha-D-glucose metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HIP6620062.1"
                     /translation="MTKKVRKAVIPAAGLGTRFLPATKALAKEMLPIVDKPTIQFIVE
                     EALRSGIEDILVVTGKSKRSIEDHFDSNFELEYNLKEKGKNDLLKLVDETTGIRLHFI
                     RQSHPRGLGDAVLQAKAFVGNEPFVVMLGDDLMDITDTKAVPLTKQLMNDYEKTHAST
                     IAVMPVPHEEVSAYGVIAPQGEGVNGLYSVETFVEKPKPEDAPSDLAIIGRYLLTPEI
                     FEILENQKPGAGNEIQLTDAIDTLNKTQRVFAREFKGNRYDVGDKFGFMKTSIDYALQ
                     HPQVKDDLKQYLIDLGKKLDTKKN"
     gene            complement(2000..2677)
                     /locus_tag="AC1PJC_001070"
     CDS             complement(2000..2677)
                     /locus_tag="AC1PJC_001070"
                     /EC_number="3.4.21.-"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HIP6620063.1"
                     /translation="MKNFFDKRYPVTNGLLAIMALVFLLIQVFRFGQTTTAYTIFEFG
                     GMYGQVVRYDSTQLWRLISPIFVHIGWEHFIFNSITLLGLGYQLEGLFGSRRFFLLYL
                     LSGIMGNLFVLFFTPDVVGAGASTSLFGLFAAMALLRKFSRSPYLQVLGQRYMVLLGL
                     NLVLGLFNPTISMAGHIGGAVGGCLVVIFLPPLVEKDLFTGKQIFYSFIGYLGLIALL
                     LGIFYLR"
     gene            complement(2661..3203)
                     /locus_tag="AC1PJC_001071"
     CDS             complement(2661..3203)
                     /locus_tag="AC1PJC_001071"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030272 - 5-formyltetrahydrofolate
                     cyclo-ligase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HIP6620064.1"
                     /translation="MDKKEIRKEVLGTLQGLTSSQRARWSQQLTERLLASDTYQGSKS
                     LGTYLSMPHEFDSSYLIEQAQKDGKCIFIPKTYSQGRMDFVEYNPDDLVKTRFGVWEP
                     GTYSQPVDKSVVNWIHVPGLAWNLAGFRVGYGAGFYDRYLLDYQGKTVSTLADFQIYD
                     FEPDIFDIPVKELLIFEELF"
     gene            complement(3245..4372)
                     /locus_tag="AC1PJC_001072"
     CDS             complement(3245..4372)
                     /locus_tag="AC1PJC_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyldiaminopimelate deacetylase"
                     /protein_id="HIP6620065.1"
                     /translation="MLDLIATRRALHQIPELGMEEFKTHAFLMETIEGLLQNCTFAQV
                     RTWKTGILVYLTGSAPEKTIGWRADIDGLPIVEETGLDFKSLHPDRMHACGHDFHMTI
                     ALGLLEKMAEQQPRNNLFFLFQPAEENLAGGMLMYEAGAFGDWLPDEFYGLHVRPDLK
                     VGQMATNRATLFAGTCEVKIRFTGKGGHAAFPHTANDALVAASYFVTQVQSVVSRNVD
                     PIEGAVVTFGSMHAGTTNNVIAETAFLHGTIRALTQNMSLLVQKRVREVAEGIALSFG
                     VDLDIELNPSGYLPVENNPQLADELMTYFDGVDGVEMIDCPPAMTGEDFGYLLNKVPG
                     VMFWLGVDTPYPLHNPRLSPKEEVLPFAVDKLSDFLKMKAN"
     gene            complement(4382..5080)
                     /gene="dapD"
                     /locus_tag="AC1PJC_001073"
     CDS             complement(4382..5080)
                     /gene="dapD"
                     /locus_tag="AC1PJC_001073"
                     /EC_number="2.3.1.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017768831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047200 - tetrahydrodipicolinate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-acetyltransferase"
                     /protein_id="HIP6620066.1"
                     /translation="MTAQKMTAQEIIAFIGNAVKKTTVKVTFEGELAGPVPAEVTKLG
                     NVLFGDWKDVEPLLANLTENVDYVVEQDGRNSAVPLLDKRNINARIEPGAIIRDQVTI
                     GDNAVIMMGAVINIGAEIGPGTMIDMGAILGGRATVGKNSHIGAGAVLAGVIEPASAE
                     PVRVGDNVLVGANAVVIEGVQIGSGSVVAAGAIVTQDVPENVVVAGVPARIIKEIDAQ
                     TQQKTALEEALRTL"
     gene            complement(5237..5770)
                     /locus_tag="AC1PJC_001074"
     CDS             complement(5237..5770)
                     /locus_tag="AC1PJC_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620067.1"
                     /translation="MKKKWLLIFSALLTVTSLVACSNSKEETTSKSSSTEQTSTTKSS
                     TKESTSESSTVTLKESTVTYLADAEIDAIQTIGEYKTSLNSLMDSYVADFDGLIVQLP
                     EEAQTTLKPYREQIVTMLEQQKSALDSQFATLGDDSTVIPEEARATVLDSLKTVRDQL
                     KQTMTVVHEQAQTLLNE"
     gene            complement(6085..6813)
                     /locus_tag="AC1PJC_001075"
     CDS             complement(6085..6813)
                     /locus_tag="AC1PJC_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HIP6620068.1"
                     /translation="MKKDFFVIGDVHGKFELLLDILKKWNEERQQLIFLGDLIDRGEN
                     SKACLELVWSLVREKGAICLTGNHERMFLAWLRDPVDRYDHYRRNGGDTTINSLLGRP
                     LDAPVDGLVDANAVMEQYGDLIDFVKSCPYHLETEHYIFVHAGVDLTLPDWRKTSNHD
                     KVWLRTPFHEAENTTGKMIVFGHTPVYNLYQTKLRISQIWTSPDGKMGIDGGAVYGGV
                     LHGLVLNQQGLVRDYAVGCMESTQ"
     gene            complement(6879..8228)
                     /locus_tag="AC1PJC_001076"
     CDS             complement(6879..8228)
                     /locus_tag="AC1PJC_001076"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017648691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HIP6620069.1"
                     /translation="MTHITFDYSKVLGQFVGAQEVDYMQPQVTLADQMLRQGTGPGSD
                     FIGWLDLPENYDKEEFARIKEAAAKIQNESEVLVVIGIGGSYLGAKAAIDFLSNAFVN
                     LQTREERKAPQILYAGNSISSSYLADLVDYVADKDFSVNVISKSGTTTEPAIAFRVFK
                     ELLVKKYGQEEANKRIYATTDKAKGAVKVEADANGWETFVVPDDVGGRFSVLTAVGLL
                     PIAAAGADIDALMEGANAARTTFTSDKIAENQAYQYAAVRNILYRKGYVTEILANYEP
                     SLQYFSEWWKQLAGESEGKDQKGINPTSANFSTDLHSLGQFIQEGNRNIFETVVRVDK
                     PRKNILIPDMAEDLDGLGYLQGKDVDFVNKKATDGVLLAHTDGGVPNMFVTLPQQDEF
                     TLGYTFYFFELAIAISGYLNAINPFDQPGVEAYKKNMFALLGKPGFEELGAELNARL"
     gene            complement(8310..8852)
                     /locus_tag="AC1PJC_001077"
     CDS             complement(8310..8852)
                     /locus_tag="AC1PJC_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620070.1"
                     /translation="MFLFAFPGMGKTTLAKKYTDVVDLEMSDIKYDNSSVRHLTKEER
                     KSTKRPLKDKRYKTIYVNKAYTLHRRGKTVLVALNFLMRMLLAMSIRGGVPFHIYIPH
                     PSLKEEYRQRYISRGNNDRFIFEVMFIWYPALIPLYLLSKILPKWITVTQSGETLEDY
                     YKRENFVRFSQKLRFIQHIS"
     gene            complement(8991..9080)
                     /gene="ffs"
                     /locus_tag="AC1PJC_001078"
     ncRNA           complement(8991..9080)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="AC1PJC_001078"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:15.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            complement(9123..9644)
                     /gene="tadA"
                     /locus_tag="AC1PJC_001079"
     CDS             complement(9123..9644)
                     /gene="tadA"
                     /locus_tag="AC1PJC_001079"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008251 - tRNA-specific adenosine
                     deaminase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0002100 - tRNA wobble adenosine to inosine
                     editing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HIP6620071.1"
                     /translation="MNYTHEEKEYFMTQALQEARKSLEKDEIPIGCVIVKDGQIIGRG
                     HNAREELNQAIMHAEVMAIQEANNVEGNWRLLDSTLFVTIEPCVMCSGAIGLARIPQV
                     IYGATNKKFGAAGSLYDILTDERLNHRVKVETGILEAECANIMQDFFRQRRESQKAAK
                     LIMKTQEEATSDS"
     gene            complement(9916..11886)
                     /gene="tkt"
                     /locus_tag="AC1PJC_001080"
     CDS             complement(9916..11886)
                     /gene="tkt"
                     /locus_tag="AC1PJC_001080"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HIP6620072.1"
                     /translation="MSNLSVNAIRFLGIDAIEKSKSGHPGVVMGAAPMAYSLFTKELR
                     INPAQPNWVNRDRFILSAGHGSMLLYGLLHLSGFEDVTMDEIKNFRQWGSKTPGHPEF
                     GHTAGVDATTGPLGQGISTATGFAQAERFLAAKYNRDGFPIFDHYTYVICGDGDLMEG
                     VSAEAASYAGLQKLEKLIVLYDSNDINLDGETKDSFTEDVRARYNAYGWHTDLVTDGT
                     DVDAIFAAIEKAKVAGKPSLIEIKTVIGHGSPNKQGTNAVHGAPLGAEETEATRKALD
                     WNYGPFEIPAEVYADFKANVADRGAAAYDAWVKLVEDYKVAHPELAAEVTAILEGRDV
                     VEIKPEDFPVYENGFSQATRNSSQDALNAAAKVLPTFLGGSADLAHSNMTYIKEDGLQ
                     DSVNPLNRNIQFGVREFAMGTILNGMAAHGGLRVYGGTFFVFSDYVKAAVRLSALQGL
                     PVTYVFTHDSIAVGEDGPTHEPIEHLAGLRAMPNLNVFRPADARETQAAWYLSLTSKS
                     TPSALVLTRQNLTVEEGTDFDKVAKGAYVVYEAAGFDTILLASGSEVNLAVKAAKELE
                     AAGTKVRVVSVPSTELFDAQDAAYKEEILPNAIRRRLAIEMGATQSWYKYVGLDGKVL
                     GIDTFGASAPAQTVIDNYGFTVENVVKLVGEL"
     gene            complement(12098..13189)
                     /gene="ulaG"
                     /locus_tag="AC1PJC_001081"
     CDS             complement(12098..13189)
                     /gene="ulaG"
                     /locus_tag="AC1PJC_001081"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001863918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0035460 - L-ascorbate 6-phosphate
                     lactonase activity [Evidence IEA];
                     GO_process: GO:0019854 - L-ascorbic acid catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-ascorbate 6-phosphate lactonase"
                     /protein_id="HIP6620073.1"
                     /translation="MAKVQDITRESWILSTFPEWGTWLNEEIEEEVVPEGNFAMWWLG
                     NCGVWIKTPGGANVVMDLWSSRGKSTKKVKDMVWGHQMANMAGVRKLQPNLRVQPMVI
                     DPFAINELDYYLVSHVHSDHMDISTAAAIINNPKLDHVKFVGPVESGDIWEKWGVPAD
                     RIIRIAPGDSFEFKDIKVHAVESFDRTCLVTLPIEGYDENGGKLAGLPVTDELMARKA
                     VNYVFETPGGTIYHGADSHFSNYFAKHGRDFNIDVAINNYGDNPIGIQDKMTSIDLLR
                     MAENLRAKVIIPVHYDIWSNFMASTDEILQLWKMRKERLQYDFHPFIWEVGGKYTYPM
                     DKDRIEYHHPRGFDDCFLEDSNIQFKALL"
     gene            complement(13299..14987)
                     /locus_tag="AC1PJC_001082"
     CDS             complement(13299..14987)
                     /locus_tag="AC1PJC_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HIP6620074.1"
                     /translation="MLLDKSSCALLRYLIGLQEPETIMAISKGLQQSRRKIYYHLEKI
                     NDALPTTVESIESLPRLGIRLTEAQKLACRDLLDSIDSYTYVMSMPERIQLMLVYICI
                     TPERVTIERLMELTEVSRNTVLNDLNEIRTQLAQEQYKMTLYVSKSQGYSLVCHPLNK
                     IQYVHSLLYTIFLDANKGFLQVLEDKLFELVGCQLLFSEEMAQFLQGQVSQLEKKLGK
                     KINRYEIEFMLKVLPFLLLSYRNMELDDLEERAILKEFEQVRERIEYRVAQELKDALL
                     QTFDLKLDEIEISLIAILLLSYRKDSDVHVFSQDFIDLKRVVERFIHHFEIHSPFELE
                     NPDELAKHLLAHCKALLFRKTYGILSKNPMVQQIQDKYGTLFAMTRVSGKILEEEWQI
                     ELSDGDIAYLTIHLGGAIRRSGTRKAQTQIVYLICDEGVSVQRLLYKQCQHHLPDKKI
                     GAVFTTEQFKSVEDLLEVDFLITTSDGLETDFPLVQVHPILDFDDVLNMTHFAKYRSL
                     ADEKQVFAVELDKLLSGYIADGRTARELKQRLQKLITNELLTNLSSQDIETDLY"
     gene            complement(15112..15729)
                     /locus_tag="AC1PJC_001083"
     CDS             complement(15112..15729)
                     /locus_tag="AC1PJC_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017772020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620075.1"
                     /translation="MRKFLQDSLTETAYYLELILSAILGLALLALSTLLFADLLSSLA
                     GDIQADTFIQNFLSRAMTLAVGVEFIKMLCKQSPSTVIEVLLVAIARQLIVEHGSSSD
                     YLIGIISVAILFAVRKYLFTQFDDSNNIIMRASQKVKVANIIARVKIPSEGSETLRDF
                     VTRKLNEEEKTIAIGACVYLKNVALRIDNMHGELITRVEIIKSIY"
     gene            complement(15814..16530)
                     /locus_tag="AC1PJC_001084"
     CDS             complement(15814..16530)
                     /locus_tag="AC1PJC_001084"
                     /EC_number="5.1.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001934215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase"
                     /protein_id="HIP6620076.1"
                     /translation="MPKDLQKMRQRVYEANVALPAHGLVKFTWGNVSEVCRELGRIVI
                     KPSGVDYEKLSPENMVVTDLDGNVVEGDLNPSSDLATHVALYKAWPNVHAVVHTHSTE
                     AVGWAQAGRDIPFYGTTHADYFYGPVPCARSLTAEEVNSAYEKETGAVIIEEFERRGI
                     DPVAVPGIVVRNHGPFTWGKDPAQAVYHSVVLEEVARMNRYTEQINPRVEPAPSYIMD
                     KHYLRKHGPNAYYGQKGDEH"
     gene            complement(16530..17393)
                     /locus_tag="AC1PJC_001085"
     CDS             complement(16530..17393)
                     /locus_tag="AC1PJC_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016861 - intramolecular oxidoreductase
                     activity, interconverting aldoses and ketoses [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 3-epimerase"
                     /protein_id="HIP6620077.1"
                     /translation="MARPIGIYEKATPKHFTWKERLEFAKELGFDFVEMSVDESDARL
                     ARLEWTKEERLDLVKAIYETGVRIRTICFSGHRRYPLGSNDPALEAKSLETMKQCIEL
                     AQDLGVRVIQLAGYDVYYEEKSPETRERFIKNLRQACDWAEQAQVMLAIEIMDDPFIN
                     SIEKYLAVEKEIDSPYLFVYPDTGNVSAWHNDIYSEFYLGHRSIAALHLKDTYAVTEN
                     SKGQFRDVPFGQGCVDWENMFAVLKKTNYQGPFLIEMWSENCQTVEETRAAIKEAQDF
                     LYPLIEKAGLN"
     gene            complement(17399..18061)
                     /locus_tag="AC1PJC_001086"
     CDS             complement(17399..18061)
                     /locus_tag="AC1PJC_001086"
                     /EC_number="4.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014622185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-L-gulonate-6-phosphate decarboxylase
                     UlaD"
                     /protein_id="HIP6620078.1"
                     /translation="MKHIPNLQVALDHSDLQGAIKAAVSVGHEVDVIEAGTVCLLQVG
                     SELVEVLRSLFPDKIIVADTKCADAGGTVAKNNAVRGADWMTCICSATIPTMEAALKA
                     IKEVRGDKGEIQIELYGDWTYEQAQLWLDAGISQAIYHQSRDALLAGETWGEKDLNKV
                     KKLVDMGFRVSVTGGLDVDTLKLFEGVDVFTFIAGRGITEAADPAAAAREFKDEIRRI
                     WG"
     gene            complement(18072..18557)
                     /locus_tag="AC1PJC_001087"
     CDS             complement(18072..18557)
                     /locus_tag="AC1PJC_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HIP6620079.1"
                     /translation="MNLQKSFTENNSIRLGLTAETWQEAVHKAVEPLIESGAATEEYY
                     DAIIASTEEYGPYYVLMPGMAMPHAQAGVGVLKDSFALITLTKPVVFSDGKEVSVLLT
                     LAATDPKIHTSVAIPQIIALFELENSIERLIACQTPEEVLAMVEESKTSPYLEGLDLE
                     S"
     gene            complement(18620..18898)
                     /locus_tag="AC1PJC_001088"
     CDS             complement(18620..18898)
                     /locus_tag="AC1PJC_001088"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000241478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HIP6620080.1"
                     /translation="MVKVLTACGNGMGSSMVIKMKVENALRQLGVTDFQSASCSVGEA
                     KGLAAGYDIVVASNHLISELEGRTKGHLVGLDNLMDDNEIKTKLQAVL"
     gene            complement(18957..20405)
                     /locus_tag="AC1PJC_001089"
     CDS             complement(18957..20405)
                     /locus_tag="AC1PJC_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HIP6620081.1"
                     /translation="MDFLQTPLNWFSQNILQNPAFFVGLLVLVGYALLKKKPHDVFAG
                     FIKATVGYMILNVAAGGLVTTFRPILAALNYKFQIDAAVIDPYFGLAAANGKIAEEFP
                     DFVSAATTALLIGFGVNILLVALRKVTKVRTLFITGHIMVQQAATVSLMVLFLIPALR
                     NQFGTAAIGIICGIYWAVSSNMTVEATQRLTGGGGFAIGHQQQFAIWFVDKIAPKLGK
                     KEENLDNLKLPSFLNIFHDTVVASATLMLVFFGVILFILGPEIMANPEVITSGAPYNP
                     AKQAFFMYVIQTAFTFSVYLFILMQGVRMFVAELTNAFQGISSKLLPGSFPAVDVAAS
                     YGFGSSNAVLSGFAFGLIGQLITIVLLIVFKSPILIITGFVPVFFDNAAIAVYADKRG
                     GWKAAAILSFISGILQVALGAVCVGLLELSGGYHGNIDFEVPWLPFGFAFKYLGIAGY
                     VLVCLFLLAIPQLQFAKAKDKEAYYRGEAQAE"
BASE COUNT         5740 a         4698 c         4219 g         5764 t
ORIGIN      
        1 attatggtat aatatatcta aattacacca actagaaagg attttttatg accaaacaaa
       61 ccattgccat cttgggacct ggttcatggg gcaccgccct aggacaagtt ctcaacgaca
      121 acggtcatac tgtccgtatt tggggaaatg tccccgaaca aatcgacgaa atcaataaag
      181 aacatacaaa taagcgctat ttcaaggatg ttatcctaga tgaaaacatc aaaggatata
      241 aggatttgag tgaagccttg gacggtgttg atgctgttct tttcgttgtg ccaaccaagg
      301 taacacgcct agttgccaag caagtcgcac aagctctcaa acacaaggta gttgtcatgc
      361 acgcttcaaa aggcttagag cctgatagtc acaagcgctt gtcggaggtc ttggaagaag
      421 agattcctgc tgaactccgt tctgaaatcg tcgtggtttc aggtcctagc catgcagaag
      481 agactatcgt ccgtgatttg accttgattt ctgcagcttc aaaagacttg gaaacagcca
      541 gctacgtcca aaatcttttc agcaaccact acttccgact ttacacaaat aatgatgtca
      601 tcggtgtaga aacagcaggt gcccttaaaa atattattgc tgtcggtgcc ggcgctttac
      661 acggacttgg ttatggtgat aatgccaagg cagctattat cgctcgcggt ttgacagaaa
      721 tcacacgtct aggcgttgct atgggcgcaa atcctctgac ttacagcggt ctttctggtg
      781 ttggtgattt gattgttacc ggtacatctg tccactcccg caactggaga gctggagatc
      841 agctcggtcg cggtgaaaaa ctcgaagatg tagaacgcaa tatgggaatg gtgattgaag
      901 gtatttcaac aactaaggca gcctatgagt tggcacagga attgggcgtt tacatgccta
      961 ttactcaagc catctacaag gtcatctacc aaggtgcagg tattgaagat gccatcaaag
     1021 aaatcatgac gggtgaattc cgccatgaga atgaatggtc ttaataaaaa ggagatacaa
     1081 tgacaaaaaa agttagaaaa gccgtaatcc cagctgctgg tctgggaaca cgtttcctac
     1141 ctgctactaa ggcccttgcc aaagaaatgt taccgattgt tgataaacca actattcaat
     1201 tcatcgttga agaagctcta cgatctggta tcgaagatat tttggtggtc actggtaaat
     1261 caaaacgttc tatcgaagac cactttgatt caaactttga attggaatat aacctcaaag
     1321 aaaaaggcaa aaatgatttg ttgaaactcg ttgatgagac aacgggcatt cgactacact
     1381 tcattcgtca aagccatcca cgtggacttg gtgatgccgt tcttcaagct aaagcatttg
     1441 tcgggaacga gccatttgtt gtcatgctgg gcgatgacct catggacatc acagatacaa
     1501 aagctgtccc attgactaag caactcatga acgactatga aaaaacacat gcttcaacca
     1561 ttgctgttat gcccgttcct catgaagaag tttctgcata cggtgttatc gctccacaag
     1621 gtgaaggtgt caacggtctc tatagtgtgg aaacctttgt ggaaaaacca aaaccagaag
     1681 acgctccttc tgaccttgct attatcggac gctacttact cactcctgaa atctttgaga
     1741 ttttagaaaa ccaaaaacca ggtgccggga acgagattca attgacagat gctatcgata
     1801 cactcaataa aacacaacgc gtgtttgctc gtgaattcaa aggcaaccgt tacgatgttg
     1861 gggataagtt cggtttcatg aaaacttcta tcgactacgc cctccaacac cctcaagtaa
     1921 aagatgattt gaaacaatac ttgatcgatc ttggtaaaaa attagataca aagaaaaact
     1981 agcaagcgct agttttttct tatctcaaat aaaatatccc taatagcaag gcaatcagac
     2041 ccagataacc aatgaaactg tagaagatct gttttcctgt aaagagatcc ttttcaacaa
     2101 gaggcggaag gaaaatcacg accaagcaac ctccaacagc tcctccaata tgccctgcca
     2161 tgctgatggt tggattaaaa agtcccaaga ccaagttcaa tcccaaaagg accatgtagc
     2221 gttgaccaag aacctgtaga taagggctgc gactaaattt cctcaaaagt gccatagccg
     2281 caaaaagacc aaagagcgag gtcgatgcac ctgcaccaac tacatctggt gtaaaaaaga
     2341 gaacaaaaag attgcccatg atcccagaca agagatagag gagaaagaag cgccttgagc
     2401 caaacagtcc ttctaattga taacccaaac caagcaaggt aatgctgtta aagataaaat
     2461 gttcccaacc aatatggaca aagatagggg aaatcaagcg ccacaactga gtcgaatcat
     2521 aacgcaccac ttgaccatac ataccaccga attcaaaaat cgtataggct gtagtggtct
     2581 gcccaaatcg aaatacttgt atcaaaagaa aaacaagtgc catgatagcc aacaagccat
     2641 tggtcacagg gtaacgctta tcaaaaaagt tcttcaaaaa tcaacaactc ctttactgga
     2701 atatcaaata tatctggttc gaaatcatag atttgaaagt ctgccaaggt cgatactgtt
     2761 ttcccctgat aatctaacaa gtagcggtca taaaaccctg ccccatagcc aacccgaaac
     2821 cctgctagat tccaagccaa tccagggaca tgaatccaat taaccacaga cttatccaca
     2881 ggttgtgaat aagtcccagg ttcccaaact ccaaacctgg ttttaaccaa atcatcagga
     2941 ttatattcta caaaatccat gcgtccttgt gaataggtct taggaatgaa aatacatttt
     3001 ccatcctttt gagcctgctc aatcaggtaa gaagagtcga actcatgagg catggaaagg
     3061 taggtcccaa gcgactttga gccctgataa gtatcagaag caaggagcct ttctgttagt
     3121 tgctgactcc atcttgctcg ttgactactc gttagtcctt gcaaagtccc tagcacttct
     3181 ttccgaattt cttttttatc cacagaaact ccttttcttt cagaaaaaga ctggaaaacc
     3241 cagtctagtt tgctttcatt ttcaaaaaat cgctcaactt atccacagca aagggaagca
     3301 cttcctcttt gggactgaga cgaggattgt gaaggggata aggggtatcc acacccagcc
     3361 agaacataac acctggaacc ttgttgagca ggtagccgaa gtcctcaccc gtcatggcag
     3421 gtggacagtc aatcatctcc actccgtcaa caccatcaaa gtaggtcatc agttcatcag
     3481 ccagctgggg attgttctcc acaggcagat agccgcttgg attgagctcg atgtccagat
     3541 ccactccaaa ggacagggcg attccctctg ccacttcccg cacccgcttt tgcaccagaa
     3601 gactcatgtt ctgggtcaag gcccgaatgg tgccgtgcaa gaaggccgtt tccgcaatga
     3661 cattgttggt cgtgcccgcg tgcatggagc cgaaggtgac cacagccccc tctattgggt
     3721 cgacatttcg actaaccacc gactgaacct gggtcacaaa gtagctggct gcaaccaagg
     3781 cgtcattggc agtatgggga aatgctgcgt gcccaccctt tcctgtaaac cgtattttga
     3841 cttcacaggt cccagcaaag agggtcgcac ggttggtggc catttgaccg actttgaggt
     3901 ctggtcggac atggagccca taaaattcat ctggcaacca atccccaaaa gctcccgctt
     3961 catacataag catgccacct gctagatttt cctccgcagg ctgaaagagg aagaaaagat
     4021 tgtttctcgg ttgctgctct gccattttct ccaaaagccc caaggcaatg gtcatgtgga
     4081 aatcatgtcc gcaggcgtgc atcctgtctg ggtggaggga cttgaagtcc aggcccgtct
     4141 cctccacgat cggcaaaccg tcaatatccg cccgccagcc aatcgttttt tcaggagcag
     4201 agcccgtcag atagaccagg atgcctgtct tccaagtgcg gacttgggca aaagtacaat
     4261 tttgaagtaa accttcaatg gtttccataa gaaaggcgtg ggtcttgaac tcctccatgc
     4321 ccagctctgg aatctggtgg agggcccggc gtgtcgcgat taaatctagc atagctacct
     4381 cttagagtgt ccgcaaagcc tcttccaagg ctgttttttg ttgggtttga gcgtcgattt
     4441 ccttaatgat acgggctggc acacctgcca ccactacgtt ttcagggaca tcttgggtca
     4501 caatagcacc tgcggccaca acagaaccgc taccgatttg tacaccttcg atgacaacgg
     4561 cattagcacc gaccaaaaca ttgtcgccaa cacgtactgg ctcggcagac gctggctcga
     4621 tgacacctgc aaggactgca cctgcaccga tgtggctgtt tttaccaacg gtcgcacgtc
     4681 cgcccaaaat cgcacccatg tcaatcatag tacctggacc gatttccgca ccgatgttaa
     4741 tcaccgcgcc catcatgata acggcattat cgccaatggt cacttgatcg cggataatgg
     4801 cacctggctc gatacgggca ttgatattac gcttgtccag caaaggcaca gccgaattgc
     4861 ggccgtcttg ctccaccaca taatccacat tctcagtcaa gtttgccaag agtggctcga
     4921 cgtctttcca atcaccgaag aggacattgc caagctttgt cacctcagca ggaacaggac
     4981 cagccaattc accttcaaag gtcactttaa cagttgtctt cttcacagcg ttgccaataa
     5041 aggcaatgat ttcttgcgca gtcatttttt gtgcagtcat aatgtttcca atctaaaaat
     5101 aatattttta ctattatatc aaaattttct gaaaatttgg gaagaaatgc aaaaaaatga
     5161 aaaagaggcc ctcagttccc aatgttatta agttagctaa cttaataaca ttgggcagga
     5221 gccaaatctt tctctgttat tcatttaata atgtttgtgc ctgttcatgc acaactgtca
     5281 tcgtttgttt tagttgatca cgaactgttt ttaaactatc caaaacagta gctcgtgctt
     5341 cttctggaat cactgtcgag tcatccccta atgtcgcaaa ttgtgaatct agtgctgatt
     5401 tttgttgttc aagcatcgtt acaatttgct cacgatatgg ttttaaagta gtctgtgctt
     5461 cttctggtaa ctgaacaatt aacccatcaa agtcagcaac ataagagtcc atcaatgagt
     5521 tcaatgatgt tttatattct ccgatagtct gaatcgcatc aatttctgca tctgccagat
     5581 aagtcactgt tgactctttt aaagtaacag tcgaggattc agatgtagac tctttagtag
     5641 aggatttcgt tgtggatgtt tgttccgttg aagagctttt tgacgttgtt tcttccttac
     5701 tattagagca agccaccaaa ctagtaactg ttagaagagc tgagaaaatc agcaaccatt
     5761 tctttttcat tataaaactc cttttgttta ttactactag ataatattat ttttaagtat
     5821 gaaagtcaag tatatctaga aaacaattta tctttttaga atatacaaac agtagccctc
     5881 tcaaatgcag aatcattatg agaatcacta ggtttttata gggtatttca taccgttcct
     5941 gactaaacac tcggataaag cttgataaaa tctgccggat tgactagaaa ttttataccg
     6001 aacaaattgg catattcatc tcctaaaaat tgttaatatc cctagtatat attaccatgc
     6061 aattttgtaa atttttacag taagctactg ggtcgactcc atacagccca ctgcgtaatc
     6121 tctaaccaat ccctgttgat tcaagactag accatgcaga actccgccgt aaacagctcc
     6181 tccgtcaatc cccattttcc catctggact ggtccagatt tggctgatac ggagctttgt
     6241 ttgatagagg ttatacacag gtgtatgtcc aaagacaatc atttttcctg tggtattttc
     6301 agcctcatgg aaaggggtgc gtaaccaaac cttatcatga ttactagttt ttcgccaatc
     6361 tggcaaagtc aagtccacac cagcatggac aaaaatatag tgttcggttt ccagatgata
     6421 gggacaagat ttgacaaaat caatcaggtc tccatattgt tccatcactg cattggcatc
     6481 cactaggcca tctaccggtg cgtccaaggg acgaccgagt aaggaattaa tggtcgtatc
     6541 tccaccattt ctccgatagt ggtcgtagcg gtcaaccgga tcacgcaacc atgccagaaa
     6601 catccgttca tgattgcccg ttaaacaaat cgcacccttt tcccgcacca agctccagac
     6661 caactccaaa caagcctttg aattttctcc acgatcaatc aaatccccaa gaaaaatcag
     6721 ctgttgtcgc tcttcattcc atttcttcaa aatatcgagt agcagttcaa actttccatg
     6781 gacatcaccg attacaaaaa aatctttttt catagactct attctaccat atttaataag
     6841 caaagaaaaa ctgaccgttt ccgatcagtt tggttttatt acaaacgtgc gttcaattct
     6901 gcaccgagtt cttcaaatcc tggttttcca agaagagcga acatgttttt cttgtaggct
     6961 tctacacctg gttggtcaaa tgggttaatc gcattgaggt aaccagagat agcaatcgcc
     7021 aactcgaaga agtagaaggt gtaaccaagt gtgaactcat cttgttgtgg aagggtcaca
     7081 aacatgtttg gtacgccacc gtctgtgtga gcaagaagta cgccgtccgt tgcttttttg
     7141 tttacaaagt caacgtcctt accttgcaag tagccaagac cgtcaaggtc ttctgccatg
     7201 tcaggaatca agatattttt tcttggtttg tcaacacgaa ccactgtctc aaagatattg
     7261 cggtttcctt cttggataaa ttgtccaagt gagtgcaagt ctgttgagaa gttagcagat
     7321 gttgggttga tacctttttg gtccttacct tctgactcgc ctgccaattg tttccaccac
     7381 tcgctgaagt attgaagtga tggctcatag ttagccaaga tttctgttac atagcctttt
     7441 ctgtaaagga tgttacggac agctgcatat tggtatgctt ggttttcagc aatcttatca
     7501 gatgtaaatg tcgtgcgggc tgcgtttgca ccttccataa gggcatcaat gtctgcacca
     7561 gctgccgcga ttggcaatag accaactgca gtcaagactg agaaacggcc gccgacatca
     7621 tctggaacaa caaaggtttc ccaaccgttt gcatccgctt caaccttaac agcacctttt
     7681 gccttatcag ttgtcgcata gatacgcttg ttagcttctt cttgaccgta tttcttcaca
     7741 agcaattctt tgaagacgcg gaaagcaatc gcaggctcag ttgttgtacc tgatttagaa
     7801 atcacgttaa ctgagaaatc cttgtcagca acataatcca ccaagtcagc aagatagctt
     7861 gatgagatag agtttccagc gtaaaggatt tgtggagctt tgcgctcttc acgtgtttgc
     7921 aagtttacaa aagcattgct caagaaatca atagctgctt tagcaccaag gtaagaacca
     7981 ccgataccga taactaccaa aacttcactt tcattttgga ttttagctgc tgcttccttg
     8041 atacgagcaa actcttcttt gtcgtagttt tctggcaaat ccaaccagcc gataaagtcg
     8101 ctaccaggac ctgttccttg acggagcatt tggtctgcaa gggtaacttg tggttgcatg
     8161 tagtctactt cttgagctcc aacgaattgc cccaagactt ttgaatagtc aaatgtaata
     8221 tgtgtcatct ttttcctcca tttgtgtacc ataatatgat aacgctttat catatttttt
     8281 tcaagaaatt tatcaatttt catttatttt catgaaatat gttgtataaa tcttaatttt
     8341 tgtgaaaatc taacgaaatt ttcgcgtttg taataatcct ccaaagtctc tcccgactgg
     8401 gttactgtaa tccatttcgg gagaatctta gatagtaggt aaagcggaat gagggcagga
     8461 taccaaatga acatgacttc aaagatgaac cggtcgttgt tgcctcttga aatgtaacgt
     8521 tggcggtatt cttctttgag agaagggtgg ggaatataga tatgaaatgg cacaccaccg
     8581 cgtatagaca tggccagcaa cattctcatc agaaaattca gcgctactag gactgttttc
     8641 cctcgtctat gaagagtgta ggccttattg acatagattg ttttatagcg tttatccttc
     8701 agtgggcgtt tggtggattt tcgctcctct ttcgttaaat gacgaacact gctattatcg
     8761 tacttaatgt cagacatttc taagtccaca acatctgtat atttcttagc aagtgtcgtt
     8821 tttcccatac ctggaaaggc aaataaaaac ataggctttc ctccttattc ctcagtagaa
     8881 tagcagagca tccaaaaagt tttcttaagt tacccctatt ttgcccctca tttctaaaaa
     8941 taagcaaaag aaaaccctct gaaatcctga tttcaaaggt tttttagatt atatgcaaaa
     9001 agagcacaca ctcgacctcg cttagggctg ctggattcct cccctgaccc gcttcacgca
     9061 cgaatgttgc tccgtttaat attataacac aatttggcca gagtgcaagt ttggaatatt
     9121 aactagctat ccgaagttgc ttcctcttgc gtcttcatga taagtttagc agccttctga
     9181 ctttctctgc gttgtctgaa aaaatcttgc atgatattgg cacattccgc ttctaaaata
     9241 cctgtttcta ccttgacacg atggttgagc cgctcatctg tcagaatgtc atagaggcta
     9301 cctgcagctc caaacttttt gttggttgct ccatagatga cctgcggaat gcgtgctagg
     9361 ccaatagctc cgctacacat cacacaaggt tcaatcgtca caaaaagggt cgaatcaagc
     9421 aagcgccaat tcccctcaac attgttagcc tcttggattg ccataacctc agcgtgcatg
     9481 attgcctgat tgagttcctc acgcgcatta tgccctctgc caataatctg gccatccttg
     9541 acaatcacac aaccaattgg aatttcatcc ttttctagcg actttctagc ttcttgcaat
     9601 gcttgagtca taaaatactc tttttcttca tgtgtatagt tcataaatct attatagcac
     9661 agccctgata acagttcaaa atcacttctt tattctctgc tatcaaaatc aatctaacac
     9721 tacttcttcc ttatcacaca tttctttcaa aattctgccc ttctattaac ttaaaaatac
     9781 ctcctcagtc gagaaggtag ggggagcaat attgattttt acatatatta atatatcatt
     9841 tattgtcgat attgtcaaga aaatttttaa aaaaattcaa aaacagcctc gaaaggctgt
     9901 atctgacatt ttctattaca attcgccaac taatttcaca acattttcta ctgtgaagcc
     9961 gtagttgtca ataactgttt gggctggagc tgaggcaccg aatgtgtcga taccaaggac
    10021 tttaccgtcc agaccgacat acttgtacca actttgagtt gcacccattt cgatagccaa
    10081 acgacgacgg atagcatttg gaaggatttc ttccttgtaa gctgcgtctt gtgcatcgaa
    10141 gagttcagtt gatggcacag aaaccacacg aaccttagta cctgctgctt ctagttcttt
    10201 ggcagcttta acagccaagt tcacttctga accagatgca agaaggattg tatcaaagcc
    10261 tgctgcttca tagacaacat aagccccttt ggcaaccttg tcaaagtcag tgccttcttc
    10321 aactgtcaag ttttgacgag tgagaacaag ggctgatggt gtagacttgc tagtcaatga
    10381 caagtaccaa gctgcctgtg tttcacgcgc atctgctggg cggaagacat tgaggtttgg
    10441 catagcacga agtcctgcca agtgctcaat cggctcgtga gttggtccat cttcaccaac
    10501 tgcgatagag tcgtgtgtga agacgtaagt cacaggaagt ccttgaaggg ctgacaaacg
    10561 aacagctgcc ttcacatagt ctgagaagac gaagaaggta ccaccataga cacgaagtcc
    10621 gccgtgggct gccataccat tcaagatagt tcccatggca aattcacgca caccgaactg
    10681 aatattgcgg ttgagtggat ttactgaatc ttgcaaacca tcttccttga tgtaggtcat
    10741 gtttgagtga gccaagtcag ctgaaccacc taagaaagtt ggcaatactt tagccgctgc
    10801 gttgagggca tcttgtgatg agttacgagt tgcttgtgag aagccatttt cgtaaaccgg
    10861 gaagtcttct ggcttgattt caactacgtc acgaccttcc aagatagctg ttacttcagc
    10921 tgctaattct ggatgagcta ctttgtagtc ttcaactaat ttcacccaag catcgtaggc
    10981 tgctgcaccg cgatcagcta cattagcttt gaaatccgca tagacttcag ctggaatttc
    11041 aaatggacca tagttccaat caagcgcctt acgagttgct tctgtttctt ctgcaccaag
    11101 tggagcaccg tgaacggcat ttgtaccttg tttgtttggc gaaccatgac cgataacagt
    11161 cttgatttcg ataagagatg gcttaccagc tacttttgcc ttttcaatag cagcaaagat
    11221 ggcatctaca tctgtaccgt ctgttacgag gtctgtatgc cagccataag cattgtaacg
    11281 ggcacgtaca tcttctgtga aggagtcttt tgtttcgcca tccaagttga tgtcatttga
    11341 atcgtaaaga acgatgagtt tttctaattt ttgaagacct gcgtaagaag ccgcttctgc
    11401 tgaaacaccc tccatcaagt cgccatcacc acagattacg taggtatagt ggtcaaagat
    11461 tgggaaacca tcgcggttgt acttagctgc aaggaaacgc tctgcttgtg caaaacctgt
    11521 cgcagttgag ataccttgtc caagtggacc tgttgttgca tctacacctg ctgtgtgacc
    11581 aaattctggg tgacctggtg tttttgaacc ccattgacgg aagttcttga tttcatccat
    11641 agtgacatct tcaaatcctg acaaatgaag aagtccgtag aggagcattg acccatgacc
    11701 tgctgataag ataaagcggt cacggttcac ccagtttggc tgagctgggt tgatacgaag
    11761 ttctttagta aaaaggctgt aggccattgg agccgcaccc atgacgacac ctgggtgacc
    11821 tgattttgat ttttcgatgg catcaatacc aaggaaacga atcgcattga ctgaaagatt
    11881 tgacatgttt ttctcctttt ttaaagtcat gaatttatta taccataaag cgttttctat
    11941 gtctgtttga aatgaagcga gaaataaatt gtccgtagaa aagaggcagg actttcgtcc
    12001 cgcccttgga gtgaacagta gtaattcgca catttcatac tttatcagag tttatagtgc
    12061 ctctcctcgt ctctatgggg caagagagtt ctaaatctta taacaaagcc ttaaattgaa
    12121 tatttgagtc ttctaagaag caatcatcaa agccacgtgg gtggtgatat tcgatacggt
    12181 ccttgtccat cggataagta tacttgccac caacttccca gatgaatgga tggaaatcgt
    12241 attgcaagcg ttccttacgc attttccaga gctgcaagat ttcatctgtt gacgccatga
    12301 agttagacca gatgtcatag tgaacaggga tgattacctt agcacgcaag ttttctgcca
    12361 tacggagaag gtcgattgag gtcatcttgt cttggatacc gattgggttg tcaccgtagt
    12421 tgttgatagc aacgtcgatg ttgaagtcac gaccgtgttt tgcaaagtag tttgagaagt
    12481 gggagtctgc accgtggtag atggttccgc caggtgtttc aaagacatag ttgactgcct
    12541 tgcgagccat gagttcatct gtcacaggaa gtcctgctaa tttaccacca ttttcgtcat
    12601 aaccttcgat tggcaaggtc accaagcaag tacggtcgaa ggattctact gcgtggacct
    12661 tgatgtcttt gaactcaaag ctatcacctg gtgcgatacg gatgatacgg tcggctggaa
    12721 cgccccattt ttcccagatg tcgccacttt caactggacc gacaaatttg acatggtcca
    12781 actttggatt gttgatgatg gcagcggctg tgctgatgtc catgtggtca ctgtggacgt
    12841 gcgatactag gtagtagtcc aattcattga tggcaaatgg gtcgataacc attggctgca
    12901 cacgcaagtt tggttgcaat ttgcgcacac cggccatgtt agccatttgg tgtccccaaa
    12961 ccatatcttt cactttttta gtggatttcc cacgtgatga ccagaggtcc atgaccacgt
    13021 tagctccacc tggtgtttta atccagacac cacagtttcc aagccaccac atagcaaagt
    13081 tgccttctgg cactacttct tcttcaattt cttcattgag ccaagttccc cattctggga
    13141 aggttgaaag aatccaggat tctcttgtaa tatcttgaac tttagccatt ttccattcct
    13201 cctataaggt acgtttctat gcttctagta tatgctccaa aggcaacaaa aaaaagacca
    13261 aataaaacac aggcttgtgt tcaaacttgg actttaccct aatacagatc tgtttcaata
    13321 tcttgactgg ataaattggt taataattca ttggtaatca gtttttgtag ccgttgtttg
    13381 agttctcgag cggtccttcc gtctgcgata tatcccgata gaagcttgtc tagttctact
    13441 gcaaaaactt gtttttcatc tgccaaacta cgatattttg caaaatgagt catgtttagc
    13501 acatcatcaa aatctaaaat ggggtgaacc tgcaccaaag ggaaatccgt ttccaaccca
    13561 tcgctggttg taatcaagaa atcaacctct agtaagtctt cgacactctt gaattgttca
    13621 gtggtaaaga cggcgccaat cttcttatct ggcaaatgat gctggcattg tttataaagt
    13681 aagcgttgga ctgacacccc ttcatcacag attaaataga caatctgtgt ctgtgcctta
    13741 cgcgtcccac tgcgtcgaat agcccctcct agatgaatcg tcaaataggc aatatctcca
    13801 tcggataact caatctgcca ctcctcctcc aaaatctttc cagaaacccg tgtcatagca
    13861 aacagggtgc cgtatttatc ttggatttgt tggaccattg gatttttaga taggatgccg
    13921 taggtttttc tgaacaacag agccttgcaa tgtgccaaga gatgtttggc taattcgtca
    13981 ggattttcca attcaaatgg tgaatgtatc tcaaaatgat gaataaatcg ctctaccaca
    14041 cgcttcaagt caatgaaatc ttgactgaat acatgaacat cgctatcttt tcgataggat
    14101 agaagtaaaa tggcaatcag ggagatttct atttcatcca atttcaaatc aaaggtttgc
    14161 aacaaggcat ctttcaattc ctgagcaact cgatactcga tacgctctcg aacttgttca
    14221 aattctttga gaatggctcg ttcttccaag tcatccagct ccatattgcg atagctaagg
    14281 agcaagaaag gcaatacttt gagcataaac tcgatttcgt agcgattgat tttcttgccc
    14341 agtttctttt ctagctgcga tacttgtccc tgtaaaaatt gtgccatttc ttctgagaag
    14401 agcaactgac accccaccaa ctcaaataac ttatcttcta gaacctgcaa aaaaccttta
    14461 ttggcgtcta agaagatagt atagagaagc gagtggacat attggatttt atttaaagga
    14521 tgacaaacga gactatagcc ctgactctta gacacataga gggtcatctt gtattgttct
    14581 tgagccaact gggttcgaat ttcattcaaa tcatttaaga ccgtattacg agagacttct
    14641 gtcaactcca ttagccgttc aatggtcact ctttctggtg tgatacagat atataccaac
    14701 atcagctgaa tgcgctcagg catgctcatg acgtaggtgt acgaatcaat ggaatcgaga
    14761 agatctcgac aggctagttt ttgcgcttcg gtaagtcgaa taccgaggcg aggtaagctt
    14821 tcaatactct ctacagttgt tggtagggca tcattgattt tttctagatg gtaatagatt
    14881 tttcgacgtg attgttgcaa gcccttggaa atagccatga ttgtctcagg ttcctgtaga
    14941 ccaatcaggt acctcagtag agcgcaacta ctcttatcta ataacaagat tctcctcctc
    15001 tttcccccgt cccgttacta tcttaacata attatctggg atattctaat aattattaaa
    15061 attcatctga ttattacttg ttttacattg cataaatatt tgtagttaga attaatagat
    15121 gcttttaata atttctaccc gggtaatcag ttctccgtgc atgttatcta tccgaagggc
    15181 aacatttttc aaatatacac aggcaccaat agcaatggtt ttctcttctt cattgagttt
    15241 tcgtgtcaca aaatctctca aagtctcact accttcactt ggaattttta ctcgtgcgat
    15301 gatattagcc acttttactt tctggctggc acgcatgata atattattgg aatcatcaaa
    15361 ctgagtgaag aggtattttc gcactgcaaa taggatggca accgaaataa ttccaatcaa
    15421 gtaatcacta ctagaaccat gctctacgat cagttggcga gcaatggcaa ccaggaggac
    15481 ctcaatcacg gtgctaggtg actgtttgca aagcattttg ataaattcga ctccgaccgc
    15541 caaggtcatt gcacgactca gaaaattttg aataaacgta tccgcttgaa tatcaccagc
    15601 taatgagctg agcaggtctg caaaaaggag cgttgacaag gctaaaaggg ctaagccaag
    15661 tatggcagat aaaatcaatt ctaaatagta ggctgtctct gtcagactat cctgtaaaaa
    15721 tttcctcatc tttctcctca tcaaaaggga aaaagcagtt ctcctttttg gggagtctgc
    15781 tacttttccc tactgtttct ttcacacaag aacttaatgt tcatcaccct tttgtccata
    15841 gtaggcattg ggaccatgtt tacggaggta gtgcttgtcc atgatatagc ttggcgctgg
    15901 ctccacccgt ggattgattt gttcggtgta gcggttcatc cgagccactt cctcaaggac
    15961 aacactatgg taaactgcct gagcaggatc cttgccccaa gtgaacggac cgtgattgcg
    16021 aacaacaatt cctggaactg caactggatc aatgcctcgg cgctcaaatt cctcgatgat
    16081 gactgctcct gtttcttttt cataggccga gtttacttcc tcagctgtca aagaacgggc
    16141 acatggtact ggaccataga aatagtccgc atgggttgtc ccataaaatg gaatgtcgcg
    16201 accagcctga gcccaaccca ctgcttctgt cgaatgggta tgcacgacag catgtacgtt
    16261 tggccaagcc ttgtagaggg caacgtgggt cgccaaatca gacgaaggat tcaggtcacc
    16321 ttctaccaca tttccgtcca agtccgtaac gaccatattt tctggtgaca atttttcata
    16381 gtccacacca gagggcttga tgacgatgcg accaagttca cggcagactt ctgatacgtt
    16441 gccccaggta aacttgacaa gtccgtgagc aggcagggcg acgttggctt catagacccg
    16501 ctgacgcatt ttctgtagat cttttggcat tagttcaacc ccgctttctc aatcaatgga
    16561 tagaggaaat cttgtgcttc cttgatagct gctcgtgttt cctcaactgt ttggcagttt
    16621 tcagaccaca tctcgatcaa gaatggacct tggtagttgg tctttttcaa gactgcaaac
    16681 atattttccc agtccacaca gccctgaccg aatgggacat cacggaattg acctttggaa
    16741 ttttcagtta ccgcataggt atccttgagg tgaagggctg cgatggagcg gtgtcccaga
    16801 taaaattcgc tgtaaatgtc attgtgccaa gcagacacgt ttcccgtatc tgggtagaca
    16861 aagagataag gcgagtcgat ttctttttca acggctaggt atttttcaat ggagttgata
    16921 aatggatcat ccataatctc aatagccaac atgacctgag cctgttctgc ccagtcgcaa
    16981 gcctgacgga gattcttgat gaaacgctct ctggtttcag gtgatttttc ctcgtagtaa
    17041 acgtcgtagc cagccaactg gatgacacga acgcccaaat cctgagccag ttcgatacac
    17101 tgtttcatgg tttctaagga cttggcttca agagcagggt cattggagcc aagtgggtag
    17161 cgacggtgac ctgagaaaca aatggtccga atacggacac ctgtttcata gatagctttg
    17221 accaagtcca aacgctcttc cttggtccat tccaaacgag ccaagcgagc atcgctctca
    17281 tccaccgaca tttccacaaa gtcgaaacct aattctttgg caaactccaa gcgttccttc
    17341 catgtgaaat gcttgggcgt tgccttttca tatattccga ttggtcgtgc cataggcctt
    17401 acccccagat acgacggatt tcgtctttga attcacgcgc cgctgctgct ggatcggctg
    17461 cttctgtgat accgcgacct gcgataaagg tgaagacatc tacaccctcg aagagtttaa
    17521 gggtatccac atcaagacca cctgttacag acacacggaa gcccatgtca accaattttt
    17581 tcactttatt gaggtctttt tcgccccaag tttcgccagc aagaagggcg tcacgagatt
    17641 ggtggtaaat cgcttgggaa atacctgcgt ccaaccagag ttgagcctgt tcataagtcc
    17701 aatcaccata gagttcgatt tggatttcac ccttgtcgcc acgcacttcc ttgatggcct
    17761 tcaaagccgc ttccatggtt ggaatagttg cagaacaaat acaagtcatc cagtccgcac
    17821 cacgaacagc attgttttta gccacagtac cacccgcatc cgcacacttg gtatctgcaa
    17881 cgataatttt gtctgggaaa aggctacgta gcacttctac caattcgcta ccaacttgga
    17941 gcaaacaaac ggtacctgcc tcgatgacat ccacttcatg accaacggag acagctgctt
    18001 taatcgctcc ctgcaagtct gaatggtcaa gggcaacttg taaatttgga atatgtttca
    18061 tgttttttct cctaactttc taaatctaaa ccttctaggt aaggactggt tttggactct
    18121 tccaccattg ccaagacttc ctcaggagtt tgacaagcaa tcaaacgctc gattgaattt
    18181 tccaattcaa agagggcaat gatttgtgga atagctacgg atgtatgaat ctttggatcg
    18241 gtagctgcaa gagtgagcag aacagacact tctttcccat ctgagaagac gactggtttt
    18301 gtcaaggtaa tcaaagcaaa ggaatccttc aagacgccga cacctgcttg ggcgtgaggc
    18361 atagccatac caggcatgag cacatagtag ggaccatatt cttcggtcga agcaatgatg
    18421 gcatcatagt attcttctgt cgcagcgcca ctttcaatca gcggttcaac agccttgtga
    18481 acagcctcct gccaggtttc cgctgtcaat cccaagcgaa tggaattatt ttctgtaaat
    18541 gatttttgta aattcatagt ttttcccttc tacacgctat atgaaagggg gagggaaact
    18601 ccctacccct aacggctatt tatagcactg cttgtaattt tgttttgatt tcgttgtcgt
    18661 ccatgaggtt gtcaagacca accaaatgac ctttcgtgcg accttccaac tcagaaatca
    18721 agtggttaga ggctacgaca atatcatatc ctgccgctaa accttttgct tcaccgactg
    18781 agcaagaagc tgattgaaaa tctgttacgc cgagttgacg aagggcgttt tctaccttca
    18841 tcttgatgac catagatgag cccatgccgt ttccgcaggc tgttaaaact ttaaccataa
    18901 tttcactcct attttatttt taatacatta tgttctgatt ttacagacca aggatactat
    18961 tctgcttgtg cctcgccacg atagtacgct tccttatctt ttgctttcgc aaattgaagt
    19021 tgcggaatag ccaataagaa gaggcagaca agaacataac cagcaatacc gaggtactta
    19081 aatgcaaatc caaatggcaa ccatggcact tcaaagtcaa tgtttccgtg gtaaccaccg
    19141 ctcaattcaa gcaaaccaac gcagactgca ccaagagcaa cttgaaggat acctgagatg
    19201 aaggaaagga tagctgccgc tttccaacca ccacgtttgt cagcgtacac tgcgatagct
    19261 gcgttatcga agaatacagg tacgaaacca gtgatgatga ggattggact cttgaagaca
    19321 atcaagagaa cgattgtaat caactgaccg attaaaccga aggcaaaacc tgaaaggact
    19381 gcgttagatg aaccgaagcc gtaagaagct gcaacgtcca ccgctgggaa tgaaccagga
    19441 agcaatttgc ttgagatacc ttggaaggca tttgtcaatt ctgctacgaa catgcggaca
    19501 ccttgcatca aaatgaagag atatactgag aaggtgaagg ctgtttgaat cacatacata
    19561 aagaaggctt gtttagctgg gttgtatgga gcacctgaag tgataacttc tggatttgcc
    19621 atgatttctg gacccaagat gaacaaaatc acaccgaaga acacaagcat caatgtcgct
    19681 gaagcaacaa ctgtatcgtg gaagatgttg aggaagctag gtagcttcaa gttatccaag
    19741 ttttcttctt ttttaccaag ttttggtgca atcttatcga caaaccagat cgcgaattgt
    19801 tgttggtgac cgatggcaaa tccaccgccg cctgtcaatc gttgcgttgc ttcaactgtc
    19861 atatttgagc tgacagccca gtagatacca cagatgatac cgatcgctgc tgtaccgaat
    19921 tggttacgaa gagccgggat gaggaagagc accatcaatg agactgttgc cgcttgttgt
    19981 accatgatgt gtccagtgat gaacagagta cgtacttttg taaccttacg tagtgccacc
    20041 aagaggatgt tgacaccgaa accaatcaag agagctgtag tggctgctga tacgaaatca
    20101 gggaactcct cagcaatttt cccatttgct gctgcaagac caaagtaagg gtcaataact
    20161 gccgcatcaa tttggaactt atagttcaag gccgccaaaa tcggacggaa ggttgttacc
    20221 aaaccaccag ctgctacgtt caaaatcata tagccgactg tcgctttgat aaaccctgca
    20281 aaaacatcat gaggcttttt ctttaagagg gcatagccca ccaatactaa aagacctacg
    20341 aagaaggctg gattctgcag gatattctgt gagaaccagt ttaatggggt ttgaaggaaa
    20401 tccatttttc attctccttt t
//
LOCUS       DBNFCX010000033        19870 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.033, whole genome shotgun sequence.
ACCESSION   DBNFCX010000033 DBNFCX010000000
VERSION     DBNFCX010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 19870)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19870)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19870
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.033"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            20..1378
                     /locus_tag="AC1PJC_001090"
     CDS             20..1378
                     /locus_tag="AC1PJC_001090"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008706 - 6-phospho-beta-glucosidase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HIP6620082.1"
                     /translation="MKTLKLVTIGGGSSYTPELVEGMILRAHQLPIREWWFVDVEQGA
                     KKQEIVVELARRMVEKAGLDWKIESTLDRREALIEADFVTSQFRVGQLPARYLDETIP
                     LSYGMLGQETNGAGGIFKAFRTIEAYKGIIKDMKDLCPNAWLINFTNPAGIVTEAIAN
                     ELHWKKVIGLCNIPIGQKKLAARILGQSEGDLSTRHIGLNHFHFHEVWDKYGENRTQV
                     VLETLYGDLREETPEAVKNITNLEFPIQLLRTIGMLPCDYHRYYFLEQEMLEDALEQY
                     RQGNVRAKVVQEVETELFELYKDPQLKDKPKQLELRGGAYYSDVACQIICAIHNDSRE
                     ELTVSTVNRGVIPYLPENCVVEVTSIISAQGATPLACPPTPPIVTGYLQLMKQMELVT
                     VQAAMTGDYSLALQAFTLNPLISNGSQAEALLQDMLLAHENYLPQFAPVIQHIKERRN
                     NQ"
     gene            1375..2775
                     /locus_tag="AC1PJC_001091"
     CDS             1375..2775
                     /locus_tag="AC1PJC_001091"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HIP6620083.1"
                     /translation="MTKDKVFYQFPTNFLWGSSTSGPQSEGIEPGDGKGQNNWDYWYS
                     IEPERFHNKIGPSQTSTFYKHYEKDIDLLVETGHTVFRTSIQWSRLIPTGTGEINQEA
                     VSFYRSVFSLVRAKGIQLFVNLYHFDLPYCLQEKGGWENKEIVRAYEVYARTCFELFD
                     DLVDRWITFNEPIVPVECGYLGIYHYPCKVDAKSAVAVAYHTQLASSLAVKACHEVNP
                     HKKIAIVLNLTPAYPRSEQAEDIKAARIAELFQTKSFLDPSVLGEYPDELVELIDAYG
                     LMPEVSDEELAIIKENRVDFLGVNYYQPLRVQAPTNSWKEGEPLTPEHFFAPYDMPGK
                     KMNPHRGWEIYEKGIYDIAINIKENYHNIEWFVTENGMGVEGESAFKDNGLIQDDYRI
                     EFIEDHLIELHRAIQEGANCKGYMLWTFIDCWSWLNAYKNRYGLVELDLDTQERIVKK
                     SGKWFKKLSDANGFHR"
     gene            2785..3891
                     /locus_tag="AC1PJC_001092"
     CDS             2785..3891
                     /locus_tag="AC1PJC_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF871 domain-containing protein"
                     /protein_id="HIP6620084.1"
                     /translation="MVELGFSIYPENYSLEESQAYIKLLHQYGARRLFMSLLQLENGD
                     RTVFELYQKLVDYANQLGMTVIADISPDFIAAQGWDGALMERAAELGLAGIRLDEALL
                     LEEIIEMTHNPHNIKVELNLSTDKTLLSNLLASVANRDNIIACHNFYPHAFTGLSEEH
                     FLEMSSFYHQSGIRTAAFVSAQTASEGPWPLSEGLPTLEDHRFWHLPLQIAWMKATGF
                     IDSILISNQFISEEELQSIQTVLNEDTISLMVDIEEGLTPVEREIVAFNHVYRGDISA
                     YVLRSTMPRVVYKDASVPARSDQAIPVGRGDILIDNDLYGRYKGELQIALKEFTISPK
                     VNKVGRISPDYLPLLRFIKPWQDFKLVIASEHFH"
     gene            3983..5977
                     /locus_tag="AC1PJC_001093"
     CDS             3983..5977
                     /locus_tag="AC1PJC_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HIP6620085.1"
                     /translation="MLSKKEVRLLEALLAKQETFVPSIELAKVLSVSDRTVRTYIHQL
                     TSSLENSGAHILSKQGSGYCLQIERPVEFEMFWQEQLLLKKRLTDLTQLEEAGDRQRY
                     ILNKLLFEDPIQSPDCLQRELFIGKTTLHSILADIRKLFIPYQLELLVTRKGIELKGD
                     EPAIRHFIMDYFFDEGNVQSVYGVVETNLLPDIRFTDLMLIVLDECRDAKLRLSDFVM
                     QNLVLHIALLLQRLKIGSGLDRFPIPERIQSSQEYLVAQRIIDRIEETFQVTIPSEEA
                     NYIALHLKVKLTGNPNQDGEVEEIFRQNVENSLLHLSHLTGLELSKDQQLFKGVLAHL
                     MPLRIRLENNIQLGNPLTAEIKDQYFEAFELTKTAFAAIPELMGYSISDDEWAYLTLH
                     VMAAIERYQGFKKTRVLVVCATGIGSALMLKNRLEKEFSSSLEILDTVSYYEVTEERL
                     KDVDLIISSISLSNLIFMTPVINVSVFLSEKDIEAIRSHLQQTTPVIPDQGENVLMEV
                     GQAKQIAEAVFAPHRIIYLEEDCDREVALKQLVTTLNESIEPDFVNRFIEQVNLRESY
                     SPVVFGDRLAFPHPALPMSYSEQIVVGIYKNAVDWGHGKQVQFVFLLSPSKGRNAFLK
                     YISPCLVDFVQDRVLQERLLHHPNYKELIDIFIPLIQRKG"
     gene            5990..6301
                     /locus_tag="AC1PJC_001094"
     CDS             5990..6301
                     /locus_tag="AC1PJC_001094"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HIP6620086.1"
                     /translation="MKHIMLVCNAGMSTSMLVTKMQKAAEETGVEATIWAVPVSEADT
                     EVAQKEIDVLLLGPQVKFLLNDYKAKFEPTIKVDAINMMDYGVMNGAKVLEAALKMME
                     G"
     gene            6303..6617
                     /locus_tag="AC1PJC_001095"
     CDS             6303..6617
                     /locus_tag="AC1PJC_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HIP6620087.1"
                     /translation="MNSPEYLEAIMGLIMYGGEAKGFASQAIRAAKEGRIDEAEQLLQ
                     DATASLNIAHKSQTQLLAKEASGESVELSLLMVHGQDHLMNALTFIDLAKEFVDLYKQ
                     IG"
     gene            6636..7076
                     /locus_tag="AC1PJC_001096"
     CDS             6636..7076
                     /locus_tag="AC1PJC_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3284 domain-containing protein"
                     /protein_id="HIP6620088.1"
                     /translation="MKISKIGQVPIERLFATIRQSLKDDFQQNTGSTLQDQDITQGLT
                     YTKTFGDKGQHSVKVTVEEFTAPYCYAVCFHSNRGKEHVRYQLEDLGNAQTNIEYSYE
                     MEAGDIFVKGNQFLMEKIFSKSIKRQTNAQLEALIRCSVEPVSV"
     gene            7120..8496
                     /locus_tag="AC1PJC_001097"
     CDS             7120..8496
                     /locus_tag="AC1PJC_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HIP6620089.1"
                     /translation="MSNISEKFMEISGKIGSQRHLIAIRDSFISMMPITMAGTVAVLL
                     NVFLRDIPNNMGWTGFAEAMQPIININGYVYFGTIGIMALVFAFTFGYNLSLMYKVNP
                     LAGGLISFASFISTIPQSLTISTALEGVDKSVITALEELGLTIVTTDGVSALETSQWG
                     AIALKYGGATGLFTAMFIGFLATFVYASLVKRNIIIKLPDTVPPAVNKAFAAIIPGTA
                     AIYASSIVAYLVFSVSGQSLSDVVSTYIQMPLLGLSQGLGSVVLLTFLVQLFWFFGLH
                     GHNVLAPIMDGIYGIALNENTAVYEATRSVADLPWLWTRGSFDAYAQMGGSGVTLALI
                     IAIFIFSKREEYKMVAKLSAPMGVFNINEPITFGIPMVLNPLFVIPWLIVPPVCAAIA
                     YLATAAGLIPPVFLAVPWITPPGLYAYLATGGNIMAALVSLFNLFVAFLIWTPFVIAA
                     NKVKAGED"
     gene            8822..9430
                     /locus_tag="AC1PJC_001098"
     CDS             8822..9430
                     /locus_tag="AC1PJC_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004040 - amidase activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HIP6620090.1"
                     /translation="MSYQMIKKQFKLGLFTALIGNLLWSGMVNVSADDTVISDSPTVS
                     ALTKKVEAAKIAAKAAAEKIVAEKAAAAAKAALATNMVSEVALEYTANTYPAGQCTWG
                     AKEMAPWVGNYWGNGGDWAASAAALGYEVGTTPKVGAIAVWTDGGYGHVAYVTDVAAN
                     GHIQVKESNYGGVYYPSNVRGFFDPTTTSEGTVSYIYPPAGV"
     gene            9597..10385
                     /locus_tag="AC1PJC_001099"
     CDS             9597..10385
                     /locus_tag="AC1PJC_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HIP6620091.1"
                     /translation="MFTSLLFAGIVLAACNSSAGTSNSTDQTLLSQIKEEGVIQIGTE
                     GAYAPYSYHDESGKLVGYDVEVAEAVAEKLGVKVEFVETEWDSMIAGLDAARFDTIAN
                     QVGITDERKAKYDFSTPYTYIYGALVTQKDNTDITSFTDLSGKKSANSLTSNWADLAR
                     ENGAEVVGVDGFSQAVELLNTGRVDATINDNLVYLDYVKQHADAPIKVVTLTDDVSTT
                     AFPVAKGNEDLVKEIDAALEELASEGKLAEISNKYFGEDVSKAK"
     gene            10398..11057
                     /locus_tag="AC1PJC_001100"
     CDS             10398..11057
                     /locus_tag="AC1PJC_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HIP6620092.1"
                     /translation="MTERVWQLLLDSFSQILVPGLLVTIPLTILSFTFGLLIAIGTAL
                     VQIAQIPILKQVARFYIWVVRGTPLLVQLYVIFFGLPSLGIVLDAFPSAVLVFSVNTG
                     AYAAETIRASIESVPKGQLEAGYSVGMSFAQTMRRIILPQAFRVAFPPLSNTLIGLVK
                     DTSLAANITVLEMFMATQQIAARTYEPFALYCEVALVYLLFSTILTKLQAYGEKKLAV
                     Y"
     gene            11067..11813
                     /locus_tag="AC1PJC_001101"
     CDS             11067..11813
                     /locus_tag="AC1PJC_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015424 - ABC-type amino acid transporter
                     activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HIP6620093.1"
                     /translation="MIQANGVKLTFGGQQVLKGIDVEVNPGEVVVILGPSGSGKTTLL
                     RSLNFLEKADAGHLVFGEDSYDLAQMTKKEIAGIRKRTAFVFQNYNLFANKTALQNVT
                     EGLIVARKVPKQEAERIGKAALDKVGLSDKYGFYPSQLSGGQQQRVGIARAIATNPEV
                     IYFDEPTSALDPELIGEVLAVMMQLAKEGMTMVVVTHEMGFARAVADRVIFMDGGRII
                     EEGRPEDIFDQPKEERTKQFLARIQKVDVE"
     gene            12179..13120
                     /locus_tag="AC1PJC_001102"
     CDS             12179..13120
                     /locus_tag="AC1PJC_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HIP6620094.1"
                     /translation="MTTLADVARLANVSKMTVSRVINHPEQVTQELRTLVTAAMEELN
                     YKPNVAAKALAQQRTLIVQAVILEKMDVVEPYYIDLLAGIADELNHRNYTLQLVTNPS
                     QITDQCDGYIVTGARKDDYPWLKGLRKPLILFGENQEGLPFVDSDNRLATRSATQFAL
                     SKGYERIVFVGIDLPEAFEKGREEGYKDAMQGRETHLYRLENRSRVAEEFVKNLDYLP
                     ENTCFICASDRLALGVTRGLQALGKSIPNDVGVIGFDGFFLDRMSRPALTTMKQPIRQ
                     MGALSVKHLMTILDGKPLARQGHYCQATLIERETTPQ"
     gene            13303..19608
                     /locus_tag="AC1PJC_001103"
     CDS             13303..19608
                     /locus_tag="AC1PJC_001103"
                     /EC_number="3.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pullulanase"
                     /protein_id="HIP6620095.1"
                     /translation="MKKKSVQNMKRTGMLEKKQIFGIRKLNVGVASVGIAAALFLSGA
                     GQLVQAEEVVLPAPTSSTTLSEQDGGSVEATTTAIEATDSMVAEATAVTETADATAPE
                     EAPIEEGSIRLHFENVDETAPESQGIWTWGGVAEPSDGNQWPTDTANFSSSQVDDYGH
                     YVDIKKSETPGTIGYLVLKNGEKITESDQKVELLVPEQNEAWIASDYTVSSYEPLKDE
                     NVLRINYTREDNNYEGWGVWTWGDTTEASDGWPTGAVDFKLGKYGAYVDIPLSNGLDS
                     KLGFLLINQDNPDLAGNKTIDLAFADRKRHSQIFLRNGDDKVYTNPYFIEEKVELDTS
                     KATPGTKNVTVEASSKAPFNYNESGLVSVTVTNPENAEIVKMEVDTSAIGGGLVPIST
                     ELNRVTIKATSSTAPGTYSLPVKVYDKDNGYYETKLDVTITERIKADGEKDWDEQVIY
                     FMMTDRFYNGDTSNDKLVEGTASNPRGLYQGGDFKGVTAKLDYLKELGVDSIWLTPIV
                     ENIPQNVGSATDGEYYAYHGYWASNFEKLNPHLGSLADFHELIDAAAEKGINIVVDVV
                     LNHAGYGTEETFAGMVRTKEEDKQGDDQLGSLSGLPDFKTEEAAVRNQLVAWQASWLK
                     RSTTAKGNSIYGFRVDTVKHVDDTTWQHFKNELVDRDPDFHLIGETWGANYKDTKGDL
                     GIGTMDSLLDFGFKDIAKYLVNGQLKAAGKELEERSKVLTSATSLGQFLGSHDEDGFL
                     YSLGGAEKEGNLDKLKLAASLLITAKGQPVIYYGEELGQSGQNNWPVYDNRYDFDWSK
                     VETSDIEDHYQKLLAFRNANSTLLSRGDTSTLAGNDSQGWLISKRSYQDQAAYLVFST
                     NTESKEMALEVSGKDVVVTDAYTGKSYQAIEKDGKWVVQVELPTIGQGGTMLLQTEAG
                     DIVNASVQGATEEPIEAGYFRVHFKTLPSDNLSSLGLWTWDDVEKPSSDVGAWPTGAT
                     NFSTAKQDDYGYYLDIKMKDETASKISLLINNTSGENITGDKTIERISTKMNEAWFDE
                     NYQLSLYQPLKEGYIRINYFRTDGNYDQKGLWIWGDVTDLTLGDWPNGIDFENQGKYG
                     AYIDVKLTDLPSSIGFLLLDESKSGDDVKIQQKDYSFKDLKNQTQIFLKDDDATIYTN
                     PYFVNNVRVTGVSHVSLTALEAAFTTLEGADKDSILEKLSVTDKNGQTVAVTDLVLDL
                     TSNKVRVLGDFNQENAGYTLKYGNDSFTTTMSWQLKDELYAYDGELGARVRQAGSVVD
                     MTLWSPSADSVAVVLYDKDDQSKVVGKLAMTKGDKGQWDLELNSHSGFGIADYRGYYY
                     HYEITRGDQAVLVLDPYAKSLAEWNSDLADTDPSYRIAKAAIVDPAEVGPSDLNYATI
                     PNFNQREDAIIYEAHVRDFTSDPAISDELTAQFGTFAAFAERLSYLKDLGVTHIQLLP
                     VMSYYYVNELKNAERMSEYASSNSNYNWGYDPQSYFAFTGMYSTDPTDPMKRIEEFKN
                     LVNEIHKQGMGVILDVVYNHTSKTFLFEDLEPNYYHFMEADGTAKSSFGGGRLGTTHY
                     MSRRVLVDSIKYLVDEFKVDGFRFDMMGDHDAEAIELAFTEAQKLNPNIIMLGEGWRT
                     FTGDANQPVQPADQDWMSSTDTVAVFSDDIRNTLKSGYPNEGQPAFITGGAKSVESVF
                     NNIKAQPGNFLADDPGDVIQYIAAHDNLTLFDIIAQSIKKDPSIAENYTEIHQRQRLG
                     NLLVLTAQGTPFIHSGQEYGRTKQFRHPDYKEPVSEDKVPNKAHLLTNADGTPFDYPY
                     YIHDSYDSSDAVNKFDWTKATDEALYPENTRTQAFTKGLIALRKSTDAFRLGTKEEVE
                     QKVSLISIPGQNGIAKNDVVIAYQTIASNGDRYAVFVNADSKERSFVLSDIYKELLKG
                     QVLVDGKRAGIAALTDLVGVTLTDDAVVLAPLTATVIRLPYITTAVPDTAPTAEEKPS
                     LDFTTKERTEEKILPIVEEIRYDASLSTDQSYVLQEGKTGKKVRVYQDVLIDGKVVAT
                     NLLSETVVDSETRIVVKGSMEAKKEAEKPSLSTTAQASGQATSGASKASLPITGDRQS
                     DLALLGLGLAGLGLTVAAQGRTKKSEE"
BASE COUNT         5903 a         3688 c         4667 g         5612 t
ORIGIN      
        1 atgagggagg gaaagtgtat tgaaaactct taaattagtg acaattggtg gcggttcaag
       61 ttacacaccc gaattggttg aaggtatgat tcttcgtgca catcaattac ccattcgaga
      121 atggtggttt gttgatgttg aacaaggcgc aaaaaaacag gagatcgtag ttgagttagc
      181 acggcgaatg gtcgaaaaag caggcctgga ctggaagata gagtcgacct tagacagaag
      241 agaagcattg atagaggctg attttgtaac gtctcagttc cgagttggcc aactacctgc
      301 aagatactta gatgagacca ttcccttgag ttatgggatg ctggggcaag agaccaatgg
      361 ggctggagga atctttaaag cttttaggac cattgaagca tataaaggga ttatcaagga
      421 tatgaaggac ttgtgtccga atgcttggtt gattaatttt acgaatcctg ctggtatcgt
      481 aacggaagcc attgctaatg aactccactg gaagaaagtt attggtctgt gtaatatccc
      541 tattggtcaa aagaaacttg ctgctcggat tttaggccaa tcagaaggag acctaagtac
      601 gcgccatatt gggttaaatc attttcattt tcatgaagtt tgggataagt atggggaaaa
      661 tcgtacgcaa gtagtcttag aaacattgta tggggatttg agagaggaga cgccagaagc
      721 agtcaaaaat attaccaatc tagagtttcc tattcaattg cttcggacga ttggaatgtt
      781 gccatgtgat taccatcgtt attatttttt ggaacaagaa atgttagagg atgctttgga
      841 acagtatcgt cagggtaatg tacgagccaa ggttgttcaa gaagtagaga cagaattgtt
      901 tgagctttac aaagacccac aattgaaaga caaaccaaaa caactggaac tacgtggggg
      961 tgcctactat agtgatgttg cctgtcaaat tatttgtgct atccataatg atagtagaga
     1021 agaattgacc gtatctactg taaatagagg agttattccc tatctacctg aaaattgtgt
     1081 ggtagaagtc acctcgatta tctctgcgca aggagcaact ccactagctt gtccaccaac
     1141 tccgccgatt gtaaccggct atttacaact gatgaagcaa atggagcttg tcactgttca
     1201 ggcagcaatg acaggtgatt attcactggc tttacaagct tttacactca acccgcttat
     1261 ttcaaacgga tcacaagctg aagcgctatt gcaagatatg ttacttgcac atgagaatta
     1321 tttgccacaa ttcgcaccag ttatacagca cataaaagag agaaggaaca atcaatgact
     1381 aaagacaagg tattttatca atttccaaca aattttttgt ggggttcttc tacatcagga
     1441 cctcaaagtg aaggaatcga gccaggtgat ggaaaaggac agaacaactg ggattattgg
     1501 tatagtattg agcctgaacg atttcataac aaaattggcc ctagtcaaac atcaacattt
     1561 tacaaacatt atgaaaaaga tattgattta ttagttgaaa cagggcacac tgtatttcgg
     1621 acttccattc agtggtcacg tctcatacca acaggtactg gagaaattaa tcaagaagcg
     1681 gtgtccttct atcgttcggt tttttctttg gtaagagcaa agggaattca actctttgtc
     1741 aatctttatc actttgatct tccctattgt ttacaagaaa aaggtggttg ggaaaataag
     1801 gaaattgttc gagcctacga agtatatgca cgcacatgtt ttgagttgtt tgatgattta
     1861 gtcgatcgtt ggattacctt taatgagccg attgttccag tagagtgtgg ttatctagga
     1921 atttatcatt atccatgtaa ggttgatgca aaatcggcag ttgcggtggc ttatcataca
     1981 cagttggcaa gttctttagc tgtaaaggca tgtcatgagg taaatcctca caaaaaaatc
     2041 gctattgtct tgaatctaac tccagcctac cctcgtagtg agcaagcaga ggatataaaa
     2101 gcagctcgaa ttgcagaatt gtttcaaaca aagagctttc tagatccgtc tgtgttagga
     2161 gaatatcccg atgaattagt cgagctgatt gatgcatatg gtctaatgcc agaggtcagc
     2221 gatgaggaat tagccattat taaggaaaat cgtgtggact tcctaggagt gaattattat
     2281 caaccccttc gggtacaagc tccaaccaat agttggaaag agggagagcc tctaactccg
     2341 gaacatttct ttgccccata tgatatgcca ggtaaaaaaa tgaatccgca tagaggttgg
     2401 gagatttatg aaaaagggat atatgatatt gcgataaata ttaaggaaaa ttaccataat
     2461 atcgaatggt ttgtaacaga aaatggtatg ggagttgaag gagagagcgc atttaaagac
     2521 aatggactca ttcaagatga ttaccggatc gaatttatcg aagatcactt aattgaatta
     2581 catcgagcta tccaagaagg ggcgaattgt aaaggataca tgttatggac ctttattgat
     2641 tgctggtctt ggttaaatgc atacaagaat cgctatggat tagttgaact ggatctagac
     2701 acgcaagaaa gaattgttaa gaaatcaggc aagtggttca agaaattgag cgatgctaat
     2761 ggttttcatc gctaggagga aatgatggta gaactgggct tttcaattta tcctgaaaac
     2821 tattcgctag aagagagtca agcttacatt aaacttctgc accaatacgg agcaaggcgc
     2881 ttatttatga gtttgttgca acttgaaaat ggagaccgaa cagttttcga attgtatcaa
     2941 aaactagttg actatgcaaa tcaactaggg atgactgtca ttgcagatat cagtcccgat
     3001 tttatcgcag cgcaaggttg ggatggggca ttgatggagc gtgcagctga actggggttg
     3061 gctgggattc gtcttgatga agctcttctt ttggaagaaa tcattgagat gacacataat
     3121 ccacacaaca taaaagttga attgaatttg agtacagata agaccttgct gtccaatctt
     3181 ttggctagtg ttgcaaacag ggataatatt attgcctgcc ataattttta tcctcatgct
     3241 tttacaggtt tatccgaaga gcacttctta gagatgtcat ctttttatca tcaatccggt
     3301 ataagaactg cggcatttgt cagtgcacaa acagcttctg aaggaccgtg gccattatct
     3361 gaaggcctac caactttaga agatcatcgg ttctggcatc ttcccttgca aattgcttgg
     3421 atgaaggcaa cgggttttat tgattctatt ttgatttcaa accaatttat ctcggaggag
     3481 gaactacaat ccattcaaac agttttaaat gaagatacaa tcagcctcat ggttgatatt
     3541 gaggagggtt tgactcccgt tgaaagagag attgtagcgt ttaatcatgt ttatagaggt
     3601 gatatttctg cttatgttct gcgttcaacc atgccccgtg tggtgtataa ggacgcatct
     3661 gtaccggctc ggtcagacca agcaattcct gtgggacgag gggatatctt aattgataat
     3721 gatttatatg gtcgctacaa gggtgaattg caaattgcac tcaaagaatt taccatcagt
     3781 ccaaaggtaa ataaggtcgg acgaatcagt ccagactatc ttcccttgtt acgctttatt
     3841 aaaccgtggc aagactttaa actggtcata gcttccgagc actttcatta atgatgcgga
     3901 aaaagtaggc acctctagaa atcgctttca tgttataata tacatataag aaatcaaaga
     3961 ctgttggagg aaaggaggga gcatgttatc taaaaaagaa gtacgcttgt tagaggcttt
     4021 acttgcaaaa caggagacat tcgtaccaag catcgagcta gccaaggtat tatcagtgag
     4081 tgatcgaacg gtaagaacgt atattcatca actgacatct tctttagaaa atagcggtgc
     4141 tcatatcctt tcaaaacaag gtagtggtta ttgtttacag attgaacggc cagttgagtt
     4201 tgaaatgttt tggcaggagc aattgctcct aaaaaagcgg ttaaccgatt taacccaact
     4261 agaagaagcg ggggatcggc aacggtatat tctcaataag ctcttgtttg aggatccgat
     4321 tcagtcacca gattgtttac aaagagagct attcattgga aagactacgc ttcattccat
     4381 tttggcggat attcgaaaac tatttatccc ctatcaatta gaactccttg tgacacgtaa
     4441 aggaattgaa ctaaaggggg atgaacctgc tatccgtcac tttattatgg attacttttt
     4501 tgatgaggga aatgttcaat cggtttatgg ggttgtcgaa accaatctat tgccagatat
     4561 acggttcaca gacttaatgt taatcgtttt agacgagtgt cgggatgcta aattacgttt
     4621 atcagatttt gtcatgcaga atctagtgct ccatatcgct cttcttttac aacggttgaa
     4681 aatcgggtct ggtctagacc gattcccaat accggagcgt attcagtcgt ctcaagagta
     4741 tcttgtggca caacggatta tagaccgaat cgaagaaacg tttcaagtga cgataccgtc
     4801 agaggaagca aattacattg cgttgcacct taaggtaaaa ctaacgggga atccaaatca
     4861 agatggtgag gtggaagaga tatttagaca gaatgtggag aatagtcttc tacatttgtc
     4921 acatttaaca ggcctagagt tgtcaaagga tcagcaacta ttcaaaggag ttctggccca
     4981 tttgatgccg ttacgtattc gtttggagaa taatattcaa ctgggaaatc ccctaactgc
     5041 tgaaattaaa gaccaatatt ttgaggcttt cgaattaaca aaaacggcat ttgcagcgat
     5101 accagaacta atggggtatt cgatttcgga tgatgagtgg gcttacctta ccctacatgt
     5161 gatggcggca attgaacgtt atcagggatt taagaagacc agagtattgg tagtctgtgc
     5221 taccggaatt ggaagtgcat tgatgttaaa gaatcgcttg gagaaagaat tttcatccag
     5281 cttagaaatt cttgatacgg ttagttatta tgaagttaca gaggaacgac taaaagatgt
     5341 tgatttgatt atttcatcca ttagcttgtc gaatctaatt tttatgacgc cggttatcaa
     5401 tgtcagcgtc ttcctatcag agaaggacat tgaggctatt cgatctcatc tacagcaaac
     5461 gaccccagtt attcctgacc aaggggaaaa tgtgctaatg gaagtaggtc aggctaagca
     5521 gattgcagaa gcagtatttg ctccacatag aataatctat cttgaggagg attgtgatcg
     5581 agaagtagcc ttgaagcaac tagtaactac tttgaacgaa tccattgagc ctgattttgt
     5641 taatcgcttt atagaacaag tgaatttacg agaatcttac agtccggttg tctttgggga
     5701 tcggttagcc ttccctcatc cagccttgcc gatgagttat tcagaacaaa ttgttgtagg
     5761 gatatataag aatgctgtcg attggggcca tggaaagcaa gttcaattcg tcttcctatt
     5821 gtcaccgtca aagggtcgaa atgcatttct gaagtatatc tcaccttgtc tggttgattt
     5881 tgttcaagat agagttctcc aagaacgttt gttacatcat ccaaattata aagaattaat
     5941 tgatattttt attcccctca ttcaaagaaa ggggtaggag gagtttttta tgaaacacat
     6001 tatgttagtt tgtaacgcag gtatgtctac aagtatgctt gtaactaaga tgcaaaaagc
     6061 agcagaagaa acaggggttg aagcaactat ttgggctgtt ccagtatctg aagccgatac
     6121 tgaagttgct caaaaagaga ttgatgtatt acttttaggt ccacaagtaa aattcctatt
     6181 gaacgactat aaggcaaaat ttgagccaac tattaaggta gatgctatca atatgatgga
     6241 ttacggagtg atgaacggag ctaaggtgct agaggctgcc ctaaaaatga tggaggggta
     6301 gtatgaattc tccagagtat cttgaagcga ttatggggct aatcatgtac ggtggtgaag
     6361 caaagggctt cgctagccag gcgattcgag cagccaaaga aggtcgtatt gacgaagcgg
     6421 aacagctgct ccaagacgca acagcttcat tgaatattgc ccataaatca caaacacaat
     6481 tattagcaaa agaagcaagt ggagagtctg ttgaattatc tttgttaatg gtacatggac
     6541 aagatcactt gatgaatgct ttgacattta ttgatttagc gaaagagttc gtagatcttt
     6601 ataaacagat tggataatta taggaggact gggttatgaa gatatcaaaa ataggtcaag
     6661 ttccaattga gcgacttttc gctactattc gccaatcctt aaaagatgat tttcagcaaa
     6721 atacgggttc caccttgcaa gatcaagaca ttacccaggg acttacttat actaaaacat
     6781 ttggtgataa aggacaacat agtgtcaagg taactgtcga agagtttaca gctccttatt
     6841 gctatgcagt ttgtttccat tctaatcgag gaaaagagca tgttcgctac cagttagagg
     6901 atttagggaa tgctcaaacc aatatagaat attcttatga gatggaggct ggtgatattt
     6961 ttgtaaaagg taatcaattt ctcatggaaa aaatcttttc aaaaagtata aaacgtcaga
     7021 caaacgccca gttagaagca ctgattcgtt gctcagttga gccggtatca gtttaacatt
     7081 taggacatat aaaacaaaaa atagaaaagg agacagaata tgtcaaatat ttctgagaaa
     7141 ttcatggaaa tatctgggaa aattggttcg caacggcatt tgattgcgat tcgtgattcc
     7201 tttatttcta tgatgcccat tacgatggca ggtacagtag ccgttctatt gaacgtcttt
     7261 ctgagagaca tcccaaataa tatgggttgg acaggttttg cagaggctat gcagcctatc
     7321 attaacatca atggctatgt ttattttgga accattggaa ttatggcgct tgtttttgcc
     7381 tttacctttg gttacaactt gtctctgatg tacaaggtca atcctcttgc aggcggtttg
     7441 atttccttcg catccttcat ttcaactatt cctcaaagcc ttaccatttc aactgctttg
     7501 gaaggggtag ataaatccgt tattactgcc ttggaggagc ttggtttaac cattgtcacc
     7561 accgacggag tttctgctct ggagacaagt caatggggag caatcgcttt gaaatacggc
     7621 ggtgcaactg gtctcttcac cgcgatgttt attggtttct tggctacctt tgtctatgca
     7681 agtttggtga aacgcaatat catcatcaag ctaccagaca ctgttccgcc ggcagtcaac
     7741 aaggcttttg cggctattat tcctggaaca gcagcgattt atgcttcttc tatcgtggct
     7801 tatctcgtat tttctgtatc tggtcagtcc ttgagtgatg tggtgtcaac ctatattcag
     7861 atgcctttac ttggtttatc acaagggctt ggctcagtcg tactcctaac cttcctcgtt
     7921 caacttttct ggttctttgg tttgcatgga cacaatgtct tggcaccgat tatggacggg
     7981 atttacggta tcgccctgaa tgagaatact gctgtctatg aagcaacaag aagtgttgca
     8041 gatttgcctt ggctttggac acgtggatcc tttgatgcct atgctcagat ggggggatca
     8101 ggtgtcaccc tcgcgttgat tattgcaatt ttcatcttct ctaaacggga agaatacaag
     8161 atggttgcca agctatcagc tccgatggga gtctttaaca tcaacgagcc gattaccttt
     8221 ggtattccga tggtattgaa tccactcttt gtcattccat ggttgattgt gcctccagtt
     8281 tgtgcagcta ttgcttattt agcgactgct gctggactca ttcctcctgt ctttctagct
     8341 gtaccttgga ttactcctcc aggtctctat gcttatctgg caacaggtgg taacattatg
     8401 gcggccctgg tttcgctctt caacctcttt gttgccttct tgatttggac gccatttgtc
     8461 attgcggcca acaaggttaa ggctggtgag gactaatgtt ttccaaaaac aaatctccct
     8521 tcttactagc gcttggtttc tttctgattg cgattagtcc actctttgga aataagtatc
     8581 tcaatattat ttctggtttg gtgttcatct tactcagtgt acttagaagt aggagaaaat
     8641 aattacacta aatagaaaac gacttccgta ttggaggtcg tttttttgac aaaaagtccg
     8701 gacactgtga ttgttaagag attgcaagtt atctgtaata tttgttacat ttctttaagc
     8761 tctctgcaag gattatccct taggatagat agggcagaaa aacacgaagg aatcaaatat
     8821 tatgagttat caaatgataa aaaaacaatt caaattggga ttgtttacag ccctcatagg
     8881 aaatctttta tggtcgggaa tggtgaatgt cagtgcagat gacacagtta taagcgatag
     8941 tccgacagta tcagcgttaa caaaaaaggt tgaagctgca aaaatagcag ccaaagctgc
     9001 tgcagaaaaa attgtggctg agaaagctgc tgccgctgca aaggctgctt tggctaccaa
     9061 tatggtgtca gaggttgctt tggaatatac ggctaatacc tatccagctg gtcagtgtac
     9121 ttggggtgcc aaagaaatgg ctccttgggt tggaaactat tggggtaatg gtggagattg
     9181 ggcagctagt gcggcagcgc ttggatatga agtgggaact actccaaaag ttggcgctat
     9241 tgctgtatgg acagatggag gctacggtca tgttgcctat gtaacagatg tggctgctaa
     9301 cggtcacatt caagttaagg aatcaaacta tggtggagta tactacccaa gtaatgtccg
     9361 aggtttcttt gatccaacaa cgactagcga aggaacagtc agctatattt acccaccagc
     9421 tggagtataa ttaatatgag atataaagac cgagtaggtc tttttttatg ctccgatact
     9481 tgattaaaat ttttaatgtc tctgatagaa aaaatatatt ggctggaaat tgttattcat
     9541 gatactattg taaaatctga aaaagaaagt gtgttttaat tatgaagaaa atagctatgt
     9601 ttacaagttt attgtttgcg ggtatcgtgt tagcagcctg caattcatct gcaggtacat
     9661 cgaatagtac agaccaaacc ctcttgtcac aaattaagga agagggcgtt attcaaatcg
     9721 gtactgaagg tgcctatgct ccttactctt accacgatga gagcggaaaa ttggtcggtt
     9781 atgatgtaga agtagccgaa gccgttgctg agaaattggg tgtcaaggtg gaatttgttg
     9841 aaacagaatg ggattccatg attgcaggtt tggatgcggc ccgttttgat accatcgcta
     9901 accaagtcgg tattacagat gagcgtaagg caaaatacga tttttcaaca ccatatacat
     9961 acatctatgg agccttggtg acgcaaaaag ataatactga cattacaagc tttacagatt
    10021 tatctggtaa aaaatcagcc aacagcttga caagtaactg ggcagatttg gcgcgtgaaa
    10081 atggtgcaga agttgtcggt gtggatggat tctctcaggc agttgaattg ttaaatacag
    10141 ggcgtgtgga tgctaccatc aatgacaact tggtgtactt ggattatgtg aaacaacatg
    10201 ctgatgcacc gattaaggtt gtgaccttga cggatgacgt atcgacaaca gccttcccag
    10261 ttgcaaaagg aaatgaagat cttgtgaaag agattgatgc agccttggaa gaattggcta
    10321 gtgaaggaaa attagctgaa atttcaaaca aatactttgg tgaagacgta tcaaaagcta
    10381 agtaatcagg agaaacaatg acagaaagag tatggcaact attgcttgat tcattttcac
    10441 aaatacttgt tccaggattg ttggtgacta tcccactgac aatcctgtct tttacctttg
    10501 gcttgttaat tgctattggg acggccttgg tgcaaattgc tcagattccc attctcaaac
    10561 aagtggctcg tttctatatt tgggttgttc gagggacacc actcttggtt caactctatg
    10621 tgatattctt tgggctacca agtctaggaa ttgtcttgga tgcctttccg tcggcggttt
    10681 tggttttttc tgtcaataca ggtgcctacg ctgcggaaac catacgggct tctatcgagt
    10741 ccgtgcctaa ggggcagttg gaggctggct attctgtcgg gatgagtttt gcccagacca
    10801 tgcgtcggat tattctccca caggcctttc gagtggcctt cccgcccttg tccaacacct
    10861 tgattggatt ggtcaaggat acatcgctgg ctgccaatat taccgttttg gagatgttta
    10921 tggcaactca gcagattgca gcaaggacct acgaaccgtt tgccctctat tgtgaggtgg
    10981 cccttgttta tctactcttt tcaactattt tgaccaagct tcaagcctat ggtgagaaga
    11041 agttggcagt ctattagggg gttcagatga ttcaagcaaa tggagtaaag ctgaccttcg
    11101 gtggtcagca ggtgttaaaa ggaattgatg tagaggtcaa tccaggtgag gtggtcgtca
    11161 ttttaggtcc gtctggatcg ggaaaaacga ctcttcttcg ttctttaaac tttttggaaa
    11221 aagctgacgc aggtcactta gtcttcggtg aggacagcta tgacttggct cagatgacca
    11281 agaaggaaat cgcaggcatt cgcaagcgca cagccttcgt ttttcaaaac tataatctct
    11341 ttgccaacaa gactgcctta caaaatgtga cggaaggtct gattgtggct cggaaagtac
    11401 ccaaacaaga ggctgaaaga atcggtaagg cagccttgga caaggtggga ctatctgata
    11461 aatatggttt ctatccaagc cagctatcag gaggtcagca gcaacgggtc ggcattgcca
    11521 gagccattgc gaccaatcca gaggtcattt attttgatga accaacctcg gccttggatc
    11581 ctgagttaat cggtgaggtc ttggctgtca tgatgcagtt ggcaaaagaa ggtatgacca
    11641 tggtggttgt gacgcacgag atgggctttg cgcgtgcggt agctgatcga gtcatattta
    11701 tggatggtgg tcggattatc gaagaaggtc gaccagaaga tatttttgac cagccaaaag
    11761 aagaacgtac taagcaattc ttagctcgca ttcaaaaggt agatgttgag taagctaagc
    11821 aaattaattt atctcattca tttccataat cgtacagaaa atggacagaa tttgacaaag
    11881 atacttcaat tgttagacat tgattggtct agcggttgga gtattttttg tttagaggga
    11941 atgggtattc atatatagta cttttagcac gaggcgatga gccgcaggca tagatgaagt
    12001 taggcaaggt gagctaagga agtaatagaa ggaaaactaa ataacgataa atgtattcga
    12061 aaggtcttta ctttttagta ataaatagta tataataacc taaagaaaac gtttgcacaa
    12121 ttttgactgt ttgcttgcta aaagataagc aacagaaata gaattaggga ggagttctat
    12181 gacgacatta gccgatgtgg ctaggttagc caatgtatca aagatgactg tttcgcgtgt
    12241 catcaaccat ccagaacaag ttacacaaga gctgcggacg ctcgtaacag ctgcgatgga
    12301 agaattaaac tataagccaa atgtggcggc caaggccttg gcccagcaac ggacactgat
    12361 tgttcaggct gtcattctcg aaaagatgga tgtggtagag ccgtactata tcgaccttct
    12421 tgcaggaatc gctgatgagc tcaatcatcg aaattatacc ttgcagttgg tgaccaatcc
    12481 aagtcagatt actgatcaat gtgatggtta cattgtgact ggcgctcgca aggatgacta
    12541 cccttggttg aaagggctgc ggaagccatt gattttattt ggggagaatc aagaaggcct
    12601 tccttttgta gattcagaca atcgtttggc gactaggtcc gcaacccagt ttgctttatc
    12661 aaaaggttat gagaggattg tttttgtagg gattgacttg ccagaagcct ttgaaaaagg
    12721 gagagaagaa ggctacaaag atgcgatgca gggccgagaa actcatctct atcgattgga
    12781 aaatcgttct cgtgttgcgg aagaatttgt gaaaaatctt gattatttac cagaaaacac
    12841 ctgttttatc tgcgcatcgg atcgtctcgc tcttggggtt acaagaggtt tacaagctct
    12901 aggaaagtct attccgaatg acgttggggt gattggtttt gacggcttct ttttagatag
    12961 gatgtctaga ccagctttga cgacgatgaa gcagccgatt cgtcaaatgg gggctcttag
    13021 cgtcaaacat ttaatgacga tattggatgg caagcctctg gctagacagg ggcattactg
    13081 ccaggcaacc ttaattgaaa gggagactac acctcagtag tctctttttt tgggtcagtg
    13141 ggcggtctag gagcaaaaga ggagggggct gtttattcta tttttgttag atagtagctc
    13201 aaaacttgtt accgttaaca tttaagaaaa cgtttgcaaa gactccttgg aattgtatat
    13261 actggtagtg tacaattcaa acttatttat atggaggagt ctatgaaaaa gaaatccgtt
    13321 cagaatatga aacgaacagg gatgctagag aagaaacaga tttttggcat tcgtaaacta
    13381 aatgtaggtg tagcctctgt tgggattgcg gctgctctgt ttttaagtgg agcaggtcaa
    13441 ctagtgcagg cagaggaagt tgtcctccct gcgccaacta gttcaacgac tctttcggaa
    13501 caggatggtg gctcggtaga agcgaccaca actgcgatag aagctacaga ttctatggta
    13561 gctgaagcga cagcggtaac agaaacagcc gatgcaactg ctccagagga agctcctatc
    13621 gaagaaggta gcattcgtct gcactttgaa aatgtagatg aaacagcacc agaaagtcaa
    13681 gggatttgga cttggggagg agtggcagag ccgtccgatg gtaatcaatg gccaacggat
    13741 acagcgaatt tttcaagcag tcaggtagat gactacggcc attacgttga tattaaaaaa
    13801 tctgagacac caggaacgat tggctatctg gttctcaaga atggggaaaa aataacagaa
    13861 tcggaccaga aagtggagct tcttgttccg gaacaaaatg aggcttggat tgctagcgat
    13921 tatactgttt ctagctatga gccactcaag gatgaaaatg tcctccgtat caactacacc
    13981 cgtgaagaca ataattatga aggttggggc gtttggactt ggggcgatac gactgaagcg
    14041 agtgatggct ggccaacagg tgccgttgat tttaaacttg gcaaatacgg cgcctatgtc
    14101 gacattcccc tctcgaacgg tttagattct aagcttggat ttctgctaat caatcaggat
    14161 aatccagatt tggcaggcaa taaaaccatt gatttagctt ttgcagatcg taaacggcat
    14221 agccaaatat tccttcgaaa cggtgacgac aaagtttaca caaatccata ctttatcgaa
    14281 gaaaaagtag aattagatac aagtaaagct actccgggaa caaaaaatgt gactgttgag
    14341 gctagtagca aagcaccatt caactacaat gaaagcggct tggtatctgt aactgtcacc
    14401 aatcctgaaa atgctgagat tgtcaaaatg gaagttgata caagtgccat cggtggaggc
    14461 cttgtgccaa tctctactga gctcaatcgt gtgaccatta aagcaacgtc tagcacagcg
    14521 ccaggtacat atagtcttcc tgtaaaggtc tatgacaagg acaacggtta ctacgaaaca
    14581 aaattggatg tgaccattac agagcgtatc aaggcagatg gtgaaaaaga ctgggacgag
    14641 caagtcatct acttcatgat gacagaccgt ttctacaatg gagacaccag caatgacaag
    14701 ctagtggaag gaacagcctc caacccacgc ggtctttacc agggcggtga cttcaaagga
    14761 gtgacagcca agctggacta cttgaaagaa ttgggtgtgg actctatctg gttgactccg
    14821 attgtggaaa atattccaca gaatgttggt agcgcaacag atggagagta ctatgcttac
    14881 catggttatt gggcatccaa ttttgagaaa ctaaatccgc atttgggaag tttagccgat
    14941 ttccacgaat tgattgatgc cgcagccgaa aaaggtataa acattgttgt tgacgtggtg
    15001 ctgaaccatg ctggctatgg tacagaagaa acctttgcag gtatggtacg gactaaggaa
    15061 gaagacaagc agggagatga ccaattaggc tcattatctg gattaccaga cttcaagaca
    15121 gaagaagcag ctgttcgcaa tcagttggtt gcttggcagg catcttggtt gaaacgctca
    15181 acaactgcca agggcaattc tatctatggc ttccgtgtcg atacagtcaa acacgttgat
    15241 gataccacct ggcaacattt caaaaatgaa ttggtggata gagaccctga cttccacttg
    15301 attggggaaa cttggggagc taactataaa gataccaagg gtgacttggg aatcggtact
    15361 atggacagtc tgttggactt tggctttaag gatattgcca aatatctggt caatggtcaa
    15421 ctaaaagcag ctgggaaaga gctggaagaa cgtagcaagg ttctgactag tgcaacttct
    15481 ctaggtcaat tcttgggcag tcacgacgaa gatggtttcc tctacagtct cggtggcgca
    15541 gaaaaagaag gaaatctgga caaactgaaa ttggctgcta gtcttttgat tactgctaaa
    15601 ggtcagccag tcatttacta cggtgaagaa ttaggtcaat ctggacaaaa taactggcca
    15661 gtttatgaca accggtacga tttcgattgg agtaaggtag agacaagtga catagaggac
    15721 cattaccaaa aattgttggc tttccgcaat gccaattcaa cattgctctc acgtggtgat
    15781 acaagcacac ttgctggaaa tgatagccaa ggttggctca tcagcaaacg cagttaccaa
    15841 gatcaagctg cctatcttgt cttctcaacc aataccgaga gcaaggaaat ggcgcttgaa
    15901 gtatctggta aagatgtggt ggtcacagat gcctacacag gaaaatctta tcaagctatc
    15961 gagaaagacg gtaaatgggt tgttcaagtc gaacttccaa ctatcggtca aggtggcacc
    16021 atgctccttc agacagaagc aggtgacatc gtcaatgcaa gtgtgcaagg agcaactgaa
    16081 gaaccaattg aagcaggcta cttccgtgtt cactttaaaa ctctaccatc tgataattta
    16141 tctagcctag gtctatggac ttgggacgat gtggaaaaac catcgtcaga tgttggtgct
    16201 tggccaacag gtgcaaccaa tttcagtacc gctaaacagg atgactatgg ctattatctg
    16261 gacatcaaga tgaaagacga aacagccagc aagattagtc tgttgattaa taacacttct
    16321 ggtgagaaca tcacaggtga caagactatt gaacggatta gcaccaagat gaatgaagct
    16381 tggtttgatg aaaactatca actcagcctc tatcaaccgc tcaaagaagg ctacatccgt
    16441 atcaattact tccgtaccga tggcaattat gaccaaaaag gtctctggat ttggggtgat
    16501 gtgactgacc ttaccttggg tgactggcca aatggtattg attttgaaaa ccaaggcaag
    16561 tacggtgcct atattgatgt caaattgaca gatttaccaa gttccattgg cttcttgcta
    16621 ttggatgaaa gcaagtcagg agatgatgtg aagattcaac agaaagatta tagctttaaa
    16681 gatttgaaaa atcagacaca aatcttcctc aaggatgatg atgcgactat ttacaccaac
    16741 ccttattttg tcaataatgt ccgtgtgaca ggcgtttctc acgttagcct aacagcctta
    16801 gaagcagcct ttacaacatt ggaaggtgcg gataaggata gcatcttgga gaaattgtct
    16861 gtaacagata agaatggtca gacagttgct gtgacggacc ttgtcttgga ccttactagc
    16921 aacaaggtgc gagtccttgg ggatttcaac caagaaaatg cgggctatac cctcaaatat
    16981 ggcaatgata gcttcacaac aactatgagc tggcagttga aggatgagct atatgcttat
    17041 gatggagagc ttggtgcgcg tgtgcgtcag gctggtagtg tcgttgatat gaccctatgg
    17101 tctccaagtg cagacagtgt ggcagtcgtt ctttatgata aggatgacca atctaaggtg
    17161 gtcggtaaat tagccatgac caagggcgat aagggacaat gggacctcga attgaacagt
    17221 cactcaggtt ttggtatcgc ggactatcgt ggttactact accattatga aatcactcgt
    17281 ggggatcaag ctgttcttgt tttagaccca tatgctaaat ctttagcgga gtggaatagt
    17341 gatttggcag atacagatcc atcttatcgg attgcaaaag ctgcgattgt ggatccagca
    17401 gaagttggtc caagtgattt gaactatgcc acaattccta acttcaatca gcgtgaagat
    17461 gctattatct atgaggctca tgtccgtgac ttcacatccg atcctgctat ttctgatgaa
    17521 ttgacagctc agtttggcac ctttgcggcc tttgcagagc gactcagcta cctcaaagac
    17581 ttgggtgtga cccatattca gttgctacca gttatgagct actattatgt caatgaattg
    17641 aaaaatgcag agcggatgag cgagtacgca tcaagcaaca gtaactacaa ctggggctat
    17701 gatccacaga gctactttgc ctttacaggt atgtattcta cagatccaac cgatccaatg
    17761 aaacgcatcg aggaattcaa aaacctggtc aatgaaatcc acaaacaagg catgggtgtg
    17821 attttggatg tggtctataa ccacacttct aagaccttct tatttgaaga cttagagcca
    17881 aactattatc acttcatgga ggctgatggt acggctaaat caagctttgg tggtggtcgt
    17941 ctgggaacca ctcactacat gagccgtcgt gtcttagtcg attccatcaa gtatcttgtg
    18001 gacgagttta aggtagatgg tttccgtttc gatatgatgg gtgaccatga tgccgaagca
    18061 attgagctgg cctttactga ggctcaaaaa ctcaatccaa acatcattat gcttggtgaa
    18121 ggatggagaa cctttacagg tgatgccaat cagcctgttc agccagcgga ccaagactgg
    18181 atgagttcaa cagatacggt tgcggtattc tcagatgaca ttcgcaacac acttaaatct
    18241 ggttatccaa acgaaggtca gccagccttt atcacaggcg gtgctaagag cgtagaatct
    18301 gtcttcaata acatcaaggc acaaccaggc aacttcttgg ctgatgatcc aggtgatgtg
    18361 atccagtata ttgctgcgca tgataacttg accctctttg atatcattgc tcagtccatc
    18421 aagaaggatc catcaattgc tgaaaattac actgaaattc accaacgtca acgcttgggt
    18481 aatttactag tcttgactgc acaagggaca ccgtttatcc attctggtca ggagtatgga
    18541 cggaccaaac agttccgcca tcctgattac aaggagccag tttcagagga caaggtaccg
    18601 aacaaagcgc atttgttgac aaatgctgat ggtacaccat ttgactatcc atactacatc
    18661 catgattctt acgattcatc ggatgcggtc aacaagtttg actggaccaa agcgacagat
    18721 gaggcgctct atccagagaa tacccgtact caggccttta caaaaggatt gattgccttg
    18781 cgcaaatcta cagatgcctt ccgtttggga acaaaagaag aagttgaaca gaaggttagc
    18841 ttgatttcaa ttccaggtca aaatggcatt gctaaaaatg atgtggttat tgcctatcaa
    18901 accattgcaa gcaacggtga tcgctatgct gtctttgtca atgctgacag taaggaacgt
    18961 agttttgttc tttctgatat ttacaaagaa ttgcttaagg gtcaagtgct ggtcgatggt
    19021 aagcgggctg gaatagcagc gctgactgat ttggtaggtg tgacattgac agatgatgca
    19081 gttgtgcttg cgccattgac tgcaacggtg attcgcttgc cttacatcac tacggcagtt
    19141 ccagatacag cgcctactgc tgaagaaaaa ccaagtctag actttactac caaggaacgt
    19201 acagaggaaa aaattcttcc tatcgtagag gaaattcgct atgatgcaag tctctctacc
    19261 gatcaatctt atgtccttca agaaggcaaa actggtaaga aagttcgggt ttatcaggat
    19321 gtcttgattg atggtaaggt agttgcaact aatttgttat cagaaacagt tgttgatagc
    19381 gaaacacgca ttgttgtgaa aggcagtatg gaggctaaga aagaggctga aaaaccgagt
    19441 ctttctacta ctgctcaagc atctggacaa gcgacaagtg gtgcaagcaa ggcgagtctg
    19501 ccgattacgg gtgaccgaca aagcgatttg gcacttctag gtctcggact tgctggactt
    19561 ggtttgacag ttgctgcgca aggaaggact aaaaaatcag aagagtaata atatttggct
    19621 ctccagagga gcactactca aaaccttgtg aatgtcttat aaatacaaga gttgagagta
    19681 tcacttccct ctagaagagg ttggtttcaa accaacctct tcttttatgt tttttgaggt
    19741 tcttttaaat ttttaggtaa aataacgtct atttattgat tattagaata aatgggctgg
    19801 tgaactatag gaaggaattc tgattaaatc agccattaaa gttcggaaat agtccaatag
    19861 tgaacacaag
//
LOCUS       DBNFCX010000034        19288 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.034, whole genome shotgun sequence.
ACCESSION   DBNFCX010000034 DBNFCX010000000
VERSION     DBNFCX010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 19288)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19288)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19288
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.034"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..774)
                     /locus_tag="AC1PJC_001104"
     CDS             complement(<1..774)
                     /locus_tag="AC1PJC_001104"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003603852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HIP6620096.1"
                     /translation="MPNKDKNIPKRRFKAFENADAWELRKIFEIADRFDNLRVPIASS
                     LRVSGSTPYYGANGIQDYVEGYTHEGEFILVAEDGANDLKNYPVNLVNGKIWVNNHAH
                     VLQGKKSIADNKFLAFSINQTNIESLLVGGGRAKLNSDVLMNIELKLPSPAEQEAIGT
                     FFSTLDQHITLHQRKLDKLKSVKQAYLSEMFPAEGERVPKRRFPGFTDDWELRKLGEV
                     AISFDYGLNSAATEYDGENKYLRITDIDDDSREFNISDLT"
     gene            complement(899..3466)
                     /locus_tag="AC1PJC_001105"
     CDS             complement(899..3466)
                     /locus_tag="AC1PJC_001105"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003136483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009007 - site-specific
                     DNA-methyltransferase (adenine-specific) activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HIP6620097.1"
                     /translation="MITSEEIKLRLWNGANELRGSMDASRYKDYMLGLMFYKFLSDQT
                     LKTYANLSGVSKESDWYQEYILAHQEYGTELEKMIQDVLGYFVRPEHLYQTWVKDMNE
                     GRFEVQKVTDSLSQFERSIAVANGSDDFQGLFASSTLDLTDTALGSNLNERSKNIQAL
                     IRLFEDLDMVALQNGDVLGDAYEYLIGQFAMESGKKAGEFYTPHQVSEVMAQIVATNS
                     SISSIYDPTVGSGSLLLTVKKHLSEDRQRSLNYYGQEKNTATYNLTRMNLLLHGVRPE
                     KMSIKNGDTLSQDWPEDPERPNEGVQFDAVVMNPPYSVKNWNRSGLKPSDPRFEIAGV
                     LPPDSKGDFAFLLHGLYHLGTQGTMAIVLPHGVLFRGAAEGEIRKRLLEKNQIDAVIG
                     LPSNLFTNTGIPVCIIILKKNRDLNEPVLFIDASRNFIKAGKQNALQEKDIAKIVDVY
                     TNRTEVDGYSHLASRQELIQNDYNMNIPRYVTALDEEIPHDVDAHLYGGIPKKNIDSL
                     SVLNQSVKEVLDNAFSENRPGYLTLNQTLEEFSRAVLSSPVVRAEYEQVQSTIAAFIE
                     EYWTKLHRLQTETNTRLLKEEMLADIKKRLSQFDQIDIYEGYQIIAEIWTKTLTHDAE
                     LIEQLGFYEAGRTREPNMVAKGKNKEKVQDGWNGVIIPNSLIASECYGDELAYIESLK
                     NRISEIDSEVSELVENAKVEDSEEYNALFDVLKKNEDGEALDSFEGKLVKATLKEAVK
                     GSTEFGFLKQVDDLAKEKSTVAKDIKTKEQELKELVSNRIQVLTDEEVDQLLYKKWFG
                     HVTDKALELVELPLKAEIAIIEELHNRYAETLDDMDAEIALLETELENLMKELVVLS"
     gene            3957..4775
                     /locus_tag="AC1PJC_001106"
     CDS             3957..4775
                     /locus_tag="AC1PJC_001106"
                     /inference="COORDINATES: protein motif:HMM:NF040365.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6261 family protein"
                     /protein_id="HIP6620098.1"
                     /translation="MTAKKENHSTSNTSTQISKVKPLPLQKLDNINFYQLNSRSLKSL
                     QQSQIPYSQDNHLTLAIDKWQVSFNQYQKAINQDKGKELTKKIQEANQLRNSDFSIFK
                     RSLAAFETSKRQTEKSAYTELTQIVKPFRDIHRLDYEKESLEMDKLFNRLSSPEAIEH
                     IEILGLKRFFENLKESQQEFETVFSHTTDIRSKANRYDTYQIRKDLQSAYLRVLKLCE
                     ILTELHGQSLYSELVTLFNTSRQYYIEQLSHHSNKVAKNDKNIILQLPEPLLQP"
     gene            complement(4959..5393)
                     /locus_tag="AC1PJC_001107"
     CDS             complement(4959..5393)
                     /locus_tag="AC1PJC_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018372281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family protein"
                     /protein_id="HIP6620099.1"
                     /translation="MDLNKYVQEVSLQDFGKEFRHVAIWNRRLRSTGGRFFPRDGHLD
                     FNPKHLEEQGLEVFRKIVRHELCHYHLYFEKKGYRHGDRDFKELLAAVDGLRYAPKLE
                     QTAKPSLLYTCQSCGQVYQRKRRIDLKKYRCGKCRGLLEKIL"
     gene            complement(5380..7536)
                     /locus_tag="AC1PJC_001108"
     CDS             complement(5380..7536)
                     /locus_tag="AC1PJC_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003729 - mRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tex family protein"
                     /protein_id="HIP6620100.1"
                     /translation="MEEKYLKIAQELSVSLKQIDTVLSLTAEGNTIPFIARYRKDVTG
                     NLDEVVIKSIIDRDKALTALADRKATVLAKIEEQGKLTDQLRQAIEEAEKLADVEELY
                     LPYKEKRRTKATVAREAGLFPLARLILQNVADLEEQAASFICEGFDTAQACLAGAVDI
                     LVEAISEDNKLRAWVYHEVQTNSSLTSELKDQEADEKEVFQIYYDFSEKVAKMQGYKT
                     LAINRGEKLGVLKVTFEHNVDKMVRFFELRFPQSNSYIKDVIQQAIKKKILPAMERRI
                     RTELTEEAEEGAIQLFSKNLRNLLLVSPLKGKIVLGFDPAFRTGAKLAVVDQTGKLLT
                     TQVIYPVEPAGQRQIAQAKKDLADLIGQYQVEIIAIGNGTASRESEAFVADLLKDFPE
                     VSYVIVNESGASVYSASELARYEFPDLPVEKRSAISIARRLQDPLAELVKIDPKSIGV
                     GQYQHDVNQKSLSESLDFVVDTVVNQVGVNVNTASPALLAHVAGLNKTISENIVKYRE
                     ENGALTSRQQLKKVPRLGDKAFEQAAGFLRIPDATNFLDNTGVHPESYKAVENLLELL
                     AIDHLDEAAQEKLKQVAIADTAEKIGVGQETLKDIIADLLKPGRDLRDDFEAPVLRQD
                     VLDVKDLVVGQELQGTVRNIVDFGAFVDIGVHEDGLVHISRMVKRKRDKNGRQQALPH
                     PSEVLAVGEIVTVWVVEVDIKRNRIGLSLLKPNGSE"
     gene            complement(7618..8460)
                     /locus_tag="AC1PJC_001109"
     CDS             complement(7618..8460)
                     /locus_tag="AC1PJC_001109"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HIP6620101.1"
                     /translation="MTRYTFSNGVTVPKIGFGTWQIPDGEVAYGAVSYALEAGYRHID
                     TAQIYGNEASVGRAIADSGLAREDIFLTTKVWNDKIGYEDTLASVEESMQKLQVDYLD
                     LLLIHWPNPKAIRDSIGWKERNAQVWKALEELYRAGKVKVIGVSNFMEHHLEALLETA
                     EIIPMANQIMLAPGTPQSELVAYCKAKGILLEAYSPFGTGSLFQSQEAADLAKEAGCS
                     VAQLALAWSLDKGFLPLPKSTSPENIKANLEIDGLAISPTAVAKLDKLEGVKGRLDPD
                     QAEF"
     gene            complement(8576..9091)
                     /locus_tag="AC1PJC_001110"
     CDS             complement(8576..9091)
                     /locus_tag="AC1PJC_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="QueT transporter family protein"
                     /protein_id="HIP6620102.1"
                     /translation="MNTSKWTARDMAEIALVAAIYVALTLTPPLNAISFGAVQFRLSE
                     MLNFLAFYNRKYIIAVTIGCMISNLIGFGVIDLFVGGFSTLIFVTLGVILFEKYKKDY
                     LFGGLFNKAFFYFSFFFAATMFTIALELKVLYDLPFFLTWLTTAAGELLSLLVGAVVI
                     DKLSKKINFEK"
     regulatory      complement(9089..9191)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:15.0:RF01054"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="PreQ1 riboswitch class II; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF01054"
     gene            9220..9657
                     /locus_tag="AC1PJC_001111"
     CDS             9220..9657
                     /locus_tag="AC1PJC_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HIP6620103.1"
                     /translation="MKKLFYQLINNEVILYLIAGVAATLVYMVTRMGLFLFIPSILLV
                     TLLANAVAILFAFWTNDRFVFKQAREGWSQRLVKFVSARIATLVMDMALAYLLVQAYP
                     QLIGQFVNHDLTLVNAISTLFSQVLVIVVNYFLSKLFIFKNTK"
     gene            complement(9704..10627)
                     /locus_tag="AC1PJC_001112"
     CDS             complement(9704..10627)
                     /locus_tag="AC1PJC_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HIP6620104.1"
                     /translation="MKKTRIVEGLKTFCSTFFSFYRSADSDVTSVAVAYYLLISIFPI
                     LLTLANLLPYYPFDVDMILSVVAEFVPDKLYPSVSSFITSVLTKPSSSWLGISILTTL
                     WTLSRSMTILQKAFNKAYGINEHRDFIIGHLIGIFLGIGLQVIILLSITFLTFGQAVF
                     SYINKLVPIEDAWLKGLLSQTQLVGLMALFAALVMLYFFLPNVRIKKVRYVFPGTLFV
                     LLTMTSIGKLFSIYVDNYANKLLDFRIVTAVVFLVFMLWFIFMAQVLIIGAMINATVQ
                     SMQVEEFHARDGDIVSILNRLKARFTAIDKE"
     gene            complement(10675..11535)
                     /locus_tag="AC1PJC_001113"
     CDS             complement(10675..11535)
                     /locus_tag="AC1PJC_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013903404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl aminopeptidase"
                     /protein_id="HIP6620105.1"
                     /translation="MITIKSQREIDAMNRAGDVLAGIHIGLREIIKPGVDMWEVEEYV
                     RKTCKEKNVLPLQIGVDGELMDYPYATCCGLNDEVAHAFPRHYKLKEGDLLKVDMVLS
                     EPLDKAVVDVSKLNFNDVKAMKKITQTYRGGCADSCWAYAVGQVSEEVQNLMDVTKEC
                     LYRGIEQAVVGNRIGDIGAAIQEYAEGLGYGVVRDLVGHGVGPTFHEEPMVPHYGTKG
                     RGLRLREGMVLTIEPMINTGTWEIDTDMKTGWAHKTLDGGLSCQYEHQFVITKDGPVI
                     LTSQGEEGTY"
     gene            complement(11532..12104)
                     /locus_tag="AC1PJC_001114"
     CDS             complement(11532..12104)
                     /locus_tag="AC1PJC_001114"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIP6620106.1"
                     /translation="MTLWTRLAKFAYFETDRLYLRPFSFEDGESFYEIVSNPENLPFI
                     FPALEDRNIAFSTMVEKFMRSPLGNWALVDKYSERMIGALCFEKVDERQLSAELSYFL
                     KKDYWRRGLMTEAVRTLVYLAFYEFGLRELVIVTHEENVASQMVAKKAGLVQVAQYRG
                     SDRYSHKTRNYLTFSLKRAEFSLEMYEENE"
     gene            complement(12199..13458)
                     /locus_tag="AC1PJC_001115"
     CDS             complement(12199..13458)
                     /locus_tag="AC1PJC_001115"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001226236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0019277 - UDP-N-acetylgalactosamine
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HIP6620107.1"
                     /translation="MRKIVINGGKTLKGSVTVSGAKNSVVALIPAIILADGIVTLDGV
                     PAISDVDSLVDIMETMGATVKRDGETLEIDPRGVKDMPMPFGKINSLRASYYFYGSLL
                     GRFGQAVVGLPGGCDLGPRPIDLHLKAFAAMGAETTYEGDYMRLATNGQRIQGAHIFM
                     DVVSVGATINTILAAVKAEGRTVIENAAREPEIIDVATLLNNMGARIRGAGTDIITIE
                     GVDSLKGTRHQVIPDRIEAGTYIALAAAVGEGIRIDNVLYEHLESYIAKLEEMGVRMT
                     ISEDSIFVEKQEKLKAVSVKTSPYPGFATDLQQPITPLLLKAEGTGTIVDTIYEKRVG
                     HVQELANLGAKISTRNNHIAFEGPNQLTGTSVKATDLRAGAAMVIAGLMAQGRTEITN
                     IEFILRGYSNIIEKLTELGADIQLIED"
     gene            complement(13609..14220)
                     /locus_tag="AC1PJC_001116"
     CDS             complement(13609..14220)
                     /locus_tag="AC1PJC_001116"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008753 - NADPH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HIP6620108.1"
                     /translation="MKALIVFAHPRKESFTHALVDRVAEALLENGAEVVIRDLYEIGF
                     DPVLRGEDTIHIEDGKFVRQATVFPADVQVEMDLIAESDLLVYIFPSWWNGMPAIMKG
                     YVDRVFQHGFAYSFESDEPRKLFSTKKAIFFTPTGQPQNADGSLTPIDQAMKSLTSEW
                     LFNSNGAQVIDHIFYGRVPYLTREELELYLVDAREQIQRIFHK"
     gene            complement(14251..15441)
                     /gene="metK"
                     /locus_tag="AC1PJC_001117"
     CDS             complement(14251..15441)
                     /gene="metK"
                     /locus_tag="AC1PJC_001117"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HIP6620109.1"
                     /translation="MSERKLFTSESVSEGHPDKIADQISDAILDAILAEDPDAHVAAE
                     TAVYTGSVHVFGEISTTAYVDINRVVRDTIAEIGYTKGEYGFSAESVGVHPSLVEQSP
                     DIAQGVNEALETRQDASQDPLDLIGAGDQGLMFGFAVDETPELMPLPISLSHKLVRRL
                     AELRKSGEIAYLRPDAKSQVTVEYDEDNQPVRVDTVVISTQHDPEVSQEQIRQDVIER
                     VIKEIIPAHYLDDQTNYFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFS
                     GKDATKVDRSASYAARYIAKNIVAAGLAKKAEVQLAYAIGVAHPVSVRIDTFGTSTVA
                     ESKLEAAVRQIFDLRPAGIIQMLDLKRPIYKQTAAYGHMGRTDIDLPWEKLDKVEALK
                     TAVL"
     gene            complement(15876..16343)
                     /locus_tag="AC1PJC_001118"
     CDS             complement(15876..16343)
                     /locus_tag="AC1PJC_001118"
                     /EC_number="3.5.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000138511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004132 - dCMP deaminase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006220 - pyrimidine nucleotide metabolic
                     process [Evidence IEA];
                     GO_process: GO:0009972 - cytidine deamination [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxycytidylate deaminase"
                     /protein_id="HIP6620110.1"
                     /translation="MSTNRLAWDEYFAAQALLIANRATCKRAKVGAVLVKDNKVIATG
                     YNGSVSGTEHCLDQECLMIDGHCARTLHAEVNAILQGAERGIPKGFTAYVTHFPCLNC
                     SKQLLQVGCKRVVYINEYRMDDYAQYLYKEKGCELVHLPLEVVKQAIAEAEFI"
     gene            complement(16362..17099)
                     /locus_tag="AC1PJC_001119"
     CDS             complement(16362..17099)
                     /locus_tag="AC1PJC_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620111.1"
                     /translation="MNETRFLELFNDLDKVLRKVCGVADGEYADVGSMLTKAKELTRH
                     NPVEANWDKLYVARQLRNLMVHEKRTGLKEVAQPSQELITVLEKVIAQYQEPITIADY
                     LQKTQKIKPVIFEGKDKLIKALEIVEQEHFSKFPIFSDKVYQGLVSDKGLTNWLAKAS
                     KETGSIREKLVEASLEDVLACEEDSIQVIVLPITAHLYQVINHFEGRKRTTVLVSRQA
                     SGKLHSPEDLVGIVTAQDLAEIYGMVD"
     gene            complement(17101..18135)
                     /locus_tag="AC1PJC_001120"
     CDS             complement(17101..18135)
                     /locus_tag="AC1PJC_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HIP6620112.1"
                     /translation="MKTLDYIVTLTNTPSPTGFTTDIMNYIKAEVESFGYAASKTAKG
                     GVLVTVPGENDQEHRMVTAHLDTLGAMVRAVKPDGRLKMDLVGGFGYPSIEGENCLIH
                     CAKNGKTFTGTILMHQTSVHVYRDASTAERNQTNMEIRLDEKVTNADETRALGIEVGD
                     FISFDPRTVVTETGFIKSRHLDDKVSAAILLHLLKVYKEEGATMPYTTHFYFSNNEEI
                     GYGANSSIPAQVVEYLAVDMGAMGDDQQTDEYTVSICVKDGSGPYHYELRQRLVALAE
                     RDGIPYKLDIYPYYGSDASAAMRAGADVKHALLGAGIESSHSYERTHLDSVVATEQMV
                     DAYLKSAMVD"
     gene            18200..19156
                     /gene="birA"
                     /locus_tag="AC1PJC_001121"
     CDS             18200..19156
                     /gene="birA"
                     /locus_tag="AC1PJC_001121"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/biotin operon repressor BirA"
                     /protein_id="HIP6620113.1"
                     /translation="MKTYQKIYLLLKEREDYVSGEDLAQELGISRTSIWKAIRQLETH
                     GLTIEAARNRGYRLAEGDLLLPELISQELQLPVHLNMDSDSTQLDAKQGIESGHTSPA
                     LYLAPYQNKAKGRFGRSFYASKSGGIYMSLRLSPNVPFLEFKPYTILAAAAVVKAIQS
                     LCDLDVQIKWVNDIYLGHKKVAGILTEAISSMENQRVTDVIIGVGINVRIDDFPKELQ
                     QSAGNLFEEQPPFTRNQLITAIWKAFLETDEKELIALYKEKSLVVGQQVSFVENQVEF
                     KGTAIAVTDTGNLVIQLDNGKAKIISSGEISLTSWSASPPNE"
     gene            complement(19122..>19288)
                     /locus_tag="AC1PJC_001122"
     CDS             complement(19122..>19288)
                     /locus_tag="AC1PJC_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3272 family protein"
                     /protein_id="HIP6620114.1"
                     /translation="LAITTILAVYFMNASILTGDFLIAGIYAFIAYRNLHFAYKVTKF
                     IRLVEKQTKK"
BASE COUNT         5711 a         4604 c         3502 g         5471 t
ORIGIN      
        1 agttaagtca ctaatattga actctctgct atcatcatct atatcagtaa ttcttaaata
       61 tttattttca ccatcatact cagttgctgc cgaatttaaa ccatagtcaa acgaaatcgc
      121 cacctccccc aacttccgca gttcccaatc gtcagtaaat ccaggaaaac ggcgttttgg
      181 cacacgctct ccttcagcgg ggaacatttc gctcagatat gcttgtttta cactctttaa
      241 tttgtcaagc ttacgctgat gaagggtgat gtgttggtcc agggtggaga agaaagtgcc
      301 gatggcttct tgttcagctg gactaggtag ctttaactca atattcatta ggacatccga
      361 atttaacttg gctctaccac cgccaactaa caaagactct atgttagttt ggtttattga
      421 gaatgccaaa aacttattat ctgcaatgct cttttttcct tgcaacacat gtgcatggtt
      481 gttcacccaa atcttaccat ttactaagtt tacaggatag ttctttaaat cattggctcc
      541 atcttcagca accaagataa actccccctc atgtgtatac ccctcaacat aatcttggat
      601 accatttgct ccatagtaag gggtactgcc tgaaactctc aaactagaag caataggaac
      661 tcttaagtta tcaaatctat ctgcaatttc aaaaatcttc cgcagttccc aagcatctgc
      721 attttcaaac gctttgaagc ggcgtttggg gatattttta tctttgttcg gcatttctat
      781 aatcccccaa cttctatcga tttttcttcc cttttcggaa aatgaccgaa aaggattgct
      841 ggtgattttc tgttactgtt tctaaacggt ctttgtaaga aaatttctgt cgcatttatc
      901 atgataacac caccagttct ttcatcagat tttcaagttc tgtttcaagc agagcgattt
      961 ctgcatccat atcgtccaag gtttcagcat agcgattgtg aagttcttcg ataatggcaa
     1021 tttctgcctt taatggcaat tcaaccagtt caagtgcctt atcagtcaca tgaccaaacc
     1081 attttttata gaggagttgg tcgacttctt catctgtcaa gacttggata cgattggaca
     1141 ccagttcctt gagttcctgc tccttggtct tgatgtcctt agctactgtc gatttttcct
     1201 tggctaggtc atctacctgt ttcaagaagc caaattctgt agagcctttt actgcttctt
     1261 tcagagtagc cttgaccaat ttgccttcaa aactatccag tgcttcgccg tcttcattct
     1321 ttttcaagac atcaaagagg gcattatact cttcgctatc ttccaccttg gcattttcaa
     1381 ccaattcact gacttcactg tcaatttccg aaatccgatt tttcaagctt tcaatatagg
     1441 caagctcatc accgtagcac tcactagcaa tcaggctatt tgggataatc accccattcc
     1501 agccatcttg aaccttctcc ttattcttcc ctttcgccac catattgggc tcacgggtac
     1561 gcccagcctc ataaaagcct aattgctcaa tcaactctgc atcatgggtc agggtcttgg
     1621 tccaaatttc tgcgatgatt tgatagcctt cgtagatatc aatttggtca aactgggaca
     1681 agcgtttctt aatgtctgcc aacatttctt ctttcaataa tcttgtatta gtttcagttt
     1741 gtaaacgatg caattttgtc caatattctt cgataaaggc cgcaatagtt gactggactt
     1801 gttcatattc tgcccgaaca actgggctgg ataagactgc tcttgaaaac tcttcaaggg
     1861 tctgattcaa agttaagtag cctggacggt tttcactaaa ggcattgtcc aaaacctctt
     1921 tgactgactg attgagtaca gacagggaat ctatattttt ctttggaata ccaccatata
     1981 gatgagcatc cacatcatga ggaatttctt catccagagc agtcacatag cgtggaatat
     2041 tcatgttgta gtcattttgg atcaattcct gacgacttgc caaatgactg tagccatcta
     2101 cttccgttct gttcgtatag acatccacaa tctttgcgat gtccttttct tgcaaggcat
     2161 tttgtttacc tgccttgata aagttgcgcg aggcatcgat aaagagtaca ggctcattca
     2221 aatcccgatt tttcttgagg atgatgatac aaactggaat accagtgttg gtaaagaggt
     2281 tgcttggcag accgataaca gcatcgatct gatttttttc caaaagacgc ttgcggattt
     2341 cgccctcagc tgctccgcgg aagagaacac catgtggtaa gacaatggcc atggttcctt
     2401 gcgttcccag atgatagagg ccgtgtaaaa ggaaggcaaa gtcgcctttt gagtcagggg
     2461 gaagaacacc agcgatttca aaacgtgggt cgctcggttt caagcctgaa cgattccaat
     2521 tttttacaga atatggtggg ttcatgacca ccgcatcaaa ttggacacct tcatttggac
     2581 gttctggatc ttctggccag tcttgcgata gggtatcacc atttttaata ctcatctttt
     2641 ccggacgaac gccgtgaagc aagaggttca tgcgggtcag gttataggtt gccgtgttct
     2701 tttcctgacc atagtagtta agacttctct gcctatcttc cgataggtgt tttttgaccg
     2761 tcaaaaggag agaaccagag ccaacggttg ggtcatagat ggatgaaata gaagaattgg
     2821 tcgcaacaat ctgagccatg acttcgctga cttggtgggg cgtgtagaac tcgccagcct
     2881 tcttaccaga ttccatggca aattgtccaa tcaggtattc ataagcatct cccaagacat
     2941 ctccattttg cagggcaacc atatccaaat cctcgaacaa acggatgagg gcttgaatat
     3001 ttttactgcg ttcattgaga ttgcttccca gtgctgtatc tgtcaagtca agggttgagc
     3061 tggcaaatag gccttgaaaa tcatccgaac cattagcaac agcgatgctc cgctcaaact
     3121 ggctcaagct atccgttact ttttggactt caaacctacc ctcattcata tccttgaccc
     3181 aagtttgata gaggtgctca ggacggacga agtagcctaa aacatcctga atcatctttt
     3241 ccaattccgt accgtattct tggtgggcaa ggatgtactc ttgataccaa tctgactctt
     3301 tggatactcc agacaaatta gcataagttt ttaaggtctg gtcacttaaa aacttgtaga
     3361 acatgagccc aagcatataa tctttgtacc gactagcatc catagagcca cggagttcat
     3421 tggcaccatt ccatagacgt aatttaatct cttcagaagt aatcatgatt tctcctcgtg
     3481 tttgttttcc tcacttacgc ctagtaatag cgtaagagct ttctataaaa ttataccacg
     3541 atacaaaata aaattcttta tttatcttga ataatatact gactttgctt gttatttttc
     3601 atgcttcaaa aaatctttca atcagctaac aaactacaaa tcagccgact aatccatcga
     3661 ctgaaagctc acaagcaaaa cttctttaga cttattatct tgtgattaca ataaaataaa
     3721 aaaaatacta cctagcttca taattttaat acgacaagga ttaaaaccaa caaccaatca
     3781 gtaggatggg gacctgcata ggagaaatat accgacctat aagttcattt ctaattatct
     3841 ggcagtaaaa acggcactta attacttcca tgttcatttt cgggacaaaa atgtcctgtt
     3901 gaaaagatag gataattgct atcatagtac catcacataa gaaatgagga tagctgatga
     3961 cagcaaaaaa ggaaaatcac tctacatcaa acacaagcac acaaataagt aaagtgaaac
     4021 cattaccact gcaaaagttg gacaatatca acttctacca acttaattct cgcagtctaa
     4081 aatcattaca acaaagtcaa ataccttaca gtcaggacaa ccatttgact cttgcaatag
     4141 ataagtggca agtgtccttc aaccaatacc aaaaagctat caatcaagat aagggcaaag
     4201 aattaacaaa aaagattcaa gaagccaacc aacttcgtaa tagcgacttt tctattttca
     4261 aacgtagtct agctgccttc gaaacgagta aacgacaaac agaaaaatcc gcttataccg
     4321 aattaacaca gattgtaaaa cctttccgag acatacatag acttgattat gaaaaagaaa
     4381 gccttgaaat ggacaaacta tttaatcgtt tatccagtcc agaagcaatt gaacatatcg
     4441 aaatccttgg tttaaaaaga ttttttgaga acctaaaaga aagtcagcag gaatttgaaa
     4501 cagttttctc acataccact gacatccgta gtaaagctaa tcgctatgat acctatcaaa
     4561 tccgtaaaga tctccagtct gcttatctcc gtgttttaaa actctgcgaa atcctgacgg
     4621 aactccatgg ccagtctctc tactccgaac tcgttacact tttcaatact agtagacaat
     4681 actacatcga acaactttca caccattcaa ataaagttgc caaaaatgat aaaaatatca
     4741 ttttacaact cccagaaccg ctccttcaac cctaatcctt tttacaaaat aatcccaata
     4801 ccttatactc aatgaaaatc aaaatcagac taggcgacgc agatgcagat agaactgaag
     4861 ttcatcaaat caagtcaaca acgtctgatt ttgattttcg aagagtatta tcacaaaaac
     4921 cagccctaag ttaatctctt aggactgttt ttcttgtatt aaagtatttt ctctaaaagc
     4981 cccctacact tcccacatcg gtattttttt aggtcaatgc ggcgcttgcg ctggtagact
     5041 tgtccacagg actgacaggt atacagcaag cttggcttgg cagtttgttc tagtttggga
     5101 gcatagcgca ggccgtccac cgcagccaac aattccttga aatccctgtc tccgtgccga
     5161 tagcctttct tctcaaagta gagatggtag tggcagagct cgtggcggac aatcttccga
     5221 aagacttcta aaccttgctc ctccaaatgc ttgggattga aatccaaatg cccatccctt
     5281 ggaaaaaagc gaccacctgt tgagcgtaat cgcctgttcc agattgctac atgccgaaat
     5341 tccttaccga agtcttgcaa ggagacttct tgcacatact tattcagatc catttggttt
     5401 caaaaggcta agaccgatac gattgcgttt gatgtccact tcgaccaccc agacggttac
     5461 gatttcccca actgcaagaa cttcacttgg atgcggtaag gcttgttggc gtccattttt
     5521 atctcgtttg cgtttgacca tgcgtgaaat gtggaccaga ccatcctcgt ggacaccgat
     5581 gtccacaaag gctccaaagt ccacaatatt gcggaccgta ccttgcaatt cctgtccgac
     5641 taccaagtcc ttgacatcca agacatcttg acgaaggact ggtgcttcaa agtcatcccg
     5701 taaatcacga ccaggtttga gcaagtctgc gatgatgtcc ttcaaggttt cttgaccgac
     5761 accgattttt tctgccgtat ccgcgatagc cacctgcttt aatttttcct gcgcagcctc
     5821 atctaagtgg tcaatagcta gaagttctaa caggttttcc acagccttgt aagactcggg
     5881 gtgcacgcca gtattgtcca aaaaattagt cgcatcagga attcgcaaga aaccagctgc
     5941 ctgctcaaag gccttgtcac ccagacgagg caccttttta agttgctgac gagaggtcag
     6001 agcaccattt tcctcgcggt acttgacgat gttctccgaa atggtcttgt taagaccagc
     6061 aacgtgagcc aaaagggcag gactggccgt attgacattg acaccgacct ggttgaccac
     6121 cgtatcgacc acaaaatcca gactttcaga cagagatttc tggttgacat cgtgctggta
     6181 ctggccgaca ccgattgact tgggatcgat tttgaccagc tcagccagag ggtcttgcag
     6241 acggcgggcg atggaaatgg cagagcgttt ttccacaggg aggtctggga actcgtatcg
     6301 cgccagttca gaagctgagt agacggaagc tccgctttca ttgacgatga cgtaagaaac
     6361 ttctgggaaa tccttgagca aatcagcgac gaaagcttca gattcacggc tggccgttcc
     6421 atttccgata gcaatgattt ccacttggta ttgcccaatc aggtctgcca agtctttctt
     6481 ggcctgagca atttgtcgct gaccagccgg ctccacagga tagatgactt gtgtagtcaa
     6541 gagttttccc gtctgatcta ccactgctag cttggcccct gtccgaaagg cagggtcaaa
     6601 accaaggaca atcttgcctt ttagaggaga tacaaggagc agatttcgta ggtttttaga
     6661 gaagagctgg atagctcctt cttctgcttc ttccgtcaat tctgtccgaa tacgacgctc
     6721 catggcaggt agaattttct tcttaatagc ctgctggatc acatccttga tgtagctatt
     6781 agactgtgga aaacgcagtt caaagaaacg aaccatttta tccacattgt gttcaaaagt
     6841 aaccttgaga acacctaatt tctcaccacg gttaatggcc aaagtcttat aaccctgcat
     6901 ttttgccact ttctcagaaa aatcatagta aatctgaaag acttcttttt catctgcttc
     6961 ttgatctttt agctctgaag tcaggcttga attggtctgt acttcatggt agacccaggc
     7021 ccgaagctta ttgtcttctg agatagcttc gaccaaaata tccacagccc cagccaaaca
     7081 agcctgagca gtatcaaaac cttcacagat gaaactagca gcctgttctt ccaagtcagc
     7141 cacattctgc aaaattagac gagccagcgg gaacagtcca gcctcacgcg ccaccgttgc
     7201 cttggtccga cgtttttcct tataaggcag gtagagttct tccacatctg ccaacttttc
     7261 cgcttcctcg atagcctgac ggagctggtc tgtcaatttt ccttgttctt caatcttggc
     7321 aaggacagta gccttacgat cagcgagagc agtcaaggcc ttatcccgat caatgataga
     7381 cttgatgacc acctcgtcca agttccccgt cacatccttc cgataacgag cgataaaggg
     7441 aatggtgttt ccttcagccg tcaaagagag aaccgtatca atctgtttta aactaacgct
     7501 caattcctga gcaattttca aatatttttc ttccatagct actattatag catgaaagcg
     7561 gtacaaatga ctcaatagaa aaagcacgta gataaactac atgctctcaa tagctaatta
     7621 aaattcagcc tgatccgggt caagtcgacc ttttactcct tctagtttat ccaactttgc
     7681 aactgctgtc ggactaatag ccaagccatc aatttccaaa ttcgccttaa tattttctgg
     7741 actagttgat ttcgggagag ggagaaagcc tttatctaaa gaccaagcta gtgccagctg
     7801 agcaacacta caaccagctt ctttagccaa atcggctgct tcttggcttt ggaaaaggct
     7861 tcctgtacca aatgggctat aggcctccaa gagaatccct ttggctttgc agtaagcaac
     7921 taattctgac tgaggagttc ctggagctaa cataatctga ttagccatcg ggataatctc
     7981 agccgtttcc agcaaagctt ctagatgatg ttccataaag ttagaaactc caattacttt
     8041 cacttttcca gcacgataga gctcttctaa tgccttccaa acctgggcat tgcgttcctt
     8101 ccagccaatg ctgtcgcgaa tagcctttgg atttggccaa tggatcagta acaaatccag
     8161 ataatccacc tgaagttttt gcatggattc ttctactgaa gcaagggtat cttcatagcc
     8221 aatcttatca ttccaaacct tagttgttaa aaaaatgtcc tcacgagcta gaccactatc
     8281 agctatagct cgaccaacac tagcttcatt gccataaatt tgagcagtat caatatgacg
     8341 ataaccagct tccaatgcat aagaaaccgc accgtacgcc acttcaccat caggtatctg
     8401 ccaagttcca aaaccaattt taggaacagt tactccattt gaaaacgtat atcttgtcat
     8461 aaaagacctc ctatttcttc tatccccagt ataaactaaa ttgtcaatca atacaaaata
     8521 atgcgaccta aaaataaaag acacccgaaa gtgtctgctc acatttattg tatacttact
     8581 tttcaaaatt tattttcttg gatagtttat cgataacaac agctccaact aatagagaaa
     8641 gcaattctcc tgctgctgtt gtcaaccaag ttagaaagaa tggcaaatca tataagactt
     8701 ttaattctaa agcaatggta aacatagttg ccgcaaaaaa gaatgagaaa taaaagaaag
     8761 ccttgttaaa taatccaccg aatagatagt ccttcttgta tttttcaaac aggataactc
     8821 ccaacgtaac gaagattaat gtcgagaatc cacccacaaa gaggtcaatc acgccaaaac
     8881 caatcaagtt ggaaatcatg caaccaatgg tcacagcgat aatatactta cgattataaa
     8941 aagccaagaa attgagcatt tcagacaaac gaaactgaac agccccgaag gaaatagcat
     9001 tcaatggcgg tgtcaaggta agagcgacat aaatcgccgc aacaagagca atttctgcca
     9061 tatctctggc agtccattta gatgtattca taaaattctc ctttagcaaa aaagcttaaa
     9121 atatgcttgg gtaaagtgag caagtcccaa gggtcattga atttgtcaac aacgttgatt
     9181 agtatagcat atttttgcta aaaatgatag actagtccta tgaaaaaact attttatcaa
     9241 ctcatcaata acgaagttat tctctatttg attgcaggtg tggcagcaac ccttgtctat
     9301 atggtcactc gaatggggct ctttctgttc atcccatcca ttctactagt aactctttta
     9361 gccaatgcag tagctatcct ctttgccttt tggactaacg accgtttcgt tttcaaacaa
     9421 gccagagagg gttggtctca gcgattggtc aagtttgtat ctgcccgcat cgcgaccttg
     9481 gtcatggata tggctctagc ctatttatta gtacaagcct acccacaatt gattgggcag
     9541 tttgtcaacc atgatttgac acttgtcaac gccatttcca ctctcttctc tcaagtcttg
     9601 gtcattgtgg tcaactattt cttgagcaaa ctctttatct ttaaaaatac gaaatgaggc
     9661 tccaacggaa cctcattttt atatatagct tgattttcct gcttcattct ttatctatcg
     9721 ctgtaaatct tgcctttagc ctattcaaga tagaaacaat atccccatct ctggcatgaa
     9781 actcttctac ctgcatactt tgaaccgtag cattaatcat tgcaccaatg atgagtacct
     9841 gagccataaa aatgaaccaa agcataaaaa caagaaagac gacagctgtt actattctaa
     9901 aatccagcaa cttattagca taattatcaa cataaatcga aaataacttt ccaatagaag
     9961 tcatcgtcaa tagaacaaac aacgttcctg gaaaaacata tcgaactttt tttattcgaa
    10021 catttggcaa aaagaaataa agcataacca aggcggcaaa cagagccatt aaacctacta
    10081 actgtgtttg actaagaagt cccttcagcc aggcgtcttc aataggaacc agcttattaa
    10141 tataagaaaa aactgcctgc ccgaaagtca aaaatgtaat acttaagagg ataattacct
    10201 gcagaccaat tcctaaaaat atgccaatca agtgcccaat aataaaatca cggtgttcat
    10261 tgatgccata agccttatta aaggccttct gcaaaatagt catactacgt gacagggtcc
    10321 aaagagttgt cagaattgaa atccctaacc atgatgacga cggctttgtt aatacagaag
    10381 taataaaaga tgaaaccgaa ggatagagct tgtctggcac aaattcagct acaaccgata
    10441 aaatcatatc cacatcaaat ggataatatg gcagtaaatt cgcgagagtt agaagaatag
    10501 ggaaaataga aattaacaaa tagtaggcta ctgcaacact tgttacatcg ctatcagcag
    10561 aacgataaaa agaaaagaag gttgagcaga atgttttcaa accttcaact attctggttt
    10621 tcttcattct ctcctccttc ctcattcatc tattattcac gaccacaccg agaattaata
    10681 ggtcccttct tcaccttgac tggtcaaaat aaccggtcca tctttggtga tgacaaattg
    10741 gtgttcgtat tgacaagaca aaccaccatc aagtgtctta tgagcccaac cagtcttcat
    10801 atccgtatca atttcccaag tccctgtatt aatcataggc tcgatagtca aaaccatgcc
    10861 ctcacgtaaa cggagtccac gacctttagt tccataatga ggaaccatcg gctcttcgtg
    10921 gaaagttggt ccaacgccgt gacccaccaa atcacgaaca acaccgtagc caagaccttc
    10981 tgcatattct tgaatggctg caccaatatc accgatacga ttaccaacaa ctgcttgctc
    11041 gataccgcgg tacaaacatt ccttagtcac gtccatcaag ttttgaactt cctcagagac
    11101 ctgaccaacc gcataagccc agcaggaatc cgcacaacca ccacgatagg tctgggtgat
    11161 tttcttcata gccttgacat cattaaagtt gagcttagaa acatcaacta ccgctttatc
    11221 caaaggctcg ctcaaaacca tatcgacctt cagtaaatca ccttctttaa gtttgtaatg
    11281 acgcggaaag gcatgagcga cctcgtcatt caatccacaa caagtcgcat aaggataatc
    11341 catcaattct ccatcaacac caatttggag tggcaaaaca ttcttttcct tacacgtttt
    11401 acggacatat tcctctactt cccacatgtc cacacctggc ttgataatct ctcgcaaacc
    11461 aatatgaata ccagccagaa catctccagc acggttcatt gcatcaattt ctcgttgtga
    11521 tttaatggta atcattcatt ctcctcatac atttctaaac taaattcagc cctcttcaag
    11581 ctaaatgtta gataatttct tgttttatgg ctatagcggt cacttccacg atactgcgca
    11641 acctgtacca aaccagcttt tttcgccacc atctgactag ccacattttc ctcatgggtg
    11701 acaataacca gctccctcag accaaactca taaaaagcta gataaactaa agtccgcact
    11761 gcttccgtca ttaagcctct tctccagtag tcttttttta ggaaatagct gagctccgca
    11821 gaaagttgac gttcatctac cttttcaaag caaagcgcac caatcatcct ctccgaatac
    11881 ttatcaacta aggcccagtt tcccaatggt gaacgcataa atttttcaac cattgtcgaa
    11941 aaagcaatat ttctgtcctc caaagctgga aagataaaag gaagattttc gggatttgat
    12001 acaatttcat agaaactttc tccatcttca aaagaaaatg gtcgtaaata caaacggtcc
    12061 gtttcaaagt aagcaaactt cgctagtctt gtccaaagtg tcatagtgta cccaaggggc
    12121 tgagaattac tcccagcccc agattgtttt gtttttaaat cgtttacgtt ttgagaaagt
    12181 agttctcaat tagactctct aatcctcaat caattgaata tctgcaccta attctgtcag
    12241 cttttcaata atatttgagt aaccacgtag aataaactca atgtttgtaa tttctgtacg
    12301 cccttgagcc attaaaccag caataaccat tgcagctcca gcacgcaaat cagtagcttt
    12361 aacagatgta ccagtcagtt gatttggacc ttcaaaggca atatggttgt tacgagtaga
    12421 gatttttgct ccaaggtttg caagctcctg cacatgacca acacgttttt cataaatcgt
    12481 atcaacaatc gtaccagtcc cttctgcctt aagcagtaaa ggtgtaatgg gttgctgcaa
    12541 gtctgtcgca aaacctggat aaggcgaagt tttcacactt accgccttca atttctcttg
    12601 cttttcaaca aaaatactat cttcagaaat ggtcatgcga acacccattt cttccaactt
    12661 agcgatgtaa ctctctaagt gttcataaag gacattatcg atacgaatac cttcaccaac
    12721 agcagcagca agggcaatat aagtccctgc ttcaatacgg tctggaatca cttgatgacg
    12781 tgttcctttt agactgtcta cgccttcaat ggtgataata tctgtacccg caccacggat
    12841 acgtgccccc atattattaa gcaaagttgc cacgtcaata atttcaggtt cacgcgccgc
    12901 attttcaata actgtacggc cttctgcttt gacagctgct aagatagtat taattgtcgc
    12961 accgacgctg acaacatcca tgaagatatg tgccccttga atacgctgac cattagttgc
    13021 caagcgcata tagtcacctt cataggttgt ctcagctccc attgccgcga atgctttcaa
    13081 gtgcaaatca atcggacgcg gtcccaaatc acaaccacct ggcaagccaa caacagcttg
    13141 accaaagcga ccaaggaggg aaccgtaaaa atagtaggat gcacgcaagc tattaatttt
    13201 gccaaatggc ataggcatgt cttttacacc acgagggtca atctccaagg tttcaccatc
    13261 acgcttgacc gtcgcgccca ttgtttccat aatatcaact aagctatcta catccgagat
    13321 tgcaggtact ccatccagag taacaatccc gtctgcaaga ataatggccg gaataagagc
    13381 aacaactgag ttttttgcac cactaacggt aaccgaccct ttcagtgttt ttccaccatt
    13441 aattacaatt tttctcatac taacattcac tttcttaatt tgcctaaaaa ggcatacgtt
    13501 tcattctatc ataaagtctt ggaaaaagct agttatatag catgcaaaag gaccgagcca
    13561 atgagctcag tccttcatat ttatatacta ttagtgaatc tctcttcatc atttatgaaa
    13621 aattctctga atttgctccc ttgcatccac gagatacaac tccagctctt ctctcgttaa
    13681 ataaggtact cgcccataga agatatggtc aatgacttga gcaccgttgc tattgaagag
    13741 ccattctgag gtcaggcttt tcatcgcttg atcaatcggt gtcagacttc catctgcatt
    13801 ttgtggctgc cctgttggcg taaagaaaat agctttctta gtggaaaata atttacgcgg
    13861 ttcatcagat tcaaaactgt aagcaaagcc atgttgaaat acacggtcta cgtaaccttt
    13921 cataatagca ggcattccat tccaccaact cggaaatata tagactagta agtcgctttc
    13981 ggcaatcaaa tccatttcaa cttgaacatc tgctggaaaa acagttgcct gacgtacaaa
    14041 tttaccatcc tcaatatgaa tggtgtcttc tccacgtaac acgggatcga atcctatttc
    14101 gtataaatct cggatgacaa cttccgctcc attttccagc agagcttccg ccactctatc
    14161 aactaaagca tgtgtaaagc tttcttttct agggtgtgca aagacaatta acgctttcat
    14221 aaacttctca ctaagtggac aactatttca ttacaaaacc gcagttttca aggcttccac
    14281 cttgtccaat ttctcccatg ggagatcaat atcggtacgt cccatatgac cataggctgc
    14341 agtttgcttg taaatcggac gtttgaggtc caacatttga ataataccag ctgggcgcaa
    14401 atcgaaaatc tgacgaacag ctgcttctag tttgctttcc gctactgtgc tcgtaccaaa
    14461 ggtatcgatg cgaactgaaa ctgggtgagc aacaccgata gcgtaagcca attgaacttc
    14521 cgccttttta gccaaaccag ctgcgacgat attttttgcg atgtagcgtg ccgcataaga
    14581 tgcagaacgg tccactttgg tcgcatcctt accagagaag gcaccgccgc catgacgaga
    14641 ataaccacca taggtatcaa cgataatctt acggcctgtc aaaccagagt ccccttgagg
    14701 tccgccaatg acaaagcgac cagttgggtt gataaagtag ttggtttggt catccagata
    14761 atgagctgga atgatttcct tgatcacacg ttcaatgaca tcctgacgaa tttgctcctg
    14821 gctaacttct ggatcatgct gggtcgaaat aacgactgta tccacacgaa caggttggtt
    14881 gtcttcatcg tattcaactg ttacctgtga cttagcatct ggacggagat aagcaatttc
    14941 accagatttt ctcaactcgg ccaaacgacg caccaatttg tgactaagtg aaattggcaa
    15001 gggcataagt tcaggcgttt catctactgc aaaaccaaac atgagcccct ggtcacctgc
    15061 accaatcaaa tccaatggat cttgactagc atcttgacga gtttccaagg cttcattgac
    15121 gccttgggca atatctggcg attgctctac aagtgatgga tgaaccccaa ccgactcagc
    15181 tgaaaaacca tactcacctt ttgtatagcc aatctccgca atcgtatcac gtaccacacg
    15241 gttaatatcc acataggcag tggttgaaat ctctccaaac acatgaacac tacctgtata
    15301 aacagccgtc tctgctgcta cgtgcgcatc tggatcctct gctaaaatag cgtccaaaat
    15361 ggcatctgaa atctggtctg caatcttatc cggatgaccc tccgaaacag attcagacgt
    15421 aaacaactta cgttctgaca taaaaatgtc ccccttaaaa tagaatatat gctagaaacc
    15481 tagcgggtta ctaaggttac aaagaactag tcgaagacta gttctttgcg aaagacacct
    15541 gtcttgagca aggaaatcct atttgcgaaa gacttttgtc ttaagcaaag gaaaatttcc
    15601 agatacccaa cgagaaagac aataccagac tgtatgaaat cagccttatt tgaagaaaat
    15661 ggtgactgaa gtgtagtaaa gtttttacgc ttactattca atattaccag cttctttaat
    15721 tgtgtttcaa gtgtttctgc aaatattaac tagtctataa actacctttt cgggacttaa
    15781 taacgtttct agtatagcat agattgaccg actatcctag cattttctta aaaataaaga
    15841 gggttgttct atacaaccac tcttctacaa aatcattaga taaattcggc ttctgcaatt
    15901 gcctgtttaa ccacctctag aggcaaatga accaactcac agcccttttc tttatacaag
    15961 tactgagcat agtcatccat gcggtattca ttgatataaa caacccgctt acaaccaacc
    16021 tgtaacaatt gcttggagca gttgagacat gggaaatggg tcacataggc agtaaaacct
    16081 tttggaattc cccgctccgc tccttgtaaa atggcattga cttccgcatg caaggttcta
    16141 gcgcaatgac catcaatcat aaggcattcc tgatccaaac aatgttcggt tcctgaaaca
    16201 gaaccattgt agcctgttgc gataacctta ttgtccttaa ccaaaaccgc accgaccttg
    16261 gctctcttac aggtcgcccg attggcaatc aaaagcgcct gagccgcaaa atactcatcc
    16321 caagctaaac gatttgttga catgatttct cctttctcca ctcaatccac catcccataa
    16381 atctctgcca agtcctgggc tgtgacaata ccaacaagat cctctggcga atgaagcttc
    16441 ccgcttgcct gacgactgac taggacggtt gtgcgcttac gcccctcaaa atgattaatt
    16501 acctgataaa gatgggctgt tattggtaga acaatcacct gaatactatc ttcctcacaa
    16561 gctagtacgt cttcaagact agcttccacc aatttttcac gtatagagcc cgtttccttg
    16621 cttgccttgg ccaaccaatt tgtcaatccc ttgtcagaaa ccaggccttg ataaaccttg
    16681 tcagaaaaaa taggaaactt agaaaaatgc tcttgctcca caatttctaa agcctttatc
    16741 aatttgtcct tgccctcaaa aataaccggc ttaattttct gggtcttttg caaatagtcg
    16801 gcaatggtaa tcggttcttg gtactgggct atcacttttt ccaaaacagt gatcaattcc
    16861 tgcgaaggtt gggctacttc cttcaaacct gttcgtttct catgaaccat gagattacgc
    16921 aactgacgag ccacatagag tttatcccag ttcgcctcaa cgggattatg tcgcgtcaat
    16981 tcctttgctt tggtcaacat agagcctaca tctgcatatt ccccatccgc aacaccgcac
    17041 accttacgca agaccttatc caagtcattg aataactcta aaaaacgggt ttcattcatc
    17101 ttaatctacc attgctgatt tcaaataggc atctaccatc tgctcagtcg caactacaga
    17161 atccaaatgc gtccgttcat aggaatggct agactcaata ccagccccca atagggcatg
    17221 cttaacatct gcacctgctc gcatagctgc cgaagcatcg gaaccatagt aaggataaat
    17281 atccagctta taaggaattc catctctttc agccaaggct accaagcgct gacgaagttc
    17341 ataatggtaa ggacctgagc cgtccttgac acagatagaa actgtgtatt cgtcagtttg
    17401 ctggtcatct cccattgccc ccatatccac cgccagatac tcaaccacct gagcaggaat
    17461 gctggagttg gcaccgtagc caatctcttc attgtttgaa aaatagaaat gtgtcgtata
    17521 aggcatggtc gctccctctt ccttatagac cttcaaaaga tgaagcaaga tagctgcgga
    17581 taccttatca tccaagtgac gactcttgat aaagccagtt tctgtcacga cggtacgagg
    17641 atcaaaggag ataaaatctc cgacttcaat acccaaggcc cgcgtctcgt ccgcattggt
    17701 cactttttcg tccaaacgaa tttccatatt ggtctgattg cgctcagcgg tactggcatc
    17761 ccgatagaca tggacagagg tctggtgcat gagaatggta cctgtgaaag tcttgccatt
    17821 tttagcgcaa tgaatcaaac aattttctcc ctcaatagaa gggtatccaa atcctcccac
    17881 caaatccatt ttgagtcggc catccggttt cactgcacga accatggccc ccagtgtgtc
    17941 cagatgagca gtcaccatgc ggtgttcctg gtcattttcc cccggaactg tcaccaaaac
    18001 accaccttta gcggtcttac tagcagcata gccaaaactt tcaacctctg ccttgatgta
    18061 attcataata tccgtcgtaa aaccagttgg cgacggagtg ttggtcaatg taacaatgta
    18121 atcaagtgtc ttcatgaaaa cctccttatt tgaaactatt atatcacgtt ttaggtgatt
    18181 tttttgctat aatgaaggta tgaaaaccta tcagaaaata tatctccttt taaaagagag
    18241 agaggattat gtcagcggag aagatttggc acaggaattg ggcatttcac ggacatccat
    18301 ttggaaggcc attcgccagt tagaaacaca tggtttaact attgaggctg cccgtaatcg
    18361 tggctacaga ttagccgaag gcgatttact cctacccgaa ttaatctctc aggaacttca
    18421 actacctgtc catctgaata tggatagcga ctccacccag ctagatgcca aacaaggtat
    18481 tgaatcaggt catactagtc ctgccctata tctagctccc tatcagaata aagccaaggg
    18541 acgatttggg agatcctttt atgcatccaa gtcaggtggc atttatatgt cgcttcgtct
    18601 ctctcccaat gttccttttc tagaatttaa gccctacacc attttagctg cagctgctgt
    18661 tgtgaaggcc attcaatctc tttgcgactt ggacgtccaa atcaagtggg tcaatgacat
    18721 ctatctcgga cacaaaaagg tcgctggcat cctcactgag gctatctctt ctatggaaaa
    18781 ccaacgggta accgatgtca ttatcggtgt cggcatcaat gttcgcatag acgatttccc
    18841 taaggaatta caacaatctg caggaaatct tttcgaggaa caaccaccat ttacccgcaa
    18901 tcaactcatt actgccatct ggaaagcctt cttagaaacc gatgagaagg aactaattgc
    18961 cctttacaaa gaaaaatcac ttgtcgttgg ccaacaagtg agctttgtag aaaatcaagt
    19021 tgaatttaag ggtactgcca tcgctgttac tgatacagga aacctggtta tccagttaga
    19081 taacggcaaa gcaaaaatta tctccagcgg agaaatcagc cttacttctt ggtctgcttc
    19141 tccaccaaac gaataaattt agtcaccttg taagcaaaat gaagattccg ataggcgata
    19201 aaggcgtaga tacctgcaat caagaaatct cctgtcaaaa tcgatgcatt cataaaataa
    19261 acagctaaaa tagttgtaat ggctaaaa
//
LOCUS       DBNFCX010000035        19054 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.035, whole genome shotgun sequence.
ACCESSION   DBNFCX010000035 DBNFCX010000000
VERSION     DBNFCX010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 19054)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19054)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19054
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.035"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(1..972)
                     /locus_tag="AC1PJC_001123"
     CDS             complement(1..972)
                     /locus_tag="AC1PJC_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti sigma factor C-terminal domain-containing
                     protein"
                     /protein_id="HIP6620115.1"
                     /translation="MNMKTFEEVTKKSKRKNLWKTIGLSSLIGFILMLIAVQTVKIIV
                     GAREGREVWEQTMLMEIAYPNINHDGIKIQSTSYVSGKLYFDLYKDLDGVPMAFGQHE
                     IYYDLFDSHYDFAQHIPGNTFKYLYDFTTNTKVPVFYNRKKSVWSVQDIANELHYLKD
                     MSGQLVEVAISFDKKYSLAEIKQMIPSNLKQNWYWIGTEGKQNTHYYRPEQLLGLDPE
                     DIQLVFSDMPGDYMTGMDFMKEFLESGDQERAQYLDIPVDDLQAFVDKFGGTDFTKQE
                     EIEQLEFAGIILTGKAEDFAQLEGKDWIYSSSIGASISIQPYYQLHH"
     gene            complement(953..1456)
                     /locus_tag="AC1PJC_001124"
     CDS             complement(953..1456)
                     /locus_tag="AC1PJC_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HIP6620116.1"
                     /translation="MSIKLDQYEKEIIGIAEEISYYLQKSGAGPADSQDIAQDVLVKL
                     LESDIVLPFEKLRAWLYRSAVRAYIDKYRRDKRYHEILQKEFFTPENFLVYDQEDYEE
                     LYQAVADLPEKYQQVIDLYYFQDMSIKEIAHILGAGQSWVKISLYRGRKLLAKNLKEK
                     GYEYEDF"
     gene            complement(1568..4264)
                     /gene="ppc"
                     /locus_tag="AC1PJC_001125"
     CDS             complement(1568..4264)
                     /gene="ppc"
                     /locus_tag="AC1PJC_001125"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HIP6620117.1"
                     /translation="MAIQKLENYNNKEAIREEVTILTSILEEVAAQMMPAETFAKIVE
                     LSQLSRQDDYQALIAIISQLNNDELAVISRYFAVLPLLINISEDVDLAYEINHQNNID
                     QDYLGKISTTIDMVSKQENAAEILEKLNVVPVLTAHPTQVQRQSMLDLTKHIHELLRR
                     YRDVKLGLLNKNKWEDELRCYIEIIMQTDMIREKKLKVTNEITNVMEYYNSSFIKAVT
                     KLQREYKRLAAEKGIVLNNPRPITMGMWIGGDRDGNPFVTAETLKLSALTQCEVIMNY
                     YDEQLYKLYRNFSLSTSIVNVSTAVKMLADLSEDSSVYRENEPYRRAFHYIQMKLANT
                     RDYLVHNKPSDVRYSNVAEFKADLLAIKQSLIENKSMALLKGDFTELLEAVEAFGFYL
                     ASIDMRQDSSIHEASVAELLASARIVEDYSSLSEEAKCHVLLKQLETDPRILSATHIP
                     KSEQLEKELAIFAAARELKDKLGEEIIKQHIISHSESVSDLLELAVLLKEVGLVDVDK
                     ARVQIVPLFETIEDLDNAPDTMRQYLQLDLAKRWIAGNKYYQEIMLGYSDSNKDGGYL
                     SSGWTLYKAQNELTQIGQDYGVNITFFHGRGGTVGRGGGPSYDAITSQPFGSIKDRLR
                     LTEQGEVIGNKYGNKDAAYYNLEMLVSATLDRMVTQMITDPNEIDGYRETMDEIVSDS
                     YRIYRDLVFNNPHFYDYFFAASPIREVSSLNIGSRPAARKTITEIGGLRAIPWVFSWS
                     QNRVMLPGWYGVGSSFKRFIDKHPDNLSKLQKMYESWPFFRSLLSNVDMVLSKSNMNI
                     AFEYAKMCESEEVRNIFHVILDEWQLTKEIILSIEQNDELLAELPFLKASLDYRMPYF
                     NVLNYIQIELIHRLRRGELSKEQENLIHITINGVATGLRNSG"
     gene            complement(4285..5499)
                     /gene="ftsW"
                     /locus_tag="AC1PJC_001126"
     CDS             complement(4285..5499)
                     /gene="ftsW"
                     /locus_tag="AC1PJC_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division peptidoglycan polymerase FtsW"
                     /protein_id="HIP6620118.1"
                     /translation="MKIDKRQLLNYSILIPYLILSVIGLVMVYSTTSATQIINGGNPF
                     RTVINQAGFWIVSLVAIYTIYRMKLSFLRKKAVIYSVILVEVFLLAISRLFPPINGAH
                     GWIPLPIAGTLQPAEYLKLIIIWYLAHEFAKQQADIRTYDYVSLIKGSWIPKEFTDWR
                     VVSLLLLGLVATLPDLGNATIIVLIMVVMISVSGIAYRWFSTAVLGIVAASTVILGTI
                     RILGVETVEKIPLFGYIARRFAAYFDPFGNATNSGLQLTHSYYAMSNGGWLGRGLGNS
                     IEKKGYLPEAHTDFAFSIVIEELGFVGASLILALLFFLIIRIIIVGVRARSPFNAMMA
                     LGMAGMLLIQTFVNIGGISGIIPATGVTFPFLSQGGSSLLIISIGIGFVLNIDASEKR
                     RLIEEEIERTLI"
     gene            complement(5636..6001)
                     /locus_tag="AC1PJC_001127"
     CDS             complement(5636..6001)
                     /locus_tag="AC1PJC_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4430 domain-containing protein"
                     /protein_id="HIP6620119.1"
                     /translation="MKKISIMLMVVFSLFLAACTNTTEKQNNSAIEVTLQITTKDKAN
                     RQEVTAEEGDSVMDVLKEHHDIVEDNGLITEIDGVSQDASTNTYWMYKVNGQMADKGA
                     KDLTVANGDEIEFYLETFE"
     gene            complement(5998..6501)
                     /locus_tag="AC1PJC_001128"
     CDS             complement(5998..6501)
                     /locus_tag="AC1PJC_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620120.1"
                     /translation="MHDKSEKVRRVSQLVVLSSLTIVLRVVFGPLPNIKPLTAIFLIV
                     LSYFSLLESWILMILVMVGSGLLFGFGTVVLWQVLSFAFIQFIWWLAIGPFIKKENIP
                     LWLQSLLAGILVFLYGLTISFLSATQFGTSPIVFWLNGLVFDSLHAASTVLFYPIIDY
                     IFRRFYK"
     gene            6614..7468
                     /locus_tag="AC1PJC_001129"
     CDS             6614..7468
                     /locus_tag="AC1PJC_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 25 protein"
                     /protein_id="HIP6620121.1"
                     /translation="MRKKLNPMIVVGFFLSFFALIFITGVTGNTVNKTEVTNEPAVTQ
                     SNTSTSSKTTNSSSSYYIANALEMKPIIDVSAWQRPSEIDYDTLSKNISGAIVRIQSG
                     SHTKNENTATDKNGLDKSFDTHIKEFQARNIPVAVYAYVTGNSIENMREEARSFYKAA
                     NKYKPTFYWLDVEEYTMDDMNAGVEAFRKELETLGAKNIGIYVGTYFMEDHSINVDKF
                     DAIWIPTYGDDSGYYNAAPNTDLDYDLHQYTSRGYVNGFEHHLDLNIITTLKDPNEVY
                     QKLFTTPE"
     regulatory      7492..7587
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:15.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            7646..8194
                     /gene="thiT"
                     /locus_tag="AC1PJC_001130"
     CDS             7646..8194
                     /gene="thiT"
                     /locus_tag="AC1PJC_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015234 - thiamine transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015888 - thiamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupled thiamine transporter ThiT"
                     /protein_id="HIP6620122.1"
                     /translation="MSTSKLPILAEVAIFSAIALVFDKIPLFTMPQGGSVSLVMLPIL
                     LLALRHGLGVGVLTGGIVGTIQLFYGGYFLNVFQVFLDYILSYAGIGLAGLVAPTLSK
                     QKNLKNATLIITLASFLGGSIRLLATFLSGIIFYADYAPDGMPVWFYSFTYNISYILP
                     STIIASILLILLYRARPVFYNL"
     gene            8297..9139
                     /locus_tag="AC1PJC_001131"
     CDS             8297..9139
                     /locus_tag="AC1PJC_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF368 domain-containing protein"
                     /protein_id="HIP6620123.1"
                     /translation="MASWISRIIKGMIIALGFILPGVSGGVLAAILGIYERLIGFLAN
                     IRKDFKENFLYFVPVGIGGILGIALFSFPVEFLLQHFQVPVLWAFAGAIVGTIPSLLK
                     ESTQKSKRDSIDLAWLIGTFIISGLLLYNLSDLVGTLPATFASFVLAGALIALGVLVP
                     GLSPSNLLLILGIYTPMLNGFKSLDLFGTFLPIAIGGVLAMVAFSKAMDHALKVYHSR
                     VYHFIIGIVSSSTLLILIPQANNKESISYAGANFVTWIAAIVLFILGAWLGLWMSKLE
                     EKYK"
     gene            9139..9621
                     /locus_tag="AC1PJC_001132"
     CDS             9139..9621
                     /locus_tag="AC1PJC_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA deacylase"
                     /protein_id="HIP6620124.1"
                     /translation="MAKKVKIKKTLVDQILDKAKINHDSLVLNAFEGQLPPGIEEHEI
                     YKTLALTGDKTGPIIGIVPITEHLSEKKLAKISGNKKVSMIPQKDLEKTTGYVHGANN
                     PVGIRQKHNFPIYIDQSALELGHLIVSAGEIGRSIKIDSRVLADFVKADFADLIEGRD
                     "
     gene            9624..10250
                     /locus_tag="AC1PJC_001133"
     CDS             9624..10250
                     /locus_tag="AC1PJC_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HIP6620125.1"
                     /translation="MKIYFVRHGKTEWNLEGRFQGYSGDSALLPESYQDLEKLGKYLA
                     EIPFDAIYSSDLQRAHSTAVEIAKANHHCQTVLTTQQLREWNFGTLEGSKMAIFRAIY
                     PKQAWALKHNLALFNNDLFEAESVRQVTQRMVDFVQSLKGQDMETILIVSHGAFLTAS
                     IHRLLGFPPAQLRHRGGLDNASVTILETSDFENFTELAWNDTSYKAKQ"
     gene            10353..11843
                     /gene="lysS"
                     /locus_tag="AC1PJC_001134"
     CDS             10353..11843
                     /gene="lysS"
                     /locus_tag="AC1PJC_001134"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HIP6620126.1"
                     /translation="MSTEHFEELNDQQIVRREKMTALAEQGIDPFGKRFERSANSAEL
                     RAQYEDKSKEDLEELGQTAIIAGRIMTKRGKGKAGFAHIQDREGQIQIYVRKDDVGEE
                     NYEIFKKADLGDFIGVEGDVFKTNVGELSIHARKLTHLSKALRPLPEKFHGLTDIETR
                     YRKRYLDLITNRESFDRFVTRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAARPFI
                     THHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNPEFTSIEVYQ
                     AYADYQDIMDLTEGIIQHTAKAVVGDGPVTYQGTEIVIHEPFKRIHMVDAIKEQTGVD
                     FWQEMSFEEAKALAAEHKVPVEKHHTEVGQIINSFFEEYVEATLIQPTFVYGHPVAVS
                     PLAKKNDEDPRFTDRFELFIMTKEYGNAFTELNDPIDQLERFEAQAKAKELGDDEATG
                     VDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK"
     gene            complement(12406..13470)
                     /locus_tag="AC1PJC_001135"
     CDS             complement(12406..13470)
                     /locus_tag="AC1PJC_001135"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HIP6620127.1"
                     /translation="MVELGISTFGETTPLEETGETYSHDERIRQLVKEIELADAVGLD
                     VYGIGEHHREDFAVSAPEIVLAAGAVNTKHIKLTSAVSILSSMDPVRLYQQYTTIDAL
                     SNGRAEIMAGRGSFTESFPLFGYDLHDYEELFDEKLDMLLEIDKETNLKWDGHFTQSV
                     DNKPVYPRPVQEDFPIWVATGGNVESTIKIAKKGLPIVYAVIGAGAHRFKPLVDAYRK
                     VARNSGHDPKKTKVAAPSWGWIADDHDKAVEEYYHPTKVITDNIAKDRPHWSEMTKAQ
                     YLYSLTDEGATIVGDPTHVAAKIIKTIETLDLDRFFLHLPIGSMPHEDVLRAIELYGK
                     EVAPIVRDYFAKKEENQSQG"
     gene            complement(13594..14841)
                     /locus_tag="AC1PJC_001136"
     CDS             complement(13594..14841)
                     /locus_tag="AC1PJC_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIP6620128.1"
                     /translation="MENWKFALKSIMAHKMRSLLTMLGIIIGVAAVVIIVAMGTGMSK
                     SIEKSLAGDQNNVQVYFTAFSRSSTAFGPFGTVSTEEPILEEEPDLTDSTLKGLLEID
                     GVSSYYSSISNMAEVSSGNKKAENVTITGVSQNYFAVKEYEILAGRQFTANDYSRFSR
                     MIMLDTALAEKLFGSIEDSLNQTISVNSNAYLVIGVYKDPKAGTAIYGMNSGGNAVMT
                     NTQLAAETGMKENSQIYVHVEDVTRATEVGQAAADYLTKATGLKEARYEIYDMSAMLE
                     EFKSQMSGVTLFIGAVAGISLLVGGIGVMNIMLVSVTERTREIGLRKALGATRGNILM
                     QFLIEAMVLTTLGGAIGLAIAQTIVFLLNVSKAMGERITAEVSIPVVLGSLAFSAVVG
                     IVFGVLPANKASKLDPIEALRYE"
     gene            complement(14842..15537)
                     /locus_tag="AC1PJC_001137"
     CDS             complement(14842..15537)
                     /locus_tag="AC1PJC_001137"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6620129.1"
                     /translation="MKNQLIRLTNINKSYKNGDQELRVLKDIDLEVEEGEFLAIMGPS
                     GSGKSTLMNIIGLLDRSSSGNYWLEGEEVSQLSEKKLAQVRNDQIGFVFQQFFLLSKL
                     NALQNVELPLIYAGVPSSKRKELAKQYLEKVELAERMTHLPSELSGGQKQRVAIARAL
                     VNTPSIILADEPTGALDTKTGEQIMQLLTELNNEGKTIIMVTHEPEIAAYAKRKIVLR
                     DGVITEDSRREGV"
     gene            complement(15518..16678)
                     /locus_tag="AC1PJC_001138"
     CDS             complement(15518..16678)
                     /locus_tag="AC1PJC_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0042802 - identical protein binding
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HIP6620130.1"
                     /translation="MLKTKKAKIALFGGLGVVAVALVGGALIFSNMLTSSPSSEEVAM
                     SMTYTVAKEGSIASSTLLTGTITAADEQYVYYDPSKGDLSEVLVAPGTQVEVGTPLIR
                     YDATELQSALDTAVRGRDKIGRQIEDLRTNGQTVQTTGDAETDAAATATAQRSVDMQL
                     ADLNDSYADAQAAVDKAYTALTEATVTSTVAGTVVEVNKAVSKNSTSSQTVVHIVNQG
                     SLQVTGSLTEYDLANIAVDQEVKLTSKVYPDKTWTGKITYISNYPSSDQAGAAPTTGT
                     GGSGAKYPFKAALTSELGELKQGFSVNIEVVNTSKNILIPVSAVVPEEDKNYVWTLVD
                     GKAKKVEVTLGNADALNQEVTAGVAVGDKVITIPTPDLEDGKEVEANEEPAY"
     gene            16892..18241
                     /gene="gorA"
                     /locus_tag="AC1PJC_001139"
     CDS             16892..18241
                     /gene="gorA"
                     /locus_tag="AC1PJC_001139"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015511376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004362 - glutathione-disulfide reductase
                     (NADPH) activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HIP6620131.1"
                     /translation="MKVFDIIAIGGGSGGIATMNRAAMYGARAAVIEGSYLGGTCVNL
                     GCVPKKIMWYGSQVAEAIHHYGPEYGFTSQDVKFDFATLRKNREAYVERSRASYGNTF
                     NNNGVEVIQGFARFVDNQTVEVNGELIRAKHIVIATGAKPVVPAIPGSELGIVSDDVF
                     AWEELPSSVAVIGAGYIAVEMAGLLHGLGVQTDLFVRGNRPLRSFDTYIVDALMEEMQ
                     RTNLPLHTGKTPVSLEKTDDGQIQINFADGSSHIAQKVLWAIGRKPNIDKLNLEATSI
                     QLTSSGHISVNEYQETAVPGIYALGDVTGEKELTPVAIKAGRLLAERLFNNKPTAKMD
                     YTTIPTVVFSHPAIGTVGLTEDEAIAQYGQANVKVYTSAFTSMYTALENNRQMAKFKL
                     VTVGENEKVVGLHGIGYGVDEMIQGFSVAIKMGATKEEFDAVVAIHPTGSEEFVTMR"
     gene            complement(18292..19029)
                     /locus_tag="AC1PJC_001140"
     CDS             complement(18292..19029)
                     /locus_tag="AC1PJC_001140"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014713635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HIP6620132.1"
                     /translation="MTELLDIYRTLKSKTWVDLTHQINEKSPHFPALPALEKKALFTH
                     KDGFFVEQFTVVGQYGTHIDPPIHFVEGARYLDEIDLKDLLLPLYVIDKSAAVIENND
                     YEITKQDILDFEAEYGPIAPESFVAFRSDWSKRWPSQDAIRNLDEDGVQRTPGWSHEA
                     LEYLIEERQVKAVGHETLDTDSGVSAAKHGGSLPEEYYLLSKDIYQLEVLANLNQVPP
                     TGALISIAFPHWEKASGSPVRAIAILP"
BASE COUNT         5593 a         4213 c         3623 g         5625 t
ORIGIN      
        1 ttaatgatgc agttgataat aaggctgaat agaaatggac gcgccaatac tagaagaata
       61 aatccagtcc ttgccttcca actgagcaaa gtcttctgct tttcctgtta ggataatgcc
      121 tgcgaactcc aactgttcaa tctcttcctg tttggtaaag tcagtgccac caaacttatc
      181 gacaaaggcc tgcaagtcat ccacaggtat gtccagatac tgtgctcgct cctgatctcc
      241 cgattctaag aactctttca taaagtccat acctgtcata tagtctccag gcatatccga
      301 aaagactagt tgaatatcct ctggatctaa ccccaaaagc tgctctggac gatagtaatg
      361 ggtattctgc ttcccttctg tccctatcca ataccaattt tgcttgagat tgctgggaat
      421 catttgcttg atttctgcca aactgtactt cttatcaaag gaaatagcca cttctactag
      481 ctgcccactc atgtctttaa gataatgcaa ttcattggca atgtcttgaa cactccaaac
      541 ggactttttt ctattgtaaa aaacgggtac cttggtattg gttgtgaaat catatagata
      601 tttgaaggta ttgccgggta tatgctgggc aaagtcataa tgactatcaa acaggtcata
      661 gtaaatctcg tgctgaccaa aagccatagg aacaccgtct aaatccttgt acaaatcgaa
      721 gtagagcttc ccagagacat aacttgtact ttggatttta atgccatcat gatttatatt
      781 tggataggcg atttccatta gcattgtttg ttcccacacc tcacgacctt ctcgtgcacc
      841 aacaatgatt tttactgttt gaacggcaat aagcattaag atgaagccaa tgagcgatga
      901 tagccctatt gtcttccata aatttttccg cttactcttt tttgtcacct cttcaaaagt
      961 cttcatattc ataccctttc tcttttaagt tttttgctag aagttttcgt cctcggtaaa
     1021 ggctgatttt cacccaactt tgaccagcac ctaaaatatg cgcaatctct ttgatactca
     1081 tatcttggaa gtagtataag tcaatcactt gctggtattt ttctggcagg tctgcaacag
     1141 cttgatagag ttcctcataa tcttcttggt catagaccaa aaaattttca ggtgtaaaaa
     1201 actccttttg taaaatttca tggtagcgtt tatctcgcct gtatttgtca atgtaagccc
     1261 gaactgcaga acggtaaagc caagctctta gtttttcgaa aggaaggaca atatcagatt
     1321 caagcaattt gactagaaca tcttgggcaa tatcctgact gtcagctggg ccggctcctg
     1381 atttttgcaa atagtaggaa atctcctctg caataccaat aatttctttt tcatattgat
     1441 ctagtttgat acttatcccc tcctttcact gataaaacga ataaggggtg atttggttac
     1501 gttttcttat tattatatat ttttagaata gaaaaaaaca acctccgaag aagttgtttt
     1561 atacctatta acctgagttg cgcaaacctg tcgccacacc attgatggta atatgaatga
     1621 gattctcttg ttctttgctc aattctccac gacgaagacg atgaattaat tcaatctgaa
     1681 tatagttgag cacattgaaa taaggcatgc gataatcaag actagctttt agaaacggta
     1741 gttctgctaa aagctcatca ttttgctcga ttgacaaaat aatttctttg gtcaactgcc
     1801 attcatctaa aatgacatgg aagatatttc gtacctcttc gctttcacac attttagcat
     1861 attcaaatgc gatattcata ttggatttag acaataccat atccacgttt gatagaagtg
     1921 aacggaagaa cggccaagat tcgtacattt tttgtaactt agacaaatta tcagggtgct
     1981 tatcaataaa gcgtttgaaa cttgaaccaa ctccatacca acctggcaac atgacacggt
     2041 tttgtgacca agagaatacc catggaatcg cacgcaaacc accgatttct gtgatggttt
     2101 ttcgagccgc tggacgtgag ccaatgttca aacttgatac ttcacgaatt ggactagcag
     2161 caaagaaata atcataaaaa tgtggattgt tgaatacaag atctctataa atacgatagc
     2221 tatctgatac aatttcatcc atggtttcgc gatagccatc gatttcattt ggatcggtaa
     2281 tcatttgtgt gaccatacgg tcaagcgttg cagataccag catttctaaa ttatagtagg
     2341 ctgcatcttt gttaccgtat ttattgccta tcacttcgcc ttgttctgtc aaacgaagcc
     2401 ggtccttaat agaaccaaat ggctgagatg taatcgcatc ataggaagga cctccaccac
     2461 gaccaacagt acctccgcga ccgtggaaga aggtgatgtt tactccgtag tcttgaccaa
     2521 tttgcgtcaa ttcattctgt gctttgtaga gtgtccagcc ggaggatagg tagcctccat
     2581 ccttgttgga atctgagtag ccaagcatga tttcttggta gtatttattg cctgcaatcc
     2641 aacgtttcgc taaatctaat tgcagatatt gacgcatggt atcaggtgca ttatctaagt
     2701 cctcgattgt ctcaaaaagt ggaacaatct gaacacgggc cttatcgaca tctactagac
     2761 caacttcttt taataggaca gctaattcca gtaaatcaga aacactctcc gagtgtgaaa
     2821 taatatgttg cttgatgatt tcctcaccta gcttatcttt caattcacgc gcagcagcaa
     2881 agatggccaa ttctttttct aattgttctg actttggtat gtgcgttgca gaaagaatgc
     2941 gtggatctgt ttccaactgt ttcaaaagaa catggcattt agcttcctca gataaactgg
     3001 agtagtcttc tacaatacgg gcagaggcca atagctccgc aacacttgct tcatgaatag
     3061 aagagtcttg gcgcatatcg atactagcta ggtagaaacc aaacgcttca accgcttcaa
     3121 gcaattctgt aaaatcacct ttcaatagcg ccatagattt attttcaatc aaagattgtt
     3181 tgatggctaa taaatcagct ttaaactcgg ctacattact atagcgaaca tctgacggct
     3241 tattgtgaac tagataatct cttgtatttg caagtttcat ctgaatatag tgaaaagcac
     3301 gacgataagg ctcattttca cggtagacag aactatcttc agataaatcc gccagcatct
     3361 taaccgctgt agatacattt acaatggaag ttgagagcga aaaattccga tagagtttat
     3421 agagttgctc gtcgtaataa ttcataatga cttcacactg agtcaaggct gacagcttca
     3481 aggtctctgc agtaacaaat ggatttccat cacggtctcc cccaatccac atacccattg
     3541 taattggacg aggattattt aagacgattc ctttctcagc ggccaaacgt ttgtattccc
     3601 gctgcaactt agtgacagcc ttaataaagg aagaattgta atactccata acgtttgtga
     3661 tttcgttggt taccttcaac ttcttctcac gaatcatatc cgtctgcatg ataatttcaa
     3721 tgtaacaacg gagctcatct tcccatttgt ttttattgag caagcccaat tttacatcgc
     3781 gataacgacg aagcaactca tgaatatgct tggttaaatc aagcatagac tggcgttgaa
     3841 cctgagtagg atgggctgtc aagactggaa caacattcaa cttttcaagg atttcagctg
     3901 cattttcttg tttggaaacc atatcaattg ttgttgaaat cttaccaaga taatcttgat
     3961 caatattgtt ttgatgattg atttcatagg ccaaatcaac atcttctgat atattaatca
     4021 aaagtggcaa aacagcaaag tatcgagaaa taactgctag ttcatcatta ttcaactgac
     4081 tgataatagc aatcaatgcc tgataatcat cttgacgaga caattgagat aattctacaa
     4141 ttttagcaaa agtctctgca ggcatcattt gggctgctac ttcttccaaa atagatgtta
     4201 gaatcgttac ttcttcacgg attgcttcct tgttgttata gttttctaat ttttgaatag
     4261 ccatctccta cctctttcct atctctaaat tagcgtacgc tctatttctt cttcaattaa
     4321 tcgacgtttt tcactagcat caatattcag aacaaaccct atcccgatgg aaataatcaa
     4381 aagactcgat ccaccctgtg acaagaaggg gaaagttacc cccgttgcag gaataattcc
     4441 tgaaatccct ccgatattga caaatgtttg aatcagaagc atacctgcca ttccaagtgc
     4501 catcatcgca ttaaatggac tacgagcacg gactcctaca ataataattc gaataatcaa
     4561 aaagaacaat aaggctagaa ttaaactagc tccgacaaaa ccgagttctt caatgacaat
     4621 cgaaaacgca aagtcggtgt gggcctctgg tagatacccc tttttctcaa tcgaatttcc
     4681 caaaccacgt ccaagccatc caccgttact catcgcatag taagaatgag tcaattgaag
     4741 acctgagttg gtggcattac caaatggatc aaaataggca gcgaaacgac gagcaatata
     4801 accaaagagc ggaatttttt ccaccgtttc tacacccaaa atacgaatag tccctagaat
     4861 aactgttgag gcggccacaa ttcccaaaac tgctgttgaa aaccagcgat aggcaatccc
     4921 actcacacta atcatcacga ccataatcag cacaataatc gtcgcatttc ccaagtccgg
     4981 tagtgtcgca actagaccaa ggaggagcag actgaccacc cgccaatctg taaactcttt
     5041 cggaatccaa cttcctttaa tcaacgatac atagtcataa gtccgaatat ccgcctgttg
     5101 ttttgcaaac tcatgtgcca gataccaaat gataattaat ttcaaatatt ctgccggctg
     5161 caaggttcct gcgattggca gaggaatcca gccatgagcc ccgttaatcg gaggaaacaa
     5221 ccgagaaata gctaacagaa atacttctac caaaataacc gaatagataa cggctttctt
     5281 gcgtaaaaaa cttaatttca tacgataaat cgtatagatt gctaccaagc tgacaatcca
     5341 gaatcctgcc tggttaatca ctgttctaaa tggatttcca ccattaataa tttgcgtagc
     5401 actggttgtc gaatagacca tgaccaaccc aatcaccgat aagatgagat agggaatcag
     5461 tatggaataa ttcaacaact ggcgtttgtc aatcttcatt gcttatccaa ccttcttcga
     5521 gtatagctct tattatagca tactttgtat aaaaatactt atcactttct aagttgctct
     5581 gcaaacattc ggaactaact tttgtcaaca agaaaaaggc cgaagccttt catatctatt
     5641 caaatgtttc aagataaaat tcaatttcat ccccattcgc aactgtaagg tctttcgccc
     5701 ctttatcagc catttggcca ttaactttat acatccagta tgtattagtg ctcgcatctt
     5761 ggctaacacc atcaatttct gttatcaaac cattgtcttc tacaatgtca tgatgttctt
     5821 taagtacatc catgacacta tcaccttctt ccgcagtgac ttcctgacga ttcgctttgt
     5881 ccttggttgt aatctgcaaa gtgacctcga tagccgagtt gttctgtttc tcagtggtgt
     5941 ttgtacaagc agccaagaag agcgagaaga caaccatcaa cataatacta atttttttca
     6001 tttataaaat ctcctaaaaa tataatcaat aattggataa aacaaaactg ttgaagcagc
     6061 gtgtaaacta tcaaagacta gaccattaag ccagaagacg ataggggaag tcccaaactg
     6121 tgtagcagat aaaaaactta tcgttagccc atacaaaaag acaagaatcc ccgccagaag
     6181 actctgtagc cacaagggaa tgttctcttt tttgataaaa ggaccgattg ccaaccacca
     6241 tataaattgg ataaaagcaa aactaagaac ttgccacaaa acaactgtgc caaatccaaa
     6301 tagcaagcca ctccctacca tcactagtat catcaatatc cagctctcca gcaaactgaa
     6361 ataggacaga acaatgagga aaatagccgt gagaggcttt atattgggca acggtccaaa
     6421 aaccaccctt aaaacaatcg tcaaagagga cagaacaact agctgactaa cacgtcttac
     6481 tttttcactt ttgtcatgca taccaattta gactacccta ttccctttat tatgtcaagt
     6541 tcagataatc ttttactatt tcttgaatcg tatttttttg attttttcat gattttacgg
     6601 tagaattgaa gagatgagaa agaaactaaa tccgatgatt gttgttggtt ttttcctatc
     6661 cttctttgct cttattttca tcactggggt gactggaaat actgtaaata agacggaggt
     6721 aactaacgaa cccgcagtca cacaatcaaa caccagtaca agttctaaaa caacaaattc
     6781 tagctcaagt tattacattg caaatgcgct cgaaatgaaa cctatcatcg acgtttctgc
     6841 ttggcagaga ccgtctgaaa ttgactacga tacccttagc aaaaacattt ctggcgcaat
     6901 cgtccgtatt caaagtggct cacacactaa aaacgaaaat actgcgactg ataaaaatgg
     6961 gttagataaa tcctttgata cccatattaa agaatttcaa gcaagaaata tacctgttgc
     7021 tgtctatgcc tatgtcacgg gaaatagcat tgagaacatg cgagaggaag ctcgaagctt
     7081 ttataaggcc gcaaataagt acaagccaac cttctattgg ttagacgttg aagaatatac
     7141 catggatgat atgaatgctg gagtggaggc ttttcgaaaa gagttagaaa ctctcggcgc
     7201 taaaaacatt ggaatttacg tcggaaccta tttcatggaa gaccacagca tcaatgtgga
     7261 taaatttgac gccatttgga ttcctacata cggtgatgat tctggctact acaatgccgc
     7321 tccaaatact gacttggact acgatcttca ccaatatacc tcacgtggtt atgtaaacgg
     7381 ctttgagcat cacctagacc tcaacattat tactaccctg aaggatccta atgaagttta
     7441 tcagaaacta tttacaacac ccgaataaaa tgctacaatc tcactaatta catatacaca
     7501 aaggagtgct tcggctgaga tcgcaactgc gaaatcctcg aacctgatct agttaaaact
     7561 agcgtaggaa ttgtgtgctt tatagaatga tactatactc tgctataaac actcctttgt
     7621 tgaccatcta caaaggagtc tttttatgtc cacatcaaaa ttacccatcc tagccgaagt
     7681 cgctatcttt tctgcaattg ccctcgtctt tgacaaaatc ccgctcttta caatgcccca
     7741 aggtggatcc gtgtctttag tcatgcttcc aatcttactg cttgctctgc gccacggact
     7801 aggggtaggg gttcttactg gtggtattgt aggaaccatt caacttttct acggtggcta
     7861 cttcctaaac gtttttcaag tttttcttga ctacatactt tcttacgccg gaattggttt
     7921 agcaggttta gtggctccca ccctatccaa acaaaaaaat ctaaaaaatg ctactctcat
     7981 cattactctg gctagttttc taggaggaag catccgattg ttagccacct tcttatcagg
     8041 aattattttc tacgcagact acgctccaga tggtatgcct gtctggttct attcctttac
     8101 ctacaatatc agctatattc ttccttccac tataattgcc tctattctgc tcattttact
     8161 ctatagagca agaccagttt tttacaatct ttaaccaaaa ctgcctgctg gattttatct
     8221 aacaggcagt ctttttaatt atttttactt gctttatgct ataataggaa cgttataata
     8281 cattttggag gaaattatgg cttcttggat ttcaagaatt attaaaggta tgattatcgc
     8341 actcggcttt atcttacctg gtgtctctgg gggggtactc gctgctatcc tcggaatcta
     8401 tgagcgacta attggatttt tagcaaatat tcgaaaagat ttcaaggaaa actttcttta
     8461 ttttgttcct gtaggaattg gtggaatttt gggaatcgca cttttctctt tccctgtaga
     8521 atttttattg caacatttcc aagtcccagt tttgtgggcc tttgcgggag caatcgtggg
     8581 aactattcct agcctactta aagaatcaac tcaaaagagc aaacgagata gcattgattt
     8641 ggcttggttg attgggacat tcattatttc tggcctccta ctttacaatt tgagcgatct
     8701 tgtcgggaca cttccagcta cttttgctag ttttgtattg gcaggtgcct tgattgcttt
     8761 aggggtactt gttcctggac tcagcccttc aaacttacta ttgattttgg gtatctacac
     8821 gccaatgcta aatggtttca aatcactgga tctattcggt accttcctac caatcgcaat
     8881 cggtggcgtt cttgcaatgg ttgcattttc aaaagcaatg gaccacgctc tgaaagtata
     8941 ccattcacgt gtttatcact ttattattgg tatcgtctcg tcttctactc tcctaatttt
     9001 gattccacaa gcaaataata aagagtctat ttcctatgct ggcgctaact ttgttacatg
     9061 gattgctgct attgtcctat ttatactagg agcatggtta gggctttgga tgagtaaact
     9121 tgaggaaaaa tataaataat ggcaaaaaag gttaaaataa agaaaacctt ggtggaccaa
     9181 atattggaca aggctaagat caatcatgat agccttgttt taaatgcctt cgaaggtcaa
     9241 cttccaccag gaattgaaga acacgaaatt tacaaaacac tggcattaac tggagataaa
     9301 actggaccaa ttatcggcat tgtcccaatc acagaacacc tgtctgagaa aaaattagcc
     9361 aagatctctg gcaataaaaa agtgagtatg attccgcaaa aggacttgga aaagacaact
     9421 ggctacgtcc acggcgccaa caatcccgtg ggcattcgtc agaagcataa tttcccaatc
     9481 tacattgatc aatcagccct tgaactcggt cacttgattg tctctgctgg agaaattggt
     9541 cggtcgatta aaattgatag ccgggtatta gctgattttg taaaagctga ctttgccgat
     9601 ttgattgagg ggagggacta gacttgaaaa tctactttgt ccgtcacggt aagaccgaat
     9661 ggaatttgga gggacgcttt caaggctatt ctggagattc ggctctcttg cccgaatctt
     9721 atcaggattt agaaaaactt ggcaaatacc ttgctgaaat cccctttgat gctatttatt
     9781 ctagtgattt gcagcgcgca catagcactg ccgtagaaat tgctaaagcc aatcaccatt
     9841 gccaaaccgt tctaaccacg caacaattac gtgaatggaa ttttggaacg ttagaaggaa
     9901 gcaagatggc aatttttcgt gccatctacc ccaaacaagc ctgggcactc aaacataatc
     9961 tagcactttt taacaatgac ttatttgaag ctgagagcgt tcgccaggta actcaacgaa
    10021 tggtggactt tgtccaatcg ctgaaagggc aagacatgga aacaatcctc atcgtcagcc
    10081 atggtgcctt tctaaccgct tctatccatc gcctacttgg ttttccacca gcccaactgc
    10141 gtcaccgagg tggtttggat aatgcatcgg ttactatttt agaaacaagc gatttcgaaa
    10201 actttacaga attagcttgg aatgatacca gctataaagc aaaacagtag aattttctgc
    10261 tgttttttcc tatcctatta gcaatttata ctgatttttt ctctcttcta tgataaaata
    10321 gaaataacag actttggagg aataaaattt ttatgtcaac tgaacatttt gaagaattaa
    10381 atgaccaaca gattgtccgt cgtgagaaaa tgacggctct tgctgaacaa ggcattgacc
    10441 catttggaaa acgttttgag cgttctgcca actcagctga attgagggcc cagtacgaag
    10501 acaaatcaaa agaagacttg gaagaattag ggcaaacagc aatcattgca ggtcgtatta
    10561 tgaccaagcg tggtaagggt aaggcaggtt ttgctcacat tcaagaccgc gaaggccaga
    10621 ttcaaatcta cgttcgtaag gatgatgttg gcgaagaaaa ttatgaaatc ttcaaaaaag
    10681 cagaccttgg tgactttatc ggtgtcgagg gagatgtctt caagacaaac gttggtgagt
    10741 tgtctatcca tgctcgcaag ttgactcact tgtctaaagc gctccgccca ttgccagaaa
    10801 aattccacgg attgacagac atcgagaccc gctaccgcaa acgttatttg gacttgatta
    10861 ctaaccgcga gagctttgat cgctttgtga cccgctcaaa aattatctca gaaatccgtc
    10921 gttaccttga cggacttggt ttcttggaag tggaaacacc agttcttcac aacgaagctg
    10981 gtggtgctgc agctcgtcca ttcatcaccc accacaatgc ccaaaacatt gacatggtcc
    11041 ttcgtatcgc gacagaactc cacctcaaac gcctgattgt cggcggtatg gaacgcgttt
    11101 atgaaatcgg acgcatcttc cgtaacgaag gtatggatgc gacccacaac cctgagttca
    11161 cttccattga ggtttaccaa gcttatgcag actaccaaga catcatggac ttgaccgaag
    11221 gtattatcca gcacactgcc aaggctgttg tcggcgatgg tcctgtgact tatcagggca
    11281 ctgaaattgt tatccatgag ccattcaagc gtatccacat ggttgacgct attaaggaac
    11341 aaactggcgt ggacttctgg caagagatga gcttcgaaga agcaaaagcc ctagcagctg
    11401 agcacaaggt ccctgtggaa aaacaccata cagaagttgg tcaaatcatc aacagcttct
    11461 ttgaagaata cgttgaagca actcttatcc aaccaacctt tgtctatggt cacccagtag
    11521 ccgtatctcc actggctaag aaaaacgatg aagacccacg cttcacagac cgctttgagc
    11581 tcttcatcat gaccaaggaa tacggaaatg cctttacaga attgaacgac ccaatagacc
    11641 aattggaacg ctttgaagcc caagccaagg ctaaagaact cggtgacgac gaagcgacag
    11701 gcgttgacta cgattacatc gaagccctcg aatacggtat gccaccaaca ggcggcttgg
    11761 gaatcggtat cgaccgcctc tgcatgctct tgacagatac cactactatt cgggatgtac
    11821 tcctatttcc gactatgaag taagcaagag gagcttgcta ggattgtttt cactaggatg
    11881 ttccaatcgc tctccagttt cttggcgaat gactgacaag gtctactaga ccttgtcact
    11941 ccctacaatg aagtaagaaa cagtagcttg ctaggtttgt tttcactaga atgtacctcg
    12001 ctttcatgct tcttggcgat tggctgacaa ggtctgctag accttttcac tcccgacgat
    12061 gaaaataaaa attacaaact gtttaacacc gttacttaaa acactcttgg aaattccaag
    12121 agtgtttttg catgcaaaaa atcccaacca catggttagg attttcagga gattatgaaa
    12181 aatatttagg attgggagtg ggacagaact caaataatca tagagagttc gtcaacaagt
    12241 tcatatttcc agttgttgag ctgaaacacg aattgctgag atttgcttcg caaatcttat
    12301 ctccaacctt taacagtcca ctggactgtt aaacccaatc aaccactgcg ctgagatgtt
    12361 gactccactt tagagatgtg aggctattat aacgtcccct cctttttagc cttgggactg
    12421 attctcttct ttttttgcaa aataatctcg gacaattggc gcaacttctt ttccgtagag
    12481 ttcgatagca cggaggacat cttcatgtgg catggagccg attgggagat ggaggaagaa
    12541 acggtccaag tcaagtgttt caatagtctt aatgatttta gctgcaacat gtgttggatc
    12601 tccgacgatg gtcgctccct catctgtaag ggagtagaga tattgcgcct ttgtcatttc
    12661 gctccaatgt gggcggtctt tggcaatatt gtccgtaatt actttggttg gatgatagta
    12721 ttcttccaca gccttgtcat ggtcgtctgc aatccaaccc caggaagggg ctgcaacttt
    12781 cgttttcttt ggatcatgac ctgagttgcg agcaaccttg cgataagcat cgactaaagg
    12841 tttaaagcga tgggcacctg caccaatgac tgcatacacg attggcaggc ctttcttagc
    12901 aatcttgatg gtggactcta cattgccccc agttgcaacc cagatcggaa aatcttcctg
    12961 aacaggacgt ggatagactg gcttattatc gactgactgg gtaaaatgcc catcccactt
    13021 gagattggtt tccttgtcga tttccagaag catatctagc ttttcatcga agagttcttc
    13081 atagtcgtgg agatcatagc caaacaaggg gaatgactcc gtaaaggaac cacgacccgc
    13141 catgatttcc gctctgccat ttgacaaagc atcaatggtg gtatattgct ggtaaagcct
    13201 cacagggtcc atggaggaaa ggattgaaac tgctgatgtt agcttgatat gcttggtatt
    13261 gacggcacca gctgccagca caatctcagg tgcagaaacc gcaaaatctt cgcggtgatg
    13321 ttcaccaatc ccataaacat caagccccac cgcatcagct agttcgattt ctttgactag
    13381 ctggcgaatc cgctcgtcgt ggctgtaagt ttcccctgtt tcttctagtg gagttgtttc
    13441 gccaaatgtt gaaataccta attctaccat gatgtgttct cctttgaaat cactatttct
    13501 taattgatgc gtttatttta tctctaatta gtgataaagt caattgattt gctcaaaata
    13561 aaacgactag gaaaacctaa tcgtttcaat agattattca tagcgcaaag cttcaattgg
    13621 atcaagctta gatgctttgt tggcaggtag tacgccaaat acaataccaa ctaccgctga
    13681 gaaagccaga cttcccagaa caactggaat tgaaacttca gcagttattc tttctcccat
    13741 cgccttgctc acattgagca agaagactat tgtttgggca attgcaagac caatcgctcc
    13801 accaagagtg gtcaagacca tggcttctat caagaattgc atcaagatat tgcctcgggt
    13861 tgctccaagc gcttttcgaa gaccgatttc acgagtccgc tcagttactg acaccagcat
    13921 gatattcatg acaccgatac caccaaccag caaggagata cctgcaacag caccgataaa
    13981 taaggtaaca ccagacattt gagatttaaa ctcttccaac atggctgaca tatcataaat
    14041 ctcgtatctc gcttctttca atccagtcgc tttagttagg taatctgcag cggcctgacc
    14101 aacttctgtt gcccgagtaa catcttcaac atggacatag atttgagaat tctctttcat
    14161 gcctgtttca gcagccagct gcgtattagt catgacggca tttccacctg aattcattcc
    14221 ataaatagct gtccctgctt ttggatcttt gtaaactcct attacgagat aagcattgct
    14281 attgacacta atcgtctgat tgagagagtc ctctatagaa ccaaacaact tctcagctag
    14341 tgccgtatct agcataatca tacgtgaaaa acgactataa tcgttagctg taaattgacg
    14401 accagctaaa atttcatatt ctttcacagc aaagtaattc tgactgacac cagtaatggt
    14461 aacattctct gcttttttat tgcctgagct gacttcagcc atgttactga tactggaata
    14521 atagctcgat acaccatcaa tctctagcaa tccttttaaa gtagaatccg tcaaatctgg
    14581 ctcttcctct aagattggtt cttccgtcga tactgttcca aatggaccga aggctgtgct
    14641 tgatctggag aaggcagtaa agtaaacttg aacattattt tgatcaccag ctagagactt
    14701 ttctatgctc ttggacatcc ctgtacccat ggcgacaata atgacaactg cagctacacc
    14761 gatgatgata cctaacatcg taaggagcga cctcatttta tgagccataa tagatttgag
    14821 ggcgaatttc caattttcca tctaaactcc ctcccttcga ctatcttcgg taatcactcc
    14881 atcacgtagg acgatttttc gtttggcata ggctgcaatc tcaggctcat gtgtaaccat
    14941 gataatggtc tttccttcat tattcaactc cgtcagaagt tgcataatct gctcgcctgt
    15001 cttagtatct aaggcccctg taggctcatc tgctaaaata atagacggag tattgaccag
    15061 tgcacgcgca atagccaccc gttgtttttg accaccagac aattccgatg gtaaatgcgt
    15121 cattcgctct gccaactcga ctttttcaag atattgtttc gctagttcct tacgtttgct
    15181 tgatggaact ccagcataaa tcaagggtaa ttctacattc tgaagggcgt taagtttcga
    15241 taagaggaaa aattgttgga agacgaaacc gatttggtca ttccgaacct gagctaattt
    15301 tttctcagaa agttgactga cttcttcacc ttctaaccaa tagtttcctg aactggaacg
    15361 atctaaaaga ccaataatgt tcatcagggt tgatttacct gaaccagaag gtcccataat
    15421 ggcaagaaat tctccctctt ccacctctaa atcaatatcc tttagaactc ggagctcttg
    15481 atcaccattt ttgtaggatt tattgatatt cgttaatcta ataagctggt tcttcattgg
    15541 cttcaacctc tttgccatct tcgagatccg gagttggaat ggtaataacc ttatcaccta
    15601 ctgctacgcc agcagtcact tcctggttca aagcatctgc gtttccgaga gtgacttcca
    15661 ctttcttagc tttcccatca accaaggtcc acacatagtt tttatcttct tctggcacaa
    15721 ctgcggacac cggaattaaa atgtttttac ttgtattgac aacctcaata tttacagaaa
    15781 atccttgctt caactcacct aattcactag ttagagctgc cttaaatgga tatttagcgc
    15841 ctgaaccacc agttcctgtt gtaggtgcgg caccagcttg atcactagat ggatagtttg
    15901 aaatataggt aattttcccc gtccaagtct tatcgggata taccttgcta gtcagcttga
    15961 cctcttgatc cactgcaatg ttagccaaat cgtattctgt caaactacct gttacttgca
    16021 aactaccttg atttacaata tgtacgactg tctggctaga tgtagagttc ttagaaacag
    16081 ccttattcac ttcaacaact gtaccagcaa cggtactagt tactgtcgct tcagttaagg
    16141 ctgtataggc tttatcgacc gcagcttgag catctgcgta cgaatcattc aagtctgcca
    16201 actgcatatc tactgaacgt tgtgcagtag cagttgctgc agcatctgtt tctgcatcac
    16261 cagttgtttg aacagtttga ccattggttc ttaagtcttc aatttggcga ccaatcttat
    16321 cacgaccacg aacagcagta tccaaagcag actgtaattc tgtagcatca tagcgaatta
    16381 aaggagtacc tacttcaacc tgagtacctg gagcaaccag aacctcactc aaatccccct
    16441 tagaaggatc atagtaaaca tactgctcat ctgctgctgt aatcgttcct gtaagcagcg
    16501 ttgaggaagc aatcgagccc tctttagcaa cagtataggt catactcatg gctacttctt
    16561 ctgaagatgg tgacgacgtt agcatattgc taaaaatcaa ggccccacct actagggcaa
    16621 ctgcgactac tccaaggccg ccaaacaaag caattttcgc tttctttgtc tttaacataa
    16681 caaactcctt ttctttataa aacatactta ttttgtgttg tctatataat acacaaatac
    16741 aaaaacaaat gcaagttttt tcctaactat tttataaaaa gttcggcaat tttcccactt
    16801 acatttttgt aaggtaacgt agcggatttt tgattgacac acaaaaaaac gttacaatga
    16861 atatagttaa tgattttatt ggaggaaatt tatgaaagtg tttgatatta tcgctatcgg
    16921 aggtgggagc ggaggcatcg ctaccatgaa ccgggctgct atgtacggtg ccagggcagc
    16981 agttattgag ggaagctatc taggagggac ctgtgttaac cttggttgtg tacccaaaaa
    17041 aatcatgtgg tacggttctc aagtggctga agccattcac cactatggac cagagtatgg
    17101 ttttaccagc caggatgtaa aatttgattt tgccaccttg cgtaaaaatc gcgaagccta
    17161 tgttgagcgt tcacgcgcat cctacggtaa tacttttaac aataacggag tagaagttat
    17221 ccagggtttc gcacgttttg tggacaatca aacggttgaa gtcaatggtg aactgattcg
    17281 tgcaaaacac attgtcatcg caactggcgc caaaccggta gtccctgcta ttcctggtag
    17341 tgagctaggg attgtatctg acgatgtctt tgcatgggaa gaattacctt cttctgtggc
    17401 tgtgattggt gctggttata tcgctgtgga aatggccggt ctcctacatg gactcggtgt
    17461 ccaaactgac ctctttgttc gtggaaatcg ccctcttcgt agctttgata cctacattgt
    17521 tgatgccttg atggaagaaa tgcaacgaac caaccttcca ctccataccg ggaaaactcc
    17581 tgtcagtctt gaaaaaactg atgatggaca aatccagatt aactttgctg acggtagtag
    17641 ccatattgct cagaaggtcc tttgggcaat tggacgtaaa ccaaatattg acaaactcaa
    17701 cctagaagca actagtattc aacttacttc ttcaggacat atttctgtca atgaatacca
    17761 agaaacagct gtaccaggca tctatgccct cggtgatgtg actggtgaaa aagaattaac
    17821 acccgttgca atcaaggcag gtcgcctttt ggcagaacgt ctatttaaca ataaaccaac
    17881 cgcaaaaatg gattacacaa ccatcccaac tgtcgtcttt tctcaccccg ctatcggaac
    17941 cgttggtcta actgaggacg aagcgattgc ccaatacggt caggccaatg taaaagtcta
    18001 tacttcagcc tttacttcta tgtacactgc cctagaaaac aatcgccaaa tggctaagtt
    18061 taaattagta actgtgggag aaaatgaaaa agtcgttgga ctgcacggca ttggctatgg
    18121 tgtcgatgaa atgattcaag gattctcagt tgctatcaaa atgggagcta caaaagaaga
    18181 atttgatgcc gttgtcgcca tccatccgac aggttctgaa gaatttgtta ctatgcgtta
    18241 actcaattga aaaagtccag acatgaaggt cagcactgtc tggacttttt cttatggtaa
    18301 tatagcaatt gctcgcactg gtgaacccga agccttctcc caatgaggaa aagcgattga
    18361 aatcaatgca cctgttggtg gtacctgatt caagtttgcc aatacttcca actgataaat
    18421 atcttttgat aggagatagt attcttctgg taaacttcct ccgtgtttgg ctgcagatac
    18481 tcctgaatcg gtatccaatg tttcatgacc aactgctttc acctgacgtt cttcaatcaa
    18541 atattctaga gcttcatgac tccatcctgg tgtacgttga actccatctt cgtctagatt
    18601 acgaatggca tcttgactgg gccagcgctt tgaccaatcc gaacgaaagg caacaaaaga
    18661 ttctggcgct atcggaccat attcagcctc aaagtctaaa atatcctgct tagttatctc
    18721 atagtcatta ttttctataa cagcagctga tttatcaata acgtagagcg gcaggagtaa
    18781 atctttcaaa tcaatctcat caagataacg agctccttct acaaaatgaa tcggaggatc
    18841 aatatgggtt ccgtactgcc ccacaaccgt aaattgttcg acaaagaagc catccttatg
    18901 agtaaatagg gctttctttt cgagagctgg tagcgcaggg aaatgcgggc tcttttcatt
    18961 gatttggtga gtcaagtcta cccaagtttt agatttaaga gtacggtaaa tatcaagcaa
    19021 ttctgtcata gaaattctca ctttcttttt ttat
//
LOCUS       DBNFCX010000036        18907 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.036, whole genome shotgun sequence.
ACCESSION   DBNFCX010000036 DBNFCX010000000
VERSION     DBNFCX010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 18907)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18907)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18907
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.036"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            125..679
                     /locus_tag="AC1PJC_001141"
     CDS             125..679
                     /locus_tag="AC1PJC_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009911037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HIP6620133.1"
                     /translation="MNITLKKNLKTTIAGLVAGISLLTAGVVSAETYTVKSGDTLSEI
                     AETHNTTVEKLAEQNKITNLDFIHVGQVIELGDVTVKAVESSVEQTQSTSTSTATVTT
                     STYSSNLSAEDAAAKEWIAMKESSGSYDARNGIYIGRYQLTNTYLNGDYSPENQERVA
                     DAYVASRYGSWSAAKAFWLANGWY"
     gene            801..2183
                     /locus_tag="AC1PJC_001142"
     CDS             801..2183
                     /locus_tag="AC1PJC_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HIP6620134.1"
                     /translation="MKLQKRIFRLNMIMLIFSLVAMLGVSVYVVNSIYRNQETWQSTS
                     QKTAASQQSLEKFTGTDFVSLADTLSLNGAQLYVESNGEILFSNLTDDADELSEVTVS
                     STTHTSYVDGEVVISRKIASNGQIYYLYAMLEDLEEQQESQDFQAFLLQLFLVGGAGI
                     VIIVVLNFFFTRRLLGVVMRPLDELHSGVDRIQQGDYTVLLTYQGDKEFEELTQGFNQ
                     MQTSLLDAREKNQLYEQNRTQMVADISHDLRTPLTSIKGYAKGILDGIANTDEKRNQY
                     LTVIYQKSQVMEKLLEKLFAFSQLQTDKMPFDKVQLDLAIFLQSYVREKTEELVDEDI
                     RFSLEVSDGLPVEIDPIQFRRILDNLVDNARKYAAVKPLIISITGQMQEQEVVWTFTD
                     NGKGVEKNRLDLIFEEFYRADDTRQQVEGHGLGLAIVKNIMERLDGQVSVEATPGLRF
                     IFRLPRKDMK"
     gene            2180..2848
                     /locus_tag="AC1PJC_001143"
     CDS             2180..2848
                     /locus_tag="AC1PJC_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HIP6620135.1"
                     /translation="MIRILIAEDDVEIAYLERDYLEMQGYQVDLVHDGGLVEDQLKKE
                     DYALLMLDVMLPNKTGYDLCRDLRDKVDFPILMVTSKQETMDVVRGLGLGADDYISKP
                     FDPMELVARVKAHLARYQRFQKDNDQNELTVGNMTIFLDNWKVTLDGQEIKLPNREFE
                     LLVYLAKHPNRVFSKDHLFETIWGYDYVGDSATVAVHVNRLRDKLGADLIETVWGAGY
                     RLND"
     gene            2960..3565
                     /locus_tag="AC1PJC_001144"
     CDS             2960..3565
                     /locus_tag="AC1PJC_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3642 domain-containing protein"
                     /protein_id="HIP6620136.1"
                     /translation="MENNNQQQEIIEVAENKKTGVWESVKQKVTGMSKKSIILLSVGA
                     LALVTAGFVVAEVYENKLEALEDQIERQVGIADDDDNQQVIVQANASSASSVNTTFAS
                     QLATSYGVKLVDTSELDGTYTAASGNATYTLTVKGNQATLTEVDKDGDQDIEQVIFDL
                     DKKLAYIDGEADSYTLNGPTLTLTEIDANDTTLEKLTFTKQ"
     gene            complement(3605..4477)
                     /gene="sdaAA"
                     /locus_tag="AC1PJC_001145"
     CDS             complement(3605..4477)
                     /gene="sdaAA"
                     /locus_tag="AC1PJC_001145"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003941 - L-serine ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006565 - L-serine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent,
                     subunit alpha"
                     /protein_id="HIP6620137.1"
                     /translation="MFYTIEELVQQADNFSGNVAELMIATEIELTGRSREEILTIMSR
                     NLTVMKASIVDGLTESKSVSGLTGGDAAKLDAYMKSGKTLSDSAVLSAARNAMAVNEL
                     NAKMGLVCATPTAGSAGCLPAVLGVAIEKLNLTEEQQLDFLFTAGAFGLVIANNASIS
                     GAEGGCQAEVGSASAMSAAALTLAAGGTPYQASQAICFVIKNMLGLICDPVAGLVEVP
                     CVKRNAMGASYAMVAADMALAGIESKIPVDEVINAMYQVGSALPTAFRETAEGGLAAT
                     PTGRRLAQEIFGED"
     gene            complement(4490..5161)
                     /gene="sdaAB"
                     /locus_tag="AC1PJC_001146"
     CDS             complement(4490..5161)
                     /gene="sdaAB"
                     /locus_tag="AC1PJC_001146"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003941 - L-serine ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006565 - L-serine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent
                     subunit beta"
                     /protein_id="HIP6620138.1"
                     /translation="MTNLKFQSVFDIIGPVMIGPSSSHTAGAVRIGKIVSSIFGDEPT
                     EVEFQLYNSFAKTYRGHGTDVALVAGILGMDTDDPRIPDSLDIARERGIKVYWRVNKD
                     SNTPHPNTTRIIIKNDKKSISATGVSIGGGNIQVTELNGFSVNLNMNTPTIIIVHQDV
                     PGMIAKVTDVLSKYDINIAQMNVTREKAGEKAIMIIEVDARQCENSIAEIEKIPHLHN
                     VTFFN"
     gene            5376..6500
                     /gene="mnmA"
                     /locus_tag="AC1PJC_001147"
     CDS             5376..6500
                     /gene="mnmA"
                     /locus_tag="AC1PJC_001147"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HIP6620139.1"
                     /translation="MSIDNSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDD
                     TDENGFCTATEDYKDVAAVADQIGIPYYSVNFEKEYWDRVFEYFLAEYRAGRTPNPDV
                     MCNKEIKFKAFLDYAMNLGADYVATGHYAQVSRDEDGTVHMLRGADNGKDQTYFLSQL
                     SQEQLQKTMFPLGHLQKPQVREIAERAGLATAKKKDSTGICFIGEKNFKEFLGQYLPA
                     QPGRMMTVDGRDMGEHTGLMYYTIGQRGGLGIGGQIGGDNEPWFVVGKDLSKNILYVG
                     QGFYHESLMSTSLQASQVHFTRDMPEEFTLECTAKFRYRQPDSQVTVKVKGDKAEVIF
                     AEPQRAITPGQAVVFYDGQECLGGGMIDMAYKDGEACQYI"
     gene            complement(6543..6932)
                     /locus_tag="AC1PJC_001148"
     CDS             complement(6543..6932)
                     /locus_tag="AC1PJC_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000106206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HIP6620140.1"
                     /translation="MSTNLEIFNAYNNALIAGDFAALFETMADDIIWHQPGNHSTSGA
                     KIGKEVLGAHLATFAEKTNGTFKVVTNWVSDNDTLVAANVTFLGTRTDGEELNMNGID
                     LFRIEDGKIKEVWLFSADQKAEDAFWG"
     gene            7058..7384
                     /locus_tag="AC1PJC_001149"
     CDS             7058..7384
                     /locus_tag="AC1PJC_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HIP6620141.1"
                     /translation="MKKVSEYGICPFATTQKVLTGKWGLVIIYQLSTGTKRFNELQRL
                     IPGITQTMLTRHLRQLEEDRIISRTVYAEVPPRVEYSLTEMGEKFRSVLDAVEAWGLE
                     YIETLT"
     gene            7526..7981
                     /locus_tag="AC1PJC_001150"
     CDS             7526..7981
                     /locus_tag="AC1PJC_001150"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016817 - hydrolase activity, acting on
                     acid anhydrides [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009132 - nucleoside diphosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HIP6620142.1"
                     /translation="MDFRTRVDNQIFGVRATALLIKDGKIFLTKDSKGCYYTIGGAIA
                     VNEIAQDAVVREVKEELGVDSCVNQLAFVVENQFTHEGIDFHNIEFHFIVEPIGELPK
                     EMIEGKLKQACEWIELDKLVNLDVVPAFLAQELPNWNGQVKHIMNIKEK"
     gene            7984..9900
                     /gene="mnmG"
                     /locus_tag="AC1PJC_001151"
     CDS             7984..9900
                     /gene="mnmG"
                     /locus_tag="AC1PJC_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HIP6620143.1"
                     /translation="MTHTFAENYDVIVIGAGHAGVEAGLAASRMGCKTLLATINLDMV
                     AFMPCNPSIGGSAKGIVVREIDALGGEMGRNIDKTYIQMKMLNMGKGPAVRALRAQAD
                     KAEYAAEMKRTVERQENLTLRQTMIDEILVEDGKVIGVRTATNQKFSAKAVVVTTGTA
                     LRGEIIIGDLKYSSGPNNSLASITLADNLKELGLEIGRFKTGTPPRVNAHTINYDETE
                     IQPGDEKPNHFSFLSKDEDYLQDQIPCWLTYTNATSHEIINSNLHRAPMFSGIVKGIG
                     PRYCPSIEDKIVRFADKERHQLFLEPEGRNTDEIYVQGLSTSLPEDVQQDLIHSIKGL
                     ENAQMMRTGYAIEYDMVMPHQLRATLETKKISGLFTAGQTNGTSGYEEAAGQGIIAGI
                     NAALKVQGKPELILKRSDGYIGVMIDDLVTKGTVEPYRLLTSRAEYRLILRHDNADMR
                     LTEIGRQVGLVDDERWQVFQIHKNQFDNEMKRLESIKLKPIKETNEKVVAMGFKPLTD
                     ALTAKEFMRRPDVTYADAVAFIGPAAEDLDAKTIELIETEVKYEGYIAKALDQVEKMK
                     RMEEKRIPADIDWDDIDSIATEARQKFKLISPETIGQASRISGVNPADISILMVYLEG
                     RSRSISKNKSKDSH"
     gene            10007..11968
                     /locus_tag="AC1PJC_001152"
     CDS             10007..11968
                     /locus_tag="AC1PJC_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HIP6620144.1"
                     /translation="MKRFRFSTIHFVMIGVILFGLVALVHRLFPIGASTVFALLISLL
                     VLIALFIYQKHSYEFSELEQIEYLNNQANSGLMMLLDKMPVGVIKVRPDSNQVEWFNP
                     FAELIFAQENGEFDQKKLREIIDVGLDEERIYANFSGKRYAVNVDFDQGLFYFFDAST
                     EYSATNSLIGSRPVIGIISVDNYDELEDAVTDSQISQVNSFLAQFVSEFCHDYGIYYR
                     RGTMDRFYFFTDYAVLEKLIENKFSVIDKFREEAKKLDLGLTLSMGLAYGNENHHQIG
                     QVALQNLNMAEVRGGDQVVVKENDESKQPLFFGGGSASSVKRTRTRTRAMMTAVSDKL
                     KSVDAVFVVGHRNLDMDALGSAVGMQYFAQNIMNNAYTVYNPDEMAPDIARAIKKLSD
                     ENCSNLLTVEEAMKMVTFQSLLIMVDHSKIGLTLDKDFYEQFTQVVVVDHHRRDTDFP
                     NNAVLTYIESGASSASELVTELIQFQNDKHHKLNRIQSSLLMAGIMLDTKNFTSRVTS
                     RTFDVASYLRTRGSDSLEIQQIAATDFEEYRQINELILSGQRIESNVVIACADDTKEY
                     DNIIPSKAANTILDMAGIEAVFVVTRNTKGYVSISARSHSKINVQRIMEEMGGGGHFN
                     LAAAQVYDQTIAEVCEKLTDKIREEINGN"
     gene            11979..12431
                     /gene="rplI"
                     /locus_tag="AC1PJC_001153"
     CDS             11979..12431
                     /gene="rplI"
                     /locus_tag="AC1PJC_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HIP6620145.1"
                     /translation="MKVIFLADVKGQGKKGEIKEVPTGYAQNFLIKKNLAKEATNQAI
                     SALRGQEKSKEKAHAEMIAEAEAIKAKLAEEATLVKFVEKVGPDGRTFGSITSKKIAE
                     ELDKQFGIKIDKRHIQLDHPIRAIGLIDVPVKIYQDVTGIINLSIKEA"
     gene            12463..13818
                     /gene="dnaB"
                     /locus_tag="AC1PJC_001154"
     CDS             12463..13818
                     /gene="dnaB"
                     /locus_tag="AC1PJC_001154"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HIP6620146.1"
                     /translation="MAELDELRVQPQDILAEQSVLGAIFLDEGKLVFVREYIEAEDFF
                     KHAHKLIFKAMIALSDRNEAIDATTMRNYLVNHGDLENIGGLAYLAEIISSVPTAANA
                     EFYAKIVAEKSNLRKLIARLTDAVNQAYEGADGSDDIIANAEKALIDVSEGASRSGFK
                     RIDDVLNINFDNLETRAKQTSDITGIATGYPALDAMTTGLHEEELIILAARPAVGKTA
                     FALNIAQNIGTKLGLTVAIFSLEMGAESLVDRMLASEGVINSRAIRTGHLTQEEWNKY
                     MVAQANLARASIYIDDTPGIKITEIRSRSRKLAQETGNLGLILIDYLQLITGTGRENR
                     QQEVSEISRQLKILAKELKVPVIALSQLSRGVEQRQDKRPVLSDIRESGSIEQDADIV
                     AFLYRDDYYERGEQEDGGIPNNTVEVIIEKNRSGARGTVELMFQKEYNKFASISKRED
                     G"
     gene            13822..14073
                     /locus_tag="AC1PJC_001155"
     CDS             13822..14073
                     /locus_tag="AC1PJC_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018164720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Veg family protein"
                     /protein_id="HIP6620147.1"
                     /translation="MSDAFTDVAKMKQIKQDIKDHEGQIVELTLENGRKREKNKQGRI
                     VEVYQSLFIVEFEDPNNTFVESYTYSDILTEKILIHYLD"
     gene            14278..14889
                     /gene="rpsD"
                     /locus_tag="AC1PJC_001156"
     CDS             14278..14889
                     /gene="rpsD"
                     /locus_tag="AC1PJC_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014407971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HIP6620148.1"
                     /translation="MSRYTGPSWKQARRLGLSLTGTGKELARRNYVPGQHGPNNRSKL
                     SEYGLQLAEKQKLRFSYGLGEKQFRNLFVQATKIKQGTLGFNFMLLLERRLDNVVYRL
                     GLATTRRQARQFVNHGHILVDGKRVDIPSYRVEVGQVISVREKSIKVPAILEAVEATL
                     GRPAFVSFDAEKLEGSLTRLPERDEINPEINEALVVEFYNKML"
     gene            14955..15404
                     /locus_tag="AC1PJC_001157"
     CDS             14955..15404
                     /locus_tag="AC1PJC_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HIP6620149.1"
                     /translation="MWRKYSLLVVLTILVVGGAFFLSQSAAAPNESDYVKAVKSYQAI
                     SIDEVEQKIQNEEEFILYIGRETCPYCRDFVPKLTEAVERSRATIYYLDSESDPNGKI
                     QQFRQSQGLATVPSLTYYKSGKLSGILRKGSQATLSEIENFLALQGQ"
     gene            15538..17052
                     /locus_tag="AC1PJC_001158"
     CDS             15538..17052
                     /locus_tag="AC1PJC_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavocytochrome c"
                     /protein_id="HIP6620150.1"
                     /translation="MKKKAWLGLLMSLLAVLFLVACGGKSEKTATSSSSTTSSSEEAV
                     SGASEKVYTDPSELKDSYDVIVVGSGGAGMSAAISAKDAGASVALLEKMPVIGGNTAK
                     SSAGMNASQTKFQEAEGIADSNDKFYEETLKGGKGTNDPELLRYLVDNSASAIDWLDG
                     MGITLSNLTTTGGMSEKRTHRPADGSAVGGYLVNGLYHNLVEREVPIFVNADVTKLQD
                     KDGAVTGVEVKIAGETKKISAKAVVLATGGFGADLEMVAKLNPALKGYVTTNQEGSTG
                     DGIALAESEGAATVDMEQIQIHPSVEQETSYLITEAVRGEGAILVNSKGERFVNELET
                     RDKVSAAINSLDPNYAYVIFDDALKDRVKAIAQYEEKGLVKTGATLADLAKEIGVPAD
                     ALQTTLDTWNKAVADKNDAAFGRTSGMDHALNTGSYHAIKVAPGIHHTMGGVKINTNT
                     EVLKTDGSAISGLYAAGEVTGGVHGQNRIGGNAVADIIVFGRQAGEQAAGFAKK"
     gene            17138..18484
                     /locus_tag="AC1PJC_001159"
     CDS             17138..18484
                     /locus_tag="AC1PJC_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HIP6620151.1"
                     /translation="MKKKIVLLLGAIAVIVLTWSAIAGQRQQSYAEAELRDQDKIWII
                     TDLHYLSQDLFDDGEAFSYIEKTAAGKDLRYGKERMEALVEQVEREHPSLLLVSGDLT
                     LNGEKQSMVELEQYFTRIEEKGTEVLVIPGNHDIASGWARAFKGDQQIVTDQVTAQQF
                     AELFAHHGYQQASSRDKASLSYLAKPFSNAWFLMIDSNIYSDSYSKGAPPTNGRIKKE
                     TLEWIEIQLRSAKEAGVSLIPVVHHNVLQQHAMLSKGYTLDNAADLKALFNQYGIQFG
                     FSGHTHSQNIVKEDLGQVNYTEVVNGAFSIYPAIIGQLSLDDTSIHYQKTQLDMASWA
                     EKHQPSDPNLQDHVTYLQTVFDNTSDIMVHNVLNDERWYDGETADAISQFIMPANRAY
                     FSGEKLDQTWLNEKVFSSQAYQTLQAASPRSFLADYLDVIIKRSQSRDVEQVTVSK"
BASE COUNT         5577 a         3407 c         4480 g         5443 t
ORIGIN      
        1 acgctagaaa tagcgttttt attgtctaat ctcaatttgt ctgtaatatt tgtaacaatt
       61 tcacaaagtc taagtaatag ttagagggta tgatagacac atgacagaaa ggaatgtgac
      121 tattatgaac attacattaa agaaaaactt aaaaacaact attgctggtt tggtagcggg
      181 aatctccctt ttgactgcgg gtgtagtcag tgcagaaacc tatactgtaa agtctggtga
      241 taccctgtct gaaattgctg aaacacacaa tactactgtt gaaaaattag cagagcagaa
      301 taagattacc aacttagatt ttatccatgt cggtcaagtt atcgaattgg gtgatgtgac
      361 agtgaaggca gtagagagtt cagttgaaca aactcaatca acatcaactt ctactgcaac
      421 agtaacaact agcacatatt cttcaaactt gagtgctgaa gatgcagcag caaaagaatg
      481 gattgcaatg aaggaatcaa gcggtagcta tgatgcccgt aacggtatct acattggtcg
      541 ttaccagttg acaaatactt acttgaatgg tgattactca ccagaaaacc aagagcgtgt
      601 ggcagatgct tatgttgcta gtcgctatgg ttcatggtct gcagccaagg ctttctggtt
      661 ggcaaatggt tggtactaag ataaattaga agaggtctag cacgatgcta gacttttttc
      721 tattgttgaa agttgtctag ctttacagat agggttgttt tgtttataat tgtgaaaaaa
      781 ttgactagaa aagaagaact atgaaattac aaaaacgaat ttttcgatta aatatgatta
      841 tgcttatttt ttccttggtt gcgatgctgg gggtaagtgt ttatgtggtt aatagcattt
      901 atcgtaacca agaaacatgg cagtccacta gccagaagac agcagcaagt caacaaagtc
      961 tagagaagtt tacggggaca gattttgtaa gtttagctga tactttatcc ttgaatgggg
     1021 ctcaactgta tgtagaaagt aatggggaga ttttattttc aaaccttact gatgatgctg
     1081 acgagctttc agaagtgacg gtgtcgtcta cgacccatac ttcttatgtt gatggtgaag
     1141 ttgtcattag tcgaaagatt gcatcaaacg gtcaaatata ttatttgtat gccatgttag
     1201 aagatttgga ggagcaacag gaaagccaag attttcaagc ctttctattg caacttttct
     1261 tggttggtgg ggcaggtatt gtcatcatag tggtgcttaa tttcttcttt actcgccgtc
     1321 tcttaggtgt ggtcatgcgg cctttggatg aattgcatag cggtgtagac cgtatccagc
     1381 agggagatta tacagtactt ctgacctatc aaggtgataa ggaatttgaa gaattgaccc
     1441 aagggttcaa tcaaatgcag acttctttgt tagatgcccg tgagaaaaat caactgtatg
     1501 aacaaaatcg aacccagatg gtcgcagata tttcgcatga tttacggact cccttgactt
     1561 ctatcaaagg ttatgccaag ggaattttgg atggtattgc caatacggat gaaaaacgta
     1621 atcagtattt gactgttatc tatcaaaaat ctcaggtgat ggagaaattg ttggaaaaat
     1681 tatttgcttt ttcacaattg cagacagata aaatgccatt tgataaagtc cagcttgatt
     1741 tggctatctt tttacagtcc tatgtaagag agaaaactga ggaattagta gatgaggaca
     1801 ttcggtttag tttggaagta tcggatggat tgccagttga gattgatcca attcaatttc
     1861 gtagaattct agataatctg gtggacaatg cacgaaaata tgctgctgta aagcccctga
     1921 taatcagcat tactggacaa atgcaagagc aagaagttgt ttggactttt acagataacg
     1981 gaaaaggtgt agaaaagaat agacttgact tgatttttga agaattttac agggcagacg
     2041 ataccagaca gcaagtagaa ggccatggtc tggggttagc gattgtaaaa aatattatgg
     2101 agagactgga cggccaggta tctgttgagg caactccagg tcttcgattt atctttagat
     2161 tacctagaaa ggatatgaaa tgatacggat tttaatcgca gaagacgatg tagagattgc
     2221 ttatttggag cgagattatc tggaaatgca gggctaccaa gtagatttgg tacatgacgg
     2281 tggtcttgta gaggaccaac tcaaaaaaga ggattatgct cttttaatgc tggatgtcat
     2341 gctcccaaat aaaactggct acgatctttg tcgtgattta cgggataagg tggatttccc
     2401 tattttgatg gttacatcca agcaagaaac tatggatgtg gtgagagggc taggcttggg
     2461 agcggatgat tacatcagca aaccttttga tcccatggag ttggtggcgc gtgtaaaggc
     2521 tcatttggct cgctaccagc gttttcaaaa ggataatgat cagaatgaat taacagttgg
     2581 gaatatgact attttcttgg ataattggaa ggtgactttg gatggtcagg aaatcaaatt
     2641 gcccaatcgt gaatttgaat tgctggttta tctagcaaaa caccctaacc gagtattctc
     2701 taaagatcac ttgtttgaaa ccatttgggg atatgactat gttggagata gtgcgacagt
     2761 tgctgttcat gtcaatcggc tccgagataa attgggagcg gatttgattg agactgtctg
     2821 gggagcaggc tatcgtctta atgattaatt tataagtgtt tagaatttgt ttagaaagtt
     2881 tctctaaagt gttaaaacct atcctctata atagacttat cagcaagagc tgaagaaaac
     2941 aagttaaaaa gaggacaaaa tggaaaataa caatcaacaa caagaaatta ttgaagtggc
     3001 agaaaataag aaaacaggtg tctgggaatc agtcaaacag aaggttacag gcatgagtaa
     3061 gaaatcgatt atcttattgt cggtaggtgc cttggcactt gtgacggctg gttttgtcgt
     3121 agcagaagtt tatgaaaata aactagaggc attagaagat cagattgagc gacaagttgg
     3181 aattgcagat gatgatgaca atcaacaggt aatagtacaa gctaatgcat catcagcctc
     3241 atcagtaaat acaacttttg ctagtcaact agcaacaagt tacggtgtaa agttagttga
     3301 cacctctgag ctagatggta cttatacagc agcatctgga aatgccacct acacgttgac
     3361 tgtaaaaggg aatcaagcaa ccttgacaga agttgacaaa gacggagatc aagatattga
     3421 acaagttatc tttgatttag ataaaaaact tgcctacatt gatggcgaag cagatagtta
     3481 taccttgaat ggtccaactc ttactttgac agaaattgat gccaatgata caaccttaga
     3541 gaaactaaca ttcacgaaac aataagaaaa ggaccgttag ggtccttttt ggtttacatt
     3601 attgtcaatc ttctccaaaa atttcttgag caaggcgacg acccgtcggt gtagctgcaa
     3661 ggcctccttc ggcagtttca cggaaggcag ttggtagggc agatcccact tggtacatag
     3721 cgttgatgac ttcatcaaca gggatttttg attcgatacc tgctagtgcc atatcggcag
     3781 ctaccatggc gtagcttgct cccattgcat tacgtttgac acatgggact tctaccagac
     3841 cagcgacggg atcgcaaatc agacccagca tatttttgat gacaaagcag atggcttggc
     3901 tggcttggta gggagttcca cctgctgcta gtgtcagggc tgcggcagac atagcagagg
     3961 cagatccgac ttctgcctga cagcctcctt ctgcacctga gatggaggcg ttgttggcga
     4021 taactagtcc aaaggctcca gctgtaaata ggaagtcaag ttgctgttct tctgtcaaat
     4081 tgagcttttc aatagcaact cctagcacag ctggtagaca gcctgcagat cctgctgtcg
     4141 gagtggcaca gaccaagccc attttagcat tcaattcatt aacggccatg gcatttcttg
     4201 cggcggatag gacagcggaa tctgataggg ttttaccaga tttcatatag gcatctaact
     4261 tggcagcatc gcctcctgtt aaaccagata cggatttgct ttcagtaagt ccatctacga
     4321 tggaggcttt cataactgtc aagtttcttg acataattgt caatatttct tcgcggctac
     4381 gaccggtcaa ctcaatttca gtcgcgatca tgagttcagc tacattacca gaaaagttgt
     4441 ctgcttgctg aactaattct tcgatagtat aaaacatgtc tttctctttc tagttgaaga
     4501 aggttacatt gtgcaggtgt ggaatttttt caatttctgc aatagaattt tcacattggc
     4561 gagcatccac ttcgataatc ataatggctt tctcgccagc tttttcacgt gtcacgttca
     4621 tttgggcgat attgatgtca tacttagaaa ggacatcggt cactttcgca atcataccag
     4681 ggacatcttg gtgaacaata ataatagttg gcgtattcat atttagattg acagagaagc
     4741 cgttgagctc tgtcacttga atgtttcccc caccgatgga aacgcctgtg gctgagatgg
     4801 attttttatc gttttttatg atgattctgg tggtattggg atgtggggta ttgctgtcct
     4861 tgttgacacg ccagtaaacc ttaatgcctc gttctcttgc aatatcaaga gagtcaggaa
     4921 tgcggggatc atccgtatcc atgcccagaa tacctgctac caaggctaca tccgtaccgt
     4981 gaccacgata ggtcttggca aaggaattgt agagttgaaa ttccacctct gtcggctcat
     5041 cgccgaagat ggaagacaca attttcccaa ttcggaccgc cccagctgtg tgactagaag
     5101 atggaccgat cataacaggt ccaataatat caaagaccga ctgaaatttt aagtttgtca
     5161 tagtaatcct cacgtttttc ttggtactat tatatcaaat tttccggtta gagaatatgc
     5221 ctagatgaat gtgttttctt atgttaaaat tctatcgctt accctttttg tatggtataa
     5281 tacaagttgt tcaaaatcgt caatcgtttt tggataatca aattttggaa tacgaccttc
     5341 aaatcgttat ttctacgaaa agatgggaga agattatgtc aattgacaat tctaaaaccc
     5401 gtgttgttgt cggtatgagt ggcggtgtgg attcatcggt tacggctctc ttgctcaaag
     5461 agcagggcta cgatgtgatc ggcatcttca tgaaaaactg ggacgacacg gatgaaaatg
     5521 gtttctgtac agcaacagaa gattacaagg atgtggctgc tgttgcagac caaatcggca
     5581 ttccttacta ctctgtcaac tttgaaaaag agtactggga ccgcgtattt gagtactttt
     5641 tagcagagta tcgggcaggt cgcacaccca atccagatgt catgtgtaac aaggaaatca
     5701 agtttaaggc tttcttggat tacgctatga acctgggtgc ggactatgtg gcgacagggc
     5761 actacgctca ggtgtcacgc gacgaggacg gcaccgttca tatgctgcgt ggggcagata
     5821 atggtaagga ccagacctac ttcctcagcc aactctcaca ggaacagctg cagaaaacca
     5881 tgtttccgct cggccattta caaaagcctc aggtgaggga aatagcagag cgagcaggct
     5941 tggcgacagc taaaaagaaa gactcgacag gcatctgctt tatcggtgaa aagaacttca
     6001 aagaattttt aggacagtat ttgccagccc agcccggtcg gatgatgacc gttgacggtc
     6061 gtgacatggg agagcataca ggcctcatgt actatacaat cggtcagcgg ggcgggcttg
     6121 gtatcggagg acaaatcgga ggggacaatg agccttggtt tgttgtcgga aaagacctgt
     6181 caaaaaatat cctctatgtc ggacaaggct tctatcatga gtccttgatg tcaacttctt
     6241 tacaggctag tcaagttcac tttacacgtg atatgcctga agaattcaca cttgagtgta
     6301 cagctaagtt ccgctaccgt caaccagaca gtcaagtaac tgtcaaggta aaaggtgata
     6361 aggcagaagt catctttgca gagccacaac gggccatcac accagggcaa gccgtagttt
     6421 tctacgacgg acaagaatgc ttgggcggag gtatgatcga catggcctat aaagatggag
     6481 aggcttgtca gtatatttaa tcaaaaataa aagcttagca ccctcatgct aagcttttta
     6541 tcttatcccc agaaagcatc ttcggctttt tggtcggctg agaagagcca aacttcctta
     6601 attttgccat cttcaatacg gaaaaggtcg atgccattca tgtttagttc ttcaccatct
     6661 gttcgagtac cgaggaatgt tacgttagcg gcaacaagag tatcattatc ggatacccag
     6721 tttgtcacta ctttgaaagt tccatttgtt ttttcggcga aagttgctag atgtgctccg
     6781 agtacttcct taccaatttt agcaccagat gttgaatgat ttccgggttg atgccagata
     6841 atgtcgtctg ccattgtttc aaaaagagct gcaaaatcac cagcgatgag agcattgtta
     6901 taggcattaa aaatttccaa gtttgttgac atttgatgtc ctccaatttt tttgatatag
     6961 tacaattata gtccaatcaa tcaattatgc aagtaggtac ttttgcattg gttggtatca
     7021 aaagcgatac tattgtgata aataaaggag aagttttttg aaaaaagtta gtgaatatgg
     7081 tatttgtcct tttgcaacaa cgcaaaaagt cttgactggt aagtggggat tggttattat
     7141 ctaccaactc agtacaggaa cgaaacgctt caatgaattg cagcgactga ttccaggtat
     7201 tactcaaacc atgttaacaa ggcaccttag acaattggag gaggatcgca ttattagtcg
     7261 tacggtctat gcagaagtcc cccctcgtgt agagtacagc ttgaccgaaa tgggcgaaaa
     7321 atttcggtcg gtgctggatg ctgttgaggc ttggggctta gaatatattg aaacgttaac
     7381 gtaacaccag atttgaaatt ctacaaatct tttgctaaaa taagagtaac aatcatcatg
     7441 atggtcaaag ctcatgggaa ttgtaggctt ttttgtcctg cagttttcga gagttttggc
     7501 tattttttgc gattggggag agaagatgga tttcagaacc agagttgaca accagatttt
     7561 cggtgttcgt gccactgcat tgcttataaa agacgggaaa atatttctca ctaaagactc
     7621 taagggttgt tattatacca ttggtggtgc aattgcagtc aacgaaattg cacaagatgc
     7681 ggttgttcgg gaagtcaaag aagaattagg ggttgacagt tgtgtcaacc aactagcctt
     7741 tgtcgttgaa aatcagttta cacatgaagg catagatttt cacaatatcg aatttcattt
     7801 tatcgttgag cctattggag aattgcccaa ggagatgatt gaagggaagt tgaaacaagc
     7861 ttgtgaatgg attgaacttg acaagcttgt caacctagat gtcgtaccag cttttctggc
     7921 tcaagaattg ccaaactgga atggacaagt caaacacatc atgaacataa aggagaaata
     7981 aaaatgacac acacatttgc agaaaactac gatgtcatcg tgattggagc agggcacgcg
     8041 ggtgtagaag caggcttggc agccagccga atgggctgta agaccttgct tgcgacgata
     8101 aacttggata tggtggcctt tatgccctgt aatccctcca ttggtggctc tgccaagggc
     8161 attgtggtac gagaaatcga cgccctgggt ggcgaaatgg gccgcaacat tgacaagacc
     8221 tatatccaga tgaagatgct caatatgggt aaggggccag ctgttcgtgc cttgcgggct
     8281 caggcggata aggcagagta tgcagcggag atgaagcgga cggtggagcg tcaggaaaat
     8341 ctgaccctgc gtcaaaccat gattgatgag attttggtgg aggacggcaa ggttatcggt
     8401 gtccgcacgg ctaccaacca gaaattctcc gccaaggcag ttgtggtgac gacgggtaca
     8461 gccctgcgtg gcgagattat catcggtgac ctcaagtatt cgtcaggccc taacaatagc
     8521 ctagcttcta tcacgctggc ggataatctg aaagaattag gacttgaaat tggtcgtttc
     8581 aagacaggga caccaccgcg tgtcaatgcc cacaccatta attacgacga aaccgagatt
     8641 caaccaggcg atgaaaagcc aaatcacttt tcattcttgt ccaaggacga ggattatttg
     8701 caggaccaga tcccttgctg gttgacctat accaatgcga ccagccatga gattatcaac
     8761 agcaatcttc atcgggcgcc tatgttttcg ggcattgtca aggggattgg gccccgttat
     8821 tgtccgtcaa tcgaggacaa gattgtgcgt tttgccgaca aggaacgcca ccaacttttc
     8881 ctagagccag aaggtcgcaa cacagatgaa atctatgttc aagggctgtc aaccagtctg
     8941 ccagaagatg tgcagcagga cttgattcac tccattaaag gcttggaaaa tgcccagatg
     9001 atgcggacgg gctatgctat tgagtacgat atggttatgc ctcatcaatt gcgggcgacg
     9061 ctggaaacta agaagatttc tgggctcttt acagcaggtc agaccaacgg aacatcaggt
     9121 tatgaagaag cagcaggtca gggaattatc gctggtatca atgcagccct taaggtacag
     9181 ggtaagcctg agttaatttt gaaacgaagc gacggctaca ttggtgttat gattgatgac
     9241 ctggtaacca agggaacggt ggagccttat cgtctcttaa ccagtcgggc agaataccgc
     9301 ctgattctgc gtcatgacaa tgctgatatg cgactgacgg aaatcggtcg ccaggttggc
     9361 ttggtagatg atgaacgctg gcaggttttc cagattcaca aaaaccagtt tgacaatgaa
     9421 atgaaacgct tggagtctat caaactcaag ccaatcaagg aaaccaacga aaaagttgtt
     9481 gctatgggat tcaagcctct gacggatgcc ctgactgcca aggaattcat gcgtcgtcca
     9541 gatgtgactt acgcagatgc ggtagccttt atcggtcctg cggcagagga tttggacgcc
     9601 aagaccattg aattgattga aacagaggtc aagtacgagg gctatattgc caaggccttg
     9661 gatcaggtgg agaagatgaa acgtatggaa gaaaaacgca ttccagccga cattgattgg
     9721 gatgatattg actccatagc aacggaggct cgtcagaaat tcaagctgat ttcaccagaa
     9781 accattggtc aggctagtcg gatttccggt gtcaatccag cggatatatc cattctcatg
     9841 gtttacttgg aaggacgcag tcgttccatt tctaaaaaca aatcaaagga cagtcactaa
     9901 ggctgttctt ttcgctgtat gtcagctata tgtcaactac tttaaaatca tttgaaaagt
     9961 agctttttta ctgaatttat ggtagaatgg caggcagagg ttagtgatga aaagatttcg
    10021 attttcgaca attcactttg tcatgatagg tgtcatttta tttgggttgg tggctcttgt
    10081 ccaccgactt tttccaattg gtgccagtac agtttttgcg ctactcatca gtctattggt
    10141 gttgattgcg ctgtttattt atcaaaaaca ttcttatgaa tttagtgagc tagaacagat
    10201 tgaatatctc aataatcagg ctaattctgg tttgatgatg ctcttggata aaatgccagt
    10261 gggagttatc aaagttcgac cagatagtaa tcaggtagaa tggtttaatc cctttgctga
    10321 gctgattttt gctcaagaaa atggtgagtt tgatcaaaaa aaactacgtg aaattattga
    10381 cgttggtctg gatgaggagc gaatttatgc gaacttttca ggcaagagat atgctgttaa
    10441 cgttgatttt gatcaagggt tattttactt ttttgatgcg tcaacagagt attcggcgac
    10501 aaatagtttg atcggaagcc gtcctgttat agggattatt tcagttgata actatgatga
    10561 gcttgaggat gctgtaacgg attctcaaat tagccaagtc aattccttct tggctcaatt
    10621 tgtttcggaa ttttgccatg attacggtat ctactaccga cgcggcacaa tggatcgatt
    10681 ctatttcttt acagattatg ctgtgttgga aaaattgata gagaataagt tttcagttat
    10741 tgataagttc cgcgaggagg ctaaaaagtt agatttaggt ttgactttga gtatgggatt
    10801 ggcgtatggt aatgaaaatc atcaccaaat cggacaggtt gcgctccaaa atctcaatat
    10861 ggctgaggtt cgtggtggag accaggttgt ggtcaaggaa aatgatgaga gtaaacagcc
    10921 acttttcttt ggtggtggct cagcttcttc cgttaaacga acacgtacgc ggactcgtgc
    10981 tatgatgact gctgtatcag ataaactcaa atcggttgat gctgtttttg tggtgggaca
    11041 tcgtaattta gatatggacg cgcttggatc cgcggtcggt atgcagtact ttgctcaaaa
    11101 tattatgaac aatgcctata cggtgtataa tccagatgaa atggcaccgg atattgcacg
    11161 tgctatcaag aagttgagtg atgaaaattg ttctaatttg ctaacggttg aggaagccat
    11221 gaagatggtc actttccagt cgttgttaat catggtagat cattcaaaga ttggcttgac
    11281 tttggataag gatttctatg aacaatttac ccaagttgtg gtggttgatc atcatcgtcg
    11341 cgatacagat ttcccaaata atgcagtttt gacttatata gagagtggtg ctagttctgc
    11401 gagtgagtta gtaacggaat taattcagtt ccagaatgac aaacaccata agcttaatcg
    11461 cattcaatct agtttattga tggctgggat tatgcttgat acaaaaaatt tcacatctcg
    11521 tgtgaccagt cgtacttttg atgtggctag ttacttgcgg actcgtggta gcgatagctt
    11581 ggaaattcag cagattgctg cgacagattt tgaggaatat cgtcaaatca atgaactgat
    11641 tttaagtggg cagagaattg agtccaatgt tgttattgcg tgtgcagatg atactaaaga
    11701 atacgataat attattccga gcaaggctgc caatacaata ttggacatgg caggaattga
    11761 ggcggtattc gttgtaacaa gaaataccaa agggtatgta tctatttctg caaggagtca
    11821 tagtaagatc aatgttcaac gcattatgga agaaatgggt ggaggtggcc actttaacct
    11881 agctgccgct caggtatatg accagacaat cgcagaagta tgtgaaaagt tgacggataa
    11941 aatccgcgaa gaaataaatg gaaattagga gaacagatat gaaagtaatc tttttagcag
    12001 atgttaaagg tcaaggtaaa aagggtgaga ttaaggaagt tccaacaggt tacgcccaaa
    12061 atttcttgat caagaaaaat ttggctaagg aagcaacaaa tcaagcgatc agcgcccttc
    12121 gtggtcagga aaaatctaag gaaaaggctc atgcagagat gattgcagaa gcagaggcta
    12181 tcaaggctaa gctggctgag gaagctactt tagtgaaatt tgtcgaaaaa gttggtccag
    12241 atggtcgtac ctttggttct attaccagca agaaaattgc tgaagaattg gacaagcaat
    12301 ttggcatcaa gattgataaa cgccatattc agctggatca cccaattcgt gcgattggtc
    12361 tcattgatgt accagttaaa atctatcaag atgtaacagg catcattaat ttgagtatta
    12421 aggaagctta attatttatc tagccagtga ggaggtgaga tcttggcaga gttggatgaa
    12481 ttgcgggtgc aaccgcagga tattctagct gaacaatcgg tattaggagc tattttcctt
    12541 gatgaaggca agctggtctt cgttcgtgaa tacatcgaag ctgaagattt tttcaaacat
    12601 gctcataagc taatttttaa agctatgatt gctctttctg atagaaatga ggcaattgat
    12661 gcgactacca tgcgtaacta tttagtgaac catggtgatt tggaaaatat tggtggcttg
    12721 gcctatttgg ctgaaatcat tagttccgtg ccgacggcag ccaatgcgga attctatgcc
    12781 aagattgttg ctgaaaagtc taatctccgt aaactgattg cccgtttgac ggatgcagtt
    12841 aatcaagctt atgagggtgc ggatggttca gatgacatta ttgccaatgc tgaaaaagct
    12901 ttgattgatg tcagtgaggg agccagtcga agtggtttta agcggattga tgatgtcttg
    12961 aatatcaact ttgacaacct tgaaactcgt gctaagcaga cgtcggatat tacagggatt
    13021 gcaactggtt atcctgctct tgatgccatg acaacgggtc tgcatgagga agagttgatt
    13081 attcttgcgg ctcgtcctgc ggttggtaag acggcatttg ctctcaatat tgcacaaaat
    13141 atcggtacaa aactgggttt gacagttgcc atcttctctt tggagatggg tgcagaaagc
    13201 ttggttgacc gtatgctcgc ttctgaggga gttatcaatt cgagggctat tcgtacgggg
    13261 catttaacgc aggaagaatg gaataagtac atggtggctc aagctaacct ggctcgggct
    13321 agtatctata ttgatgatac accaggtatc aagattacag agattcgttc gcgttcacgt
    13381 aagttggctc aggaaacggg caatctgggc ttgatcttga ttgactatct tcaattgatt
    13441 acgggaacag gtcgtgaaaa ccgacaacaa gaggtttctg agatttcccg tcagttgaag
    13501 attttggcaa aggaattgaa agtaccagtt atcgccctca gtcagttgtc tcgtggagtt
    13561 gagcaacgtc aggataagag acctgttctg tctgatattc gtgaatctgg gtctatcgag
    13621 caagatgcgg atattgttgc cttcttgtat cgtgatgatt attatgagcg cggtgagcag
    13681 gaagacggtg gtattcccaa taatacggtt gaagtcatca tcgagaaaaa ccgttccggt
    13741 gcgcgtggta ccgtggaatt gatgttccaa aaagaataca ataaatttgc aagtatttcc
    13801 aagagagagg atggatagag aatgagtgat gcatttacag atgttgctaa aatgaagcaa
    13861 atcaaacaag atattaaaga ccatgaggga caaatcgttg aattgactct tgaaaatggt
    13921 cgtaagcgtg agaagaataa gcaggggcgt attgtggagg tttatcagtc tctctttatc
    13981 gttgaatttg aagatccaaa caataccttt gtggaatctt atacttactc agacattttg
    14041 acagaaaaga ttttgattca ttatttggat taatcgctat ataaggcttt acagagcctt
    14101 ttttttgtgc tatactaatc ttcgtgcgaa ataacagcag agcaaaatga agctcgtcaa
    14161 cagaaggtca gcaagaagag taatcgttgc tgtttcgatg aaggcctcct gcacgaatca
    14221 ggtttactta aaacgttatt tcctacagaa tacttatttt ttaggaggac ataacaaatg
    14281 tcacgttata caggaccatc ttggaaacaa gctcgtcgtc ttggcttgtc attgacaggt
    14341 acaggtaaag aattggcacg tcgtaactac gtaccaggtc aacacggacc aaacaaccgt
    14401 tctaaattgt cagaatacgg tttgcaattg gctgagaaac aaaaattgcg tttctcttac
    14461 ggtttgggtg aaaaacaatt ccgtaacttg ttcgtacaag ctactaaaat caaacaaggt
    14521 actcttggtt tcaacttcat gcttcttttg gagcgtcgtt tggacaacgt cgtttaccgt
    14581 cttggtttgg caactactcg tcgtcaagca cgtcaattcg taaaccacgg tcacatcctt
    14641 gttgacggca aacgcgttga tattccttca taccgcgttg aagttggtca agttatctca
    14701 gttcgtgaga agtcaatcaa agttccagct atccttgaag ctgttgaagc aactcttgga
    14761 cgtccagctt tcgtatcatt cgatgctgaa aagcttgaag gttcattgac tcgcttgcca
    14821 gaacgcgacg aaatcaaccc agaaatcaac gaagctcttg tcgtagaatt ctacaacaaa
    14881 atgctctaag atttgtatcg atattttaaa agccctattt acaagggctt tttgtctgta
    14941 tttgaggagg gattatgtgg cgtaagtatt ctttgctagt ggtattgact attttggtcg
    15001 taggtggggc attctttcta tctcaatcag cggctgcacc aaatgaatca gactacgtga
    15061 aagctgtaaa gagttatcag gctatttcga tagatgaagt ggagcaaaaa atccaaaacg
    15121 aggaagaatt tatattatac ataggtcggg agacatgtcc atattgtcgt gattttgttc
    15181 ctaaattaac agaggcagta gagcgatcac gtgcgactat ctactatttg gatagcgagt
    15241 cggatccgaa tggaaaaata caacaatttc gacagagtca aggtcttgct acggttccta
    15301 gcttaaccta ttataaatcg ggtaaattat ctggaatact tcgtaaaggg agtcaagcaa
    15361 cgctatccga aatagagaat tttttagctc ttcaagggca gtaaatagtt ttaagaatgt
    15421 atgaagcgaa tatcatacat ttttttgttc atgtttgtga aaaatatttc aaaacagatt
    15481 gaaaaacatt tcacaatctt gtataatact aatatcagat aaaaattgga ggtttatatg
    15541 aaaaagaaag cttggttagg cttgttgatg agtctacttg ctgttttgtt tttagtggcg
    15601 tgtggaggta agtctgaaaa gacagctaca tcttcatcat ctacgacttc ttcatcagaa
    15661 gaagctgttt caggtgcatc tgagaaagtt tatacagatc catctgagtt gaaagatagc
    15721 tacgatgtta tcgttgttgg ttcaggtggt gcaggtatgt cagcagctat ctcagctaaa
    15781 gatgctggtg ctagtgtcgc tctcttggag aaaatgcctg ttatcggtgg taatacggct
    15841 aaatcatcag ctggtatgaa tgcttcacag actaaattcc aagaagcgga aggtattgct
    15901 gattcaaacg ataaattcta cgaagaaacg cttaaaggtg gtaaagggac aaacgatcct
    15961 gaattgcttc gttatcttgt agataactct gctagtgcaa ttgactggtt ggatggtatg
    16021 ggtattaccc tcagcaacct aactacaact ggtggtatga gcgagaaacg tacccaccgt
    16081 cctgcagatg gttcagctgt cggtggctac ttggtaaatg gtctttacca caatcttgtt
    16141 gaacgtgaag taccaatttt tgtcaatgca gatgttacaa aactccaaga caaggatgga
    16201 gctgtgacag gtgttgaagt gaagattgct ggtgaaacta agaaaatctc agctaaagca
    16261 gttgtattag cgactggtgg tttcggtgct gatttggaaa tggttgctaa attaaaccca
    16321 gcattgaaag gttatgttac aactaaccaa gaaggttcaa caggtgacgg tattgcgctt
    16381 gctgaatcag aaggtgcagc aaccgttgat atggaacaaa tccaaattca cccaagtgtt
    16441 gagcaagaaa cttcttactt gattacagaa gcagttcgtg gcgaaggtgc tatccttgtc
    16501 aactcaaaag gtgagcgttt tgttaacgaa ttggaaactc gtgataaagt ttctgcggct
    16561 atcaatagtt tggatccaaa ctacgcttat gttatctttg atgatgcctt gaaagatcgt
    16621 gtgaaagcta ttgctcagta tgaagaaaaa ggtcttgtaa aaacgggtgc tactcttgca
    16681 gatttggcta aagaaattgg tgtacctgcg gatgctcttc aaacaacact tgatacttgg
    16741 aacaaggctg tggcagacaa aaatgatgcg gcatttggtc gtacatcagg tatggaccat
    16801 gctttgaata ctggttctta ccatgccatt aaagttgcac ctggtattca ccatacaatg
    16861 ggtggtgtga aaatcaatac caatactgaa gtattgaaaa cagatggttc agcaatttct
    16921 ggtctttatg ctgctggtga agtaactggt ggtgttcatg gtcaaaaccg aattggtggt
    16981 aatgctgtag cagatatcat cgtatttggt cgtcaggctg gtgaacaagc agctggattt
    17041 gctaagaaat aaattgtaga cataagaggc tcggcagaaa gaaggtcgag cttctttttc
    17101 ttgtccctct atctctaaga tgatatactt ttaaggtatg aagaagaaaa tagtattatt
    17161 gttaggagct attgcagtta tagttttgac ttggtctgct attgctggtc agcgtcagca
    17221 atcctatgcc gaggctgaat taagagacca ggataaaatc tggattatca ctgatttgca
    17281 ttatttgtca caagatttat ttgatgatgg agaggcattt tcttatatag aaaagacagc
    17341 tgctggcaag gatttacgtt atggaaaaga gcggatggag gctttggttg agcaggttga
    17401 gcgtgaacat ccttccttgt tactagtcag tggggatttg actctaaacg gtgaaaagca
    17461 gagcatggtt gagttggagc aatattttac ccggattgaa gaaaaaggaa cggaggtttt
    17521 ggtgattcct ggcaaccatg atattgccag tggatgggct agggccttta agggagatca
    17581 gcagatagtg acggatcagg tcaccgctca gcaatttgca gagctatttg cccatcacgg
    17641 ttatcaacaa gctagcagtc gtgacaaagc ctcattgagc tacctggcca aaccattttc
    17701 caatgcttgg tttctgatga tagacagcaa catctactct gacagctaca gcaaaggagc
    17761 tcctccaacc aatggacgta tcaaaaaaga gactctagaa tggatagaaa ttcagcttag
    17821 gtcagctaag gaagctggag tgagcctgat acctgttgtc catcacaatg tcttgcaaca
    17881 gcatgccatg ctctcaaaag gctatacttt ggataatgct gccgatttga aggctttgtt
    17941 caatcaatat ggcattcaat ttggtttttc aggccatact cattctcaga atattgttaa
    18001 ggaagacttg ggacaagtta actatactga agtggtcaat ggagcatttt ctatttatcc
    18061 agctattatc ggtcaattga gccttgatga tacaagcatt cactatcaaa aaactcaact
    18121 tgatatggct tcgtgggcag aaaagcacca acctagtgat ccaaatttgc aagatcacgt
    18181 tacctactta caaactgtct ttgacaatac cagtgacatc atggtccaca atgtgttaaa
    18241 cgatgagcgt tggtatgacg gtgagacggc agatgctatt tcacaattta tcatgccggc
    18301 caaccgtgct tatttttcag gagaaaaact agatcagact tggctaaatg agaaggtatt
    18361 ttcaagccag gcttatcaga ccttgcaagc agcatcaccg agaagtttct tggctgatta
    18421 tcttgatgtg attataaaac ggagtcaaag tcgagatgtg gagcaagtaa cggtttctaa
    18481 atgatgaata gaaaaaaggc tgggcaagcc cagtctcgtt tctcagagtt cgtgtcaaca
    18541 tctcagcgca gtggttgatt ggcagatttg ttcgtgtttc acactccaaa tctgacctaa
    18601 tcaactgtgc gggggtggga agacgaactc ttttttctac cattcgtcaa gcctttcaag
    18661 gtatttgatg aacaatattt tgaattcagt agtcaaaata aggaaattat tttattttgg
    18721 actaaagttt agtgtaaaaa gtgtatacaa aagcaacacc ttatgttgaa attttttgat
    18781 aaggtgttac aatgatagag cataaacagt tttaccgatt ttgggtagaa gtataatcgt
    18841 aaagcttatt atgcgtaatg aggtaataca ttgtccgaat gagacgatgt atggaggcaa
    18901 tcgtgtg
//
LOCUS       DBNFCX010000037        18756 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.037, whole genome shotgun sequence.
ACCESSION   DBNFCX010000037 DBNFCX010000000
VERSION     DBNFCX010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 18756)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18756)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18756
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.037"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..679
                     /gene="radC"
                     /locus_tag="AC1PJC_001160"
     CDS             <1..679
                     /gene="radC"
                     /locus_tag="AC1PJC_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RadC family protein"
                     /protein_id="HIP6620152.1"
                     /translation="YQIEFKEEAILPRERLVEVGAERLSNQELLAIFIRTGTKKEPVS
                     ILSNKLLNRLESLAALRELSIEELQSLTGIGRVKAIEIKAMIELGKRINQSELLLNER
                     ILGSEKLGRKMIHEIGHKKQEHLVALYLNTQNQIISQKTIFIGSVNRSIAEPREILHY
                     AVKCMATSIIIVHNHPSGSVQPSRNDLLFTENLKESCEKLGLVLLDHLIVGNKDYYSF
                     REESELF"
     gene            complement(676..1368)
                     /locus_tag="AC1PJC_001161"
     CDS             complement(676..1368)
                     /locus_tag="AC1PJC_001161"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HIP6620153.1"
                     /translation="MKKPVIGISGNEYKTGDHTEPLLSYTQTCLVQAIEDAGGLPLIL
                     PVTEPDVAKYYIHLIDKLILTGGQNVQPSYYHEERTIDSDNYLPKRDEFELALIRAAQ
                     ENQKPIFGICRGLQLYNVAQGGSLHQSISEHWQDIDGQEVSQTIQLTQNSPLYDIYKS
                     DLTVNSFHRQAIKDLASDLEIIALSDNQQIIEAVHSAYPTKFLGVQWHPELLYGKREI
                     EKDLFHYIVNKL"
     gene            complement(1372..2010)
                     /locus_tag="AC1PJC_001162"
     CDS             complement(1372..2010)
                     /locus_tag="AC1PJC_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensing transcriptional repressor Rex"
                     /protein_id="HIP6620154.1"
                     /translation="MKNDKKSDIPRATAKRLSLYYRIFKRFYAGNIEKASSKEIAEAI
                     GIDSATVRRDFSYFGELGRRGFGYNVKELMDFFADILNDTSITNVMLVGVGNMGRALL
                     HYRFHERNKMKIVMAFEADDNPAVGTTDENIPIHAISEIKERISEANSQTAILTVPSV
                     KAQEVTDILVEAGVKGILSFSPVNLSVPKDVVVQYVDLTSELQTLLYFMRKG"
     gene            complement(2145..2348)
                     /locus_tag="AC1PJC_001163"
     CDS             complement(2145..2348)
                     /locus_tag="AC1PJC_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4649 family protein"
                     /protein_id="HIP6620155.1"
                     /translation="MIEIHYLDAYKQERIQTFENKDAAILAFSGCLTLPDYYPVTSIT
                     QDGQALDYKGTIGDLYRYLQTLD"
     gene            complement(2350..2694)
                     /locus_tag="AC1PJC_001164"
     CDS             complement(2350..2694)
                     /locus_tag="AC1PJC_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1831 domain-containing protein"
                     /protein_id="HIP6620156.1"
                     /translation="MAFQQSVTLKDCNFTYHISPAIKKYTLRDNTFEQTKAGHYQLTR
                     LLEEIPNSNQGFLLKIIINQDLTGFKINITDKSGLHLVNIFKPESNKVIQEKFYFLMD
                     SLIDRNIFTKEG"
     gene            complement(2696..3811)
                     /locus_tag="AC1PJC_001165"
     CDS             complement(2696..3811)
                     /locus_tag="AC1PJC_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase family protein"
                     /protein_id="HIP6620157.1"
                     /translation="MIYLDNAATTALSPTALQRMMEVAQENYGNPSSIHQSGRKANQC
                     LRQSRQEIAQILSASPEQIIFTSGGSEADTLAIQGYALAHQSKGKHLITTAIEHHAVL
                     HTMQYLEDRFGFEVTYIQPVNQVITAQQIQDALRPDTILVSVMFANNETGQLLPIKEI
                     GELLADHQAVFHVDAVQTIGKIAISPSDYGIDLLAASAHKFHGPKGMGFLYSKVHKFD
                     SLIHGGKQEQQHRAGTENLPAIAAMATALTEQYESLDTHHQHVSELRQHIIEGLSGLD
                     YYLNQAGPHLPHVLNIGFPGKLNEQLLMQLDLAGIAVSSGSACTAGVVQNSHVLEAMY
                     GKDSHRLKESIRISLSEINTKEEIDTLIIELKKILGG"
     gene            complement(3822..4799)
                     /locus_tag="AC1PJC_001166"
     CDS             complement(3822..4799)
                     /locus_tag="AC1PJC_001166"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HIP6620158.1"
                     /translation="MVQPLGEHNIKLFSLNSNRDIAEKIADSAGIPLGKLSSRQFSDG
                     EIQINIEESVRGVDVYIIQSTSYPVNNHLWELLIMIDACKRASANTITAVIPYFGYAR
                     QDRTASPREPITAKLVANMLVKAGVDRVLTLDLHASQIQGFFDIPVDNLLTEPLFAAY
                     YMEKGLCGEDVVIVSPKNSGIKRARNIAEFLNAPIAIIDYAQDDSERSEGYIIGDVAG
                     KKAILVDDILNTGRTFSQASKIVQDGGATEIYAVASHGLFAGTAAQLLDEAPIKEILV
                     TDSVASKEQHPKNIAFLTASDLIADAIHRIQEHQPLSPLFKFTSPEKEN"
     gene            complement(4944..5510)
                     /locus_tag="AC1PJC_001167"
     CDS             complement(4944..5510)
                     /locus_tag="AC1PJC_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HIP6620159.1"
                     /translation="MKNHLEIEYKTLLTKSEYKRLLTDFSDVSPILQTNHYIDTPDLD
                     MKNHRFSLRIRTFEDSAELTLKIPQEVGNQEYNQVLDIQTAHDLLENFQLPAGQISDI
                     ISATEIPLDKLAVWGSLTTKRYEKQTSIGLMALDENDYVGQKDYELEVEVTDADAGKI
                     LFDEFLKKKSIQFKYASSKVARTAAHMK"
     gene            5597..6268
                     /locus_tag="AC1PJC_001168"
     CDS             5597..6268
                     /locus_tag="AC1PJC_001168"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008728 - GTP diphosphokinase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015969 - guanosine tetraphosphate
                     metabolic process [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase"
                     /protein_id="HIP6620160.1"
                     /translation="MDFNWEEFLDPYIQTVGELKIKLRGIRKQYRKANRHSPIEFVTG
                     RVKPIESIKEKMALRHIKLENLAQDMQDIAGLRIMVQFVDDIEEVLAILRKRKDMQIV
                     HERDYINNMKASGYRSYHVVIEYPVDTINGNETVLAEIQIRTLSMNFWATIEHSLNYK
                     YKGNFPEEIKKRLEVTAKIAYELDEEMRKIRNDIQEAQALFDPAYRKLNDGVGNSDDT
                     DEEYR"
     gene            6252..7070
                     /locus_tag="AC1PJC_001169"
     CDS             6252..7070
                     /locus_tag="AC1PJC_001169"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD kinase"
                     /protein_id="HIP6620161.1"
                     /translation="MKNTGRKKIALLASRNPKSEAVSKELWTKLKEANFILTPKNPDI
                     VISIGGDGMLLSAFHKYEKLIDRVRFVGIHTGHLGFYTDYRDFEVDKLIENLKLDTGA
                     RVSYPILNVKVKMTDGRIVEARALNEATVKRLSKTMVADIIINNVPFERFRGDGISVS
                     TPTGSTAYNKSLGGAVLHPTIEALQIAEVASLNNRVYRTLGSSVVVPKKDKIVIEPKH
                     SDRYSIAVDNKTFVYDSIESIEYQIDNSKIHFVATPSHTSFWNRVKDAFIGEVE"
     gene            7070..7963
                     /locus_tag="AC1PJC_001170"
     CDS             7070..7963
                     /locus_tag="AC1PJC_001170"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HIP6620162.1"
                     /translation="MRFEFIADQHTKIKTFLKKHGVSKGLLAKIKYTGGNIWVNDIEQ
                     NATYLLDIGDRVTIDIPAEEDLTGSLKPIFFPLDIVYEDDHFLAINKPVGYASIPSAL
                     HSSTIANFVKGYLIEQNYENKQVHIVTRLDRDTSGVMLFAKHGYAHARLDKQLQAKLI
                     HKRYYALVKGNGQLEETGDIIAPIGRPADSIITRCVTKNGKYAHTSYRVVQSWGDIHL
                     VDIQLHTGRTHQIRVHFSHIGFPLLGDDMYGGSLECGIERQALHCHNLAFDNPFSAER
                     IDLEAPLPEDFQAVINQLISK"
     gene            7981..8955
                     /gene="pta"
                     /locus_tag="AC1PJC_001171"
     CDS             7981..8955
                     /gene="pta"
                     /locus_tag="AC1PJC_001171"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016407 - acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HIP6620163.1"
                     /translation="MKIFEQLATKLEGKKVRIVLPEGEEPRILQATKRLVNESDVVPV
                     LLGNPDRIKIYLDIEGITEGFEIIDPAHYDRYDEMVAALVERRKGKVSEEQAHELLKD
                     VNYFGVMLVYMGVVEGMVSGAIHSTASTVRPALQIIKTEPGVSKTSGAFLMVKGEERY
                     IFGDCAINIDPDAQTLAEIAINSARTAKMFGIDPKVAMLSYSTKGSGSGPKVDKVVEA
                     TKIAQKLRPELDLDGELQFDAAFVPTTGKLKAPGSSVAGQATVFIFPGISAGNIGYKI
                     AERMGGFAAVGPVLQGLNQPVNDLSRGCNPDDVYNLTLITAVQALEHR"
     gene            8957..10696
                     /locus_tag="AC1PJC_001172"
     CDS             8957..10696
                     /locus_tag="AC1PJC_001172"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6620164.1"
                     /translation="MKFLSRYFKDYIKESILGPVFKLLEACFELLVPLIIAYIVDTII
                     PNGSQGNLVAMLFLLVGIACIGIIVSLIAQYYSAKAAVGVTKELTNDLYQKVLSLPKS
                     SRDILSSSSLLTRLTSDTLQIQTGINTFLRLFLRAPIVVFGSLIMAFYISPSLSAYFL
                     GMIILLIFIVTVISVMTSRIYQSMRKELDGLVGQVRETVTGWRVIRAFGQREREIKAF
                     QGINQIYKKQQLQAGFWSSLLSPLTFLVVNGTLLILIWRGNIAISHNLLEQGMLVALI
                     NYLLQILVELVKMIMVVSTLNQTYISAQRIQEIFDQTSEDVESSLPKVVSVDKEIIFS
                     VRHLSFSYPKSAEESLSDITFDLRKGQFMGIIGGTGSGKSTLVDLLQALYSVQTNQLS
                     LFIDGKSPKNLKEWRQQIAIVPQQAQLFTGTIRSNLSLGLEEISDSDLWSALEIAQAK
                     SFIEDKGGLDSPVEAFGKNFSGGQRQRLTIARAILQKAPILILDDATSALDYLTESRL
                     LVAIRQELPGQNLIMVSQRTNSLRTADQILVLEQGRQVGLGRHEDLLRSSAIYQEIHQ
                     SQQQGEEDSYETI"
     gene            10683..12425
                     /locus_tag="AC1PJC_001173"
                     /pseudo
     CDS             10683..12425
                     /locus_tag="AC1PJC_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028203.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
     gene            12409..12801
                     /locus_tag="AC1PJC_001174"
     CDS             12409..12801
                     /locus_tag="AC1PJC_001174"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0047617 - fatty acyl-CoA hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HIP6620165.1"
                     /translation="MNVLDKLDLQPITVLDDYQATMLNEKEVLLTTKVTEKSLNPYGM
                     AHGGFLFTLADSVAGLTTVARGSYSVTLQSNIHYMKAAKLGDTLSVIGSCTHDGSRTK
                     VVEVKIENQDKQLLASASFTMFVTGKVE"
     gene            13035..14195
                     /gene="mutY"
                     /locus_tag="AC1PJC_001175"
     CDS             13035..14195
                     /gene="mutY"
                     /locus_tag="AC1PJC_001175"
                     /EC_number="3.2.2.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HIP6620166.1"
                     /translation="MLNLKEYGIEMWPEEKIQAFRKALLDWYDANKRDLPWRRTKDPY
                     AIWVSEIMLQQTRVDTVIPYYERFLHHLPTISDLAQAPEEVILKLWEGLGYYSRVRNM
                     QKAAQQMVEDFDGQFPTTHTAISSLKGIGPYTAGAISSIAFNLPEPAVDGNVMRVLSR
                     LFEVDYDIGLPANRKIFQAMMELLIDPERPGDFNQALMDLGSDIESPVNPRPQDSPVK
                     AFSAAYLNGTMDKYPIKAPKKKPIPVAYQGFLIRNKDNQFLLEKNNEAGLLSGFWSFP
                     LLEKGAIVEKQVSLFEVAEEVVQPDIRQSFTELYGLTVDWQEQEFGIVQHIFSHRKWQ
                     IEMVEGVAETLNLPESKELKWVSVEDFPTYPFAKPQQKMWENFIKEKEKQKS"
     gene            complement(14858..15658)
                     /locus_tag="AC1PJC_001176"
     CDS             complement(14858..15658)
                     /locus_tag="AC1PJC_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIP6620167.1"
                     /translation="MILGDILKEYRSKNKLSMDKFAELSGLTKGYISMLEKNQHPKTK
                     KALLPTMDTLEKVAKGMAISVGELIEQLDSNQDIALTITPSQFKLFQQPIHPEVQTLD
                     NELKGDFHAQWLTFGQEQLAAMQTTSVTPSASILHLNDYRERIDLPVPGKVSAGTGYW
                     QDTDMNNLVSFYNDEIPDNQSYDTIAQVVGDSMAPHIEDGDYLFIRLTPHIPLNTIGI
                     FSVNGENFVKKFKGDYLQSLNSDYDDIYFSPEDDIRPIGQVVYIYSSD"
     gene            15789..16259
                     /locus_tag="AC1PJC_001177"
     CDS             15789..16259
                     /locus_tag="AC1PJC_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620168.1"
                     /translation="MKRMTEISWNDIYKEWETYANHFGLTTPINTEKLRDQKSKDFGK
                     GSLITLDLLADYDTDSEKTAAIWVASFCRDLIQDYAYLLNGRAYLTVNQIYFQALKQF
                     QSEAVIWSKPLTRLQPKLFVSYRLLENLDLSHYSCVVELAMLQASMVRTQILEK"
     gene            16279..16821
                     /locus_tag="AC1PJC_001178"
     CDS             16279..16821
                     /locus_tag="AC1PJC_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620169.1"
                     /translation="MFDLLNKKAEVSKVAEYWNDTLIERGILSADELLEGKCWRCKSS
                     HGVAVCQIVSSKWSKDTSLANQMVLCLSCQHEKPNVADTEIVWQWLEVENNERYWTLQ
                     GMAEYEKMYKKSVLQELWDMGIRDGEEVETLVNKVTSLSRKNGIVLNRATLAGLFRCE
                     IEQMRRKAFLNWTGIFKLVS"
     gene            complement(16995..17135)
                     /locus_tag="AC1PJC_001179"
     CDS             complement(16995..17135)
                     /locus_tag="AC1PJC_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014635984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620170.1"
                     /translation="MIGHAINGIEGAMFAMLYEADRTYYHCQHCGYRFSRKENRFISN
                     IE"
     gene            17495..>18756
                     /locus_tag="AC1PJC_001180"
     CDS             17495..>18756
                     /locus_tag="AC1PJC_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015604466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase/cysteine synthase family
                     protein"
                     /protein_id="HIP6620171.1"
                     /translation="MTREFSFETLQLHAGQEVDSASKSRAVPIYQTTSYVFEDAQEAE
                     DLFALRKSGNIYTRITNPTVSTFENRVAALEGGIGALATSSGMAAITYTILALAHAGD
                     HIVAATTLYGGTFNLFKETLPRYGITTSFVDIDDFEAVEAAIQDNTKLVFIETLGNPV
                     INIPDFEKLAEIAHNHHIPLVSDNTFATPYLINVFSHGVDIAVHSATKFIGGHGTTIG
                     GVIVDSGKFDWAASGKFPQFVEEDPSYHNISYTRDIGAAAFIVAVRVQLLRDTGAALS
                     PFNAFLLLQGLETLSLRVERHVSNAEKIVDFLLSHPQVESVNYPSLPDSPYKALADKY
                     LPKGVGSIFSFQVKGGAEEARKVIDSLEIFSNLANVADAKSLVVHPATTTHAQLAPED
                     LLAAGVTPNQIRLSVGLENINDLIEDLQL"
BASE COUNT         5540 a         3325 c         4081 g         5810 t
ORIGIN      
        1 gtatcaaatt gaatttaaag aagaggccat tctacctaga gaacgtttag tagaagttgg
       61 agctgagcgt ctcagtaatc aggaattact agcaattttt attagaactg ggacaaaaaa
      121 agaacctgtt tctattctct ccaataaatt attgaatcgt ttggagagtt tagcggctct
      181 aagagaatta tcaattgaag aattgcaaag tttgactgga attgggcgcg tcaaggcgat
      241 tgaaattaag gctatgattg aacttggaaa acgtatcaat caatcagagc tactcttaaa
      301 tgagagaatt ttgggaagtg agaagttggg acgtaagatg attcatgaaa tcgggcataa
      361 gaagcaggag catcttgttg cactttatct caatacacag aaccagatta tcagtcaaaa
      421 aacgattttt attgggagtg ttaatcgtag cattgcagaa ccacgtgaaa ttttgcatta
      481 cgcagtaaaa tgcatggcaa catcgattat catcgttcac aaccacccgt cgggttcagt
      541 acaacctagt aggaatgatt tgctatttac ggagaattta aaagagtcct gcgaaaagct
      601 aggactggta ttattagatc atttaattgt tggaaataag gattactatt cttttagaga
      661 agaaagtgag ttattttaaa gtttattgac aatatagtgg aagaggtctt tttcaatctc
      721 acgtttaccg tagagtagtt caggatgcca ttgaacccct aaaaatttag ttgggtaggc
      781 tgaatgaaca gcttcaataa tctgttgatt atccgatagt gcaatgattt ctaagtcaga
      841 tgctaagtct ttgatagcct gacggtgaaa tgagtttaca gtcagatcgg acttatatat
      901 gtcgtaaagt ggactatttt gagtcagttg aatcgtttga ctgacttctt gtccgtctat
      961 gtcttgccaa tgttcagaaa ttgattgatg aaggctacca ccttgagcta cattgtagag
     1021 ctgtagacct cggcagatac cgaagatagg tttctgattt tcttgggcag cccttatgag
     1081 ggctaattca aactcgtcac gctttggtag ataattatcg ctgtcaatag tcctttcttc
     1141 gtgatagtaa cttggctgga cattttgtcc tcctgttagg atgagtttgt caataagatg
     1201 gatataatat tttgccacat caggctctgt aacaggaagg atgagtggga gtccgccagc
     1261 atcttcaata gcttgtacga ggcaagtctg ggtataagaa agcaggggtt ctgtatgatc
     1321 ccctgtttta tattcatttc cagaaatacc aataactggt tttttcattg cttatccttt
     1381 tcgcataaag tagagtagtg tttgtaattc actagtcaaa tcaacatact gaacaacgac
     1441 atcttttggg acagacaagt taactggcga aaagctcaga atccccttaa caccagcttc
     1501 aacaagaata tcggtcactt cttgcgcctt gacgctgggt accgttagaa tggctgtctg
     1561 agagtttgct tcgctgatac gttccttgat ttctgagatt gcatggattg ggatattttc
     1621 atctgtcgtt ccaacagctg gattatcatc tgcttcaaaa gccatgacta ttttcatttt
     1681 atttcgttcg tggaagcgat agtgtagcaa ggcccgcccc atattcccga ctccaacaag
     1741 cataacattg gtgatggagg tatcatttag aatatccgca aagaaatcca tcaactcttt
     1801 gacattgtag ccaaagccac gacgaccaag ctctccaaaa taggaaaaat ctcggcggac
     1861 ggtagccgaa tcgattccga tagcttcagc aatttctttt gaactagctt tttcaatatt
     1921 tcctgcatag aaacgtttaa aaatgcgata gtagagggat agacgtttgg cagttgcgcg
     1981 tggaatatca gattttttat cgtttttcac tttagactcc tttatttcga tagaatacgc
     2041 tttatcgatt atttatatat taaacagttc tttattctat tctagtccaa gtttgtgaaa
     2101 aaatcaacag attgatttta aaaaaagatt aaacaggaaa ctgtctaatc tagtgtttgt
     2161 aaatagcgat agagatcccc gattgtccct ttgtaatcca gagcttgtcc gtcttgtgta
     2221 atgctggtaa ctggataata gtctgggagg gttaagcaac cggaaaaagc cagaatggct
     2281 gcatctttat tctcaaatgt ttggatacgt tcttgcttgt aagcgtcaag atagtgaatt
     2341 tcaatcatac taaccctctt ttgtaaagat gttacggtca atcaagctat ccatgaggaa
     2401 atagaatttt tcttgaataa ccttgttact ttctggttta aaaatgttta ccagatgaag
     2461 accagacttg tcggtaatgt taattttaaa accagttagg tcttgattga taataatttt
     2521 caagaggaat ccttggtttg aatttggaat ttcttccaga agacgtgtaa gctgatagtg
     2581 acctgctttg gtttgttcaa aggtgttatc acggagtgta tattttttga tagcagggct
     2641 aatgtgataa gtaaaattac aatcttttaa ggtaactgat tgttggaatg ccattttaac
     2701 ctccaagtat tttctttagt tcgatgataa gagtatctat ctcttctttt gtattgattt
     2761 cagataggct gatacgaatg gattctttca gacgatggga gtcttttcca tacatagctt
     2821 ctaaaacatg gctattttgg acaacacctg ccgtacatgc agaaccacta gaaacagcga
     2881 tacctgccaa atctagttgc ataaggagtt gttcattaag tttaccagga aaaccaatat
     2941 taaggacatg agggagatga ggtccagcct gattgagata atagtctaag ccagacaatc
     3001 cctcgataat atgttgtcgc agttcactga catgttgatg atgcgtatct aaggactcat
     3061 attgttctgt tagggcagtc gccatagcag caatagcagg gagattctca gtacctgctc
     3121 gatgttgctg ttcctgcttt ccgccgtgga tcaaggaatc aaatttatga actttactat
     3181 acaggaatcc catccctttt ggaccatgga atttatgggc agaggccgcg agcaagtcaa
     3241 ttccgtagtc agagggagaa attgcaattt ttccaattgt ttggacagca tctacatgaa
     3301 agacggcctg atgatcggct aggagctctc caatttcctt gatgggaagt agctgaccgg
     3361 tctcattgtt agcaaacatg acgctgacta aaatagtatc tggccgaagg gcatcctgaa
     3421 tttgttgagc ggtgattact tgattgactg gttggatata ggttacctcg aatccaaacc
     3481 gatcctctag atactgcatg gtatggagga cagcatggtg ttcgatagcc gtagtaatca
     3541 ggtgttttcc tttggattga tgcgcaagtg catagccttg aatagctaaa gtatcagctt
     3601 cggagcctcc agatgtgaaa ataatttgtt caggagaggc ggagagaatc tgagcaatct
     3661 cttgacgact ttgtctaaga cattgattgg ctttccgacc gctttgatga atactggagg
     3721 ggtttccata attttcttga gccacttcca tcatccgttg gagtgcagta ggagatagag
     3781 cagtggttgc tgcattatct aaataaatca aagagttact cctagttttc tttttcagga
     3841 ctagtaaatt tgaaaagtgg gctgagtggc tgatgttctt ggatgcggtg gatggcatct
     3901 gcaatcaagt cactagctgt taggaaggcg atatttttag gatgctgttc tttgcttgca
     3961 acagaatcgg taactaatat ttctttgatt ggtgcttcat ctaagagttg ggctgcagtt
     4021 cctgcaaaga gaccatggct ggcaactgca taaatttcag tagcaccacc gtcttggaca
     4081 atttttgaag cttgtgagaa agtgcgacca gtattgagaa tatcgtctac caaaatagct
     4141 tttttaccag caacatcacc gataatatag ccttcagaac gctcagaatc atcttgagcg
     4201 tagtcgataa ttgcaattgg tgcatttaga aattcagcga tattacgcgc gcgtttgata
     4261 ccagaatttt taggactcac aatgacgaca tcttctccgc agagtccttt ttccatgtag
     4321 taggctgcaa aaagtggttc tgtaaggaga ttgtctactg gaatatcaaa gaaaccttga
     4381 atttgtgaag cgtgcaaatc aagagtcaat acacggtcga caccagcttt aaccagcata
     4441 tttgcaacta atttagctgt aattggttcg cgtggagaag cggtacggtc ttgacgagca
     4501 tagccgaaat aagggatgac cgctgtaatg gtgttggcac tagcacgttt acaagcatcg
     4561 atcataatca ataattccca caagtgatta ttgaccggat agcttgttga ttggataatg
     4621 tagacgtcta cgccacgtac agattcttca atgttaattt gaatctcacc atcagaaaac
     4681 tgacgagaag acagctttcc aagaggaatt ccagcagaat cagcaatttt ttcagcaata
     4741 tcacggttgc tattgagtga gaataattta atgttatgtt caccgagtgg ttgtaccatt
     4801 ttaaagtaac tccttttaca cactgagctt ttatgatgac ataaaagtat tttttacaat
     4861 agatagttct attctatcaa aaaaatgaaa aattttcagt agtgaaacta aaaaatcaac
     4921 cttatttggc tgatttttta tagttatttc atgtgggcag ctgttcgtgc gaccttacta
     4981 ctagcatatt tgaattgaat tgatttcttc ttaaggaatt catcaaaaag aattttccct
     5041 gcatctgcat cggtcacttc gacttctaat tcgtaatctt tttgtcccac ataatcattt
     5101 tcatcgagtg ccataaggcc tatagatgtc tgtttctcat agcgttttgt cgtgaggctt
     5161 ccccagacag caagtttatc aagtggaatt tcggttgcag aaataatatc agaaatttgt
     5221 ccggctggta gttgaaaatt ttccagtaaa tcatgagcag tttggatgtc tagaacctgg
     5281 ttatattctt gattgccgac ttcttgtgga atttttaagg ttagttctgc tgagtcctca
     5341 aatgtacgaa tacggagtga aaagcggtga ttcttcatat ctaggtctgg ggtatcaatg
     5401 tagtggtttg tttgaagaat tggactcaca tctgaaaagt cagtaagcag gcgtttgtat
     5461 tcggatttgg tcagtaaggt tttatactca atttcaaggt ggtttttcat gcagtaaacc
     5521 ctttcaatgt gttataatag attagtcttt gtgttattct aatacaattt aaaagttttg
     5581 acaagaaagg ggccgtatgg actttaactg ggaagaattt ttagacccct atattcagac
     5641 agttggtgaa ttgaaaatca aactgcgggg gattcgcaag cagtatcgca aggctaatcg
     5701 gcattctcca attgagtttg tcacaggacg ggtaaaaccg attgaatcca ttaaagaaaa
     5761 aatggccctg cgacatatca aattggaaaa tcttgctcaa gatatgcaag atattgccgg
     5821 tcttcggatt atggtccaat ttgtggacga cattgaagaa gtattagcta ttttgcggaa
     5881 acgcaaggat atgcaaattg tgcatgaacg ggattatatc aacaatatga aagcctctgg
     5941 ctaccgttca tatcatgtgg tgattgagta tcctgtggat actataaatg gcaacgagac
     6001 ggttctggca gaaatccaga ttcgaaccct ttccatgaat ttctgggcta caattgaaca
     6061 ttctctgaat tataaatata aggggaattt tccagaagaa atcaagaaac gcttggaagt
     6121 tacagcaaaa attgcctatg aattagatga ggagatgcga aaaatccgca acgacattca
     6181 agaagcgcag gccttatttg atcctgccta tcgcaaactg aatgacggtg tgggcaacag
     6241 tgatgataca gatgaagaat acaggtagaa aaaaaatcgc tctgctcgct agtcgaaatc
     6301 ctaagagtga agcggtgtcc aaagaattat ggacaaagtt aaaagaagca aattttattt
     6361 tgactcctaa aaatccagat attgtcattt ctatcggtgg agatgggatg cttttatctg
     6421 cttttcacaa atatgaaaag ttgattgatc gtgtacgttt tgtaggaatt cacacgggtc
     6481 atttggggtt ttatacagat tatcgcgatt ttgaagtgga caagctgatt gaaaatctta
     6541 agcttgatac aggtgctaga gtatcgtatc cgattttaaa tgttaaggtc aagatgacag
     6601 atggtcgcat tgtcgaggcg cgtgccttaa atgaggcgac agtaaaacgt ctttctaaga
     6661 ccatggtcgc agatattatt attaacaatg tgcccttcga acgctttaga ggggatggaa
     6721 tttcggtttc aacgccgaca ggctcaacag cctataacaa gtcattaggt ggtgctgttt
     6781 tacatccaac aatcgaggca ttgcagattg cagaagtggc aagtttgaac aatcgtgttt
     6841 accgcacctt gggttcatcc gttgttgtcc ctaaaaaaga caagattgtg attgaaccaa
     6901 agcatagtga ccgttactcg attgcggtag acaataagac ttttgtctat gatagtattg
     6961 aaagtataga gtatcagata gacaatagta agattcattt tgttgcaaca ccgagtcata
     7021 ctagtttttg gaatcgggtt aaggacgcct ttattggaga ggtggagtaa tgcggtttga
     7081 attcattgct gaccagcata cgaaaataaa gactttcctt aaaaaacacg gtgtctctaa
     7141 aggcctatta gcgaagatta agtataccgg tggcaatatc tgggtcaacg atattgagca
     7201 aaatgcaact tacttgcttg atattggaga tagggttaca attgacatac ctgctgaaga
     7261 ggatttgact ggtagtttaa aaccgatttt ctttccgttg gatattgtct atgaagatga
     7321 tcattttctg gcgataaata agccggttgg ctacgcctcc attccttctg ccttgcattc
     7381 atccacaatc gcaaattttg taaaaggtta tcttattgag cagaattatg agaataagca
     7441 ggttcatatt gtgactcgtc tggataggga tacatcaggc gtcatgctgt ttgccaagca
     7501 cggctatgcc catgcacgac tcgataagca gttacaagcc aagcttattc ataaacgtta
     7561 ttatgctttg gtgaagggga atgggcagct agaagagaca ggggatatta ttgcccctat
     7621 cggtcgtcca gcagatagca tcattacccg ttgtgtgaca aagaatggaa aatatgctca
     7681 tacttcctat cgtgttgtac aatcgtgggg agatattcat ttagtagata ttcaactaca
     7741 tactgggcgg actcatcaga ttcgtgttca tttttctcac attggatttc cattgttagg
     7801 agatgatatg tatggtggaa gtttggaatg tgggatagaa cgtcaagcct tacattgtca
     7861 taatttagcc ttcgacaatc ctttttcagc cgaaaggatt gatttggaag caccgcttcc
     7921 tgaggatttt caggctgtca tcaatcagtt aataagtaaa taaatttaag gagtttgttc
     7981 atgaaaattt ttgagcaatt agctacaaag ctagagggta aaaaagtacg tatcgtattg
     8041 ccagaaggtg aagaaccacg tatcttgcag gcgacaaaac gtttggtaaa tgagtcggat
     8101 gtagtacccg tcttgcttgg aaacccagat cgtattaaga tttaccttga cattgaaggg
     8161 attacagaag gttttgaaat tattgaccca gctcattatg atagatatga tgagatggta
     8221 gctgctttgg tagagcgccg taaaggtaag gtatcagaag agcaggcaca tgagttgttg
     8281 aaagatgtta actactttgg tgttatgttg gtatatatgg gcgtagtaga aggtatggta
     8341 tctggtgcga ttcattcaac cgcttcaaca gttcgtccag ctcttcaaat cattaaaaca
     8401 gagccaggtg tatcgaaaac atcaggtgcc ttcttgatgg taaaaggtga agagcgttat
     8461 atttttggtg actgtgctat caacattgat ccagatgctc aaaccttggc agaaatcgct
     8521 atcaactcag cacgtactgc taaaatgttt ggtattgatc caaaagttgc aatgctcagc
     8581 tattcaacaa aaggatctgg ctcaggtcct aaagttgata aggtggttga agcaactaaa
     8641 attgctcaaa aattgcgtcc tgagttggat ttggacggtg aattgcaatt tgatgctgcc
     8701 tttgttccta ccacaggtaa attaaaagcc ccaggttcga gtgttgctgg tcaagcgact
     8761 gtatttatct tcccaggtat ctcagctggt aatattggtt ataaaattgc cgaacgtatg
     8821 ggtggatttg cagcggtagg tcctgtttta caaggtttga atcagcctgt aaacgacttg
     8881 tctcgtggtt gtaaccctga tgatgtttac aacttgacct tgattactgc ggttcaggct
     8941 ttggagcacc gttaatatga aatttttatc acgatatttt aaggactata ttaaggaatc
     9001 catattaggt ccagttttta aactattgga agcttgtttt gagcttttgg taccattaat
     9061 tatcgcctat atcgttgata caattattcc aaatggcagc cagggaaacc tggttgctat
     9121 gcttttttta ctggttggta tagcatgtat tggaattatt gtttcactaa tagcgcaata
     9181 ttattcagct aaagcagcgg ttggtgtgac taaagagctg acgaatgact tgtatcagaa
     9241 ggttctttcc cttcccaagt ctagccgaga tattctttcc tcatccagct tgctgacacg
     9301 attgaccagt gacactttac aaattcaaac gggtattaat acttttcttc gtttgttttt
     9361 acgtgctcca attgtcgtat ttggttcgct catcatggca ttctatatta gcccaagtct
     9421 atctgcctat tttctaggaa tgattatcct attgattttt atagtgacag tcatttctgt
     9481 tatgaccagc cgtatttatc aatcgatgcg aaaagaatta gatggtttgg tggggcaggt
     9541 acgtgagaca gtgactggtt ggcgagtgat tcgtgcattt ggacaaagag agcgggaaat
     9601 taaggctttt caaggcataa atcagattta taagaagcaa cagttgcagg ctggtttttg
     9661 gtctagtctt ttatcgccat tgacattttt agtggttaac ggaaccttac tcattctcat
     9721 ctggcgggga aatatagcca tttcacacaa tttgttggaa caggggatgt tggtcgctct
     9781 catcaactac cttcttcaaa ttttagtcga attggtcaag atgattatgg tcgtgtctac
     9841 tctcaaccag acctatattt cagcgcaacg tattcaagag atttttgacc aaacatctga
     9901 ggatgtagag tctagtttgc caaaagtggt tagtgtggat aaggaaatca tcttttctgt
     9961 gcgtcatctt tccttttctt atccaaaatc tgctgaggag tccctgtctg acattacttt
    10021 tgacttacgt aagggacagt ttatgggaat tatcggggga actgggtcag gtaagtccac
    10081 cctagtagat ttattgcagg cactctattc agtgcaaaca aatcagctct ctctcttcat
    10141 tgatggaaaa agtcctaaga atttaaaaga gtggcggcag caaattgcca ttgttccgca
    10201 acaggctcag ctttttactg gaactattcg ttctaattta tctttaggat tggaagaaat
    10261 atctgatagt gacttatggt ctgcattaga aatcgcacag gctaaatctt tcatagagga
    10321 taaaggtggt ttggatagcc ctgtcgaagc ctttgggaag aatttttctg gtggacagcg
    10381 tcaacgtttg accattgcac gcgctatttt acagaaagca ccgattttaa tcttggatga
    10441 tgcgacctct gctctggatt atttgacgga gagtcggtta ttagtggcta ttcgccagga
    10501 attaccaggt cagaacttaa tcatggtgtc acaaagaacc aatagtttac ggacagctga
    10561 tcagatttta gtcttggaac aagggcgtca agttggactt ggtcgccatg aggacttact
    10621 gagaagctct gctatttatc aagaaattca ccaatcgcaa caacaaggag aggaggatag
    10681 ctatgagaca atctagtttt aaggaactgg tcagattggt tttacaccag ccccttcgaa
    10741 tgtccttgat gttggtagga actttggtgc aagtccttct gacagtttat ctgcctatct
    10801 tgattggtca ggcagttgat gcagtattga tagcaaatgg tcaggtcttg ctcggtagct
    10861 taggcaaaat ggtgatggtt atcttgctta atacgctggt gcaatggtat ctcccactag
    10921 taaccaatcg cttggtttat ggaatggtgg ccgacttgcg tgaacaggtc tatgtgaagc
    10981 tgcaccagat gcccctatct tatctggatc gtcaatcagt tggtgattta gtagctcgtt
    11041 tttcaagtga tagtgagcaa ttaaccaacg gactcttgat gattttcaat caatttttca
    11101 taggtatctt gaccattttt ctaactattt tcactatggc taggcttgac ttgacgatga
    11161 tgttggttgt tgttgccctg actccggttt ctctgcttgt ggcacgctat atcgctaaga
    11221 aatcctatgg ttattatagg caacagactc aggcacgtgg gaggcaatct cagcttttgg
    11281 aagagtccat cagtcaattg acactggttc aatctttcaa tgctcaagag caatttacgc
    11341 aaggttttca agttgtgaat gaccagtatg cgacctattc tcaacaggct atctttgcct
    11401 cttcaacggt caatccaagt acgcggttta tcaatgctat tatttatgcc ttacttgcag
    11461 gacttggagc gctgagaatt atggcaggaa attttacagt gggatctctg acaaccttcc
    11521 tcaattatgc tagtcagtac agcaagcctt ttaatgatat ttcctcggtc ttatcggaat
    11581 tgcagagcgc cttagcttgt gcagacaggc tgtttgctat cttggctcta gatagcattg
    11641 atgatcaggc tgagcggaaa attgattcag aggagttgaa gggagctatt tcctttgaga
    11701 atgtatcttt ctcatatagc cctgaacgtt ctctgataga acatctggac attgatgtca
    11761 aagctggaca aaaagtagcc attgttggac ctactggtgc tggtaaatca accatgataa
    11821 acctcctcat gcgtttctac gatgtgacgg ctggtcagat tcttttagat ggggttccga
    11881 ttaaccagta cagtcgtgag gatctccgca gacagattgg gatggtttta caggagacat
    11941 ggatcaaatc tggtaccatt catgataata ttgcctatgg ctatccaaat gctacgcggg
    12001 aattggtcat tgaggcggct aaggcagcta atgcagactt ctttattcgt cagcttccgc
    12061 agggttacga tacggttttg gcagatggag gagaaggctt atcccagggg caacgtcagc
    12121 ttttgtctat tgcgcgtgtc tttgtcaaga tacctaaaat cctgatttta gatgaggcga
    12181 cttcctctat tgatacacgg acagaaattt tagtacagga agcatttgcc aaattgatgg
    12241 aaggacggac cagttttatt attgctcatc gcctatcaac cattcaatca gctgacttga
    12301 ttttggtcat ggtggatgga aaaattgttg aataagggaa tcatgaagcg ttgatggctg
    12361 aacaaggcgt ttattatcaa atgcaaacaa gccagcagac agaggaggat gaacgtgtta
    12421 gataaattag acttacaacc tattacagtt ttagatgact atcaagctac aatgctcaat
    12481 gagaaagagg tgctactgac tacaaaggtg actgaaaagt ctctcaatcc atacggtatg
    12541 gcacatggag gctttctttt cacattggca gattcagttg caggtctgac aacggtagca
    12601 aggggttctt attctgtcac cctacagtcc aatatccatt atatgaaggc agctaaactt
    12661 ggtgatacct tatcagtaat aggctcttgc acacatgatg gaagtagaac aaaggtcgtc
    12721 gaagttaaga tagaaaatca agataaacag ctacttgctt cagcaagttt taccatgttt
    12781 gtaacaggaa aagtagaata aaactcttcg aacatcaaaa gcagacagtc ttggctagat
    12841 ttagagaaac aaattcattc gctctatttc caacttccca agtttcccca aacctttgta
    12901 gaaacgaact tcgttcgctc tatttccaac ctccaaaggt tccccaaacc tttggagcta
    12961 atttgatttt gattataaac gatataaggg agttggcaaa agctggctcc ctttctttgt
    13021 gttatactag atgtatgtta aatttgaaag aatatggaat cgaaatgtgg ccggaggaaa
    13081 agattcaagc ttttcgcaag gcactcttag attggtatga tgccaataaa cgtgatttgc
    13141 cttggagaag gaccaaggat ccgtatgcta tatgggtttc tgaaatcatg cttcaacaga
    13201 caagagtaga cacggtcatt ccttattatg aacgttttct ccatcacttg ccgacgatta
    13261 gtgatttagc acaagcacca gaggaggtca ttctcaaact ctgggaggga ttgggctatt
    13321 attcgcgcgt gcggaatatg caaaaggcag cgcagcaaat ggtagaagat tttgatgggc
    13381 aatttccgac cacgcataca gccatttcaa gcctaaaggg cattggtccc tatactgctg
    13441 gagcaatttc cagtattgct tttaatttgc cagaaccagc ggtagatggc aatgtgatgc
    13501 gggttctcag ccgcttgttt gaggttgatt atgacattgg tcttcctgcc aatcgcaaga
    13561 ttttccaagc aatgatggag ctattgattg atccagagcg accgggcgat ttcaaccaag
    13621 ccctgatgga tctggggtcg gatattgaat cgccagttaa tccacgtccc caggacagcc
    13681 cagtcaaagc ctttagcgca gcctacttaa acggtacaat ggataagtat ccaatcaaag
    13741 caccaaagaa aaagccaatt cccgtggcct accagggatt tctcatcaga aataaagaca
    13801 atcaattttt attggaaaaa aataatgaag caggtcttct atcaggtttc tggtcttttc
    13861 cgcttttgga aaaaggagca atcgttgaaa aacaagtctc tctctttgaa gttgcagaag
    13921 aagttgttca gccagatatt cggcagagct ttacggaact ttatggtctg actgttgatt
    13981 ggcaagagca agaatttggc atcgtccagc acatttttag tcaccgcaaa tggcagatag
    14041 aaatggtgga aggtgtggca gaaacactta accttccaga atcaaaagaa ttgaaatggg
    14101 tttctgtaga agattttcct acctacccat ttgctaagcc gcaacaaaag atgtgggaaa
    14161 actttatcaa ggaaaaagaa aagcaaaaaa gttgactttg gagcacataa ttatttgaaa
    14221 gcgttttata atagtggtat aatctaattg aaaaaaggaa atagttagtc gagatgttga
    14281 acgccatctg aattgctgaa aggagttctt tagcgttcgt agaagtgtat atactattag
    14341 ccatctttct ctaataaaaa gagagggatg ctagtagggg aaaagtccgt tatccctgtt
    14401 ttatatctat ttgtgatatc cattgtcaaa tgcatagcat taactcatta tttagccttg
    14461 ctacccggtt caatcagaag taggctaaga ttattcgtgt cgtaactact atgtgttcaa
    14521 gatgttgtaa cttttgaaca taaccttaga aaatcacaaa aacctctagc gattttcatc
    14581 ataataagca atctccacac tttagacaaa tagtaagagg acaatcaaag acataagggt
    14641 agcagaataa ttatttaatc attaacttat tgtcaaataa ctatctggta atggactttt
    14701 ccaatttgac atataaaagg gaggctgtca tagcctcctt ttactgtgct tttcagtttg
    14761 ttttcagtag gaaaaaacgc cagctatacg aacagacttt ccaaaactag atggatgaat
    14821 gtagccaata taactagtga ttaactaggc ttagaaatca atctgaacta taaatatata
    14881 caacttgacc aataggtcga atatcgtctt ctgggctaaa atagatatca tcatagtcag
    14941 aattgagtga ttgcaaatag tcacctttga actttttaac aaaattttcc ccattgactg
    15001 aaaaaattcc aatcgtattt agaggaatat gaggagttag gcgaatgaag agatagtctc
    15061 catcctcgat atgcggagcc atagaatctc ccacaacctg agcgattgta tcataagatt
    15121 ggttatctgg aatctcatcg ttatagaatg atacaagatt gttcatatct gtatcctgcc
    15181 agtaacctgt accggcagaa accttaccag gaacaggtaa atcgattcgc tctcgatagt
    15241 cattcaagtg aagaatagaa gcagaaggag taactgaggt agtttgcata gctgctaact
    15301 gttcttgacc aaaagttaac cattgtgcat ggaaatcacc ttttaattca ttgtccaagg
    15361 tttgaacctc tggatgaata ggctgttgaa agagtttaaa ctgggaagga gtaatcgtta
    15421 aagcaatatc ctgattagaa tctagttgct cgattagctc accaaccgat atagccatgc
    15481 ccttagcgac tttttctagc gtatccatcg ttggcaggag agcttttttg gttttgggat
    15541 gctggttctt ttccaacata gaaatataac cttttgttaa accagataat tcagcgaatt
    15601 tatccattga taatttattc ttgcttcggt actcttttaa aatatcacct aaaatcatgg
    15661 ttgtctcctt atctgtttaa ctaattatac cattaaaaaa tattttttgc aaattttgtt
    15721 taacacgttt gacaaaaaat caaaacggtg ttatgataat ctcacaaaaa gaaaaatagg
    15781 agtcgcaaat gaaaaggatg acagagattt cttggaatga tatttataaa gagtgggaaa
    15841 cctatgctaa tcattttggt ttgacgactc cgataaatac tgaaaaattg cgagatcaga
    15901 aatcgaagga ttttggaaaa ggaagtctga ttacgctgga cttattagcc gattacgata
    15961 ctgattctga gaagaccgca gctatttggg tagcttcgtt ttgcagagat ttaatacaag
    16021 attacgcata tttactaaat ggtagagcct atcttacagt caatcagatt tattttcagg
    16081 cactcaaaca attccagtca gaagcggtaa tatggtcaaa acctctcaca cgattgcaac
    16141 cgaagttatt tgtctcttat cgtttgttgg aaaatcttga tttgagtcat tattcttgtg
    16201 tagttgagtt agcaatgttg caggctagta tggttcggac acagatatta gaaaagtaat
    16261 tatagtagga gaatgaaaat gtttgatttg ttgaataaga aagctgaagt atcgaaagtt
    16321 gcagagtatt ggaatgatac tttgatagaa agaggaattt tgagcgctga tgaattgctt
    16381 gaaggaaaat gttggagatg taaaagttct catggtgtag ctgtgtgtca gattgtatca
    16441 agcaaatgga gcaaggatac gagcctggct aatcagatgg tcctatgtct atcctgtcag
    16501 catgaaaaac ctaatgtagc tgatacagaa attgtgtggc aatggttaga agttgagaat
    16561 aatgaacgtt actggactct acaaggtatg gcagaatatg agaaaatgta taaaaaatcg
    16621 gtacttcaag agttatggga tatgggaatt agagatggtg aagaagtcga gacgcttgta
    16681 aataaagtaa ctagcctttc tcgtaagaat ggtattgttt taaatagagc aaccttagca
    16741 ggattatttc gctgtgaaat tgaacaaatg cgtcgaaagg catttttaaa ttggacagga
    16801 atttttaagc tagtcagtta actgatgcag ttgtaggaaa acatctcatg ctgattggag
    16861 taacagataa ataaaaagcg catcagctta gaatcttaaa gaaagaagtc taatgatgcg
    16921 tttatgggat tatatttcag ctaataaaaa ttggagtgaa tgtttttgaa ttatagctat
    16981 tgaaatcagg gaggttattc gatgttagaa ataaaacgat tctcctttct agaaaatcgg
    17041 taaccgcaat gttgacaatg ataataagtc cgatcagctt catagagcat tgcaaacata
    17101 gctccctcta tgccattgat tgcatgacca atcataccgg ctttacgaga atatcttttt
    17161 tgtgttggaa cgtaagtttg cagttttatt gacttacatt ttggacattt gagcgcttgt
    17221 ttagtgtcca tattattagg atggcatctg cgatagatgc tataagagat tattagtact
    17281 atgaggataa tcggaccgat atattctatt aaggtattca taatcttatt gtaaatcttg
    17341 tccttatttt attcaaggaa aatgaatatt attttttcta aaataacgga tcctatggct
    17401 atagttgtta actatacata tctctaatgt ttaagtatta gtcaagatgg taaaaatgag
    17461 gtagaataca gaaaaagacc aaaggagtac ctttatgact agagaatttt catttgaaac
    17521 ccttcaactc catgctggac aagaagttga ttctgcttca aaatcacgtg cagtacccat
    17581 ctatcaaacc acttcctatg tttttgaaga tgctcaagaa gcagaagatt tatttgcctt
    17641 gcgtaaatca gggaatatct atactcgtat cactaatccg acggtctcta cttttgaaaa
    17701 tcgtgtagca gctttagagg gtgggattgg tgccttggcc acttcttcag gaatggcagc
    17761 tatcacctat actattctag cgttggcaca tgctggggat catattgtag cagcgacaac
    17821 tctctatggt gggaccttta atcttttcaa agaaaccctt cctcgctatg gtattacaac
    17881 aagctttgta gatattgatg attttgaagc ggtagaagct gcgattcaag ataatacaaa
    17941 acttgtattt attgaaacct tgggaaatcc tgttatcaat attcctgatt ttgaaaaatt
    18001 ggcagaaatt gcacacaacc accacatccc gcttgtttca gataatacct tcgcaactcc
    18061 atatttgatt aatgtatttt ctcatggtgt tgatattgcc gtccattcag caaccaagtt
    18121 tatcggtggg catggtacga ccattggcgg tgtgattgtc gatagtggca agtttgattg
    18181 ggcggcatct ggtaagtttc cgcaatttgt tgaagaagat ccaagctatc ataacattag
    18241 ttatactcgt gatattggtg ctgcagcatt tattgtagca gttcgtgtac aattacttcg
    18301 tgatacaggt gctgcgcttt ctccattcaa cgccttcttg cttttgcaag ggttagaaac
    18361 cttgtctctc cgtgtagagc gtcatgtatc taatgctgaa aaaattgttg actttttact
    18421 tagccatcct caggtagagt cggtcaatta tccatcactt ccagatagtc cttataaggc
    18481 tttggcggat aagtacctgc ctaagggagt tggctctatt ttctctttcc aagtaaaagg
    18541 cggagcagaa gaagcgcgta aggttattga tagtttggaa atcttttcca atttagcaaa
    18601 cgttgccgat gctaaatcac tagtagttca tccagctaca accacgcatg ctcagttagc
    18661 tccggaagat ttacttgctg ctggggtcac accaaatcaa atccgcctat ctgttggtct
    18721 tgaaaatatc aatgatttga ttgaagattt gcaact
//
LOCUS       DBNFCX010000038        18512 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.038, whole genome shotgun sequence.
ACCESSION   DBNFCX010000038 DBNFCX010000000
VERSION     DBNFCX010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 18512)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18512)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18512
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.038"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            46..879
                     /locus_tag="AC1PJC_001181"
     CDS             46..879
                     /locus_tag="AC1PJC_001181"
                     /inference="COORDINATES: protein motif:HMM:NF027453.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4839 domain-containing protein"
                     /protein_id="HIP6620172.1"
                     /translation="MLKKFLFLCLAFFASFSLVACGSSSEPTNTNKIAIPVGSSPEEA
                     DYQSVQKQLEDAGFENVSTQKIEDLTFGIFTKDGEIEKITVKGTDSFSEGDLFEKDTP
                     ITIHYHTFKNYDSSEESSASSSEESSSNLEPSSSGSEQEVSAETSTSQTDSQEQVITP
                     DNPEFAYILNNFDEAKTQEFVEKYKGQIVEFDGHVAYMHSHENYKTRFDFLLNVGDWE
                     EGNYVGMMAFENLAFHELKFVDETDTVSTGTNLHIKARIINAAKKGQLIYLEPVELRS
                     R"
     gene            964..2025
                     /locus_tag="AC1PJC_001182"
     CDS             964..2025
                     /locus_tag="AC1PJC_001182"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011681620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HIP6620173.1"
                     /translation="MQKRLEKFKAKLAQSTVDGILVTGQNNIYYLTGFWGTEATVFIS
                     GKRRLFVTDSRYTLIAKASVKGFDIIESRFALEEIAKVIKEDGLEKIGFDSEVTYGFY
                     QSLTSIFEGYQLVAMSNFIEDLRMIKDEKEIATIRRACQISDQAFIDVLDFIKPGQTT
                     EMDVNHFLDHRMRQLGAEGASFEFIVASGYRSAMPHGRASEKVIQAGETLTLDFGCYY
                     QHYVSDMTRTIHIGHVTDQEREIYDAVLRANKALIEQAKEGVTYREFDAIPREIINAA
                     GYGANFTHGIGHGIGLDIHEYPYFGKSDETIKAGMVLTDEPGIYLDDKYGVRIEDDLL
                     ITENGCEVLTLAPKELIVI"
     gene            2089..2646
                     /gene="efp"
                     /locus_tag="AC1PJC_001183"
     CDS             2089..2646
                     /gene="efp"
                     /locus_tag="AC1PJC_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000568636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HIP6620174.1"
                     /translation="MIEASKLRAGMTFEAEGKLIKVLDASHHKPGKGNTIMRMKLRDV
                     RTGSTFDTTYRPDEKFEQAIIETVPAQYLYQMDDTAYFMNTETYDQYEIPVATIKEEL
                     LYILENSDVKIQFYGTEVIGVTVPTTVELVVAETQPSIKGATVTGSGKPATMETGLVV
                     NVPDFIEAGQKLVINTAEGTYVSRA"
     gene            2674..3066
                     /locus_tag="AC1PJC_001184"
     CDS             2674..3066
                     /locus_tag="AC1PJC_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp23/Gls24 family envelope stress response
                     protein"
                     /protein_id="HIP6620175.1"
                     /translation="MTTEYQGEIVIAPRVLEVITGIAAAKVDGVHSLQNKRVADSWSK
                     TSLNKGVYLETDEEGRVTADIYVYLEYGVNVPAVSMDIQRAVKTAVYNYAEVQVAAVN
                     IHVSGIVPDKTPKPALKDLFGEDFLDEE"
     gene            3056..3475
                     /gene="nusB"
                     /locus_tag="AC1PJC_001185"
     CDS             3056..3475
                     /gene="nusB"
                     /locus_tag="AC1PJC_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HIP6620176.1"
                     /translation="MKNNRHALRKCALQAIVSLEFGQEPVQAAQFSYLYDREEEQEGV
                     EIPLFLLNLVNGVADYRDDLDKELSSRLKAGWTLDRLTLIDKNIMRLGLFEILHFEET
                     PDRVAVNEAIELAKEFSDESSAKFVNGVLSQFIKEEA"
     gene            complement(3555..4520)
                     /locus_tag="AC1PJC_001186"
     CDS             complement(3555..4520)
                     /locus_tag="AC1PJC_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002929307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HIP6620177.1"
                     /translation="MVAKLTDVAQLAGVSPTTVSRVINKKGYLSEKTIRNVEEAMREL
                     GYKPNNLARSLQGKSAKLVGLIFPTINNIFYSELISHLEKELFDRGYKTIICNSQHES
                     DKEREYLEMLAANQVDGIISGSHNLGIQDYDRVVAPIIAFDRNLSPSIPIVSSDNFAG
                     GVLAAQTLQKAGCHNPLMITGNDDSNSPTGLRQVGFTSILNKAEVFHISSDFSPVRKE
                     MEIRAILEKQKPDGIFVSGDATAMLVWNVIRSMKLSIPEDIKLIGYDGTSFIENYYPQ
                     LTTIKQPLTEIARLLVELLVDKIEGKKLTKTDYILPISLLAGASI"
     gene            complement(4501..5955)
                     /locus_tag="AC1PJC_001187"
     CDS             complement(4501..5955)
                     /locus_tag="AC1PJC_001187"
                     /EC_number="3.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000455313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004564 - beta-fructofuranosidase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sucrose-6-phosphate hydrolase"
                     /protein_id="HIP6620178.1"
                     /translation="MAFTTEERYRAYADWTPEYIEKIKKNTESSPWRTNFHIETPHGL
                     LNDPNGFSYFNGKWTLFYQYFPFGAAHGLKSWVHTESTDLVHFEETGTVMYPDTPLDS
                     HGAYSGSAMEFGDKLFLFYTGNVRDENWVRHPYQIGALMDKDGKIEKIDKVLIEQPED
                     TTDHFRDPQIFNYKGQYYAIVGGQNLDKKGIVKLYKAENNDYLNWSYVGDLDFANDMT
                     AYMMECPNIAFVGEQPILLYCPQGLDKEVLDYGNIYPNMYKIGQSFDPETASIVEPSE
                     LINLDYGFECYATQTFNAPDGRTLSVSWLALPDVEYPTDAYDYQGCLSLVKELTIKDG
                     KLYQYPVDAITSLRKEAQPFSAQKETNNVYELELDFSAGAKHEIVLFANEAEKGLVLS
                     VDTEQGQITLDRGNCGQPFALDFGTSRSCEISPGALTANIFIDKSVFEIFINKGDKVF
                     SGRVFPDADQSGIVITTGNPTGTYYHLDYGRKTN"
     gene            6160..8049
                     /locus_tag="AC1PJC_001188"
     CDS             6160..8049
                     /locus_tag="AC1PJC_001188"
                     /EC_number="2.7.1.211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sucrose-specific PTS transporter subunit IIBC"
                     /protein_id="HIP6620179.1"
                     /translation="MNNTEIAKKVIDALGGRENVRSVAHCATRLRVMVVDEGKIDKDT
                     VEDIEKVQGAFFNSGQYQIIFGTGTVNKIYDEVVALGLPTATTGEQKAEAAKQGNAFQ
                     RAIRTFGDVFVPIIPAIVATGLFMGLRGLLGALGYTLPEDLNVYSQILTDTAFIVLPA
                     LVVWSTFRVFGGNQTIGIVLGMMLIAGQLPNAWVVASGGDVKPTIFFGFIPVVGLQGS
                     VLPAFIIGLIGAKFEKAVRKVVPEVLDLLVTPFVTLFVMSILGLFVIGPVFHVVENYI
                     LAGTQAILNLPMGLGGLLIGGVHQVIVVSGVHHIFNFLEAQLVANTGANPFNAIITAA
                     MTAQGAATVAVGVKTKNPKLKALAFPAALSAFLGITEPAIFGVNLRFRKPFLLSLVAG
                     AIGGAVASLLGLAGTGMGVTIIPGLTLYAGNGQILPYILMVAVSFALGFALTYLFGYE
                     DEEKEVKKPSASAQETAETLEEAETGLVAEETLVSPLSGDVVALENVNDPVFSSGAMG
                     KGLAVKPSEGVVYAPADAEVTIAFETGHAYGLKTASGAELLIHIGIDTVSMNGNGFEK
                     LVAAGDKVKAGTPIAKFDAAKIAEAGLDDTTMIIVTNTADFAEVSPLAEGTIAHGVEF
                     LKVAK"
     gene            8177..9058
                     /gene="scrK"
                     /locus_tag="AC1PJC_001189"
     CDS             8177..9058
                     /gene="scrK"
                     /locus_tag="AC1PJC_001189"
                     /EC_number="2.7.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003086609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008865 - fructokinase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fructokinase ScrK"
                     /protein_id="HIP6620180.1"
                     /translation="MTKLYGSLEAGGTKFVCAVGDENFQVVEKTQFPTTTPYETIERT
                     VEFFKRYEDRLAGIAIGSFGPIDIDQNSQTYGYITSTPKPHWSNIDLLGLIAKEFNIP
                     FYFTTDVNSSAFGETLVRKGVKSLVYYTIGTGIGAGAIQNGEFIGGLGHTEAGHTYVA
                     LHPYDVKHEFKGMCPFHNGCLEGLAAGPSLEGRTGIRGELIELNSDVWDVQAYYIAQA
                     AVQATLLYRPQVIVFGGGVMAQEHMLNRVREKFVGLMNDYLPTPDVKEYIVTPAVAEN
                     GSATLGNFALAKQVSEK"
     gene            complement(9100..12330)
                     /locus_tag="AC1PJC_001190"
     CDS             complement(9100..12330)
                     /locus_tag="AC1PJC_001190"
                     /inference="COORDINATES: protein motif:HMM:NF019216.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ZmpA/ZmpB/ZmpC family metallo-endopeptidase"
                     /protein_id="HIP6620181.1"
                     /translation="MYTKKIALKQLAISSTTVAIVSSLWGSQPPIVYANDASTVSVQY
                     HYIAQDELTSSEKDSVLSKLKTVSPSKETATENQTIYLIYKTEPKKIFGILPATGETG
                     INLLTIGGGLLLVLGISLAGKGKKRRIISSILLLTATGSILPIQSIQALESNLLAGYN
                     QVHQLKVGDQLPDPSNIKQYQYVGYVTDKDIGPQSTENKESSSTTASSQQQDSTDSAI
                     NNETLLFNLKKLDPTSDNQQLKKAANNIGADHKLASSKTISLVPMADKAIISDIQGRE
                     ENINTLLAHFEDGSTLFFPLQYTENKDKRAYYQVADWGVTYSPLQTLQDYSDILDKVV
                     PSLQAVEFRSENMYTALSITENQEQQMDRLYLEEPFNKVKTNIRDYLKKALINDESVK
                     LDDPESVTQTIRTIEENKEIILLSLAYLDRWYDIDYGEINSKELTMFHTDFFGGEADA
                     LDALITFGQNDYQSYSPQRSYFSYAENFASVTDKASLTDFLEAYREIFLPEMSDNDWF
                     KQTTDAFIVETKSTVLSDEDNSRLNVYERLKDPQIPEEVITPRIRDTYPNMLLPLLTT
                     SEDNVYIISNLSNLIFSSYDRYIDQSLKLSNPEVYQAELSKIKEQILADAELYRAHYD
                     MWYRILPDYHKHTLLYFQPVWGGHGNYAYDASSYAWKGVWYSDTGKLTPEFVEKMQND
                     ATAETTAAIQEVFGPSGTYFLPELTWAGAYAWRQEVNFVITPLLGTDGAVTLTHEMVH
                     AFDYDKFLLDHNRRAGMQLEAFPEGMLQAPDRVDYPIIGFNSLSDYSGHTGTRYHNVS
                     PERFQNSADLQQYMQGLFDLIYTLEYAEGTAILKQDKDTQRQWFHKLETKEKLIPGAE
                     EYGPYGVNLKRDFTDEEWNSIELKTVDDLVDNDVTVRRESANRIERDPDNPEEVMNNG
                     YHKLSLFAPIWATATTERVPGDLSFRRTAFELLAEKGYENGMVPYMSNQYKQADSDVV
                     PDSLIFANILPEYNGDYKTFKKAMYQERVQKLAFLKPVTINYDGQELTVANYEQLQEL
                     MDQAVLADVVAGNFTTENTKVSELKGLLHDAYLKLTDDYRTSIFTE"
     gene            12683..15208
                     /gene="secA"
                     /locus_tag="AC1PJC_001191"
     CDS             12683..15208
                     /gene="secA"
                     /locus_tag="AC1PJC_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HIP6620182.1"
                     /translation="MVTNVLRSLIENDKGELRKLEKMADKVFSYADEMEALTDEQLQA
                     KTAEFKERYNNGESLDDLLYEAYAVVREGARRVLGLYPYKVQVMGGIVLHNGDVPEMR
                     TGEGKTLTATMPVYLNALSGQGVHVVTVNEYLSTRDATEMGELYSWLGLSVGINLAAK
                     SPLEKREAYNCDITYSTNSEIGFDYLRDNMVVRAEDMVQRPLNYALVDEVDSILIDEA
                     RTPLIVSGAQGSETNQLYFLADNLVKSLTTEDYIIDIPSKTIGLSDSGIDKAEKFFKL
                     DNLYDIENVAITHFLDNALRANYIMTYDIDYLVNEDQEVMIIDPFTGRTMEGRRYSDG
                     LHQAIEAKEGVPVQNESKTSASITYQNLFRMYKKLSGMTGTGKTEEEEFREIYNIRVV
                     PIPTNRPIARVDHEDLLYPSLEYKFNAVIADVKRRYEKGQPVLVGTVAVETSDLISQK
                     LVAAGVPHEVLNAKNHYREAQIIMNAGQRGAVTIATNMAGRGTDIKLGPGVRELGGLC
                     VIGTERHESRRIDNQLRGRSGRQGDPGESQFYLSLEDDLMKRFGSERIKVFMERMNLT
                     EEESVIKSKMLTRQVESAQKRVEGNNYDSRKQVLQYDDVMREQREIIYRQRQDVITAD
                     RDLAPEIKAMMKRTIERQVAGHFLGSKDEAIDGIIKFAHANLVEDDTLSKATFEAMNQ
                     KEIVEELYERALRVYDSQVKKLRDEERVREFQKVLILRVVDNKWTDHIDALDQLRNAV
                     SLRGYAQNNPIVEYQSEAFTMFNDMIGAIEFEVTRLMMKAQIHDNIERERTSQEAHTT
                     AVKNIMPNQSHAIQENVSFEGVDRNDPCPCQSGKKFKNCHGRK"
     gene            15323..15682
                     /gene="acpS"
                     /locus_tag="AC1PJC_001192"
     CDS             15323..15682
                     /gene="acpS"
                     /locus_tag="AC1PJC_001192"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HIP6620183.1"
                     /translation="MIVGHGIDLQEMEAIESARIKHQGFPKKILTEKEFERYQSLSGR
                     RQLEYLAGRWSAKEALTKALGTGIGKIGFHDIEILNTSKGVPYVTKSPFDGNIWLSIS
                     HSGNFVQASVILEEKDD"
     gene            15675..16778
                     /gene="alr"
                     /locus_tag="AC1PJC_001193"
     CDS             15675..16778
                     /gene="alr"
                     /locus_tag="AC1PJC_001193"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011226530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HIP6620184.1"
                     /translation="MIESEHRPTQIRVNLDAIAENFEQVMTNLPPKTEAFAVVKANAY
                     GHGAVAVAKKLSSQAAGFCVSNLDEALELRKAGIEHPILILGVVPVRFLPVAHQLNIS
                     VTVASLDWLQDAKDLEADLSGLTVHLKLDTGMGRIGFRKIADLLQAIAILEELEYDIE
                     GVYTHFATADEVDQAHFESQLSVFKEFLDVLPITPRWIHASNSATSIWHADTVFNLVR
                     LGNILYGLNPSGRVLELPFDVQPALSLVSEIVHVKQVEAGTTIGYGATYHSTDSEWIA
                     TVPIGYADGLVRSLQGLSVLVDGQACEIVGRISMDQITIRLPHAYPLGQKVTLIGQDG
                     DKTISVQEWADRIGTINYEVVCLLTDRLPRIFE"
     gene            complement(17247..>18512)
                     /locus_tag="AC1PJC_001194"
     CDS             complement(17247..>18512)
                     /locus_tag="AC1PJC_001194"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HIP6620185.1"
                     /translation="RFVVVSAPGKRNAEDTKVTDALIKYYKKYVNGKDVTASQEWIIN
                     RYQAMVDELGFTANSMKKIADSIISLASLPIDDNEFLYDAFLAAGEDNNAKLIAEYFT
                     HRGLPARYVHPKKAGIIVSSEPGNARILPSSYDKIEELRDTDEVLIIPGFFGVTVDNQ
                     ICTFSRGGSDITGSIIAAGVKADLYENFTDVDGIFAAHPGIIKNPHSIKELTYREMRE
                     LAYAGFSVLHDEALLPAYRGRIPLVIKNTNNPTHPGTRIVHKHTEQTVPVVGIAADDG
                     FVSINLSKYLMNREVGFGRKVLQILEDLNIRWEHMPTGIDDLSIVVRERELTPIKEEE
                     ILRQLNTKMEVDKAEIEHGLSIIMIVGENMKSHVGVTATATTALSKQNVNLAMISQGA
                     SEVSVMFVVKTEEKKRALHALYEAFFNEQ"
BASE COUNT         5319 a         3463 c         4112 g         5618 t
ORIGIN      
        1 atagagtgta gtaaaatata gctagcaaca aataaaggag caattatgtt aaagaaattc
       61 ttgtttttat gtctagcctt ttttgcaagc tttagtttag tagcatgtgg cagcagtagc
      121 gaaccaacaa atacaaataa aattgccata ccagttggtt ctagtcctga ggaggctgac
      181 tatcagtctg ttcaaaagca attagaggat gctggttttg aaaatgtatc aacacagaaa
      241 attgaagatt tgacttttgg aatttttacc aaagatgggg aaattgaaaa gattacagta
      301 aaagggacgg atagtttttc ggagggggac ttgtttgaaa aggatacgcc tataaccatt
      361 cattatcata cgtttaaaaa ttatgatagt tctgaggaga gttcagcaag tagtagcgaa
      421 gagagtagtt caaatttaga accctcctct tctggctctg agcaggaagt aagtgctgaa
      481 accagtacaa gtcagacaga ttcacaagaa caggtaatta ccccagataa tccagagttt
      541 gcctatattt taaataattt tgacgaggcc aaaactcaag agtttgttga aaaatataaa
      601 ggacaaattg tagaatttga tggacatgtt gcttacatgc attctcatga aaactataag
      661 accaggtttg attttctgct caatgtgggt gattgggaag aagggaatta tgtaggaatg
      721 atggcgtttg agaatcttgc tttccatgaa ttgaagtttg tagatgaaac tgatacagtt
      781 tctacaggga caaatttaca cattaaagct aggattatta atgcggcgaa aaaaggtcaa
      841 ttaatctact tagaacctgt tgagcttcgt tcacgctaat tataaggcta ctgtctgtag
      901 gcagtagttt ttcttatcta atattttctg ctataatagt tacaaaatct tcggaggaat
      961 aggatgcaaa aaagacttga aaaatttaaa gcaaaattag ctcaatcaac tgttgatgga
     1021 atcttggtaa ctggtcaaaa caatatttac tacctgacag gtttttgggg gacagaggcg
     1081 actgtcttca tcagtggcaa acgtcgcttg tttgtgactg attcgcgtta taccttgata
     1141 gccaaggcat cagtaaaagg ttttgatatt atcgagagcc gttttgccct tgaagagatt
     1201 gcaaaggtga ttaaggaaga tgggcttgaa aaaattggtt ttgatagcga ggtgacctat
     1261 ggtttctatc aaagtctgac cagcattttt gagggttatc aactggttgc tatgtcaaac
     1321 tttatcgaag acttgcgcat gattaaagat gagaaagaaa ttgcgaccat tcgccgtgca
     1381 tgtcaaattt cggatcaggc ttttattgat gttcttgact ttatcaaacc aggtcagacg
     1441 actgagatgg acgtcaatca tttccttgac caccgcatgc gtcaactcgg tgcagaaggg
     1501 gcatcatttg agttcatcgt ggcatctggc taccgctctg ctatgcctca tggaagagcg
     1561 tctgaaaagg ttatccaagc tggtgagacc ttgacgctgg attttggttg ctattaccaa
     1621 cattatgtca gcgatatgac gcgtaccatt catatcggac atgtgacaga ccaagagcgt
     1681 gagatttacg atgcggtctt gcgtgccaat aaggctttga ttgagcaggc caaggaaggt
     1741 gtcacctacc gcgagtttga cgctattcct cgtgagatta tcaatgcggc gggttacgga
     1801 gccaacttta cacacggcat cggtcacggt atcggtttgg atattcatga atatccgtat
     1861 tttggaaaat ctgacgagac tatcaaggca ggtatggtct tgacggatga gcctggtatc
     1921 tatttggatg acaaatacgg tgtccgtatc gaagatgacc tattgattac ggaaaacggt
     1981 tgtgaagtct tgacattagc acccaaggaa ttgattgtca tttgagaaat ttgacagttt
     2041 gtggtagaat aaaacgaata aataaaattt gaagaggtat tcaatacaat gattgaagca
     2101 agtaaactta gagcaggtat gaccttcgaa gctgaaggta aattgattaa agttttggat
     2161 gcaagccacc acaaaccagg taaaggaaac accatcatgc gtatgaaatt gcgtgatgta
     2221 cgtacaggtt caaccttcga tacaacttac cgtccagatg aaaaatttga acaagctatt
     2281 atcgaaacag ttccagcaca gtacctttac caaatggatg acacagctta tttcatgaat
     2341 actgagactt acgatcagta tgaaattcca gtagcgacta tcaaagaaga attgctctat
     2401 atcttggaga attccgatgt gaagatccag ttctacggaa cagaagtgat cggtgttact
     2461 gtaccaacaa ctgttgaatt ggtcgttgca gaaacacaac catctatcaa aggtgcgact
     2521 gttacaggtt caggtaaacc agctacgatg gaaacaggtc ttgttgtcaa cgtaccagac
     2581 tttatcgaag caggtcaaaa actcgttatc aacacagctg aaggaactta cgtatcacgt
     2641 gcttaatcgt ttcctcttaa gaaaggagag cctatgacaa cagaatatca aggcgagatt
     2701 gttatcgcac ctcgcgtcct tgaagtaatt acaggcattg ctgcagcgaa agttgatgga
     2761 gtgcattccc ttcaaaataa gcgtgtagca gacagttggt caaaaacatc gttaaataaa
     2821 ggtgtttatc ttgaaactga cgaggaaggt cgagtgactg cggatattta cgtctatcta
     2881 gaatatggtg taaatgttcc tgccgtatca atggacatcc agcgtgcagt caagacagca
     2941 gtttacaact atgcagaagt tcaagtggct gcggttaata tccatgtcag cggcattgtt
     3001 cctgataaaa caccaaaacc agcattgaaa gatttattcg gagaggattt ccttgatgaa
     3061 gaataataga catgccctgc gtaagtgtgc tttgcaggca atcgtatcac ttgaatttgg
     3121 tcaagaacct gttcaggcag ctcagttttc ttatctttat gatagagaag aagagcaaga
     3181 aggagttgaa attccgctct ttctccttaa ccttgtcaat ggtgtagcag actatcgtga
     3241 tgacttggat aaggagttat ctagccgatt aaaagcagga tggaccttag accgtttaac
     3301 cttgattgac aagaatatca tgcgactagg cctatttgaa atcttacatt tcgaagaaac
     3361 gccagaccgc gttgctgtta acgaggctat tgaattggct aaagaatttt ctgatgaatc
     3421 ttcagctaag tttgttaatg gagttttgag ccagtttatt aaagaagaag cctgatgagc
     3481 ttctttttta cttgagaaat aagagaatgt atcacaaaaa agctgcacct aatttttatt
     3541 aggtacagct ttttttatat actagctcct gctagtaggc taatcggcag gatatagtct
     3601 gtttttgtca gtttttttcc ttcgatttta tcaactaata gttcaaccag caggcgagct
     3661 atttcggtta atggttgctt gatagttgtc agttgagggt agtagttttc gatgaaactg
     3721 gttccatcat aaccaatcaa tttaatatct tctggaatag acagtttcat ggaacgaatg
     3781 acgttccata ccagcatagc cgttgcatcg ccagatacaa agataccatc tggtttttgc
     3841 ttttcaagaa tggctcggat ttccatctcc ttgcgcacag gtgagaaatc actggagata
     3901 tgaaaaactt cggctttgtt caaaatagat gtgaaaccta cttggcgaag gccggtaggt
     3961 gaattggaat catcgttccc cgtaatcatt aatggattgt gacatcccgc tttttgtaag
     4021 gtttgggcag ctaatacccc gccagcaaaa ttatcggaag agacaatggg aatggaagga
     4081 gagaggttgc ggtcaaaagc gataattgga gctacgacac ggtcgtagtc ttggataccg
     4141 agattgtgac tgcccgagat aatcccatct acttggttag ctgctaacat ttctagatac
     4201 tcacgttcct tatcggactc gtgctggcta ttgcaaataa tggttttata gcctcgatca
     4261 aaaagctctt tttctaaatg gctaatcaat tcagaataaa aaatattgtt tattgttggg
     4321 aagatgagac caactaattt tgcagattta ccttgtaaac tacgagctaa attattaggt
     4381 ttgtagccca gttcacgcat agcctcttcg acattgcgaa tggttttttc agataggtat
     4441 ccttttttat tgataacgcg cgagacagtt gttgggctga ccccagctaa ctgtgcgaca
     4501 tcagttagtt ttgcgaccat aatctaaatg gtagtaggtt ccggtcggat taccagtcgt
     4561 aatgactata ccagactgat ccgcatcagg gaagacacga ccagaaaata ctttgtctcc
     4621 tttattgata aagatttcaa agacagattt gtcgatgaag atattggctg tgagagctcc
     4681 tggagaaatc tcgcaagagc gacttgtacc gaaatcgagt gcgaatggct gaccacagtt
     4741 gccgcggtcc aatgtaatct ggccttgctc agtgtccaca gacaagacca agcctttttc
     4801 tgcttcattt gcgaataata cgatttcatg cttcgcgccc gctgaaaaat caagttccaa
     4861 ttcgtaaaca ttattggttt ctttttgggc tgaaaatggc tgagcttctt tacgaagact
     4921 ggtaatcgca tcgactggat attggtagag cttaccgtcc ttgatggtta attctttaac
     4981 caatgacaga cagccttggt agtcataagc atcggttggg tattccacat ctggaagtgc
     5041 caaccagcta acagatagag ttcgaccgtc tggtgcatta aaggtctgcg ttgcatagca
     5101 ctcaaaacca tagtccagat tgatcaattc gctcggttcg acaatgcttg ctgtttcagg
     5161 atcgaaactc tgaccaatct tgtacatatt tggatagata ttgccatagt ccaatacctc
     5221 tttgtccaag ccttgtggac aataaagaag gatgggttgc tcaccgacga acgcaatatt
     5281 tgggcattcc atcatataag cggtcatatc attggcaaaa tctaggtcac caacatagga
     5341 ccagttgagg tagtcgttat tttcagcctt gtagagtttg acaattccct ttttatccag
     5401 attttgtcca ccgacgatag cgtaatattg ccctttatag ttgaaaattt gtggatcacg
     5461 gaaatggtcg gtggtatctt ctggttgctc aatcaagact ttatcaatct tttcaatctt
     5521 accatcttta tccattaagg caccgatttg gtatggatgg cgaacccaat tttcatcgcg
     5581 gacatttcca gtgtagaaga ggaagagctt gtcgccaaat tccatggcag atccagagta
     5641 ggcaccgtgg ctatcaagtg gtgtatctgg gtacataacc gtaccagttt cttcaaaatg
     5701 gaccaaatcc gttgattctg tatggaccca agatttcaat ccgtgcgcag caccgaatgg
     5761 gaagtattgg taaaaaagag tccactttcc attaaaataa gaaaatccat ttggatcatt
     5821 taacagtcca tgtggtgttt caatatggaa atttgtcctc caaggagaac tctctgtatt
     5881 cttctttatt ttttcaatat attcgggtgt ccagtcagca taagccctgt aacgctcctc
     5941 tgttgtaaat gccataattt tctccaaatt ttctagtttt tcattaatat agtaaacgtt
     6001 ttcttaaaaa aaatcaagtt ttaacaatgt ttttaagaaa ttcaaaaaaa aatgtgataa
     6061 acgtttgaca tattttataa aagtgatata ataaaaccat cgaaagtttg aaaacacttt
     6121 caaaaaataa aaaatattta ataaggagat ttttgcaaga tgaataatac agaaattgca
     6181 aaaaaagtca ttgacgccct tggtggacgt gagaacgtac gcagtgttgc ccactgtgcg
     6241 actcgccttc gtgtcatggt tgttgatgaa ggaaaaatcg acaaggatac agtagaagac
     6301 atcgaaaaag tacaaggtgc tttcttcaac tctggtcaat accaaatcat ctttggtact
     6361 ggtacagtaa acaaaatcta cgatgaagtg gttgcccttg gtttaccaac agcgactact
     6421 ggtgaacaaa aagctgaagc tgctaaacaa ggtaatgctt tccaacgtgc tatccgtact
     6481 ttcggtgacg tattcgttcc aatcattcct gctatcgtag caactggtct tttcatgggt
     6541 cttcgtggtc ttcttggagc tcttggttat actcttccag aagatttgaa cgtttactca
     6601 caaatcttga cagatacagc cttcatcgta ttgccagcct tggtagtatg gtcaaccttc
     6661 cgtgtattcg gtggtaacca aacaatcggt atcgttcttg gtatgatgct tattgcgggt
     6721 cagttgccaa acgcttgggt tgtagcatca ggtggcgatg tgaaaccaac tatcttcttc
     6781 ggtttcatcc cagttgtagg tttgcaaggt tcagtattgc cagccttcat catcggtttg
     6841 atcggtgcta aatttgaaaa agctgtccgc aaggttgttc cagaagttct tgacctcttg
     6901 gtaacgccat tcgtaacctt gtttgtaatg tctattcttg gcttgtttgt cattggtcca
     6961 gtcttccacg tggttgaaaa ctacatcttg gctggtacac aagctatctt gaacttgcca
     7021 atgggtcttg gtggtctcct tatcggtggt gttcaccaag ttatcgttgt atcaggtgtt
     7081 caccatatct tcaacttctt ggaagctcaa ttggtagcaa acactggtgc taacccattc
     7141 aacgctatca tcactgcagc tatgacagca caaggtgctg ctacagtagc ggttggtgtg
     7201 aaaactaaaa atcctaaatt gaaagctctt gctttcccag cagctctttc tgccttcctc
     7261 ggtattactg agccagctat cttcggtgtt aacttgcgtt tccgcaaacc attccttctt
     7321 tcattggttg cgggtgccat cggtggtgct gtagcatctc ttcttggtct tgctggtaca
     7381 ggtatgggtg ttactatcat cccaggtttg acactttacg caggtaatgg tcaaattctt
     7441 ccatacatcc ttatggttgc tgtatcattt gctcttggtt ttgctcttac ttacctcttc
     7501 ggttatgaag atgaggagaa agaagtaaaa aagcctagtg cttcagcaca agaaacggct
     7561 gaaacgcttg aagaagcaga aacaggactt gtagctgaag aaactcttgt atctccactt
     7621 tcaggtgacg ttgttgctct tgaaaatgtt aatgacccag tcttctcatc aggagctatg
     7681 ggtaaaggtt tggctgttaa accatctgag ggtgttgttt acgctccagc agatgcagaa
     7741 gtaacaattg cttttgaaac aggccatgct tacggattga aaacagcgtc tggtgctgaa
     7801 cttttaattc acatcggtat tgatactgta tcaatgaacg gtaacggatt tgaaaaattg
     7861 gtggcagcag gtgataaagt aaaagctggt actccgattg ctaaatttga tgcagctaag
     7921 attgcagaag caggtcttga tgatacaact atgatcattg taaccaacac tgctgacttt
     7981 gcagaagtat ctccacttgc agagggaaca atcgctcacg gtgtagaatt cttgaaagta
     8041 gctaagtaat cttatataaa atcgatttgt agagcatgac tctactacat aattaacagg
     8101 aaaaaggctt tcagcctttt tcttctgttt gcttatatgt tataataaaa gtgataaaaa
     8161 ttttggagac aatcaaatga caaaattata tggtagctta gaagctggtg gtacaaagtt
     8221 tgtttgtgca gtaggcgatg agaactttca agttgttgaa aaaacgcaat ttccaacgac
     8281 aactccttat gaaacgattg agagaacggt tgaattcttc aagcgctatg aagatcgttt
     8341 ggcaggtatt gcgataggtt ctttcggtcc aattgatatt gatcaaaact cacagactta
     8401 tggttatatc acttcgacac caaaaccaca ctggtcaaat attgatttac ttggtctgat
     8461 tgctaaggaa tttaacattc cattctactt cacgacagat gtgaattcat cagcttttgg
     8521 tgaaacattg gttcgtaaag gggtaaagag cttagtttac tatacaatcg gtacaggtat
     8581 tggtgcaggt gctattcaga atggtgagtt tatcggtggc ttgggtcata ccgaagcggg
     8641 tcatacttac gttgccctac acccttacga tgtaaaacat gaatttaaag gaatgtgtcc
     8701 atttcacaat gggtgtttgg aaggcttagc tgcaggtcct tctcttgaag gtcgtacagg
     8761 tattcgtggt gaattaattg agttaaattc agacgtttgg gatgtgcagg cttactacat
     8821 tgctcaagca gcagtacagg caaccttgct ttatcgtccg caagtcattg tatttggtgg
     8881 aggagttatg gctcaagagc acatgcttaa tcgtgtacgt gagaagtttg tcggtttgat
     8941 gaatgattat ctcccaacac cagatgtcaa agaatatatc gtaacgccag ctgttgctga
     9001 aaatggttct gcaactcttg ggaactttgc tttggcaaaa caggtatcag aaaagtaaca
     9061 taaaaagtta gggactagaa ataatcccta acttttttct tattctgtaa aaatactagt
     9121 tctataatca tcggtaagtt ttagataggc atcgtgtaac aatcctttta attcagaaac
     9181 tttcgtattt tctgttgtaa aattacctgc aacaacatcg gctaggacag cttgatccat
     9241 caattcttgc aattgctcat agttggctac cgtgagctcc tgcccatcat agttgatggt
     9301 aacaggtttt aggaaagcaa gtttttggac gcgttcttgg tacatcgctt tcttgaaagt
     9361 cttataatcg ccattgtatt cagggagaat attggcaaag atgagtgaat caggaacgac
     9421 atcgctatct gcttgtttgt attggttaga catgtaaggt accatgccgt tttcatatcc
     9481 tttttcagct agaagttcaa atgctgtacg tcgaaaagaa agatcaccag gaacacgctc
     9541 ggttgttgcg gtagcccaga taggagcaaa gagacttagt ttgtgatagc cgttgttcat
     9601 cacttcttca ggattatcag ggtctcgctc aatgcgattg gcagattcac gacggacggt
     9661 cacatcatta tcaacaaggt catcaacagt ttttagttcg atgctattcc attcttcatc
     9721 tgtgaaatcg cgtttaaggt ttactccgta aggtccatac tcttccgcac ctgggatgag
     9781 tttttctttc gtttctaact tgtgaaacca ttggcgttga gtgtctttat cctgttttaa
     9841 aatagctgta ccttcagcgt attctaatgt gtagatgaga tcgaataagc cctgcatata
     9901 ttgttgtaaa tctgctgaat tttggaagcg ttcagggcta acattgtggt agcgagtgcc
     9961 agtatgacct gaataatcag atagagaatt aaaaccgatg attggatagt cgacacggtc
    10021 tggtgcttgt aacattcctt caggaaatgc ttcaagttgc ataccagctc ttcggttatg
    10081 atcgagtaag aatttatcat aatcaaaggc gtgaaccatc tcgtgcgtga gtgttacggc
    10141 gccatctgtt ccgagtaatg gggtaatgac aaagttgact tcctgtctcc aagcataagc
    10201 accggcccaa gtgagttcag gaaggaagta ggttccagaa ggaccgaaaa cctcttgaat
    10261 ggcagctgtt gtctcagcgg tagcgtcgtt ttgcattttc tcaacaaatt caggagtgag
    10321 cttgcctgta tcggaatacc aaacaccttt ccaagcgtaa gaagaggcgt cgtaggcgta
    10381 attgccgtgt cctccccata ctggctggaa gtagagtaag gtatgcttat gataatcagg
    10441 caggatacgg taccacatgt cgtaatgagc acgatacaac tcggcatctg ccaggatttg
    10501 ttcttttatt ttggagagtt cggcctgata gacttcggga ttgcttagtt ttagagattg
    10561 atcaatgtaa cgatcgtagg aactaaagat gagattcgat aggtttgaaa tgatgtaaac
    10621 attgtcctcg ctcgttgtta atagcggtag caacatattt ggataggtat cgcggatacg
    10681 aggcgtaatc acttcttcag ggatttgagg atcttttaat cgctcataga catttagtct
    10741 gctgttgtct tcatcgctaa gaacggtaga tttagtctct acgataaagg catctgtcgt
    10801 ttgtttgaac caatcgttat cagacatttc aggtaaaaag atttctcgat aggcttcaag
    10861 gaaatcagtc agtgatgcct tgtctgtgac agatgcaaag ttctctgcat aggaaaaata
    10921 acttctttgt gggctataac tctggtagtc attttgtcca aaagttatga gagcatctag
    10981 tgcatccgct tctcctccga agaaatcagt atggaacatt gttaattcct tgctattaat
    11041 ttctccgtaa tcaatatcgt accatctatc gaggtaggct aaactgagta agataatttc
    11101 tttattctct tcgatagtac gaatggtttg tgtgactgat tctggatcat ctagtttaac
    11161 agactcgtca tttattaacg ctttttttag atagtcacga atatttgtct taactttgtt
    11221 aaagggttct tctaaatata gacggtccat ttgctgctct tgattttctg taatggagag
    11281 agcagtatac atattttcag aacgaaattc aacagcttgt agacttggaa ctaccttgtc
    11341 tagaatgtca gagtagtctt gtaatgtttg gagaggtgaa taagtaactc cccaatccgc
    11401 tacttggtag taagcacgtt tatctttgtt ttctgtatat tggagcggga aaaataaggt
    11461 gctgccatct tcaaagtgag ctaggagtgt attgatgttt tcttctcgtc cctggatatc
    11521 agaaataatg gctttgtcgg ccatggggac aaggctgatc gttttactac tagccaattt
    11581 gtggtctgcg ccaatattgt tggcagcctt ttttagttgc tggttgtcgc ttgttggatc
    11641 taattttttt agattgaaga gcaaggtttc attatttata gcgctatcgg tactatcttg
    11701 ttgctgagat gatgcagttg tggaagagct ctctttattc tcggtagatt gtggacctat
    11761 atccttgtca gtgacgtagc ctacatactg atactgcttt atgttacttg gatcaggaag
    11821 ttggtctcca actttgagct gatgaacctg attgtagcct gcaagtaaat tgctttctag
    11881 agcctggatg ctctggatag gtagaataga accagtggcg gtcagaagaa ggatggatga
    11941 aataatcctt ctctttttgc cttttccggc caaacttatt cctagaacta gaagaagtcc
    12001 ccctccaatc gttaatagat tgatccctgt ctcccctgta gctggaagaa tcccaaatat
    12061 ttttttaggt tcggtcttgt agatgagata gattgtttga ttttccgtag ctgtttcttt
    12121 ggaaggtgag acagttttca gcttagataa gacagaatcc ttctctgaac ttgttagttc
    12181 atcttgtgca atatagtgat attgaacaga taccgtcgat gcatcatttg cgtaaactat
    12241 aggaggctgg cttccccata ggctgctcac tatggctact gtagtactag atatggctag
    12301 ttgtttaaga gcgattttct tggtatacat tttcctctcc tttttacata tttacttgta
    12361 caatcagatt atactacttg tatgaagaaa aaaatgccaa atcgttcaca tttttggggc
    12421 aatagtgcat atttttttaa attttaaatg gtatattttt actagagata gaggctggta
    12481 tcctggaatt tattttagta attggtgtct taatcatgtt ctttttggta atataatatt
    12541 actgtgtaga aatttttcca gatttgtttg ttttattgtg tttttatcta agaatactgt
    12601 gtatcctagt gccaaacctt gaaaattgcc taattttctg ctacaatata ttattgacta
    12661 aaattgaaat aggatgaatg atatggtaac aaatgtactt cgttctctca ttgaaaatga
    12721 taagggagag ctaagaaaac ttgagaaaat ggcagacaag gtcttctcgt atgccgatga
    12781 aatggaagcg ctgactgatg aacagttgca agctaagaca gcagaattta aggagcgcta
    12841 caataacggt gaatccctcg acgatctttt gtacgaagct tatgcggtag tccgtgaagg
    12901 agctcgtcgt gtattgggtc tctatcctta caaggttcag gttatgggag gaatcgttct
    12961 tcacaacggt gacgttccag aaatgcgtac aggtgaaggt aaaactctga ctgcaacgat
    13021 gcctgtttat ttgaatgcct tgtctggtca aggtgttcac gtagtgacgg tgaacgagta
    13081 tctttctact cgtgatgcga ctgaaatggg tgaattgtac tcatggcttg gtctatcagt
    13141 tggtatcaac ttagctgcta aatcaccctt ggaaaaacgt gaggcctata actgcgatat
    13201 tacttattcg accaactcag agattggttt tgactacctc cgagacaata tggttgttcg
    13261 cgcagaagac atggttcaac gtcctctcaa ttacgccttg gtcgatgaag ttgactcaat
    13321 cttgattgac gaagctcgta cgccgttgat tgtatctggt gcacaaggtt ctgaaacaaa
    13381 ccagttgtat ttcttggcag ataatcttgt taaatctttg acaacagaag attacatcat
    13441 tgacattcca tctaaaacga ttggtctgtc tgattcaggt attgacaaag cagagaaatt
    13501 cttcaagtta gataacctct acgatattga aaatgtagcc attacccatt tcttggataa
    13561 tgcacttcgt gccaactaca ttatgaccta tgatattgac tatctggtca atgaagacca
    13621 agaggtcatg attatcgatc cgtttacagg tcgtacgatg gaaggtcgtc gctattctga
    13681 tggacttcac caagccatcg aagctaagga aggtgtaccg gttcaaaacg agtctaagac
    13741 aagtgcctct attacctacc aaaacctttt ccgtatgtat aaaaaattat cagggatgac
    13801 gggtactggt aaaacagaag aggaagaatt ccgtgaaatc tacaacatcc gtgttgtacc
    13861 aatcccaacc aaccgcccaa tcgcgcgtgt tgaccacgaa gatttactct atccaagtct
    13921 agaatacaaa ttcaatgccg ttattgcgga tgtgaagaga cgctatgaga aagggcaacc
    13981 tgtcttggtc ggtacagttg cggttgaaac ttctgatttg atttctcaaa aattggtagc
    14041 tgcaggtgtc cctcacgaag tattgaatgc taaaaaccac tatcgtgaag cgcagattat
    14101 tatgaatgct ggtcagcgtg gtgcggtcac tattgcgacc aacatggcgg gacgcggtac
    14161 cgatattaag ttaggtccag gtgtacgtga acttgggggg ctatgtgtta ttggtactga
    14221 gcgccatgaa agtcgtcgta ttgataacca gcttcgtgga cgttcaggtc gtcaaggtga
    14281 cccaggtgaa tcacaattct atctatctct cgaagatgac ttgatgaaac gctttggttc
    14341 agaacgcatc aaagtattta tggagcgtat gaatctaaca gaagaagagt ctgttatcaa
    14401 gtctaaaatg ttgacgcgtc aagttgaatc tgctcagaag cgtgtggaag ggaacaacta
    14461 cgactcacgt aaacaagtcc ttcaatatga cgatgtgatg cgtgagcaac gtgaaatcat
    14521 ctatcgccaa cgccaggatg ttattactgc tgaccgtgat ttggctcctg aaatcaaagc
    14581 gatgatgaaa cggacgattg aacgccaagt tgcgggtcac ttccttggtt cgaaagatga
    14641 agctattgat ggaattatca aatttgcgca tgcaaatctc gttgaagatg ataccttgag
    14701 taaagctact tttgaagcaa tgaatcagaa agagattgtc gaagagctct atgaacgtgc
    14761 tttgagagtc tatgattcgc aagtgaaaaa attacgcgat gaagaacgtg tacgcgaatt
    14821 ccagaaagtt cttatccttc gtgttgtgga taacaaatgg acagaccata ttgatgcctt
    14881 ggatcaattg cgtaatgcag tcagtcttcg tggatacgct caaaacaatc caatcgttga
    14941 atatcaatca gaagcattta ctatgttcaa cgatatgatt ggggctatcg agtttgaagt
    15001 aacccgcttg atgatgaagg cgcaaattca tgacaatatt gagcgtgagc gtacaagtca
    15061 agaagcacat acgacagctg ttaagaatat tatgccgaac caatcgcatg caattcagga
    15121 gaatgtatct tttgaaggtg ttgatcgtaa cgatccatgc ccatgtcaat ctggtaagaa
    15181 atttaaaaat tgtcacggcc gtaaatagga atgacgcgtg gactggacgg ctgtccagtc
    15241 cttttgcaat ttttagacaa gtcactagag tcagtttgtt tattttaata aatgaaatga
    15301 ctatgcaaaa ggagaccgat taatgatagt aggacatggc attgaccttc aggagatgga
    15361 ggcgattgaa agtgccagaa tcaaacacca agggtttccc aaaaagattc tcacggagaa
    15421 agaatttgaa cggtatcaaa gcctatccgg tcgccgtcag ctagaatatt tagctggacg
    15481 ttggtcagcc aaagaagcgc tgaccaaggc cttggggaca ggtattggta agataggatt
    15541 tcatgatatt gaaattctga ataccagcaa aggagttccc tatgtgacga agagtccctt
    15601 tgatgggaat atttggctca gcattagcca ttcaggaaat tttgtacaag ctagtgtgat
    15661 tttggaggag aaagatgatt gaaagtgaac atcgacccac gcaaattcgg gttaacttag
    15721 atgcgattgc ggaaaatttc gagcaagtaa tgaccaactt gccccctaag actgaagcat
    15781 ttgctgttgt taaggcgaat gcttatggtc atggagctgt tgcggtagcg aaaaagttat
    15841 ccagtcaagc agctggtttt tgtgtttcga atttggatga agcattagag ttacgtaaag
    15901 caggtatcga gcatcctatc ttgattttag gagtggttcc tgtacgtttt ttaccagtag
    15961 ctcatcaact caatatcagt gtgacagttg ctagtctgga ctggttgcaa gatgcaaaag
    16021 acttagaggc tgatttatct ggtctaactg tccatcttaa gctggataca ggtatggggc
    16081 ggattggttt tagaaaaata gccgatttgc tacaagcgat tgctatcctt gaagaattag
    16141 agtatgacat cgaaggagtc tacactcatt ttgctactgc ggatgaggtt gatcaggcgc
    16201 acttcgagag tcaactgtct gtttttaaag aatttttgga tgttctacca attactccgc
    16261 gctggattca tgccagcaat tcagcaacaa gcatttggca tgctgataca gtatttaacc
    16321 tggttcgttt gggaaacatt ctttatggac ttaatccaag tggacgagta ctagaactcc
    16381 cgtttgatgt tcaaccagcc ttatctctcg tatctgaaat tgttcatgta aagcaggttg
    16441 aagctggcac aacaattggc tacggagcta cttatcacag caccgattca gaatggattg
    16501 cgaccgttcc gataggatat gcagatggtc tcgtacgaag cttacaaggc ttatcagtcc
    16561 tagttgatgg gcaggcctgt gaaattgtag ggcgtatttc gatggaccag atcaccattc
    16621 gtttacctca tgcttatccg cttggtcaaa aagtcaccct aatcggtcaa gatggagata
    16681 aaactatctc tgttcaagag tgggctgatc gcatcggaac cataaattac gaggtggttt
    16741 gtcttttgac agatcgccta cctcgaattt ttgagtaaac gtgacgataa tccgcctctt
    16801 tcactagaat agaaggctaa aatattagag aagtgttgcc tagatattgt ctataataca
    16861 aatatcgtca tttagttgac ttttattact tcgatgcaag gggagtggga aagattcgac
    16921 taggtcaaaa agagttctcc tcacttccaa gcagttggct cgggctaaaa tagtccactg
    16981 gactgttaaa cccaatcaac cactgcgctg agatgttgac actaactttg agttttcgta
    17041 taaaaagcct aaaaaatagc ttagaattgc atcgtcagaa acgttgattc taagctattt
    17101 ttgtttattc aaattttaat tgctactcaa tgaaaattaa aatcagacta gctccaatgg
    17161 agcttgacac tcatcaaatc aagtcaacaa tgtctggttt tgattttcga agagtatgaa
    17221 gagggaactg accgacctcg ttgtgattat tgctcgttaa aaaaagcttc atagagtgcg
    17281 tgcagagcgc gtttcttttc ttcggttttg acaacaaaca taacagaaac ttcactggct
    17341 ccctgtgaaa tcattgccaa gttgacattt tgtttagaga gggcagtggt agcggtagct
    17401 gttacaccga catggctctt catattttca ccaacaatca tgataataga taaaccatgt
    17461 tcgatttcgg ccttgtcaac ttccattttc gtattgagtt gacgaaggat ctcttcttcc
    17521 ttgataggag tcaattcacg ctcacggact acgatggata aatcgtcaat accggtcggc
    17581 atgtgctccc agcgaatatt gagatcttcg agaatttgca ataccttgcg accaaaacca
    17641 acttcacggt tcatcaagta tttggacaag ttaatgctga caaaaccatc gtctgcagca
    17701 ataccgacaa caggaactgt ttgctcggta tgtttgtgta caattcgggt accagggtga
    17761 gttggattat tggtgttttt gataactaat ggaatccgcc cgcgataggc aggaaggaga
    17821 gcttcatcgt ggaggacgga gaaacctgca taagctaatt ctcgcatttc acgataggtc
    17881 aattctttga ttgaatgtgg atttttaatg atgccaggat gggctgcaaa aataccatcg
    17941 acatctgtaa agttttcata gaggtcagcc ttgaccccgg cagcaatgat ggaacctgta
    18001 atgtccgatc cacctcgtga gaaggtacaa atctggttat caacagttac accgaagaat
    18061 cctggaataa tgagtacttc atctgtatca cgaagctctt cgattttgtc ataacttgaa
    18121 ggcaaaatgc gagcatttcc tggttcggag ctgacaataa taccagcttt tttaggatgg
    18181 acatagcgtg cgggcaatcc tctgtgggta aaatattcgg caatcaattt ggcattatta
    18241 tcttcaccag ctgctaagaa tgcgtcgtaa aggaattcgt tatcatcaat tggtaggctg
    18301 gccaaagaga tgatgctgtc tgcgattttc ttcatgctgt tagctgtgaa accaagttcg
    18361 tcaaccattg cctgataacg gttgatgatc cactcttgac tggcagtcac atcttttccg
    18421 ttaacatatt ttttataata tttaatcaac gcatcagtaa ctttagtatc ctcggcattg
    18481 cgttttccag gtgcagacac aacaacaaag cg
//
LOCUS       DBNFCX010000039        18498 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.039, whole genome shotgun sequence.
ACCESSION   DBNFCX010000039 DBNFCX010000000
VERSION     DBNFCX010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 18498)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18498)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18498
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.039"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(37..234)
                     /locus_tag="AC1PJC_001195"
     CDS             complement(37..234)
                     /locus_tag="AC1PJC_001195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620186.1"
                     /translation="MISENITEIENSLELVDVNDIDKKLDFIARIDFTNSWDEINEIL
                     NQKEQEQLMRISNKVNEFLSK"
     gene            289..624
                     /locus_tag="AC1PJC_001196"
     CDS             289..624
                     /locus_tag="AC1PJC_001196"
                     /inference="COORDINATES: protein motif:HMM:NF012798.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HIP6620187.1"
                     /translation="MLKEQDTIDFDNPNNLLFVNPIYGVPSNKTVNTCLSELLHQLNI
                     TPKVLTATGIRHTYISILLAEGIDIWTLSKIVGHKDTKQIIETYSHLIKEKEEEETEK
                     IRKIMSANT"
     gene            complement(797..869)
                     /locus_tag="AC1PJC_001197"
     tRNA            complement(797..869)
                     /locus_tag="AC1PJC_001197"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(834..836),aa:Asn,seq:gtt)
     gene            complement(875..946)
                     /locus_tag="AC1PJC_001198"
     tRNA            complement(875..946)
                     /locus_tag="AC1PJC_001198"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(911..913),aa:Glu,seq:ttc)
     gene            1058..1131
                     /locus_tag="AC1PJC_001199"
     tRNA            1058..1131
                     /locus_tag="AC1PJC_001199"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1092..1094,aa:Arg,seq:tct)
     gene            complement(1129..1812)
                     /locus_tag="AC1PJC_001200"
     CDS             complement(1129..1812)
                     /locus_tag="AC1PJC_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YoaK family protein"
                     /protein_id="HIP6620188.1"
                     /translation="MNQKEYRVFEGLRIACSLTFISGYLNAFTFVTQGGRFAGVQSGN
                     VISLAYFLAKGDFAQVVNFSIPILFFVFGQFFTYLARRYFEKQTWSWHFGSSVMMLVL
                     ILLTIILSPIMPASFTIASLAFVASIQVETFRRLRGAPYANVMMTGNVKNAAYLWFKG
                     LIEKDSELRKTGRNILLTIIGFMLGVIISTHLSFQFEEYALIGLILPVLYINYELWQE
                     KRPTRGRSK"
     gene            complement(1837..2316)
                     /gene="rlmH"
                     /locus_tag="AC1PJC_001201"
     CDS             complement(1837..2316)
                     /gene="rlmH"
                     /locus_tag="AC1PJC_001201"
                     /EC_number="2.1.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011680487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HIP6620189.1"
                     /translation="MKIKLITVGKLKEKYLKEGIAEYSKRLGRFAKLDMIELPDEKTP
                     DKASQAENEQILKKEADRIMSKIGERDFVIALAIEGKQFPSEEFSQKISDIAVNGYSD
                     ITFIIGGSLGLDSCIKKRANLLMSFGQLTLPHQLMKLVLIEQIYRAFMIQQGSPYHK"
     gene            2491..3687
                     /locus_tag="AC1PJC_001202"
     CDS             2491..3687
                     /locus_tag="AC1PJC_001202"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1C family serine protease"
                     /protein_id="HIP6620190.1"
                     /translation="MERIPYMKKYLKFAILFVIGFFGGLIGALSASFFQPQVQQANST
                     ITSVSNVQYNNETSTTKAVEKVQNAVVSVINYQKSANNSLGAIFGNIESSDELAVAGE
                     GSGVIYKKDGQYAYVVTNTHVINNAEKIDILLASGEKISGELVGSDTYSDIAVIKISA
                     DKVTAVAEFADSDTIKVGETAIAIGSPLGSVYANTVTQGIISSLSRTVTSQSEDGQTI
                     STNAIQTDTAINPGNSGGPLINIQGQVIGITSSKITSSSVSSSGVAVEGMGFAIPAND
                     AVAIINQLEKAGKVSRPALGVHMVNLTTLSTSQLEKAGLSNTELTSGVVIVSTQSGLP
                     ADGKLETFDVITEIDGETIQNKSDLQSALYKHQIGDTITVTYYRNNQKQTVDIKLTHS
                     TEELSE"
     gene            3748..4512
                     /locus_tag="AC1PJC_001203"
     CDS             3748..4512
                     /locus_tag="AC1PJC_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HIP6620191.1"
                     /translation="MEELRTLNISEIHPNPYQPRIHFDEKELLELAQSIKENGLIQPI
                     IVRKSSIIGYELLAGERRLRASQLAGLTTIPAVVKELTNDDLLYQAIIENLQRSNLNP
                     IEEAASYQKLISRGLTHDEVAQIMGKSRPYISNLLRLLNLSSQTKQAVEEGQISQGHA
                     RQLVSFSEEKQAEWVQLILSKDLSVRTLEKLIAANKKKHTKLKQRDQFLKEQEDSLSK
                     TLGTATKIIKKKNGSGEIRISFNDLDEFERIINNFK"
     gene            4715..6088
                     /gene="dnaA"
                     /locus_tag="AC1PJC_001204"
     CDS             4715..6088
                     /gene="dnaA"
                     /locus_tag="AC1PJC_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HIP6620192.1"
                     /translation="MNQEQLFWQRFIELAKVNFKPSIYDFYVADAKLLGINQQVANIF
                     LNRPFKKDFWEKNFEELMIAASFEIYGEPLAIQYQFTEDEQEIKNTTNARSSVVHQVQ
                     TSESATPQETFKPVHSDIKSQYTFANFVQGDNNHWAKAAALAVSDNLGELYNPLFIFG
                     GPGLGKTHILNAIGNKVLADNPQARIKYVSSETFINEFLEHLRLNDMESFKKTYRNLD
                     LLLIDDIQSLRNKATTQEEFFHTFNALHEKNKQIVLTSDRNPDHLDNLEERLVTRFKW
                     GLTSEITPPDFETRIAILRNKCENLPYNFTNETLSYLAGQFDSNVRDLEGALKDIHLI
                     ATMRQLSEISVEVAAEAIRSRKQTNPQNMVIPIEKIQTEVGNFYGVSLKELKGSKRVQ
                     HIVHARQVAMFLAREMTDNSLPKIGKEFGNRDHTTVMHAYNKIKTLLLDDENLEIEIT
                     SIKNKLR"
     gene            6242..7378
                     /gene="dnaN"
                     /locus_tag="AC1PJC_001205"
     CDS             6242..7378
                     /gene="dnaN"
                     /locus_tag="AC1PJC_001205"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000581170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HIP6620193.1"
                     /translation="MIQFSINKNIFLQALSITKRAISTKNAIPILSTVKITVTSEGIT
                     LTGSNGQISIEHFISIQDENAGLLISSPGSILLEAGFFINVVSSMPDLVLDFNEIEQK
                     QIVLTSGKSEITLKGKEAEQYPRLQEVPTSKPLVLETKVLKQTINETAFAASTQESRP
                     ILTGVHFVLTENKNLKTVATDSHRMSQRKLVLDTSGDDFNVVIPSRSLREFTAVFTDD
                     IETVEVFFSNNQILFRSEHISFYTRLLEGTYPDTDRLIPTEFKTTAIFDTANLRHSME
                     RARLLSNATQNGTVKLEIANNVVSAHVNSPEVGRVNEELDTVEVSGEDLVISFNPTYL
                     IEALKATTSEQVKISFISSVRPFTLIPNNEGEDFIQLVTPVRTN"
     gene            7470..8351
                     /locus_tag="AC1PJC_001206"
     CDS             7470..8351
                     /locus_tag="AC1PJC_001206"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001727 - lipid kinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol/lipid kinase family protein"
                     /protein_id="HIP6620194.1"
                     /translation="MTLYILANPNAGSHTAEHIIFKIKESYPQLAVNIFMTVGPEDEK
                     RQIEAILKEFVSSEDQLMILGGDGTLSKALRFWPASLPFAYYPTGSGNDFAKAMNITS
                     LYRSVDTILERKTSRIYVLNSSYGTVVNSMDFGFAAQVINGSTNSILKKILNKVKLGK
                     LTYLFFGIKTLFSKQAINLELTLDEKSYQLDNLFFISVANSLYFGGGIMIWPTASAKK
                     KEVDIVYFKNGNFYQRLQSLLALLTKRHESSHTIQHLTGVDVVLKSKEKLLLQIDGET
                     CTANEVTLTYQERSMYL"
     gene            8361..8564
                     /locus_tag="AC1PJC_001207"
     CDS             8361..8564
                     /locus_tag="AC1PJC_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF951 domain-containing protein"
                     /protein_id="HIP6620195.1"
                     /translation="MYQLGSFVEMKKPHACVIKSTGKKANKWEVIRLGADIKIRCSNC
                     DHVVMMSRHDFERKMQQVLPSEA"
     gene            8668..9027
                     /locus_tag="AC1PJC_001208"
     CDS             8668..9027
                     /locus_tag="AC1PJC_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIP6620196.1"
                     /translation="MNQLAQQIRVLRTAKNLSQDELAEKLYISRQAVSKWENGEATPD
                     IDKLVQLAEIFGVSLDYLVLGKEPEKEIVVEQRGKMNVWEYLNEESKRPLTRGDVVVL
                     IFLAVMLLGGLFIQHYF"
     gene            9114..10229
                     /gene="ychF"
                     /locus_tag="AC1PJC_001209"
     CDS             9114..10229
                     /gene="ychF"
                     /locus_tag="AC1PJC_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002269933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HIP6620197.1"
                     /translation="MALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMV
                     EVPDERLQKLTELITPKKTVPTTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVH
                     VVRAFDDENVMREQGREDAFVDPIADIDTINLELILADLESINKRYARVEKMARTQKD
                     KDSVAEFAVLEKIKPVLEDGKSARTVDFTDEEQKIVKQLFLLTTKPVLYVANVDEDKV
                     ADPESISYVQQIRDFAATENAEVVVISARAEEEISELDDEDKGEFLEALGLTESGVDK
                     LTRAAYHLLGLGTYFTAGEKEVRAWTFKRGMKAPQCAGIIHSDFEKGFIRAVTMSYDD
                     LMTYGSEKAVKEAGRLREEGKEYVVQDGDIMEFRFNV"
     gene            10387..10956
                     /gene="pth"
                     /locus_tag="AC1PJC_001210"
     CDS             10387..10956
                     /gene="pth"
                     /locus_tag="AC1PJC_001210"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000163933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - peptidyl-tRNA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HIP6620198.1"
                     /translation="MTRLIIGLGNPGDRYFETKHNVGFMLLDKIAKRENVTFSHDKIF
                     QADIATTFIDGEKIYLVKPTTFMNESGKAVHALMTYYGLDATDILVAYDDLDMAVGKI
                     RFRQKGSAGGHNGIKSIVKHIGTQEFDRIKIGIGRPKGKMSVVNHVLSGFDIEDRIEI
                     DLALDKLDKAVNVYLEEDDFDTVMRKFNG"
     gene            10956..14450
                     /gene="mfd"
                     /locus_tag="AC1PJC_001211"
     CDS             10956..14450
                     /gene="mfd"
                     /locus_tag="AC1PJC_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HIP6620199.1"
                     /translation="MNILDLLHKNKQINQWQSGLNKSTRQLLLGLTGTSKSLVMATAY
                     DCLAEKIMIVTATQNDAEKLVADLTAIIGSENVYNFFTDDSPIAEFVFASKERTQSRI
                     DSLNFLTDSTSSGILVASMAACRVLLPSPETYKGSKIKLEVGQEIEVDKLVNNLVNIG
                     YKKVSRVLTQGEFSQRGDILDIFDMQAEAPYRIEFFGDEIDGIRIFDVDSQKSLENLD
                     EISISPASDIILSSEDYSRASKYIQTAIEQSTLGEQQSYLREVLADMQTEYRHPDLRK
                     FLSCIYEQSWTLLDYLPKSSPLFLDDFHKIADKQAQFEKEIADLLTDDLQKGKTVSSL
                     KYFASTYAELRKYKPATFFSSFQKGLGNVKFDALYQFTQHPMQEFFHQIPLLKDELTR
                     YAKSNNTVVIQASSDVSLQTLQKTLQEYDIHLPVHAADKLVEGQQQVTIGQLVSGFHL
                     MDEKLVFITEKEIFNKKMKRKTRRTNISNAERIKDYSELAVGDYVVHHVHGIGQYLGI
                     ETIEISGIHRDYLTVQYQNSDRISIPVEQIDLLSKYLASDGKAPKVNKLNDGRFQRTK
                     QKVQKQVEDIADDLIKLYAERSQLKGFAFSPDDENQIEFDNYFTHVETDDQLRSIDEI
                     KQDMEKDSPMDRLLVGDVGFGKTEVAMRAAFKAVNDGKQVAILVPTTVLAQQHYANFQ
                     ERFAEFPVNVDVMSRFKTKAEQEKTLEKLKKGQVDILIGTHRLLSKDVVFADLGLLVI
                     DEEQRFGVKHKERLKELKKKIDVLTLTATPIPRTLQMSMLGIRDLSVIETPPTNRYPV
                     QTYVMETNPSVIRDAVLREIDRGGQVYYLYNKVDTIEQKVSELKELVPEATIGYVHGQ
                     MSEIQLENTLYSFVEGEYDILVTTTIIETGVDIPNANTLFIENADHMGLSTLYQLRGR
                     VGRSSRIAYAYLMYRPDKSLTEVAEKRLEAIKGFTELGSGFKIAMQDLSIRGAGNILG
                     AAQSGFIDSVGYEMYSQLLEQAILEKQGKATQRQKSNSEVNLQIDAYLPSDYIADQRQ
                     KIEIYKRIKNIDSRVNYQELQEELIDRFGEYPDVVAYLLEIGLLKSFLDQVFCHTVLR
                     RQHQVTVTFEPMAGQIFLTQDYFEALSVTNLKAQITENKGKLAVVFNIQQKKEYEILE
                     ELISFAEKLKEIKARKAE"
     gene            14500..14772
                     /locus_tag="AC1PJC_001212"
     CDS             14500..14772
                     /locus_tag="AC1PJC_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HIP6620200.1"
                     /translation="MRLDKYLKVSRIIKRRTVAKEVADKGRIKVNGILAKSSTDLKVN
                     DQVEIQFGNKLLTVKVLEMKDSTKKEDALKMYEIISEKRIEKDEEI"
     gene            14759..15127
                     /locus_tag="AC1PJC_001213"
     CDS             14759..15127
                     /locus_tag="AC1PJC_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsB family cell division protein"
                     /protein_id="HIP6620201.1"
                     /translation="MKKSKILQLNNAFIQSERKKTQHQLAERQQKNRFMGAILILVIF
                     LFMLPAYNLVGTYTNIQQQEKKLAELEKNYEELTKEQKQEAEMVAKLKNEEYAAKYVR
                     AKYQYSKEGEFVYNIPGLPK"
     gene            15124..15237
                     /locus_tag="AC1PJC_001214"
     CDS             15124..15237
                     /locus_tag="AC1PJC_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SP_0009 family protein"
                     /protein_id="HIP6620202.1"
                     /translation="MTESIFKIVEQFLQHSDEKLEELNQKNRELKLEENES"
     gene            15250..16530
                     /locus_tag="AC1PJC_001215"
     CDS             15250..16530
                     /locus_tag="AC1PJC_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HIP6620203.1"
                     /translation="MQKKLLVWLLPVLFGWQVVDSTEIPFELTAQEEYELTHTIYDQY
                     FQTIPQNPNVFQTENLYSDEELTIAGGQLQPNQHFSITDVLVNSKKELVFQIDDKGYI
                     LASRHLLFDDVIVTETTVEQTYWTKKGFTLLTSPIANEATEIKNDLQPYQAVMVSKIV
                     TTSLGDFAYVTDKGWIAVNNLSKTDNRVEAVQELLTNKYSKDTIGIYVKQLSTGQTAG
                     VNQEKLFYSASIAKLPIIYYVQEQLNAGYIDLTTKVKYTAESISFPGAYVAGGSGSLS
                     KKPDNKDYSVEELINKTAKESDNVASNLLSYYVANKFDSNFYQVITAKTGSEWSMVTR
                     ETSAEIAGKMMEALYIQNGYVLESLLSTQFDNQRISKDISVPVAHKIGDADDVKHDVA
                     IVYAGSPFVLSIFTDKSNYDEITQIANDIYGILK"
     gene            16531..17799
                     /gene="tilS"
                     /locus_tag="AC1PJC_001216"
     CDS             16531..17799
                     /gene="tilS"
                     /locus_tag="AC1PJC_001216"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HIP6620204.1"
                     /translation="MKDRFLKVTLDGHFFDKHKKVLVAVSGGLDSMNLFHLLYEYKQV
                     LGIELGIAHINHGQREESVIEEKYLRQLAEESNVPFYLSYFEGVFSEEAARKWRYGFF
                     ATIMEKEGYTALVTAHHADDQAETVFMRLIRGGRLRHLSAIQPTQPFATGELIRPLLS
                     FKKADFEKLFHFEDCSNADFKYFRNRVRNDYLPKLKQENPKIELTLNNLAVDTNNLFQ
                     ALRDLTQDLSVTDVMSFQQQTPAVQSYLLEEYFEKFPDLQLSRPQFNEVLHILRSKAN
                     HYHLLKNDYMLEKDYHRFQIYKIGPETDSQPEKIMIKSDGIFSYGSYIFSFNHPLEEA
                     DSILYFPTENPIVVRRRQAGDTILINGVNKKLRRWFIDNKISQKVRQNALIIEQNGEI
                     YGITNLVSSDLSKSVKNDIIKATLYIKMKE"
     gene            17807..18349
                     /gene="hpt"
                     /locus_tag="AC1PJC_001217"
     CDS             17807..18349
                     /gene="hpt"
                     /locus_tag="AC1PJC_001217"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006166 - purine ribonucleoside salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HIP6620205.1"
                     /translation="MLDKDIKKILVSEEEIVAKCKELGQILATDYADKNPILVGILKG
                     SIPFMAELMKHIDAHVETDYMVVSSYHGGTESSGTVKIIKDLDNSVAGRHIIFVEDII
                     DTGRTLKELKELFALRQAASIKIATLLDKPEGRVVEIEPDYTCFTIPNEFVVGFGLDY
                     DENYRNLPYVGVLKEEVYTK"
BASE COUNT         6266 a         3189 c         3505 g         5538 t
ORIGIN      
        1 acgcaactta tatgacggtt gtgcaccatg attattttat ttactcaaaa attcattaac
       61 cttatttgat attctcatta gttgttcttg ttctttttga tttagaattt catttatttc
      121 atcccacgaa tttgtaaaat caatccgagc aataaaatcc aattttttat caatatcatt
      181 cacatcaact aactctaaag aattttcaat ttcagtaata ttttcagata tcaatgtaaa
      241 taatttttca tttgaaagaa caggataaaa ctttaaaggc ttgataaatt gctaaaagag
      301 caagatacaa ttgatttcga taatccaaat aatcttctat ttgttaatcc aatttatggt
      361 gtaccttcaa ataaaactgt caatacttgt ctaagtgaac tacttcatca attaaatata
      421 actccaaaag tcctaacagc tactggtatt cgtcatacct atatcagtat tttactggct
      481 gaaggaatcg atatttggac actttcgaaa atcgtaggtc acaaagatac aaagcaaatt
      541 atagaaactt actctcatct tattaaggaa aaagaggaag aagaaactga aaaaattaga
      601 aaaatcatgt cagcaaacac ttgaccattt tttgaccaaa ttttcctatt gtatgattat
      661 tcatgtcgct ttttcaccat tttttcattc ttatccaata tgcggtaaaa actgagatag
      721 ttctaaattc attgaccaac ttttgaccaa aacaagaaaa aaccttgatt tctcaaggtt
      781 tcctatgctt tatttactcc gccaacaggg ctcgaacctg tgacatcatg attaacagtc
      841 atgcgctcta ccaactgagc tatggcggaa gaaatagtcc gtacgggatt cgaacccgtg
      901 ttaccgccgt gaaaaggcgg tgtcttaacc ccttgaccaa cggaccattt ttagaacaat
      961 aactagtata atacatgtga ctttgtttgt caatacattt tttgattttt tattgtattg
     1021 acagagtgct ttgtttaatg taaaataaaa tggttaaggt tccatagctc agctggatag
     1081 agcattcgcc ttctaagcga acggtcgcag gttcgaatcc tgctggaatc atttagacct
     1141 acctcgagta ggtctttttt cttgccataa ttcataatta atatataaaa ctggcaaaat
     1201 cagaccaata agggcatatt cttcaaattg gaaggatagg tgagtagata tgatgacacc
     1261 tagcataaac cctataatgg tcaataagat gttcctacct gtttttctaa gttctgaatc
     1321 tttttcaata agtcctttaa accagagata agcagcattt ttgacattcc ctgtcatcat
     1381 cacattggca tacggagcac ctcgtaacct tctaaatgtt tctacttgaa tagaggctac
     1441 gaaggctaga ctagcaattg taaaagacgc aggcataata ggtgagagaa tgatagttag
     1501 taaaataaga actaacatca ttacactact accaaagtgc caagaccatg tttgtttttc
     1561 aaaatacctt cttgctaagt aggtaaaaaa ttgtccgaat acaaaaaata aaatgggaat
     1621 ggaaaaatta actacctgcg caaaatcacc tttagctaaa aaataagcta gggaaataac
     1681 atttccagat tgtacgccag caaagcgacc accctgagtc acaaaagtaa aggcatttaa
     1741 ataaccactg ataaacgtta atgaacaagc aattctcaat ccctcaaaaa cacgatactc
     1801 tttttgattc attttcactc cttgtttcac gtgaaactac ttatgatatg ggcttccctg
     1861 ctgaatcata aatgcacgat aaatctgctc gatgagaact aatttcatta gttgatgggg
     1921 aagtgtcaac tgtccaaaac tcatcaacaa attagctctt tttttaatac aagaatcgag
     1981 acccagacta ccaccgatga taaaagttat atctgaatac ccatttactg caatgtcaga
     2041 tatcttttga ctaaattctt ccgatggaaa ttgtttcccc tctatcgcta aggcaatgac
     2101 aaaatctcgc tctccaattt tagacataat tctatcggct tcttttttta atatttgttc
     2161 attctctgcc tgactggctt tatctggtgt tttttcatca ggaagctcaa tcatatccaa
     2221 cttagcaaat cgtcccaatc gtttactata ttctgcaata ccttctttga ggtacttttc
     2281 tttcaatttt ccaacggtaa tcaattttat tttcataaaa taattgtaac atatccacaa
     2341 gcatacgaca gaaaatattt ttagaaaatc aggatatggc tacagttttt tcacataatt
     2401 cacagagtta tccacaggtt gtggattgat ttttgaaaac tttaagctat aattaagaaa
     2461 gcaagagtaa tcttaaggaa aattaaagaa atggaaagga ttccttatat gaaaaaatat
     2521 ttgaaatttg cgattctatt tgtaattgga ttttttggtg gtcttatcgg ggccttatca
     2581 gcctctttct tccaaccaca ggttcaacaa gcaaattcta ctatcactag tgtcagcaat
     2641 gttcaataca ataatgaaac ttccaccaca aaagctgtag agaaagtaca aaatgctgtt
     2701 gtgtctgtta ttaattacca aaaatcagcc aacaatagtc ttggtgctat ctttggaaat
     2761 attgaatcat ctgacgaact agctgttgct ggagaggggt ctggggttat ctataaaaaa
     2821 gatggtcaat atgcctatgt tgtgacaaat acgcatgtta ttaataacgc agaaaagatt
     2881 gatattcttt tagcatctgg agaaaaaatc agcggtgaac tcgttggttc cgatacctat
     2941 tctgatatag ctgttataaa aatatcagca gataaagtca ctgctgttgc tgaatttgct
     3001 gattccgata caattaaagt tggagaaact gctatcgcaa ttggtagtcc tctaggtagc
     3061 gtctacgcta atacagttac tcaaggtatt atttctagcc taagtcggac agttacttca
     3121 caatcagaag atggtcaaac aatctcaacc aacgctattc aaaccgatac agctatcaac
     3181 cctggaaact ctggaggacc attgattaat atccaaggac aagttattgg tatcacctct
     3241 agcaaaatca cctcaagttc tgtaagtagc tcaggtgtgg ctgtggaagg gatgggattt
     3301 gctattcctg caaatgatgc cgtagctatt atcaatcaac ttgagaaagc tggaaaagtt
     3361 agccgacctg ctcttggagt tcatatggtt aacttgacga ccttgtcaac tagtcaatta
     3421 gaaaaggctg ggttatcaaa tacggaatta acatccggtg tcgtaattgt ctctacacaa
     3481 agtggactac ctgcagatgg aaaattagaa acttttgatg tcattactga gattgacgga
     3541 gaaactattc aaaataagag tgatctccaa agcgctctct acaaacatca gattggagac
     3601 acaatcactg taacttatta ccgcaataat cagaaacaaa ctgttgacat taagttgaca
     3661 cattctacag aagaacttag tgaataattg acaaatgaga ctttacacaa ttgtaaagtc
     3721 tcgttttttt tgctagaata aggatatatg gaagaattac gtacactaaa tatttcagaa
     3781 atccatccca atccctatca gccaagaatt cattttgatg aaaaggagct acttgagctc
     3841 gctcaatcca ttaaggaaaa tggcttaatt caaccgatta ttgtaagaaa atcttctatt
     3901 atcggatacg aattattagc tggagaaaga aggttgcgag ccagtcaatt agctggactg
     3961 actacaatac cagcagtggt aaaggaacta actaatgatg atttactcta tcaggctatc
     4021 atagagaatc tgcagcgttc taacttaaat ccgatagaag aagcagcctc ttatcaaaaa
     4081 ttgattagta gagggttaac gcatgatgaa gttgctcaaa tcatgggaaa atcaagacca
     4141 tatatcagta atttattgcg cctattaaat ctatcatctc agactaaaca agctgtagaa
     4201 gaaggacaaa tttcacaagg gcacgcgcga caattggtgt cattttcaga agaaaagcaa
     4261 gccgaatggg ttcaactcat tttatcaaag gatttaagtg tgcgtacgct tgaaaaatta
     4321 atagctgcaa ataagaaaaa acacactaag cttaaacaac gcgaccaatt tttaaaagaa
     4381 caggaagatt cactcagtaa aactcttgga acagctacaa aaattatcaa gaagaaaaac
     4441 gggagcggag aaattcggat tagctttaat gacctcgatg aattcgaaag aattatcaac
     4501 aattttaaat agacttgttt acaatttatt tttataaaca ctcttttcca cactaaaatc
     4561 attacaaaaa gtcaggacca gcaaaggttc tggcttttat tcacatcttg tggaaaactt
     4621 ttcttaacag tgtggatttt taaaattatc tgtggaaaac ttttgttttt tatggtacac
     4681 tattctaacg aatataatgt gaaaggggga aaatatgaac caagaacaac ttttttggca
     4741 acgatttatt gaattggcaa aggtaaattt taagccatct atttatgatt tttatgtcgc
     4801 tgatgcaaaa ttactcggaa tcaaccagca agttgccaat attttcttaa atcgtccatt
     4861 taaaaaagat ttctgggaaa aaaacttcga agagttaatg attgccgcta gttttgaaat
     4921 ctacggagag cctcttgcca tccaatatca atttacagag gatgaacagg agattaagaa
     4981 cactacaaac gcaagaagtt cagtggttca ccaggtacag acatctgagt cggctactcc
     5041 tcaagaaact tttaaaccgg ttcattctga tataaaatcc cagtacacct ttgctaattt
     5101 tgtacaagga gacaataatc attgggcaaa ggctgcagct ttagctgtat ctgataacct
     5161 aggtgagctc tacaatccat tattcatttt tggtggtcct ggtcttggaa aaactcatat
     5221 tttaaatgcg attggaaata aggttctggc cgataatccc caggcaagga taaaatatgt
     5281 ctcatcggaa acattcatca atgaattttt agaacacctc cgtctcaatg atatggaaag
     5341 tttcaaaaaa acctatcgta atctggactt acttctaatt gatgacattc agtctctccg
     5401 taataaagca acaacacagg aagaattttt ccatactttt aatgcgcttc atgaaaaaaa
     5461 taagcagatt gtactcacaa gcgaccgtaa tcccgatcac ttagacaatt tggaagaaag
     5521 actagtaaca cgtttcaaat gggggttaac cagtgaaatc actccacctg attttgaaac
     5581 acgtatcgca attttacgta acaagtgcga gaatctgcct tacaacttta caaatgagac
     5641 gctatcctat ctagctgggc aatttgattc gaacgtacgt gaccttgaag gtgccttaaa
     5701 agatatccat ttaatagcca ctatgcgtca actgtctgag ataagtgtcg aggttgctgc
     5761 tgaggctatt cgatcaagaa aacaaacaaa tccacaaaat atggttattc ctattgagaa
     5821 aatccaaacc gaagtgggaa atttctacgg tgtcagcttg aaagaattaa agggttctaa
     5881 gcgtgttcaa catatcgttc acgcgcgaca agttgctatg tttttagcac gtgaaatgac
     5941 agacaattcc cttccaaaaa ttggaaaaga atttggtaat cgagaccata caaccgttat
     6001 gcatgcatac aataaaataa aaactctcct cttggatgat gagaatttag aaatagagat
     6061 taccagtata aaaaataaac ttcgttaacc tgtgtataac ttttcaaaaa agctctgttt
     6121 tttccacaag ttgtgaacaa gttaatttcc gcagttttat tggtctttca tcacttttcc
     6181 acagaataca cagagactac tattactatt aaccttatag ataataaata aaggagaatc
     6241 catgattcaa ttttctatta ataaaaatat atttctacaa gcacttagta ttactaaacg
     6301 ggcaatcagt acaaaaaatg ctattccaat tctttcaaca gtaaaaatta cagtaactag
     6361 tgaaggaatc actttaactg gttcaaatgg acaaatctcg attgaacatt ttatttctat
     6421 tcaagatgaa aatgcaggac ttttgatcag ttctccaggt tccattctct tagaagctgg
     6481 tttctttatt aatgtcgtat ccagtatgcc ggatttggtc cttgacttca atgaaattga
     6541 acaaaagcaa atcgttttga caagtggtaa gtctgaaatc acattaaagg gaaaagaagc
     6601 agaacagtat cctcgtttac aggaagttcc aacttcaaaa ccattggtgt tagaaaccaa
     6661 agtattaaaa caaacaatta atgaaacagc atttgcagct tctacacaag aaagtcgtcc
     6721 tattctgacg ggtgttcatt ttgttttaac agaaaataaa aatctaaaaa ctgttgcaac
     6781 agattcacac cgtatgagcc aacggaaatt ggtccttgat acctctggtg atgattttaa
     6841 tgttgtcatt ccaagtcgtt ctctccgtga atttactgca gtttttacag atgatattga
     6901 aacagtagaa gtcttctttt caaataatca aatccttttt agaagcgagc atattagctt
     6961 ctatacacgc ttattagaag gtacctaccc tgatacagac cgcttaattc caactgagtt
     7021 taaaacaact gcaatttttg atactgcaaa tcttcgtcac tcgatggagc gtgctcgtct
     7081 tctttcaaat gcaacccaaa atggtacagt aaaactagaa attgctaata atgttgtatc
     7141 ggctcatgta aattctccag aagttggacg tgtgaatgag gaattagata ctgtagaagt
     7201 atcaggtgaa gatttagtaa tcagctttaa cccaacttac ttgatagaag cattgaaagc
     7261 cacaactagt gaacaagtga aaattagctt tatctcttct gtccgtccat ttacattgat
     7321 tccaaataat gaaggggaag attttattca attggttaca ccagttcgta ccaactaaat
     7381 aatattaaga acggctaaac tagccgtttt tatgttatac taaaaaatag cacctagctt
     7441 atttttatat atttagtgat ggggaataaa tgacgttata tatattagct aatcctaatg
     7501 ctggtagcca tactgctgaa catatcatat tcaaaataaa agaaagttat ccacagcttg
     7561 cagttaacat ttttatgaca gttggtcctg aggatgaaaa aaggcaaata gaggctattt
     7621 taaaggagtt tgtcagtagt gaggaccaat taatgatttt aggtggagac ggcacactgt
     7681 ctaaagcttt gcgtttttgg ccagctagtc taccgtttgc ttattatcca acaggatctg
     7741 gaaatgattt tgctaaggca atgaatataa catcgctata tagaagtgta gataccattt
     7801 tagagagaaa aacaagtcgg atatatgttt taaacagttc atatggaacg gttgtaaaca
     7861 gtatggattt tggctttgca gctcaagtta tcaatggttc aacgaattca attttgaaaa
     7921 aaattctgaa caaggtaaaa cttgggaagt taacttatct attctttggt attaaaacat
     7981 tattttcaaa acaagctata aacttagaat taactcttga tgaaaaatct tatcagttag
     8041 ataatctctt ttttatttct gtagcaaata gtctttattt tggtggagga atcatgatat
     8101 ggccaacagc aagtgctaaa aagaaggaag tagatattgt ttacttcaaa aatggaaatt
     8161 tctaccaacg tctacaatca ttgttagcct tattaacgaa gaggcatgaa tcttctcaca
     8221 caattcagca tttaacaggg gtagatgtag ttttaaaatc aaaagaaaaa ttattattgc
     8281 aaatagatgg agagacatgc actgcaaatg aggtaacgtt aacctatcag gaaagaagta
     8341 tgtatcttta aggaggaagt atgtatcaat taggatcatt tgtcgaaatg aaaaaacctc
     8401 atgcctgtgt catcaaatcg accggcaaga aggccaataa gtgggaggtt atccgtctag
     8461 gagcggatat taaaatccgc tgtagcaact gtgaccatgt cgttatgatg agccggcatg
     8521 attttgaacg aaaaatgcaa caagtgctgc ctagtgaagc ctagttgaca gtttgcaact
     8581 gctggttgcg attttttcct aaaaattgct agtcaactgt tcttttctac actataatag
     8641 acttagaaaa aagaggagga aatgatcatg aatcagttag cacagcaaat tcgagtttta
     8701 cgcacagcca agaacctatc ccaagatgag ttggcagaga aactctatat ttcccgtcag
     8761 gctgtttcca agtgggaaaa tggcgaagca acgccagata ttgacaaact ggttcagctg
     8821 gcagaaatct ttggtgtcag tctggattat ctggttttag gaaaagaacc tgagaaggaa
     8881 attgtggtgg aacaacgagg aaaaatgaat gtttgggaat acttgaacga agaatccaaa
     8941 cgacctctta caagaggaga tgttgtcgtt cttatttttc ttgcagttat gcttttaggt
     9001 ggattattta ttcagcatta tttttaatga agcttgccaa acagcaagct ttttctctac
     9061 ttttctgcta taatagtcat gattgaattt ttaattggag agtaaaaaaa aacatggctt
     9121 taacagcagg aatcgtcggt ttgccaaacg ttggtaaatc aaccctattt aacgcaatta
     9181 ccaaggcagg agcagaggca gccaactacc ctttcgcaac cattgatcca aacgttggta
     9241 tggtggaagt gccagatgag cgtttgcaga agttgacaga actcatcacc cctaaaaaga
     9301 cagttccaac gaccttcgaa tttaccgata ttgccggtat cgtaaaaggt gcttctaaag
     9361 gtgagggact tggaaataaa ttcttggcca atatccgcga agttgatgcg attgtccacg
     9421 ttgtgcgtgc ctttgacgat gaaaatgtca tgcgtgaaca aggccgtgaa gatgcctttg
     9481 ttgatcctat cgcagatatt gataccatta acctagaatt gattttggcg gacctagaga
     9541 gcatcaacaa gcgttatgcg cgtgtagaaa aaatggcacg tacgcaaaaa gacaaggatt
     9601 ctgtcgcaga atttgcagtt cttgaaaaaa tcaagcctgt cttggaagat ggaaaatctg
     9661 cccgtacagt tgacttcaca gatgaagaac aaaaaatcgt taagcaactc ttcctcttga
     9721 ccactaaacc agtcctctat gttgccaacg tcgatgaaga caaggtagca gatcctgagt
     9781 ctatcagtta tgttcagcaa atccgtgact ttgcggcaac agaaaatgca gaagtggtgg
     9841 tgatttctgc gcgtgctgaa gaagaaattt cagaactcga cgatgaagac aagggtgagt
     9901 ttttggaagc tctcggttta acagaatctg gtgtggacaa gttgacccgt gcagcctacc
     9961 acttacttgg acttggtacc tactttacag caggggaaaa agaagtgcgt gcttggacct
    10021 tcaagcgtgg catgaaagct cctcagtgtg ctggtattat ccactcagac ttcgaaaaag
    10081 gctttatccg tgccgttacc atgtcatacg atgatttaat gacctacggc tctgagaagg
    10141 ctgttaaaga agctggacgc cttcgtgaag aaggaaaaga gtatgtggtt caagatggag
    10201 acatcatgga gttccgcttt aacgtttgat gcctaaactg tccttattct tcgttgtttt
    10261 accttgccat accatcagta ttgtctgcgg tttcaacgcc tagactaaga acagtttatc
    10321 gcatcaaaga ggatgattac ttggttggaa agtattttcc agccttttgg tatttaagga
    10381 gaaaaaatga cacgattgat catcggtctg ggaaatcccg gagaccgcta ttttgaaacc
    10441 aagcacaatg tcggctttat gctgctggat aagattgcca agcgtgaaaa tgtaactttt
    10501 agtcacgata aaattttcca agcggacatt gctactacct ttattgacgg agaaaaaatt
    10561 tacctggtca aaccaacgac cttcatgaat gaatcaggta aggctgtcca tgccttaatg
    10621 acttattatg gtctagatgc aactgatatt ttggtggctt atgatgattt ggatatggct
    10681 gttggaaaaa tccgtttccg tcaaaaagga tcagctggtg gccacaatgg tatcaaatcc
    10741 attgtcaagc atattggaac acaggaattt gaccgtatca agattggtat tgggcgtcct
    10801 aaaggaaaaa tgagcgttgt aaaccatgtc ttgtctggtt ttgatataga ggaccgtatc
    10861 gaaatcgact tagcactaga taaacttgac aaggctgtca acgtatatct cgaagaagat
    10921 gattttgata cagtaatgag aaagtttaat ggataatgaa tatactcgat ttacttcaca
    10981 agaataagca aatcaatcag tggcagtctg gcttaaacaa gtcaactcgc caactattat
    11041 taggactcac tggaaccagt aagtcattag tcatggcgac tgcctatgat tgtttggccg
    11101 aaaagattat gattgtgact gctactcaaa atgatgctga gaaattagtt gcagatttaa
    11161 cagccattat tggaagtgag aatgtttaca acttttttac agatgatagt cctattgccg
    11221 agtttgtttt tgcatcaaaa gaacggactc aatcaaggat tgacagttta aatttcttga
    11281 cagattctac cagttcagga attttagttg ctagtatggc tgcttgtcgg gtcttattgc
    11341 cgagtcctga gacttataaa ggttctaaaa taaagcttga agttggtcaa gaaatagaag
    11401 ttgacaaact tgtaaataat cttgtcaaca tcggctacaa aaaagtgtct cgtgtattaa
    11461 cccagggaga atttagccaa cgaggtgata ttctagatat ttttgacatg caagcagaag
    11521 ctccttatcg aatagaattt tttggagatg agattgatgg cattcgtatt ttcgatgttg
    11581 acagtcaaaa atccttagaa aatctagacg aaatctcgat ttctccagct tccgatatca
    11641 ttttgtcttc ggaagactat agtagagcta gcaaatacat tcagacagct attgaacaat
    11701 cgaccctagg ggagcaacag tcttacttac gagaagtctt agctgatatg cagacggagt
    11761 accggcatcc agatttgcgt aaattcttgt cctgtatcta tgaacaatca tggacattgt
    11821 tggattactt gccaaagagt tctcccttat ttttggatga ttttcataaa atcgctgata
    11881 agcaggctca atttgaaaaa gaaattgcag acttgttgac agatgattta cagaagggta
    11941 aaacagtgtc aagtttgaaa tattttgcct caacttatgc tgaattgaga aaatacaaac
    12001 ctgccacctt cttttcaagt tttcaaaaag gtttaggcaa tgtaaagttt gatgctcttt
    12061 atcaattcac acagcatcct atgcaggagt ttttccacca gattccactg ttaaaagatg
    12121 aattgactcg gtatgcgaaa tcaaacaata ccgttgttat tcaagcgagt tctgatgtaa
    12181 gtttacagac tttacagaaa actttacaag agtatgatat ccatcttcca gtacatgcag
    12241 cagataagtt agtagaaggt cagcaacagg ttacgattgg tcagttagtt tcaggttttc
    12301 atttgatgga tgagaaacta gttttcatta ctgaaaaaga gattttcaat aagaaaatga
    12361 agcgtaagac acgtagaacc aatatttcta acgctgaacg tattaaggac tatagtgaat
    12421 tagcagttgg tgactatgtt gttcaccatg ttcatggtat cggtcaatac ttaggaattg
    12481 agactattga aatttcaggc attcatcgtg attatttaac ggttcaatat caaaactccg
    12541 atcgcatttc tattcctgta gaacaaattg atcttctctc caaatactta gcgtccgatg
    12601 ggaaagctcc aaaagttaat aaactaaacg atggccggtt ccaacgaact aagcaaaaag
    12661 ttcagaagca agtggaggat attgcagatg atttgattaa gctttatgcg gagcgtagtc
    12721 agctgaaagg ctttgccttt tcaccagacg atgagaatca gattgagttt gacaactact
    12781 ttacacatgt ggaaaccgac gaccaacttc gttccattga tgaaatcaaa caagatatgg
    12841 aaaaagactc tccaatggat cgtttgctgg taggagatgt cggctttggt aagacagagg
    12901 tagctatgcg cgctgctttc aaagcagtca atgatggcaa gcaagtagct attcttgtac
    12961 ctacgactgt tttagcccag caacactatg ctaatttcca agaacggttt gcagaatttc
    13021 ccgtcaatgt ggatgttatg agtcgtttta aaacaaaggc agagcaggaa aaaacacttg
    13081 agaagttgaa aaaaggccaa gttgacatct tgattggtac ccatcgcctt ctatcaaaag
    13141 atgttgtttt tgctgattta ggtttactgg ttattgacga ggagcaacgg tttggtgtca
    13201 agcataagga acgcttgaag gaactgaaaa agaaaataga tgtcctaacc ttgactgcaa
    13261 ctccgattcc tcggacattg caaatgtcca tgctgggaat ccgcgactta tcagtaattg
    13321 agactccacc gaccaatcgt tatcctgttc aaacatatgt gatggaaaca aatccatctg
    13381 taattcgaga tgcagttcta cgagaaattg atcgtggagg tcaggtttac tatctttaca
    13441 ataaagttga caccattgaa caaaaagtgt ctgaattaaa agaattagtt ccagaagcta
    13501 ctataggata tgttcatggt caaatgtcag agatccaatt agaaaatact ctctattcct
    13561 ttgtagaggg tgagtatgat attctagtga ccacaacaat cattgaaaca ggtgttgata
    13621 ttccaaatgc taatacactg tttattgaaa atgcagatca tatgggactg tcaactcttt
    13681 atcaacttag aggacgtgtt ggccgttcca gtcggattgc ctatgcctat ctcatgtacc
    13741 gtccagacaa gtccttgaca gaagtagctg aaaaacgttt ggaggcaatc aagggcttta
    13801 cagaactagg atcaggtttc aagattgcca tgcaagattt gtctatccgt ggtgcgggaa
    13861 atattttagg tgctgctcag tcgggtttta ttgattctgt gggatatgag atgtattcac
    13921 aattgctgga acaagccatc ttggaaaaac aaggtaaggc aactcaacgt cagaagagta
    13981 attcagaggt taatttacag attgacgcct atctaccaag tgactacatt gctgatcaac
    14041 gtcaaaaaat tgaaatttac aagcgtataa agaatattga cagtcgtgtc aactatcaag
    14101 aattgcaaga agaattgata gaccgttttg gagagtatcc tgatgtagta gcttacttgc
    14161 ttgaaatcgg tctattgaag tcatttttag accaagtttt ctgtcataca gttcttagac
    14221 gacaacatca agtgacagtg acattcgaac ctatggctgg tcaaattttc ctaacgcaag
    14281 attactttga agctttatct gtgacaaatt tgaaagctca gataacggaa aataaaggaa
    14341 agctagctgt tgtgtttaac attcaacaga aaaaagaata tgaaatatta gaggaattga
    14401 tttcttttgc cgaaaaatta aaagaaatta aagcaaggaa ggcagaataa atttctcaaa
    14461 taccttgaaa aatggtaaaa taatgaactg aggtaaagta tgagactaga taaatatttg
    14521 aaagtatccc gcattatcaa gcgtcgaaca gttgcgaagg aagttgccga taaaggacga
    14581 ataaaagtca atgggatttt ggcgaaatcc tcaacagatt taaaagtaaa tgatcaggtt
    14641 gaaatccaat ttggtaataa actactcact gtaaaagtac ttgaaatgaa agattcgact
    14701 aaaaaagaag acgcactgaa aatgtatgaa attatcagtg aaaaaaggat agaaaaagat
    14761 gaagaaatct aaaattctac aactgaataa tgcctttatt cagtcggagc gtaaaaaaac
    14821 tcagcatcaa ttggcagaac gccaacaaaa aaatcgtttt atgggtgcaa ttctcattct
    14881 agttatcttt ctttttatgt tgcctgccta taatcttgtt gggacttaca ctaatattca
    14941 gcagcaggaa aagaagcttg ctgaattgga aaaaaattac gaagaactga ccaaagaaca
    15001 gaagcaggaa gcagagatgg ttgcaaaatt gaaaaatgag gaatacgcag caaagtatgt
    15061 tcgggctaag tatcaatact ctaaagaagg ggaatttgtc tacaatattc cagggttacc
    15121 aaaatgaccg aatctatttt taaaattgta gagcaatttt tacagcattc tgatgaaaaa
    15181 ttagaagagt tgaatcaaaa gaatagagaa ttaaagttag aagaaaatga atcgtagaaa
    15241 ggagggagta tgcagaaaaa actgctcgta tggttattgc cagttttgtt tggatggcag
    15301 gtggtcgata gtacagaaat accatttgaa ctcacagcgc aagaagaata cgaattgact
    15361 catactatct atgatcagta ttttcaaact atccctcaaa acccaaatgt ttttcaaact
    15421 gagaatcttt attcggatga agaactgact atagcaggtg gacaattaca gccgaaccaa
    15481 catttttcta ttacggatgt tctagtcaat agcaaaaaag aattggtttt ccaaatagat
    15541 gacaagggtt acattcttgc aagtaggcat ctactatttg atgatgtaat tgttacagaa
    15601 acgactgttg agcaaactta ttggacaaaa aaaggtttca cattgttaac ctcaccaatt
    15661 gctaacgaag ctacggaaat aaaaaatgat ttacaaccct atcaagctgt tatggtttct
    15721 aaaatcgtaa caacttccct aggtgatttt gcctatgtta cagataaagg ttggattgca
    15781 gtaaataatc tttctaaaac ggataataga gtagaagccg ttcaagagtt gttgactaac
    15841 aaatattcta aagatactat tggtatatat gtgaaacaat tgtcaacagg tcaaactgca
    15901 ggtgtaaatc aagagaaact attctattct gccagcattg ctaaactacc aattatttat
    15961 tacgttcaag agcaactgaa tgctgggtat attgatttga ctactaaagt gaaatataca
    16021 gccgaatcta tatccttccc aggagcttat gttgctggag gaagtggttc actgtcaaaa
    16081 aaacctgaca acaaagatta ttcagtggaa gaattgatca ataagactgc taaagagtca
    16141 gataatgtag ctagtaattt actttcttat tatgtagcta ataaattcga ttctaatttt
    16201 tatcaagtaa taactgctaa aacaggtagt gagtggagta tggttacacg tgaaacttca
    16261 gctgagatcg cagggaaaat gatggaagcc ttatatattc aaaatggcta tgtgctagaa
    16321 agtttgttat ctactcaatt tgataatcaa cgtatttcga aagatatctc agttccagtt
    16381 gctcataaaa ttggcgatgc agatgatgtc aaacacgatg tagcgattgt ttacgcaggg
    16441 tctccttttg ttttatctat ttttacagat aaatcaaatt atgatgagat tacacaaatt
    16501 gcaaatgata tttacgggat tttaaagtaa atgaaagata gatttttaaa agtgacactg
    16561 gatggtcact tttttgataa acataagaaa gtactagtag ccgtatctgg tgggttagat
    16621 tctatgaacc tattccatct tttatacgaa tacaaacaag tgttagggat tgaacttgga
    16681 attgcccata ttaatcatgg acagagagaa gaatctgtca ttgaggaaaa atatcttaga
    16741 cagttagcag aagaaagtaa tgttcccttt tatctgtcct attttgaagg tgttttttca
    16801 gaagaagcgg cgcgaaaatg gcgttatgga ttttttgcta caatcatgga gaaggaaggc
    16861 tacactgcac tagtgacagc ccaccatgca gatgatcaag cagaaactgt ctttatgcga
    16921 ttgattagag gagggcgttt acgtcactta tcagcaattc aaccgactca gccttttgca
    16981 acaggggaac ttattcgacc acttttatct tttaaaaagg cagattttga aaagctattt
    17041 cattttgaag attgcagcaa tgcagatttc aaatattttc gaaatagagt cagaaatgac
    17101 tatttaccaa agttaaaaca ggaaaatcct aaaatcgaac ttactctcaa taatcttgca
    17161 gttgatacaa ataatctatt tcaagctcta agagatttga cacaggattt atccgttaca
    17221 gatgtgatga gttttcaaca acagacacct gcggtacaaa gttatctatt agaggaatat
    17281 tttgaaaaat ttcctgattt acagctctct cgtccacaat ttaatgaagt attacacatc
    17341 ttgcgttcaa aagctaacca ctatcattta ttgaaaaatg attacatgct agaaaaggat
    17401 tatcatcgtt ttcaaattta taaaatagga ccagagacgg atagtcaacc agaaaaaatc
    17461 atgataaaat cagatggtat tttttcttac ggttcatata ttttttcttt caatcatcct
    17521 ttggaagaag cggatagtat tttatatttt cctacagaaa atccaattgt agtgaggaga
    17581 aggcaggctg gggataccat tttaataaac ggagtaaata aaaaactccg ccgttggttt
    17641 attgataata aaatctcaca gaaagttcga caaaatgcgc ttattatcga gcagaatgga
    17701 gaaatttatg gaattacgaa tcttgttagc agtgatttga gtaaatcagt aaaaaatgat
    17761 ataatcaaag ctaccttata tataaaaatg aaagagtaga acaactatgt tggacaaaga
    17821 tattaagaaa attcttgttt cagaagaaga aatcgttgca aaatgcaaag aactcggtca
    17881 aattctagca acagactatg cagataagaa tcctattctt gtaggaattt taaaaggttc
    17941 tatcccattt atggcagaat taatgaaaca tattgatgcc catgtagaaa cggattatat
    18001 ggttgtttct agctaccatg gcggaacgga gagtagcggt accgttaaga tcatcaagga
    18061 tttggacaat agtgttgcag gtcgacatat catcttcgta gaggatatta ttgacactgg
    18121 tcgcacatta aaagaattga aagaactctt tgctttgcgt caggcagctt ctattaaaat
    18181 tgccactctt cttgataaac cagagggtcg tgttgttgaa atcgagccag actacacttg
    18241 ctttactatt ccaaatgaat ttgtagttgg atttggctta gattatgatg aaaattatcg
    18301 taatcttcct tatgttggtg tactcaaaga ggaagtttac acaaaataga aaaaggtttc
    18361 ctactatatt atgaacaatc aaccaaataa aggatttata aaaaatcctt ttctcattat
    18421 tctcgttatt gccactattg ttacagcctt tcaatttttt aacgctggtc agcaagtagc
    18481 aactcaagaa atcagtta
//
LOCUS       DBNFCX010000040        18453 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.040, whole genome shotgun sequence.
ACCESSION   DBNFCX010000040 DBNFCX010000000
VERSION     DBNFCX010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 18453)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18453)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18453
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.040"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            147..788
                     /locus_tag="AC1PJC_001218"
     CDS             147..788
                     /locus_tag="AC1PJC_001218"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HIP6620206.1"
                     /translation="MVKAIIFDMDGVLFDTETFYFQRRANFLATKGLSVDHLDPSIFV
                     GGRASQIWQRILGDDYDNWDVPALEEEYRVYKEKRPTPYAERIFPEVKAVLERLTIQG
                     IPVVLASNTDRSEIERALLDAGIRSHFSHVFSAMDCEAPKPDPAVYVKAASATGVAKS
                     DILVFEDSAKGIEAAKKAGLTVWAIRDQHYGIDQSKADKLVDNLEDAFDLLRF"
     gene            1226..2017
                     /locus_tag="AC1PJC_001219"
     CDS             1226..2017
                     /locus_tag="AC1PJC_001219"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HIP6620207.1"
                     /translation="MAYQTIRYEVIDSVAILTLNRPEVANGFNIPMCEEILEAIRLAE
                     GDASVKILQIQAQGSIFSVGGDLVEMKRAVDDDDIASLVKIAELVNDISFAMKKLSKV
                     VIMVTDGAVAGAAANMAVAADFVIASSKTKFIQAFVGVGLTPDAGGLFLLSRAIGANR
                     ASHLAMTGEGLSADKALEYGIVYKLAEPEKLEKTVAQVIKKLLRGSVNSYAAIKQLTW
                     ESQFKDWESYRRLELDLQETLAYKEDFKEGVRAHAERRRPVFTGD"
     gene            2098..2532
                     /locus_tag="AC1PJC_001220"
     CDS             2098..2532
                     /locus_tag="AC1PJC_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HIP6620208.1"
                     /translation="MEDPKVNEYLTAIFNNVLVIEETSLRGSRFNDISIKEMHTIDVI
                     GSIDGATPSDVARTLMVTLGTVTTSLNNLERKGYVERIRSTKDRRVVHLYLTKKGRLV
                     YRLHQRFHNEMVKQITDGMDETEYQVMKKGLMKLYHFLEDLK"
     gene            2529..3506
                     /locus_tag="AC1PJC_001221"
     CDS             2529..3506
                     /locus_tag="AC1PJC_001221"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HIP6620209.1"
                     /translation="MRNHAKISQVAHYLPKKIVTNDDLAQRMETSDEWIRSRTGIGQR
                     HIVTGEMTSDLASQVARKLLEKSQLDASEIDFIIVATITPDASMPSTAAMVQAAIGAK
                     KAFAYDLVAACSGFVFALSTAEKLLASGVYKRGLVIGAETLSRSVDWSDRSTAVLFGD
                     GAGGVLLEACEQPTFLAEILRTDGGRGASLTAGIDQKETPFSTQSCQQPFIQMEGRAI
                     FEFATRDVTATMAELLEQADMTVDCVDYFLLHQANIRILDKMARKLGVVREKFPANMD
                     KYGNTSAASLPILLSECVESGMLRLDGSQTILMAGFGGGLTWGTLLLQL"
     gene            3566..3790
                     /locus_tag="AC1PJC_001222"
     CDS             3566..3790
                     /locus_tag="AC1PJC_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000035 - acyl binding [Evidence IEA];
                     GO_function: GO:0000036 - acyl carrier activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HIP6620210.1"
                     /translation="MAVFEKVQEIIVEELGKDAEEVTLTTTFEDLDADSLDLFQVISE
                     IEDAFDIQIDTEEGLTTVGDLVAYVEEKTK"
     gene            3961..4926
                     /gene="fabK"
                     /locus_tag="AC1PJC_001223"
     CDS             3961..4926
                     /gene="fabK"
                     /locus_tag="AC1PJC_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018580 - nitronate monooxygenase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-[acyl-carrier-protein] reductase FabK"
                     /protein_id="HIP6620211.1"
                     /translation="MKTKITELLDIKYPIFQGGMAWVADGDLAGAVSNAGGLGIIGGG
                     NAPKEVVKANIDKVKSITDKPFGVNIMLLSPFADDIVDLVIEEGVKVVTTGAGNPGKY
                     MERLHAAGITVIPVVPSVALAKRMEKLGVDAVIAEGMEAGGHIGKLTTMTLVRQVVEA
                     VSIPVIAAGGIADGAGAAAAFMLGAEAVQVGTRFVVATESNAHQAYKEKVFKAKDIDT
                     TVSASIVGHPVRAIKNKLSSAYAAAEKDFLAGKISADAIEELGAGALRNAVVDGDVTN
                     GSVMAGQIAGLVSKEESCEDILKDIYYGAAKVIREEASRWASVGE"
     gene            4928..5848
                     /gene="fabD"
                     /locus_tag="AC1PJC_001224"
     CDS             4928..5848
                     /gene="fabD"
                     /locus_tag="AC1PJC_001224"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HIP6620212.1"
                     /translation="MTKIAFLFAGQGSQTVGMARDLYENYPIVRETFDQASQILGYDI
                     RDLIDNQEDKLHQTRYTQPAILTTSVAIFRLLEEEGVQPDMVAGLSLGEYSALVASGA
                     LAFEDAIALIAKRGEYMETAAPAGTGKMVAVLNTDVNLIEEICSTVTSGIVSPANYNT
                     PAQIVIGGEVAAVDEAVEALKAAGVKRMIPLNVSGPFHTALLRPASEQLAQALERVEF
                     ADFQVELVGNTEAKVMKKEDIKSLLTRQVMEPVRFYESIATMQEAGVTNFIEIGPGKV
                     LSGFVKKIDKTAHVIAIEDIAGLQIVLNKS"
     gene            5858..6592
                     /gene="fabG"
                     /locus_tag="AC1PJC_001225"
     CDS             5858..6592
                     /gene="fabG"
                     /locus_tag="AC1PJC_001225"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011225529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HIP6620213.1"
                     /translation="MELTNKNVFVTGSSRGIGLAIAHKFASLGANVVLNGRGQLGQDL
                     LDSFADYGVKVLAISGDISSAQDAKRMVAEAIETLGSVDILVNNAGITKDGMALRMTE
                     EDFDTVLKVNLTGTFNMTQAVLKPMTKAREGAIINLSSVSGLIGNAGQANYSASKAGV
                     IGFTKAIAREVAGRNVRVNAIAPGFIQSDMTDVLSDKIKEAMTAQIPMKRFGATEEVA
                     DVAVFLAKQEYLTGQVIAVDGGLTMQ"
     gene            6606..7841
                     /gene="fabF"
                     /locus_tag="AC1PJC_001226"
     CDS             6606..7841
                     /gene="fabF"
                     /locus_tag="AC1PJC_001226"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HIP6620214.1"
                     /translation="MTKLNRVVVTGYGLTSPIGNTPEEFWDSLVNGKIGIGKITKFDT
                     SEYSVHNAAELKDFPFDKYFVKKDTNRYDNYSLYALYAAKEAIANAQLDTETVDSDRF
                     GVILSTGIGGILEIEEQVARMNEKGPKRIRPMALPKALPNMAAGNIAMQVGANGVCKC
                     VITACASSNDALGEAFREIKFGFQDVMLAGGAEAAITPFAIGGFQALTAMSTTEDPER
                     ASIPFDKDRNGFVMGEGSAVLVLESLEHAEARGATILAEIVGYGNTCDAYHMTSPHPE
                     GLGAIKAMKLAISEAGLEPADIDYINAHGTSTPANEKGESQAIVSVFGKNTPVSSTKS
                     FTGHLLGAAGAVEAAAVIEAMRHSYAPKTAGTTELSEDIEADVIYGQGRDMEIRHAIS
                     NTFGFGGHNSVIAFKRWEA"
     gene            7842..8318
                     /gene="accB"
                     /locus_tag="AC1PJC_001227"
     CDS             7842..8318
                     /gene="accB"
                     /locus_tag="AC1PJC_001227"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019775161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HIP6620215.1"
                     /translation="MNITEMKDLMSQFDQSSLREFSYSNAGETLHFSKNQQAIAAPSP
                     IVEAPLAPVAPASPAPVPAVETSEPAPVEASSAPAAEGAVVESPLVGVAYLSPAPDKP
                     AFVAVGDTVKKGQTLMIIEAMKVMNEVPADRDGVVTEILVANQDVVEFGQGLVRIK"
     gene            8315..8737
                     /gene="fabZ"
                     /locus_tag="AC1PJC_001228"
     CDS             8315..8737
                     /gene="fabZ"
                     /locus_tag="AC1PJC_001228"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000565430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0019171 -
                     (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HIP6620216.1"
                     /translation="MIDILKIKEALPHRYPMLLVDRVLEVSEDEIVALKNVTINEPFF
                     NGHFPDYPVMPGVLIMEALAQTAGVLELSKEENKGKLVFYAGMDKVKFKKQVVPGDQL
                     IMTAKFVKRRGTIAVVEAKAEVDGKLAASGVLTFAIGN"
     gene            8762..10135
                     /locus_tag="AC1PJC_001229"
     CDS             8762..10135
                     /locus_tag="AC1PJC_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HIP6620217.1"
                     /translation="MFEKILIANRGEIAVRIIRAARELGIATVAVYSEADKEALHTML
                     ADEAVCIGPARSTDSYLNMQAVISAAVVTGAQAIHPGFGFLSENSKFATLCEEVGIKF
                     IGPSGTVMDTMGDKINARAEMIKAQVPVIPGSDGEVLTSQEALAIAEKIGYPVMLKAS
                     AGGGGKGIRKVEKAEDLVPAFESASSEAKAAFGNGAMYMERVVYPARHIEVQILADQH
                     GHVIHLGERDCSLQRNNQKVLEEAPSIAIGQTMRERIGQAAVRAAQSVGYENAGTIEF
                     LLDEAKGEFYFMEMNTRVQVEHPVTEFVTGVDIVKEQIKIAAGQELSVRQEDVRITGH
                     AIECRINAENPAFNFAPSPGKISNLYLPSGGVGLRVDSAVYPGYTIPPYYDSMIAKVI
                     VHGENRFEALMKMQRALYELEIDGVVTNTDFQLDLISDKRVVAGDYDTAYLMEEFLPR
                     YQEDLKK"
     gene            10150..11016
                     /gene="accD"
                     /locus_tag="AC1PJC_001230"
     CDS             10150..11016
                     /gene="accD"
                     /locus_tag="AC1PJC_001230"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HIP6620218.1"
                     /translation="MALFRKKDKYIRINPNRSRIESAPQAKPEVPDELFSKCPACKVI
                     LYKNDLGLEKTCQHCSYNFRITAQERLALTVDDGSFEELFTGIETKNPLDFPNYLEKL
                     AATRQKTGLDEAVLTGKATIGGQPVALGIMDSHFIMASMGTVVGEKITRLFELAIEEH
                     LPVVLFTASGGARMQEGIMSLMQMAKISAAVKRHSNAGLFYLTVLTDPTTGGVTASFA
                     MEGDIILAEPQTLVGFAGRRVIESTVRENLPDDFQKAEFLQEHGFVDAIVKRQDLPAT
                     ISRLLRMHGGVR"
     gene            11013..11786
                     /locus_tag="AC1PJC_001231"
     CDS             11013..11786
                     /locus_tag="AC1PJC_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HIP6620219.1"
                     /translation="MTSDVARMIRLARDQARLTTLDYATQLFDDFIELHGDRNFRDDG
                     AVVGGIGFLAGQPVTVIGIQKGKNLQDNLKRNFGQPHPEGYRKALRLMKQAEKFGRPV
                     VTFINTAGAYPGVGAEERGQGEAIARNLMEMSDLKVPIIAIIIGEGGSGGALALAVAD
                     QVWMLENSMYAVLSPEGFASILWKDGSRAMEAAELMKITSYELEKLQVVDWVVLENGR
                     ATKQVLADIKENLVSQLAQLQALPLEQLLENRYQRFRKY"
     gene            11850..12317
                     /locus_tag="AC1PJC_001232"
     CDS             11850..12317
                     /locus_tag="AC1PJC_001232"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIP6620220.1"
                     /translation="MLVKADLSNAEELLPIQHRAFAALYETYQDQYNPAIETMDYFQS
                     RFARPNCTYYKIVEEGHTVGLVRTTVAEDADQGWLGLIGIDPDHRGKGYGHKAMLELE
                     SLYPTVKRWVLCTVLQEPRLVAFYESLGYKAIKTEPEQEGMDMVYMEKWISGK"
     gene            complement(12486..12701)
                     /locus_tag="AC1PJC_001233"
     CDS             complement(12486..12701)
                     /locus_tag="AC1PJC_001233"
                     /inference="COORDINATES: protein motif:HMM:NF015957.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspC domain-containing protein"
                     /protein_id="HIP6620221.1"
                     /translation="MNKKWYKDKSRGELAGVIAGLYDYFDLYENYGWKLENVRWVVVI
                     LAIVTNLPFLTAYIILAILLPDKSELN"
     gene            complement(12713..13987)
                     /gene="serS"
                     /locus_tag="AC1PJC_001234"
     CDS             complement(12713..13987)
                     /gene="serS"
                     /locus_tag="AC1PJC_001234"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006144996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HIP6620222.1"
                     /translation="MLDIKRIRTDFDGVAAKLATRGVAAETLADIKELDAKRREILVT
                     VEELKAERNTVSAEIAQAKRNKENADDKIAAMQKLSADVKNLDAELLEIDEKLNAILA
                     VLPNTPHDSVPVGADEEENVEVRRWGTPREFTFEPKAHWDLGEDLDILDWERGAKVTG
                     ARFLFYKNLGARLERALYNFMLDEHIAEGYQEIITPYMVNHDSMFGTGQYPKFKEDTF
                     ELADTNFVLIPTAEVPLTNYYRNEILEEKDLPIYFTAMSPSFRSEAGSAGRDTRGLIR
                     LHQFHKVEMVKFATPEQSYDELEKMTANAENILQKLGLPYRVLALCTGDMGFSAAKTY
                     DLEVWIPAQNAYREISSCSNTEDFQARRAQIRYRDAADGKVKLLHTLNGSGLAVGRTV
                     AAILENYQNEDGSVTIPEVLRPYMGGVDVIKP"
     gene            complement(14205..14576)
                     /locus_tag="AC1PJC_001235"
     CDS             complement(14205..14576)
                     /locus_tag="AC1PJC_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF956 family protein"
                     /protein_id="HIP6620223.1"
                     /translation="MAQSQNTSVELQTTGVSYMGFGGKVGKFLIGDKALEFYPDSNVE
                     RYIQIPWSEMTSIGANVSGKAISRHFEIYTEKSRFLFASKDSGKILKIAREHIGNEKV
                     VKLPTLMQTIGRKISNLFAKK"
     gene            complement(14636..15547)
                     /locus_tag="AC1PJC_001236"
     CDS             complement(14636..15547)
                     /locus_tag="AC1PJC_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HIP6620224.1"
                     /translation="MSEKIQLSVSDRKKVWWRSTFLQGSWNYERMQNLGWAYAMIPAI
                     KKLYTKKEDQAAALERHLEFFNTHPYVASPILGVTLALEEERANGAEIDDTAIQGVKI
                     GMMGPLAGIGDPVFWFTVRPILGALGASLALSGNIMGPIIFFLGWNAIRMAFLWYTQE
                     FGYKAGSEITKDMSGGILQDITKGASILGMFILAVLVQRWVSITFAVNLPAKQLSEGA
                     YIVFPEGTVTGAELKGILGQALSGLSLEPTQAQTLQGQLDSLIPGLMGLLLTFLCMHL
                     LKKKVTPITMIIGLFIVGILARFFNIM"
     gene            complement(15565..16371)
                     /locus_tag="AC1PJC_001237"
     CDS             complement(15565..16371)
                     /locus_tag="AC1PJC_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001280330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0034219 - carbohydrate transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter subunit
                     IIC"
                     /protein_id="HIP6620225.1"
                     /translation="MDITLISAILVVIVAFFAGLEGILDEFQFHQPLVACTLIGLVTG
                     NLAAGVMLGGSLQMIALGWANIGAAVAPDAALASVAAAIIMIKGGDFSTEGIAVATTT
                     AIPLAVAGLFLTMIVRTISVGLVHGADNAAKDANFAAVERYHLFALLLQGLRIAVPAA
                     LLLAIPAEAVQSVLEAMPAWLSGGMAVGGGMVVAVGYAMVINMMATREVWPFFALGFA
                     FAAISQLTLIALGVIGVAIALIYLNLSKQGGSGNGGASSNDPIGDILEDY"
     gene            complement(16401..17393)
                     /locus_tag="AC1PJC_001238"
     CDS             complement(16401..17393)
                     /locus_tag="AC1PJC_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000021981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HIP6620226.1"
                     /translation="MSIGIIIASHGEFAAGIHQSGSMIFGEQEKVQVVTFMPSEGPDD
                     LYAKLNAAVDAFDADDEVLVLADLWSGSPFNQASRVAGENPDRKFAIITGLNLPMLIQ
                     AYTERMINAAAGVEEVAANIIKEAKDGIKVLPEELQPAEATPVADAAPVALQGAIPPG
                     TVIGDGKLKINLARIDTRLLHGQVATGWTPASKADRIIVASDTVAKDELRKQLIKQAA
                     PGNVKANVVPIKKLIEVSKDPRFGNTHALILFETPQEALEAIEGGVEIKELNVGSMAH
                     STGKTMVNNVLSMDKDDVATFEKLRDLGVEFDVRKVPNDSKKDLFELINKANVQ"
     gene            complement(17615..18427)
                     /locus_tag="AC1PJC_001239"
     CDS             complement(17615..18427)
                     /locus_tag="AC1PJC_001239"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HIP6620227.1"
                     /translation="MKKKIIAIDLDGTLLNNDSQLSDYTISTIKKVRQAGHTVLIATG
                     RPYRMAEKFYQQLELDTPMINFNGSLVHIPGKKWQWEQNILIDKKYLLEFLKEEETFE
                     ADFIAGEYKNKFYITQKNLDKIDPALMGVEQITPDTLIKPELITSDPHSILMQTRATD
                     KYELAKEMNAYFKDELEINTWGGPLNILETCAKGVNKATALSYVLNLYQATPSDLIAF
                     GDEHNDVEMLDLAGTAYAMKNCSDTLRPHADRLTAFANFEDGVARELENLFL"
BASE COUNT         5207 a         3664 c         4467 g         5115 t
ORIGIN      
        1 tagcagaatg atatgaaatt gtcagtatgt tcagacaaat cttgccaaga attttatcga
       61 aaaacgaaca agagacaagt atgaaaattt cagaaaaaca tttttttctt tcaactgtgt
      121 tacaattaaa gtaataggag gcgagtatgg taaaagcaat tattttcgac atggatggtg
      181 tactttttga cacagaaaca ttctattttc agcgacgagc gaatttttta gcaacaaaag
      241 gtttatcggt tgatcatttg gatccatcta tatttgtcgg tggaagggct agtcaaattt
      301 ggcaacggat tttaggggat gattatgata actgggatgt ccctgccttg gaagaagaat
      361 atcgtgtata taaagaaaag cgaccaaccc cttatgcaga gaggattttt cctgaagtta
      421 aagcggtatt ggagagactg actatccaag gtattcctgt agttttggct tcaaataccg
      481 accgttcaga aatcgaacgt gctctactag atgctggtat acgctctcac tttagtcatg
      541 ttttctcagc gatggattgt gaggccccaa aaccagatcc cgcggtttat gtgaaagcag
      601 ctagtgcaac aggagtagct aaatcggaca ttttagtatt tgaagatagt gcgaagggga
      661 ttgaagcggc taaaaaagca ggtttgacag tttgggctat tcgagaccag cattatggaa
      721 ttgatcaatc gaaagcagac aaattggtag acaatcttga agatgccttt gacttattgc
      781 gattttaaga aatattatat tgtagtccaa gtattagttc tcgtgaaaaa tggtatttct
      841 agctcagaat ccagttaaat cttccaaaag tattaacgtg aaaaatgata gttgtaaatt
      901 aaacttagag cctataattt acagttcaga tttgcatatt gaggttgttt tttcaaaata
      961 cagtcagtat ttcccgcaaa aactaccttg atgagtgaaa aagccaaggc gcttttcgtg
     1021 tgaatatagg ttcttagaca cgttattttc tagcatatct aaattttata ttgcggatga
     1081 tagcccccat ctttttcgga cgtcacactt tacttgctag aaaaaaagtg acaattttaa
     1141 aaactgtgtt acaatggaaa acaagaattt gaagtttgat attcaaatct tttaattatc
     1201 aaactatttc gaaaggagca agggaatggc ctaccaaaca attcgttatg aagtaattga
     1261 ttccgtagcg attctaactt taaacagacc ggaagttgca aatggtttta atattcctat
     1321 gtgtgaagaa atcttagaag caatccgcct tgcagaaggg gatgcctccg tcaaaatttt
     1381 acaaattcaa gcacagggtt ccattttctc cgtgggtgga gatttagttg agatgaagcg
     1441 tgcagttgat gatgatgata ttgcttcttt ggtaaaaata gcagagctgg tgaatgatat
     1501 ttcgtttgcg atgaagaaat tgtctaaagt agtcattatg gtgacagatg gggcagtggc
     1561 tggagccgcg gctaatatgg cagtggcagc tgattttgtt attgcctcca gcaagacaaa
     1621 attcatccaa gcctttgtag gtgttggact tacgccggat gcgggggggc tctttttact
     1681 gagtcgtgct attggggcta atcgtgctag tcacttggcg atgacaggag agggcttatc
     1741 agcggataag gctttagaat atgggattgt ttataaattg gcagagccag aaaaactaga
     1801 aaagacggtt gcccaggtca taaaaaaact cttgcgaggc tcagtaaact cttatgcagc
     1861 aatcaaacaa ctgacatggg aaagtcaatt taaagactgg gagtcttatc gccgattgga
     1921 gctggatttg caagaaacat tggcctataa agaggatttt aaagagggag ttcgagcgca
     1981 tgcagaacga cgtagaccag tgtttacggg agattaattt ttaaattagt aaaaaaatgt
     2041 ttgacaatca aagttttatg gtttatactt tgactatcaa agtaaaggag gcctgttttg
     2101 gaagatccaa aagtaaatga atatctaacg gccattttta acaatgtgtt ggtgattgaa
     2161 gaaacaagtc tgcgtggtag ccgattcaat gatatttcaa ttaaggaaat gcacacgatt
     2221 gatgtgatag gaagtattga tggagctact ccgagtgatg ttgctcggac tttgatggta
     2281 accttaggta ctgttacaac tagcttgaac aatttggaaa gaaaaggata tgttgagcgt
     2341 attcgttcga ccaaagatcg gcgagttgtt catctctatc tgaccaaaaa aggtcgactg
     2401 gtctatcgtt tgcatcaacg atttcacaat gaaatggtga aacagattac agatggtatg
     2461 gatgaaacag agtatcaggt aatgaagaaa ggactcatga aactctatca cttcttggag
     2521 gatttgaaat gagaaaccat gctaaaatca gtcaggtggc ccactatctt ccgaagaaga
     2581 ttgtgaccaa tgatgatttg gctcaacgaa tggagaccag tgatgagtgg attcgtagcc
     2641 gtacaggtat cggtcaacgg cacattgtta ctggagagat gacgagtgat ttggctagtc
     2701 aagtggctag aaaattactg gaaaagtctc agctagatgc tagtgaaatt gacttcatca
     2761 tcgtagcaac gattactcca gatgcttcaa tgccatctac ggcagctatg gtccaagcag
     2821 caattggcgc gaaaaaggct ttcgcctatg atcttgttgc agcttgttca ggatttgttt
     2881 ttgcgctatc aacagcggaa aaattgcttg cttcaggagt ctataagaga ggacttgtca
     2941 ttggtgcaga gaccctatct aggtctgttg actggtcaga tcgatcaacg gctgttttat
     3001 ttggagatgg tgctggagga gttttgctgg aagcgtgtga acaaccaacc tttttagcag
     3061 aaatcttgcg aacggatggc ggtcgaggtg ctagtctgac agcagggata gatcagaaag
     3121 agacgccatt ttcgacacaa agctgtcagc aaccctttat ccaaatggag ggcagagcta
     3181 tatttgaatt tgcgacgagg gatgtcacgg caaccatggc agagctgcta gaacaagctg
     3241 atatgactgt ggattgcgtt gattatttct tgctccacca agccaatata cgtatcctag
     3301 ataagatggc tcgtaaattg ggagtggtgc gtgaaaaatt tccagcaaat atggataaat
     3361 atggcaatac cagcgcagca agtcttccta ttctcttatc agaatgtgta gagagcggaa
     3421 tgttgcgatt ggatggaagc cagactattc tcatggctgg tttcggtgga ggcctcacat
     3481 ggggaactct actcttacaa ctttagttaa ttccttgccc taggcaagat taaaatattt
     3541 tattttccaa aaggagacac atatcatggc agtatttgaa aaagtacagg aaatcatcgt
     3601 tgaagaattg ggtaaggatg ctgaagaagt aactcttaca acaacctttg aggatttgga
     3661 cgcagattca ttggatcttt tccaagttat ctctgaaatc gaagatgcat tcgacatcca
     3721 aatcgacact gaagaaggtt tgactactgt aggtgatttg gttgcctacg ttgaagaaaa
     3781 aacaaaataa tgactgttaa ggaaagtgct atttagcatt tttcttaaat taaatacttt
     3841 gataatcaaa acattgaaat atcaaactat tttttgagtg agggggcaac ccttcacttg
     3901 tttacctaat gatttgatat tcaaatgatt aggtaagcaa gaaaaaaaga tgagggaatt
     3961 atgaagacga aaataacaga attgctcgat attaagtatc caatttttca aggtggtatg
     4021 gcttgggtag ctgatggaga tttggctggt gccgtatcta atgcaggtgg tctaggaatc
     4081 atcggtggag gaaatgctcc caaagaggtg gtcaaggcaa atattgacaa ggttaaatct
     4141 atcacggaca agcctttcgg tgtcaatatc atgcttttgt ctccttttgc ggatgacatt
     4201 gttgacttgg tcattgaaga aggtgtgaaa gttgtcacca caggagcagg aaatccaggg
     4261 aagtatatgg agcgtctcca tgctgcaggg attacagtta ttcctgttgt accgagtgta
     4321 gcccttgcga aacgcatgga aaaattaggg gtagatgctg ttattgctga aggtatggaa
     4381 gccggaggcc atattggtaa attgaccacc atgaccttgg ttcgtcaggt tgttgaagcc
     4441 gtatctattc ctgttattgc tgctggaggt attgcagatg gtgcaggtgc tgcggcagcc
     4501 tttatgttgg gagcagaagc ggtgcaagtt ggaactcgtt ttgtagtagc tacagagtcc
     4561 aatgcccatc aggcttataa ggaaaaagtt ttcaaagcta aggatattga tacaactgta
     4621 tctgcttcta ttgttggaca tcctgtgaga gccatcaaga ataagttatc atctgcttat
     4681 gcagctgcag agaaagattt cttggcaggt aaaatttcgg cagatgctat tgaagaactt
     4741 ggtgcgggag cactccgcaa tgcagttgtt gatggtgatg taacaaatgg ctccgtgatg
     4801 gctggtcaaa ttgctggtct ggtttctaaa gaagaatctt gtgaagatat tttgaaagac
     4861 atctattatg gagcagccaa agtgattaga gaagaggcaa gccgttgggc ttcggttgga
     4921 gaataggatg acaaagatag cttttctttt tgcaggtcaa gggtctcaga cagttgggat
     4981 ggctcgcgac ctttacgaaa attacccgat agttagagaa acgtttgatc aggctagtca
     5041 gattttgggg tatgacattc gcgacctaat tgacaatcaa gaggataaat tacatcagac
     5101 tcgctatacc caacctgcta ttttgaccac ttctgtggct atttttcgac tgctggaaga
     5161 agagggagta caacctgata tggtagctgg tctatccttg ggagaatatt cagctctggt
     5221 agcatcggga gctttggcct ttgaagatgc gattgccctg attgctaagc gtggtgaata
     5281 tatggaaacg gctgcgccag cggggactgg taagatggtt gcggttctca acacagatgt
     5341 caacttgatt gaagaaatct gttcgactgt tacctctggg attgtttccc cagccaacta
     5401 caacacacca gcccaaatcg tcatcggtgg cgaggtggct gcagtggatg aggcggtgga
     5461 agccttgaag gcggcgggtg tcaaacggat gattccgctc aatgtatctg gcccttttca
     5521 tacagctctc ctgagaccag catcggagca actggctcag gccttggagc gggtggaatt
     5581 tgcggacttc caagtagagt tggtcggtaa tacggaagcc aaggtcatga aaaaagagga
     5641 catcaagtcc ctcttgaccc gtcaagtgat ggaaccagtt cgtttctatg agtcaatcgc
     5701 aaccatgcag gaagctggtg tgactaactt tattgaaatc ggtccaggta aagtcttatc
     5761 aggatttgtc aagaaaatcg ataagacagc gcatgttata gcaattgaag acatagcggg
     5821 gctacaaata gtattgaata aatcatgagg aggaatcatg gaattaacaa ataaaaatgt
     5881 ttttgtaaca ggttcaagtc gaggaatcgg cttggccatt gcccataagt ttgccagctt
     5941 aggagcaaat gttgttctta acggtcgtgg tcagctaggc caggacttgc tagatagctt
     6001 tgcagattac ggtgtgaaag tcctagctat ttcaggagat atttcgagcg cgcaagatgc
     6061 caaacgaatg gtggcagaag ctatcgaaac cctcggtagc gtcgatattt tggtcaacaa
     6121 tgcagggatt accaaagacg gtatggctct tcgtatgaca gaagaggatt ttgatacggt
     6181 tctgaaggta aatcttactg gaacttttaa tatgacgcag gctgttttga aaccaatgac
     6241 aaaggctcgt gagggtgcta ttatcaatct atcaagtgta tctggcttga ttggaaatgc
     6301 tggacaggcc aactattctg cttctaaggc aggtgtgatt ggattcacta aagccattgc
     6361 ccgtgaggtt gctgggcgaa atgttcgtgt caatgcgatt gcgccgggct ttatccagtc
     6421 agatatgaca gatgttttat ctgacaagat taaagaagct atgactgcac aaattccgat
     6481 gaaacgcttt ggtgcgacag aagaagtagc tgatgttgcc gtattccttg ccaagcaaga
     6541 atatctaaca ggacaggtga ttgcggttga cggcggcttg accatgcagt aagagaggtt
     6601 tgaaaatgac aaaactaaat cgtgtagtgg tgacaggcta cggtctgaca tcgccaattg
     6661 gaaatacacc agaagaattc tgggatagct tggtcaatgg caagattggg atcggaaaga
     6721 ttaccaagtt tgataccagt gaatattcgg tccataatgc tgcggaatta aaagattttc
     6781 cttttgacaa atatttcgtt aaaaaggata caaatcgcta cgataattac tcgctctatg
     6841 cactctatgc agctaaagaa gcgattgcta atgcacagct ggatacagag acagtggata
     6901 gtgaccgttt tggcgttatc ttatcaacag gtatcggtgg tattttggaa attgaagagc
     6961 aagtggctcg tatgaacgaa aaaggtccaa aacgcattcg tcccatggct cttccaaagg
     7021 ccttgccaaa catggctgct ggaaatattg ctatgcaggt cggtgcaaat ggtgtctgta
     7081 agtgtgtcat cacagcctgt gcttcgtcaa atgatgcctt aggagaagcc ttccgtgaaa
     7141 tcaagtttgg tttccaagat gtcatgttgg caggtggagc agaagcagcc attactccgt
     7201 ttgcaatcgg tggtttccaa gctttgacag ctatgtcgac tactgaggat ccagaacgtg
     7261 cgtctattcc atttgacaag gatcgcaatg gttttgtcat gggagagggt tccgcggttt
     7321 tagtattgga aagtttggaa cacgcagaag cgcgtggggc gacgattttg gctgaaatcg
     7381 ttggttatgg aaatacttgc gatgcttacc acatgacttc gccacatcca gaaggtctgg
     7441 gtgctattaa ggccatgaag ttggccattt cagaagcagg tttagagcca gctgatattg
     7501 actacatcaa tgcccatggt acttcgacac cggctaatga aaaaggggag agccaagcta
     7561 tcgtatccgt cttcggcaag aacacgccag tttcttccac caagtccttc actggtcact
     7621 tgttgggtgc agcgggtgcc gttgaagcgg cagctgtcat tgaggctatg cgtcattctt
     7681 acgcaccgaa gacagctggt acgacagaat tatctgaaga tattgaagcg gatgtcattt
     7741 atggacaggg gcgtgatatg gaaatccgcc atgccatttc aaatacattt ggctttggag
     7801 gtcacaactc ggtgattgcc ttcaagcgtt gggaggctta agtgaatatt acagaaatga
     7861 aggacttgat gagtcagttt gaccagtcaa gtttacgaga attttcatat agcaatgctg
     7921 gggaaacctt gcattttagt aaaaaccagc aggcgatagc ggctccgagt ccaatcgtag
     7981 aagctccgct tgctccagta gctcctgcaa gcccagcccc tgtgccagca gttgaaacca
     8041 gtgagccagc tccagtagaa gccagctcag ctcctgcggc agaaggtgcg gtagtggaaa
     8101 gtccacttgt tggtgtggcc tatttgtcgc cagctcctga caagccagcc tttgtggcag
     8161 ttggggatac ggttaaaaaa ggccagaccc tcatgattat cgaagccatg aaggtcatga
     8221 acgaagtgcc agctgaccgt gacggtgttg tcacagagat tttggtggcc aaccaagacg
     8281 ttgtagaatt tggacaagga ttggtacgca tcaaatgatt gatattttga aaattaaaga
     8341 ggctcttcct catcgctacc ctatgctcct ggtcgatcgt gtccttgaag tgtcggaaga
     8401 tgagattgtc gccctcaaaa atgtgaccat taacgagccc ttcttcaacg ggcatttccc
     8461 agactatcct gttatgccag gtgtgcttat catggaggct ttggcacaaa ccgcaggtgt
     8521 cttggagtta tccaaggaag aaaacaaggg caagctggtc ttttatgccg gcatggacaa
     8581 ggtcaaattt aagaagcaag ttgtacctgg tgaccagttg atcatgacag ctaaatttgt
     8641 caaacgccgt ggaaccattg cggtcgttga agcaaaggca gaggtggacg gaaaactggc
     8701 tgcgtcgggg gtactaacct ttgctattgg aaattagtat ctaaaggaga taggattcat
     8761 catgtttgag aagattttga ttgccaatcg tggtgagatt gcggtgcgga tcattcgtgc
     8821 ggccagggag ctggggattg cgacggtggc tgtctattca gaggctgaca aggaagccct
     8881 ccacaccatg ttggcagatg aggctgtctg tatcggacct gctcgttcga cagactccta
     8941 tctcaatatg caggcggtca tctcggcggc tgttgtgaca ggtgcccagg ccattcaccc
     9001 aggttttgga tttttgagtg aaaactctaa gttcgccacc ctctgtgaag aggttggtat
     9061 caagttcatc ggaccttctg ggacggttat ggatacgatg ggcgataaaa tcaatgcccg
     9121 agcagagatg attaaggctc aggtgcctgt tattcctggg tcagacggtg aagttttgac
     9181 cagccaagaa gctcttgcaa tcgctgagaa gattggttac cccgtcatgc tcaaggcatc
     9241 ggcaggaggt ggcggtaagg ggattcgtaa ggtggaaaaa gctgaagacc tagtgcctgc
     9301 ctttgaatca gcttccagtg aagccaaggc agcctttggc aacggagcca tgtatatgga
     9361 gcgtgtcgtc tatccagccc gccatatcga agtacagatt ttggcggacc agcacggtca
     9421 tgtcattcat ctgggagaac gggattgttc ccttcaacgc aacaaccaga aggtcttgga
     9481 agaagctccg tctatcgcca ttggtcagac tatgcgggaa cgtatcggtc aggctgcagt
     9541 ccgtgcagct caatcagtcg gctatgaaaa tgcaggaacc attgagttcc ttttggacga
     9601 agccaagggc gaattttact tcatggaaat gaacacacgg gtgcaggtag aacatcctgt
     9661 taccgaattt gtcactggtg tggatattgt caaggagcaa atcaagattg cggctggtca
     9721 ggaactcagt gtccgccaag aagatgtgcg gattacaggt catgccattg aatgccgcat
     9781 caatgctgaa aatccagcct tcaattttgc tccaagtcca ggtaagattt ccaatctcta
     9841 cctgccaagc ggaggcgttg gtttgcgtgt agattcagct gtttatcctg gctacactat
     9901 tccgccttac tatgattcta tgattgccaa ggttatcgtg catggggaaa atcgctttga
     9961 agccctgatg aagatgcaac gggccctcta tgaattggaa attgacggag tggtgaccaa
    10021 tacagacttc cagctggact tgatttccga caagcgagtg gtggcaggtg actacgatac
    10081 tgcctatctc atggaagaat ttttacctcg ctatcaagaa gatctaaaaa agtaaactag
    10141 gagaatgcta tggctttgtt tcgcaaaaag gacaaatata tccgcatcaa tcccaatcgt
    10201 tcgcggatag agtcagcacc tcaagcaaag ccagaggtgc cagatgaatt attttccaaa
    10261 tgtccagctt gtaaggtcat cctttacaag aatgatttag gattggagaa aacctgtcaa
    10321 cactgttcct ataattttcg gattacagct caggaacgcc tggctttgac agtcgatgat
    10381 ggttcgtttg aggaattgtt tacagggatt gaaaccaaaa atcccttgga ctttccaaat
    10441 tatctcgaaa aactggcagc cacccgtcaa aaaacaggct tggatgaagc tgttttgaca
    10501 ggaaaggcga caatcggcgg acagccagtt gctttgggaa tcatggattc tcactttatc
    10561 atggcctcta tgggaacggt agttggtgag aaaattaccc gcctctttga gttggcgatt
    10621 gaagagcatt tgccagttgt cctctttacc gcatctggtg gtgctcgcat gcaggaaggc
    10681 attatgagtc tgatgcaaat ggccaagatt tcggcagctg tgaaacgcca ctcaaatgct
    10741 gggctctttt atctgacggt cttgacagac cccacaacag gaggtgtgac agctagtttt
    10801 gccatggaag gtgatattat cctagcagag ccgcagacct tggttggatt tgcaggccga
    10861 cgggttattg aatcaaccgt tcgggaaaat ctgcctgacg atttccagaa ggctgaattt
    10921 ttacaggaac acggctttgt cgatgctatt gtcaaacgcc aggacttgcc agcgaccatc
    10981 agtcgcttgt tgagaatgca tggaggtgtc agatgaccag tgatgtagca cgtatgatcc
    11041 gtttggcacg tgaccaggct cgcctgacga ccttggacta tgccacacaa ctctttgatg
    11101 actttatcga attacacggc gatcggaatt tccgcgatga cggtgctgta gtgggtggca
    11161 tcggctttct agcaggtcag ccggtgacag tcatcggtat ccagaagggg aagaatctcc
    11221 aagacaacct caaacgcaac ttcggtcagc cccaccctga gggctaccgc aaggcccttc
    11281 gccttatgaa gcaggcggag aagttcggcc gtcccgttgt tacctttatc aatactgctg
    11341 gagcttatcc cggtgtcggt gccgaggagc gtgggcaggg cgaggccatt gcccgcaacc
    11401 tcatggagat gagtgacctc aaggtgccca ttatcgctat tatcatcgga gagggaggct
    11461 ctggtggagc ccttgctcta gcagtcgcag accaggtctg gatgctggaa aactccatgt
    11521 acgccgttct cagccctgaa ggttttgcct ctatcctctg gaaagacggc agtcgggcca
    11581 tggaggcggc agaactcatg aagattacct cctatgagtt ggagaaactc caagtggtcg
    11641 attgggtcgt tttggaaaat ggcagagcga ccaagcaagt cttggctgac atcaaggaaa
    11701 acctcgttag ccagttggct cagttacaag ccttaccact tgaacaacta ctcgaaaacc
    11761 gctatcaacg attcagaaaa tactaggaag acctagtatt tttttgatag atttgataca
    11821 atggataaaa tcatttcagg aggttttcca tgttagtaaa agcagatcta tcaaacgcag
    11881 aagaattgct acctattcag caccgagcat ttgcggcttt atatgaaacc tatcaggacc
    11941 agtacaaccc tgccattgaa actatggact atttccaatc acgctttgca cgaccaaatt
    12001 gcacctacta caagattgtt gaggaagggc acacagtcgg tttagtgcga acaacggtcg
    12061 ctgaagatgc tgaccagggc tggctaggtc tgattggcat tgatccagac cacagaggaa
    12121 aaggctatgg tcacaaggct atgttagaat tggaaagcct ttatccgaca gtcaagcggt
    12181 gggtactctg tactgtcttg caggagccta gattggtcgc tttctacgaa agtctgggct
    12241 ataaggctat caaaaccgag cctgagcagg aaggcatgga tatggtctat atggagaagt
    12301 ggatttcagg gaaataaaaa gacatttctg ttagtcaaac ggacaacggc aacatctttt
    12361 gttctcattt tgattgatcc tagagcaata ctttttatca ataatgcctg gtcgatagtg
    12421 gtattttgcc actttaaata agtgacaaaa aagacgattc cgtttggagt cgtcttttgc
    12481 gtgctttagt tgagttcaga cttgtctggt aaaagtatgg ccagaatgat ataggcggtt
    12541 agaaagggta aattggtcac aattgctaag atgacaacaa cccatcgaac attttctaat
    12601 ttccaaccgt agttctcata taggtcaaag tagtcataaa gacctgcgat aacgccagcc
    12661 agttcaccac gacttttgtc cttataccat ttcttattca tcttccttac ccctaaggtt
    12721 taatcacatc aaccccaccc atgtatggac ggagaacttc tggaatggtc actgaaccat
    12781 cttcattttg atagttttca aggatggcag ccactgtacg accaaccgct agaccagaac
    12841 cgttgagggt gtggagcaat ttgactttac cgtcagcagc atcgcggtag cggatttggg
    12901 cgcgacgagc ttggaaatct tctgtgttgg aacagcttga aatttcacgg taggcatttt
    12961 gggctggaat ccagacttcc aagtcgtagg tcttagcagc tgagaagccc atatcgcctg
    13021 tgcagagggc taaaacgcgg tatggcaagc ctagtttttg aaggatattt tctgcgtttg
    13081 cggtcatttt ttccaattca tcataagact gttctggtgt ggcaaatttg accatttcaa
    13141 ccttgtggaa ttggtgaagg cggataagac cacgggtgtc acgaccggca gaaccagctt
    13201 cagaacggaa agatgggctc atggctgtga agtagattgg caggtctttt tcttccagaa
    13261 tctcgttgcg gtagtagttg gtcaacggca cttccgcagt tggaatgagg acgaagttgg
    13321 tatctgccaa ctcaaaagta tcttccttga atttaggata ttgaccagta ccgaacatag
    13381 agtcatggtt gaccatgtaa ggtgtgatga tttcttggta gccttctgcg atatgctcgt
    13441 ccaacatgaa gttgtagagg gcacgttcta agcgagcacc caagttcttg tagaagagga
    13501 agcgtgcacc agttactttt gcgccacgtt cccagtccag aatatctagg tcttcgccca
    13561 aatcccagtg agcttttggc tcgaaggtaa attcacgagg cgttccccag cggcgaactt
    13621 ccacgttttc ttcttcatct gcaccaacag ggacagagtc gtgcggtgta tttggaagaa
    13681 ctgcaagaat ggcatttagt ttttcatcaa tttccaagag ttcagcatcc aagtttttta
    13741 catcggcaga cagtttttgc atggcagcaa tcttgtcgtc agcattttcc ttgttgcgtt
    13801 ttgcttgggc aatctctgct gaaactgtgt tacgttcagc ttttaattcc tctacagtaa
    13861 ccaagatttc acggcgtttt gcatccaatt ccttgatgtc tgccaaggtt tcggcagcca
    13921 caccacgagt agctaatttg gcagccactc cgtcaaaatc tgtacgaata cgtttgatat
    13981 ctagcataga tgtctccttt agaataaaaa aacacagaat gagagatgct ggagcgatat
    14041 ttaccgcggt tccatccagc ttcacattct gtgcacttga ttgtattttg ataatttcat
    14101 aacggtagaa tttcacaact ttttcctatc tgctcacagc gaccgcagac tttctggaag
    14161 gagccagatg ctacttatcc gtttctacta ttatacttga atttttattt tttggcaaat
    14221 agattcgaaa tttttctgcc gattgtttgc ataagagtcg gtaatttcac aactttttca
    14281 ttgccaatat gctcacgagc aattttaaga atcttaccag aatctttaga tgcaaacaag
    14341 aatcgacttt tctctgtata aatttcaaaa tgacggctga ttgctttgcc agaaacgttt
    14401 gcgccaatgc tagtcatttc tgaccaagga atctggatat aacgctcaac gttgctatct
    14461 gggtagaatt caagtgcctt gtcaccaatt agaaatttac caaccttgcc accaaagccc
    14521 atgtaggaaa cccctgtggt ttgtagttca acgcttgtat tttgtgattg tgccatagtg
    14581 ctccctccct agatattcat tatatcataa aaccccgcaa gagcggggtc cttgattaca
    14641 taatgttgaa gaaacgagca agaataccta cgatgaagag accgataatc attgtgattg
    14701 gtgttacttt cttcttaagc aagtgcatgc agaggaaagt aaggagaagt cccatcaaac
    14761 caggaatcaa gctgtccaac tgaccttgta atgtttgagc ttgagttggt tcaaggctaa
    14821 gtccgctaag agcttgacca agaatacctt tcaactcagc accagtaaca gtaccttctg
    14881 ggaagacgat gtaagcacct tctgacaatt gtttagcagg aagatttaca gcgaaagtaa
    14941 tagataccca gcgttgaaca agaacggcaa ggatgaacat accaaggatt gaagcacctt
    15001 tagtgatgtc ttgaaggata ccaccagaca tgtctttagt gatttcgcta ccagctttgt
    15061 aaccaaattc ttgtgtgtac cataggaagg ccatacggat tgcgttccaa ccaaggaaga
    15121 agatgattgg tcccatgata ttcccagata gtgcaagtga agcaccaagg gcaccaagga
    15181 ttggacgaac agtaaaccag aagactgggt caccgatacc agcaagaggt cccatcatac
    15241 cgattttcac accttggata gctgtgtcat cgatttcagc accattagca cgctcttctt
    15301 caagggcaag agttacacca aggattggtg aagcaacgta tgggtgtgtg ttgaagaatt
    15361 ccaagtggcg ctcaagagca gcagcttgat cttctttttt agtgtaaagt tttttgatag
    15421 ctgggatcat tgcataagcc caacctaagt tttgcatacg ctcatagttc catgaacctt
    15481 gaaggaaggt tgaacgccac caaacttttt tacgatcgct tacggaaagt tgaatttttt
    15541 ctgacatgat gaatctccct tctcttagta gtcttcaagg atgtcgccga ttgggtcgtt
    15601 agatgaagca ccaccgttac ctgatccgcc ttgttttgac aagttgaggt agataagcgc
    15661 gattgcaaca ccgataacac caagtgcgat aagtgtcaat tggctgatag cagcaaaggc
    15721 aaaaccaagt gcgaagaatg gccatacctc acgagttgcc atcatgttga taaccatagc
    15781 ataacctacg gcaacaacca taccaccacc aacggccata ccacctgaca accaagctgg
    15841 cattgcttca agtactgatt gaacagcttc tgcaggaatt gcaagaagaa gagctgcagg
    15901 aactgcgata cgcaaacctt gaaggagaag agcaaacaag tggtaacgtt ctacagcagc
    15961 gaagtttgca tctttagcag cgttgtcagc accgtgtaca agaccgactg agatagtacg
    16021 aacgatcatt gtaaggaaaa gaccagctac ggcaagaggg atagcagttg ttgttgcaac
    16081 ggcaatacct tcagttgaga agtcgccacc tttgatcatg atgattgcag cagctacaga
    16141 agcaagagca gcgtcaggag caacagctgc accaatgttt gcccaaccaa gtgcaatcat
    16201 ttgtagagaa ccaccaagca taacacctgc agccaagtta ccagttacaa gaccgataag
    16261 ggtacaagct accaatggtt gatggaattg aaattcgtca aggatacctt caagacctgc
    16321 gaagaaggca acgatgacaa caagaattgc ggaaataagt gtaatatcca tgttgaaatc
    16381 ctttcttaaa tcagattgta ttattgaacg tttgccttgt tgatcaactc aaacaagtct
    16441 ttcttcgaat cgtttggtac tttacgcaca tcaaattcaa cgccaaggtc acgcaatttt
    16501 tcaaaggttg caacatcgtc tttgtccatt gacaatacgt tgttaaccat tgttttacca
    16561 gttgagtgag ccatagaacc aacgttcaat tctttgattt caacaccacc ttcaattgct
    16621 tcaagagctt cttgaggagt ttcgaaaaga atcaaggcgt gagtgttacc gaatcgaggg
    16681 tctttagaaa cctcaatcaa tttcttgatt gggacaacgt tcgcttttac gttaccaggt
    16741 gcagcttgtt tgatgagttg tttacgcaat tcatctttgg caactgtatc tgatgcaacg
    16801 atgatacgat ctgctttgga agcaggagtc caaccagtcg ccacttgacc gtgcaagaga
    16861 cgagtgtcga tacgggctaa gttgattttc aacttgccat caccgataac agtacctgga
    16921 gggatagcac cttgtagtgc aacaggagca gcatcggcaa caggagtagc ttcagctggt
    16981 tgaagttctt ctggaagaac tttgatacca tctttggctt ccttgataat gtttgccgca
    17041 acttcctcca cgccagcagc agcgttaatc atacgctctg tgtaagcttg gataagcatt
    17101 ggcaagttta gaccggtgat gatagcaaac ttacgatctg gattttcacc agctacacgg
    17161 cttgcttggt tgaatggtga accactccaa aggtcagcca aaaccaaaac ttcatcatcg
    17221 gcatcgaatg cgtccacggc agcatttagc ttagcgtata aatcatctgg accttcactt
    17281 ggcataaaag taacaacttg tactttttct tgttcgccaa agatcattga acctgactga
    17341 tgaataccag cagcaaattc gccatgactt gcaataatga ttccaatact cattattgat
    17401 cctcctaaat ttttcttgtt catgtaaaaa ccattgaatg ggctttcatg ttcgaactgt
    17461 aacattataa aacgttttca gtgcatttgt caagaggaat tatgttaaaa gtgcaaaata
    17521 tttccgaaat ttttcataag ttggtttcag aaaagtgata aaaatatgca acgaatatga
    17581 caaaaacctg acagtttatc aggttttttg atgtctataa aaataggttt tctagttcac
    17641 gtgcgacacc atcttcaaaa ttagcaaatg ctgtcaatct gtcggcatgt ggacgaagtg
    17701 tatcgctaca atttttcatg gcataggctg ttcctgctag gtctagcatc tcaacatcgt
    17761 tgtgctcatc gccgaaggca attaagtcgc taggagtggc ttggtagagg ttaagaacat
    17821 agctcagagc agttgcctta ttgacacctt ttgcacaagt ttcgaggata tttaatggtc
    17881 caccccacgt attgatttct aattcatctt tgaaataggc attcatttct tttgcaagtt
    17941 catacttatc agttgcacga gtttgcataa ggatggaatg agggtcacta gtgattaatt
    18001 caggtttgat gagtgtatct ggagtaatct gttcaacccc catcagagca ggatcaatct
    18061 tatctaagtt tttttgagtg atgtagaatt tattcttgta ttcaccagca ataaaatctg
    18121 cctcgaatgt ttcttcttct tttagaaatt cgagtaggta ttttttgtcg attaaaatat
    18181 tttgttccca ttgccatttc tttccaggga tgtgaactaa agaaccgttg aaattaatca
    18241 tgggagtatc cagttctagt tgttggtaaa atttttcagc cattcgatag gggcgacctg
    18301 tggcgataag aacggtgtgt cctgcttggc ggaccttctt tatagttgag atggtataat
    18361 cagataattg gctatcatta ttgagcaatg tgccgtccaa atcgatagct atgatttttt
    18421 tcttcatatt taatagcatt cctttctaga gtt
//
LOCUS       DBNFCX010000041        17956 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.041, whole genome shotgun sequence.
ACCESSION   DBNFCX010000041 DBNFCX010000000
VERSION     DBNFCX010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 17956)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17956)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17956
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.041"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..785)
                     /locus_tag="AC1PJC_001240"
     CDS             complement(<1..785)
                     /locus_tag="AC1PJC_001240"
                     /inference="COORDINATES: protein motif:HMM:NF024565.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HIP6620228.1"
                     /translation="MIDKLANISKKSFHNFSFHENLRECNIFFGTNGSGKSSLSNWIS
                     ENHESVKRFDTDYILDNIYTVDSLSGIKLLVGANRIGIEEAIENIKNANLNLVQYNQY
                     IDKRIEDYKNEVFEFMTYNLSEARELFKMTRQINQKRNAKINPIDALKAWENDIIDAD
                     FSKINSSDSIELELTNLRKEKSEITFDTNRKIDIILTEIQNIFTQKIIKPDFQITKDL
                     SEWLKEGLHLHNDGINECKFCGNHFDYEKVHDGILEKIQSQYS"
     gene            complement(870..3521)
                     /locus_tag="AC1PJC_001241"
     CDS             complement(870..3521)
                     /locus_tag="AC1PJC_001241"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018381174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HIP6620229.1"
                     /translation="MSKELSPKYNPAEVEAGRYQTWLDQDVFKPSGDAEAKPYSIVIP
                     PPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLREQG
                     VTRYDLGREKFLDKVWEWKDEYAATIREQWGKLGLSLDYQRDRFTLDEGLSKAVRKVF
                     VELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQVAT
                     TRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIVNKPIPIVADEHADPEFGTGVVKIT
                     PAHDPNDFLVGQRHNLPQVNVMNDDGTMNELAGEFAGMDRFEARKATVAKLQELGALV
                     EIENRVHSVGHSERTGVVVEPRLSTQWFVKMDQLAKNAIANQDTADKVEFYPPRFNDT
                     FLQWMENVHDWVISRQLWWGHQIPAWYNESGEMYVGEEAPAGDGWVQDEDVLDTWFSS
                     ALWPFSTMGWPDENAADFQRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFKNVL
                     IHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDA
                     SWNFINKIWNISRYILMNNEGLTLDAARENVTKVAAGEAGNVTDRWILHNLNETIAKV
                     TENFDKFEFGVAGHILYNFIWEEFANWYVELTKEVLYRDNEAEKVMTRSVLLYTLDQI
                     LRLLHPIMPFVTEEIFAQYAEGSIVVAAYPVVNPAFENAEAHKGVESLKDLIRSVRNS
                     RAEVNVAPSKPITILIKTADTELEAFFKANENYIRRFTNPEQLEISSSIAAPELAMSA
                     VITGAEIFLPLADLLNVEEELARLDKELAKWQKELDMVGKKLSNERFIANAKPEVVEK
                     EKEKQADYQAKYDATVARIEEMKKLGK"
     gene            complement(3694..4125)
                     /locus_tag="AC1PJC_001242"
     CDS             complement(3694..4125)
                     /locus_tag="AC1PJC_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620230.1"
                     /translation="MKSLTQTFTKKQKLVVVIVVILSVAIGFWKWRDSFFNTYYPDDT
                     SIQGQLFPNVANTKIETVENVLPFSDVKYDKIIIRIGSLSSEYDDSNQSSKANNIINR
                     KTLDENFIQWLIEAFDEEEAKKISDHIEVYYRGEIISEISY"
     gene            complement(4122..4895)
                     /locus_tag="AC1PJC_001243"
     CDS             complement(4122..4895)
                     /locus_tag="AC1PJC_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620231.1"
                     /translation="MKMLNKFTENSKDLRNELTSWFVIISLAFLLFLSIPWLVQKTLY
                     FTLSKPFEAQRVAITKSNKTSDTASGVEGTYINNIPFNDFEKLMNFSNVSFKSVDIQI
                     PRIYITSPIFNTSEYGDQLQDIWIDSLNKDELEEEFGSYKVYYDGNLIIENGASYTSE
                     GATKNQIISMKETIVTELDTNKEFKKYTFKKYYIPDEGTDPTEIKIIEDGFAIETVFE
                     QKDLIPNIAFGPTLYTVRAEFIKENNKLVLRKGSMEVYE"
     gene            complement(5059..5634)
                     /locus_tag="AC1PJC_001244"
     CDS             complement(5059..5634)
                     /locus_tag="AC1PJC_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HIP6620232.1"
                     /translation="MNLIIIGAQASGKMTVGQEVAKLTGMTLFHNHDSIDFSLRFIPE
                     FSEDMFDLNTRITFAVYDVFARSGRPLIGTALINFKNLIEVQFLTTVQTIFHYHGQEI
                     LFVELETALEERLRRNRTENRLTHKPLKRHIEVSEAEILSTADTCQYTSLGIPEGIQH
                     YLKINNTHLTANEVAQLIIKKMEELEQKQTK"
     gene            complement(5631..6020)
                     /locus_tag="AC1PJC_001245"
     CDS             complement(5631..6020)
                     /locus_tag="AC1PJC_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HIP6620233.1"
                     /translation="MLHHVEIYVSDLETSRAFYDFLLTKLGYSLYQEWDKGLSYKKAE
                     QYLVFVQTPQDFLEAGYHRCRIGLNHLAFHAGTPDEIDQWRKEFLTRRVKLLYDDRYP
                     HAGGSDHYALYLEDPDGIKIELVGEGV"
     gene            complement(6262..6648)
                     /locus_tag="AC1PJC_001246"
     CDS             complement(6262..6648)
                     /locus_tag="AC1PJC_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HIP6620234.1"
                     /translation="MGKKKVNRKKQLKKQLADLKRAGRVGLERAAEVVETVAYKAEAV
                     VEHAVEQVKEVVAEVTSSAISLEDFLALPELEGIAAARLETFYEAGIQSVADFANHTE
                     KELLALKGIGPATIKQLKEKGIELKA"
     gene            complement(6669..6923)
                     /locus_tag="AC1PJC_001247"
     CDS             complement(6669..6923)
                     /locus_tag="AC1PJC_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002263678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1912 family protein"
                     /protein_id="HIP6620235.1"
                     /translation="MTKEQEFLKEFEAWVNTQVMVNEMAVEESRRVLEEDKDERAADA
                     YIRYESKLDAYRFIQGKFANYHAGKGFHDLPDELFGQRHY"
     gene            complement(7033..8034)
                     /locus_tag="AC1PJC_001248"
     CDS             complement(7033..8034)
                     /locus_tag="AC1PJC_001248"
                     /EC_number="5.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016857 - racemase and epimerase activity,
                     acting on carbohydrates and derivatives [Evidence IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldose epimerase family protein"
                     /protein_id="HIP6620236.1"
                     /translation="MIEVKTFGEKAKLYCLENKNGMQVTLTDFGARVVGVFLPVEENG
                     GLRNVSLVAKSDDDYRKTDLYPGSTIVPVAGRISGAQAEIEGTSYHFTENEPGRTLHG
                     GVDTANEQYWDVELDHERNQVTFGMVLKDGFNGFPGDVRVKAIYCLTDKNELTVDYQA
                     VSDKDTIFNPTNHIYFNLTGDFQRSVAEHRIKIAANHYAPLGEDNLPTGVLEDVTGTP
                     FDFRDFAPFAQGFDSQYPQNVLVKGYDHPWLLEEVDIPVEVLSPDGKIGLSVKTNQPA
                     VVIYTYNFPVQALACYHGVFSMECQALPNACNVDGFGSILLEQGEEFLSKTTYRFTW"
     gene            complement(8214..8615)
                     /locus_tag="AC1PJC_001249"
     CDS             complement(8214..8615)
                     /locus_tag="AC1PJC_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HIP6620237.1"
                     /translation="MTRSLVLVSHGIFCEELKKSTEMIMGPQEDIYTVALLPEEGPED
                     FQKKFEETIAGLEDFVVFADLLGGTPANVVSRKLIEGGQFDLYAGMNMPMVIGFLNGV
                     LLGEAVDYVEFGTSNLVHVNSLLTSDEDDDE"
     gene            complement(8615..9433)
                     /locus_tag="AC1PJC_001250"
     CDS             complement(8615..9433)
                     /locus_tag="AC1PJC_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HIP6620238.1"
                     /translation="MTKSNYKLTKEDFNQINKRSLFTFQLGWNYERMQASGYLYMILP
                     QLRKMYGDGTPELKEMMKLHTQFFNTSPFFHTIITGIDLALEESDGVASKDAVNGVKT
                     GLMGPFAPIGDSIFGSLVPAIMGTVAATMGKEGSPVGIFLWVAVAIAYDIFRWKQLEV
                     AYKEGTKLITTMRDRLTALVDAASVMGVFMMGALIATMINFEVTWAPAIGEKVIDIQD
                     ILNTIFPRLVPAIFTGFIFWLLGRRGMTSTKAILIIIVLALGFSAIGHFLFGMV"
     gene            complement(9420..10322)
                     /locus_tag="AC1PJC_001251"
     CDS             complement(9420..10322)
                     /locus_tag="AC1PJC_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS
                     mannose/fructose/sorbose/N-acetylgalactosamine transporter
                     subunit IIC"
                     /protein_id="HIP6620239.1"
                     /translation="MMQWWQILLLTLYSAYQICDELTIVSSAGSPVFAGFITGLIMGK
                     MEVGLLIGASLQLVVLGVGTFGGASRIDATSGAVLATAFSISQGLDPEIAISTIGVPV
                     AGLLVYTDILGRFTTTFFAHRVDAAIERFDYAGIERNYLLGAIPWALSRALPVFLALA
                     FGGGLVETLVTTIELPEYKWIAAGLTLAARMLPGLGFAILLHYLPLKRNLHYLAVGFA
                     LTAMLTVLYGNVSALGGAVAGIVGTLPEDAGVSFVNNFKGLSMIGIAIVGAFLSVIHF
                     KNSQKVTVVAPSNSESGEIEDDEI"
     gene            complement(10361..10846)
                     /locus_tag="AC1PJC_001252"
     CDS             complement(10361..10846)
                     /locus_tag="AC1PJC_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system
                     mannose/fructose/N-acetylgalactosamine-transporter subunit
                     IIB"
                     /protein_id="HIP6620240.1"
                     /translation="MAIIATRIDGRLIHGQVANLWTTKLNIGRIMVIDDAVAQNDIEK
                     QGLKLACPPGVKLSILPIEKAANNIKEGKYDSQRLLIVARRPENFLRLVEYGVELPEL
                     NVGNMSQTPETRSVTRSINVVDKDIADFDALAAKGVKLFAQMVPGDSPKDFMPLLDKV
                     R"
     gene            complement(10900..12672)
                     /locus_tag="AC1PJC_001253"
     CDS             complement(10900..12672)
                     /locus_tag="AC1PJC_001253"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004565 - beta-galactosidase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 35 protein"
                     /protein_id="HIP6620241.1"
                     /translation="MKEFYIGDQFYLDGEPFKILSGAIHYFRVHPDDWYHSLYNLKAL
                     GFNTVETYVPWNMHEPRKGEFCYEGILDIERFLKLAQELGLYAIVRPSPYICAEWEWG
                     GLPAWLMKEELRVRSSDSVYLQHLDEYYASLIPKLAKLQLAQGGNVLMFQVENEYGSY
                     GEEKEYLRSVAGLMRKHGLTAPLFTSDGSWRATLRAGTLIEDDVFVTGNFGSKARENF
                     ANMTAFFNEHQKNWPLMCMEFWDGWFNRWGDEIIRREPEEMVDSVMECIELGSLNLYM
                     FHGGTNFGFMNGCSARGQIDLPQVTSYDYDAILDEAGNPTKKFYILQQRLKEVYPELE
                     YAEPLVKEAKAFSDVSLHDKVSLFATIENVSGCVKGFYPKNMEELDQSTGYILYRTEL
                     ERDKTEAERFRVVDARDRIQIYADGKFVATQYQTEIGDDVELDFKDDKLTLDILVENM
                     GRVNYGHKLTAPTQSKGLGRGAMADLHFIGHWETYPLPLDSVEDLDFSKGWEEGQAAF
                     YRYQFELDELADTYLDMTGFGKGVVFVNNVNIGRFWEKGPILYLYIPKGYLKKGANEI
                     VVFETEGKYREKIHFSQRPVIKDL"
     gene            12895..13605
                     /locus_tag="AC1PJC_001254"
     CDS             12895..13605
                     /locus_tag="AC1PJC_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIP6620242.1"
                     /translation="MKVPKYQLIQNDLRQQIISGKFENGDKFYTESELTKLFNVSSIT
                     VIRAVNELVKDGYLVRQQGKGTFVSRSRKGRLVEFSDIEIFPMDKDKVTVLSCEKGNK
                     PDILEKLNLDKNEFYYKIVRVRAAEDTPYIFHNSYIPQRYIQNPDAPLEHYQSIYQRF
                     KLDYNIHMSEEPFVETNEIVSPCPKEVATHLKLKATEPAVLQNKTTTNSTSGEVMEYT
                     ETYKHWKYYKFEITANHR"
     gene            complement(13749..14480)
                     /locus_tag="AC1PJC_001255"
     CDS             complement(13749..14480)
                     /locus_tag="AC1PJC_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIP6620243.1"
                     /translation="MVSQTVEKPLYLQLVDELEVAIRERMAPNDKLFSERELTQVYGV
                     SRITVRLALQELEKRGLVYKKHGKGTYVSEISDTAVDLSQAYSFTEQMKKIGKVPRTS
                     ILSFELVKASDYIAQHLQLSQGEEVFEVERLRLADEVPMMLERTYVPASLFPGLAAQR
                     MKSTPLYEIFSEDYHQVIRLAEEEFYASIALDNEAKILGIPSNSPVLHLVRKTYNDKN
                     RIIEFTFSIARADQFRYKITHQRGY"
     gene            complement(14580..14897)
                     /locus_tag="AC1PJC_001256"
     CDS             complement(14580..14897)
                     /locus_tag="AC1PJC_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF960 domain-containing protein"
                     /protein_id="HIP6620244.1"
                     /translation="MAFEQTNGRYASFGVVTSLPGEVIDSFWYVIDHYLKGVIPLKSV
                     IRFSIKNRRGKITLVFSQEGYKNVLAVDLSSRFDPFYPSTILVMDKQGKETITLPDEV
                     TLL"
     gene            complement(14955..15488)
                     /gene="ntdP"
                     /locus_tag="AC1PJC_001257"
     CDS             complement(14955..15488)
                     /gene="ntdP"
                     /locus_tag="AC1PJC_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000775318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017110 - nucleoside diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_function: GO:0017111 - ribonucleoside triphosphate
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside tri-diphosphate phosphatase"
                     /protein_id="HIP6620245.1"
                     /translation="MKLPKEGDFITIQSYKHDGEIHRTWRDTMVLKTTENAIIGVNNH
                     TLVTENDGRRWVTREPAIVYFHKKYWFNIIAMIRENGVSYYCNLASPYVLDNEALKYI
                     DYDLDVKVFADGEKRLLDVDEYERHRKAMKYSDDIDFILKENVKILVDWINNQRGPFS
                     PAYVNIWYKRYLELRSR"
     gene            complement(15564..16340)
                     /gene="recX"
                     /locus_tag="AC1PJC_001258"
     CDS             complement(15564..16340)
                     /gene="recX"
                     /locus_tag="AC1PJC_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HIP6620246.1"
                     /translation="MRITKIEKKKRLYLLEVDGQDSLYITEDTIVRFMLSKGKEITEQ
                     EFRELRDFAQFSYGKNLALYYLSFKQRTKKEVSDYLKKYEIEENNIVKIVTVLEEEKW
                     LDDGNYIDSYVRQNALNGDKGPAMIRQKLMQKGIPKPLIDKRLAEEDFSELAGKIGEK
                     LVGRYQRKLPLRALQDKVVQGLMGKGFSYETAKQSLGQLELVADEENEDDLIAKELDK
                     QYRKYSRKYEGYELKQRLIQALARKGYDFDRIQTVLRDYL"
     gene            16378..17730
                     /gene="rlmD"
                     /locus_tag="AC1PJC_001259"
     CDS             16378..17730
                     /gene="rlmD"
                     /locus_tag="AC1PJC_001259"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HIP6620247.1"
                     /translation="MNLQVNQRIPLKIKRMGINGEGIGFYQKTLVFVPGALKGEEIFC
                     QITSVKRNFVEAKLLKINKESKFRVKPACDIYQACGGCQIMHLRYDKQLDFKQDLLQQ
                     ALKKFKPAGYENYTIYPTIGMDKPSHYRAKLQFQTRSFKDQVKAGLYAENSHRLIGIT
                     NCYVQDAETQEIINGIAKLLTKHRIPIYNERKQHGIRTVMVRKARKTGQVQVIFITSC
                     QVNLIKLIDELTSQFPSIITIALNWNRQKTSDIYGEKTEILWGEQAIDEAVLDYEFSL
                     SPRAFYQLNPQQTEILYGEAVKALDISGDEDLIDAYCGVGTIGFAFAKKVKSVRGMDI
                     IPEAIEDAKANAKRMGLSNTHYEAGKAEEIIPKWYQEGYRADALVVDPPRTGLDEKLL
                     KTILDYKPAKMVYVSCNVSTLARDLVELSKAYKVEYIQSVDMFPHTARTEAVVKLSKK
                     "
BASE COUNT         5374 a         4120 c         3118 g         5344 t
ORIGIN      
        1 tgagaatatt gagattgaat cttttctaga ataccatcat gaactttttc ataatcaaaa
       61 tgattaccac aaaacttaca ttcgtttata ccatcattat gtaaatgtaa cccttccttt
      121 aaccattcag ataaatcttt tgtaatttga aaatctggct taattatttt ctgtgtgaat
      181 atattttgaa tttcagttag aataatatct atttttctat tcgtatcaaa tgtaatttca
      241 cttttttctt ttcttagatt ggttaattcc aactcaattg aatcactaga atttattttt
      301 gaaaaatctg catcaataat gtcattttcc catgctttga gagcatcaat tggatttatc
      361 tttgcatttc gcttttgatt aatttgtcga gtcattttaa aaagttcacg agcttctgaa
      421 agattataag tcataaactc aaatacttca ttcttataat cttcaatccg cttatctatg
      481 tactgattat actgaactaa attgaggttt gcatttttga tattttcaat tgcttcttca
      541 ataccaattc tattagcacc aactaatagt ttgattccag atagtgaatc aactgtataa
      601 atattgtcta atatgtaatc cgtatcaaat ctttttactg actcatgatt ttctgaaatc
      661 cagtttgaca atgacgattt accactccca tttgttccaa aaaaaatatt gcattcacgc
      721 aagttttcat gaaacgaaaa attatgaaat gactttttag aaatatttgc caatttatct
      781 atcatactca ttatcctctt ataactaaat tacacttcat tataccaaaa aacgttagca
      841 tttgctaacg ttttcataat tattctatcc tacttcccca actttttcat ctcttcaatc
      901 cgcgctactg tcgcatcata ttttgcttgg tagtcggctt gtttttcttt ttctttttca
      961 acgacttctg gtttggcgtt ggcgatgaag cgttcgttgc tgagtttttt gccgaccatg
     1021 tctagttctt tttgccactt ggcaagttct ttgtctagac gagccaactc ctcttctacg
     1081 ttaaggaggt cggctagtgg caagaagatt tcagcaccgg tgataacggc tgacatggct
     1141 agttctggtg ctgcaatact tgagctgatt tccaactgtt ctggatttgt aaagcggcgg
     1201 atgtagtttt catttgcctt gaagaaggct tcaagctcag tatccgctgt cttaatcaag
     1261 atagtaatcg gcttagatgg agcaacattc acttctgctc tgctatttcg caccgaacga
     1321 atcaaatcct tgaggctttc cactcccttg tgagcttcag cgttttcaaa ggctgggttg
     1381 acaacagggt aggccgccac cacgattgag ccttctgcgt actgggcgaa gatttcttcc
     1441 gtcacaaacg gcatgattgg gtggaggagg cgaaggattt ggtccagcgt gtagagaagg
     1501 acagagcggg tcatgacttt ctcagcctcg ttgtcacggt aaagcacttc cttggtcagc
     1561 tccacatacc agttggcgaa ctcttcccag atgaagttgt agaggatgtg accagccaca
     1621 ccgaactcga acttgtcgaa gttttcagtg accttggcaa tggtttcgtt gaggttgtgg
     1681 agaatccagc ggtccgtcac gttgccagcc tcaccagctg cgactttggt aacattctca
     1741 cgcgccgcat ccaaggtcaa gccttcattg ttcatgagga tgtagcggga aatgttccaa
     1801 atcttgttga tgaagttcca agaagcatcc atcttctcat aagagaagcg gacatcctga
     1861 ccaggagcag agccgtttga caggaaccaa cgcaaagcgt ccgcaccgta tttctcgatg
     1921 acatccattg ggtcaatccc gtttccgagc gacttggaca tcttgcgacc ttcttcgtcg
     1981 cggatcaaac cgtggatcag cacgttcttg aatggctgac ggccggtgaa ctcaagcgat
     2041 tggaaaatca tgcgtgacac ccagaagaag atgatgtcgt agcctgttac caaggttgaa
     2101 gttgggaagt aacgctggaa gtccgccgca ttttcgtcag gccagcccat agttgagaat
     2161 ggccaaaggg cagagctgaa ccaggtgtct aggacatcct catcctgtac ccatccgtca
     2221 cctgctggag cctcttctcc gacgtacatt tcgccagatt cgttatacca tgctggaatc
     2281 tgatgacccc accaaagctg acgcgagata acccagtcgt gtacattttc catccattgt
     2341 aggaaggtat cgttgaagcg tggtgggtaa aattctacct tgtcagcggt gtcttggttg
     2401 gcaatggcat tcttcgccag ttggtccatt ttgacaaacc attgagttga caagcgtggc
     2461 tcgactacca cacctgtacg ctcagagtgt ccaacggaat gcacacggtt ttcgatttca
     2521 acaagggcac ccagctcttg caacttcgca actgttgcct tacgagcttc aaaacggtcc
     2581 atacctgcaa attcacctgc caactcgttc atggtaccgt cgtcattcat aacgttgact
     2641 tgtggcagat tatggcgttg tccaacgagg aagtcatttg gatcgtgggc aggtgtgatt
     2701 ttcacaactc ccgtaccaaa ttcaggatct gcatgctcat ccgcaacgat tgggattggc
     2761 ttgttgacga ttggcaggat aacatttttg ccaatcaagt ccttgtaacg tgggtcttct
     2821 gggttaaccg ccaccgcaac gtcaccgaac atggtttcag gacgagttgt cgcaacttga
     2881 agagcacgag aaccatcttc caacatgtaa ttcatgtggt agaaggcacc ttcgacatct
     2941 ttgtgaataa cttcgatatc agaaagggct gtgcgagctg cagggtccca gttgatgata
     3001 aattcgccac ggtagatcca gccttttttg tagagttcta caaagacctt gcgaacggct
     3061 ttcgacaagc cttcatccag cgtgaagcgg tcacgttggt agtccaaaga cagacccaac
     3121 ttaccccatt gctcacgaat ggtcgctgcg tactcatcct tccattccca gactttgtcg
     3181 aggaactttt cacgacccaa gtcataacgg gtcacgcctt gctcacgcaa gcgttcctca
     3241 accttagcct gagtagcaat ccccgcgtgg tccatacctg gaagccagag ggtgtcaaag
     3301 ccctgcatgc gcttttggcg gataataata tcttgaaggg tggtatccca agcgtgcccc
     3361 aggtgcaact tacctgttac gtttggtggc ggaatgacga ttgaataggg cttagcctcc
     3421 gcatcgcctg acggcttaaa gacatcttgg tccaaccaag tttggtaacg accagcctca
     3481 acctcggctg gattatattt tggtgataat tcttttgaca ttaatttttc tcctttagta
     3541 ttctttaaga aaattggttt atactatcct caagctagaa atagcccaat tctttttcat
     3601 ataatctcct agaaatagtc agtcctttgg gctggctatt tcgtttttca ttcttgaacc
     3661 ctgcatctac ggacgagaga ggtttgtgta acgttaataa ctaatttcgc ttattatttc
     3721 gccacgatag tacacttcga tatgatcaga tattttttta gcttcctctt catcaaatgc
     3781 ttctatgagc cattgtatga aattttcgtc taatgttttt ctgtttatga tattatttgc
     3841 tttcgatgat tgattagaat catcgtattc tgaagacagg ctaccaattc tgataattat
     3901 cttatcatat ttcacatctg aaaatggcaa aacattctca acggtttcaa tcttcgtgtt
     3961 tgcaacattg ggaaacaact gcccttggat tgaagtatcg tcaggataat aggtattgaa
     4021 aaaactgtca cgccatttcc aaaaacctat tgctacggat agtatcacta caatcaccac
     4081 tactaatttt tgtttcttgg tgaaggtttg tgtcaaactt ttcattcgta tacctccatg
     4141 ctccccttcc tcaataccag tttattgttt tcctttataa actccgctct cactgtgtac
     4201 agagtaggac caaaagcaat attagggatc aaatcttttt gttcaaacac cgtttcaata
     4261 gcaaatccat cttctataat cttaatttct gttggatctg taccctcgtc tgggatataa
     4321 tattttttaa atgtgtattt tttgaattcc ttgtttgtat ctaattcagt gacaatcgtt
     4381 tctttcatcg atattatttg atttttagta gcaccctcgc ttgtatagga tgcaccattt
     4441 tcaataatca aattaccatc atagtaaact ttgtaggaac cgaattcctc ttcaagttca
     4501 tccttattta aagagtctat ccaaatatct tgtaattggt ccccatattc tgaagtatta
     4561 aaaatgggac tcgtaatata aattcttggt atttgaatat caacactttt gaaagacaca
     4621 ttgctaaaat tcatcaattt ttcaaaatca ttaaagggaa tattattgat gtaggtccct
     4681 tcaactccag aggcagtatc tgaagttttg tttgattttg tgatggctac tctttgtgct
     4741 tcaaatggtt ttgataaagt aaaatataaa gtcttttgca ccaaccaagg aatgctcaag
     4801 aataataaga aggctagcga aatgatgaca aaccagctag tcaactcatt tctcaaatct
     4861 tttgaattct ctgtgaactt gtttaacatt ttcatagaca gtatactcct aattcatatt
     4921 ttaatacact gcacgcaaaa tagtatgctc catgagataa gcatgatgta atatagtagc
     4981 aggactgaac tgatagtact aatagaaata gtttatgcct atctggatta tattctgttt
     5041 cgcccctcaa cggaaaggct atttcgtttg tttttgttca agttcctcca tttttttgat
     5101 aatcagttga gcaacttcat tagcagtaag gtgagtatta ttaattttga gataatgctg
     5161 aatgccctct ggaatgccta atgaggtata ttgacatgta tcagctgtag agagaatctc
     5221 agcctctgaa acttcaatgt gtcgtttcaa aggtttatgg gtcagtcgat tctctgtccg
     5281 attacgccgc agacgttctt ccaaagcagt ctccaactca acaaataaaa tttcctgacc
     5341 atgataatga aaaatcgtct gaacagttgt aaggaattga acctctatga gatttttaaa
     5401 attaatcaag gcagttccaa ttagtgggcg gcctgaccta gcaaacacat cataaacagc
     5461 aaatgtaata cgtgtattga ggtcaaacat atcctcagaa aattcaggaa taaaacgtag
     5521 gctaaaatca atcgaatcgt gattatgaaa gagggtcatc cctgtcaatt tcgcaacttc
     5581 ctgcccaacg gtcatcttgc cagaagcttg tgctccaata ataattagat tcatactccc
     5641 tcccccacca actctatctt aatcccatct gggtcttcca aatagagggc atagtgatct
     5701 gatcctcctg cgtggggata gcggtcatcg tagagcagtt tgactcgtct ggtcaaaaat
     5761 tccttccgcc attggtcaat ctcatcaggt gttcccgcat gaaaggctag atgattgaga
     5821 cctatacggc aacggtgata acctgcctct aggaaatcct gtggcgtttg gacaaagacc
     5881 aggtactgct ctgctttttt ataagacagc cctttatccc actcctgata gagcgagtag
     5941 cccagcttgg tcaggagaaa gtcgtagaat gcccgtgagg tttccaagtc tgaaacatat
     6001 atttcaacat gatgtaacat atcttctcct ttccaaataa aaatccctgc ctagacttgc
     6061 tagacaggga cgaagttatt ccgcggtacc acccttgttc agataattta tctgcacttt
     6121 gcttattcga ttcacatcat cagcaaccag ttttgacatt tgtgcggatt tctcagtacc
     6181 accgcttcct gtgacaaatg gggctcaaaa cacctctgaa tggctttatt gtaacaaatt
     6241 gcaccttgaa aagcaaggga tttaagcttt caactcaatc cctttttctt tcaactgctt
     6301 gatagttgca ggaccgatgc ctttaagagc caagagctct ttttctgtat ggtttgcaaa
     6361 atcagccacg gattgaatac ctgcttcgta gaaggtttcc aaacgtgctg ccgcaatgcc
     6421 ttccaactca ggaagtgcca aaaagtcttc caatgaaatc gctgaagaag tcacctctgc
     6481 tacaacttct ttcacttgtt ccacagcatg ctctactaca gcctcagcct tgtaagcaac
     6541 tgtctctact acctctgcag ctctttcaag acctacacga cctgcacgtt tcaagtctgc
     6601 taattgtttt ttcaattgtt tttttcgatt tactttcttt tttcccattt ttcatctctc
     6661 ccgtctgatt aataatgcct ttgaccaaac aactcatctg gtaaatcatg aaaacctttg
     6721 ccagcatggt agttagcaaa tttcccttga atgaatcgat aggcatccag cttgctctca
     6781 taacgaatat aagcatccgc tgcacgctca tccttgtctt cttccaagac acgacgactt
     6841 tcttcaactg ccatctcatt taccatgacc tgagtgttga cccaagcctc aaattctttt
     6901 aaaaattctt gttcttttgt cattattttc ctctttcgcc tgcttcgatt gaaacacacc
     6961 ggtttattat accatatttt ctagaaaaca caagaaaacc ctaactgtaa cacagtcaga
     7021 gtccccattt ttttaccaag taaaacgata ggtcgtttta gacaaaaatt cttctccttg
     7081 ttctaacaaa atcgaaccaa atccatcgac attgcatgca tttggcagag cctgacactc
     7141 catactgaag acaccatggt aacaggccaa agcttgaaca ggaaaattat atgtatatat
     7201 aacgaccgca ggctggttgg ttttgacact gagtccaatt ttcccatctg gactcaaaac
     7261 ttctaccgga atatccacct cttccaataa ccacgggtgg tcatagcctt ttaccaacac
     7321 attttgagga tattggctat caaatccctg agcaaaaggc gcaaaatctc taaaatcaaa
     7381 cggcgtccct gtcacatctt ctaagacacc cgtgggcagg ttatcctccc caagcggagc
     7441 atagtgattg gcagcaattt taatacggtg ctcggcaact gaccgttgaa aatcaccagt
     7501 caagttgaaa tagatatggt tggtcggatt aaaaatcgta tccttatccg atacagcctg
     7561 gtagtcaact gtcaattcat ttttatccgt caaacaataa atagccttga ccctcacatc
     7621 accaggaaag ccattaaaac catcttttag gaccatacca aaggtcactt gatttctctc
     7681 atggtctagc tcaacgtccc agtactgctc atttgccgtg tcaaccccac cgtgtagagt
     7741 cctaccaggt tcattttctg tgaaatggta gcttgttccc tctatctcag cttgggcacc
     7801 tgaaatacgc cccgctactg ggacaatagt tgagccaggg tacaaatctg tcttgcggta
     7861 atcatcatcc gacttggcaa ctaaactgac attccgtaga ccgccatttt cttctactgg
     7921 caggaacact cccaccactc tagctccaaa atccgtcaag gttacctgca tcccattctt
     7981 gttttccaag caatacagtt ttgctttttc accaaatgtt tttacttcaa tcatttcttt
     8041 tcctcacaag ccaaatgagg gagtcactat tgcaactccc tcaggatact taaagcctat
     8101 caactataga acattttata attaacgaaa atcaaatccg tctgtaacaa tcggctgagt
     8161 tagcttcact ctcttatttc taggcttggg tcgaaaaact ccactggagt ttttcactca
     8221 tcgtcatctt catcacttgt taatagacta ttgacatgaa ctaggttgct tgtcccaaat
     8281 tctacataat ccacagcctc tcccagcagg acgccgttca agaagccgat aaccattggc
     8341 atgttcatac ctgcatagag gtcaaactgc ccaccttcaa tcaattttcg tgatacgacg
     8401 ttggctggtg taccgcccaa caagtctgcg aagacaacga aatcttccaa tcctgcaatt
     8461 gtttcttcaa attttttctg gaagtcttct ggaccttctt ctggtaataa agctactgtg
     8521 tagatgtcct cttgaggacc cataatcatt tcagtagatt ttttcaactc ctcgcagaag
     8581 ataccatgac ttactaatac taaacttcta gtcattatac cataccaaat aggaagtgac
     8641 cgattgctga gaagccaagt gcaagcacaa taataatcaa gatagcttta gtcgaagtca
     8701 tgccacgacg accaagaagc cagaagataa atcctgtaaa gattgcaggt actaggcgtg
     8761 ggaagatggt attcaaaatg tcttgaatat caatcacttt ttctccaata gctggggccc
     8821 aagtcacttc aaagttaatc atagttgcaa tcaaggcacc catcatgaag acacccatta
     8881 cagatgctgc atcaacgaga gctgtcaagc gatcgcgcat ggttgtaatc aacttagtac
     8941 cttctttata ggcaacttcc aactgtttcc aacggaagat gtcataggca atggctactg
     9001 ctacccaaag aaagatacca actggagatc cctctttacc catagtagca gccacagtcc
     9061 ccataatcgc tggaacaaga gaaccaaaga ttgagtcacc gattggagca aatggtccca
     9121 tcaaacctgt cttaacaccg ttaaccgcat ctttagaagc aacgccatca ctttcttcaa
     9181 gtgccaagtc aatacctgtg atgatggtat ggaagaatgg tgaagtattg aagaactgag
     9241 tatgcaattt catcatttcc ttcaactcag gagtaccatc tccatacatt ttacgcaatt
     9301 gtggcaaaat catgtagagg tagccagatg cctgcatccg ctcatagttc caaccaagtt
     9361 ggaaagtgaa caagctacgc ttgttgattt gattaaaatc ttcttttgtt aatttgtaat
     9421 tagatttcgt catcttcaat ttccccactt tctgaatttg atggagcaac cacagttact
     9481 ttttggctat ttttgaagtg aatcactgaa aggaatgcac ccacaatagc gataccaatc
     9541 attgacaaac ctttgaagtt attgacaaag cttacgcctg catcttcagg aagagtgcca
     9601 acgataccag caactgcacc acccaaagct gatacgttac cgtaaagaac agtcaacata
     9661 gctgtaagag cgaaacctac cgccaagtag tgaaggttac gtttaagtgg aagatagtga
     9721 agtaagattg caaatccaag acctggaagc atacgagctg caagagttaa gcctgctgca
     9781 atccatttgt attcaggcaa ctcaatcgta gtgacaagag tttctacaag accaccacca
     9841 aaagcaaggg caagaaaaac tggaagtgca cgagaaagtg cccaaggaat tgcaccaaga
     9901 aggtagttgc gttcaatacc agcatagtca aaacgttcga ttgctgcatc tacacgatga
     9961 gcaaagaaag tagtggtgaa acgacctaaa atatctgtat aaaccaacaa tcctgcaact
    10021 ggtacgccaa tagtggaaat ggcaatttct ggatctaaac cttgtgaaat tgagaaagct
    10081 gtcgcaagaa ccgcaccaga tgttgcatca atacgtgacg caccaccgaa agtaccaact
    10141 cccaagacaa ctagctgcaa acttgcacca attagcaagc caacttccat tttccccatg
    10201 attaaaccag tgataaaccc tgcaaagact ggtgaacctg ctgacgatac aattgtcagc
    10261 tcgtcacaaa tctggtaagc agagtagagc gttagaagta atatttgcca ccattgcata
    10321 atagtgatcc tcctttaaat ttttcaaaaa tatccgaatg ttatctaacc ttatccaata
    10381 atggcataaa gtcttttggt gaatcgccag gtaccatttg tgcaaataat tttacaccct
    10441 tagccgccaa ggcatcaaaa tctgcaatat ccttatctac aacgttaata gaacgagtta
    10501 cagaacgagt ttccggagtt tgagacatat tccctacgtt caactcaggg agctcaaccc
    10561 catactctac caagcgaagg aagttttctg gacgacgagc aacaatcaag agacgttgac
    10621 tatcatactt gccctcctta atattattag cagccttttc aatcggtaaa atcgataatt
    10681 ttacgcctgg aggacaggct aatttcagtc cttgtttttc aatgtcattt tgagcaacag
    10741 catcatcgat aaccatgata cgaccgatgt tcaatttcgt cgtccataag ttagcaacct
    10801 gaccgtgaat caaacgacca tcaatacgcg tagcaataat tgccatacag tgttctcctt
    10861 ttcttcataa atcttttgag cagaaaccga ttaaaatttc tacaagtctt ttataacggg
    10921 tctttgtgaa aaatgaatct tctctctata ttttccttct gtctcgaaga caactatttc
    10981 attcgctcct ttctttaagt atccttttgg aatatagaga tagaggattg gccctttttc
    11041 ccaaaaacgt ccaatattta cattattaac gaaaacaact cccttaccaa aaccagtcat
    11101 gtctaagtaa gtatccgcaa gttcatccag ttcaaactga taacgataga aagcagcttg
    11161 accttcctcc cagcccttac taaaatccag gtcctcaact gaatcaagag gcaaaggata
    11221 ggtttcccaa tgaccaataa aatgtaaatc agccatcgca cctcgaccaa gccctttaga
    11281 ctgggtagga gccgttagtt tgtgcccata attgacacgt cccatatttt ctaccaaaat
    11341 atctaatgtt agcttgtcat ctttaaaatc caattcaaca tcgtcaccaa tctctgtctg
    11401 atactgagtt gcaacgaatt ttccatctgc ataaatttgg atacggtcac gcgcatcaac
    11461 cactcggaaa cgttccgctt ctgtcttatc ccgctccaac tctgttctat ataaaatata
    11521 acctgttgac tgatcaagtt cttccatatt cttaggataa aaccctttta cgcaaccgct
    11581 tacattttct atagtagcaa atagactcac cttatcatgg agcgacacat ctgaaaaagc
    11641 ttttgcctct tttacaagcg gttctgcata ctctaattca ggatagactt ctttcaaacg
    11701 ttgttgcaaa atatagaact tcttagtagg atttccagct tcatccaata tagcatcata
    11761 atcataagaa gttacctgag gcaaatcaat ttgaccacga gcagagcaac cattcatgaa
    11821 accaaaattt gttccaccat ggaacatgta cagattcaag gagcccaatt cgatacattc
    11881 cataaccgaa tcaaccattt cttccggctc tctacgaata atttcatcgc cccaacgatt
    11941 gaaccaacca tcccaaaatt ccatacacat gagtggccaa ttcttctgat gttcattaaa
    12001 gaatgccgtc atatttgcaa aattctctct agctttagaa ccaaagtttc ctgttacaaa
    12061 tacatcgtcc tctatcagtg ttcctgcacg taatgttgct cgccaagaac cgtccgaggt
    12121 aaacaaggga gcagttagac catgtttacg catcaagcca gccaccgatc ttagatactc
    12181 cttctcctca ccataagagc catactcatt ttccacttgg aacataagta catttccacc
    12241 ctgtgcgagt tggagcttgg ccaatttagg aataagagaa gcgtaatatt catctaagtg
    12301 ctgcaagtac accgaatcac tcgaacgtac tctaagctct tccttcatca accaagcagg
    12361 gaggccaccc cattcccatt ccgcacaaat ataaggggaa ggacgtacaa ttgcataaag
    12421 ccctaattct tgagccaatt tcaaaaatcg ctcaatatcc aatataccct cgtaacaaaa
    12481 ctcacccttt cgaggttcat gcatattcca agggacatag gtttcaaccg tattaaaacc
    12541 aagggccttt aagttataca aagaatggta ccaatcatca ggatgaacac gaaaataatg
    12601 aatcgcgcct gataaaatct taaagggttc accgtccaaa taaaattggt ctccaatata
    12661 aaattctttc atttcttcct ccgatgcaac cgcttacctt tctattaata tactaacact
    12721 tatttgtggt tatgtccagt acttttttta aaaatttttt acttttttta caaacacctc
    12781 tatttcctta ctccgaaagg gattacatct atttttttta tggattccag ctatattttt
    12841 tgattttcat caattaattt agtataatga gtcatggaaa ggaaggaaat aagtatgaaa
    12901 gtacctaagt accagcttat acaaaacgac ttacgccagc aaattatctc tggcaaattt
    12961 gaaaatggcg acaaatttta cacagaatct gaattaacaa aactatttaa cgttagctct
    13021 atcaccgtta ttcgtgcagt aaacgaacta gttaaagacg gctacctcgt tcggcaacaa
    13081 ggtaaaggaa cctttgtatc ccgttcacgc aaaggacgtc ttgtagaatt ttctgatatt
    13141 gagatttttc cgatggataa ggataaggtt actgttctct cgtgcgaaaa aggcaataaa
    13201 cccgatatcc ttgaaaaact aaatcttgac aagaatgagt tttactataa aattgtacgc
    13261 gtccgcgcag cagaagacac tccatacatc ttccacaatt catatatccc tcaacgatat
    13321 atccagaatc ccgatgctcc actcgagcac tatcaatcaa tctatcaacg cttcaaactg
    13381 gactacaata tccacatgtc cgaggaacca tttgtagaaa cgaatgaaat tgtcagccca
    13441 tgtccaaaag aggttgccac tcatttgaaa ttaaaagcga ctgaaccagc tgtactacaa
    13501 aacaaaacaa ctactaacag tactagcggt gaagtgatgg aatatactga aacttacaaa
    13561 cactggaagt attacaaatt tgaaattaca gccaatcatc gctaaaaaaa aaacgcagac
    13621 taacgtccgc gttttttttc atacccaata gcaatcaaaa gtagcctggg aaacgaaacc
    13681 aaagatagaa ctggatttca tcaaggctct tgacaacgaa taattttgat tttcgaagag
    13741 tattgattct aatatccccg ttgatgggta atcttgtaac gaaactggtc cgctctagca
    13801 atactaaacg taaactcgat aattctattc ttatcattat acgtttttct taccaaatga
    13861 agcactggac tattgcttgg aattccgagt atcttagctt cattatccaa agcaatactt
    13921 gcatagaact cttcttctgc caaacgaatc acctgatgat aatcctctga aaaaatttca
    13981 tacaaggggg ttgacttcat tcgctgagca gctaatccag gaaatagcga ggcaggaaca
    14041 tatgtccttt ccaacatcat cggaacctca tctgcaagtc tcaaacgttc aacttcaaac
    14101 acttcctcac cctgactaag ttgtagatgc tgcgcaatat agtccgacgc cttaaccaat
    14161 tcaaaggata aaatcgatgt ccttggtact ttcccaattt ttttcatttg ctcagtaaaa
    14221 ctataggcct gagacaaatc aactgcagta tctgaaatct cagatacata ggttccctta
    14281 ccatgcttct tatagactaa accacgtttt tccaattctt gcaaagccaa acgaactgta
    14341 atacgactga caccataaac ctgtgtcaac tcacgctctg aaaataactt gtcattcgga
    14401 gccatcctct cacgaattgc aacttccaat tcatcaacca actgcaaata gagaggtttt
    14461 tcaacagttt gactaaccat agactcctcc tttctaaccc acataagctt acaaatctat
    14521 tttacaccaa atttcatata ttaacaatat cttaggtgat aaaataccag ctcttcaagc
    14581 taaagcaagg tcacctcatc tggcaaagta atggtctctt ttccctgctt gtccattacc
    14641 aggattgttg agggataaaa aggatcaaaa cggctactta gatctacagc cagtacattt
    14701 ttataacctt cctgcgaaaa gaccagcgta atcttaccac gacgattttt gatagaaaaa
    14761 cgaattacac tttttaacgg aataacccct tttaagtagt gatcaataac ataccagaaa
    14821 ctatcaatca cttccccagg aagcgaggtc acaactccaa aacttgcata gcgcccattt
    14881 gtttgttcaa aggccataag cccctccttt acaataagaa aaaagcctgt aaaacaggat
    14941 tttcttttct aactttatct acttctcagt tctaaatagc gtttgtacca gatattaacg
    15001 taggctggag agaatggtcc gcgctggtta ttaatccaat caaccagtat cttgacattt
    15061 tccttcaaaa taaaatcaat atcatccgaa tacttcatcg ccttacgatg acgctcatat
    15121 tcatccacat ccagcagtct cttttcacca tcagcaaaga ccttaacatc taggtcataa
    15181 tcaatgtatt tgagtgcctc attgtcgaga acatatggac tagcaaggtt acaataatag
    15241 gaaactccgt tttcacgaat cattgcaatg atattgaacc agtatttttt atgaaaataa
    15301 acgattgctg gttctcttgt tacccaacgc ctaccatcat tttcagtcac taaggtatga
    15361 ttattgactc caataatagc attttccgtt gtttttaata ccatggtgtc acgccaagtg
    15421 cgatgaattt caccgtcatg cttataactt tgaattgtaa taaagtcgcc ttcctttggt
    15481 aatttcactt tgttaccaac tttctacaat tacaatttat cttgactatt atatcatatt
    15541 tttctaacct aggctaaatt ttttcacaga taatcacgaa ggacagtctg aatccgatca
    15601 aagtcataac cctttcgagc caaagcctgt atcaaccttt gcttcaattc gtagccttca
    15661 tatttacgac tatattttct atactgctta tccaattcct tggcgattaa atcatcttca
    15721 ttttcctcat cagccacaag ttccaactga cccagacttt gtttagccgt ctcataagaa
    15781 aaacccttcc ccatcaatcc ctgtacaact ttatcttgca aagctcgaag aggcaatttt
    15841 ctttggtatc tacccaccaa tttctcccca atcttcccag caagctctga aaaatcttcc
    15901 tctgccagcc ttttatcaat cagcggttta ggaattcctt tctgcatcaa cttctgccga
    15961 atcatagctg gtcccttatc tccatttaga gcattctgac ggacatagct atcaatataa
    16021 ttcccatcgt ccagccattt ttcctcttct agtaccgtca ctatcttaac aatattgttt
    16081 tcttcaattt catatttttt tagataatca ctaacttctt ttttggtacg ttgcttgaag
    16141 gaaaggtaat aaagtgctag atttttccca taagaaaatt gagcaaaatc gcgaagctca
    16201 cgaaactcct gctccgtgat ttccttgccc ttactaagca tgaagcgaac aattgtgtct
    16261 tccgtaatat ataaactatc ctgaccatcc acttcaagta aataaagacg tttcttcttt
    16321 tcaatttttg taattctcat tctttcatta tacaggattt ttcggtaaaa taataatatg
    16381 aatctacaag taaaccaacg aatcccctta aaaatcaaac gaatgggcat caacggagaa
    16441 ggcatcggat tttatcaaaa aacgctagtc tttgtccctg gtgcccttaa gggagaagaa
    16501 attttttgtc aaattacctc agtcaaacga aatttcgttg aagcaaaatt gttaaaaatc
    16561 aacaaggaat caaaattccg tgtcaagcct gcctgtgaca tctatcaagc ctgtggtggt
    16621 tgtcaaatca tgcacctccg ctatgataaa caattagact tcaaacaaga tctcttgcag
    16681 caggccctaa aaaagttcaa accagctggc tatgaaaact acactattta tccaacaatc
    16741 ggtatggata agcctagtca ctatcgtgcc aaattacagt tccagactcg atctttcaaa
    16801 gatcaagtca aggccggtct ctatgcggaa aattcccatc gcttgattgg aattacgaat
    16861 tgttacgtcc aagatgccga aacacaagag attatcaacg gaatcgcaaa actactcacc
    16921 aagcaccgta ttcctattta caatgagcgc aagcaacatg gaatccgcac ggttatggtc
    16981 cgcaaggctc gaaaaacagg tcaagttcaa gtaatcttta tcacctcttg tcaggttaat
    17041 cttattaaat taattgatga actcaccagt caatttccaa gtataatcac tattgctcta
    17101 aactggaata gacagaaaac gagtgatatt tatggggaaa aaacagaaat tttatgggga
    17161 gaacaagcta tcgatgaggc tgttttagat tacgaattct cactatctcc acgggcattt
    17221 taccaattaa atccccaaca aacagaaatt ctctatggcg aggccgtcaa ggctttggat
    17281 atttcaggag atgaagactt gattgatgcc tactgtggcg tgggcacaat cggcttcgcc
    17341 tttgctaaaa aggtcaaatc tgttcgaggt atggacatta ttccagaagc catcgaggat
    17401 gctaaagcaa acgctaagcg aatgggacta tccaataccc actatgaggc aggtaaagca
    17461 gaagaaatca ttccaaagtg gtaccaagaa ggctacaggg ccgatgcctt ggtagttgat
    17521 cctccacgga ctggactcga cgaaaagctc ctcaaaacca ttttggatta caaaccagct
    17581 aaaatggttt atgtatcctg caacgtctcc actcttgcaa gggaccttgt tgagctaagc
    17641 aaagcctaca aggtagaata cattcaatct gtcgacatgt ttcctcacac agcacggacc
    17701 gaggcggttg ttaaactaag caaaaaataa aaggcctata agactatgac gggtaaaccc
    17761 actatggtca tatagagcct ttttgagtgt agaaaaaagt cccctacgac ctacactgaa
    17821 aaacaacaaa actcacattt tccaacacca aattagaaac aactaacaat ctcatcaaag
    17881 tcataaaaaa atgcctttgg tttcaggaag ataaaaacta gaaaaatgga ttttgattgc
    17941 cttaaacacc aaaaag
//
LOCUS       DBNFCX010000042        17326 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.042, whole genome shotgun sequence.
ACCESSION   DBNFCX010000042 DBNFCX010000000
VERSION     DBNFCX010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 17326)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17326)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17326
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.042"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            17..199
                     /locus_tag="AC1PJC_001260"
     CDS             17..199
                     /locus_tag="AC1PJC_001260"
                     /EC_number="5.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001117229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase"
                     /protein_id="HIP6620248.1"
                     /translation="MPFVRIDLFEGRTEEQKIALAREVTEVVSRNTNAPKEAIHVFIN
                     DMPEGTYYPQGEMKRK"
     gene            complement(249..2081)
                     /gene="lepA"
                     /locus_tag="AC1PJC_001261"
     CDS             complement(249..2081)
                     /gene="lepA"
                     /locus_tag="AC1PJC_001261"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017645216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HIP6620249.1"
                     /translation="MNLEDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSRE
                     MQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLA
                     ACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPIINKIDLPAADPERVRQEIEDVI
                     GLDASEAVPTSAKAGIGIEEILEQIVEKVPAPTGDVEAPLQALIFDSVYDPYRGVILQ
                     VRIVNGVVKPGDTIQMMSNGKTFDVTEVGIFTPKAIGRDYLATGDVGYIAASIKTVAD
                     TRVGDTVTLAENPASEPLAGYKQMNPMVFAGIYPIDSNKYNDLREALEKLQLNDASLQ
                     FEPETSQALGFGFRCGFLGLLHMDVIQERIEREFNIDLIMTAPSVVYHVNMTDGEMID
                     VANPSEFPDPTKIATIEEPYVKAQIMVPQEYVGAVMELAQRKRGDFVTMDYIDDNRVN
                     VIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRSSKLVKMDILLNGDKVDALSFI
                     VHKEFAYERGKIIVDKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGG
                     DVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDEDDKK"
     gene            complement(2177..2590)
                     /gene="ndk"
                     /locus_tag="AC1PJC_001262"
     CDS             complement(2177..2590)
                     /gene="ndk"
                     /locus_tag="AC1PJC_001262"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HIP6620250.1"
                     /translation="MERTFFIIKPDALKRGLAGQILSRIERRGFQIRDLKMVTATEEL
                     ISQHYDHLTDKTFFPQLVQYMTSGPMIAGIIEGPEIIKSWRDMMGATNPVNALPGTIR
                     GDFATAPVEGIVANVVHGSDSAEAAEREIGLWLGK"
     gene            complement(2613..3200)
                     /gene="yihA"
                     /locus_tag="AC1PJC_001263"
     CDS             complement(2613..3200)
                     /gene="yihA"
                     /locus_tag="AC1PJC_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002915299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HIP6620251.1"
                     /translation="MEINTHNAEILLSAVSKAQYPGDDIPEIALAGRSNVGKSSFINT
                     LLGRKNLARTSGKPGKTQQLNFYNIDDKIRFVDVPGYGYAKVSKTERAKWGKMIEEYL
                     TTRENLRVVVSLVDMRHEPSADDVQMYDFLKYYEIPVIIVATKADKIPRGKWNKHESM
                     IKKKLDFDKNDQFVIFSSETRHGYDQAWDAILSNI"
     gene            complement(3255..4481)
                     /gene="clpX"
                     /locus_tag="AC1PJC_001264"
     CDS             complement(3255..4481)
                     /gene="clpX"
                     /locus_tag="AC1PJC_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HIP6620252.1"
                     /translation="MAVKHTHELIYCSFCGKNQEEVKKIIAGNNVFICNECVELAQEI
                     IREELAEEVLTDLADTPKPQELLNILNNYVIGQDRAKRALAVAVYNHYKRINFQDSRD
                     ENDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVENIL
                     LKLLQAADFNIDRAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVA
                     SVPPQGGRKHPNQEMIHVDTKNILFIVGGAFDGIEEIVKQRLGEKIIGFGHNNRAIDE
                     KESYMQHIIADDIQKFGIIPELIGRLPVFAALDQLTTEDLVRILTEPKNALVKQYQTL
                     LSYDDVELDFDEDALLAIAEKAIERKTGARGLRSIIEETMLDVMFEVPSQDNVKRVRV
                     TKAAVDGKEKPLLETA"
     gene            complement(4679..5191)
                     /locus_tag="AC1PJC_001265"
     CDS             complement(4679..5191)
                     /locus_tag="AC1PJC_001265"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HIP6620253.1"
                     /translation="MTKKIVAIWAQDENGLIGKGDRLPWSLPADLAHFKETTTGHTMV
                     MGRITFDGMGKRALPNRHTIVLTTDKTYQLESERVTILHSVEDVLDWYNKQEHTLFVI
                     GGGQIFTAFAPYIETLIVTDIHGQFNGDVYFPKAFPMEKFQLQSANLRPKDEKNPYDF
                     TIKTYERRDG"
     gene            complement(5529..6368)
                     /locus_tag="AC1PJC_001266"
     CDS             complement(5529..6368)
                     /locus_tag="AC1PJC_001266"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003011065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HIP6620254.1"
                     /translation="MTKADIIFKENIRKIMEEGVFSENARPRYKDGNVANSKYVTGAF
                     AEYDLSKGEFPITTLRPIPIKSAIKEILWIYQDQTNDLSVLQEKYGVQYWNDWEVNGT
                     GTIGERYGAIVKKHDIISKILKQLEENPWNRRNVISLWDYEAFDQSAGLLPCAFQTMF
                     DVRRVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNL
                     HIYDNQFEQAEELLRRTPSEVEPRLVLNVPDGTNFFDIRAEDFELVDYNPVKPQLKFD
                     LAI"
     gene            complement(6421..6723)
                     /locus_tag="AC1PJC_001267"
     CDS             complement(6421..6723)
                     /locus_tag="AC1PJC_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620255.1"
                     /translation="MNLTLLKRLNLVLYGIAIFLFVMLFLPIGQWFDIVNVNFKLTFF
                     IIPFFGLASLPTAIYTKNVRQILLSVLLVALYFIQFSLITALSGLFHLNFYSFFFK"
     gene            complement(6735..7013)
                     /locus_tag="AC1PJC_001268"
     CDS             complement(6735..7013)
                     /locus_tag="AC1PJC_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620256.1"
                     /translation="MKQVNMSKIINYLTILGLLILLSAFFLDNWIRDWFFPSSWGNVA
                     TMLILPLLGALILILSIYYKKLWTGLISIFLIISFPLIFGIGYFIFGP"
     gene            complement(7139..8098)
                     /locus_tag="AC1PJC_001269"
     CDS             complement(7139..8098)
                     /locus_tag="AC1PJC_001269"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002919069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004340 - glucokinase activity [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0051156 - glucose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family glucokinase"
                     /protein_id="HIP6620257.1"
                     /translation="MSKKIIGIDLGGTSVKLAILTTEGEIQEKWSIKTNILDDGSHIV
                     PDIIDSIKQRFDTHGLTKDDFLGVGMGSPGVVDSEAGTVIGAYNLNWKTLQLVKDQFE
                     AALGLPFFIDNDANVAALGEQWVGAGNNNPNVVFMTLGTGVGGGVIAAGNLIRGVKGA
                     GGELGHITVDFDKPFACTCGKKGCLETVASATGIVNLSRRYADQYAGDAKLKQMIDDG
                     QDVTAKDVFDLAKEGDDLALIVYRHFSEYLGVACANIAAVLNPAYIVLGGGVSAAGEF
                     LLDGVRKVFAENSFPQIKESTQIVLATRGNDAGVLGAASLVLK"
     gene            complement(8194..8529)
                     /locus_tag="AC1PJC_001270"
     CDS             complement(8194..8529)
                     /locus_tag="AC1PJC_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620258.1"
                     /translation="MKVLVMSYMVIYLLVTLGAALFSYLKTRKMNTLRLILTILSMIL
                     LTSTLYFYSQSYHDLQMVGFALGFTFISTLFLYNGTKEGSNFTTVMLFSIGRFILHIQ
                     FLILLYLFR"
     gene            complement(8530..10398)
                     /locus_tag="AC1PJC_001271"
     CDS             complement(8530..10398)
                     /locus_tag="AC1PJC_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011836912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HIP6620259.1"
                     /translation="MSDFIVEYLTKSVGDKTVFANLSFIIHQGDRIGIIGVNGTGKTT
                     LLDVLSGRIGFDGDVSPFRTKNAYKIAYLTQEPDFDESKTVLDTVLSSDLRETQLIRE
                     YELLLSHYDEASQARLEKVMAEMDSLNAWEIESQVKTVLSKLGLTDLNKTVAELSGGL
                     RRRVQLAQVLLGNADLLLLDEPTNHLDIDTIEWLTTFLKNTKKSVLFITHDRYFLDNV
                     ATRIFELDRASLTEYQGNYQDYVRLKAEQDERDAALRHKKEQLYKQELAWMRRQPQAR
                     ATKQQARINRFHDLKGDLANKIDDSELEINFETSRIGKKVINFENVSFSYPDKPILKD
                     FNLLIQNKDRIGIVGDNGKGKSTLLNLIAGDLHADSGKVDIGETIRIGYFSQTIKGLD
                     ESKRVINFLQEVAEEAKTTSGMVSIAELLEQFLFPRNTHGTLIEKLSGGEKKRLYLLK
                     ILLQRPNVLLLDEPTNDLDIATLTVLEHFLQGFTGPVITVSHDRYFLDKVANKILAFE
                     EDGIQTFFGNYTDYLDEKAFLASSSAISLEKPKEKTEKIKENKKRMSYFEKQEWATIE
                     EDIAGLEERIAEIEAEMLTCGSDFTKLSDLQKELDEKNDLLLEKYERYEYLSELEG"
     gene            complement(10391..11602)
                     /locus_tag="AC1PJC_001272"
     CDS             complement(10391..11602)
                     /locus_tag="AC1PJC_001272"
                     /EC_number="2.7.7.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0001680 - tRNA 3'-terminal CCA addition
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HIP6620260.1"
                     /translation="MKLNNLPSEFQEALPILEKIKAAGYEAYFVGGSVRDAILGRPIH
                     DVDIATSSYPQETKQIFSRTIDVGIEHGTVLVLEGKKEYEITTFRTEEEYVDFRRPSQ
                     VSFVRSLEEDLKRRDFTVNAFALDEEAQIVDLFDGMTDLENRTLRAVGIPAERFNEDA
                     LRIMRGFRFAATLDFEIEPTTFTAMVETAPLLEKISVERSFIEFDKLLMADFWRKGLR
                     AMIDSKAYNFLPDLAGKGEQLASMLSSLAEDFRFSTSEQAWALLFVCLGIDNIKSFLK
                     KWKTSNDFQRSVVKLVEIYQLRQEGPVTKQICFKYGKEFLYLVEELRQAQGFVTDFAA
                     IDKIDQALTIHDKHEIVVNGGHLMKAFDLKPGPVLGELLKEVEFQIVEGQLENEEQAI
                     MTFVKGILENE"
     gene            complement(11599..12366)
                     /gene="dapB"
                     /locus_tag="AC1PJC_001273"
     CDS             complement(11599..12366)
                     /gene="dapB"
                     /locus_tag="AC1PJC_001273"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002262893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HIP6620261.1"
                     /translation="MTIKVIIAGFKGKMGSTAVEMVKGDAELSLAALVDPFATETEVD
                     GVPVFKTKEEVASLEADVWVDFTTPKFAYENTRFALENGFAPVVGTTGFTPEEIEELT
                     ALSAEKGLGGLIAPNFAIGAILLMQFAAQAAKYFPNLEIIELHHDKKKDAPSGTAVKT
                     AELISQVRQSQTQGAADEEELIAGARGAEFDGFRIHSVRLPGLVAHQEVIFGAQGEGL
                     TIRHDSYDRISFMGGVNLGIKEVVKRSQLVYGLEHLL"
     gene            complement(12375..13226)
                     /locus_tag="AC1PJC_001274"
     CDS             complement(12375..13226)
                     /locus_tag="AC1PJC_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005504 - fatty acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HIP6620262.1"
                     /translation="MKLAVITDSSAVLNVQSIERDDLFVLSIPVSIDGENYIEGQNLT
                     VEEFYQKMASSKELPKTSQPSLMELEEILAKLTEKGYTHALGLFLSSGISGFYQNIQY
                     LADEFEGLTVAFPDTKITSAPLGMMVENVLKWADAGLSFEEITGKLDQEIGKTTAFIM
                     VDDLNHLVKGGRLSNGAALLGNLLSIKPILYFTGEGKIEVYEKVRTEKKAIKRLLEIL
                     QEQTTEGQYQIAIIHANAPQKAENFKQQLEEAGVGSDLPIVSFGSVIGTHLGEGAVAF
                     GISPIIE"
     gene            complement(13228..13602)
                     /locus_tag="AC1PJC_001275"
     CDS             complement(13228..13602)
                     /locus_tag="AC1PJC_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002305392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1149 family protein"
                     /protein_id="HIP6620263.1"
                     /translation="MEIIRDKEFVNQYHFDARNHAWEKENGIPETKLKVDFQLIEQNR
                     AENRTSMITILRFMIVLDHFVISGAMSQAVHLPNRLVEEPTEFTDEEKRVLVEPLLDI
                     LKRMTYEVTEIAFDAPGVNLEF"
     gene            complement(13698..15653)
                     /locus_tag="AC1PJC_001276"
     CDS             complement(13698..15653)
                     /locus_tag="AC1PJC_001276"
                     /EC_number="2.7.1.202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005351 - carbohydrate:proton symporter
                     activity [Evidence IEA];
                     GO_function: GO:0022877 -
                     protein-N(PI)-phosphohistidine-fructose phosphotransferase
                     system transporter activity [Evidence IEA];
                     GO_function: GO:0090563 - protein-phosphocysteine-sugar
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIABC"
                     /protein_id="HIP6620264.1"
                     /translation="MKIQDVLRKDVMLLDLQATSKEAVIDEMIASLVDKGYVTDFDVF
                     KTGIMNREAQTTTGLGDGIAMPHAKNAAVKEATVLFAKSNKGVDYASLDGQPTDLFFM
                     IAAPEGANDTHLAALAELSKYLMKPGFADKLRGVSSPEEVISVFDAAEAADKATEEVV
                     AAPSGDRPFIVAVTACTTGIAHTYMAEEALKKQAAEMGVDIKVETNGASGVGNKLTAE
                     DIKNAAGVIIAADKAVDMPRFNGKPLVSRPVAAGIKQPEELINLILEGKASAYTASEG
                     AATVESSEKLSLGKAFYKHLMSGVSQMLPFVIGGGILIALAFLFDGALGVPQDSLGSL
                     GSYHEIAAMFMKIGGAAFGFMLPLLAGYIAYSIAEKPGLVAGFVAGAIASSGLAFGKI
                     PYAAGGEETLALAGVSSGFLGALVGGFLAGGVVLVLRNALRNMPKSLQGLNAILLLPL
                     LGTAITGFLMFFVNIPMAAINTGMNNFLAGLEGSSAILLGLVLGGMMAVDMGGPVNKA
                     AYVFGTGTLAATVADGGSVAMAAVMAGGMVPPLAVFVATLLFKDKFTQEERNSGLTNI
                     VMGLSFITEGAIPFGAADPARAIPSFIAGSALAGALVGLSGIQLMAPHGGIFVIALTS
                     NPLLYIAYVLIGAVVSGVLYGALRKAK"
     gene            complement(15650..16561)
                     /gene="pfkB"
                     /locus_tag="AC1PJC_001277"
     CDS             complement(15650..16561)
                     /gene="pfkB"
                     /locus_tag="AC1PJC_001277"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019323947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008662 - 1-phosphofructokinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HIP6620265.1"
                     /translation="MIYTVTLNPAIDYIVRLDRVETGSVNRMESDDKYAGGKGINVSR
                     VLKRLGYPNTATGFLGGFTGQFIKDGLIAEGIDTDFVQVDQDTRINVKIKADQETEIN
                     GLGPIVTDTQLAELEMVLAGLTKEDTVVFAGSAPASLGNEVYNRLIPVAKKAGAQVVC
                     DFEGQTLLDSLAHQPLLVKPNNHELEAIFNVELNGIADIETYAKKILEMGAQNVIISM
                     AGDGALLVTPAATYFAKPIKGTVKNSVGAGDSMVAGFTGEYVRSQDPIEALKWGVACG
                     TATAFSDDLASIEFIKETYEKVEVETL"
     gene            complement(16558..17307)
                     /locus_tag="AC1PJC_001278"
     CDS             complement(16558..17307)
                     /locus_tag="AC1PJC_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family DNA-binding transcription
                     regulator"
                     /protein_id="HIP6620266.1"
                     /translation="MDILKSERKQIILERIHSQQFVRLEELIEVLDTSESTVRRDLDE
                     LENEGKLRRVHGGAEAPGNLQLEESILEKSVKNVQEKREIAERAARQIVNGDVIFLDA
                     GTTTGVLIDYLQQENLTVVTNSIHHAVRLVERKIKTIIIGGFVKQSTDASVGAVALEQ
                     IRQLNFDKAFLGMNGIDKNYFTTPDIEEATIKRTIIDNAKESYVLADASKIGQFSFVK
                     VAAIEKSNIICQSSESSLLDIIKEKTRVIEV"
BASE COUNT         4977 a         3997 c         3332 g         5020 t
ORIGIN      
        1 ataaaggagg aaatatatgc catttgtacg tattgatttg tttgaaggac gcacagaaga
       61 acaaaagatt gccttagcac gtgaagttac cgaagttgta tctcgtaata ctaatgcgcc
      121 caaagaagcc attcatgtct tcatcaatga tatgcctgaa gggacctact acccacaagg
      181 tgaaatgaaa cgtaaataag agaaaacact cttgcaagaa aatgcaggag tgtttctttg
      241 tatcaagttt atttcttatc gtcttcatcc atgctgagaa cactgaggaa ggcttcttgt
      301 ggaacttcga cagagccgat ggctttcatg cgttttttac cagctttttg tttttccaag
      361 agtttgcgtt tacgggaaac gtcaccgcca taacatttag ccaatacgtt cttacgaagg
      421 gccttgatgt cgctacgggc aacaattttc tgaccgatag ctgcttggat tggtacttca
      481 aactgttgac gaggaatgat ttttttgagt ttgtccacga taattttccc acgttcgtag
      541 gcaaattcct tgtggacgat aaagctgagg gcatcgacct tgtcaccatt gaggagaata
      601 tccattttca ccaacttgga tgaacggtat tcagaaatct catagtcgaa gctggcataa
      661 ccacgagtgg atgacttaag cttatcaaag aagtcaaaaa caatctccgc cagtggaatt
      721 tggtagatga cattgacacg attatcatcg atgtaatcca tagtcacaaa gtcaccgcgt
      781 ttgcgttggg ccaattccat gactgcaccg acgtattcct gtggtaccat gatttgtgcc
      841 ttaacgtaag gctcttcgat agtggcaatc tttgttgggt ctgggaattc ggatgggttg
      901 gctacatcaa tcatttcacc gtccgtcatg ttgacatggt aaaccaccga tggtgctgtc
      961 atgatgaggt caatgttaaa ctcacgctca atccgttctt gaataacatc catgtgcaag
     1021 aggcccaaga atccacaacg gaaaccaaat ccgagtgcct gcgatgtttc aggttcgaac
     1081 tgcaagctgg catcgttaag ctggagtttt tctaaagctt cacgcaagtc attatactta
     1141 ttggaatcaa tcggatagat accggcaaag accattgggt tcatctgctt gtagcccgct
     1201 agtggctcac tggcaggatt ttcagccaag gtcaccgtat caccgacacg ggtatctgca
     1261 accgtcttga tagaagctgc gatataacca acatcacctg tcgccaagta atcacgaccg
     1321 attgctttgg gtgtgaaaat ccccacttcc gtcacatcga aagtcttacc attactcatc
     1381 atctgaatgg tatcaccagg ttttaccaca ccattgacaa tacgaacttg gaggataacg
     1441 cctcgataag gatcataaac cgagtcaaaa atcaaggctt gcaatggagc ttcgacatca
     1501 ccagtcggtg ctggaacctt ctcgacaatc tgctccaaga tttcctcgat accaatacct
     1561 gccttggctg atgttggcac tgcttcagaa gcatccaaac caatcacatc ttcgatttcc
     1621 tgacgaacac gttctgggtc tgctgctggc aggtcaatct tgttaatgat tggcaagatt
     1681 tccaaatcat tgtccaaggc tagataaacg ttagccaagg tctgtgcttc aatcccttga
     1741 gcagcatcca ccactaaaat cgctccctca caggcagcca acgaacgcga tacttcatag
     1801 gtaaagtcaa cgtgtcctgg tgtgtcaatc aagtggaaaa tgtatgtctc tccatcttta
     1861 gctgtatagt tgagttcgat tgcgttgagt ttaattgtga tgccacgctc gcgttccaag
     1921 tccatactat ctagcaactg ggcttgcatt tcacggctgg aaactgtttc tgtcttctca
     1981 agaatacggt cagccaaggt tgatttacca tggtcgatgt gagcaataat ggagaaatta
     2041 cgaattttct cctgtcgttt tttcaaatct tctaaattca tgtttcttcc tctacaaggg
     2101 tattactcct cattatatca gatttagtga taattttcca taagaaaaac acctagaaaa
     2161 ctaggtgtct gctctgctat tttcccagcc aaagaccgat ctcgcgttcg gctgcttctg
     2221 cactatctga gccatgaacg acatttgcca caattccctc aacgggcgct gtcgcaaaat
     2281 ctccacgaat agtcccaggt agggcgttta ctggattggt agctcccatc atatctcgcc
     2341 aagatttgat aatttctggc ccttctataa tgccagctat catcggcccg ctcgtcatat
     2401 attgtactaa ttgcgggaag aaagttttat ctgtcaaatg atcataatgt tgactgatta
     2461 gctcttctgt cgctgtaacc atttttaaat ctcggatttg aaatcccctg cgttcgatac
     2521 gtgaaagaat ttgtcctgca agtccacgct taagagcatc tggtttgatg atgaagaaag
     2581 tacgttccat gatttttctc ctggactgtt tattagatgt tacttaagat agcatcccat
     2641 gcctgatcgt atccgtgacg agtctcagaa gaaaagataa cgaattgatc atttttatca
     2701 aaatccaatt tctttttaat catcgattcg tgcttattcc actttcctcg tgggatttta
     2761 tcagccttcg ttgccacaat aataacagga atttcataat atttcaagaa atcatacatt
     2821 tgaacatcat ctgctgatgg ctcatgacgc atgtctacta aactcaccac aacacgtaga
     2881 ttttctcgtg ttgtcaaata ctcttcgatc atttttcccc acttagcgcg ctccgttttg
     2941 gacactttag catagccata acctggaaca tctacaaatc gaattttatc atctatatta
     3001 taaaaattga gttgttgagt ctttcctggt tttcctgacg tacgtgcaag attttttctt
     3061 cctagaagag tattgataaa tgaggacttt ccaacgttag atcgcccggc aagggcaatt
     3121 tctggaatgt catcgcccgg atactgggct tttgaaacag cactgagcaa aatctcagca
     3181 ttatgtgtgt tgatttccat tttatacctt tcataaataa gggtagaaaa caatcagttt
     3241 ccacccttta ttttttatgc agtttctagt aaaggctttt ccttaccgtc tactgctgct
     3301 tttgttacac gaacacgttt aacgttatct tggcttggca cctcaaacat gacatccaac
     3361 atcgtttctt caatgatgga acgaagtcca cgagcaccag tcttacgttc aattgccttt
     3421 tctgcaattg ctaacaaggc gtcctcatca aagtcaagct ccacgtcatc ataagacaag
     3481 agtgtctggt attgttttac aagagcattc ttcggttccg tcaaaatacg taccaaatcc
     3541 tctgttgtca attggtccaa agctgcgaat acaggcaagc gaccaatcaa ctctggaatg
     3601 ataccgaatt tttgaatatc gtctgcaatg atatgttgca tgtatgattc tttttcatca
     3661 atcgcacgat tattatgacc aaaaccgatg attttttcac cgagacgctg tttgacaatt
     3721 tcttcgatac catcaaatgc accgccaacg ataaacagga tatttttggt gtccacgtga
     3781 atcatttcct ggtttggatg tttgcgtccg ccttgtggtg gtacgctggc cacagttccc
     3841 tcgataattt ttaggagagc ttgctggaca ccttcaccag acacatcgcg ggtaatggac
     3901 acattttcac cttttttggc aatcttatca atttcatcca catagataat tcctctttct
     3961 gcacggtcga tgttaaagtc tgcagcctgc aaaagtttga ggaggatatt ttctacgtct
     4021 tcaccaacat aacccgcctc agtaagagcg gtcgcatcag caatagcaaa cgggacattc
     4081 aaacttttag ccaaggtctg agctaggaag gtttttcctg agccagtcgg gccaatcatg
     4141 aggatatttg atttttgcaa atcaacatcg ttctcatcac ggctatcttg gaaattgata
     4201 cgtttgtagt ggttgtaaac ggctactgct aaagcacgtt ttgcacgatc ctgtccgatg
     4261 acgtagttgt tcaggatatt gagtaattct tgtggctttg gcgtatcggc caagtctgtc
     4321 aaaacttctt ctgccagttc ctcacgaatg atttcctgtg ctagttccac gcactcatta
     4381 caaatgaaga cattgttccc tgcgataatt tttttaactt cttcttgatt ttttccgcaa
     4441 aatgagcaat agattagctc atgtgtatgc ttaacagcca tatgtttcct ctttcatatc
     4501 tcttatctaa ataaaaatcc ataaatggca tgaatactat tgaccagatt ggtaaaagca
     4561 ttcagtaaaa ataaaattgc taaaccaaaa cgtttcttcc gaaaggcttg aatcgcacaa
     4621 agaacacaaa tcccacagag aaatgctgta aataaaccga ataaacttct ctccatgcct
     4681 aaccatctct tctttcatag gtttttattg taaaatcata cgggtttttc tcgtcttttg
     4741 gacgtaaatt ggcgctttgt agctgaaatt tctccatagg aaatgctttc ggaaaataca
     4801 catcgccatt aaattgaccg tgaatatctg tcactattaa tgtttcaatg taaggtgcaa
     4861 aagcagtaaa aatttgtccc ccaccaatca caaatagtgt atgctcctgt ttgttatacc
     4921 aatctaggac atcttccaca ctgtgtaaaa tggtaacacg ttcactctct agttgatagg
     4981 ttttatccgt tgtcaaaacg atggtgtgac gattgggaag agcacgttta cccatgccgt
     5041 cgaaggttat acgtcccatc accatcgtgt gacctgttgt cgtttctttg aaatgagcta
     5101 agtcagctgg caatgaccaa ggaagtctat caccttttcc aatcaatcca ttttcatctt
     5161 gagcccaaat ggcaacaatc tttttagtca ttttctctca ctttccgtcc tatcattcta
     5221 tcaaaaaaac atgaaaaatg cacttaccaa gtaggccaag cgcaaatttt tatcatgttg
     5281 aaactatcac caactcctca gagataggga agattccgag attcgtagaa tgtgaatctc
     5341 gctggtgctg gaaagccccc ctcatcttaa atcgccaagt caaatttgag ttgcggttta
     5401 actggcttcg aaagtctgag tatagactgt tgaaggttgg aagtgaaaca gttcggggaa
     5461 ctgtttcagc ccgagcctaa aaataaagaa gcgaggtaaa agaacgaagt tcttcactgc
     5521 taatccagtt aaattgctaa atcgaatttt aactgcggtt taactggatt gtagtccacc
     5581 aattcaaaat cttctgcccg aatgtcaaag aaattggtgc cgtcaggaac atttaagacc
     5641 aaacgtggct caacttcaga tggtgtgcga cggagtaatt cttcagcctg ttcaaactga
     5701 ttgtcataga tgtgaagatt gttgatgaaa tagaaaaact tcccaacctt ccatccaaaa
     5761 tgtttagcaa tcatcatctg aagggctaca tactgcatag cgttgatatg atgggctacc
     5821 aacatatcat ttgaccgttg agttagagtt gcatccagat aaatctcccc atccactcgc
     5881 cgaacgtcaa acatggtctg aaaggcacat ggcaaaagac ccgcggattg gtcaaatgct
     5941 tcataatccc acaaagaaat cacattacgg cggttccatg gattttcctc taattgcttg
     6001 aggatttttg aaatgatgtc atgctttttc acgatagccc catagcgttc accgattgtg
     6061 cctgttccat ttacttccca gtcattccaa tactggacac cgtatttttc ctgcaaaacc
     6121 gacaaatcat tggtctggtc ttggtaaatc cagagaattt ccttaatggc cgacttaatt
     6181 ggaataggtc taagtgttgt aataggaaac tcccccttag acaagtcata ctcagcaaag
     6241 gcgcctgtaa cgtacttgga attagcaaca tttccatcct tgtaacgtgg gcgagcattt
     6301 tccgaaaaaa cgccctcttc cataatctta cgaatgtttt ctttaaaaat aatatctgct
     6361 ttagtcatgg tcttagtata gcaaattcta gcaaaaaact ccagttttgc accggagttc
     6421 tcatttgaaa aagaatgaat aaaaattaag gtggaacaaa ccagataggg cagttattag
     6481 gctgaactgt ataaaataca aggcaaccaa gagaacactc aacaatatct gacgaacatt
     6541 tttagtgtaa atagccgttg gtaagctggc tagtccgaaa aatggaatga tgaaaaatgt
     6601 tagtttaaaa ttcacattta caatatcaaa ccattgccct attggcaaaa atagcatgac
     6661 gaagagaaaa attgcgatac catacaaaac tagatttaat ctttttagta aagtcaggtt
     6721 cataaccgct ccttctaggg gccaaatata aagtagccaa taccgaatat cagaggaaat
     6781 gagattatta agaagatact aatcaaacca gtccacaatt ttttataata gatagatagt
     6841 atgagaatta gagcccccag tagagggaga atcaacatgg ttgctacgtt tccccagcta
     6901 gacgggaaaa accagtcacg aatccagtta tcaaggaaaa aagcagataa caaaatcaat
     6961 aaaccaagaa tggtcagata gttgattatt ttagacatgt ttacctgttt cataaggtga
     7021 cactcctttc tctttacact ttcattgtac gcttaaatac tatatttttc aatatatgta
     7081 tataaagaaa atgtgacagc ggaattgaaa aaaagcagag tttcccctgc ttcagttatt
     7141 atttcaaaac aagtgatgct gcgcccaata cacctgcatc attaccacgt gttgccaaaa
     7201 caatttgtgt actttcctta atttgtggga agctattttc agcaaagacc ttacgaacgc
     7261 catccaataa gaactctccc gcagctgata caccaccacc aagaacgatg taggcaggat
     7321 tgaggactgc agcaatgttt gcacaagcaa cacctaagta ttctgagaag tgacggtaga
     7381 caatcaaagc caaatcatcg ccttcttttg ccaaatcaaa gacatcttta gccgttacat
     7441 cttgcccatc atcaatcatt tgtttcagtt ttgcatcgcc tgcgtattga tcagcatagc
     7501 gacggctgag gttgacaata cctgtcgctg aagcaactgt ttctagacaa cctttcttac
     7561 cacaagtaca tgcaaatggc ttatcaaagt caactgtgat atgacctaat tcaccaccag
     7621 cgcctttgac accacgaatc aagtttccag cagcgatgac gccaccaccg acacctgtac
     7681 caagcgtcat aaagacaacg tttggattgt tgtttccagc accaacccac tgctcaccta
     7741 gagccgctac gtttgcatca ttgtcgataa agaatggtaa accgagcgca gcttcaaact
     7801 gatctttaac caattgcaaa gttttccagt tgaggttata ggcaccgata actgtcccag
     7861 cctcactatc aacaacgcct ggtgaaccca tacctacacc caaaaagtca tcttttgtca
     7921 aaccatgggt gtcaaatcgc tgcttgatac tgtcaataat atcaggaaca atatgacttc
     7981 catcatctaa aatatttgtc ttgatagacc atttttcttg aatttctcct tcagtagtca
     8041 aaatggccaa tttaacagaa gttcccccaa ggtcaatacc gataattttt ttagacataa
     8101 tcatcacctc aaatgtattt tctttattat aacacaatgc aaaggtttgc gtaaagcctt
     8161 ttcaaaaatt tgtacggata aaaataaatt gctctatcga aagagataga gcaaaattaa
     8221 aaattgaata tgtaagataa accttccaat ggaaaagagc ataactgtcg taaaattact
     8281 accttctttc gttccattat agagaaaaag agtagaaata aaggtaaaac ctagagcaaa
     8341 ccccaccatc tgcaagtcgt gataagactg actataaaaa tacaaggtgc ttgtcagcaa
     8401 tatcatggat aggatagtta aaatcaagcg caatgtattc atttttcggg tctttagata
     8461 gctaaacaaa gccgctccca aggtcaccaa gagatagatg accatatatg acatgacaag
     8521 aactttcatc tagccctcca gttcgctcag atactcatac cgctcatatt tttccaagag
     8581 caggtcgttt ttctcatcca attccttctg caaatcggac aattttgtaa aatcactacc
     8641 acaggtcagc atttccgcct cgatttccgc aattcgctcc tccaagccag caatatcctc
     8701 ttcgatggtc gcccattcct gcttctcaaa gtaggacatc cgcttcttgt tctctttgat
     8761 tttctcggtt ttctcctttg gtttttccaa ggaaatggca gagctggaag ccagaaaggc
     8821 cttctcatct agatagtctg tgtagttacc aaagaaggtc tgaataccat cttcctcgaa
     8881 ggccaaaatt ttgttagcca ctttatctag gaaataacga tcgtgactaa cggtaatgac
     8941 tggaccagta aagccctgca agaaatgttc caagactgtc agagtcgcta tgtccaagtc
     9001 gttggtcggc tcatctagta agagaacatt gggccgttgc aagagaatct taagcaaata
     9061 aagtcgcttc ttctccccac cagacaactt ttcaatcagg gtaccatggg tattacgtgg
     9121 gaagaggaat tgttctaaga gttcggcaat agaaaccata ccagatgtcg tcttagcttc
     9181 ttctgccact tcctgcaaga aattgatgac ccgcttgctt tcgtccaagc ccttgatggt
     9241 ctgagaaaaa taaccgatac ggatggtttc accaatatct accttaccgc tgtctgcatg
     9301 caaatcacct gcgattagat tgagtaaggt agattttcct tttccattat caccgacaat
     9361 tcctatgcgg tccttgtttt gaatgagcag gttaaagtct tttaaaatgg gcttgtcagg
     9421 ataggaaaag ctgacatttt caaagttaat gacttttttg ccgatacgag aggtttcaaa
     9481 attgatttcc agttcgctat cgtctatctt gttggctaaa tcgcctttga ggtcatggaa
     9541 acgattgata cgagcttgtt gcttggtagc acgagcttga ggttgtctgc gcatccaagc
     9601 cagctcttgt ttgtagagtt gctctttctt atggcgaagg gcggcatctc gctcgtcctg
     9661 ttctgccttc aagcgaacat agtcctggta atttccctga tattcggtta agctggcgcg
     9721 atccaattca aaaatccgtg tcgccacatt gtccaagaaa tagcgatcgt gggtaataaa
     9781 gagaacagac tttttagtat ttttcaagaa agtcgtcaac cactcaattg tatcaatgtc
     9841 caggtggtta gtcggttcat ccagcaagag caagtcagca ttgccaagga ggacttgggc
     9901 caattgcact cgtctacgta gaccacctga taactcagca acggttttgt tgaggtctgt
     9961 tagcccaagt ttcgacaaga cagtcttgac ctggctttca atctcccaag cattgagaga
    10021 atccatctca gccatgactt tctccagtct tgcttgactg gcttcatcgt aatgagataa
    10081 gagcagctcg tattcacgaa tcagctgggt ttcacggagg tcagatgaaa gaacggtgtc
    10141 taaaactgtc ttactttcat caaaatcagg ttcctgggtc agataggcaa ttttataggc
    10201 attttttgta cgaaaaggtg atacatctcc gtcaaaaccg atgcgacctg acaggacatc
    10261 caacaatgtc gtctttcctg taccattgac cccaataatc ccgatacggt cgccttgatg
    10321 gatgataaaa gacagattag caaagaccgt tttatctccg acagatttag tcaggtattc
    10381 aacgataaaa tcactcattc tctaagattc ctttcacaaa tgtcataatc gcttgctctt
    10441 cgttttctag ctgtccttcc acaatctgga attccacctc tttgagtagt tctcccaata
    10501 ctggacctgg tttgaggtca aatgccttca tcagatgtcc tccattgaca acaatttcat
    10561 gcttgtcgtg gatagtcaag gcttggtcaa tcttatcgat tgctgcaaaa tctgtaacaa
    10621 aaccttgtgc ctgacgaagt tcctctacca agtataagaa ttctttgcca tacttgaaac
    10681 agatttgctt ggtaacaggc ccttcttggc ggagctggta aatctctacc aacttgacca
    10741 cgctgcgttg gaaatcattg ctggttttcc attttttcag gaaggacttg atgttatcaa
    10801 tacctaggca gacaaagagc agagcccaag cttgttcgga agttgaaaat cggaagtcct
    10861 ctgccaaact ggacagcata ctagccagct gctctccttt tccagctaaa tcaggcaaga
    10921 aattgtaagc cttggaatca atcatagcgc gcaagccttt tcgccaaaaa tccgccatca
    10981 agagtttatc aaactcgata aagctacgtt ccaccgagat tttttccaaa agcggtgcgg
    11041 tttcaaccat ggctgtgaag gtagtcggct caatctcaaa gtccaaggtc gctgcaaagc
    11101 gaaaacctcg catgatacgg agggcatctt cgttgaaacg ctcagccggg atgcctacag
    11161 cccgtagggt gcggttttct aagtcagtca tcccatcaaa gagatcaaca atttgagcct
    11221 cttcatccag agcaaaggca ttgactgtga agtcgcgacg tttgagatcc tcttctaagg
    11281 aacgcacaaa agaaacctga ctcggcctac ggaagtcgac atactcctct tctgtccgaa
    11341 aggtggtaat ttcatactcc tttttaccct ctaatactag caccgtaccg tgttcaattc
    11401 cgacatcaat agtccgtgaa aagatttgtt tcgtttcctg agggtagctg gatgtcgcaa
    11461 tatcgacatc atgaataggc ctaccgagaa tggcatcacg aacggaaccg ccaacgaaat
    11521 aagcctcgta accagctgct ttaattttct ctaaaatcgg caaagcctcc tgaaactcag
    11581 aaggcagatt gtttaatttc ataataagtg ttccaaacca taaacgagtt gtgagcgttt
    11641 gactacctct ttaatgccga gattgacacc gcccataaag gaaatacgat cgtaagagtc
    11701 atgacgaatg gtcaagcctt ctccctgtgc cccaaaaatc acttcctgat gggcaacaag
    11761 gcctggcaag cgtactgagt ggatacggaa gccgtcaaat tctgccccac gagcgccagc
    11821 aatcagttct tcttcatccg ctgcaccttg agtctgtgac tgacgaactt gggaaatgag
    11881 ttcggccgtt ttgacagccg taccactcgg tgcatccttc ttcttatcgt ggtgtaattc
    11941 aatgatttca agatttggga aatacttggc tgcctgtgct gcaaattgca tgagcaagat
    12001 agcaccaata gcaaagttag gagcaatcaa gccacccaaa cccttctcag ctgacaaggc
    12061 agtcaattcc tcaatttctt caggggtaaa tcctgtcgtt ccaaccacag gtgcgaaacc
    12121 attttccaag gcaaaacggg tgttttcata ggcaaatttt ggcgttgtaa aatccaccca
    12181 gacatcagct tctaggctgg caacttcttc tttggtcttg aaaacaggaa caccatctac
    12241 ttctgtttct gtcgcaaatg ggtctaccaa ggcagccaga ctaagttctg cgtcaccctt
    12301 gaccatctca acagccgttg agcccatttt tcctttgaat cctgcgataa ttaccttaat
    12361 tgtcatgcaa actcctattc aataatggga gaaataccaa aggccactgc cccttctccc
    12421 aagtgcgtac cgatgaccga accaaatgac acgattggta aatcgctacc gacacctgct
    12481 tcttccaact gctgtttaaa gttttcagcc ttctgaggtg cgttggcgtg tatgatagca
    12541 atctgatact gtccttcggt cgtttgttct tggaggattt ccaagagtcg cttaatggcc
    12601 ttcttctccg tccgaacttt ttcatacact tcaatcttac cctcacctgt aaaatacaga
    12661 atcggtttga tgctcaaaag attgccaagc aaggctgcac cattggacaa gcgaccacct
    12721 tttaccaaat gattgaggtc atcaaccatg atgaaggctg tagtcttccc gatttcttgg
    12781 tccaatttcc cagtaatctc ttcaaaacta agtcctgcat cagcccattt gagaacattt
    12841 tcgaccatca tgcctaaagg agccgatgtg attttggtat ctggaaaggc aacggttaat
    12901 ccttcaaatt catcagccaa atattgaata ttttgataaa aacctgaaat acctgatgac
    12961 aagaataagc caagtgcgtg tgtatagcct ttctctgtta atttagccag aatttcttct
    13021 agttccatca aactcggttg acttgtttta ggtaattctt tcgatgaagc cattttttga
    13081 taaaactctt caaccgtcaa attttgccct tcgatataat tttccccatc gatgctgact
    13141 ggaatactta ggacaaacag gtcatcccgc tcaatacttt gaacattcaa aacagccgat
    13201 gagtcagtta taactgctaa tttcatatta aaactccaaa ttcactcctg gtgcatcaaa
    13261 ggcgatttca gtaacctcat aagtcattcg ttttaaaatg tccaaaagag gctctaccaa
    13321 gacacgtttt tcctcatcag taaattcagt tggctcttct accaatcgat ttggcaagtg
    13381 aacggcctga ctcatggcac ctgaaatcac aaaatgatct agtacaatca taaagcgcaa
    13441 aatggtaatc atagatgttc gattttccgc acgattttgc tcaatcaatt gaaagtcaac
    13501 tttcaatttt gtttccggaa ttccgttctc tttttcccac gcgtgattgc gggcatcaaa
    13561 atgatactga ttgacaaatt ctttatcgcg aatgatttcc atttcaagac tcctctaata
    13621 acaataatac tcacattata ccataatcct cgtaaaatag ctaaaaaacc ttgctagaag
    13681 caaggtttca atcaaaatta tttagcttta cgaagtgctc cgtaaaggac acctgataca
    13741 accgcaccaa tcaaaacata ggcgatgtaa agcaatggat tagatgtcaa agcgataacg
    13801 aagataccac cgtgaggagc catcaattgg atgcctgaca aaccaaccaa ggcacctgca
    13861 agggcagaac cagcgataaa gcttgggatt gcacgagctg ggtcagcagc accaaatgga
    13921 atcgcacctt cagtgatgaa tgaaagaccc ataacaatgt ttgtcaaacc agagttacgc
    13981 tcttcttgtg tgaatttgtc tttgaaaaga agggttgcaa cgaatactgc caacggtgga
    14041 accataccac ctgccattac cgctgccatg gcaacagaac caccatctgc aacagtcgct
    14101 gcaagtgtac ctgtaccgaa gacataagct gccttgttga ctggaccacc catatcgact
    14161 gccatcatac caccgaggac aaggccgagg agaatagcag agctaccttc aagacctgca
    14221 aggaagttgt tcatacctgt gttgatagct gccattggga tgttaacgaa gaacatcaag
    14281 aaaccagtga tagctgtacc caaaagtggc aagagcaaga ttgcattcaa accttggagt
    14341 gattttggca tattacgcaa agcgttgcga agaacaagaa ctacaccacc agcaaggaaa
    14401 ccaccaacaa gggcacccaa gaaaccagat gatacacctg caagagcaag cgtttcttca
    14461 ccaccagctg cgtaaggaat tttaccgaac gcaagaccgc tactagcaat tgcaccagct
    14521 acgaaacctg caaccaaacc tggtttttca gcgattgagt aagcaatgta acctgctaga
    14581 agtggcaaca tgaagccgaa ggctgctcca ccgatcttca tgaacatagc tgcgatttca
    14641 tggtatgaac caagactacc aaggctgtct tgtggcacac ctagagctcc atcgaatagg
    14701 aaggcaaggg caatcaagat accgccaccg ataacgaatg gcaacatttg agacacacca
    14761 ctcatcaagt gtttatagaa cgctttacca agactgagtt tttctgaaga ttccacagta
    14821 gctgctcctt ctgacgctgt ataagctgat gctttacctt ccaagataag gttaatcaat
    14881 tcttctggtt gtttgatacc agctgcaact ggacgagata ccaatggctt accattgaaa
    14941 cgaggcatat caacagcctt atctgctgcg atgataacac cagcagcatt cttgatgtct
    15001 tcagcggtta gtttgtttcc aacacctgaa gcaccgttgg tttcaacctt gatgtcaaca
    15061 cccatctcag cagcttgttt cttaagtgct tcttctgcca tgtaagtgtg ggcaatacct
    15121 gttgtacatg ctgtaacagc aacgataaat ggacggtcac cacttggtgc tgcaaccact
    15181 tcttcagtcg ccttatctgc tgcttcagct gcgtcaaata ctgaaatgac ttcttctggg
    15241 ctagacacac cacgaagttt gtcagcaaat ccaggcttca tcaagtattt agacaattca
    15301 gcaagggcag ccaagtgtgt atcgtttgca ccttctggag ctgcaatcat gaagaacaaa
    15361 tcggttggtt gaccatcaag actcgcgtag tcaacgccct tatttgattt agcaaagaga
    15421 acagtcgctt cttttacagc cgcattctta gcgtgtggca ttgcgatacc gtcaccaaga
    15481 ccagtagttg tttgcgcttc acggttcatg atacctgttt tgaatacgtc aaaatccgtt
    15541 acataacctt tatcaaccaa actagcaatc atttcatcga taactgcttc tttgcttgtc
    15601 gcttgcaaat caagcaacat gacatctttt ctcaaaacgt cttgaatttt catagtgttt
    15661 ctacctcaac tttttcataa gtttccttaa taaattcgat acttgccaaa tcatctgaaa
    15721 aggctgttgc cgtaccgcaa gcaactcccc atttgagggc ttcaattggg tcttgtgagc
    15781 gaacgtattc acctgtaaaa cctgccacca tggaatctcc agctccgaca gagtttttca
    15841 ctgtaccctt gattggtttg gcaaagtaag tagctgctgg agtgaccaac aaagccccat
    15901 cccctgccat agaaatgatc acattctgag cacccatttc taagattttc ttagcgtagg
    15961 tctcgatgtc tgcaatgcca ttcaactcga cgttgaagat tgcttcaagt tcatggttgt
    16021 ttggcttgac caagagtggc tggtgtgcta gtgagtctag gagtgtttga ccttcaaagt
    16081 cacagaccac ttgcgctcct gcttttttag ctacaggaat cagcctattg tagacttcgt
    16141 ttccaagact agctggagca gacccagcaa agacaacggt gtcttctttg gtcaatcctg
    16201 ctaagaccat ttctaattcg gccaactgtg tatctgtcac aatcggacct aaaccgttga
    16261 tttctgtttc ttggtcagct ttgattttca cgttaatacg tgtatcttga tcaacctgaa
    16321 caaaatctgt atcaattcct tcggcaatca atccatcttt gatgaactga cctgtgaatc
    16381 ccccaaggaa acccgttgct gtattcggat agcccaagcg cttcaaaaca cggctaacgt
    16441 taattccctt accgccggca tacttatcgt cgctctccat acgattgaca ctgcctgttt
    16501 caactctatc aagtcgaacg atatagtcaa tcgctggatt gagcgtaact gtataaatca
    16561 tacctcgatt accctcgttt tctcttttat gatgtccaac aaactgcttt ctgaagattg
    16621 gcagataatg ttggattttt cgattgccgc aactttaaca aaggagaatt gaccaatttt
    16681 agaagcatct gccaaaacat agctttcttt agcattgtct atgatagtgc gtttgatggt
    16741 cgcttcttca atatctggcg ttgtaaaata gtttttatca ataccattca tccccagaaa
    16801 tgccttatca aaattgagtt gtcgaatttg ttccaatgcc actgctccaa cggaggcatc
    16861 tgttgattgc ttaacaaaac cacctataat gattgttttt atcttgcgtt caaccagcct
    16921 cactgcgtgg tgaatagaat tggtaacgac tgtcagattt tcctgctgaa gataatcaat
    16981 cagtacaccg gttgttgtac ctgcatctaa aaaaattacg tctccgttaa caatttgtcg
    17041 agcagctctt tccgcaatct ctcgtttttc ttgaacgttt ttgacagatt tttctagaat
    17101 ggactcttcg agttgcaaat tccctggcgc ttcagcacca ccgtgtacac gacgaagctt
    17161 accttcgttt tccaactcgt ccaaatccct acgtacagta gactcagatg tatcaagaac
    17221 ttcgattaat tcctctagcc gaacaaactg ttgagagtgt attcgctcca atataatctg
    17281 ttttcgttct gatttgagta tgtccaacac ctcctgcaat cgttta
//
LOCUS       DBNFCX010000043        16746 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.043, whole genome shotgun sequence.
ACCESSION   DBNFCX010000043 DBNFCX010000000
VERSION     DBNFCX010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 16746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16746
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.043"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(16..2289)
                     /locus_tag="AC1PJC_001279"
     CDS             complement(16..2289)
                     /locus_tag="AC1PJC_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014387064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed RNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage/plasmid primase, P4 family"
                     /protein_id="HIP6620267.1"
                     /translation="MFTIYSADVTGNPGNCSYPHKTIVLDVASLKTAISHDYVCAEYK
                     NNYRNGDNFIGSDCLPVDCDNDHSENPDDWVTPEDVMQAFPGVTFAVHFSRFNNKEKN
                     GKPARPKFHVLFPIDYVCDATLYSDMKKLVNSIFPYFDTQALDAARFFFGTASADVAL
                     YPGRMNLTAFLDEDLFDEDMEDGQYDGSIIPEGSRNATMSRFAGRVIKKYGDGDKAYQ
                     AFLEEAAKCVPPLDNSELATIWHSAQRFFARVAQQDGYVAPEVYNDPSCYKPEDYSDV
                     GQAEVLAKYFSNELRYSPATHFIRYSDHYWQESEPGAQAVAHELTRRQMKEANNDLME
                     ALDKIKNCGAQNILDSTSKSKAEQLMNEEQLQVYQEFLAAKAYLNFAIKRRDSKNVTS
                     TLKESHPMLEISPRDLDADCFALCTPEATYDLRKGIAGAREHSAEDFITKITSVSPSQ
                     KGMPIWLDSLNLIFQHNQELINYVQMICGLAAIGKVYVEALIIAYGDGRNGKSTFWNA
                     ISRVLGLYSGNISADTLTVGCRRNIKPEMAEVKGKRLLIAAEMQEGARLNDSTVKQLC
                     STDDVFAEKKYKDPFSFKPCHTLVLYTNHLPRVSASDDGIWRRLIVIPFNAKITGSSD
                     IKNYSEYLYDNAGEAILAWVIEGAKKVIELDYQIPVPACVQDAINEYRSQNDWFSHFL
                     EDKCDVGSEYKESSSALYQAYRNYCMDTNEYVRSTADFYFALENAGYERITQNRKRYF
                     KGLRIRSEDDFEEEFLD"
     gene            complement(2289..2621)
                     /locus_tag="AC1PJC_001280"
     CDS             complement(2289..2621)
                     /locus_tag="AC1PJC_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008978728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620268.1"
                     /translation="MYEIRENRRRLKDGTEITTYSRDIYSCNILEVEAGSTGYMGGDT
                     GHGGRTYFRIKDEGCTDMDVRVMRDRFGDTEGFEVMLGGDCELETMIRALKFITKVLE
                     DSAEEVYD"
     gene            complement(2626..3045)
                     /locus_tag="AC1PJC_001281"
     CDS             complement(2626..3045)
                     /locus_tag="AC1PJC_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014018027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620269.1"
                     /translation="MSISKYNNEGYPDPTAHGALEIIEQEEHALRAFRPIVYICSPYA
                     GDIEANIAAARRYSRFAVDAGYIPIAPHLLFPQFLDDANPKERELGLFFGNALMSKCS
                     EVWIFGSRISEGMKAEINRAKWKNYRLRYFTEECQEV"
     gene            complement(3134..5074)
                     /locus_tag="AC1PJC_001282"
     CDS             complement(3134..5074)
                     /locus_tag="AC1PJC_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010753845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HIP6620270.1"
                     /translation="MKTLSIDIETYSDVQLPKTGVYRYCESDNFEILLFAYSVDSQPV
                     QVVDLACGETISEEIIAALEDDTVIKWAFNAAFERICLSRFLGYPTGTYLNPESWRCS
                     MIWAATMGLPLSLEGVGAVLGLEKQKLTEGKDLIKYFCQPCAATKANGGRTRNRPFHA
                     PDKWEAFKRYNIRDVETEMGIQHKLRKFPVPDEVWEEYHIDQEINDRGVRLDMDLVQQ
                     AIAMDTRSREELTAAMKDMTALENPNSVQQMKQWLSDNGIETDSLDKKAVAELLKDAP
                     DNLADVLTLRQQLAKSSVRKYQAMEKTVCCDGRARGMFQFYGANRTGRFSGRNIQLQN
                     LPQNHLPDLSEARSLVKGGDFDSVELLYEDVPDTLSQLIRTAFIPREDALFYVADFSA
                     IEARVIAWFAGESWRQQVFEKGGDIYCASASQMFKVPVEKHGINGHLRQKGKIAELAL
                     GYGGSVGALKAMGALDMGLSEDELPALVDAWRQANPRIVEFWWAVDRAVMEAVKYKHT
                     TTDYGLTFSCKSGMLFITLPSGRKLAYVKPKIGTNKFGGSCITYEGVGGTKKWERLDS
                     YGPKFVENIVQATARDILCYAMKTLRCCSIVMHIHDELVIEADPKVSLDAICEQMGRT
                     PPWAKGLLLRADGYTTPFYKKD"
     gene            complement(5140..5316)
                     /locus_tag="AC1PJC_001283"
     CDS             complement(5140..5316)
                     /locus_tag="AC1PJC_001283"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620271.1"
                     /translation="MDNMINIANQFIVYSVCYTLIFVVYGYVFYHVFKFIAQIVIYAY
                     KKLAADWRKWRSGK"
     gene            complement(5377..5562)
                     /locus_tag="AC1PJC_001284"
     CDS             complement(5377..5562)
                     /locus_tag="AC1PJC_001284"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620272.1"
                     /translation="MEMIETILIIILLSIWLVFSVVFLITAIQNFINDRKREQREADK
                     DKRDLEYHEARMKEYRK"
     gene            complement(5577..6149)
                     /locus_tag="AC1PJC_001285"
     CDS             complement(5577..6149)
                     /locus_tag="AC1PJC_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003672028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2815 family protein"
                     /protein_id="HIP6620273.1"
                     /translation="MNKNVKVSNPMKVITGPDTRWSYANVWEPKSINGGTPKYSVSLI
                     IPKSDTKTVAKIKAAIEAAYKEGESKLKGNGKSVPALSVIKTPLRDGDLERPDDAAYA
                     NAYFVNANATSAPGIVDADRNPILTRSEVYSGVYGRASISFYAFNSSGNKGIACGLNN
                     LQKIRDGEPLGGKASAESDFASDEDDDFLD"
     gene            complement(6150..7280)
                     /locus_tag="AC1PJC_001286"
     CDS             complement(6150..7280)
                     /locus_tag="AC1PJC_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000181333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2800 domain-containing protein"
                     /protein_id="HIP6620274.1"
                     /translation="MASKAHAVLSASASHRWLHCPPSARLCETYEDKGSDYAAEGTDA
                     HELCEYKLRKSLNMKASDPTENLTWYSEEMDDCANGYASYILEQVEAAKETCADPVVL
                     IEQRVDFSRWVEQGFGTADCIIIADGTLRIIDYKHGLGVLVSAEDNPQMKCYALGALE
                     LFDDIYDIDNVSMTIYQPRRQNISTYELSKEDLYAWADEVLKPTAELAFAGDGNFLCG
                     EWCGFCKAKHECRARAEANLLLAQHDFKLPPLLEDTEIEVILSRVDELVAWASDIKEY
                     ALQQAISGKEWTGWKLVEGRSNRKYSNEAAVIEAVTDAGFDPYEKKLLGITAMQKLLG
                     KSRFDELLAAYIEKPQGKPTLVPESDKRPAMNNAKSDFMEEN"
     gene            complement(7270..7593)
                     /locus_tag="AC1PJC_001287"
     CDS             complement(7270..7593)
                     /locus_tag="AC1PJC_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009659415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HIP6620275.1"
                     /translation="MSKMSDMAMTIEELRNAAAAINEAANWLAAQFSSDADATPVAEA
                     KTEKKPELTLEEVRAVLAEKSRAGHTAAIRTLLQKYGAKKLSGVDPKHYEALLKDAEK
                     LDDGK"
     gene            complement(7905..8462)
                     /locus_tag="AC1PJC_001288"
     CDS             complement(7905..8462)
                     /locus_tag="AC1PJC_001288"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620276.1"
                     /translation="MLLYSAWKFKPTEVKDMANKDNQSQRFIYIRSLKEKVPCTEQQF
                     QEFYREATRIRKKEQYYHRCKCPKQFIWACDGDCENCEHHLGYGLLSIDAPMTEDGNT
                     LLESEELASPDLMEEVISDRILLEQLFQRLRELDPDADKIIDYWKDDCSISDREIAKR
                     LGRKQRTFADQMKKIRTELHKVRGY"
     gene            complement(8666..8857)
                     /locus_tag="AC1PJC_001289"
     CDS             complement(8666..8857)
                     /locus_tag="AC1PJC_001289"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620277.1"
                     /translation="MNYSERMMWETNIENAASRVAAEYGSAVVNSVFARYDATGLHNL
                     ASCYYSEVFADLEQIANDN"
     gene            9118..9957
                     /locus_tag="AC1PJC_001290"
     CDS             9118..9957
                     /locus_tag="AC1PJC_001290"
                     /inference="COORDINATES: protein motif:HMM:NF027484.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NBR1-Ig-like domain-containing protein"
                     /protein_id="HIP6620278.1"
                     /translation="MISIKSQEFLKDLYRYLGKQENQGVYVINFFNAAGCNTFTLPKL
                     KAHRTTQYLENERHYAKDRSVFQMRSDFPNPIDIDGLSKYLNDSLRDDSVRECMNHFG
                     IAATHEENKKVLARALALQFQRFIEADSEDVNNEVPTEYEALVNGVDNSYELRNSVLY
                     PGDNFWAEESHQKHEVNCFERFNHTWVIHNAGTVYWSGRKLVLKDANKNSPRPEAMEI
                     PIPDVGPNGIIKIATNFEARSMEGKFIVEWDMKDSKDQSCFRMSAGLNVTVNVSYRID
                     TED"
     gene            9960..10178
                     /locus_tag="AC1PJC_001291"
     CDS             9960..10178
                     /locus_tag="AC1PJC_001291"
                     /inference="COORDINATES: protein motif:HMM:NF024139.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIP6620279.1"
                     /translation="MNDNNIEKWVTLKEIQAYLGVGRETILQWIAKRNMPAYKMGRLW
                     KFKISEVDAWVHSGEAADKTDPADNKED"
     gene            10182..11777
                     /locus_tag="AC1PJC_001292"
     CDS             10182..11777
                     /locus_tag="AC1PJC_001292"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009381288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HIP6620280.1"
                     /translation="MARAAKAKKEVEVSLETVLWNCRVALRGVGTTEKNRDAVIGLVF
                     LKFAGDKFEKRRKELQEQYGDIPAFLEKPSFYNAANVFYLKETARWSYIVKNASANNI
                     AVIIDQAMADIEESNPPLKGALTLNLFATLGADKSKIKDLIDNVNQIDEKRFQEEDLI
                     GRVYEYFLQIYAASGTKEDGEFYTPACVVKLIAEMIEPYSGVVYDPCCGSGGMFVQSM
                     KFVDRHNGNRQKISVIGQESQAETWRLCKMNLAIRGIAHNLGEKNASTFTEDLHKDRK
                     VDFIMANPPFNLKGWRKEDELTDDYRWRGYSVPRASNANYAWILHMISKLDVNHGIAG
                     FLLANGALNDPDEFEIRKQLLENDKVEAIIVLPRDMFYTTDISVTLWIVNMNKKAGVV
                     NGRQLRDRTNEILFMDLRRWDNNIEEIVIDKGKKKKKTVLTDEQIAEVKKVYSAWQSV
                     DKTGYSDVAEFCQSSTIEDLRAHNYSLAPSKYIEFIDHDLDINYEEEMARIQAEMQDV
                     MKAEKKSQQMLEEAFRRIGYGID"
     gene            11764..12897
                     /locus_tag="AC1PJC_001293"
     CDS             11764..12897
                     /locus_tag="AC1PJC_001293"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000875679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HIP6620281.1"
                     /translation="MALIKLGKYIEISDLRNTEDRYNADAVVGISTQKKMISTKADLD
                     GVKLTSYKLLPPGYFAYVPDTSRRGDKMSLCFNNTKDTYIVSSISVVFYINNEDELNP
                     DYLFMYFNRPEFDRYARFNSWGSARETFDWSEMCDIEIELPPIEIQRKFAAVYVSMLE
                     NQQSYERGLEDLRTVCDGYFDKLKKDKTVIRCLGDYIEKMDAKNSENLYGESSVRGIT
                     NKKEFDDTKADIKNTDLSKFLVIPHDTFAYNSRTDGRDMLVLALNRESESVIVTWNYN
                     AFMIKKESKKQLNPEYLYAFFKRTEFDRLVRYMSWGSSQELFSWDSLCEVMIPVPEIE
                     VQNAIAEINNVYVERKSINERLKAQIKDMCPILIKGSIEEARA"
     gene            12913..16185
                     /locus_tag="AC1PJC_001294"
     CDS             12913..16185
                     /locus_tag="AC1PJC_001294"
                     /EC_number="3.1.21.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001123864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009035 - type I site-specific
                     deoxyribonuclease activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HIP6620282.1"
                     /translation="MDYFFEKGKFTEDQLEQAIVELFQLQGYTYVHGENIHRQYEDIL
                     LEDDLRTYLLSRYTDLSEVEVQKIINKIALIQASPLYLGNRETFWLVNEGFDLQRDDI
                     SKVALHVDYIDYDNPEKNIFKVVNQYSVQGERLRRPDLLVFVNGIPVTICEFKSAINE
                     DTTVHDAWEQITIRYTRDIPKLMKYCFLSVISDGANTRLGSIFTPYEYYYSWNKANDT
                     DKVANGISSLKTMIAGAFAPERLLRVIRDFVFYPDDSKKSEAIVCRYPQFFAANKMLA
                     NIKAHMRPAGDGKGGTYFGATGCGKTYTMLFLSRLIAQRDNEAFNNPTIIILADREDL
                     DTQTSELFVTATKYLHESDVRSIESRKDLEQTLKDRPSGGVYITTIQKFCENTGLLSD
                     RSNIICISDEAHRTQTSTGSKLKKTDKGVFTTYGFGHYLRASFPNATYCGFTGTPIDE
                     TIAVFGDVVDSYTMKESSDDGITVRIAYEPRLARVVLSDEQAKEIQKYYEQCAAEGSS
                     SEQIEESQRAMSKMTAILGHPDRLKKLAADIVSHYEALCSEKPEIVQKAMIVCADRPL
                     AFKVLKEILAIRPEWGEAKKAEDESQLSKEGLDKLMALPKVNMVATQGQNDEKELFEM
                     CGTKEYRKKLDKQFKNNNSNFKIAIVVDMWITGFDVPSLAVMYIDKPLQKHTLIQTIS
                     RVNRVFDGKDKGLVVDYIGIKNDMLEAVKKYGGPQESPIDELNISLGIFRNHLALIDE
                     LLVDFNATKFHTGTPLERLNCLNAAAEYVQMKKEMQTRFMGLSRRLKSAYGICFPSGE
                     LTEKETATAQFYLAIRSIIYKQTQGNAPDAEIMNRVVEDMVKEAITCTGIENIVDDHK
                     SVDLFSDDFLAELDTVKMPITKFNALLKLLRKAISAYGRTNKVKAVEFDERLRKVVEA
                     YNSRDKLVFTSEVVADFVNDLSDELIKILQDLQQDKTSFEKLGISYEEKAFYDILVKV
                     RDDHGFPYEEEKCLLLAKKIKELVDDKAQFADWSTRDDIKNQLNMDLTVLLYKNGYPP
                     EWDEEVFEKVMEQAENFKKYADVSSDAPEPAKAKIYQYAPSTSAVLKVAEEPAPYGTK
                     KN"
     gene            16197..>16746
                     /locus_tag="AC1PJC_001295"
     CDS             16197..>16746
                     /locus_tag="AC1PJC_001295"
                     /inference="COORDINATES: protein motif:HMM:NF020452.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hachiman antiphage defense system protein HamA"
                     /protein_id="HIP6620283.1"
                     /translation="MSSTIDINTTIKAGTIDSVFKEVTHSESLGLRNPAQLRLFHLKL
                     DGDTFTNEGLYKCLRKNIGQYVYSRTRIAKFKEEDDEASIGLEAMQLINEQRIKNPDS
                     FGNMLGEILLYAFFEEKLGAPKIFSKIELDSLTSESFYDGIHLLKMDDTSFQMVFGTS
                     YVEDQMDDVIDNAFLKIKNGLNQ"
BASE COUNT         4956 a         3269 c         3659 g         4862 t
ORIGIN      
        1 ttgtcataat agccattagt ctaagaattc ctcttcaaaa tcgtcctcgc ttctgatacg
       61 aaggccctta aaataacgct ttctgttctg agtaatacgt tcataacctg cattctccaa
      121 agcaaagtag aagtcagcgg tactgcgcac atactcgttg gtatccatgc agtaattacg
      181 gtaggcctga taaagtgcag aagagctttc tttatattcg ctgcccacat cgcacttatc
      241 ttcaaggaag tgagagaacc agtcattctg actacggtat tcattgatgg catcctgtac
      301 acatgcagga accggaattt gataatcaag ctcgatgacc ttcttggcac cttcgataac
      361 ccatgcgaga attgcttcac ctgcgttgtc ataaaggtat tcactgtaat tcttaatgtc
      421 gctgctgcca gtaatcttgg cattaaaagg aataacaata agtcttctcc agataccatc
      481 atcggatgca gatacacgag gtaagtgatt tgtgtaaagt accagcgtat ggcaaggctt
      541 gaaggagaag gggtctttat acttcttttc cgcaaataca tcatcggtag aacagagctg
      601 cttgacggtg gagtcgttca gtctagcacc ttcctgcatt tctgcagcga taagaagtct
      661 ctttcctttg acctcggcca tctcaggttt aatatttctg cggcatccaa ccgttaaggt
      721 gtctgcggag atgttaccgg aataaagtcc aagtacgcga gagatggcat tccagaaggt
      781 ggacttacca ttacgaccat caccataagc aatgatgagt gcttctacat atactttgcc
      841 gatagctgca agaccacaaa tcatctgtac ataattgatg agttcctgat tgtgctggaa
      901 aataagattc aagctgtcca accatatagg catacctttt tggcttggtg ataccgatgt
      961 gattttggta atgaagtctt ctgcagagtg ttcacgtgct ccggcgatac ctttacgaag
     1021 gtcgtaggta gcttccggtg tgcaaagggc gaagcaatct gcatctaagt ccctcggtga
     1081 aatctcaagc ataggatgtg attcctttaa ggttgaagtg acattcttgg aatcgcgacg
     1141 cttaatagca aagttcaaat atgctttagc agcaagaaac tcctgataaa cctgaagctg
     1201 ttcttcattc attagctgtt cggccttgga cttggatgtg ctgtcaagga tgttctgagc
     1261 accacagttt tttattttgt cgagtgcttc catcaaatcg ttgttagctt ctttcatctg
     1321 acgacgggta agctcatgcg caacagcctg tgcacccggt tcgctttcct gccaatagtg
     1381 gtctgagtaa cgaatgaagt gcgtagccgg agagtagcga agttcatttg agaagtattt
     1441 tgctaaaact tctgcctgac caacatcgga ataatcctct ggtttataac aagaagggtc
     1501 gttatatact tctggagcaa catagccatc ctgctgagcc acacgagcga agaatctctg
     1561 tgcgctgtgc cagatagtag ctaattcact attatcaagt ggtggtacgc atttagcagc
     1621 ttcttcaaga aaggcctgat aagctttatc gccatcacca tattttttga tgacacgacc
     1681 ggcgaatctg gacatggtag cattacgact tccttcagga atgattgagc catcgtattg
     1741 accgtcttcc atatcttcgt cgaataaatc ttcatccaga aacgctgtta aattcatacg
     1801 tcccggatac aaagcaacat ctgctgaagc ggttccgaag aagaaacgag ctgcatccag
     1861 cgcctgtgta tcaaagtaag gaaagatgga atttactagt ttcttcatat cgctgtagag
     1921 cgtagcatcg catacataat cgattggaaa taatacatgg aactttggtc tagcaggctt
     1981 gccattcttt tctttgttat tgaaacgact gaagtggact gcgaatgtta cacccggaaa
     2041 cgcctgcatg acatcttcag gtgtgaccca atcatcagga ttttcagagt ggtcattatc
     2101 acaatctaca ggtaagcagt cgctgccgat gaagttatct ccattacgat agttgttttt
     2161 atattcagca catacatagt catggctgat tgctgtttta agactggcta catctaagac
     2221 aatggtcttg tgagggtagg aacagttacc cggattgcca gtcacatctg cgctatagat
     2281 agtaaacatt agtcgtatac ctcctctgca gaatcttcca gaaccttagt gatgaacttc
     2341 aaagcacgaa tcattgtttc aagctcacag tcgccaccaa gcataacctc aaaaccttct
     2401 gtatcaccaa agcggtcacg cataacacga acatccatat cggtacaacc ttcatctttg
     2461 atgcggaagt aggtgcgacc accatgacct gtatcgcctc ccatataacc agtagagcct
     2521 gcttcaactt ctaagatgtt gcagctatag atatcacgtg aataggtagt aatttctgtt
     2581 ccatctttta atctgcgtct gttttctcta atttcataca tagtcttaaa cctcctgaca
     2641 ttcttctgtg aaatagcgca agcggtagtt tttccacttg gcgcggttga tttctgcttt
     2701 cattccttct gaaatgcgac taccaaatat ccaaacttca gaacacttac tcatcagagc
     2761 gtttccgaaa aacaagccaa gctcacgttc ttttggattt gcatcatcaa ggaattgtgg
     2821 gaaaagcaaa tgtggagcta tcggaatata tccggcatcc acagcgaatc gactgtatcg
     2881 tcttgcagca gctatgtttg cttcaatatc acctgcatag ggcgaacaga tatagacgat
     2941 aggcctgaaa gcacgaaggg catgttcttc ctgttcaata atctccaatg caccgtgtgc
     3001 tgttgggtca ggataacctt cgttgttgta tttactgatg ctcataccag agtcctcctt
     3061 tccggcagac ataaaaagag cgtccacctc taatttccca ctggagatga acgctcgatt
     3121 tgagcggaat tatttaatct tttttgtaaa agggtgtggt gtatccgtca gcacgaagaa
     3181 gtaagccttt agcccaaggt ggtgttcggc ccatctgttc acagatagca tcaagagata
     3241 ccttcgggtc agcttcaata acaagctcat catggatatg catcacaatg gaacaacagc
     3301 gtagtgtttt catggcatag cataaaatat cacgcgcagt tgcctgcaca atattctcta
     3361 cgaactttgg cccataggaa tcaagacgtt cccatttctt agtgccacca actccttcat
     3421 aggtgatgca ggaaccgccg aacttattgg ttccgatttt tggtttcacg taagcgagct
     3481 ttctgccgga aggaagggtg atgaacagca taccgctttt gcaagagaag gtcagaccat
     3541 aatctgttgt ggtatgttta tatttgactg cttccataac agcacggtcg actgcccacc
     3601 agaattcaac gatacgaggg ttggcttgtc tccatgcatc cacaagagca ggaagttcat
     3661 cttcactaag gcccatatca agagctccca tcgcttttag ggcaccgaca ctgcctccat
     3721 agccaagtgc taattctgca atcttaccct tttgacgtaa gtgaccattg attccgtgct
     3781 tttcaaccgg aaccttaaac atctgagaag cagaagcaca atagatgtca ccaccttttt
     3841 caaagacctg ctgcctccaa gattcacctg caaaccatgc gataacacgt gcttcaatag
     3901 cagagaagtc cgcaacataa aagagcgcat cttctctagg aataaatgca gttctaataa
     3961 gctgagataa ggtatctggt acatcttcat ataaaagttc aacgctatca aaatcaccgc
     4021 cttttacaag acttcttgct tctgataaat caggtaggtg gttttgtgga aggttctgca
     4081 actggatatt acgaccggag aatctaccgg ttctgttagc tccatagaat tggaacatcc
     4141 cacgagcacg gccatcgcag cagacagttt tctccatagc ctgatattta cgcacagatg
     4201 attttgcaag ctgctgacga agggtaagta catcggcaag attatccggt gcatccttta
     4261 atagttcagc cacagccttc ttatcaagac tatctgtttc gatgccatta tctgataacc
     4321 attgcttcat ctgctggacg gagtttggat tttcgagtgc agtcatatct ttcatggcag
     4381 cagttaactc ttcacgggag cgcgtatcca ttgcaattgc ctgctgcacc aagtccatat
     4441 caagtctgac accacggtcg ttgatttctt ggtcgatatg gtattcctcc catacctcat
     4501 caggcaccgg gaatttacga agcttatgct gaatgcccat ctcggtttcg acatcacgga
     4561 tgttataacg cttgaaggct tcccatttat caggtgcgtg aaaagggcga ttccttgttc
     4621 tgccaccatt agcctttgtt gcagcacaag gttggcagaa atatttgatg aggtcttttc
     4681 cctctgtgag cttctgcttt tcaagaccta atacagcacc gacaccttcc agagataaag
     4741 gcagtcccat tgtggcagcc catatcatag aacagcgcca gctttcagga ttaagataag
     4801 taccggtagg gtacccaaga aatctcgaaa gacagatacg ttcaaaggct gcattgaagg
     4861 cccacttgat aacagtatca tcttcaagtg ctgcaattat ctcttccgag atagtttcac
     4921 cacaagctag gtcaaccacc tgaacaggct gactatcgac actgtaggcg aagagtaata
     4981 tttcaaaatt atcggactcg cagtaacgat acacaccagt ctttggaagc tgtacatcac
     5041 tgtaagtctc gatatcaata cttaatgttt tcattagctt gtcctttcta taacacaagc
     5101 ggcagagagg ttgtgttcct tcctgccgcc tgcttgatgc tatttaccag agcgccattt
     5161 acgccagtca gctgcaagtt tcttatatgc atagattaca atctgtgcaa tgaacttgaa
     5221 cacgtgatag aacacatatc catagaccac gaaaataaga gtgtagcaga cggagtaaac
     5281 aataaactgg tttgcaatat taatcatatt atccattgat tgtcacctcg ttttcaaagt
     5341 cccggagatg actggatgcc acctccggtt gggtatttat tttctgtatt ccttcatacg
     5401 agcttcgtga tattcaaggt cacgtttgtc cttgtcagct tcgcgctgtt cacgcttgcg
     5461 gtcgttgatg aagttctgga tagcagtgat aaggaatacc acgctaaata caagccagat
     5521 agaaagaagg atgatgataa ggatagtttc aatcatttcc atagtcggca cctccattaa
     5581 tcaaggaaat cgtcatcttc atcagatgcg aaatcagact cagcacttgc tttaccacca
     5641 agaggttcac catcgcgaat cttctgtaag ttgttaagac cgcaggcgat tcccttatta
     5701 ccagagctgt tgaatgcgta gaagctgatg ctggcacgac cgtaaacacc ggaataaacc
     5761 tcagagcgag taaggatagg gttgcggtct gcatctacga tacccggtgc agatgttgcg
     5821 ttggcgttga cgaagtatgc attcgcataa gctgcatcat caggtctttc aaggtcacca
     5881 tcacgaagcg gagtcttgat gacagaaaga gcaggaacag acttaccgtt gcccttaagc
     5941 ttgctttcac cttctttgta agcagcttcg atagcagctt taatctttgc aacagtcttt
     6001 gtgtcagact tggggatgat aagagatacg ctgtacttag gtgtacctcc attgattgac
     6061 ttaggctccc atacgttagc gtaagaccaa cgagtgtcag ggccagtgat taccttcata
     6121 ggattagata cttttacatt cttgttcatt taattttcct ccataaaatc agattttgcg
     6181 ttgttcatag ccgggcgctt atcgctttcc ggtacgagag taggtttgcc ttgcggcttt
     6241 tcgatgtagg ctgcaagaag ttcatcgaag cgagatttac ctaaaagctt ctgcatggca
     6301 gtgatgccaa ggagcttctt ttcgtaaggg tcaaatccag catctgtgac tgcttcaatg
     6361 actgcagctt catttgagta cttgcggtta gaacgacctt cgactaactt ccaaccagtc
     6421 cattctttac cgctgatagc ctgctgaaga gcgtattcct tgatatcgga tgcccatgct
     6481 acaagctcat ccacacgaga taagatgact tcaatttctg tatcttccaa cagcggtgga
     6541 agcttgaaat catgctgtgc aagcagaaga ttagcttcag ctctggcgcg acattcatgt
     6601 ttggctttac agaaaccaca ccattctcca caaaggaaat taccatcacc ggcaaaggca
     6661 agttctgcag taggcttcaa cacttcatcg gcccaagcgt ataaatcttc tttgcttaat
     6721 tcataggtag agatgttctg acgacgaggc tgatagatgg tcatgctaac gttatcaatg
     6781 tcatagatgt catcgaacaa ttccagagcg ccaagtgcat agcatttcat ctgtgggtta
     6841 tcttcagctg atacaagaac accaagcccg tgcttgtaat caatgatgcg aagagtacca
     6901 tctgcgatga tgatgcagtc ggcagttcca aatccctgtt caacccagcg tgagaaatca
     6961 actctctgtt caattaagac tacagggtct gcgcaggttt ctttcgcggc ttctacctgt
     7021 tcaaggatgt aggatgcata gccattagcg cagtcatcca tttcctcgct gtaccatgtt
     7081 aagttttcag tagggtctga agctttcatg tttaaggatt tacgaagctt gtactcgcaa
     7141 agctcatgag catcagtacc ttcggcagca tagtcgctac ctttgtcttc ataggtttca
     7201 cataaccttg ctgaaggtgg acagtgaagc cagcgatgtg atgctgaagc ggataagacc
     7261 gcatgtgctt tacttgccat catccagttt ctccgcatcc tttaacaagg cttcatagtg
     7321 tttagggtct acaccggata acttcttagc tccatatttc tgaagcagag tacggatagc
     7381 agctgtatgt cctgcacgag acttttctgc taagacagca cgtacctctt ctaatgtaag
     7441 ttccggtttc ttttctgttt ttgcttctgc taccggagtc gcatcagcat ctgagctaaa
     7501 ctgtgcagct aaccaattgg ctgcttcatt aatagcagcg gctgcattgc gtaactcttc
     7561 gatagtcata gccatatcgc tcattttgct catggtgaat ttctccttcc ttagattgtc
     7621 tttgctttgc gaggattgtc atatttctcg ccattcttgc tgatacctga ctgattgctt
     7681 taagtactgc aatcacttca gcgtcggtac caccggaatc gaagtagtgt tctctcatcg
     7741 tcgtcacctc ccatctgtgt tagttgcaag gcttgttgtt tcgtgcctta cactttccca
     7801 ctggagagag ggcaccgatt tgagcggaga aattttgaaa aaagtaaaaa tccctctgac
     7861 tatcttttga tggacagcca gagggatgag ttgctaccta tatattagta gccgcgaacc
     7921 ttatgaagtt cggttctgat tttcttcatc tggtcagcaa aggtacgctg tttacgaccc
     7981 aagcgtttag caatttctct gtcggagata gagcagtcgt ctttccagta atcgataatc
     8041 ttgtccgcat ccgggtcaag ctctcttaaa cgctggaaga gctgctctaa taagattctg
     8101 tcgctgataa cttcttccat taagtcagga gaagcgagtt cctctgattc aagaagtgtg
     8161 tttccatctt cagtcattgg tgcatcaata gaaagaagcc cataacctaa atgatgttca
     8221 cagttctcac aatcaccatc acaggcccag ataaactgct tagggcactt gcaacgatgg
     8281 tagtactgtt ccttcttacg gatgcgagtt gcttcacgat agaattcctg aaattgctgt
     8341 tcagtacaag gaaccttctc cttgagtgaa cgaatgtaga tgaatctttg actctgattg
     8401 tctttgtttg ccatgtcttt tacctccgtt ggcttgaatt tccaagcgga gtaaagaagc
     8461 atggctgcca gtattaatat tcatagttgg tcacctcatg cggatagctc cgctttgttt
     8521 ctggtgacca gctcgtttgc taagctggca ctgtatttac ttgtgagacc tttctatcaa
     8581 ttgcaaacac accacgtggc cacgaagatg gtgaattgat agttgggcca gacagtttaa
     8641 cgtcttgtcc gggacggtta cttatttaat tgtcatttgc tatctgctct aaatctgcga
     8701 agacttcgct gtagtagcag gaagctaagt tgtgtaatcc tgttgcgtca tatcttgcaa
     8761 agactgaatt aacaacagcg gaaccatatt cggctgccac tcttgaagcg gcattctcga
     8821 tgttggtttc ccacatcatt cgttctgaat aattcatttg aatcaccact ttctgttaat
     8881 ttgtgaattg gttaagtgat ttaaagtgga tttataagta tttatatctc gtattagccc
     8941 gtaagattga tttttacaaa tcttcgtgat ataatattca atggattttt gtacttaagc
     9001 cactcggcgc cttccttatc caaagcacat tattaaagta cactttcgat taggtacggc
     9061 tctatgagcc agacgtggtg aattaggtac agtaggtaca agactaggta caggcaggtg
     9121 attagcatta aaagtcagga atttttgaaa gatttgtata gatatctggg taagcaagag
     9181 aaccaaggcg tgtatgttat taactttttt aatgcagcag gttgcaatac attcaccttg
     9241 ccaaaactca aagcacatag aacaacacag tacttagaaa atgaaagaca ttatgctaaa
     9301 gaccgttctg tgtttcagat gagaagcgat tttccaaatc cgatagacat tgatggatta
     9361 tctaaatatc tgaatgattc tctaagagat gattctgtta gagaatgcat gaaccatttt
     9421 ggaatagcag ctacgcacga agaaaataaa aaggtattag cacgtgcatt agctttgcaa
     9481 tttcaaagat ttattgaagc tgattcagaa gatgttaata atgaggttcc tactgagtac
     9541 gaagctcttg ttaatggagt ggataatagc tacgaactgc gaaacagtgt tttatatccg
     9601 ggagataact tctgggctga agaaagccat cagaaacacg aagtgaactg ttttgaaaga
     9661 tttaatcata cttgggtgat tcataatgcc ggaacagtgt attggagcgg aagaaaactt
     9721 gtcttgaagg atgcaaacaa aaatagccct cgtccagaag cgatggaaat accgattcca
     9781 gacgttgggc caaacggaat tataaaaata gctacgaact ttgaagctcg cagcatggaa
     9841 ggaaagttta ttgttgagtg ggatatgaaa gactcaaaag accagtcttg ttttagaatg
     9901 agcgctggct taaatgtgac tgtaaatgtg tcatacagaa tagatacgga ggactaattg
     9961 tgaacgataa caacattgaa aaatgggtaa cccttaaaga gattcaggca tatttgggtg
    10021 taggacgaga gaccattttg cagtggatag caaaaagaaa tatgccagca tataagatgg
    10081 gcagattatg gaaatttaaa atatcagaag ttgatgcgtg ggtacactct ggagaagcag
    10141 ctgataaaac tgacccggca gataacaagg aggattaaac aatggcaaga gcagcaaaag
    10201 ctaaaaaaga agtggaagtt tcattagaga ccgtcctttg gaattgccga gtagcacttc
    10261 gaggagtagg tacaacagaa aagaaccgtg atgcagtaat tggattagta ttcttaaagt
    10321 ttgcaggtga caaatttgag aaacgtcgta aggaacttca ggagcagtat ggtgacattc
    10381 cagcttttct tgaaaagcct tcattttata acgcagcaaa tgtgttctat ttaaaagaaa
    10441 cagctagatg gtcatatatt gttaagaatg catctgcaaa taatattgca gttattatcg
    10501 accaagcaat ggcagatatt gaagaaagca atccacctct taaaggtgca ttgacattaa
    10561 acttatttgc aacactcggt gcggataaat caaagattaa agaccttatt gataatgtaa
    10621 atcagattga tgagaagaga ttccaagaag aagaccttat tggtcgtgtt tacgaatact
    10681 tccttcagat ttatgcagct tccggaacaa aggaagatgg tgaattctat actcctgcat
    10741 gtgttgtaaa actgattgca gagatgattg agccttacag tggtgttgtt tatgaccctt
    10801 gctgtggttc tggtggtatg ttcgttcaga gcatgaagtt tgttgaccgt cataatggaa
    10861 accgtcagaa gatttctgtt attggtcagg aaagtcaggc tgagacttgg cgtctttgta
    10921 agatgaatct tgcaatcaga ggtattgcgc ataatctcgg tgaaaagaat gcatcaacat
    10981 ttacagaaga tcttcataaa gataggaagg ttgatttcat catggctaat ccacctttta
    11041 atcttaaggg atggagaaaa gaagatgaat tgacggatga ttatcgttgg agaggttata
    11101 gtgttcctcg tgcttcaaat gctaactatg cttggatttt acatatgatt tctaagcttg
    11161 atgttaatca tggaatcgca ggtttccttc ttgccaatgg tgcattgaat gaccctgacg
    11221 aatttgaaat tagaaagcag cttcttgaaa atgataaagt ggaagcaatt attgttcttc
    11281 caagagatat gttctacaca acagacattt cagttactct ctggattgta aacatgaata
    11341 agaaggctgg cgttgttaat ggccgtcagc ttcgtgacag aacaaatgaa attctgttta
    11401 tggatttaag acgttgggat aacaatattg aagaaattgt aattgataaa ggtaagaaaa
    11461 agaagaagac agtacttacc gatgagcaga ttgcagaagt taagaaagtt tatagtgctt
    11521 ggcaaagtgt tgataaaacc ggttatagtg atgtggctga attctgccag tcatcaacta
    11581 tcgaagattt gcgcgcacat aattattcac ttgcaccaag taaatatatt gaatttatcg
    11641 accatgactt agatattaat tatgaagaag aaatggctcg tattcaggct gaaatgcagg
    11701 atgttatgaa ggccgaaaag aaatcccagc agatgctgga ggaagcattt aggaggattg
    11761 gatatggcat tgattaaatt aggtaagtat atagaaataa gtgacttaag aaatactgaa
    11821 gacagatata atgcagatgc cgttgtggga atttcgacac aaaaaaagat gatttctaca
    11881 aaggcagatt tggatggtgt aaagcttact tcctacaagt tgctaccgcc gggatatttt
    11941 gcatacgtgc ctgacacttc gagacgcgga gacaaaatgt ctttatgctt caacaacaca
    12001 aaggatacgt atattgtttc gtccatatct gttgtgtttt atatcaataa tgaagatgaa
    12061 ttgaatcctg attatctatt catgtatttt aacagaccag agtttgatag gtatgctcgt
    12121 ttcaattcgt ggggctctgc tagagaaact tttgattgga gcgaaatgtg tgatattgaa
    12181 atcgagctac ctcctattga aatccagcga aaattcgctg ccgtatatgt ttctatgctt
    12241 gaaaaccagc aaagttatga acgtggtttg gaggatttga gaactgtatg tgatggttac
    12301 tttgacaagc tgaaaaaaga taaaacagta ataagatgtc ttggcgatta tatagaaaaa
    12361 atggatgcca aaaacagcga aaacttgtat ggagagagtt ctgtacgagg gataactaat
    12421 aaaaaagagt ttgatgatac aaaggcggat ataaaaaata ctgacctgtc aaaattcctt
    12481 gttatcccgc atgatacatt tgcttataac agcagaactg acggaagaga tatgctggtt
    12541 ttagcactta acagggagtc tgaaagtgta attgtaacat ggaattataa tgctttcatg
    12601 attaagaaag aatctaaaaa acagctgaat cctgaatatt tgtatgcgtt tttcaagaga
    12661 acagagttcg atagattagt aagatatatg tcttggggct catctcagga attgttttcg
    12721 tgggatagtt tgtgtgaggt aatgatacct gttccggaaa tagaagttca aaatgcaatt
    12781 gctgaaatca acaatgttta tgttgaaaga aagagtatca atgaaaggct aaaagcacaa
    12841 ataaaggata tgtgtccgat attgataaaa gggtcaatcg aagaggcccg tgcataaaag
    12901 gaggtgtcgt atatggacta cttcttcgaa aaaggtaagt tcactgaaga ccagttggag
    12961 caggccatag tcgagctgtt ccaattgcaa ggatatacct atgttcacgg tgaaaacatt
    13021 catcgtcaat acgaggatat cttgttggaa gatgacttgc gtacttattt acttagccgc
    13081 tatacagacc taagtgaagt tgaagtacaa aagattataa ataaaatagc gctgatacag
    13141 gcatcacctt tgtatctcgg taacagagaa acattctggc ttgtaaatga gggctttgat
    13201 ttgcagcgcg atgacatcag taaagttgca cttcatgttg attatattga ttatgacaat
    13261 ccggaaaaga atatctttaa ggtagtaaac caatattctg ttcagggcga aagattgcgc
    13321 agacctgatt tgctggtttt tgttaacggt attcctgtaa ccatctgtga gtttaagtct
    13381 gcaatcaatg aggatacaac tgttcatgat gcatgggagc aaatcactat ccgttacaca
    13441 cgtgatattc ctaagctgat gaaatactgc ttcttgtctg ttatcagtga tggagcgaat
    13501 acaaggctcg gtagtatctt tacaccttat gagtattatt actcatggaa taaggctaat
    13561 gatacagata aggtagctaa tggaattagc tcattgaaaa caatgattgc aggagccttt
    13621 gcaccagagc gtttgttgcg tgttatcaga gacttcgttt tctatccaga tgatagtaag
    13681 aagagcgaag ctatagtgtg tcgttatcca cagttcttcg ctgcgaataa aatgctggcg
    13741 aatattaaag cacatatgcg tcctgctggc gacggtaaag gtggtacgta ttttggcgct
    13801 actggttgtg gaaaaacata tacaatgctg ttcttatctc gattgattgc acaaagagat
    13861 aatgaagcat ttaataatcc aacgattatc atccttgctg accgtgagga tttggatact
    13921 caaacttctg aattatttgt tactgccact aagtatttac acgagagcga tgtccgaagc
    13981 attgaaagtc gtaaagactt agagcagaca ttaaaagaca ggccaagcgg cggtgtttat
    14041 atcactacta ttcaaaagtt ctgtgagaac actggactgc tttccgacag aagcaatatt
    14101 atatgcattt ccgatgaagc acatagaact cagacaagca ctggaagcaa attgaagaag
    14161 actgataagg gtgtatttac tacatatgga tttggtcatt accttcgtgc tagcttccct
    14221 aacgcaacat attgtggctt cactggaact cctatcgatg aaactatcgc tgttttcggt
    14281 gatgtagtcg atagctatac aatgaaggaa tcaagcgatg atggtattac tgtacgtatc
    14341 gcttatgaac ctcgccttgc tcgtgttgtt ttatcagatg aacaggcaaa agaaattcag
    14401 aaatattatg agcagtgtgc tgcagaaggc tcttccagtg aacagattga ggagagtcag
    14461 cgcgcgatga gtaagatgac agctatcctt ggacatccgg atagactgaa aaagctcgct
    14521 gctgacattg ttagccacta cgaagcatta tgttctgaaa aacctgagat tgtacagaag
    14581 gctatgattg tttgtgctga cagaccttta gctttcaagg tattaaaaga gatccttgct
    14641 attcgtcctg aatggggtga agcaaagaaa gctgaagatg aaagtcagct ttcaaaggaa
    14701 gggttagata aacttatggc acttcctaaa gtaaacatgg ttgcaactca gggacagaat
    14761 gatgagaaag aacttttcga gatgtgtggt accaaggaat accgtaagaa gcttgataaa
    14821 cagttcaaga ataataattc aaactttaaa atcgcaatcg ttgtggatat gtggattact
    14881 ggtttcgatg ttccatcact tgctgtgatg tatattgaca aaccgcttca gaagcatact
    14941 ttgattcaga caatttcgcg tgttaaccgt gtgtttgatg gcaaggataa aggtcttgta
    15001 gtcgattata tcggcatcaa gaacgatatg cttgaagctg ttaagaaata tggtgggcca
    15061 caggaaagtc cgattgatga gcttaacatc tcacttggaa tctttagaaa tcatcttgca
    15121 ttgatagatg aacttcttgt tgatttcaat gcgacaaaat tccacactgg aacaccactg
    15181 gaaagattga actgcttaaa tgctgcagct gaatatgttc agatgaagaa ggaaatgcag
    15241 acaagattca tgggtctttc acgacggttg aagagtgcat atggcatctg tttcccttct
    15301 ggtgagctga ctgaaaaaga gacggctaca gcacagtttt atttggctat acgttcaatt
    15361 atttataagc agactcaagg taacgctcca gatgcagaaa tcatgaaccg cgttgtagaa
    15421 gacatggtta aagaagcgat tacttgtact ggtatcgaga atattgttga cgaccataaa
    15481 tcagtagatt tatttagtga tgatttcttg gctgagctgg atacggtaaa aatgccaatt
    15541 acaaagttta atgctttact taagttgctt cgtaaggcta tctctgctta tggaagaact
    15601 aataaggtta aagcagttga atttgatgaa cgtttgcgca aagttgtaga agcctacaac
    15661 agcagagata agctggtatt taccagtgag gttgtagctg actttgtaaa tgatttgtcc
    15721 gatgaattga ttaagattct gcaggattta caacaggaca aaacatcatt tgaaaaactc
    15781 ggcatcagtt atgaagaaaa agcattctac gatattcttg taaaagtaag agatgaccac
    15841 ggtttccctt atgaagaaga aaagtgcttg ttgctcgcaa agaaaattaa agagcttgta
    15901 gatgataagg cacagtttgc tgactggtct acaagagatg acataaaaaa tcagttaaat
    15961 atggatttga cagtacttct ttataaaaat gggtatccgc ctgaatggga tgaagaagta
    16021 ttcgaaaaag ttatggaaca ggctgaaaac tttaaaaagt atgcagatgt atcttcagat
    16081 gcaccagaac ctgcaaaagc aaagatttat cagtatgctc caagtacaag tgcagttcta
    16141 aaggttgctg aggaacctgc accatatggt acgaagaaaa attgaggtga ttaaagttga
    16201 gcagtactat tgatatcaat acaactataa aagctggaac aattgattcc gtttttaaag
    16261 aggttacgca ttctgagagt cttggcttgc gtaaccctgc tcagctgcgc ctttttcatc
    16321 tgaaacttga tggagatact tttaccaacg aaggccttta taagtgcttg agaaagaata
    16381 tcggacagta tgtttattca agaacacgaa ttgctaagtt taaggaagaa gacgacgagg
    16441 caagtatagg ccttgaagca atgcagttga ttaatgagca gagaataaaa aacccggatt
    16501 cgtttggaaa catgcttgga gagattcttc tctatgcttt ctttgaggag aagcttggag
    16561 cgcctaaaat tttcagtaaa atcgaattgg attccttaac ttccgaaagt ttctatgatg
    16621 gtatccatct gttgaagatg gatgacacat cttttcagat ggtttttggc acttcttatg
    16681 ttgaagacca gatggatgat gtaattgata atgcctttct aaaaataaaa aatggactta
    16741 accaac
//
LOCUS       DBNFCX010000044        16608 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.044, whole genome shotgun sequence.
ACCESSION   DBNFCX010000044 DBNFCX010000000
VERSION     DBNFCX010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 16608)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16608)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16608
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.044"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(70..1803)
                     /gene="ptsP"
                     /locus_tag="AC1PJC_001296"
     CDS             complement(70..1803)
                     /gene="ptsP"
                     /locus_tag="AC1PJC_001296"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014294264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HIP6620284.1"
                     /translation="MTEMLKGIAASDGVAVAKAYLLVQPDLSFETVTVEDTNAEEARL
                     DAALEASQNELSVIRENAVASLGEEAAAVFDAHLMVLADPEMIGQIKETIRAKKTNAE
                     TGLKEVTDMFIAIFEGMEDNPYMQERAADIRDVAKRVLAHLLGVRLPNPATIDEESIV
                     IAHDLTPSDTAQLNKQFVKAFVTNIGGRTSHSAIMARTLEIAAVLGTNNITEIVKDGD
                     VLAVNGITGDVVINPSEEVIAEFKAAGEAYAKQKAEWALLKDAQTVTADGKHFELAAN
                     IGTPKDVEGVNDNGAEAVGLYRTEFLYMDSQDFPTEDEQYEAYKAVLEGMNGKPVVVR
                     TMDIGGDKELPYFDLPHEMNPFLGFRALRISISETGNQMFRTQLRALLRSSVHGKLRI
                     MFPMVALLTEFRAAKAILDEEKANLLAEGVAVADDIQVGIMIEIPAAAMLADQFAKEV
                     DFFSIGTNDLIQYTMAADRMNEQVSYLYQPYNPSILRLINNVIKAAHAEGKWAGMCGE
                     MAGDQQAVPLLVGMGLDEFSMSATSVLRTRSLMKKLDTAKMEEYAHRALTECATAEEV
                     LELQKEYVDFD"
     gene            complement(1808..2071)
                     /locus_tag="AC1PJC_001297"
     CDS             complement(1808..2071)
                     /locus_tag="AC1PJC_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019775469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocarrier protein HPr"
                     /protein_id="HIP6620285.1"
                     /translation="MASKDFHIVAETGIHARPATLLVQTASKFASDITLNYKEKSVNL
                     KSIMGVMSLGVGQGADVTISAEGADADDAIAAITETMEKEGLA"
     gene            complement(2227..3408)
                     /gene="icd"
                     /locus_tag="AC1PJC_001298"
     CDS             complement(2227..3408)
                     /gene="icd"
                     /locus_tag="AC1PJC_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019780541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HIP6620286.1"
                     /translation="MAEKILMREGRLIVPDCPVISYIEGDGIGRDIWSVSQKVIDAAV
                     KKAYAGQRSIQWREVLAGEKAYELTGTSLPNETLEIIREHLVAIKGPLGTPIGKGHRS
                     LNVALRQELDLYACVRPIRYFKGVPSPLKEPEKTDITIFRENTEDIYAGIEWEAGSDE
                     VAKVISFLQDEMGVVNIRFPESSSIGIKPISEEGSKRLIRSAIEYALEHQLKMVTLVH
                     KGNIQKFTEGGFRKWGYELAKEEFATELAEGTLVVNDIIADNFLQQILLAPENFQVVA
                     LTNLNGDYASDALAAQVGGIGISPGANINYQTGHAIFEATHGTAPDIAGKDLANPCSL
                     LLSACMMLEYIGWKEAAVLIIQALEDAFINKNVTLDFAKILDVAHQSTSQFSEVLIDS
                     I"
     gene            complement(3411..4529)
                     /locus_tag="AC1PJC_001299"
     CDS             complement(3411..4529)
                     /locus_tag="AC1PJC_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HIP6620287.1"
                     /translation="MTETNGLKDAIACDTRISAIENDRLSYAGYDIAELMENNASFEE
                     VIYLLWNLHLPTQIELNYFEKSLRKEYAISDAVEQCILIQSRRHLHPMSVLRSTVSLL
                     GVYNVHAEENSLEALYEQSIQIMAKVPTIIATFARLRRGLVPIEPRSDLGFAANFLYM
                     LNGEEPSDLQIKAFNKALVLHADHELNASTFAARVTASTLTDLYSCVTAAIGTLKGSL
                     HGGANERVFDMLLAIRESGDTERYLQKKLDSKEKIMGFGHRVYKTVDPRQEYLKEMAR
                     DLTFGTDDEAFYRLSEEVESFIKNKKGLIPNVDFYSATVYHVLGIDSDIFTLIFAMSR
                     MAGWIAHVQEQRKNNKLIRPRSSYLGGRNLVYIPIGKR"
     gene            complement(4526..7195)
                     /gene="acnA"
                     /locus_tag="AC1PJC_001300"
     CDS             complement(4526..7195)
                     /gene="acnA"
                     /locus_tag="AC1PJC_001300"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HIP6620288.1"
                     /translation="MEKSHIKRLVHKGKEYSYYALDSISMEEKVDIHSLPYTIRILLE
                     SLLRKEDGVDVTKNHIMELLHYQAASPKGEIPFKPSRVILQDFTGVPVVVDLASMRDA
                     VVKAGGNPELINPEIPVDLVIDHSVQVDFFGTEDALEKNITLEFERNNERYEFLKWAE
                     NSFENYRAVPPATGIIHQVNIEFLSDVIINKDGLLYPDSMFGTDSHTTMINGIGVLGW
                     GVGGIEAEAAMLGEASYFPVPEVIGVRLAGQLPKVATATDLALKVTQLLRQENVVGKF
                     VEFFGPGLSSLTLADRATVSNMAPEYGATCGYFPIDGETLHYMRLTNRSEEHVELTEA
                     YAKANYLFYDAERFPSYSKVLELDLSTVVPSISGPKRPQDLIELTDAKAEFQASLIRE
                     VGVRGFGLEKAELDKTATVKYVEGDEQIQTGHVAIAAITSCTNTSNPYVLLAAGLLAK
                     NAVEKGLAVSKTVKTSLAPGSKVVTGYLKKSGLQTYLDALGFNLVGYGCTTCIGNSGD
                     LRPEVAEAIKGEDLLVSAVLSGNRNFEGRINPLVKANFLASPPLVVAYAIAGNMNVDL
                     TRDPLGYDEKQQAVYLADIMPSREEVDDYIERYVTRDLYKEEYQQVFTDSRAWNAIET
                     KTDKNYNWNSSSTYIQNPPYFDNMQADLSIKPLENLSVLAKFGDSVTTDHISPAGNIA
                     RLSPAARYLEENGIVYKDFNSYGSRRGNHEVMMRGTFANIRIKNELAAGKIGGWTRVG
                     DEILSIYDAAMRYKEVDVGSIVIAGKDYGMGSSRDWAAKGSSLLGVKAVLAESFERIH
                     RSNLVMMGVLPLQFLEGQSAESLGLTGHESYTIDLPEDVGVGQIVTVHAQTDDVTKEF
                     QALVRFDAEADIRYYRHGGILPMVVRKKLGGKV"
     gene            7582..7800
                     /gene="nrdH"
                     /locus_tag="AC1PJC_001301"
     CDS             7582..7800
                     /gene="nrdH"
                     /locus_tag="AC1PJC_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin-like protein NrdH"
                     /protein_id="HIP6620289.1"
                     /translation="MVTIYSKNDCVQCKMTKKFLDQHSVDYKEINLDEQPEFIDHVKG
                     LGFSAAPVIETENDVFSGFQPGKLKALV"
     gene            7833..9992
                     /gene="nrdE"
                     /locus_tag="AC1PJC_001302"
     CDS             7833..9992
                     /gene="nrdE"
                     /locus_tag="AC1PJC_001302"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000523276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit alpha"
                     /protein_id="HIP6620290.1"
                     /translation="MSLKELGDVSYFRLNNEINRPVNGQIPLHKDQEAVKAFFKENVL
                     PNTKQFDSILDKIAYLLEENYLEKEFLDQYSPEFIIKIDQFLKDQNFRFKSFMAAYKF
                     YNQYALKTNDGAYYLESMEDRVLFNALYFAEGDEELALNLANEMIHLRYQPATPSFLN
                     AGRARRGELVSCFLIQVTDDMNSIGRSINSALQLSRIGGGVGISLSNLREAGAPIKGY
                     EGAASGVVPVMKLFEDSFSYSNQLGQRQGAGVVYLDVFHPDIISFLSTKKENADEKVR
                     VKTLSLGITVPDKFYELARKNEDMYLFSPYSVELEYGVPYSYLDITEKYDELVANPRI
                     RKTKIKARDLETEISKLQQESGYPYVINIDTANRSNPVDGKIIMSNLCSEILQVQTPS
                     VINDSQEYLTMGTDVSCNLGSTNIVNLMKSPDFGRSVRTMTRALTYVTDHSHISAVPS
                     IEAGNSQAHSIGLGAMGLHSYLAQNLIDYGSKTAVEFTNIYFMLLNYWTLVESNNIAR
                     ERKATFHNFDKSKYADGTYFDKYVTGDYQPQSDRVKELFEGIFIPSGQDWAELREKVK
                     ADGLYHQNRLAVAPNGSISYINDVSASIHPITQRIEERQEKKIGKIYYPAAGLATETI
                     PFYKSAYDMDMRKVIDVYAAATEHVDQGLSLTLFLRSELPKELYEWKKENKQTTRDLS
                     ILRNYAFNKGIKSIYYIRTFTDDGEEVGANQCESCVI"
     gene            10573..11532
                     /gene="nrdF"
                     /locus_tag="AC1PJC_001303"
     CDS             10573..11532
                     /gene="nrdF"
                     /locus_tag="AC1PJC_001303"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005971 - ribonucleoside-diphosphate
                     reductase complex [Evidence IEA];
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_process: GO:0009263 - deoxyribonucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit beta"
                     /protein_id="HIP6620291.1"
                     /translation="METYYKAINWNAIEDVIDKSTWEKLTEQFWLDTRIPLSNDLDDW
                     RKLTAEEKDLVGKVFGGLTLLDTLQSETGVQALRNDIRTPHEEAVYNNIQFMESVHAK
                     SYSSIFSTLNTKSEIEDIFEWTNSNEYLQCKAKIINEIYKIGTPLEKKVASVFLETFL
                     FYSGFFTPLYYLGNNKLANVAEIIKLIIRDESVHGTYIGYKFQLGFNELSGEEQDKLR
                     DWMYDLLYQLYENEEGYTRSLYDAVGWTEEVLTFLRYNANKALMNLGQDPLFPDSADD
                     VNPIIMNGISTGTSNHDFFSQVGNGYLLGEVEAMQDDDYLYGL"
     gene            complement(11567..12241)
                     /locus_tag="AC1PJC_001304"
     CDS             complement(11567..12241)
                     /locus_tag="AC1PJC_001304"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HIP6620292.1"
                     /translation="MLKFIKHVALLFLYFVAYQIASGFLMVGPTLQSIQDIPAQLIDS
                     TIWICAIIGLVLSIALIILLWKYIYPRHSVDYRVTASWFHKIQWPILLYIAFFIFQFI
                     VPVPESENQKLVIEFVSAYPLIAFSSVVIFAPILEELIFRGFLATYFFPKMVDMKAVG
                     IYLVVTGSLFSLVHMPATLPQFMIYFTMGLNLGWLYLIKRDIRYPIALHMLNNGISYL
                     MIVFLV"
     gene            complement(12251..12568)
                     /locus_tag="AC1PJC_001305"
                     /pseudo
     CDS             complement(12251..12568)
                     /locus_tag="AC1PJC_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936096.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(12578..13267)
                     /locus_tag="AC1PJC_001306"
     CDS             complement(12578..13267)
                     /locus_tag="AC1PJC_001306"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HIP6620293.1"
                     /translation="MNRLGNVKDWNVVKNWKFLLVGLAVVALNVLTQMAMFTLPNFDG
                     NNILIAAALLLLAVVLGLILTGKLGLWKGEQKWGMGANVGFVALAFIVMFGLKIIGGQ
                     LIMLEEGYGQTTANQEIINNSGLPTLVLFLFTVFFAPVLEELLFRGILMGKVFGKDSI
                     VGLLLSSFLFGFIHNPTNIGSWVVYGGMGLVLGLAYRISGKYTNALILHSLNNLLGFL
                     LMLLMQSLGLI"
     gene            complement(13293..13478)
                     /locus_tag="AC1PJC_001307"
     CDS             complement(13293..13478)
                     /locus_tag="AC1PJC_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620294.1"
                     /translation="MKFFKKIYLVLLIGLGLYAVGYIFGEWLATGQIDLSTLNILLPM
                     VLGLPALLLIEKENNEN"
     gene            complement(13498..14007)
                     /locus_tag="AC1PJC_001308"
     CDS             complement(13498..14007)
                     /locus_tag="AC1PJC_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004299049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3278 domain-containing protein"
                     /protein_id="HIP6620295.1"
                     /translation="MKKENLHIRAIRYFYDIVGELDEVSYATLTNFGNNMYMLFMTVT
                     LVSFLVSFALGEDVMGISLFLTLVYSQFKQDAIIKQLGLDKLFVAKADVKLARKKMMK
                     RTLFQTLQIAVYSLLVSIGIWQLQIPQESGTSAAEYFQFVTPMTVVFLTLVGFLSFYI
                     VNRKKIKLI"
     gene            complement(14038..14796)
                     /locus_tag="AC1PJC_001309"
     CDS             complement(14038..14796)
                     /locus_tag="AC1PJC_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3169 family protein"
                     /protein_id="HIP6620296.1"
                     /translation="MKQGKQISTKQRWMRYSAYMLISAILGGFIGFFGVLIFKFNPPS
                     YLNLDNFLIYLRIVTFVIFAGTVYLGLKANQTYKLYHSISDEDEERVDELYKKMYCNL
                     EYATISFNVAVSLTLLNLVLGFGVTFLEDSAVMYGSIFDLVFYIILLVSQVFIIKLTQ
                     KIREYKLSAFATVKEMKDFAEAMDEGEKQANYEMSFQIVFTLNQIVLPGLYLFLFVLS
                     MLLQERQITAFLVVAFLHIYINVMQVRMVRRYFK"
     gene            complement(14793..15008)
                     /locus_tag="AC1PJC_001310"
     CDS             complement(14793..15008)
                     /locus_tag="AC1PJC_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HIP6620297.1"
                     /translation="MEYVLKNRLKELRARDSLNQTELAKLAEVSRQTISLIERGEYTP
                     SVVIAMRIAQIFNENVENVFQLVEVGE"
     gene            complement(15021..15587)
                     /locus_tag="AC1PJC_001311"
     CDS             complement(15021..15587)
                     /locus_tag="AC1PJC_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3267 domain-containing protein"
                     /protein_id="HIP6620298.1"
                     /translation="MEAKKKLFEVNIMENKKFVWGLNILAVVLIFPFAFVFGMIGSLL
                     IANGSQYSELVMSEVWLLFPFYILLIVVHEAIHGIFFKVFCPENPVKYGFKWKSGMAY
                     ATSPGSLYNRMQMLVISLAPFVVISLGLTMLAGFGMMNTTLYFMLATMHAASCAGDFY
                     YAYLLLVKFAKENIAVEDTETGLIIYQA"
     gene            complement(15733..15930)
                     /locus_tag="AC1PJC_001312"
     CDS             complement(15733..15930)
                     /locus_tag="AC1PJC_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620299.1"
                     /translation="MKQPFMITGTTVARAVEIGSILLLAYILLSDLLGWSDMDTALLT
                     TLIASITCIEASLQMEKKGNK"
     gene            complement(16129..>16608)
                     /locus_tag="AC1PJC_001313"
     CDS             complement(16129..>16608)
                     /locus_tag="AC1PJC_001313"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620300.1"
                     /translation="QIWNYLLIIPLYLILRFINYEICRLLGYYALDEMGRFGYGTKEV
                     LYPRFRKIEQVYRKKYNQRSRKHQLIYYAGFVMIYSVSFPFLIIVAMFVTEAVKSMIG
                     ENSGEVIIGVFIMSILLLVTLVYGKLQSYKRNYAKWFNLEIIMWEHGHPVFREKKRE"
BASE COUNT         5159 a         3790 c         2883 g         4776 t
ORIGIN      
        1 agtactcaat gctggagcat acaaaaaaag tttgaagtag tttatctact ccaaacttta
       61 aatttcttat taatcgaaat caacatactc tttttgaagt tcaagaactt cttctgccgt
      121 tgcacattct gtcaaggcac ggtgagcata ttcttccatc ttagctgtat caagtttctt
      181 cataaggcta cgtgtacgaa gtacagatgt tgcactcata gagaactcat ccaagcccat
      241 acctacaaga agtggaacag cttgttgatc accagccatc tcaccacaca taccagccca
      301 tttaccttct gcatgtgcag ccttgataac attgttaatc aagcgaagga ttgatgggtt
      361 atatggttgg tagaggtatg aaacttgttc attcatacgg tctgcagcca ttgtgtactg
      421 gataaggtcg ttcgtaccga ttgagaagaa gtcaacttct ttggcaaatt ggtctgcaag
      481 cattgctgct gcagggattt caatcatgat accaacttgg atatcatccg caactgctac
      541 accttcagcc aacaagtttg ctttttcttc atcaaggatt gcttttgctg cacggaattc
      601 agtcaacaag gcaaccattg ggaacatgat acgaagttta ccatgtactg atgaacgaag
      661 aagggcacgc aactgagtac ggaacatttg gttaccagtc tcagagatag agatacgaag
      721 ggcacggaaa cctaggaatg ggttcatttc gtgtggaaga tcgaagtaag gaagttcctt
      781 atcaccacca atatccattg tacgaaccac aacaggcttg ccgttcatac cttcaagaac
      841 agccttgtaa gcttcgtatt gctcgtcttc tgttgggaag tcttgtgagt ccatgtacaa
      901 gaattctgta cggtaaagac caactgcttc tgcaccgtta tcatttacac cttcaacgtc
      961 ttttggtgta ccgatatttg ctgccaattc aaaatgtttg ccgtcagctg taactgtttg
     1021 agcatctttc aaaagagccc attcagcttt ttgtttagca taagcttcac cagctgcttt
     1081 aaattctgca atcacttctt cagaagggtt aatcactacg tcacctgtga taccgttaac
     1141 agccaataca tcaccgtctt taacgatttc agtaatgtta tttgtcccca aaacagcagc
     1201 aatttcaagt gtacgagcca tgatagctga gtgacttgta cgaccaccaa tgttcgttac
     1261 gaaagctttt acaaactgtt tgtttaattg cgctgtatct gaaggtgtca agtcatgtgc
     1321 gataacgatt gactcttcgt cgatagttgc tgggtttggc aagcgaacac caagcaaatg
     1381 tgccaataca cgttttgcta cgtcacgaat atctgcggca cgctcttgca tgtatgggtt
     1441 atcttccata ccttcaaaga tagcgataaa catatccgta acttctttca aaccagtctc
     1501 agcgtttgtt ttcttcgcac gaattgtttc cttaatctga ccaatcattt ctgggtcagc
     1561 aagaaccatc aagtgtgcat caaatacggc tgcggcctct tcacctaggc tagctactgc
     1621 gttctcacga ataacagaaa gctcgttttg agatgcttct agagcagcat ccaaacgagc
     1681 ttcctctgca tttgtatctt caactgtaac agtttcgaag gacaaatctg gctgaacgag
     1741 tagatatgcc ttagcaacag caacaccatc tgatgctgcg attcctttaa gcatttctgt
     1801 catattctta tgccaatcct tctttttcca ttgtttcagt gatagctgcg attgcgtcgt
     1861 cagcatcagc accttcagca gagattgtta cgtcagcgcc ttgaccaaca ccaagactca
     1921 taacacccat gatagattta aggttaacag acttttcttt gtagttcaaa gtgatgtctg
     1981 aagcaaattt actagctgtt tgcacaagca aagttgctgg acgtgcgtgg atacctgttt
     2041 ctgccacaat gtggaagtct tttgaagcca tatttggatt ctcctttatt tttacaaaat
     2101 tgcgagttat ttgtgataac ccttacaaag gacattatac cactttttga aatcattttc
     2161 aagatttttt tacctttctt tcatgtttcc gtcataaaaa gagaggttca ttttactttt
     2221 tcttcattaa atagaatcta ttagaacttc tgaaaattga ctagtagatt gatgagcaac
     2281 gtccaaaatt ttagcaaaat caagcgtaac atttttattt ataaaagcgt cttccaaggc
     2341 ctgaataatt aaaacagccg cttctttcca gccaatatat tccaacatca tacaagccga
     2401 aagcaagagg gaacatggat tagccaaatc ctttcctgca atatcaggag cagttccatg
     2461 tgtcgcttca aagatagcgt gacctgtctg ataattaatg ttagcacccg gtgagatgcc
     2521 tattcctccg acctgagccg caagagcatc tgatgcataa tctccattta gatttgtaag
     2581 agcaaccacc tggaagtttt ccggcgccaa taaaatctgc tgcagaaagt tatccgcaat
     2641 aatgtcattt actaccaaag tcccctctgc aagttctgta gcaaattctt ctttcgccaa
     2701 ttcataaccc cacttgcgga aaccgccttc tgtaaacttt tgaatatttc ccttatgaac
     2761 taaggtcacc atcttcaatt gatgttctag ggcatattct attgcagagc gaatgaggcg
     2821 tttactccct tcttccgaaa tcggtttgat accaatactt gaagattctg gaaaacggat
     2881 atttaccact cccatttcgt cttgcaaaaa ggaaatgact ttggcaactt catctgaacc
     2941 agcctcccat tcaatacctg cataaatatc ttctgtattt tcacgaaaaa tagtaatatc
     3001 cgtcttttca ggctctttca gcggacttgg cactccctta aaatagcgaa tcggacgcac
     3061 acaggcatac aaatctaatt cttgacgaag tgcaacatta agagaacgat gacctttccc
     3121 aatcggcgtc cccaagggac ctttgattgc aactaaatgc tcacgaatta tttccagtgt
     3181 ctcattcggc aaagaagttc ctgttaattc ataagccttt tctcctgcca aaacctccct
     3241 ccactgaata gaacgttgac ctgcataggc ttttttcact gcagcatcaa taactttttg
     3301 actgactgac caaatatccc tgccaatacc atctccttca atataggaaa taacgggaca
     3361 atctgggaca attaaccgtc cctctctcat caggattttt tctgccatat ttacctcttt
     3421 ccaatcggga tgtaaaccaa attcctacca cctaagtagg aagagcgcgg acgaatcaat
     3481 ttattatttt ttcgttgttc ctggacatgt gcaatccacc ccgccatacg gctcattgca
     3541 aaaatcaatg taaaaatatc actatcaata cctagtacat ggtaaactgt cgccgaataa
     3601 aaatctacgt ttggaattaa accttttttg tttttaataa agctctctac ttcctctgac
     3661 aatctataaa acgcttcatc gtctgttccg aatgtcaaat cacgcgccat ctccttcaaa
     3721 tactcttgac gaggatcaac cgttttatag actcgatggc caaatcccat aattttttcc
     3781 ttcgaatcca gcttcttctg caaatatctc tcggtatcac cactctcgcg aatagccagc
     3841 aacatgtcaa acactcgttc atttgcacca ccatgcaatg agcctttcag agtcccaatt
     3901 gccgcggtaa cacaagaata taaatccgtt aacgttgatg ccgtgacacg cgcagcaaaa
     3961 gtagacgcat tcaattcatg atcagcatga agcaccaaag ctttattaaa cgctttgatt
     4021 tgtaaatcac tcggctcctc accattcagc atataaagaa aattcgccgc aaaacccaga
     4081 tcagaccgcg gttcaattgg aaccaatcca cgtctcaacc gagcaaatgt tgcaataatc
     4141 gtcggaacct tggccataat ctgaatagat tgctcataca aagcttctaa cgaattctct
     4201 tcagcgtgta cattatatac tccaaggaga gatactgtcg aacgcaacac gctcattgga
     4261 tgcaaatgtc gccgtgattg aatcagaata cattgctcta ccgcatctga aatcgcatat
     4321 tcttttcgca ggcttttctc aaaataattt aattcaatct gagttggcaa atgcaggttc
     4381 cacagaagat agatgacttc ctcaaaagaa gcgttattct ccatcaattc agcaatgtca
     4441 taccctgcat aggacaagcg gtcattttca attgcactga ttcgcgtatc acaggcaatc
     4501 gcatctttta acccattcgt ttctgtcata cctttcctcc tagtttcttt cttactacca
     4561 taggtaaaat acctccgtgg cgataataac gaatatccgc ctctgcatca aaccgcacca
     4621 gagcttgaaa ctcctttgta acatcgtctg tttgcgcatg gactgttaca atttgaccaa
     4681 caccaacatc ttctggcaaa tcaattgtat agctttcatg tccagtcaag ccaagacttt
     4741 ctgccgactg accttctaaa aattgtaaag gaagaacacc catcatcact aagtttgaac
     4801 ggtgaatccg ctcaaatgac tcagcaagaa cagccttcac accaagtaaa cttgaacctt
     4861 tggctgccca atcacggctt gaccccatcc catagtcttt accagcaata acaatactac
     4921 cgacatcaac ttccttatat ctcatagccg catcatagat tgaaagaatc tcgtcgccaa
     4981 ctcttgtcca accaccaatt tttccagctg ccagctcatt ctttatacga atatttgcaa
     5041 aagtcccacg catcatgact tcgtgatttc cacgacgact tccataagaa ttaaaatcct
     5101 tataaacaat gccattctct tcgagataac gagctgcagg actcaatcgt gcaatattcc
     5161 ctgccgggga aatatgatct gtcgttacag aatcgccaaa tttagccaaa acagataaat
     5221 tttccagtgg ttttatggat aaatctgcct gcatattgtc aaaatagggc ggattttgaa
     5281 tataggtaga agatgaattc caattgtaat tcttatctgt ttttgtttca atcgcattcc
     5341 aagcccgact atctgtaaat acctgttggt attcttcctt atagaggtca cgagtcacat
     5401 aacgctcaat gtagtcgtct acctcctcac gacttggcat aatgtccgca aggtagacag
     5461 cttgttgctt ctcatcatac cccagcggat cccttgttaa atctacattc atatttcccg
     5521 caatagcata ggcaacaaca agtggtgggc tcgctaagaa attagcttta accaatggat
     5581 taatccgtcc ttcaaagtta cgatttccag ataataccgc agaaaccaat aaatcttctc
     5641 ccttaatcgc ctccgctact tcaggacgca gatcacctga gttaccgata caagttgtac
     5701 aaccataacc aaccaaattg aaccctaagg catctagata ggtctgcaaa cctgattttt
     5761 tcaaataacc agtcactact tttgagcctg gtgccaatga cgtcttgacc gtcttagaaa
     5821 ctgccaaacc tttttctacc gcattttttg ccagtaatcc tgccgccaaa aggacatacg
     5881 gattggaggt atttgtacac gaggtaatcg ccgcaatagc aacatgacct gtttgaattt
     5941 gctcatctcc ttcaacatac ttaaccgtgg ctgttttatc taactctgct ttctccaaac
     6001 caaatccacg cacacctact tcacgtatta aactagcctg aaactctgct tttgcatctg
     6061 ttaattctat caaatcctgt ggtcttttag gaccagaaat agatgggact actgtcgata
     6121 aatccaattc taaaaccttg ctataagacg gaaaacgttc agcatcatag aataaataat
     6181 tagccttagc ataggcttct gtcaactcca catgctcctc cgaacggttg gtcaatctca
     6241 tataatgtaa agtttctcca tcaatcggga aatagccaca agtcgcaccg tattctggag
     6301 ccatattgga aacagttgct cgatccgcta atgtaagaga agataaacct ggtccaaaga
     6361 attctacaaa cttcccaact acattttcct gacgtagaag ttgagtgacc ttaagcgcca
     6421 aatccgttgc agtggcaacc ttaggcaatt gcccagctag gcgaacacca atcacctcag
     6481 gaacgggaaa ataagatgct tcacccaaca ttgcagcttc cgcctcaata ccacctacac
     6541 cccaaccaag tacaccaata ccgttaatca tggtcgtatg actgtctgta ccaaacatag
     6601 aatctggata aagcaaacca tccttgttga taataacatc gcttagaaat tcaatgttta
     6661 cctgatggat aattccagtc gctggaggca cagcgcgata attttcaaag gaattctctg
     6721 cccatttcag aaattcatag cgttcattat ttctttcgaa ctctaaggta atatttttct
     6781 ccagagcatc ttcagtccca aaaaaatcaa cttgaacaga gtggtcgatg actaaatcca
     6841 ctggaatttc tgggttaatc aattcagggt ttccacctgc tttcaccacc gcatcacgca
     6901 tggaggctaa atctaccaca acaggaacac ctgtaaaatc ttgcaaaata acacgactag
     6961 gtttaaaagg aatttcccct ttaggagagg cagcctgata atgaagcaac tccattatgt
     7021 gattttttgt aacatccaca ccgtcttctt ttcttaaaag actctctaat aaaatacgaa
     7081 tagtataggg aagtgaatga atatccactt tttcttccat tgaaatcgaa tccaatgcat
     7141 aatatgaata ttctttccct ttatgaacca agcgttttat atgtgatttt tccatatttt
     7201 ataacctctt tcggcattat ttaatagtat agtacaaaag ctaatatata ttcaacacat
     7261 gtataactat aaatgttata ttttataaca tcgtgtattt ccttcaaaat attatgacat
     7321 ttgtaaaaaa gctgatttat actttaccga gagattgtta gggttatcaa actaaataga
     7381 aacagctatg taaacgctat ttttcgactt ggcagctttg gacggatgta caatatatgg
     7441 tgtcttataa aaatattgtg cactatattt tgtgatttta aataaacttc cttcttgact
     7501 ttaaccttaa aatcttgtat cctagattgg taacaaaatt gggatttttt attaatccct
     7561 catggacaaa ggagaaattg aatggtaacg atctattcaa aaaatgattg tgtacagtgt
     7621 aaaatgacca agaaattctt ggaccaacat agtgtagatt ataaagaaat caatctagat
     7681 gaacagccag aatttatcga tcacgtaaaa ggtctcggtt tctcagctgc acctgttatc
     7741 gaaactgaaa atgatgtttt ctcaggtttt caaccaggaa aactaaaagc cttggtttaa
     7801 ctccctaccg tttatagaaa gagattgcga ctatgagttt aaaagagcta ggcgatgtgt
     7861 cctacttccg tttaaataac gaaatcaacc gtcctgtcaa tggacaaatt cctctccaca
     7921 aggaccaaga ggctgtcaag gctttcttca aggaaaacgt ccttccaaat accaagcaat
     7981 ttgatagtat tttagacaag attgcttatc tattagaaga aaattacctt gaaaaagagt
     8041 ttttggacca atacagtcca gaatttatca tcaaaatcga tcaattcttg aaagaccaaa
     8101 atttccgctt caagtctttc atggctgcat acaagttcta caaccagtat gccctcaaaa
     8161 caaacgacgg ggcttactac ttggaaagta tggaagaccg tgttctcttc aatgccttgt
     8221 attttgctga aggcgacgaa gaattagcac taaacctggc caacgaaatg attcatcttc
     8281 gttaccagcc agcaacaccg tctttcctca acgcaggccg tgcccgtcgt ggtgagttgg
     8341 tatcgtgttt cctcattcaa gtcactgacg atatgaactc gatcggacgt tctatcaact
     8401 ctgctctgca attgtctcgt atcggtggtg gtgttggtat ttcccttagc aacttgcgtg
     8461 aggcaggtgc tccaatcaag ggctatgagg gggcggcttc tggggttgtt cctgttatga
     8521 aactcttcga agacagcttc tcctattcta accagcttgg gcaacgccaa ggggctggtg
     8581 ttgtttatct tgatgttttc cacccagata ttatttcctt cctttcgact aagaaagaaa
     8641 atgccgatga gaaagttcgc gtgaagacct tatcactcgg tattaccgtt cctgataaat
     8701 tctacgaatt ggcacgtaaa aacgaagata tgtacctctt cagcccatac tcagttgagt
     8761 tggaatacgg tgtcccttat agctaccttg acatcacaga aaaatacgac gagttggtag
     8821 caaaccctcg cattcgtaag acaaaaatca aggcacgtga cttggaaaca gaaatttcca
     8881 aactccagca agagtctggc tatccatatg ttatcaacat cgatacagct aaccgtagca
     8941 accctgttga cggcaagatt atcatgtcaa acctctgttc ggaaattctt caagttcaaa
     9001 caccaagcgt catcaatgac tctcaggaat acttgacaat ggggacagat gtatcatgta
     9061 accttggttc aaccaacatt gtcaacttga tgaaatcgcc tgactttgga cgttctgttc
     9121 gtacaatgac acgcgctttg acttatgtca cagatcattc acacatttca gctgtaccat
     9181 ctattgaagc aggaaacagt caggcgcatt caatcggtct tggagctatg gggcttcact
     9241 catacttggc tcagaacttg attgattacg gttcaaaaac tgccgtagaa tttaccaaca
     9301 tctacttcat gctcctcaac tactggactt tggtagaatc aaataacatt gcccgtgaac
     9361 gcaaggcaac cttccataat tttgacaaat caaaatacgc agacggcact tatttcgata
     9421 aatacgtgac aggtgactac caaccacaat ctgaccgcgt caaagagctc tttgaaggca
     9481 tctttattcc aagcggacaa gattgggcgg agcttcgtga aaaggtaaaa gctgatggtc
     9541 tctatcacca aaaccgtcta gctgttgctc caaatggatc tatctcttat atcaatgatg
     9601 tttctgcttc tatccacccg attacccaac ggattgaaga acgccaagag aagaaaatcg
     9661 gtaaaatcta ctatccagca gctggcttgg caacagaaac cattccattc tacaagtctg
     9721 cctacgatat ggatatgcgg aaggtcattg atgtctacgc cgctgcaaca gaacacgtcg
     9781 accaaggttt gtcactcact cttttccttc gcagcgagct cccaaaagaa ctctatgaat
     9841 ggaaaaaaga gaacaaacaa actacacgtg acctctctat ccttcgtaac tacgccttca
     9901 acaaaggtat caagtctatc tactacatcc gtacctttac cgatgacggc gaagaagtcg
     9961 gcgcaaacca atgtgaaagt tgtgtgatct aagatatgag ggcgtcaaaa ggactcagca
    10021 aaaataggaa ataccgcaga gatgtcttgc atctcaaagg gatttatctt ttttgccaag
    10081 tccttagccc gaactcgatt tcgacgtagc aagattagct attggcaagt caactagcta
    10141 atctacgcca accgctatgt gcggattggc tagctacttc actaacttcg aaactgaaga
    10201 aatatcgtct tcagtttctg cgtgtcgtaa gatgtgaggg cgtttcaaca gtctggggga
    10261 ctgttgaaag ttggaaatta gaaaatagga aataccgcag agatgtcttg catctcaaag
    10321 ggatttatct tttttgccaa gtccttagcc cgaactcgat ttcgacgtag caagattagc
    10381 tgttggcaag ccaactagct aatctacgcc aaccgctatg agcggattag ctagctacct
    10441 tacgacactg tcgttcacga tgtgaagcaa ctaataagcg atcgattaaa atccctttta
    10501 ggggattttt ttacaggcta ctatctattt gtgatataat atttgaagta taagaaaaag
    10561 aaagagaata tgatggaaac ctactacaaa gccataaact ggaacgccat tgaagatgtt
    10621 atcgacaagt ctacttggga aaagttgact gagcaattct ggctcgatac acgtattcct
    10681 ttatcaaacg acttggatga ctggcgtaaa cttactgctg aagaaaaaga cctggttggt
    10741 aaggtctttg gcggattgac cctcttggat accctccaat ctgaaacagg tgtccaagct
    10801 cttcgcaacg atattcgtac acctcacgaa gaagctgttt acaacaacat ccaattcatg
    10861 gagtctgttc acgccaaatc ttactcttct atcttctcaa ccttgaacac caagtctgag
    10921 attgaagata tctttgaatg gaccaacagc aacgaatact tgcaatgcaa ggcaaagatt
    10981 atcaacgaaa tttacaaaat tggtacccca cttgagaaga aagttgccag cgtattccta
    11041 gaaaccttcc tcttctactc tggtttcttc acgccactct actatcttgg caacaacaaa
    11101 ctggccaacg ttgcagaaat catcaaactg attatccgtg acgagtctgt tcacggtacc
    11161 tacatcggtt acaagttcca gcttggtttc aatgaattgt ccggggaaga acaagataaa
    11221 ctccgcgact ggatgtacga cctgctctac caactttatg aaaatgaaga aggctacacg
    11281 cgctcccttt atgacgcagt cggctggacc gaggaagtat tgaccttcct ccgttacaat
    11341 gccaacaagg ccctcatgaa cttggggcaa gacccgctct tccctgactc agcagacgat
    11401 gtcaacccaa tcatcatgaa cggtatttca actggtacat ctaaccacga cttcttctca
    11461 caagtcggta acggctatct actcggtgaa gtggaagcta tgcaggacga tgattatctt
    11521 tacggtttat aatcaaaaaa gcagttcaat ccgagctgct tattttttat actaaaaata
    11581 caatcatcaa ataagaaata ccgttgttga gcatatgtag cgcaatcgga taacgaatat
    11641 cacgtttgat cagatagagc catcctagat tgagtcccat cgtgaaataa atcataaatt
    11701 ggggaagagt tgctggcata tggaccagac taaataaaga ccccgttaca acaagataga
    11761 ttccaacagc cttcatatct accattttag ggaagaaata ggtcgctaaa aatccacgaa
    11821 aaatcaattc ttctaaaatt ggagcaaaga tcactactga gctaaatgca atcaagggat
    11881 aagctgatac gaattcgatc acaagctttt gattttcact ttctgggact ggtacaataa
    11941 attggaagat aaaaaatgca atatagagca atatcggcca ttgaatctta tggaaccatg
    12001 aagctgtcac acgatagtca acagaatgac gtggatagat atacttccat aacagaataa
    12061 tgagcgcaat ggagagaact agaccaatta tcgcacaaat ccaaattgta ctgtcaatca
    12121 actgggcagg tatgtcttgt atgctttgta aagttggtcc taccatcaga aaacctgaag
    12181 caatttgata ggcaacaaag tatagaaata gtaatgcgac gtgtttgata aattttaaca
    12241 taatccctcc ctaaaagctc aagtcaacaa tattatcgac tcgtaccaac ttggtttcaa
    12301 tctccccatt cgctaattca cgagaaattt taacccattc ctcatcaact gccaaaatgg
    12361 tgtattcata agcaatagaa aattcatcat caaagcggat tttagcttta cttccgatca
    12421 attctttcaa taaaatggac atctgatttt ctccttttgt agttttctac aactttttta
    12481 ccctagtttg caactgcttc acttttttcc tatctgatag agaattgaaa aatagaaatc
    12541 ctacaagaat ccataaaaat agttccattg taccctccta tatcaagccc agactttgca
    12601 tcagtagcat caacaaaaat ccgagaagat tattcagact gtgtagaata agtgcattgg
    12661 tatatttgcc agaaatacga taggcgagtc ccaggaccaa gcccatacct ccgtagacaa
    12721 cccaagatcc gatattggtc ggattgtgaa taaatccaaa cagaaaactc gatagcaata
    12781 atcccacaat cgaatcctta ccaaagactt tccccataag aatccctctg aaaagcagtt
    12841 cctccaaaac tggagcaaag aaaactgtaa agagaaacaa aactaaggtt ggcaagcctg
    12901 aattattgat gatttcctga ttggcagtcg tttgaccata tccctcttcc agcataatca
    12961 attgcccacc aattattttc aaaccaaaca taacgataaa ggcgagggct acaaaaccaa
    13021 cattcgcccc catcccccac ttctgctcac ctttccacag acctaattta ccagtcaaga
    13081 taagaccaag caccacggct aacaacaaaa gggctgcagc aatcaatatg ttattcccat
    13141 caaaatttgg tagggtaaac atagccatct gggtcaatac attaagggca acgacagcta
    13201 gtcccactaa gagaaacttc caatttttaa ccacattcca atctttgaca tttccaagtc
    13261 tattcatagc aatctcctcc atatacacta agtcagtttt cattattttc tttttcgatc
    13321 aatagcagag caggcaagcc caaaaccatc ggcaagagga tattcagggt tgacaaatca
    13381 atctgcccag tagccagcca ttctccgaaa atatagccaa ctgcgtatag accaagaccg
    13441 attaatagga caagataaat tttcttaaag aatttcatga gttgacctcc atttaaacta
    13501 aataagtttg attttcttac ggttaacaat atagaaactc aggaatccaa ccagtgtcag
    13561 aaagacaact gtcatgggag tgacaaattg gaaatactcc gctgcagatg ttccactttc
    13621 ctgtgggatt tgtaactgcc atataccaat actaaccagc agactgtaga cagcaatctg
    13681 tagagtttga aacagagttc gtttcatcat tttcttccta gccaatttca catcagcctt
    13741 tgcaacaaac aatttatcca gacccaactg tttgataatt gcgtcctgtt tgaattgaga
    13801 ataaaccaac gtcaaaaaga ggctgattcc catgacatct tctcccagcg caaagctaac
    13861 taggaagctc accagtgtca ctgtcataaa gagcatatac atattgttgc cgaaattggt
    13921 caaggtcgca taagacacct cgtctaactc accaacaata tcatagaaat aacgaattgc
    13981 tcgaatgtgt agattttcct ttttcatagc tatcacctaa aactctttca aaaattctta
    14041 tttaaaataa cgacgaacca tgcgaacctg catgacattg atgtaaatgt gaagaaaggc
    14101 aacaactaga aaggctgtaa tttgtcgctc ctgcaatagc atgctaagca caaataggaa
    14161 tagatacaaa cctggtaaca cgatttgatt caaagtgaag acgatttgga aactcatttc
    14221 gtagtttgct tgtttctcac cttcgtccat cgcctcagca aagtccttca tttcttttac
    14281 cgtagcaaaa gcagaaagct tatattcacg aattttctga gttaatttaa taataaatac
    14341 ttgagaaaca agaagtatga tatagaaaac taagtcaaaa atcgatccat acatgaccgc
    14401 actgtcttct aagaaggtaa caccaaatcc tagaaccaaa tttaacagag tcaatgatac
    14461 ggcaacatta aatgatatgg tcgcgtattc taggttacaa tacattttct tatatagttc
    14521 atcaacacgt tcttcatcct catctgaaat ggaatgataa agtttatacg tttgattggc
    14581 cttaagccca agatatacag tcccagcgaa aattacaaac gtaacgatac gtaaataaat
    14641 tagaaagtta tctaaattga gataagaagg tgggttgaat ttaaagatta atactccaaa
    14701 gaaaccgata aaaccaccca aaattgctga aatcagcata tacgctgaat atctcatcca
    14761 tctttgtttc gttgaaattt gtttcccctg tttcattctc ctacctccac taattgaaaa
    14821 acattctcca cattttcatt aaaaatttga gcaattcgca tggcaatgac caccgagggc
    14881 gtatattctc ctcgctcaat caagctaata gtctgccgtg atacttctgc taactttgcc
    14941 aactctgtct ggttgaggct atcccgtgcc ctcaactcct tgagccgatt ttttaagaca
    15001 tattccatga gttttccttt ctaggcttgg tagataatca agcctgtttc tgtgtcttca
    15061 acagctatat tttccttggc aaacttgacc aataagagat aggcatagta gaaatcgcct
    15121 gcacaagagg ccgcatgcat ggttgccagc ataaagtaaa gagtggtatt catcatccca
    15181 aatcctgcta acatggtcaa gcccaaacta atcacaacaa agggagccaa gctgattact
    15241 agcatttgca tccgattgta gagcgaacct ggactggtcg cataggccat acccgatttc
    15301 catttaaacc cgtatttgac aggattttca ggacaaaaaa ctttgaagaa gatgccgtgg
    15361 atagcctcat gcacaactat taaaagaata tagaaaggga aaagcaacca tacctccgac
    15421 atgaccagtt ccgagtattg cgaaccgtta gctatcaaca aacttcctat cattccaaat
    15481 acgaaggcaa atggaaagat gagcaccaca gcaagaatat tcaatcccca cacaaacttc
    15541 ttattttcca tgatattgac ttcaaataat ttctttttcg cttccatgtt tcctctcctt
    15601 catttgccta caagctagac taaactatat agtcctagac caactccaat cagtaagccg
    15661 aaaataattg ctcctgtaat cataatcgct gccctatctg ctgaaatgta tcgtttcatg
    15721 gtctatctcc ttctacttat ttcctttttt ctccatttgt aaacttgctt caatacaagt
    15781 aattgaagca attagagtag tcagtagagc tgtgtccata tcgctccatc ccagcaaatc
    15841 agaaaggaga atgtaagcca ataatagaat tgaccctatt tcgactgcac gcgcaacagt
    15901 tgttcctgta atcataaaag gttgtttcat ttggtgactc cttctctatt catcgtatca
    15961 gactaatcct tttgattttt atcttgatat tattgtaaca cttccttttc tttttgacaa
    16021 ctatctttat caaaaaaaca acaatttttg tcaaaaagtt tatgaagttt gtcaaaatgt
    16081 agcaaatatt agtcaggata gccaaaattc attaaaaaag aagcaagatt actctcgctt
    16141 cttttctcta aagactggat gtccatgttc ccacatgata atctctaaat taaaccactt
    16201 agcataattt cttttataac tttgtagctt gccatacacc agagtaacta aaagaagaat
    16261 gctcatgata aatactccta tgattacttc ccctgaattc tcaccaatca tcgatttgac
    16321 cgcctcagta acaaacattg cgacgataat cagaaaagga aaactaaccg aataaatcat
    16381 aacaaaaccc gcgtagtaaa ttagctggtg ctttctgctt cgctgattgt atttcttcct
    16441 atagacttgc tctatctttc taaaacgtgg atagaggact tccttggtac cgtatccaaa
    16501 gcgccccatt tcatccaagg cataatatcc taacaggcgg caaatttcat aatttatgaa
    16561 ccgtaagatg agatagagag gaataattaa tagataattc catatctg
//
LOCUS       DBNFCX010000045        16497 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.045, whole genome shotgun sequence.
ACCESSION   DBNFCX010000045 DBNFCX010000000
VERSION     DBNFCX010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 16497)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16497)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16497
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.045"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(24..818)
                     /locus_tag="AC1PJC_001314"
     CDS             complement(24..818)
                     /locus_tag="AC1PJC_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     component T family protein"
                     /protein_id="HIP6620301.1"
                     /translation="MDKLILGRYIPGDSIIHRLDPRSKLLAMFGFLLMIFWANNLVTN
                     ALLIAFVLGMVVLSRIRLSFFINGLKPMIGIILFTTFFQVFFTPGATILWEFWIFKLS
                     VEGLQQAAIIFVRFVLIIFFSTLLTLTTTPLSLADGIESGLAPLKKFKVPVHEIGLML
                     SMSLRFVPTLMDDTTRIMNAQRARGVDFNEGNLIQKVKSVIPILIPLFASSFKRADAL
                     ATAMEARGYQGGDGRTKYRILEWKFADTLAILVMLALAGLLFILKK"
     gene            complement(811..1653)
                     /locus_tag="AC1PJC_001315"
     CDS             complement(811..1653)
                     /locus_tag="AC1PJC_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002267082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter
                     ATP-binding protein"
                     /protein_id="HIP6620302.1"
                     /translation="MGIDLQEVSYTYQAGTPFEGRALFGVDLEIVDGSYTALIGHTGS
                     GKSTILQLLNGLNVPTEGRVVIDDVVITATSENKDIKQVRKKVGLVFQFPESQVFDET
                     VLKDVAFGPQNFGVSQEEAETIAREKLALVGIDESLFERSPFELSGGQMRRVAIAGIL
                     AMEPSILVLDEPTAGLDPAGRQELMDIFKKLHESGMTIVLVTHLMDDVANYADFVYIM
                     EKGKLVRSGKPVDIFQEVDFLESIQLGVPKITKFAANLERRGFVFERLPITIEEFTGM
                     VTYG"
     gene            complement(1629..2465)
                     /locus_tag="AC1PJC_001316"
     CDS             complement(1629..2465)
                     /locus_tag="AC1PJC_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter
                     ATP-binding protein"
                     /protein_id="HIP6620303.1"
                     /translation="MMNIIEVKNLKYKYNQEDERYTLNDVSFHVKQGEWLSIIGHNGS
                     GKSTTVRLIDGLLEAESGDIYIDGDALTIDNVWDKRRLIGMVFQNPDNQFVGATVEDD
                     VAFGLENQGIPLEEMRSRVDEALELVGMTDFKTREPARLSGGQKQRVAIAGVVALRPK
                     IIILDEATSMLDPEGRLDLIKIVREIKERHGMTVISITHDLDEVALSDRVIVMKNGQV
                     ESISTPNELFMREDLVDLDLDRPFTIELASSLRQTGLDLPLRYFTEEELEETLWELIS
                     KK"
     gene            complement(2462..3001)
                     /gene="pgsA"
                     /locus_tag="AC1PJC_001317"
     CDS             complement(2462..3001)
                     /gene="pgsA"
                     /locus_tag="AC1PJC_001317"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HIP6620304.1"
                     /translation="MKKENIPNALTIGRILVIPIFILLLTVWDSTISHVLAALIFALA
                     SITDYLDGYLARKWQVVTNFGKFADPMADKILVMTAFIMLVELGFAPAWVVAIIICRE
                     LAVTGLRLLLVENGGTVLAAAMPGKIKTFSQMFAVIFLLLHWNVVGQITLYIALFFTL
                     YSGYDYFKGASFLFKDTFK"
     gene            complement(3011..3868)
                     /gene="rodZ"
                     /locus_tag="AC1PJC_001318"
     CDS             complement(3011..3868)
                     /gene="rodZ"
                     /locus_tag="AC1PJC_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytoskeleton protein RodZ"
                     /protein_id="HIP6620305.1"
                     /translation="MRQKSIGEVLRTAREGRGWTFVDLQRITKIQAKYLQALEYNDFD
                     FIANSDDVQSILKAYAEALELDADVLLDAYETNSLVKYYEDGEEELRSSELKRSYKVR
                     KRKKNSYLPLIYLLLATGLIIIFVTYIVHSRLQNRVSITPTTTSYSIVEQSVSEASSG
                     TETSSTEQAQSNSTSSSSSATENVTISGSGSNIVATLKTVTYPVEVTVTAKNTTSWIS
                     LSDTLLEGGVTLTPDNPTVTTTVEEGVTSTTLVLGVVKGVEVSVGGQKLELSALTADT
                     GSITINFEQ"
     gene            complement(3950..5233)
                     /gene="yfmH"
                     /locus_tag="AC1PJC_001319"
     CDS             complement(3950..5233)
                     /gene="yfmH"
                     /locus_tag="AC1PJC_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P 5-aminopentanol modification-associated
                     protein YfmH"
                     /protein_id="HIP6620306.1"
                     /translation="MKLVEKKYPYMKESVFYGKVDNGLTVILLPKVDFHETYGILTTN
                     FGGIHTRFTLANGNSVVYPAGIAHFLEHKLFETENEEDIMNEFAKLGASANAYTSFRQ
                     TSYLFSTTQKVLESLSLLQSFVREPYFTEDNVEREQGIIEQEIEMYQDDADYRLFTGI
                     LSSLYPESPLAYDIAGTVESIAAITADDLHENFDVFYHPSNMNLFVIGNFDLEAVWKQ
                     ISSYQVAQMDNPAQSFELAGVQKLPIQEHLSEQFEVSTPKLAVGLRGNDEVDKETIQK
                     YRLSLQFLFAMLFGWTSKRYQQLYEQGKIDSSFQFQLEVTPEYHYLIISGDTQEPITL
                     SSILMKALRKFEDDADVTEDHLQLLKNEMYGDFIRSLNSLEFTASHFVSQYSEYENVF
                     DIPQMIQSLQLDDIREAGRRFIDHCDMTDFTIFPK"
     gene            complement(5230..6483)
                     /gene="yfmF"
                     /locus_tag="AC1PJC_001320"
     CDS             complement(5230..6483)
                     /gene="yfmF"
                     /locus_tag="AC1PJC_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P 5-aminopentanol modification-associated
                     protein YfmF"
                     /protein_id="HIP6620307.1"
                     /translation="MKLQEGVDLHFIDTDQFTTNRIRIRFAAEMSEATVAGRVLVANI
                     FEMGNQEFQTAQAVRRRLAELYGAQFSTSVSKRGKVHCVDVTISYVSPRHLPENEDIT
                     VEILDFLYTCIFRPLKKGRGFDSQIFEVEKTNLINFLQSEIEDNFYHADVEMSKLFYK
                     DPSLQIPRVGRLDLVEKETAESTFQIYRNMLRMDKIDIFVLGKVDREQVKRKLEDFGF
                     TYRNPKLELEYHQEYSNITQEKIERKQARQSILELAYHLQVVYNDVNYPALMVFNGLL
                     GAFSHSKLFMNVREKESLAYTIGSQVSIFSGMLKVYAGISRENRLRVMKLISKQLLDL
                     KCGKFTEEELELTKNMLIHSATLAQDRQNNLIEQVYNQVTLGNRNLSWLDWIEAIKSV
                     SIEDVIRVGQMINLQAVYFMEGTEE"
     gene            6557..6940
                     /gene="yaaA"
                     /locus_tag="AC1PJC_001321"
     CDS             6557..6940
                     /gene="yaaA"
                     /locus_tag="AC1PJC_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein YaaA"
                     /protein_id="HIP6620308.1"
                     /translation="MEFKLFDDYITLQALLKTTGILHSGGAIKGFLEENTILFNGEDE
                     KRRGKKIRVGDVITLPDHNTSITIVAPSAEEIKQHQEDQAEKERVAAIVKKLNQENKK
                     NKKQVKTPKKATKNTERKPVRFPGM"
     gene            6943..8037
                     /gene="recF"
                     /locus_tag="AC1PJC_001322"
     CDS             6943..8037
                     /gene="recF"
                     /locus_tag="AC1PJC_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638862.1"
                     /note="All proteins in this family for which functions are
                     known are DNA-binding proteins that assist the
                     filamentation of RecA onto DNA for the initiation of
                     recombination or recombinational repair; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HIP6620309.1"
                     /translation="MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIY
                     VLALTRSHRTRTDKDLLQFQEKELSVSGLLHRTSGKVPLDIHLTDKGRVTKVNHLKQA
                     KLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQR
                     NTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLKKLEEFGNRKVQEISGNQEEL
                     TIEYQTSIKLTDDVNLIDKFLTELERCRKRDLFKKNTGVGPHRDDVAFFINGMNAHYG
                     SQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQIKLLETITDTIQTF
                     ITTTSLDHLHKLPDSLKIFHIESGKVTESE"
     gene            complement(8109..9590)
                     /gene="guaB"
                     /locus_tag="AC1PJC_001323"
     CDS             complement(8109..9590)
                     /gene="guaB"
                     /locus_tag="AC1PJC_001323"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003090086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HIP6620310.1"
                     /translation="MSNWDTKFLKKGFTFDDVLLIPAESHVLPHDIDLKTQLAPNLTL
                     NLPIISAAMDTVTDSKMAIAMARAGGLGVIHKNMSIAEQADEVRKVKRSENGVIIDPF
                     FLTPEHTIAEAEKLMATYRISGVPIVETLENRKLVGIITNRDMRFISDYSQPISTNMT
                     SDELVTAPVGTDLATAEAILHKHRIEKLPLVDENGRLSGLITIKDIEKVIEFPNAAKD
                     EFGRLLVAGAVGVTSDTFERAEALFEAGADAIVIDTAHGHSAGVLRKIKEIRDHFPTR
                     TLIAGNIATAEGARALYEAGVDVVKVGIGPGSICTTRVIAGVGVPQVTAIYDAAGVAR
                     EYGKTIIADGGIKYSGDIVKALAAGGHAVMLGSMFAGTDEAPGETEIFQGRKFKTYRG
                     MGSIAAMKQGSKDRYFQASVNEANKLVPEGIEGRVAYKGSVADMIFQMVGGLRSGMGY
                     VGAGNLTELHENAQFIEMSGAGLKESHPHDVQITNEAPNYSVQ"
     gene            complement(9822..10847)
                     /gene="trpS"
                     /locus_tag="AC1PJC_001324"
     CDS             complement(9822..10847)
                     /gene="trpS"
                     /locus_tag="AC1PJC_001324"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HIP6620311.1"
                     /translation="MSKPIILTGDRPTGKLHIGHYVGSLKNRVLLQDAGQHELFVFLA
                     DQQALTDHAKEPQKIVESVGNVALDYLAAGLDPAKTTIFIQSQIPELAELTMYYMNLV
                     SVARLERNPTVKTEIAQKGFGEGIPAGFLVYPVSQAADITAFKANFVPVGNDQKPMIE
                     QTREIVRSFNHAYQTDILVEPEGIYPENEAAGRLPGLDGNAKMSKSLGNGIYLADDMD
                     TLKKKVMSMYTDPNHIRVEDPGKIEGNMVFHYLDVFGREEDKAEIEAMKEHYQRGGLG
                     DVKTKRYLLDILERELGPIRERRLEFAQDMGQVYAMLEAGSQKARQVAATTLDQVKSA
                     MGINYFK"
     misc_binding    complement(10894..11100)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:15.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            11202..12074
                     /locus_tag="AC1PJC_001325"
     CDS             11202..12074
                     /locus_tag="AC1PJC_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HIP6620312.1"
                     /translation="MKERIKDFISVTLGSVVMAIGFNSFFLENNIVSGGVGGLAIALN
                     ALLGWSPSDFVLYCNIPLLIICWFFLGKSVFIKTVYGAVIYPLCIKLTAGLPNLTENP
                     LLAAIFGGIILGFGLGLVFLGNSSTGGTGILIQFIHKYTPLSLGLTMAIIDGIIVGLG
                     FVAFDTDTVMYSIIALMTITYIVNRMMSGTQSSRNVMIISQKSEEIKDYITKVADRGV
                     TEFPIIGGFTGVDKRMLMTTISIPEMQKLETAVLEIDETAFMVVMPASQVRGRGFSLQ
                     KDHKHYDEDILIPM"
     gene            12139..13761
                     /locus_tag="AC1PJC_001326"
     CDS             12139..13761
                     /locus_tag="AC1PJC_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HIP6620313.1"
                     /translation="MLTVSDVSLRFSDRKLFDDVNIKFTAGNTYGLIGANGAGKSTFL
                     KILASDIEPSTGHISLGPDERLSVLRQNHFDYEDERVIDVVIMGNEQLYSIMKEKDAI
                     YMKEDFSDEDGVRAAELEGEFAELGGWEAESEASQLLQNLNISEDLHYQNMSELTNGE
                     KVKVLLAKALFGKPDVLLLDEPTNGLDIQSINWLEDFLIDFENTVIVVSHDRHFLNKV
                     CTHMADLDFGKIKIFVGNYDFWKQSSELAAKLQADRNAKAEEKIKELQEFVARFSANA
                     SKSKQATSRKKMLDKIELEEIIPSSRKYPFINFKSEREIGNDLLTVENLKVVIDGETI
                     LDNISFILRPGDKTALIGQNDIQTTALIRALMGDIEYEGTVKWGVTTSQSYLPKDNTR
                     DFDTNESILDWLRQFASKEEDDNTFLRGFLGRMLFSGDEVNKPVNVLSGGEKVRVMLS
                     KLMLLKSNVLVLDDPTNHLDLESISSLNDGLKAFKESIIFASHDHEFIQTLANHIIVI
                     SKNGVIDRIDETYDEFLENAEVQAKVQELWKA"
     gene            13798..16377
                     /locus_tag="AC1PJC_001327"
     CDS             13798..16377
                     /locus_tag="AC1PJC_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhO family protein"
                     /protein_id="HIP6620314.1"
                     /translation="MKKIFTKTSIYYLFSFLIPLTIISIVLAFQGIWWGSDTTILASD
                     GFHQYVIFNQTLRNTLHGEGSLFYTFSSGLGLNFYALSSYYLGSFLSPIVFFFDLQSM
                     PDAIYLVTIVKFGLTGLSTYVSLKGIHKNLKEEWALLLATSFSLMSFSTSQLEINNWL
                     DVFILLPLVLLGLHRLLKKQGPILYYITLTCLFIQNYYFGYMVAIFLTLWTLVQLSWI
                     DSQRIKRFINFTIVSILSALSSMFMLLPTYLDLKTHGETFTKIVNLKTEDSWYLDFFA
                     KNLVGSFDTTKFGSIPMISVGLVPLILALLFFTLKEIKPTVKLSYALFFTFIISSFYL
                     QPLNLFWQGMHAPNMFLYRYAWALSITVIYLAAETLVRLRQVSIKNFTLIVSFLLICF
                     ASTFIFRDHYEFLMDVNFLLTLEFLIAYFILFVAMIHYKSSLKWINIVLLFFTFLELG
                     LHSHYQVQGISDEWHFPSRSNYEEKLTDIDSIVKSTKTTTDSFYRIERLLPQTGNDSM
                     KFNYNGISQFSSIRNRASSSVLDKLGFRSDGTNLNLRYQNNTIIADSLFGIKYNLATT
                     DPNKFGFTLNQSQSTINLYENSFNLGLALLTEGIYKDVNFTNLTLDNQTNFLNQLTGL
                     SQKYYHTLSDVVSQNTVELSNRMTVNKVDNEDAAKATFLVNIPANSQVYLNLPNLTFS
                     NENQKKVVITVNNQSSEFTLDNAFSFFNVGSFTTDVQVQVDVYFPENNQISFDKPQFY
                     RLDLLAFQQAISILQEKQVVTKTDGNKVTVDFVTDKEASLLLTLPYDKGWNATIDGKP
                     IKIQKAQEGFMKVDVSPGQTKLVLTFVPNGFYLGLLISLGAVFVFFSYQFIGYYYSKN
                     RES"
BASE COUNT         5182 a         3535 c         2731 g         5049 t
ORIGIN      
        1 acgctatttc tagcgttttt tactcatttt ttcaatataa ataagagtcc agctaaagct
       61 aacataacta aaattgctaa cgtatctgcg aacttccatt ccaaaatccg gtacttggtt
      121 ctcccatctc cgccttgata cccacgcgcc tccatcgccg ttgcaagagc atctgccctc
      181 ttaaaacttg atgcgaataa cggaatcaaa ataggaataa ctgactttac cttctgaata
      241 agatttcctt cattaaagtc cactccacga gctctctgag cattcataat ccgagtggta
      301 tcatccatca aggtcggtac aaaacgcaag ctcatggaca acatcaaacc aatttcatgc
      361 acaggaactt taaatttctt caaaggtgca agccctgact caataccatc agccaagcta
      421 aggggtgttg tcgtcaaggt caacaaggtc gagaagaaaa taatcaaaac aaagcgaaca
      481 aaaataatcg ccgcctgttg caacccttct acagataatt taaaaatcca aaactcccat
      541 agaatggtcg ctccaggtgt aaagaaaacc tgaaagaaag ttgtaaatag aataattcct
      601 atcatcggtt tcaaaccatt aataaaaaat gataagcgaa tacgagataa aacaaccatt
      661 cctaaaacaa atgctatcaa caaggcattg gtgaccaaat tattggccca aaaaatcatc
      721 aatagaaatc caaacattgc taaaagctta cttcttggat ccaagcgatg aataattgaa
      781 tccccaggaa tatagcgacc taaaattaat ttatccatat gtcaccatcc ccgtaaattc
      841 ttcaattgta ataggaagac gttcaaatac aaaacctctt ctctccaaat tagctgcaaa
      901 cttagtaatc ttaggcactc ccaactgaat actctctaaa aaatctacct cttgaaaaat
      961 atcgactggt ttaccagaac ggaccagctt tcccttttcc ataatgtaaa caaaatcagc
     1021 atagttagcg acatcatcca tcaaatgagt taccaaaacg attgtcatgc ctgattcatg
     1081 aagctttttg aaaatatcca tcaattcctg acgacccgca ggatccaatc cagccgttgg
     1141 ttcatccaaa actaagatac ttggttccat tgccagaatc ccagcaatag ctacccgacg
     1201 catttgacca ccagatagtt caaaaggact acgctcaaac aagctttcat caattccaac
     1261 caaggccaac ttttcacgcg caatcgtttc agcctcttcc tgagaaactc cgaaattttg
     1321 tggaccaaaa gcaacgtctt ttaagaccgt ttcatcaaac acttgacttt caggaaattg
     1381 gaacaccagc cccactttct tcctgacttg cttaatatcc ttattttcag acgtcgctgt
     1441 aatcacaaca tcatcaatga ctactcttcc ttctgttggt acatttaatc cattcaagag
     1501 ttgtaaaatc gttgatttac ccgaacccgt atgcccaata agggccgtgt aagagccatc
     1561 aacaatctcc aaatccacac caaaaagcgc acgcccctca aaaggagtgc cagcttgata
     1621 ggtatagctt acttcttgga gatcaattcc cataaagttt cctctaattc ttcctctgta
     1681 aaatagcgga gcggtaaatc aagtccagtc tggcgcaaag atgaagccag ttctatcgta
     1741 aacggtctat ccaagtctaa atctaccaaa tcttctcgca taaatagttc atttggagtg
     1801 ctaattgatt caacctgtcc atttttcatc acgataactc ggtcactcaa tgcaacctca
     1861 tccaaatcat gtgttataga gataaccgtc ataccatgac gctccttaat ttcacggaca
     1921 atcttaatca agtcgagacg accttctgga tccaacatag acgtagcctc atccaaaata
     1981 ataatttttg gacgcaaggc aaccactcca gcaatcgcca ccctctgctt ctgaccacca
     2041 gataaacgag caggctcacg tgttttgaaa tcagtcattc caactaattc caaagcttcg
     2101 tcaactcgac tacgcatctc ctccaaaggg attccctgat tctctaaacc aaatgcaaca
     2161 tcatcttcaa ctgtagcgcc tacaaattgg ttatctggat tttgaaaaac cataccaatc
     2221 aagcgtcgct tatcccatac attatcaatg gttaaggcat caccgtcaat ataaatatca
     2281 cctgattcag cttccaacaa accatcaatt aatcgaacag ttgttgattt acccgaacca
     2341 ttatgaccaa taatagacag ccactctccc tgtttcacgt gaaacgagac atcatttaag
     2401 gtatagcgct catcctcttg gttgtattta tattttaaat tttttacttc aataatattc
     2461 atcatttaaa tgtatcttta aacaagaagg acgcaccctt gaaataatca taacctgaat
     2521 atagggtaaa gaaaagtgca atatagagtg ttatttgccc cacgacgttc cagtgtaaga
     2581 gcaggaaaat aactgcaaac atctgtgaaa atgttttgat ttttcctggc atagccgcag
     2641 ctagaactgt tcctccattt tccaccaaga gtagacgaag acctgtcact gccaattcac
     2701 gacaaataat gattgcaact acccaagctg gagcaaagcc aagctctaca agcatgataa
     2761 atgctgtcat caccaaaatc ttatctgcca tcggatccgc aaattttcca aagtttgtta
     2821 caacctgcca tttacgagcc aagtagccgt ctagataatc cgtaatacta gctaatgcaa
     2881 aaataagtgc tgctaagaca tgactaattg ttgaatccca aacggtcagt aacaagataa
     2941 aaattggaat taccaagatc ctacctatcg tcaatgcatt gggaatattt tcttttttca
     3001 tataaaacct ttattgttca aaatttattg taattgagcc tgtatctgct gtcaaggctg
     3061 atagttctag cttttgacca cctacactta cctcaacccc tttaacaaca ccaagaacaa
     3121 gtgtagtaga agtcactcct tcttcaacag tagtagttac tgttggatta tcaggtgtta
     3181 gtgtaacgcc cccctctaac aaggtgtcag aaaggctgat ccaactcgtt gtattttttg
     3241 ctgttacagt tacttctact ggataagtca ctgttttaag ggtcgcaaca atgttagaac
     3301 ctgatcctga aatagtcaca ttttctgtag cggaactact tgaactcgtt gaatttgact
     3361 gcgcctgctc agtagaactc gtctctgtgc cactacttgc ttcagataca gattgctcaa
     3421 ctatactata tgacgttgta gtaggcgtaa tcgatactct attttggagt ctgctatgaa
     3481 caatataagt cacaaaaata ataatcaaac ccgtcgcaag taataagtaa atcaacggaa
     3541 gataagagtt ctttttacgt ttacgaacct tatagcttct tttcaattct gaagagcgta
     3601 gttcttcttc tccatcttca taatatttca ctaaactatt ggtctcgtaa gcatccagta
     3661 gaacatctgc atctaattcc aaagcctcag catatgcttt taaaatagac tgaacatcat
     3721 ctgagtttgc aataaaatca aaatcattgt actcaagtgc ctgcaaatat ttagcttgga
     3781 tttttgttat ccgttgcaag tcaacaaatg tccaaccccg tccttctctg gctgttctaa
     3841 gtacttcccc tatactcttt tgtctcataa tatcctctct ctatcgctca tcatgtacag
     3901 tatactattc taacaaaatt ccaaagaaat ttcgacgggt tgcgcccact tattttggaa
     3961 aaatcgtgaa atctgtcata tcacagtgat caataaagcg acgacctgcc tctctgatgt
     4021 catctaactg aagactttgt atcatttgag gtatatcaaa aacattttca tattctgaat
     4081 actgagaaac aaagtgacta gctgtaaact caagagaatt taagctacga ataaaatctc
     4141 catacatctc gtttttcaac aattgtaaat gatcctctgt cacatctgca tcatcctcaa
     4201 atttcctaag tgctttcatc agtatactag aaagcgtaat gggttcttga gtatcgcccg
     4261 agataatcaa atagtggtat tcaggtgtaa cctctaattg gaactggaaa gaagaatcaa
     4321 tttttccctg ctcgtataac tgttgatatc gttttgaagt ccaaccaaac aacatggcaa
     4381 ataaaaattg taaactaagc cgatatttct gaatagtctc cttatcaacc tcgtcatttc
     4441 cccgtaaacc aacagccaat tttggggtag atacttcaaa ttgttctgag agatgttcct
     4501 gtatcggcaa cttttggaca cctgccaatt caaacgactg agctggatta tccatctgag
     4561 ccacttgata acttgaaatt tgtttccaaa ctgcctctaa atcaaaatta ccaataacga
     4621 ataaattcat gttacttgga tgataaaaca catcaaaatt ctcatgtaaa tcatccgcag
     4681 taattgcagc aattgattca actgtccctg ctatatcata ggccaaagga ctttctggat
     4741 aaagtgatga tagaattccc gtaaacaagc gataatctgc atcatcttga tacatctcaa
     4801 tttcttgttc aataatcccc tgttctcttt ctacattgtc ttctgtaaaa tacggttctc
     4861 gaacaaaaga ttgtaaaagt gatagagact ccaatacttt ctgagtcgtt gaaaataagt
     4921 aactagtctg tctaaaactg gtataagcat ttgcgcttgc tcccaattta gcaaactcat
     4981 tcataatatc ctcttcattc tcagtttcaa acagcttatg ttctaaaaaa tgtgcaatcc
     5041 ccgcaggata aacaacacta ttaccattag ccaatgtaaa tcgagtatga atacccccaa
     5101 aatttgtcgt tagaattcca tatgtctcat ggaaatctac tttaggaagc aaaataactg
     5161 tcaacccatt gtcaactttc ccataaaaga cagattcttt catgtaagga tacttcttct
     5221 caactaactt cattcttctg tcccctccat aaagtaaaca gcctgtaaat taatcatctg
     5281 tcctactcga atgacatcct ctattgatac cgatttgata gcctcaatcc aatctaacca
     5341 acttaaattt ctatttccta aggtaacttg attatatact tgttctatca aattattctg
     5401 cctatcttga gccaaggttg ctgaatgaat caacatgttt tttgtcaact ctaattcttc
     5461 ttctgtaaac ttaccacatt ttaaatcaag tagttgttta ctaattaact tcattaccct
     5521 gagtctattt tcacggctaa ttccagcata gaccttcagc attcctgaaa aaatagaaac
     5581 ctgactgcca attgtatagg ccaaactttc tttctcacga acattcataa ataacttcga
     5641 atgggagaaa gcacccagta ggccattaaa taccatcaaa gccggatagt ttacatcgtt
     5701 gtaaaccact tgtaaatgat atgccaattc caaaatggac tgccttgcct gtttacgctc
     5761 gattttttct tgcgtgatgt ttgagtattc ctggtgatat tctagctcta attttggatt
     5821 tctataagta aaaccaaaat cttcaagttt tcttttgact tgttctctgt caaccttccc
     5881 taagacaaat atatcaattt tatccatacg caacatattc cgataaatct gaaaggttga
     5941 ttctgctgtt tctttttcaa ccaaatcaag cctaccgacg cgtggaattt gaagagaggg
     6001 atctttataa aaaagcttac tcatttcaac atctgcatga taaaaattat cttctatctc
     6061 tgactgaaga aaattgatta aattcgtttt ttcaacctcg aaaatctggc tatcaaatcc
     6121 tcgccccttt ttcagtggtc taaatataca tgtgtataaa aaatcaagaa tctccactgt
     6181 aatatcctca ttttctggta agtgacgagg actgacatat gaaattgtca catctacaca
     6241 gtgcacctta ccacgtttcg aaactgaggt cgagaactga gcaccataca attctgccaa
     6301 tcttctccga acagcctgag cagtctgaaa ttcttggtta cccatttcaa aaatatttgc
     6361 aactaacaca cgaccagcaa ctgtagcctc actcatttca gctgcaaagc gaatacgtat
     6421 acggtttgtc gtaaactgat ctgtatcaat aaaatgaaga tctactccct cttgtaattt
     6481 catcgtcttc ctctttcaaa cattgtacct tccattatac cattttgtga tataatattc
     6541 tgtaacgagg tgacttatgg aatttaaatt atttgatgac tacatcacat tacaagcatt
     6601 gttaaaaacg actggtattc tccattcagg aggtgccatt aaaggtttct tagaagaaaa
     6661 taccattctt ttcaatggag aggatgaaaa aagacgcggc aaaaaaatcc gtgtcggaga
     6721 tgttatcaca ctcccagacc acaacaccag catcacaatc gtcgctccta gtgcagagga
     6781 aatcaaacag caccaagagg atcaagctga aaaagaacgt gtggctgcaa tcgttaaaaa
     6841 gttaaatcaa gaaaataaaa agaataagaa acaggtaaaa actcctaaaa aagcaactaa
     6901 aaatactgaa agaaaacctg ttcgtttccc tggtatgtag acatgtggct agaacgatta
     6961 gagttacaac attttcgcaa ttacaaccaa ttagatattg agttccacaa agggctcaat
     7021 gtctttttag gcgaaaacgc ccaaggaaaa accaatattc tagaatctat ctatgtttta
     7081 gccttaacac gaagtcatcg aacacggaca gataaggacc tattacagtt tcaagaaaag
     7141 gaattatctg tttctggttt actccatcgc acaagcggta aagttccact tgacattcac
     7201 ttgacagaca aggggcgagt gaccaaggtc aaccatctca aacaagcaaa actctctaat
     7261 tacattggac atatgaacgt cgtcctattt gctccagaag atttacagct gataaaaggt
     7321 gcgcctgctt tgagaagaaa attcatcgat gtcgagctag ggcaaatcaa accactctat
     7381 ctctctgacc tatcgaatta taaccacgtt ctaaaacaaa gaaatactta cctcaaatct
     7441 acagataaga ttgatgagaa cttcctatcc gtgttagatc agcaacttgc tgaatatggt
     7501 agtcgtgtta tccaacatcg tattgacttt ctaaagaaat tagaggaatt cggaaataga
     7561 aaagttcaag aaatatctgg caatcaggaa gaattgacaa tcgaatacca aacctcaatc
     7621 aaattgacag atgatgtcaa cttaattgac aaattcttga cggaattgga aaggtgtcgc
     7681 aaacgtgatt tatttaagaa aaatacggga gttggaccac atcgagatga tgtagccttc
     7741 tttataaatg gaatgaatgc ccattatggt agccaaggtc agcaccgcag tctcgttctg
     7801 tcactcaaac tagctgaaat tgagctgatg aaagaagtca cacgagagta cccaattcta
     7861 ctcttagatg atgttatgag tgagctggat aataatcgtc aaatcaaact actagaaact
     7921 attacagata cgattcaaac atttattaca acgacatctt tagaccattt acataagcta
     7981 cctgatagtt taaaaatctt ccatattgag tctggtaagg ttactgaatc agaataagat
     8041 tgtttacact gttgtcaata aaatttacaa aaaagtaaag accctgtcaa gagggtcttg
     8101 tttttgtttt actgaactga atagtttgga gcttcgtttg tgatttgaac atcgtgtgga
     8161 tggctttctt tcaaaccagc acctgacatt tcgatgaatt gagcattttc atgcaattca
     8221 gtcaagttac cagcacctac atagcccata cctgagcgaa gtccaccaac catttggaat
     8281 atcatatctg caacagaacc tttataggct acacgtcctt caattccttc tggaacaagt
     8341 ttgttagctt cattgacaga tgcttggaag taacggtctt ttgaaccttg tttcatggca
     8401 gcgatagagc ccataccgcg ataggtcttg aacttacgac cttggaagat ttctgtctca
     8461 cctggtgctt catccgttcc tgcaaacata gaaccaagca taacggcatg accaccagcg
     8521 gcaagtgcct tgacaatatc tccagaatat ttgataccac catcagcgat aatcgtttta
     8581 ccatattcac gcgcaacacc agcggcatca tagatagctg tcacttgtgg cacaccgaca
     8641 cctgcgatga cacgtgttgt acagattgaa cctggtccaa taccgacctt gacaacatca
     8701 acaccagctt cataaagagc acgagctcct tcagctgtgg caatgttgcc ggcaatcaag
     8761 gtacgagttg ggaagtggtc acggatttct ttgatcttac gaagaacacc tgctgagtga
     8821 ccgtgagccg tatcgatgac aatcgcgtct gcacctgctt caaaaagggc ttctgcacgt
     8881 tcaaaagtat cagatgtaac accaacagca cccgcaacca agagacgacc aaattcatcc
     8941 ttcgcagcat ttgggaactc aatcactttc tcaatatctt tgatggtaat caagcctgac
     9001 aaacgaccat tttcatcaac caatggcaat ttttcaatac gatgcttgtg aagaatagcc
     9061 tctgcagtcg caagatctgt tccaactggc gctgtcacca attcatcact tgtcatgttt
     9121 gtcgaaattg gctgtgagta atctgaaatg aaacgcatat cacggttggt gataataccg
     9181 accaacttac gattttctaa tgtttcaacg attggcacac cggaaatacg ataagttgcc
     9241 atcaatttct cagcttcagc aatggtgtgt tctggtgtta agaagaatgg atcgataatg
     9301 acaccatttt cagaacgttt taccttgcgc acctcatcag cctgctctgc gatagacata
     9361 ttcttatgga tgacgcccaa accacctgca cgcgccatag cgatagccat tttgctatct
     9421 gttactgtat ccatggcagc agaaataata ggaagattaa gggtcaaatt tggtgctaat
     9481 tgtgttttta aatcaatatc atgtggtaat acatgacttt cagccggaat aagtaataca
     9541 tcgtcgaaag taaagccttt tttcaaaaat ttagtgtccc agtttgacat tttcttcctc
     9601 ttttcttatt taatatgtag catgattgct atttgtattt taattatgat aacattttga
     9661 aatcatttgt caatcattat tcgctttaat atcatcattc ctaaaaattc agaaaattct
     9721 attcagtttt atatataaaa ttcgaacgtt tgttttttgc tacgtcgtaa aataaatgaa
     9781 aaaagcaaca ttttctcaac attgctcttt cattgttaac cttatttaaa atagttaatt
     9841 cccatagcag atttcacttg gtcaagagtt gtcgcagcaa cttggcgagc tttttggcta
     9901 cctgcttcca acattgcata gacctgtccc atatcctgtg caaactccag acggcgttca
     9961 cggattggtc ctaattctct ctctaaaatg tccagcaaat aacgtttggt cttcacatcg
    10021 cccaaaccac cacgttgata gtgctccttc atagcctcaa tctcagcctt atcttcttcg
    10081 cgcccaaaaa cgtcaagata gtggaaaacc atgtttcctt caatcttacc tgggtcttca
    10141 acacggatgt ggttgggatc agtgtacatg gacatgactt tcttcttgag cgtatccatg
    10201 tcatctgcca agtaaatacc atttccaagt gacttagaca tcttagcatt gccgtccaaa
    10261 cctggcaagc gaccagctgc ctcattttca ggataaatgc cctccggctc taccaaaata
    10321 tcagtctgat aagcatgatt aaagctacga acgatttcac gagtctgctc aatcatcggt
    10381 ttctggtcat ttccaacagg gacaaaattt gccttgaagg ctgtaatatc cgccgcttga
    10441 gacacaggat agaccaagaa accagctgga attccttcgc caaatccttt ctgagcaatc
    10501 tcggttttta cagttggatt gcgttctaga cgtgcaacag ataccaagtt catgtagtac
    10561 atggtcaact ctgccaattc aggaatttga ctttgaatga aaattgttgt cttagctggg
    10621 tcaagtcctg ctgcaagata gtccaatgcc acattaccaa ctgattcaac aatcttttgc
    10681 ggttctttgg catggtctgt caacgcttgt tggtctgcta aaaagacaaa aagttcatgt
    10741 tgacctgcat cctgtaataa aacacgattt ttcaacgaac caacataatg tccaatatgt
    10801 aatttgcctg ttggacggtc tcctgttagg ataatcggtt tactcataaa atattctcct
    10861 tttacataat aaaagcccac gcacagaaaa ctgtgcgagg gcgtcaagga cacggtgcca
    10921 cctcacttat aagcattaaa taagcttaca tctttttgca cataaggcct gctagccgaa
    10981 tccttattta ttcagattct attcactcag tccattcata agcgactctt gtttgtttcc
    11041 accaaccaca aactctctaa aaattatcca cttactactc ttctgattga ttcctattat
    11101 aaccgcaaaa aattagaaag tcaagctgac aaagccttga cgatactgtc taaattaggg
    11161 ataatagaaa ttgcttttat aacactaacc aaggagaata tatgaaagaa cgtataaagg
    11221 actttatctc tgtcacactc ggatcagttg tcatggccat tggatttaac agtttttttc
    11281 tagagaataa tatcgtatct ggtggtgtcg gaggtttagc aatcgcactc aatgctcttc
    11341 tggggtggag tccgtctgac tttgtcctct actgtaacat ccctttatta attatctgtt
    11401 ggtttttctt aggaaaatct gtatttatca aaactgtcta tggtgctgtc atttatcctc
    11461 tttgcatcaa gttgacagca ggtttaccca acttgacaga aaatcctctc ctagctgcta
    11521 ttttcggtgg aattatccta ggttttggac ttggtcttgt tttccttgga aattcttcta
    11581 ctggtgggac aggtattctt attcaattta ttcacaagta caccccttta tcattaggtc
    11641 tgacaatggc tattattgat ggtattatcg ttggtcttgg atttgttgcc ttcgatactg
    11701 acactgttat gtactcgatt attgccctaa tgaccattac ttatattgtc aaccgcatga
    11761 tgtctggtac ccaatcttct cgaaatgtca tgattatttc tcaaaaatca gaagaaatta
    11821 aagactatat tactaaagtt gctgatcgcg gtgttacaga atttccaatt atcggtggct
    11881 ttacaggggt tgacaagcgc atgttgatga ctaccatctc tattccagaa atgcagaaac
    11941 tggagacagc ggtattagaa attgatgaaa ctgcctttat ggttgttatg cctgcgagtc
    12001 aggtgcgtgg acgtggcttc agtcttcaaa aagaccataa acattatgat gaagatattt
    12061 tgattccaat gtaattcatt gaaaattcaa gttctttcta gtacaataaa actaatagac
    12121 agaaatagag gagaaactat gcttacagta tcagacgtgt cgcttcgctt tagcgaccgc
    12181 aaattatttg acgatgtcaa tatcaaattt acagcaggaa atacctacgg tttgattggt
    12241 gcaaacgggg ctggtaaatc tacattttta aaaattcttg ctagtgacat cgagccatca
    12301 acaggtcata tttcacttgg accagacgag cgcctttctg tactacgtca gaaccatttc
    12361 gactatgaag atgagcgcgt gattgacgtt gttatcatgg ggaacgagca actttacagc
    12421 ataatgaaag agaaagatgc catttacatg aaggaagatt tttctgatga agatggtgtt
    12481 cgtgctgctg aattagaagg tgagtttgct gaacttggtg gttgggaagc tgaaagtgaa
    12541 gcttctcaat tgctccaaaa cctcaatatt tcagaagacc tccactacca aaacatgagt
    12601 gaattgacca acggtgaaaa agttaaggtc ctcttggcta aggccctctt tggtaaacct
    12661 gatgttcttc ttttggacga gccaaccaac ggtctggaca tccaatccat caactggctc
    12721 gaagatttct tgattgactt tgaaaatacg gttatcgtcg tgtcccacga ccgccacttc
    12781 ttaaacaaag tatgtaccca tatggccgac cttgacttcg gtaaaatcaa gattttcgtc
    12841 ggtaactacg acttctggaa acaatctagt gaattagcag ctaaactaca agctgaccgt
    12901 aatgccaaag cagaagaaaa aatcaaggaa ctacaagaat tcgttgcccg tttctctgct
    12961 aatgcctcta agtctaagca agctacttca cgtaagaaga tgttggataa aatcgagttg
    13021 gaagaaatca ttccttctag ccgtaagtat ccatttatca acttcaaatc agaacgtgaa
    13081 atcggtaatg acctcctaac agttgaaaac ttaaaagttg tcatcgatgg tgaaacgatt
    13141 cttgacaata tcagctttat cctgcgtcca ggtgacaaga ctgctcttat tggtcaaaac
    13201 gacatccaaa caactgctct cattcgtgct cttatgggcg atattgaata tgaaggtact
    13261 gtcaagtggg gtgtcactac tagtcaatcc tacttaccaa aagacaatac tcgtgacttc
    13321 gatacaaacg aatctatcct tgattggctc cgtcaatttg ccagcaagga agaagatgac
    13381 aataccttct tgcgcggttt cttgggacgt atgctcttct cgggtgatga ggttaacaaa
    13441 cctgtaaacg tcttgtcagg gggcgaaaaa gtgcgcgtga tgttgtcaaa actcatgctc
    13501 ctcaagtcaa atgtcttggt cttagacgat ccaaccaacc acttggactt ggaatcaatt
    13561 tccagtctaa acgatggttt gaaagctttt aaagagtcta tcatctttgc cagccacgac
    13621 cacgaattta ttcaaacttt agcaaaccat atcatcgtca tttctaaaaa cggtgttatc
    13681 gatcgaatcg acgaaactta tgatgaattc ttagaaaatg ctgaagtaca ggctaaagta
    13741 caagaacttt ggaaagcata ataaaaaggc gatttattcg ccttttcttt taaatctatg
    13801 aaaaaaatat ttacaaaaac atccatttat tatctcttct ctttccttat tccgctgact
    13861 attatttcta tcgtcttagc atttcaagga atctggtggg gaagtgatac aacaatattg
    13921 gccagtgatg gcttccatca gtatgttatt tttaatcaaa cattacgaaa tactttacac
    13981 ggagagggct ctttatttta cacattttca agtggtttag gactcaattt ttatgctcta
    14041 tcctcctatt acctaggttc attcctatct ccaattgtct ttttctttga tttacaatcc
    14101 atgcctgacg ctatctatct tgtcactatt gtcaaatttg gattgactgg gttgtcaact
    14161 tatgtcagcc taaagggtat ccataaaaat ttgaaagaag aatgggcact gttactcgct
    14221 actagttttt ctctgatgag ttttagtaca agtcaattag aaataaacaa ctggctagac
    14281 gtttttatac tcctcccact cgttcttctt ggattgcatc gattattaaa aaaacagggt
    14341 ccgattctct actacataac attgacatgc ttgtttatcc aaaactatta cttcgggtat
    14401 atggtggcta tttttctaac attatggaca ttggttcaat tatcatggat agatagtcag
    14461 agaatcaaaa gatttatcaa ctttacaata gtgtcaattt tatctgctct aagcagcatg
    14521 tttatgttgt taccaaccta cttggattta aaaactcacg gtgagacatt tacaaaaatt
    14581 gtcaacctaa aaaccgaaga ctcttggtat ctggacttct ttgcaaaaaa cttagttggt
    14641 agctttgata caacaaaatt cggttctatt cccatgatct ctgttggtct cgttccacta
    14701 atactcgctt tattattctt tacattaaaa gaaataaaac caactgtcaa actctcctat
    14761 gctctattct ttacattcat tatttcaagt ttctacctac aaccactcaa tcttttttgg
    14821 caaggtatgc atgcgccaaa catgttcctc tatcgttatg catgggctct atcaataacc
    14881 gttatctatt tagcagcaga gacattggta cgactacgtc aagtaagtat taaaaatttt
    14941 actctgattg tttcattttt actcatttgc tttgcttcta cctttatttt tagagatcat
    15001 tatgagtttc taatggatgt aaatttccta ctcacactag aatttctaat agcctacttc
    15061 attctttttg tagcaatgat tcactataaa tcatccttaa aatggattaa tattgtttta
    15121 ttgttcttca ctttcttaga acttggatta catagtcatt atcaggttca ggggatttct
    15181 gatgaatggc atttccctag ccgatcaaac tatgaagaaa aattgacaga tattgacagt
    15241 attgtaaagt ctacaaagac tacaactgat tcattttatc gtatagaacg tctattacca
    15301 caaactggca atgatagcat gaaattcaat tacaacggta tttctcaatt ctcctccatt
    15361 cgaaatcgtg cttccagctc agtactagat aagctcggtt tccgttcaga cggtaccaat
    15421 ttgaatcttc gttatcagaa taatacaatt attgctgata gcctattcgg aatcaaatat
    15481 aatttagcta ctacggaccc aaataagttt ggtttcacac tgaatcagag tcagtctact
    15541 attaatcttt acgaaaatag ttttaatcta gggttagccc tattgactga agggatttac
    15601 aaagatgtca attttacaaa tctgactctc gataatcaaa caaattttct taatcaacta
    15661 acagggctat ctcaaaaata ctaccacact ttatcagatg ttgtttcaca aaatacagtt
    15721 gaactgagca atcgaatgac tgtcaacaaa gttgacaatg aggatgctgc aaaagcaact
    15781 ttcttagtaa atatacctgc aaatagccaa gtatacttaa atttgccaaa tttaacattc
    15841 tcaaatgaga atcaaaaaaa ggttgtcatt actgtcaata atcagtcaag tgagtttaca
    15901 ctagataatg ctttctcttt cttcaatgtg gggagcttta ctacagatgt acaagttcaa
    15961 gtcgatgtat attttcctga aaataatcaa atttcttttg ataaacctca attttatcga
    16021 ttggacttat tagctttcca acaggctatt tccattctcc aagaaaaaca agtagtaaca
    16081 aaaactgatg gtaataaagt aaccgttgat tttgtaaccg ataaagaagc ctcgctcctc
    16141 cttactttac cctatgataa aggatggaat gcaaccattg atggtaaacc tatcaaaatc
    16201 caaaaagcac aagagggttt tatgaaagtg gatgtaagtc caggtcaaac taaactagtt
    16261 ttaacctttg taccaaatgg tttctatcta ggtttactga tttctttggg tgcagttttt
    16321 gtatttttct cctatcaatt cattggatac tattattcta agaaccgaga atcctaaact
    16381 ttctcggttt tttcttgtaa aaaacaaaaa accttgattt ctcaaggttt cctatgcttt
    16441 atctactccg ccaacagata attatacgtt aaaataagtt aaaatatata acaaaaa
//
LOCUS       DBNFCX010000046        15972 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.046, whole genome shotgun sequence.
ACCESSION   DBNFCX010000046 DBNFCX010000000
VERSION     DBNFCX010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 15972)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15972)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15972
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.046"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            174..1286
                     /gene="glf"
                     /locus_tag="AC1PJC_001328"
     CDS             174..1286
                     /gene="glf"
                     /locus_tag="AC1PJC_001328"
                     /EC_number="5.4.99.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008767 - UDP-galactopyranose mutase
                     activity [Evidence IEA];
                     GO_process: GO:0009273 - peptidoglycan-based cell wall
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-galactopyranose mutase"
                     /protein_id="HIP6620315.1"
                     /translation="MKKYDYLVVGAGLFGAVFAHEAAKKGKKIKVIEKRDHIAGNIYT
                     KEVEGIQVHEYGAHIFHTSEKEIWDYVNQFAEFNRYTNTPVANYKGEIYNLPFNMNTF
                     NKLWGVVTPAEAEAKIAEQRAVLGERTPENLEEQAISLVGTDIYEKLIKSYTEKQWEK
                     PCTELPAFIIRRLPVRLTYDNNYFNDTYQGIPIGGYTQIVEKMLEHENIDVETNVDFF
                     ANKEDYLATYPKIVFTGMIDEFFDYQLGELEYRSLRFETEVLDMENYQGNAVVNYTDS
                     ETPYTRIIEHKHFEFGTQEKTIITREYSKTWKRGDEPYYPVNNDRNNKLYTAYKRLAE
                     QQENVIFGGRLGHYRYYDMHQVIGAALQCVRNEVGE"
     gene            complement(1388..1933)
                     /locus_tag="AC1PJC_001329"
     CDS             complement(1388..1933)
                     /locus_tag="AC1PJC_001329"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008752 - FMN reductase [NAD(P)H] activity
                     [Evidence IEA];
                     GO_function: GO:0008753 - NADPH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA];
                     GO_function: GO:0052873 - FMN reductase (NADPH) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HIP6620316.1"
                     /translation="MANVLFLVGSLRDGSFNHQMAKKAEAFLADKAQVSYIDLAKIPL
                     FNQDIETPILPEIAELRAKVDAADAIWIFSPVYNYAIPGIVKNALDWLSRSLDLSNPK
                     GPSILQDKITTVSAVANSGHDHLFKDFQHLLPFIRTQIAGEFTGSTINPEAWGTGVLE
                     LSDETRTKLEQQAADLLAAIQ"
     gene            complement(1996..2445)
                     /locus_tag="AC1PJC_001330"
     CDS             complement(1996..2445)
                     /locus_tag="AC1PJC_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HIP6620317.1"
                     /translation="MRTVEQSLNENKHALHSLVVFRRAANTITKSELETIKKYGLTVC
                     QFGVMEALYNKGNLRIQDLIDKLLSTSGNMTVVIKNMIRDGYIYKTIDTNDRRASLIA
                     LTPLGRETIEKILPEHYDHVGEIFSVLSSEEQDQLAEILKKFKNQQT"
     gene            2659..3156
                     /locus_tag="AC1PJC_001331"
     CDS             2659..3156
                     /locus_tag="AC1PJC_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5590 domain-containing protein"
                     /protein_id="HIP6620318.1"
                     /translation="MEKKIFQLLEVLATKKGQLIAGSFILLSVMTFSIFVIWDLAAKP
                     FSDVQNHAISVARDYADIEVVDDVSIYNGAETYFSVQGKTSQGEMIAVIIPEETNTVY
                     VYPMANGISKEEAQAVATENGAGEIEKSVLGYRDAKPIWEVKSGTAYYLVEFETGNFI
                     KREGL"
     gene            3153..4334
                     /locus_tag="AC1PJC_001332"
     CDS             3153..4334
                     /locus_tag="AC1PJC_001332"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002267262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HIP6620319.1"
                     /translation="MSKLSRRVLEMEESVTLAAGARAKALKAEGRDILELTLGEPDFV
                     TPKNIQEAAIKSIEDGKASFYTVASGLPELKDAVNTYFENFYGYSIERNQVVLATGAK
                     FVLYAFFAAVINPGDEVIIPTPYWVSYADQIKMNDGVPVFVTATEEHNFKVTVEQLEA
                     ARTDKTKVFLLNTPSNPTGMIYSREELEAIGNWAVEHDILILADDIYGRLVYNGNSFT
                     PISSISESIRQQTIVVNGVAKAYAMTGWRVGFAVGNPEIIAAMSKIVGQTTSNLTAVA
                     QYAAIEAFTGPQDTVETMRQAFEERLNTIYPLLAEVPGFEVIKPEGAFYLFPNVKKAM
                     EMKGYTDVTEFTTAILEEVGVAMVTGAGFGAPENIRLSYATDMDTLKEAVARLHMFMK
                     K"
     gene            4349..5695
                     /gene="asnS"
                     /locus_tag="AC1PJC_001333"
     CDS             4349..5695
                     /gene="asnS"
                     /locus_tag="AC1PJC_001333"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000038477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004816 - asparagine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006421 - asparaginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HIP6620320.1"
                     /translation="MSRKLITINQVKDYVGQEVTIGAWVANKSGKGKLAFLQLRDGTA
                     FFQAVAFKPNFIEKFGEEAGTEKFEVAKRLSQETSVYVTGIVKEDERSKFGYELDVTD
                     LEVIGESQDYPITPKEHGTDFLMDNRHLWLRSRKQVAIQQIRNAIIYATYEFFEKNGF
                     IKFDSPILSGNAAEDSTELFETDYFGQPAYLSQSGQLYLEAGAMALGRVFDFGPVFRA
                     EKSKTRRHLTEFWMMDAEYSFLSHEESLDLQEAYVKALIQGVIDRAPQALETLERDVD
                     ALKRYIAEPFKRVAYDDAITLLQEHEADEDTDYEHIEHGDDFGSPHETWISNYFGVPT
                     FVVNYPASFKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSMREDNYDALVAKMDEL
                     GMDKSEYEFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRMLHRLHP"
     gene            5799..7118
                     /locus_tag="AC1PJC_001334"
     CDS             5799..7118
                     /locus_tag="AC1PJC_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HIP6620321.1"
                     /translation="MKQESLGKEIIRLALPATVENIFQTLVGFVDTLLIAKLGLVAVT
                     AVGLANTILNVYLAVYMALGVGATALIARSIGAGDRESVTFHVRQALVLSVGLGLLLG
                     LLSLVFGRQMLVLMGADAESLAGAQAFFYWVGGLTIFQALMTILGTILRASGDTVSPM
                     KISLLTNGFNVVLDYFLIFGIGSWSGLGIVGTALGTVLARLLGTVLLYRKVQQTDLAV
                     DLKQLFHLGSPKEMVDLTLPAAAERLVMRLGQVVYFSLIVGLGTTVYASHMIAGNIES
                     FTYMPAYGLATAAAVLIGQALGKGDILTVRRVAFLSSAYGVAIMFLFGIILFFGAPSF
                     ALLFTKDLEAVRQVVTALRIDAFNQPGLALSLIMAGALQGLGDTKSPLYSTMIGMWGL
                     RVVGVIVLGQMFGLGIAGVWLSILIDLLLRAIFLTWRFHVKTRRLAE"
     gene            7302..7679
                     /locus_tag="AC1PJC_001335"
     CDS             7302..7679
                     /locus_tag="AC1PJC_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HIP6620322.1"
                     /translation="MKTIHTDKAPAAIGPYVQGKVVGNFLFASGQVPLSPETGEVVGE
                     TIQEQTEQVLKNIAAILSEAGTDFDHVVKTTCFLKDMNDFVAFNEVYKTAFSADFPAR
                     SAVEVARLPRDVKVEIEVIAVID"
     gene            7701..8588
                     /gene="rapZ"
                     /locus_tag="AC1PJC_001336"
     CDS             7701..8588
                     /gene="rapZ"
                     /locus_tag="AC1PJC_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HIP6620323.1"
                     /translation="MSDKLHLVIVTGMSGAGKTVAIQSFEDLGYFTIDNMPPTLLPKF
                     LELIRHSQDNNKIALVVDMRSRSFFSEIREVLEEIEGAEDLDFKVLFLDATDSELVAR
                     YKETRRSHPLAADGRVLDGIQLERELLAPLKNMSQNVIDTTELTPRNLRKAISEQFAS
                     QDNQPSFRIEVMSFGFKYGLPLDADLVFDVRFLPNPYYKLELRNLTGLDAPVFDYVME
                     HQESEEFYSHLLGLIEPILPGYQKEGKSVLTIAVGCTGGQHRSVAFAKRLADDLEKNW
                     NVNRSHRDKDRRKETVNRS"
     gene            8585..9559
                     /locus_tag="AC1PJC_001337"
     CDS             8585..9559
                     /locus_tag="AC1PJC_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YvcK family protein"
                     /protein_id="HIP6620324.1"
                     /translation="MRKPKITVIGGGTGIPVILKSLRDKDVEITAIVTVADDGGSSGE
                     IRQALQVTPPGDLRNVLLAMSDMPKLYEQIFQYRFADSDGPLAGHPLGNLIIAGISEM
                     QGSTYNAMRLLTRFFHTTGRIYPSSEQALTLHAIFTDGTEVAGESKISKHNGMINHVY
                     VTNSYNDDEPKASRQVVETIMESDMIVLGPGSLFTSILPNLMISDIGKALKETKAEVT
                     YVCNIMTQRGETEFFSDADHVAILNAHLAEQFIDTVLVNIEPVPQEYMNSNQFDEYLV
                     QVKHDFAGLQKQANRVISSNFLRLENGGAFHDGDLVVEELLNILQVRP"
     gene            9556..10473
                     /gene="whiA"
                     /locus_tag="AC1PJC_001338"
     CDS             9556..10473
                     /gene="whiA"
                     /locus_tag="AC1PJC_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0043937 - regulation of sporulation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein WhiA"
                     /protein_id="HIP6620325.1"
                     /translation="MSFTVQVKEELLLQSSQNKSELSAIIKLSGSLGLASSGLTLSIS
                     TENAKIARHIYELILHFYQIKAEIRHHQKPNLKKNRVYAVLIEDGVNEILNDLHLADS
                     FFGLETGISPLVLENDSWSQAYLRGAFLAAGSVKDPEKGKYQLEIASVYSDHANDLAN
                     LMQKFLLDAKVIERSKGTITYLQRAEDIMDFLLVIGAEETKTEFENVKLLREARNDLN
                     RATNAEAANIAKTVNASMKTINNIIKIMDTIGLDQLSGDLQEIAQLRIQHPDYSIQQL
                     ADSLTVPITKSGVNHRLRKINKIADELTE"
     gene            10758..11453
                     /locus_tag="AC1PJC_001339"
     CDS             10758..11453
                     /locus_tag="AC1PJC_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HIP6620326.1"
                     /translation="MISNEQYDYLRAHPTFERLTRDSFDQLAKHIRFRKIPKGQIFFY
                     AEDPRDYLFVLYKGYARIEQYDETDSFTYLDYIRQGGAFPFGDMFQDKPYHYTAIAIT
                     DLEYFIVPMVLFETLSKINPSQMAYICQKLSKVLRFQELRLRNAMRSKASDRVVQALA
                     LLYWDMCQREQFATLPFEIHIQEISRLAATTRETVSHVLKQLKQDGKIAYSHKQLTYL
                     DIDYFLENLTETH"
     gene            11715..12944
                     /gene="arcA"
                     /locus_tag="AC1PJC_001340"
     CDS             11715..12944
                     /gene="arcA"
                     /locus_tag="AC1PJC_001340"
                     /EC_number="3.5.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016990 - arginine deiminase activity
                     [Evidence IEA];
                     GO_process: GO:0019546 - arginine deiminase pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase"
                     /protein_id="HIP6620327.1"
                     /translation="MSNHPIHVFSEIGKLKKVMLHRPGKEIENLMPDYLERLLFDDIP
                     FLEDAQKEHDAFAQALRDEGVEVLYLEKLAAESLVTPEIREQFIDEYLEEANIRGRAT
                     KKAIRKLLLSIEDNQELVEKTMAGIQKAELPEIPAEEKGLTDLVESSYPFAIDPMPNL
                     YFTRDPFATIGNAVSLNHMYSETRNRETLYGKYIFTHHPEYGGKVPLVYNREETTRIE
                     GGDELVLSKDVLAVGISQRTDAASIEKLLVNIFEQHVGFKKVLAFEFANNRKFMHLDT
                     VFTMVDYDKFTIHPEIEGDLRVFSVTYENDTLHIEEEHGDLAELLAANLGLEKVELIR
                     CGGGDMVAAGREQWNDGSNTLTIAPGVVVVYKRNTITNAILESKGLRLIKIGGSELVR
                     GRGGPRCMSMPFEREDI"
     gene            12944..13384
                     /locus_tag="AC1PJC_001341"
     CDS             12944..13384
                     /locus_tag="AC1PJC_001341"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIP6620328.1"
                     /translation="MPSIERTTIGSEEWQRAASIYVRYKVFVLERGIAKEDEFDQNDI
                     EGRVYANLFIGEEPVSTGRFLPVGPGQARLTRIATLPNFRGKGYGKMIISSLEAYARE
                     TGFHQLDIHSELTAKIFYESVGYQATSEVYQEDGEWCQTLTKFI"
     gene            13403..14416
                     /gene="argF"
                     /locus_tag="AC1PJC_001342"
     CDS             13403..14416
                     /gene="argF"
                     /locus_tag="AC1PJC_001342"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000195397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - L-arginine biosynthetic process
                     via ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HIP6620329.1"
                     /translation="MTNVFKGRHFLAEKDFTRAELEWLIDFSAHLKDLKKRNIPHRYL
                     EGKNIALLFEKTSTRTRAAFTVASIDLGAHPEYLGANDIQLGKKESTEDTAKVLGRMF
                     DGIEFRGFSQKMVEELAEFSGVPVWNGLTDAWHPTQMLADYLTVKENFGKLEGLTLVY
                     CGDGRNNVANSLLVTGAILGVNVHIFSPKELFPEEEVVALAEGFAKESGARVLITDNA
                     DEAVKGADVLYTDVWVSMGEEDKFAERVALLKPYQVNMELVKKAENENLIFLHCLPAF
                     HDTNTVYGKDVAEKFGVEEMEVTDEVFRSKYARHFDQAENRMHTIKAVMAATLGDPFV
                     PRV"
     gene            14731..15678
                     /gene="arcC"
                     /locus_tag="AC1PJC_001343"
     CDS             14731..15678
                     /gene="arcC"
                     /locus_tag="AC1PJC_001343"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003025409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008804 - carbamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HIP6620330.1"
                     /translation="MANRKIVVALGGNAILSSDPSAKAQKEALVQTAKHLVKLIKNGD
                     DLIITHGNGPQVGNLLLQNLAADSEKNPAFPLDSLVAMTEGSIGFWLQNALENELIKE
                     GIEKDVASVVTQVIVDKNDPAFENLTKPIGPFYTEAEAKAEAEKTGATFKEDAGRGWR
                     KVVASPKPVGIKEIGTIRTLLNAGEVVVAAGGGGIPVVQEVDGTLTGVEAVIDKDFAS
                     QCLAELVDADLFIVLTGVDYVFVNYNKPDQEKLETVTVAELEEYIKQNQFAPGSMLPK
                     VEAAIAFVNNKPQSKAVITSLENLGALIESDSGTIIVKG"
BASE COUNT         4577 a         2944 c         3752 g         4699 t
ORIGIN      
        1 tgaaggttgt attgtctgtt ataatattgg atattgtaag ctttaagtga aaggttttag
       61 ggaagagatt atcacaactc attctttatt ggttatgaga cgatggtata aatgatagtc
      121 tagtaaaaga tttggagaaa tgacttccct agaaagttaa atgtaaaaac aatatgaaaa
      181 aatacgatta tctagttgta ggtgctgggc tgttcggtgc ggtctttgct catgaggcag
      241 ctaaaaaggg taaaaaaata aaggttatcg aaaaacgaga ccacattgca ggtaacatct
      301 ataccaaaga agtagaaggt attcaagtcc atgaatatgg cgcacatatc ttccatactt
      361 ctgaaaagga aatctgggat tatgtcaacc aatttgcgga gttcaaccgc tatacaaaca
      421 caccagtcgc taactacaag ggtgagattt acaatcttcc cttcaacatg aataccttta
      481 acaagctttg gggtgtggtg actcctgctg aagctgaagc gaagattgca gagcaacggg
      541 ctgtattggg agaaagaaca cctgagaact tggaagagca agccatctca ctagttggta
      601 cagacatcta tgaaaaattg atcaagtcct acaccgagaa acaatgggaa aaaccgtgta
      661 cggagttacc tgccttcatc atccgtcgtt tgcccgtgcg tttgacttat gataataact
      721 actttaacga tacttatcaa ggtattccaa tcggtggcta cacgcagatt gttgaaaaaa
      781 tgttggaaca tgaaaatatc gatgtggaga caaatgttga tttctttgcc aataaggaag
      841 actatttagc tacctatccg aagattgtct ttacaggaat gattgacgag ttctttgatt
      901 accaacttgg tgaattggag taccgtagtc ttcgatttga gacagaagta ttggatatgg
      961 aaaactacca agggaatgcg gttgtcaact atacagatag cgagacacca tatactcgaa
     1021 tcatcgaaca caaacatttc gagttcggta cacaagaaaa aaccattatt acacgcgagt
     1081 attcgaagac ttggaaacgt ggagatgagc catactatcc agtcaacaat gaccgtaata
     1141 acaaactcta tactgcctat aagcgtcttg cggagcaaca agagaatgtc attttcggtg
     1201 gacgtctagg tcactaccgt tactacgata tgcaccaggt aattggagct gccttgcagt
     1261 gcgtgagaaa tgaagttggg gaatgatttt gagaagtcat caaagtagta attgattctt
     1321 ggcagaagtc ggaatgctct ctaaatgtta atcaaaaaaa aaccagaatt tctggttttt
     1381 ttgattatta ttgaattgct gccaacaggt cagctgcttg ttgttcgagt tttgttcgag
     1441 tttcgtcaga taactctaat acacctgttc cccatgcttc tggattgatg gttgaacctg
     1501 taaattcacc agcaatctga gtacggataa atggaagaag gtgttggaag tctttgaata
     1561 ggtggtcgtg accactgttt gcgacggcag agacagttgt gattttatct tgtaggatag
     1621 atggtccttt tggattggat aaatcgagcg aacgactgag ccaatcgaga gcatttttta
     1681 cgatgcctgg gattgcatag ttatatactg gtgagaaaat ccagatagca tccgcagcgt
     1741 ctacttttgc gcgcagctct gcaatttcag gaaggatagg tgtctcgatg tcttggttga
     1801 ataggggaat ttttgcaaga tcaatgtaag atacttgagc cttatcagcc aagaacgctt
     1861 cagctttttt tgccatttga tggttaaaag aaccgtcacg tagtgaacca actaaaaaca
     1921 atacgtttgc catgatggcc tccttttcat aaaaacataa atttagtata tcgtatttgt
     1981 cttttgttgg caatcctagg tctgctggtt cttgaatttt ttaagtatct cggctaattg
     2041 gtcttgttct tctgaactaa ggacagaaaa aatctctcca acgtgatcat aatgctctgg
     2101 aaggattttt tcaatggttt cgcgtccaag tggagtgaga gcaatcaagg aagcacgacg
     2161 gtcatttgta tcgatagtct tgtagatata accatctcga atcatatttt ttataacgac
     2221 agtcatgttg ccggatgtac ttaataattt atcaattaag tcttgaattc gcagatttcc
     2281 tttgttgtag agtgcctcca tcactccaaa ctgacaaacg gtcagtccgt attttttgat
     2341 tgtttctaat tctgattttg tgatagtatt agctgctctg cgaaagacga ctagactgtg
     2401 aagtgcatgc ttgttctcgt ttaaagattg ttcaacagtt ctcatgagaa tattttagca
     2461 ataaatagtt cggttatcaa gcaaaaaaag ttaaatccta tattcatagg taaagtactt
     2521 tctatagcat agaggagctg aactgtgggt cccagttctt atattcgttc tctgtctgaa
     2581 ggagaatgaa agtttattca caattcaatt acggaaaaaa tggaaatatg ctttaacttg
     2641 tagtataata ggactactat ggaaaaaaag atttttcaac ttttggaagt attggcaacg
     2701 aagaagggac agctgatagc tggttccttt atactcctaa gtgtcatgac tttttcgata
     2761 ttcgttattt gggaccttgc agctaagcct ttttctgatg tacagaatca cgctatttct
     2821 gtagctcgag actatgcgga tatagaggtt gttgatgatg tctctatcta taatggggca
     2881 gaaacatact ttagcgtgca aggaaagacg agtcagggag aaatgattgc agttatcatt
     2941 cctgaagaga caaatactgt gtacgtttat ccaatggcga atggtatttc taaggaagaa
     3001 gcgcaggcag tcgctacaga gaatggtgct ggagagatag aaaaatcggt tcttggctac
     3061 agagatgcga agccgatttg ggaagtcaag tcaggtactg cctactattt agttgaattt
     3121 gaaacaggga actttatcaa acgggagggc ttatgagcaa gttatcaaga cgagtcttag
     3181 agatggaaga aagtgtaact ctggcagcag gtgcgcgtgc aaaagccttg aaggcagaag
     3241 gacgtgatat tttagagctg accttgggtg agccagactt cgtcacaccg aaaaatattc
     3301 aagaagctgc tattaagtct atcgaagatg gtaaggcgag tttttacacg gtagcttcag
     3361 gacttccaga attgaaggac gcagtcaata cctactttga gaatttctat ggctactcta
     3421 tcgaacgcaa tcaagtcgtt cttgcgacag gtgctaagtt tgttctttat gccttctttg
     3481 cggcggtcat caatcctggt gatgaggtga ttattccgac accttactgg gtttcttatg
     3541 cagatcaaat caagatgaat gatggggtgc ctgtctttgt cactgcgaca gaagagcaca
     3601 atttcaaggt aacggttgaa cagctggaag cggctcgtac agataagacc aaggtattcc
     3661 tactcaatac tccttctaat ccgacgggta tgatttacag tcgtgaggag ttggaagcta
     3721 ttggaaactg ggctgtagag cacgatattc tcatcttggc agacgatatt tacggtcgtt
     3781 tggtctataa cggcaatagc ttcacaccga tttctagtat ttcagaaagc attcgtcagc
     3841 agaccattgt tgtcaatggg gtggctaagg cctatgccat gacaggttgg cgggttggat
     3901 ttgccgttgg taatcctgaa atcattgcgg ctatgagcaa gattgtcgga caaacgactt
     3961 caaacctgac agcagttgct cagtatgcgg ccattgaggc ctttacaggt ccgcaagata
     4021 cggtagaaac catgcgtcag gcctttgaag agcggctcaa taccatttat cccttgctgg
     4081 cagaagtgcc tggttttgaa gtgattaagc cagaaggtgc cttttatctc ttcccaaatg
     4141 tcaaaaaggc tatggaaatg aagggctaca cagatgtgac tgaatttacc acagccattt
     4201 tggaagaagt gggagttgca atggtgacag gtgctggttt tggagctcct gagaatatcc
     4261 gcctcagcta tgcgacagat atggacacgc tcaaagaagc agtggctcga ctacatatgt
     4321 ttatgaaaaa ataaaaagag gaaaaataat gtctagaaaa ttgattacca ttaaccaagt
     4381 aaaagattat gtcggtcaag aagtgaccat tggtgcctgg gttgccaaca agtctggaaa
     4441 gggcaagtta gccttcctgc agttgcgtga cggaacagcc ttcttccaag ctgttgcttt
     4501 caagccaaac tttatcgaga aattcggtga agaagcgggt acggaaaaat ttgaagttgc
     4561 caagcgtctt agccaagaaa cctctgttta cgtgacaggt attgtcaagg aagacgagcg
     4621 ttctaagttt ggatatgagt tggatgtgac agaccttgaa gtcattggtg agtcacaaga
     4681 ttacccaatc acaccaaaag aacacggaac ggacttcctt atggacaacc gtcacctctg
     4741 gttgcgttct cgtaaacagg tcgctatcca gcaaatccgt aacgccatca tctatgcgac
     4801 ttatgaattc tttgaaaaga atggctttat caagtttgat agcccaatct tgtctggaaa
     4861 tgcggcagaa gattcaacag aattattcga aacagactac tttggtcaac cagcttatct
     4921 cagtcaatca ggtcagcttt acctggaagc tggtgctatg gcccttggtc gtgttttcga
     4981 cttcggtcct gttttccgtg cggaaaaatc aaaaactcgc cgtcacttga ctgagttctg
     5041 gatgatggat gccgagtatt cattcctcag ccatgaagag tcacttgact tacaagaagc
     5101 ctatgtcaaa gccttgatcc aaggtgttat cgaccgtgct ccacaagcgt tggaaactct
     5161 tgagcgtgat gtagatgccc tcaaacgcta tattgcagaa ccatttaaac gtgtggctta
     5221 tgatgatgcc attacccttt tgcaagagca tgaggctgat gaagatacgg actacgaaca
     5281 catcgagcat ggggatgatt ttggttcgcc acatgaaact tggatttcaa actactttgg
     5341 tgtaccgact ttcgttgtta actatccagc aagcttcaag gccttctaca tgaaaccagt
     5401 tcctggtaat ccagagcgcg tgctttgtgc agacttgctt gcaccagaag gctacggtga
     5461 aatcatcggt ggttctatgc gtgaggacaa ttacgatgcc ttggtagcca agatggacga
     5521 gctcggcatg gacaagtcag aatacgaatt ctaccttgac ctccgtaaat acggatctgt
     5581 gccacacggt ggcttcggta tcggtatcga gcgtatggta actttcgtcg ctggtacaaa
     5641 acacatccgt gaagccattc cgttcccacg tatgttgcac cgcttgcatc cgtaagcaaa
     5701 tcaatagata tacaaacaga ctacaaatgt ggtctgtttt cttgcttttt tactagactt
     5761 tatttataat tgttctaaat aaaaccgtgg agaggaaaat gaagcaagaa agtttaggaa
     5821 aagaaattat tcgtttggcc ttgcctgcta cggtggaaaa tatttttcag accttagttg
     5881 gttttgtgga taccctctta atagccaagc tagggctggt agcggtgacg gcagttggtc
     5941 tagccaatac gattttgaat gtctatttgg cggtctatat ggctttggga gttggggcaa
     6001 cggctttgat tgctcggtct attggtgcgg gagataggga atctgttacc tttcatgtcc
     6061 gtcaagcctt agtgctttca gtaggtctag gtctgctatt gggtttacta tcccttgttt
     6121 tcgggcggca gatgctggtc ttaatgggag cagatgcgga gagtttggct ggtgcccagg
     6181 catttttcta ctgggttggt ggcctgacga ttttccaggc tctgatgacc attttgggaa
     6241 caatcctgcg ggcatctggc gacacggttt cccctatgaa aatcagtctt ctgaccaatg
     6301 gttttaatgt ggtcttggac tatttcttga tttttggtat tggttcttgg tcaggtttgg
     6361 ggattgtagg gacggccttg ggaaccgtct tagctcgctt gcttggtact gtcttgctgt
     6421 atcgtaaggt acagcagact gatttggcag ttgatctcaa acaattgttc cacttgggaa
     6481 gtcctaagga aatggtggat ttgaccctac ctgcagcagc cgaacgcttg gttatgcggt
     6541 tgggacaggt ggtctatttc agtttgattg tggggctggg gacgactgtc tatgcttctc
     6601 atatgattgc aggtaatatc gagagtttta cctatatgcc tgcctatggt cttgcgacag
     6661 cggcggcggt tttgatcggt caagcattgg gaaaggggga catcctcaca gttagacgag
     6721 tcgcatttct cagctctgcc tatggtgttg ccatcatgtt cctgttcggt atcatcttat
     6781 ttttcggagc tccaagtttt gctctgctat ttaccaaaga cctagaagcc gtccgtcaag
     6841 tcgtcacagc cttacggatc gatgctttca accagccagg ccttgcgctt tctttgatca
     6901 tggctggcgc tctgcaggga ttgggggata ccaagtcgcc gctctactcc acaatgatag
     6961 gaatgtgggg gctgcgcgtc gtaggtgtta tcgtcttagg tcagatgttc ggtttaggaa
     7021 ttgccggcgt ctggctgtcg attttgattg acctgctctt gcgagcgatt tttctgactt
     7081 ggagatttca tgtaaaaaca agaagactgg ctgaataggc tagttttttg gtataagcag
     7141 gtagtattaa aagtagatta tggattgcct tatttcatgt tggtgatact atctcaattc
     7201 cttttttata aaagaaaata ggtgtaggat agtagtaggt gagctgtttt atacagaact
     7261 tgtgctataa tagatataaa aaattaaaag gagatagaga tatgaaaacc attcacacag
     7321 ataaggcgcc tgcagcaatt ggcccatacg ttcaagggaa ggttgttgga aatttcctat
     7381 ttgcctctgg tcaagttcct ttgtcacctg aaactggtga agtggttggt gaaaccattc
     7441 aggagcagac tgagcaagtc ttgaaaaata tcgcagcaat tttatcagaa gcaggaacag
     7501 actttgacca tgtggtgaag acgacttgtt tcctaaaaga tatgaatgat tttgtagcct
     7561 ttaatgaagt ttataaaaca gctttctcag cagattttcc agctcgttca gcggtggaag
     7621 ttgcacgctt gccacgtgat gttaaggttg agattgaagt tattgcagtt attgattaga
     7681 agagaaaagg agggaatgtc atgtcggaca aactccattt agtgattgtg acagggatgt
     7741 cgggagctgg taagacagta gccattcagt cttttgagga cttgggctat tttaccattg
     7801 ataatatgcc accgactctc ttgccaaagt ttttagagtt gattcgccat agccaggata
     7861 acaataagat tgctcttgtt gtagatatgc ggagtcgctc cttcttctcg gagattcgag
     7921 aggtgttgga agagattgag ggggcagagg atttagattt taaagtccta ttcttggatg
     7981 cgacggatag tgaattggtt gctcgctata aagaaactcg tcgttcccat cctttggcgg
     8041 ctgatggtcg tgttttggac gggattcagc tagaacgtga acttttggct cccttgaaaa
     8101 atatgagcca gaatgtcatt gatacgacag agttgactcc tcgcaatctg cgtaaggcaa
     8161 tctcagagca gtttgctagt caagataatc agccgtcgtt tcgcatagaa gtgatgtcct
     8221 ttggtttcaa atatggtctg cctctggatg cggacttggt ttttgacgtt cggttcttac
     8281 caaatcccta ctacaagttg gagttgcgta atttgactgg tctggatgct cctgtctttg
     8341 actatgtcat ggagcatcaa gaatcggaag agttttatag tcatttgctc ggcttgatag
     8401 aaccgattct tcctggttat cagaaggaag gaaaatcagt tctaacgatt gccgttggat
     8461 gtacgggtgg tcagcataga agcgtagcct ttgctaaacg tttggcagac gatttagaga
     8521 aaaattggaa tgtcaatcgt agtcatcgtg ataaggacag acggaaggag acggtcaacc
     8581 gctcatgaga aaaccaaaga ttacagttat cgggggcggg actggtattc cagtcatttt
     8641 gaagagtttg cgggataagg atgtagagat taccgctatc gtgacggtag ctgatgacgg
     8701 aggatcttcg ggggaaattc gtcaggcttt gcaggtgacc cctccaggtg atttgcgtaa
     8761 tgtccttttg gctatgtcgg atatgcccaa actttatgaa caaattttcc agtatcgttt
     8821 tgcggattca gatggaccct tggctggtca tccactaggg aatctcatca ttgctggcat
     8881 ttcagaaatg cagggttcaa cctacaatgc gatgaggttg ttgacgcgct ttttccatac
     8941 gacagggcgg atttatccat ctagcgaaca ggccttgacc cttcatgcta tttttacaga
     9001 tgggaccgag gtggcaggtg agagcaagat ttccaagcat aatgggatga ttaatcatgt
     9061 ctatgtgaca aattcttata atgatgatga accgaaagcc agtcgccagg tagttgaaac
     9121 gattatggaa agtgacatga ttgtacttgg accgggttct ctttttacct caatcttgcc
     9181 gaatctgatg atttctgaca ttggcaaagc cctaaaggaa accaaggctg aagtgaccta
     9241 tgtgtgcaac attatgaccc aacggggaga gactgagttt ttctcagatg cggaccacgt
     9301 ggcgattctc aatgcacacc tagctgaaca attcattgat acagttttgg tcaatattga
     9361 gccagttcca caagagtata tgaatagcaa tcagtttgat gaatacttgg tacaggtaaa
     9421 acacgatttt gcaggtttac aaaaacaggc taatcgtgtg atttcttcga attttcttcg
     9481 tttggaaaat ggcggagctt tccatgatgg tgacttggtg gtagaagagt tgctcaatat
     9541 tttgcaggtg cggccatgag ttttacagta caagtaaagg aagaattgct gcttcagtct
     9601 agccaaaata agagcgagct atctgctatt atcaaattat caggtagttt gggcttagct
     9661 tcatcaggct tgactctttc tatcagcacg gaaaatgcaa agattgcccg tcacatttat
     9721 gaactgatac tccatttcta ccaaattaag gctgagattc gccatcatca aaaacctaat
     9781 ctcaaaaaga atcgtgtgta tgcagttttg atagaagacg gcgtgaatga gatattgaac
     9841 gatttgcatt tggctgatag cttctttgga ttagagacgg ggatttctcc cttggttttg
     9901 gaaaatgatt cgtggagtca agcctatctt cgtggagcat ttttagcagc aggctctgtt
     9961 aaggatcctg aaaaaggaaa ataccagctt gaaatagctt ctgtctatag tgaccatgcc
    10021 aatgacctgg ccaatctgat gcagaaattt cttttggatg ccaaagtcat tgagcgaagt
    10081 aagggaacca ttacctatct gcaacgtgca gaggacatta tggattttct tttggtgatt
    10141 ggagcagaag agacaaagac agaatttgag aatgttaaat tgcttcgtga ggctcgcaat
    10201 gacctaaatc gagctacaaa tgcggaagcc gctaatattg caaagacggt caatgctagt
    10261 atgaaaacaa tcaataatat tatcaaaatt atggatacta tcggtctaga tcagttgtca
    10321 ggtgacttgc aggagattgc ccagttgcga attcagcatc cagactattc cattcagcaa
    10381 ttggcggata gtctaacggt accgatcact aaaagtggtg tcaaccatcg tttgcggaaa
    10441 atcaataaga ttgcggatga attgactgaa tagataggta tacatagaat gctatagaca
    10501 tttgaattaa ctttgatacc tcgtcactct cggcttgccg tactctagta ttgcttgcac
    10561 ctcagttcct tgtctgaaag ttaattcatt cggcgatatt aagactggtt cgagaggacc
    10621 agtttttttg tatgttgtga tagcaatctt cttcactgga atgatcctgt tttatgaatt
    10681 tttcagtaat gattagcata gaacgttaat atatgttaaa atagatagaa ggatacttta
    10741 gctagaaagg agttttgatg ataagcaacg aacaatatga ttatctaagg gcacatccaa
    10801 cttttgaacg tttgacacgt gatagctttg atcaattagc taagcatatt cgttttcgaa
    10861 agattcctaa ggggcaaatc tttttttacg cagaggatcc tagagattat ctatttgtat
    10921 tgtataaggg ctatgctcgg attgagcaat atgatgagac ggatagtttt acgtatttgg
    10981 actatattcg gcagggcggt gccttccctt ttggagatat gtttcaggac aaaccttatc
    11041 attataccgc aattgccata acggacctag agtattttat tgtaccgatg gtcttgtttg
    11101 aaaccttgtc gaagataaat ccgagtcaaa tggcttatat ctgtcaaaaa ttatccaaag
    11161 tacttcgttt tcaagagttg cgcttgcgaa atgcgatgcg ttccaaggca tcagatcgag
    11221 tcgttcaagc cttggctctt ctttattggg atatgtgcca gcgagagcag tttgctacct
    11281 tgccatttga aattcatatt caagagattt cgcgtttagc agctacgaca cgggaaacgg
    11341 ttagccatgt tttgaagcaa ctgaagcagg atggtaaaat tgcttatagc cataaacagt
    11401 taacttattt agatattgat tatttcttag aaaatttgac agaaactcat tgaagtttct
    11461 gtttttttat aaaaaaataa aaattcatat aatgatataa cggagagaat tatgcagaat
    11521 ataggcgata taatcgataa ttatttataa ataaggttaa aaatgtgaag aatttctcaa
    11581 aataaatgtg agcgttttca agtttttgtt tttttgctct gttaaactat ggatgtaaag
    11641 aggaaatgag aggcaggaaa gcgtacggtc ctcctcgttt cccatcatgt ataaatctac
    11701 aaggaggaca gatcatgtca aaccatccaa ttcatgtttt ttcagaaatt ggtaagctga
    11761 aaaaagttat gttacacaga ccaggtaagg aaattgaaaa ccttatgcct gactacctag
    11821 aacgcctact cttcgatgat attccattct tagaagatgc acagaaagag catgatgctt
    11881 ttgctcaagc tcttcgtgat gaaggtgtcg aagtgctcta cttggaaaaa ttagctgctg
    11941 agtcacttgt tacacctgaa attcgtgaac aatttattga tgaatatctc gaagaagcta
    12001 acattcgtgg tcgggcgact aagaaggcaa ttcgcaagtt gttgttgtct attgaagata
    12061 atcaagaact ggttgagaaa acgatggccg gtattcaaaa ggcagaattg ccagaaatcc
    12121 ctgctgaaga aaaaggtttg acagatttgg ttgaatcctc ttacccattt gcaatagacc
    12181 caatgccaaa cctttacttc acacgggatc catttgctac gattggtaat gctgtttctc
    12241 ttaaccacat gtattcagaa acacggaacc gtgaaacctt gtatggtaaa tacatcttca
    12301 ctcatcaccc agaatatggt ggaaaagttc cattggttta caatcgtgaa gaaactactc
    12361 gtatagaggg tggggacgaa ttggttcttt caaaagatgt tttggcagta ggtatttcac
    12421 aacgtaccga tgctgcatca attgaaaaac tattggtaaa tatctttgaa cagcacgttg
    12481 gcttcaagaa agtattggca ttcgaatttg ctaacaaccg taaattcatg catttggata
    12541 cggtatttac catggttgac tatgataagt ttactatcca cccagaaatt gaaggtgatc
    12601 ttcgtgtctt ctctgtaacc tatgaaaatg atacgcttca tattgaagaa gaacatggtg
    12661 acttggcaga acttttggct gcgaaccttg gtcttgaaaa agtagaattg atccgttgtg
    12721 gtggcggtga tatggttgct gctggtcgtg agcaatggaa tgatggttca aatacattga
    12781 ccattgcacc aggtgtggta gttgtttaca aacgcaatac gattaccaat gcaatcctcg
    12841 agtccaaagg gcttcgtttg attaagattg gcggaagcga attggttcgc ggtcgtggtg
    12901 gacctcgttg tatgtcaatg ccgtttgaac gggaagacat ctaatgccaa gtatagaacg
    12961 aacaacaatc ggttcggaag aatggcaacg cgcagcctct atctatgtcc gctataaggt
    13021 atttgttctt gagcgtggta ttgcaaagga agatgaattt gaccagaatg atattgaagg
    13081 aagagtttac gccaatctct ttattggtga ggagcctgtt tcaacgggac gttttcttcc
    13141 tgtcggtcct ggtcaagctc gtctaacccg aatagccact ctaccgaatt ttcgtggaaa
    13201 aggctatgga aaaatgatta tcagctcttt ggaagcttat gcacgtgaaa caggctttca
    13261 tcagttggat atacattcgg agttaactgc aaagattttt tatgagtcag tcggctacca
    13321 agcaacttct gaagtttatc aagaagatgg agaatggtgc cagacattga caaaatttat
    13381 ttaaacatta ggagaagaga caatgacaaa cgtatttaaa ggcagacatt tccttgcaga
    13441 gaaagatttc acacgcgcag aattggaatg gttgattgat ttctcagctc atttgaaaga
    13501 tttgaaaaaa cgcaatattc cacaccgtta tttggaaggt aaaaatattg ccctcttgtt
    13561 tgaaaaaacc tcaacacgta ctcgtgctgc cttcacagta gcatctattg accttggtgc
    13621 ccatccagaa tatcttggtg caaatgatat ccaacttggt aagaaagaat ctacagaaga
    13681 tactgctaaa gttttgggac gcatgttcga cggtattgaa ttccgtggtt tcagtcaaaa
    13741 aatggtggaa gaattggcag aattctctgg tgtgccagta tggaatggtt tgacagatgc
    13801 atggcaccca actcaaatgt tggctgacta cttgactgtc aaagaaaact ttggcaagtt
    13861 ggaaggtttg actttggttt actgtggtga tggccgtaac aacgttgcta actcactttt
    13921 ggtaacgggc gctatccttg gtgtcaatgt ccatatcttc tctccaaaag aactcttccc
    13981 agaagaagaa gtagttgcct tggctgaagg ttttgcgaaa gaaagtggag cacgtgttct
    14041 cattactgac aatgctgacg aagcagtcaa aggcgcagat gttctctata cagacgtttg
    14101 ggtatcaatg ggtgaggaag acaaatttgc agaacgcgtt gccctcttga aaccatacca
    14161 agtgaatatg gaattggtga aaaaagcaga aaatgaaaat ctcatcttct tgcactgctt
    14221 acctgccttc catgatacaa acactgttta tggtaaagat gtcgctgaaa aatttggcgt
    14281 agaagaaatg gaagtaacag acgaagtatt ccgtagcaag tatgctcgtc acttcgacca
    14341 agctgaaaac cgtatgcaca ctattaaagc ggttatggct gctactttgg gggatccatt
    14401 tgttccacgt gtgtaatact cttcgaaaat caaactcata cgttgttgcc tcgatttgat
    14461 gactgaaaag ctccagtgga ggttttcagc ctgttccctt gaagtataaa aggaacggag
    14521 ttctatcttc atatgtcgaa acgaacttcg ctcgctttat ttccaacctc caaaggttcc
    14581 ccgaaccttt ggagcaagtc tgattttgat tttcattgag tatattctct agtcatcgca
    14641 acctccgggg gctggcaccc agccccctta ttttgaggat agatgtgtaa gcgattacta
    14701 tttcgcgaaa gtgaggaaaa agcaagagat atggcaaatc gtaaaattgt agtagccttg
    14761 ggtggcaatg ccattttatc gtctgaccca tcggctaaag cacaaaaaga ggccttggta
    14821 caaacagcca agcaccttgt aaaattgata aaaaatgggg atgaccttat catcacgcat
    14881 ggtaatggtc ctcaggttgg aaatttactt cttcaaaacc ttgctgctga ttcggaaaag
    14941 aacccagctt ttccactaga cagtttggta gccatgacag aaggttcgat tggtttctgg
    15001 ttgcaaaatg ccttggaaaa tgaattgatc aaggaaggca ttgaaaaaga tgtagcatct
    15061 gttgtgaccc aggttatcgt ggataagaat gatccagcct tcgaaaattt gaccaagccg
    15121 attgggccat tctatacaga agcagaagcg aaagcagaag cagaaaagac tggtgcaacc
    15181 ttcaaagaag atgccggtcg tggctggcgc aaagtcgttg cttccccaaa acctgtagga
    15241 atcaaagaaa ttggtaccat tcgtaccctt ctcaatgcag gtgaggtagt cgtagctgct
    15301 ggtggtggag gtattccagt tgtccaagaa gtagatggca ccctgaccgg tgtggaagca
    15361 gttattgata aagactttgc ttcccaatgt ttggcagaat tggttgatgc agacttgttt
    15421 atcgtcttga caggtgtgga ctatgtcttt gttaactaca acaaaccaga ccaagaaaaa
    15481 ttagaaacag ttaccgtagc tgaattggaa gaatatatca aacaaaatca attcgcacca
    15541 ggttccatgc taccgaaagt tgaagcagct attgcttttg taaacaataa gccgcaatca
    15601 aaagcagtca ttacttcatt agaaaactta ggcgctttga ttgaatccga tagcggtact
    15661 atcattgtca aaggctaagc agctatatgt atcgttgagg cttctattta ttgatgtact
    15721 ctgcatgcaa atatagtttt taaactagac gggttattta ttgatggagt taggggagtg
    15781 gaagtgttga tagtcctaca agggttccct ttaatcgaaa catgaaggtc tgggcttcta
    15841 agctccctcc cctctcatcc atttcctatc aagtatctat ctataagcaa tgatttcaga
    15901 taatagactg aaggagatag acatctcttg aagataggtg gatatttgat acggttatta
    15961 cggatacaat tt
//
LOCUS       DBNFCX010000047        15654 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.047, whole genome shotgun sequence.
ACCESSION   DBNFCX010000047 DBNFCX010000000
VERSION     DBNFCX010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 15654)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15654)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15654
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.047"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(200..1792)
                     /locus_tag="AC1PJC_001344"
     CDS             complement(200..1792)
                     /locus_tag="AC1PJC_001344"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006268711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140657 - ATP-dependent activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HIP6620331.1"
                     /translation="MSYHHEPSPFMLPTSHYDEAKADRAVTFINNLSHTKGKWAGKRF
                     DLLPWQEQIVRDLFGIVKEDGNRQFLTAYIEIPKKNGKSELAAAIALYLLYADNEASA
                     EVYGAACDRNQASIVFDVAKQMVQMSRPLEKRSKIMGATKRIVNYSNAGFYQVLSAET
                     GTKHGLNVSGLVFDEIHAQPNRHLYDVLTKGSGDAREQPLFFIITTAGTDRNSICYEL
                     HTKALDILNGRKKDTSFYPVVYGLSDEDDWNDEENWRRANPSLGHTIGIDRVREAYQQ
                     ALDNPAEENVFKQLRLNMWTSSSVTWIPEHVYAKGNDPIQYESLKGRSCYAGLDLSST
                     SDITAFVLVFPPRFEEENYIVLPYFWLPEDTLELRCRRDHVLYDVWERHGYIKTTEGN
                     VVHYGFIEKFIEDLSEIYHIKEIAYDRWNATQMVQNLEGMGLTMVPFGQGYKDMSPPS
                     KELYKLMMEGRIQHGGHPVLKWMGQNVVMRQDPAGNIKPDKEKSVEKIDGIVALIMGL
                     DRCIRHQTDEGSVYDERGILSF"
     gene            complement(1789..2262)
                     /locus_tag="AC1PJC_001345"
     CDS             complement(1789..2262)
                     /locus_tag="AC1PJC_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000290865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase small subunit P27 family"
                     /protein_id="HIP6620332.1"
                     /translation="MAIRGRKPKPTNMKILEGNPGKRPLPTNEVKPKQKAPRCPQWLE
                     DDAKKEWKRMGKILEQMGILTEMDMTAFAGYCQAYARWKEAEEFLSKHGSIIKTPNGY
                     LQQVPQVSISQTNLKIMLKFCEQFGLTPSARNRLATMDAEVGTGDEMEDLLGGIL"
     gene            complement(2313..2543)
                     /locus_tag="AC1PJC_001346"
     CDS             complement(2313..2543)
                     /locus_tag="AC1PJC_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620333.1"
                     /translation="MWEIMTRTVGDRHYVCEFLREDTTDPRNIDGAWIRILTIKRDGE
                     YIYQYRYGNEIDNMDDIDRTVCQAVLDNFNEL"
     gene            complement(2608..2757)
                     /locus_tag="AC1PJC_001347"
                     /pseudo
     CDS             complement(2608..2757)
                     /locus_tag="AC1PJC_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636333.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4314 domain-containing protein"
     gene            complement(2759..3007)
                     /locus_tag="AC1PJC_001348"
     CDS             complement(2759..3007)
                     /locus_tag="AC1PJC_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015057739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620334.1"
                     /translation="MTTTLEKLYEIYPTTASIIPYKEWVIVASKGNKETVVEIYEIVD
                     SLEEFELFECRLNRIYKESIIVTDLGHAVKWAFDMFGE"
     gene            complement(3101..4360)
                     /locus_tag="AC1PJC_001349"
     CDS             complement(3101..4360)
                     /locus_tag="AC1PJC_001349"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HIP6620335.1"
                     /translation="MRLTFLDFFAGVGGFRRGLELAGFKCIGYCEKDKFARKSYEAMY
                     DTKGEWFHDDITSIDQTQLPKADLWCAGSPCQNVSIAGKRAGLYGERSGLFFTFVDLL
                     QSQEEEDKPEWILLENVKGLLSSGGGRDYLDYLTILDEAGYDLEWQVFNSKDYGVPQN
                     RERIYTLGHLRSRGRRKVLPISGESGSHLKQLVGGRQGKRIYDISGVSCTLCGNGGGF
                     GCRTGLYLIDQSLTEPKLTDEARCITARYTAGATKRTAMNSGVLEIQPFLTPNRINKR
                     QNRRRLKEQDEPMFTLTSQDRHGVLEGIKVRNGTKQGYQVAEVGDSVDLSYPNSPTRR
                     ARVGKGIAHNLSCGGQMGAVVWNDRVVKIRRLTPRECFRLQGFSDDLFEKAQAVNSDA
                     QLYKQAGNGVTVTVVYAIGCAILASEK"
     gene            complement(4357..5613)
                     /locus_tag="AC1PJC_001350"
     CDS             complement(4357..5613)
                     /locus_tag="AC1PJC_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HIP6620336.1"
                     /translation="MTSQPTMEIREIRLSELHPASYNPRKKLKKGDKEYEKIKQSLLK
                     FGYVDPIIVNKDLTVIGGHQRLTVLKDLDYETAKCVIVNLSKEDEKALNIALNKISGQ
                     WDDQLLADLLLDLQESDFNLDLTGFEPPEIDDILSNVHDKDLSDDDFDVEEELNKPTF
                     SKRGDIWQLGKHRVICGDSTKAETYGQLLGDKKANLVVTDPPYNVDVEETAGKILNDN
                     MPDSEFYQFLFDMFTQVEKHIESDASIYVFHADTEGLNFRKAFKDAGFYLSGCCIWKK
                     NSLVLGRSPYQWQHEPCLFGWKQKGKHQWFSDRKQTTIWEYDRPKSSKDHPTMKPIPL
                     MAYPIQNSSMRGTIVLDPFLGSGSTLMAADQTGRVCYGIELDEKFVDVIVKRYIESTG
                     NDNVTVLRDGQTLTFDEAYSMMEETV"
     gene            complement(5585..6046)
                     /locus_tag="AC1PJC_001351"
     CDS             complement(5585..6046)
                     /locus_tag="AC1PJC_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIP6620337.1"
                     /translation="MDESQRKQIWKMRAEGLGYGLIGKATGLSRDSVKKYCKRNPALL
                     GHGAATKQMAKADQNDGLRCPQCYQTLKIHKIGRPKKFCSDKCRKVWWTTHSDEHDKS
                     KTAYEDLTCQQCGRSFLSYANQNRKYCSHSCYIQSRFYKGETNDKSTNNGN"
     gene            complement(6345..6710)
                     /locus_tag="AC1PJC_001352"
     CDS             complement(6345..6710)
                     /locus_tag="AC1PJC_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HIP6620338.1"
                     /translation="MPRRPSTPCKLNGCPNLVPYGHKYCENHKANYQLDAKSTKAKGY
                     NAQWNKARLRYLKVHPLCVQCKVKGRLTKATVVDHITPHRGDQEFFWNQCNWQALCKS
                     CHDRKTKTTDRYVEYTYRF"
     gene            complement(6735..7106)
                     /locus_tag="AC1PJC_001353"
     CDS             complement(6735..7106)
                     /locus_tag="AC1PJC_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003083324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620339.1"
                     /translation="MPNPQVSSITVSLFSFMLPMISIDINVEEKLVSIQKFPETETEI
                     ITISNLRLFFFLNQLKRVKLSEWKEYYSNEMEILDGTQWNVSFFMNGRTYNCSGDNNF
                     PREWTLFCRAINRLVKHNYLE"
     gene            complement(7139..8176)
                     /gene="metK"
                     /locus_tag="AC1PJC_001354"
     CDS             complement(7139..8176)
                     /gene="metK"
                     /locus_tag="AC1PJC_001354"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003058380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HIP6620340.1"
                     /translation="MIFTSEQVSSGHPDKLCDQISDAILTECLKHDKDSRVAVETLIK
                     DNHVVMAGEVSTKHFFNLEGIVKKVLEPYGMTDIMVTNLLGLQSKDIAQGVDNGGAGD
                     QALMFGYAVDETPEYLPLPYVLATRVLEKLMSLGHPLLGKDAKAQVSYDYDKNRIDTF
                     LVSIQHTASADLDKVKRIVTEAMMSLALRYRQNLDFKVLVNPTSRFVLGGSFADAGVT
                     GRKIVADTYGGFAHHGGGAFSGKDPSKVDRSGAYMARKIAKDIVREGYAKRCEVQLAY
                     AIGVAEPVSVHVETFGTSRYTAKQLEGMIRERYDLTPRGIIKELNLLNVDYIKTTCFG
                     HFTKDYLPWEK"
     gene            complement(8223..8405)
                     /locus_tag="AC1PJC_001355"
     CDS             complement(8223..8405)
                     /locus_tag="AC1PJC_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017646674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6900 domain-containing protein"
                     /protein_id="HIP6620341.1"
                     /translation="MTKRQQEKLDAIFTRIAQEELQVETLEQRWSDNLDFYDIPVWGI
                     KKALERAYEEGRNSAK"
     gene            complement(8611..9087)
                     /locus_tag="AC1PJC_001356"
     CDS             complement(8611..9087)
                     /locus_tag="AC1PJC_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620342.1"
                     /translation="MDKAEHILTNYNELKSDLEMLKYRLEHFKPVTENEVIGSLVFEK
                     SDEPRVKSTPTNQRSEMIALNFREKMIQENEEQLADLSQRYIRLANDLDNFEMALKFL
                     KGDLYDFAQSMLKTDSNWDSLMREFHISRSTVRNWRRKVLDHVREVYMKMGYSLEK"
     gene            complement(9080..10456)
                     /locus_tag="AC1PJC_001357"
     CDS             complement(9080..10456)
                     /locus_tag="AC1PJC_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006268649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140658 - ATP-dependent chromatin
                     remodeler activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SNF2-related protein"
                     /protein_id="HIP6620343.1"
                     /translation="MKLTLHNYQVVAKDFIIGHPHAAVILDMGMGKTATTLSAVNELM
                     FDRFEITKVLVIAPLRVANTVWSDEIEQWSELRHLRYSKIVGTPEKRKVALQKDADIY
                     IVNRENLPWLVEQCSPYFKWDMVVIDELSSFKSWQSKRFKAFMAMRPYMKRIVGLTGT
                     PSSNGLMDLFAEFKVIDGGERLGRFIGEFRSRYFEEGRRNGNIVYEYIPMDYAECQIQ
                     DKISDITISMKALDYLDMPELISTKKLVRMSEKEKEKYIQFKKEYVLSELDGLEVTAA
                     NAASLTNKLVQLSNGAVYSDNHTVVALHEQKLDALEDILESANGETVLVAYWFKHDLA
                     RIIGRLEKLNVKSRVLKTEEDIREWNKGNVPVGLLHPAGAGHGLNLQKGGHHMVWFGL
                     TWSLELYQQTNARLWRQGQESETVVIQHIVTEGTIDEEILKALENKDAQQERLIEAVK
                     AQVGGADG"
     gene            complement(10437..10718)
                     /locus_tag="AC1PJC_001358"
     CDS             complement(10437..10718)
                     /locus_tag="AC1PJC_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001208489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VRR-NUC domain-containing protein"
                     /protein_id="HIP6620344.1"
                     /translation="MRERFVERKLVSEVKKRGGICPKWVSPSFSGVPDRLVFLPKGKF
                     GLVEVKAPDLKPRKLQVSRHKLFERLGFKVYVIDRIEMIGEVLDEIDIT"
     gene            complement(10991..13267)
                     /locus_tag="AC1PJC_001359"
     CDS             complement(10991..13267)
                     /locus_tag="AC1PJC_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017768029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed RNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage/plasmid primase, P4 family"
                     /protein_id="HIP6620345.1"
                     /translation="MQFTLSHSGQTVVQTTTVYPNQVTITGEISLQTVAQFDHVAGLF
                     LNNTRSNTNFIKSDVLVMDIDNDHSENPDEWITVERLKEIFADYNFSLVTSRSHMQAK
                     AGKAPRPKYHIYFQINEVNDKDVYVAMKEELCNQYKFFDDNAKDAARFFFGNLNAQVI
                     WHDSWLTIDEDLFQAVSIDDEEDFDADFYTPPSGPIQQGSRNSTMSVFAAKIVKRLGV
                     TQEARDGFDEQAKKCVPPLDKAELDTIWGSAVRFYNRTIKTSKGYVAPEAFNRGSLKP
                     DDYSDIGEAGVLAREFGDKLAYTNATDYLTFNGQYWKEDKQLAIGTVLEFMDLQLEEA
                     SEQYESAIKQLVQTGIPESIVREGGKGLVKLIDSPNQQILLAKYLSAKAYYQFVMKRR
                     DYRYIMATHNTAKPMLAIDISELDKNDMLLNTPDATYDLKCGLSGSQAHSATDYLTKI
                     TTASPSNQGMGLWQETLATFFCGDQELIDYVQMVVGMATIGKVYQEHMIIAYGGGANG
                     KSTFWNTIARVLGSYSGKLSADALTMSNKRNVKPEMAELKGKRLIIASEMDEGMRLNT
                     GLVKQLCSTDEIYAEKKYKDPFHFVPSHTLVLYTNHLPKVGANDDGIWRRLIVIPFNA
                     KITGKSDVKNFADHLYDNAAPAIISWIIEGAEKAIKANFKTELPKVVQESVRAYREAN
                     DWLGHFIEENCEIVKGHLQKSGDLYSAYRAYALQNGEYVRSTTDFYTALESAGYNRQR
                     TSKFNAIVGLKLLDDFLD"
     gene            13577..13711
                     /locus_tag="AC1PJC_001360"
     CDS             13577..13711
                     /locus_tag="AC1PJC_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015057839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620346.1"
                     /translation="MTQEITVNHNDELVDTLTAISVISKRLARKIKEEEINEQNERTE
                     "
     gene            13686..14009
                     /locus_tag="AC1PJC_001361"
     CDS             13686..14009
                     /locus_tag="AC1PJC_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015057750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620347.1"
                     /translation="MSKMKELNRLIHDMEETAKYYLRLVDEFKKLLSSEEETVIKPDQ
                     PKQEPQKEIQLEDIRAVLASKAKDGYKEDVRALLNAYGASSLSALDPKHFAAVLEEAG
                     GIGND"
     gene            14002..15123
                     /locus_tag="AC1PJC_001362"
     CDS             14002..15123
                     /locus_tag="AC1PJC_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000181333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2800 domain-containing protein"
                     /protein_id="HIP6620348.1"
                     /translation="MTNHAILSASASHRWLNCPPSVRLTEELPGTTSEFALEGTDAHE
                     LCAYLVENALGRNARDPTENLAFYNDEMQECAEEYRNYVIEQVEKAKGYSRDPTVLVE
                     QRLDFSKWVPEGFGTGDCIIVADGLLQVIDYKHGLGVLVDANHNPQMMCYALGALEMF
                     DGLYDFDKVTMTIFQPRKHNISTFEMEKAELLEWAENVLAPKSELAFKGEGEMQSGKH
                     CQFCKLKNVCRKRAEDNLALAKMEFANPATLDNEDIAEILPKVDLLISWANDIKAYAL
                     KEATDGHPIPGYKLVEGRSIRKFSDESAVSQAVIEAGFDPYEKKLLTITAMTKLLGKK
                     TFNDLLGGLIIKPSGKPTLVPIGDSRQEMNLAKNEFKEE"
     gene            15128..>15654
                     /locus_tag="AC1PJC_001363"
     CDS             15128..>15654
                     /locus_tag="AC1PJC_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2815 family protein"
                     /protein_id="HIP6620349.1"
                     /translation="MTTKVITGPNTRFSYLNANEPKSINGSTPKYSASLIIPKEDTTT
                     INKIKAAIEQAYKEGESKLKGNGKTVPALSTLKTPLRDGDLERPDDEAYRNAYFVNAN
                     SPQKPGVVDGNRQEIIDTSELYSGIYGRASITFYAFNSNGNKGIACGLNNLQKLRDGE
                     PLGGRTRAEDDFATE"
BASE COUNT         4382 a         3522 c         2861 g         4889 t
ORIGIN      
        1 aataacgatt ctatttctct ttttaatctt gctctagctt gattgttgtc gatataatca
       61 agtagtagct cttttttgac aatttctgga ttttcttcgg ttttgcttat cctagcaaaa
      121 ccaccaaaac caataacctc actcatcctt gtgctcctta gcataataat tgataatatt
      181 ataccacata actacctact taaaaactca atataccacg ttcatcatag acactccctt
      241 catcagtttg atgacgaata caacggtcca gacccattat gagtgctaca ataccgtcaa
      301 ttttctcgac tgacttttcc ttatctggct tgatattgcc agcggggtct tgcctcataa
      361 ctacgttttg tcccatccat ttcagtactg gatgcccacc atgttgaatc ctaccttcca
      421 tcatcagttt atagagttcc tttgaaggtg gactcatatc tttatacccc tgaccgaaag
      481 gcaccatggt caaacccatc ccttctagat tctgaaccat ctgtgtcgca ttccaacggt
      541 cataggctat ctccttgata tgataaattt ccgataagtc ttcaataaat ttttcgataa
      601 aaccatagtg aacaacatta ccctctgtag ttttgatgta gccatgacgc tcccaaacat
      661 catatagaac atggtcacgt cgacatctca gttccagtgt atcctcaggt agccaaaagt
      721 atggcaatac gatataattt tcctcttcaa atctaggagg aaataccaag acaaaagctg
      781 ttatatcgga cgtactagac aggtctagcc ctgcatagca actacgaccc ttgaggcttt
      841 catattgaat aggatcattt cccttggcat agacatgttc aggaatccaa gtaacgcttg
      901 agcttgtcca catatttaga cgaagctgtt taaagacatt ttcttctgct gggttatcaa
      961 gtgcctgttg gtaggcttct ctaacacggt caatcccaat agtatgccct agtgaagggt
     1021 tggctcttct ccagttttct tcatcattcc aatcatcttc atcggataat ccataaacca
     1081 ccggatagaa tgaagtgtcc ttttttctac cattcagaat atccaatgct ttagtatgca
     1141 attcataaca gatggagttc ctatccgttc cagctgttgt gataataaaa aagaggggtt
     1201 gttcccttgc gtctcctgac cccttggtta atacatcata caaatgacga ttaggctgag
     1261 cgtggatttc atcaaagacc aagccagata cgtttagtcc atgctttgtc ccagtctctg
     1321 ctgaaagaac ttggtaaaac ccagcgttag aataatttac aatacgcttg gtagcaccca
     1381 ttatcttaga acgcttttcc aaggggcgac tcatctgcac catctgcttg gctacatcaa
     1441 atacgattga cgcttggttt cggtcacaag ccgcaccata aacttctgca ctggcttcat
     1501 tatccgcata aagtagataa agagcgatag ccgctgctag ctcagactta ccattcttct
     1561 ttggaatttc tatataggct gttaagaact gacggttacc atcttctttc acaatcccaa
     1621 ataggtcacg gacaatctgt tcctgccacg gcaacaaatc aaatcgcttt cctgcccact
     1681 tgcctttagt gtgggagagg ttattgataa atgttactgc cctatcagcc tttgcctcat
     1741 catagtgtga ggttggaagc atgaatggac ttggttcatg atgatagctc ataaaattcc
     1801 tcctaacaaa tcttccattt catcaccagt accaacttcc gcatccatag tcgctaaacg
     1861 gttacgtgct gatggcgtta aaccaaactg ttcacagaat ttaagcatga tttttaagtt
     1921 agtctggctg atagagactt gagggacttg ttggagatag ccattcgggg ttttgataat
     1981 ggagccatgc ttggaaagga actcttctgc ctctttccag cgagcgtaag cttgacagta
     2041 tcctgcaaat gcagtcatgt ccatttcggt taaaattccc atttgttcga gaatttttcc
     2101 catccgtttc cactccttct ttgcatcatc ttcaagccac tgtgggcaac gtggggcttt
     2161 ttgtttgggt ttgacttcat tcgtaggaag tggtcgctta ccaggatttc cctcaagtat
     2221 tttcatattc gtcggctttg gttttcgccc cctgattgcc acaatctcac ctcctttaga
     2281 gtaagaaaaa agaactcaat tcgagttcat tcttaaagtt cattaaagtt atcaagtaca
     2341 gcctgacaga cagttctgtc aatatcgtcc atgttatcta tttcgttccc atatctatat
     2401 tggtagatat attcaccatc acgttttatt gtcagaattc taatccaagc accgtctata
     2461 tttctcgggt ctgtggtatc ttcacggaga aattcacaaa cgtaatgcct atcaccaacc
     2521 gttcgagtca ttatttccca catcttactt taccttttcc acgatatcta ttccatacaa
     2581 aacattcaga caactgccgt tttctcactt aactaagagt gaaccaatgt catccactcc
     2641 aataactgta ccaagtgttc ctttaggaac tagatgtgga tcatccattt ttactaatct
     2701 aacctctgta ccaaccggat agattgtctt taggttgttg aaaatttttg cgtccatgtt
     2761 attctccaaa catatcgaat gcccacttga cagcgtgacc aagatccgta acaattattg
     2821 attccttgta tattcggtta agtcggcatt caaataattc aaattcttca aggctatcaa
     2881 cgatttcgta aatctcaact actgtttctt tgtttccttt ggatgcaacg ataacccatt
     2941 ccttgtaagg aattatactt gcagttgttg ggtagatttc atagagtttt tcaagtgttg
     3001 ttgtcatggt tttgttctcc tcttcttttg ttgtgtacat attaactcta aaggagactt
     3061 atatccagtc atttatagat tattttgaag gtattttcga ctatttttca cttgctagaa
     3121 tggcacatcc aatggcatag acaactgtta ccgtcactcc atttccagct tgtttataca
     3181 gttgggcatc ggagtttact gcttgggctt tctcgaacaa atcatccgaa aatccttgta
     3241 gtcgaaaaca ttctcgaggg gttaatcgtc tgatttttac aactcgatca ttccacacca
     3301 cagcacccat ttgaccaccg catgataggt tatgggcgat tcctttccca actcttgctc
     3361 gtctagttgg agagttggga taagataaat ccaccgaatc tccaacctct gcaacttgat
     3421 aaccttgctt cgtaccattt ctgaccttga taccttcaag aacgccatgg cggtcttgag
     3481 aggtcaaggt gaacattggc tcatcctgtt ccttaagcct acgtctattt tgccgcttgt
     3541 tgattcgatt gggtgtcaga aaaggttgaa tttctagtac tccagaattc atagccgtcc
     3601 gctttgtagc tccagcagta tatcgtgcag tgatacagcg tgcctcatct gtcaactttg
     3661 gttcagtcaa agattggtca attagataaa gacctgtcct acaaccaaac ccaccaccat
     3721 taccacaaag agtacaagac acaccgctta tatcatagat acgttttcct tgtctaccac
     3781 ctacaagttg cttaagatgg ctaccgcttt ctccgctgat aggcagtact tttcgtcgac
     3841 ctctacttct aagatgtccg agagtgtaga tgcgttctcg attttgggga actccgtagt
     3901 cttttgaatt gaacacttgc cactcaaggt cgtaccctgc ttcatccagg atagtgagat
     3961 agtcgagata atctcgtccc ccgccacttg ataaaagtcc cttaacattt tcaaggagta
     4021 tccactcggg tttatcttct tcctcttggc tttggaggag gtcaacaaat gtaaaaaaga
     4081 gtccacttcg ctcaccgtat aggcctgctc gctttcctgc gatagacaca ttttgacaag
     4141 ggcttcccgc acaccagaga tctgcttttg gaagttgtgt ttggtcaatg cttgtgatgt
     4201 cgtcatgaaa ccattctcct ttcgtgtcgt acattgcttc gtaagatttt cttgcaaatt
     4261 tatccttttc acagtaaccg atacatttga aaccagctaa ttccaaacca cgacgaaaac
     4321 cacccactcc tgcaaagaaa tcaagaaagg ttagtctcat accgtctcct ccatcattga
     4381 ataggcttca tcaaaagtca aagtctgtcc atcacgcaat accgtcacgt tgtcatttcc
     4441 tgttgactct atataacgtt tgacaatgac atccacaaac ttctcatcca actcaatgcc
     4501 gtaacaaacc cttccagttt ggtctgcggc cattagggtt gagccagaac caaggaatgg
     4561 atcaagcaca atcgtcccac gcatggatga attttgaata ggataggcca tgagtggaat
     4621 tggtttcatt gtcgggtgat ctttactaga ttttggacga tcatattccc aaatggttgt
     4681 ctgtttacgg tcactgaacc actgatgttt tcccttttgt ttccaaccaa agagacatgg
     4741 ttcatgttgc cactggtagg gactacgtcc aagcactaat gagttcttct tccaaatgca
     4801 acatccactg agataaaaac cagcatcctt aaatgcctta cggaagttca atccttctgt
     4861 atccgcatga aatacataga tggaggcatc agattctata tgtttttcta cctgagtgaa
     4921 catgtcaaaa agaaactggt aaaattcact atctggcata ttatcattga gaatctttcc
     4981 agctgtttct tctacatcaa cattataagg aggatctgtc acaaccaaat ttgccttttt
     5041 atcacctaac agttggccat acgtttcggc ttttgtagag tctccacaaa tcactcgatg
     5101 cttaccaagt tgccaaatgt cccctcgttt tgaaaaggtg ggtttattta attcctcttc
     5161 tacatcaaag tcatcatctg ataggtcttt atcatggaca tttgatagga tgtcatcaat
     5221 ttctggtggt tcaaaaccag tcaggtcgag attgaaatcc gattcctgta aatccaaaag
     5281 caagtccgcc aaaagctggt catcccattg accggagatt ttgttaaggg caatgttcag
     5341 tgccttttca tcttccttgg ataaattgac aatgacacat ttggcagttt catagtctaa
     5401 gtccttcaat acagttaatc gttgatggcc accaattacc gtcaagtctt tattgacgat
     5461 gatggggtca acgtaaccaa acttgagtag gctttgctta atcttttcat actccttgtc
     5521 accctttttg agtttttttc gaggattgta agaggctggg tgtagttcag ataatcgaat
     5581 ctctctaatt tccattgttg gttgacttgt cattggtttc tcctttataa aagcgtgatt
     5641 ggatgtaaca cgaatggcta caatattttc tattttgatt ggcataagat aaaaatgacc
     5701 tgccacattg ctggcaagtc aaatcttcat atgcggtttt tgatttatcg tgttcgtcag
     5761 aatgtgttgt ccaccaaacc ttacgacact tatccgaaca gaacttcttt ggtcttccta
     5821 ttttatgaat tttaagtgtt tgataacact gaggacagcg aagtccatca ttctggtcgg
     5881 cttttgccat ttgctttgtc gccgctccat gaccaagtaa tgctggattt cgtttacagt
     5941 attttttaac agaatctcta gacagtcctg tagccttacc gattaagcca tagccaagac
     6001 cttctgctcg cattttccag atttgtttgc gttgactttc gtccatttgt tttcctttcc
     6061 agcaaaaaag gactaaaaac aactattttc tacattgttt ctagcctttt tcactatttt
     6121 attaccaaaa tgacatactt tggaacgcta catccccaca ttagaaacgt gataacggtg
     6181 ggaacgaacg taataattga gcgattttaa tgtacccgct tgcgaatttt gcgaaattgc
     6241 acgtttgagg gggcgtcggt cttagtctcc caatggttta gagatttcat cccccctccc
     6301 ccaaagggtt aaaaattgga tactattgta acgaaactcc gtgactaaaa tcgatacgta
     6361 tactccacat atcggtcagt cgtcttggtt ttcctatcat gacaagactt acaaagtgct
     6421 tgccagttac attgattcca aaagaattct tggtcacctc ggtggggtgt gatatggtca
     6481 accactgttg ctttggttaa tcgacctttg actttgcatt gaacacagag tggatgaact
     6541 tttaagtaac gaagtcgtgc tttattccac tgggcattgt atcctttggc tttggttgac
     6601 ttggcatcca gttggtagtt tgctttatgg ttctcacaat acttgtgacc ataaggtact
     6661 aggttcggac aaccatttag tttacaaggt gtgcttggtc ttcttggcat ttttcctcca
     6721 aagaaaaagc ataattattc taggtaattg tgctttacta atctatttat tgccctacaa
     6781 aacaacgtcc attctcttgg aaaattatta tcgcccgagc aattgtaggt tcttccattc
     6841 atgaaaaacg atacattcca ctgagtacca tctaaaatct ccatctcatt tgaataatat
     6901 tccttccatt cagacagttt cacacgtttt aattgattta agaagaaaaa taatcggaga
     6961 ttggagattg ttattatctc tgtttctgtc tcaggaaatt tttggatact taccaatttt
     7021 tcttctacgt taatgtcaat tgaaatcatc ggcaacatga aactaaaaag tgatacggtt
     7081 attgaggata cttgaggatt gggcatatga acactccttt tctctctcaa ttatatcact
     7141 atttctccca aggaagatag tccttcgtga aatgcccaaa gcaagttgtc ttgatgtagt
     7201 ctacattcaa gagattaagc tccttaataa tacctcgtgg tgttaaatca taacgctcac
     7261 gaatcattcc ttccagttgt tttgctgtgt agcgactggt tccaaaggtt tctacatgca
     7321 cagacacagg ttctgcaact ccaatggcgt aggctaattg tacttcacat cgtttcgcat
     7381 acccttctcg aacaatatcc tttgcaatct ttcgtgccat gtaggcaccg gatctgtcca
     7441 ccttgcttgg gtcttttcca gagaaagcac ctccgccatg atgtgcgaaa ccaccgtagg
     7501 tatccgccac aatttttcga ccagtaactc ctgcatccgc aaatgaacca ccaagtacaa
     7561 agcgactagt tggattgact agaactttga aatctagatt ctgacggtaa cgaagagcaa
     7621 gtgacatcat agcctctgtc acaattcgtt tcactttatc caagtcagcc gatgctgtat
     7681 gttggataga aaccaaaaag gtatcaatcc tatttttgtc gtagtcgtag gatacttggg
     7741 ctttggcatc ttttccaaga agagggtgtc ctagtgacat gagtttttca aggacacgag
     7801 ttgccagaac ataaggcaaa ggcagatact ctggtgtttc atctaccgca taaccaaaca
     7861 tcaacgcctg gtcacctgca cccccattgt ctacaccttg tgcaatatct ttgctttgaa
     7921 gtcctagtag gttcgtcacc atgatgtccg tcataccgta aggttcaaga acctttttga
     7981 caattccttc aaggttaaag aaatgcttgg ttgagacttc tcctgccata accacatggt
     8041 tatccttgat aagtgtttcg acagctactc gactatcttt atcgtgctta aggcattccg
     8101 tcaaaatagc atctgagatt tggtcacaga gcttgtctgg gtgtccgctt gaaacttgtt
     8161 cactggtaaa aatcatgttt tcctccacgc aaaaaaacca accgtctggc taggctttgt
     8221 gtttattttg ctgaatttct gccttcttcg taggctcgtt cgagtgcttt tttaattccc
     8281 caaactggaa tgtcgtagaa atcaaggtta tcgctccagc gttgttccaa ggtttcaact
     8341 tgtaattcct cttgagcaat ccttgtaaaa atcgcatcca gtttttcttg ttggcgtttt
     8401 gtcatggtat tgttctcctc ttcttttgtt gtgtacatat taactctaaa aaggagatat
     8461 atccagtaat tactgggtat tttttatctt ttttgacact tacaattcta ccacaaattt
     8521 tgacaaagtg aggtcaatgt taggtcacac ttagtgcagg gggaggttac tgttaggtca
     8581 agggtaggtc aagggtaggt cagggagagg ttacttttcc aaagaatatc ccattttcat
     8641 atacacttcc ctaacatggt ctaagacctt acgtcgccaa tttctaacag tacttcgact
     8701 aatatgaaac tctctcatca aactatccca attactatct gtcttaagca tagattgagc
     8761 aaaatcatac aaatctccct ttagaaattt taaagccatc tcaaaattat caaggtcatt
     8821 agccaatcgg atataccgtt gcgataaatc cgccaattgt tcctcatttt cttgaatcat
     8881 cttctcacga aaattcagtg caatcatctc tgaccgttga ttggtaggtg tacttttaac
     8941 tctaggttca tcagattttt caaaaacgag tgaaccaata acctcatttt ctgtcactgg
     9001 tttgaaatgt tccaaacgat actttaacat ctccaagtca cttttgagtt cattgtaatt
     9061 cgtcagtatg tgctctgcct tatccatctg cccctcctac ttgtgcttta acagcttcaa
     9121 tcagccgttc ttgttgtgca tctttgtttt ctagtgcctt gaggatttcc tcatcaatcg
     9181 ttccttcagt cacaatgtgt tggataacaa ctgtctcaga ctcttgcccc tgtcgccaaa
     9241 gccgtgcatt cgtttgttgg tataattcca atgaccacgt taatccaaac cagaccatgt
     9301 ggtgaccgcc tttttgaagg ttcaacccat gaccagctcc agctggatga agtaagccaa
     9361 ctgggacatt tcccttgttc cattcacgaa tatcttcttc tgttttcagc acccgactct
     9421 ttacattgag tttttctaaa cgaccaataa tccgagctaa gtcatgtttg aaccaatagg
     9481 caactaagac cgtctctcca tttgcggatt cgaggatatc ttcaagtgca tctagtttct
     9541 gttcatgtaa tgccacaacc gtatgattat cagaatatac agcaccatta gacaactgaa
     9601 ctaacttgtt cgtaagactt gcagcattgg cagcagttac ttctagtccg tctaactctg
     9661 acaatacata ctccttctta aactgaatgt atttttcttt ttccttttct gacatacgaa
     9721 ccagtttctt ggttgaaatt aattcgggca tatccagata atctagtgcc ttcatagaaa
     9781 tggtaatatc actaatcttg tcttgaattt gacactccgc ataatccatg gggatgtatt
     9841 catagacaat attgccattg cgacgaccct cttcaaagta acgactacga aactcaccaa
     9901 tgaatcgacc aagacgttcc cccccgtcaa tgactttaaa ttctgcgaac aagtccatta
     9961 gtccgtttga acttggtgtt ccagtcaacc caacaatacg tttcatgtaa ggacgcatag
    10021 ccatgaaagc tttgaaacgc ttagactgcc atgacttgaa agaactcaat tcatcaatta
    10081 ctaccatatc ccacttgaaa tacggactgc attgttccac cagccaaggt aggttttcac
    10141 gattgacgat atagatatcc gcatctttct gaagcgctac ttttcgtttc tcgggagtac
    10201 cgacaatttt cgaataccgt aagtgccgta actctgacca ttgctcaatc tcatcactcc
    10261 aaacagtatt tgcgacccga agtggggcaa taaccaaaac cttagtaatc tcaaatcggt
    10321 caaacatcaa ttcattcact gcagacaagg ttgtagctgt ttttcccatc cccatgtcta
    10381 ggatgactgc tgcatgaggg tgacctatga tgaagtcctt agcgactacc tgatagttat
    10441 gtaatgtcaa tttcatctag tacttctcca atcatctcaa tacggtcaat cacataaacc
    10501 ttgaaaccta accgctcgaa tagtttatgt cttgacactt gtaacttcct tggctttagg
    10561 tctggagcct tcacttccac caagccaaac ttacccttgg gtaaaaacac caaacgatct
    10621 ggtacaccag aaaaagatgg cgatacccat ttaggacaaa tgcctccacg ctttttcact
    10681 tcgcttacta atttccgctc tacaaatctt tctctcataa acaatccttt cgtcagaaaa
    10741 agaatggagg tctagtaaac tcgaatcagt aactttttat atagggcttt tatagtaata
    10801 attaacccat ataaaagtta tagaaaagag tatcactact tccataacta ataatagtgc
    10861 tggttgtgga actcatatat aaacctgaca catagccaat caagccctat tgtgttccat
    10921 gacctccaac atccttactt cataatccat aacatgtcag acttttctcc aaagtccaac
    10981 acgacttcca ttagtctaga aagtcatcca aaagcttcaa accaacaatg gcattaaact
    11041 tactagtcct ctgacgattg tagcctgccg attcaagtgc cgtgtaaaag tcagtagtac
    11101 ttctgacata ctcaccattc tgtagtgcat aggcacgata ggctgaatat aaatcgcctg
    11161 atttttggag atgacctttt actatctcac aattctcctc aataaaatgg cctagccaat
    11221 cgttggcttc tcgataagct ctgacagatt cttgaacaac tttcggtagt tcggttttaa
    11281 agtttgcttt gattgccttc tcagctcctt cgatgatcca ggatatgatg gctggtgccg
    11341 cattgtcata aagatggtcc gcaaagtttt tcacatctga cttgccagta atcttggcat
    11401 tgaatgggat gacaatcaat cgtcgccaaa taccatcatc gttcgctccg acttttggca
    11461 gatggttggt gtaaagaacc agcgtatggg atggaacaaa atggaaggga tccttgtact
    11521 tcttctcagc gtaaatttca tcagttgaac aaagttgctt aactagccct gtattcaaac
    11581 gcatcccttc atccatttct gatgctatga tgagtcgttt tccttttagc tcggccatct
    11641 caggcttaac atttcgtttg ttagacatgg tcaaggcatc agcggatagt ttaccagaat
    11701 agctacctag cactcgagct atagtattcc aaaaggttga ttttccgttt gccccacctc
    11761 cataagcaat aatcatgtgt tcttgataga cttttccgat ggttgccata ccgactacca
    11821 tctgaacata gtcaattagt tcttggtctc cgcagaaaaa ggtcgctaaa gtctcttgcc
    11881 aaagccccat cccttgatta cttggacttg cagtggtaat ttttgtcaga taatccgtcg
    11941 cagaatgtgc ctgactacca gataggccac acttaaggtc ataggttgca tctggagtgt
    12001 ttagtaacat atcgttttta tccagttcag aaatgtcaat tgcaagcata ggctttgctg
    12061 tattatgggt cgccataatg taacggtagt ctctacgttt catgacgaat tgataatatg
    12121 cttttgccga aagatacttg gcgagcagta tctgttgatt tggtgaatca attagtttta
    12181 ccaagccttt tccaccttca cgaacaatac tttctggaat accagtttga acgagttgtt
    12241 taatagcact ttcatactgt tcactcgctt cttcaagttg taagtccatg aactcaagga
    12301 cagttccaat tgctaactgc ttgtcttctt tccaatactg cccattaaac gtaagatagt
    12361 ccgtcgcatt tgtataggct aatttatcac caaactcacg agccaatact cctgcttctc
    12421 caatgtcaga ataatcatct ggtttcaagg agcctcgatt aaaagcctcg ggagccacgt
    12481 atcctttaga tgtttttata gttctgttgt agaatcgcac agcacttccc caaatggtat
    12541 ctaactctgc tttatcaagt ggcggtacac atttcttagc ctgctcatca aagccatccc
    12601 ttgcttcttg cgttacacct aaacgtttga caatcttagc tgcaaataca gacatcgttg
    12661 aattacgact cccttgctgg attggtccac ttggaggagt atagaagtct gcatcgaaat
    12721 cttcctcgtc atcaatagac acagcttgaa acaaatcttc atcaatagtt agccaagaat
    12781 catgccatat aacctgtgca ttgagatttc caaagaagaa acgtgccgca tccttggcat
    12841 tatcatcaaa aaacttgtat tgattacaaa gttcttcctt catagctacg tagacatctt
    12901 tatcatttac ttcattgatt tggaagtaaa tatgatattt tggtcttgga gcttttcctg
    12961 cctttgcctg catatgactt cgactagtta ccaaggaaaa gttataatcc gcaaagattt
    13021 cttttaatcg ctctacagtt atccactcat ctggattttc agaatgatca ttatcaatat
    13081 ccatgaccaa gacatccgac ttgatgaaat tggtatttga gcgtgtattg tttaaaaaca
    13141 gccccgccac atggtcgaat tgcgcaacag tttgtagcga tatttcacca gtaatagtta
    13201 cttgattggg atagaccgta gttgtctgaa ccacagtctg tccagaatga gataaggtaa
    13261 attgcattat gcaccctcca aatgtaatta atgatgtgtg gagatttttc cctcctacct
    13321 tattaggtag aactatggct catttttccg ccccttaata aaactttttt caaaaaaaat
    13381 aatcttcctt tatatagcca gagggagatt atttttatgt ataacaaatt aaaagaatat
    13441 ttataaaaaa gcggaaaatt acatcccagt attacctata taggtgtaag ggatgaaaaa
    13501 catcgattca aaaaattttt aataaaaacc ggaatttctg ttcacatctc tacctaataa
    13561 gataggaggt cacaaaatga ctcaagaaat aactgtgaat cacaatgatg aactggtcga
    13621 tacactcacc gccatcagcg tcatctcaaa gcgactcgct cgtaaaataa aggaggaaga
    13681 aatcaatgag caaaatgaaa gaactgaata gactgattca tgatatggaa gaaaccgcaa
    13741 agtactacct tcgattggta gatgaattca agaaactcct ctcatctgag gaagaaacgg
    13801 taataaaacc tgatcaacct aaacaagaac cacaaaagga aattcaattg gaggatatcc
    13861 gtgctgtact tgcctcgaaa gcaaaagatg gctataagga agatgtccgt gctcttctaa
    13921 acgcttacgg tgcttcttct ctatcagcac ttgatccaaa acactttgcg gcagtacttg
    13981 aagaagctgg agggattggt aatgactaac cacgccattc tatccgcatc tgcatcacat
    14041 cgttggttga actgcccacc atctgttcgc cttacagagg aactaccagg aacaacatct
    14101 gagtttgctc ttgaaggtac tgatgctcac gagttgtgtg cttatctagt cgagaatgct
    14161 ttagggagga atgcgcgtga tccaactgag aatttagcat tttataacga tgagatgcag
    14221 gaatgtgcag aagaatatcg caactatgtc atcgagcaag ttgagaaagc caaaggctac
    14281 tctcgtgacc ctacagttct tgtcgaacaa cgacttgact tttcaaaatg ggtgcctgag
    14341 ggctttggga ctggggattg catcattgtg gcagacggac ttctacaggt tattgattat
    14401 aagcacggac ttggtgttct agttgatgca aaccacaacc cgcaaatgat gtgttatgca
    14461 cttggagcac ttgagatgtt tgatggactt tatgattttg ataaagttac catgaccatc
    14521 tttcaaccac gaaaacataa catttctacc tttgagatgg aaaaagctga gttgcttgaa
    14581 tgggctgaaa acgtactcgc tccaaaatct gaacttgcat tcaaaggtga gggggagatg
    14641 caatctggta aacactgcca attctgtaag ctcaagaatg tctgtcgcaa acgtgctgag
    14701 gataatttgg cactagccaa gatggagttt gctaatccag ccacccttga taacgaggat
    14761 atcgctgaga tattacctaa agtagacctg ttgatttcat gggcaaacga cattaaagcc
    14821 tacgctttga aagaagctac agatggacat cctatcccag gatacaaact ggttgaaggt
    14881 cgctctattc gtaaattctc agatgaatca gccgtgagtc aagctgtgat tgaagctggc
    14941 tttgaccctt acgagaagaa actgctcact atcactgcca tgaccaaact ccttggtaag
    15001 aaaaccttta atgacctgct tggtggtctt atcataaaac caagtggaaa accaacactc
    15061 gttcctattg gcgatagccg tcaagagatg aaccttgcaa aaaatgaatt taaagaggaa
    15121 taactatatg acaactaaag taataacagg accaaacact cgcttcagct acttaaatgc
    15181 caacgagcca aaatctatta atggtagcac tcccaagtac agtgcctcac tcatcattcc
    15241 aaaagaggat actaccacca ttaacaagat caaagcagcc attgagcaag catataaaga
    15301 aggtgagtca aaactcaaag gcaatggcaa aacagtacct gcattatcta ctctgaaaac
    15361 tccacttcgt gatggtgacc ttgaacgacc tgatgatgaa gcttatcgca atgcctattt
    15421 cgttaatgcc aactcacctc aaaaacctgg ggtggttgat ggcaatcgtc aagaaatcat
    15481 tgatacttca gaattgtact ctggtatcta cggacgcgct tctattacct tctatgcttt
    15541 caattcaaat ggtaataaag ggattgcttg cggtttaaat aacttgcaaa aattgcgtga
    15601 tggcgagccc ctcggtggac gcactcgtgc tgaagatgat tttgcgacag aaga
//
LOCUS       DBNFCX010000048        15619 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.048, whole genome shotgun sequence.
ACCESSION   DBNFCX010000048 DBNFCX010000000
VERSION     DBNFCX010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 15619)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15619)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15619
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.048"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..273)
                     /locus_tag="AC1PJC_001364"
     CDS             complement(<1..273)
                     /locus_tag="AC1PJC_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000448304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactococcin 972 family bacteriocin"
                     /protein_id="HIP6620350.1"
                     /translation="MKKSFALLGAILTMFTVIPTVAAWTQYPDGGVWAYGYRSGEAYS
                     NYYHGKKYHYSSVISRKDADSSRGEAEATKTSYATIKIVKDEKAAFY"
     gene            complement(316..441)
                     /locus_tag="AC1PJC_001365"
     CDS             complement(316..441)
                     /locus_tag="AC1PJC_001365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620351.1"
                     /translation="MKKKVAYVTIAILLLLISVIRIFGLPEENPLETQPATHLVG"
     gene            633..1493
                     /locus_tag="AC1PJC_001366"
     CDS             633..1493
                     /locus_tag="AC1PJC_001366"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIP6620352.1"
                     /translation="MRWDYGSVYKSIRKSKHLSQEQICGDYLNRTTLVRFEKNQTIPS
                     YELMRFLLKQVDMTFEEFEYLCNYYQPSQRQQLLYDIDNLRNPTTKTMEDLIKRCQDH
                     LKKEPNDIPIHRKCLLLETVVAVRKSSSITQLSDEAETLSKLLWSELERYDNWYHNDI
                     ILVGTLLSKISSLDSLEETANLLLKRLEKYKDYKRIQPTILSYYQSLSYFFLEQRQYN
                     KSTFFATKLMDLAKQEKRYDQLARAYVYLGIAQNKQELVEKGLQILELTDEKRLVDNL
                     KKLIKQHQTD"
     gene            complement(1662..2447)
                     /locus_tag="AC1PJC_001367"
     CDS             complement(1662..2447)
                     /locus_tag="AC1PJC_001367"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002276310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HIP6620353.1"
                     /translation="MTKQIHWDGALSQEGFDIIKGEGGVIVCPTKVGYIIMTADKAGL
                     ERKFDAKERKRNKPGVVLCGSMEELRELAQLTPEIDAFYQKHWDEDILLGCILPWKPE
                     AYAKLQAYGDGREELMTDVRGTSCFVIKFGVAGEQIAKEMWEKEGRMVYASSANPSGK
                     GNRGKVEGIGERIASKVDLIIEADDYVASIQPDKTIETRYEQGVMVSMVDKDGKLIPE
                     QGADSRSISPCPVVIRKGLDIDKIMMHLSDHFNSWDYRQGEYY"
     gene            complement(2613..3206)
                     /gene="leuD"
                     /locus_tag="AC1PJC_001368"
     CDS             complement(2613..3206)
                     /gene="leuD"
                     /locus_tag="AC1PJC_001368"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019768698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HIP6620354.1"
                     /translation="MHQFTTWTGTTVPLMNDNIDTDQLLPKQFLKLIDKKGFGKYLLY
                     AWRYLDDNYTDNPDFILNQPEYQGASILISGDNFGAGSSREHAAWALADYGFKVIIAG
                     SFGDIHYNNDLNNGILPIIQPKEVRDQLAQLGPDQEITVDLADQLIRTPFGEFPFDIE
                     QDWKHKLFNGLDDIGITLQYQDLIEEYEDNRPSYWQN"
     gene            complement(3206..4597)
                     /gene="leuC"
                     /locus_tag="AC1PJC_001369"
     CDS             complement(3206..4597)
                     /gene="leuC"
                     /locus_tag="AC1PJC_001369"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HIP6620355.1"
                     /translation="MSGKSIFDKLWDRHVIIGKEGQPQLLYVDQHYIHEVTSPQAFQG
                     LRDTGRSVRRPDLTFATFDHNVPTVDIHNIRDVISKAQMDALAKNIEDFGIPHAAHGS
                     EHQGIVHMVGPETGRTQPGKFIVCGDSHTATHGAFGAIAFGIGTSEVEHVLATQTIWQ
                     VKPKRLLVEFVGQAQRGVYAKDFILALIARYGVDCGLGHVVEFAGPVIDRLSMEERMT
                     ICNMSIEFGSKMGIMAPDQTTFDYLRGRECAPADFDAAVADWKELYSDADTVYDKHLV
                     LDVSDLAPMVTWGTTPAMGVSFDETFPAIRDHNDERAYAYMDLAPGQKAADIPVGYVF
                     LGSCTNARLSDLQLAARIVKGRKIAEQVTAIVVPGSRPVKRAAEKLGLDKIFMEAGFE
                     WRDPGCSMCLGMNPDKVPAGVHCASTSNRNFEDRQGFGAKTHLCSPAMAAAAALYGRF
                     VDTRQLDIFKEGV"
     gene            complement(4600..5646)
                     /gene="leuB"
                     /locus_tag="AC1PJC_001370"
     CDS             complement(4600..5646)
                     /gene="leuB"
                     /locus_tag="AC1PJC_001370"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003862 - 3-isopropylmalate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HIP6620356.1"
                     /translation="MTKKIVALAGDGIGPEIMEAGLAVLEAVAGQVGFDYEIEERAFG
                     GAGIDAAGHPLPDATLQACRQADAILLAAIGSPQYDDAVIRPEQGLLQLRKELGLFAN
                     IRPVKIFDSLKDYSPLKADRLDGVDLVMVRELTGGIYFGEHILETDQASDSNTYQVEE
                     IERVVRSAFDLAQKRRKKVTSIDKQNVLATSKLWRKVADEVAKDYPDVTLEHQLVDSA
                     AMLLITNPSRFDVLVTENLFGDILSDEASVLTGTLGVLPSASHAVAGPSLYEPIHGSA
                     PDIAGQGIANPVSMILSVAMMLEESFDLVQAGQTIRQAVEAVFSQGIFTKDLGGTATT
                     KEMTEAIIAQIGGG"
     gene            complement(5655..7217)
                     /locus_tag="AC1PJC_001371"
     CDS             complement(5655..7217)
                     /locus_tag="AC1PJC_001371"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HIP6620357.1"
                     /translation="MRVIEFLDTTLRDGEQTPGVNFSIKEKVTIAKQLEKWGISAIEA
                     GFPAASPDSFEAVRQIAAAMTKTAVTGLARSVKSDIDACYEALKDAKYPQIHVFIATS
                     PIHREFKLQKTKEEILAQITEHVSYARERFEVVEFSPEDATRTELDYLLEVVQTAVDA
                     GATYINIPDTVGFTTPQHYGEIFRYLTTNVKSDREIIFSPHCHNDLGMAVANTLSAIK
                     NGAGRVEGTINGIGERAGNAALEEVAVALEIRKDFYDVTSPIVLKETLNTSELVSRFS
                     GIAIPRNKAVVGGNAFSHESGIHQDGVLKNPLTYEIITPELVGVKKNSLPLGKLSGRH
                     AFVEKLKELDLYFEEGDVASLFARFKNLADKKEKITDADIRALVAGTEISNRDGFQFK
                     DLRLDSQSDGSIQAQVIFINQNEEEVVVVESGKGSVEAVFNAIDQFFHQEISLERYHI
                     DAITDGIDAQARVLVAVENKATETIFNASGIDFDVVKASAIAYIHANVMVQKENSGQI
                     DKKLSEKDMPHI"
     gene            complement(7949..8182)
                     /locus_tag="AC1PJC_001372"
     CDS             complement(7949..8182)
                     /locus_tag="AC1PJC_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HIP6620358.1"
                     /translation="MLTSIIAGAIIGLIAGALTSSDDRRGCLGNIILGLAGSWIGQLL
                     FGDWGPQFAGMALVPSVFGAVLLVAIFSSSRRN"
     gene            complement(8242..9483)
                     /locus_tag="AC1PJC_001373"
     CDS             complement(8242..9483)
                     /locus_tag="AC1PJC_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HIP6620359.1"
                     /translation="MVLPNFKENLAKYAKLLVSTGINVQPGHTVQLTIGVEQAELARL
                     IVKEAYAHGAKEVLVNWLDDVIARERLVNVDVELLEQVHPQRITEMNYLLERKASRLV
                     VLSEDPGAYDGVDPEKLSRNARALSQALNPMRQASQANKISWTLGAASGLEWAKKVFP
                     NAASDEEAVDLLWDQIFKTCRIYEEDPIKAWEEHEARLVAKAKVLNDEQFVKLHYTAP
                     GTDLVLGMPKNHLWEAAGSVNAQGEHFIANMPTEEVFTAPDYRVADGYVTSTKPLSYN
                     GNIIEGIKVTFKDGEIVDVTAEKGDEVMKKLVFDNAGARGLGEVALVPDKSPISQSGV
                     TFFNTLFDENASNHLAIGQAYAFSIEGGTEMSQEELKEAGLNRSDVHVDFMIGSNKMN
                     IDGIREDGTRVPIFRDGEWAI"
     gene            complement(10111..10713)
                     /locus_tag="AC1PJC_001374"
     CDS             complement(10111..10713)
                     /locus_tag="AC1PJC_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012997947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HIP6620360.1"
                     /translation="MSNFAKLQETRRSIYALGKDLPVSNEEVVALVEKAMKESPSAFN
                     SQSSRAVVLFGAESEAFWNEIAYSELEKVTPAEAFEGTKGRLASFAAGAGTILFFEDQ
                     DVVKGLQESFPLYAENFPIWSEQAHGINLYAVWLAFAEKNIGMNVQHYNPLVDAQVAE
                     KYGIPANWKLRAQAPFGSIAAPAADKDYMADGDRVKVFGN"
     gene            complement(10858..15249)
                     /locus_tag="AC1PJC_001375"
     CDS             complement(10858..15249)
                     /locus_tag="AC1PJC_001375"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002907973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PolC-type DNA polymerase III"
                     /protein_id="HIP6620361.1"
                     /translation="MSDKFQLLLQQIGMPLDARQSGAFSTATIEKVVLHRVSKLWEFT
                     FRFETPLPLMDYQLFKARLATEFEKVGNKIQFSIVSDAEAFEAGLVEAYYPEAFTEDL
                     CQSAGFKALFQPLEVAYRDGVLWIKGPETIDTDHFRKNHLPNLVEQYKRFGFGNLAVD
                     IQVCQEMTQQQAEIFHAQNEEIYQQANEENLAALEQLAQMAPPPEAAQPFVPEYKKNR
                     PAKVNIEKAEITPMIEVDSEENRIVFEGLVFEVEQKTTKTGRVIINFKMTDYTSSFTL
                     QKWAKNEEEAQKFDMVKKGNWLRVRGNVETNNFTRDLTMNVQEVQEVKKEIRKDLMPE
                     GEKRVEFHAHTNMSTMDALPAVEDLVARAAAWGHKAVAITDHGNVQSFPHGYHAARKA
                     GIKPLFGMEANIVEDSVPIAYNEADVVLSDATYVVFDVETTGLSAVNNALIQIAASKM
                     HKGNIIAEFDEFIDPGHPLSQFTTDLTGITDEHVRGSKPLEQVLREFQDFCQDSVMVA
                     HNATFDVGFMNVNYERAGLPIISQPVIDTLEFARNLYPDFKRHGLGPLTKRFGVALEH
                     HHMANYDAEATGRLLFIFLKDALEKHNLTNLNQLNTELIAEDSYKKARVKHATLYVIN
                     QVGLKNMFKLVSLSNTKYFEGVPRIPRTVLNAHREGLILGTACQEGEVFDDLLSKGID
                     EAVKTAAYYDFIEVMPPALYAPMIAKEQFKDMAEIEETIKQLIEVGRRAGLPVLATGN
                     VHYIDPEEEIYREIIVRALGQGAPINWTIGNGENAQPAPLPKAHFRTTSEMLDEFAFL
                     GESLAREIVITNPNAMLDRFEDVQVVKTDLYTPYIEKAEETVAELTYQKAFEIYGNPL
                     PDIIDLRIEKELTSILGNGFAVIYLASQMLVHRSNERGYLVGSRGSVGSSFVATMIGI
                     TEVNPMPPHYVCPNCQHSEFITDGSYGSGFDLPDKDCEKCGTKYKKDGQDIPFETFLG
                     FDGDKVPDIDLNFSGDDQPSAHLDVRDIFGEENAFRAGTVGTVAAKTAYGFVRGYERD
                     YGKFYRDVEVERLAAGAAGVKRTTGQHPGGIIVFPDYMDVYDFTPVQYPADDVTANWQ
                     TTHFNFHDIDENVLKLDVLGHDDPTMVRKLQDLSGIDPQTIPADDKGVMALFSGTEIL
                     GVTPEQIGTPTGMLGIPEFGTNFVRGMVEETKPTTFAELLQLSGLSHGTDVWLGNAQD
                     LIKAGIADLSTVIGCRDDIMVYLMHAGLPPKMAFNIMERVRKGLWLKISEEERNGYIQ
                     AMKDNKVPDWYIESCGKIKYMFPKAHAAAYVMMALRVAYFKVHYPIYYYCAYFSIRAK
                     AFDLATMSGGLERVKAKMEEIALKKKNNEASNVEQDLYTTLELVNEMLERGFKFGKLD
                     LYKSHATDFLIEDDTLIPPFVAMDGLGENVAKQVVAARAEGEFLSKTELRKRGGLSGT
                     LVEKMDEMGILGKMPEDNQLSLFDDLF"
     gene            complement(15498..15608)
                     /locus_tag="AC1PJC_001376"
     CDS             complement(15498..15608)
                     /locus_tag="AC1PJC_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002305197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative holin-like toxin"
                     /protein_id="HIP6620362.1"
                     /translation="MLLTAFEVVQTILAFGSFTIALVSLCYKIFKENDKK"
BASE COUNT         4239 a         3900 c         3249 g         4231 t
ORIGIN      
        1 gtagaaagct gctttctcat cctttacgat tttaatagtt gcataggatg ttttagtagc
       61 ttccgcttca cctcttgaag aatcagcatc tttacgacta attacagagg aataatgata
      121 tttttttcca tggtagtagt ttgaatatgc ctctccactt ctataaccat aagcccaaac
      181 gcctccatca ggatattgtg tccaagccgc tactgttgga atcactgtaa acattgttaa
      241 aatagcaccg agtaaagcga atgatttttt cataatattt tccttctttc tatttctact
      301 aaccaaaagt acatcctacc ccaccagatg agttgccggt tgggtttcta atggattttc
      361 ttctggcaga ccaaaaatac gaatgaccga gataagtaag agcaatatag caattgtcac
      421 atatgcaacc ttctttttca tccttccctt tcctcctctc tgatgggatt tttcttgaat
      481 acctcaactc ctaccaagaa tatcgtttcc gctcttcttt ttcctttcta cttgatagaa
      541 atctctgtat attttctacc aatatgatat actattttta taaagttaat tcgttttgtt
      601 gcaaataatc acattttttc aaggagtaga ttatgcggtg ggattatggc agtgtgtata
      661 agagcattcg gaaaagcaag catttgagtc aggagcagat ttgtggggat tatctcaatc
      721 ggacgacctt ggttcgcttc gagaaaaatc aaaccattcc tagctatgag ctcatgcggt
      781 tcttgctcaa gcaagttgat atgaccttcg aggagtttga atacctctgt aactactacc
      841 agcccagcca acgccaacaa ctgctctatg atatagataa tctcagaaat ccgaccacga
      901 agaccatgga ggatttgata aagcgttgcc aggaccattt gaaaaaagaa cccaatgata
      961 ttcctattca cagaaagtgc ctcctcctgg agaccgttgt agctgtccga aaaagttctt
     1021 ctatcaccca gctttccgac gaagctgaaa ccctgtccaa actcctctgg tcagaattgg
     1081 aacgatatga taactggtac cataacgata ttatcttagt aggtactctt ctgtccaaga
     1141 tttcttcact tgatagcctt gaagaaactg ccaatcttct tctaaaacga ttggaaaaat
     1201 acaaggatta caagcgaatc cagcccacca tactgtcata ctatcagtct ctttcttatt
     1261 ttttcttgga acaaagacag tacaacaagt ctactttttt tgccaccaaa ctcatggacc
     1321 tagccaagca agaaaaacgc tatgaccaac tagcccgtgc ctatgtctat ctaggcatag
     1381 cccaaaacaa gcaagaactg gtggaaaaag gattacaaat cttggaactg acagacgaga
     1441 aaaggctagt cgacaacctc aaaaaactta tcaaacagca ccaaactgac tgaatttcgg
     1501 tcagtttttt atgtacgaaa aaacgaccct ttcggatcgt tcctatttat agtttatagt
     1561 cttcagtttg cttttagtac taggcaacga gctgcagaca gtactggagt acggcaaagc
     1621 gagttaacga agtaataaaa gataaactga atgactatat cttaatagta ttctccttgt
     1681 ctatagtccc aagagttgaa atgatcagac aagtgcatca tgattttatc gatgtccaga
     1741 cccttacgga tgacaactgg gcatgggctg atagaacggc tatctgcacc ttgttctgga
     1801 atcagtttac catctttgtc taccatagac accataaccc cttgctcata gcgggtttca
     1861 atggtcttat ctggctggat agatgccaca tagtcatccg cctcgatgat taaatcgacc
     1921 ttagaagcaa tccgctcacc gataccttct accttgccac ggtttccctt acctgacggg
     1981 ttggcagaag aagcatagac catacgacct tctttttccc acatttcctt ggcaatctgc
     2041 tcgcccgcca cgccaaactt gataacaaag caggaagtcc cacgcacatc ggtcatcaac
     2101 tcctcacgac catcgccata ggcttgcaac ttagcataag cctctggttt ccaaggcagg
     2161 atacaaccca acaaaatgtc ctcatcccaa tgtttttggt agaaggcatc aatctcaggc
     2221 gtcagctgcg ccaactcacg aagctcctcc atgctaccac aaaggaccac gcccggctta
     2281 ttacgcttgc gctctttggc atcaaactta cgctccaagc cagccttgtc agcagtcatg
     2341 atgatgtaac caaccttcgt cggacagaca atcacgcctc cctcaccctt gataatgtca
     2401 aaaccttctt gtgaaagtgc gccatcccag tgaatttgtt tcgtcataat aatttcctct
     2461 tttcttttgt tccatagcag agcgacctgc ttgttttctc atatttcgta ggagtctttc
     2521 agtttgcttt tagtactagg caacgagctg cagacagtac taaagtacgg caaagcgagt
     2581 taacgcagta ataaaagata aaatggaaga ctctagtttt gccagtagct tgggcgatta
     2641 tcctcatact cctcaatcaa atcctgatac tgtaaggtaa taccgatatc gtctaagcca
     2701 ttgaacaact tgtgtttcca gtcctgttcg atgtcaaatg ggaattcccc aaaaggcgtc
     2761 cgtatcaact gatctgccaa gtcaaccgtg atttcttggt caggacccag ctgagctagt
     2821 tggtccctga cttctttggg ctggataatg ggcagaatcc cattgttcaa gtcattgttg
     2881 taatgaatat ctccaaagga gcctgcaatg ataaccttga aaccgtagtc agccagagcc
     2941 caagcagcgt gttccctaga agaacctgct ccgaagttat ccccagatat gaggatacta
     3001 gcgccttgat actcaggctg attgagaatg aaatcaggat tgtccgtgta gttatcatcc
     3061 aagtaccgcc aagcatagag cagatacttg ccaaagccct ttttgtcaat cagcttgaga
     3121 aactgcttgg gcaggagctg gtcggtatca atattatcat tcatgagtgg aacggttgtc
     3181 ccagtccatg tggtaaattg gtgcattaga ctccctcctt gaaaatgtct agctgtctag
     3241 tgtcaacaaa tcgtccataa agcgcagctg cggcagccat agcaggacta cacaagtggg
     3301 tcttggcccc aaagccctgt cggtcttcaa agtttcgatt acttgtggag gcgcagtgga
     3361 cacccgcagg gaccttgtct ggattcatgc ccagacacat ggagcaacca ggatcccgcc
     3421 actcaaaacc agcctccatg aaaatcttgt ctagacctaa cttttctgca gcacgcttga
     3481 cagggcgact gcctggtacg acaatagccg taacctgctc tgctattttc cgccccttaa
     3541 caatcctagc tgccagctgc aaatcgctga ggcgagcatt ggtacaggag cctaggaaga
     3601 catagccaac gggaatgtcc gcagcctttt gcccaggagc caagtccatg taagcatagg
     3661 cccgctcgtc gttgtggtca cggatggctg ggaaggtttc gtcaaagcta acccccatag
     3721 caggcgtcgt tccccaagtg accatgggtg ccaagtctga cacatcaagg actaggtgct
     3781 tgtcatagac cgtgtccgca tccgagtaga gctccttcca gtctgccacc gccgcatcga
     3841 agtccgctgg tgcacactcc cgaccacgca ggtagtcaaa ggtggtctgg tctggagcca
     3901 tgatgcccat tttggagccg aattcaatgg acatattgca aatggtcatc cgctcttcca
     3961 tactgagtcg gtcgatgact ggaccagcaa actccaccac atgacccagc ccacaatcca
     4021 caccatagcg ggcaatcaga gccagaatga agtccttggc atagacgcct ctttgcgcct
     4081 gaccgacaaa ctctactaag agtcgcttag gtttgacctg ccaaatggtc tgagtagcga
     4141 gaacgtgctc cacttcagaa gtaccaatcc caaaggcaat agctccaaat gctccgtgag
     4201 tcgctgtatg gctatctccg cagacaatga acttacctgg ctgggtcctg cctgtttctg
     4261 gtccaaccat gtggacaatc ccctgatgtt ccgaaccgtg ggctgcgtgg ggaatgccga
     4321 aatcttctat attcttagcc aaggcatcca tctgagcctt ggaaatgaca tcacggatat
     4381 tgtgaatatc aacggttggc acgttgtggt caaaagtcgc aaaggtcaag tctgggcgcc
     4441 gaacagatcg ccctgtatcc ctcaatcctt gaaaggcctg gggactagtc acctcatgga
     4501 tatagtgctg gtccacataa aggagctgag gctgaccttc cttccctata atcacatggc
     4561 ggtcccaaag cttgtcaaaa atagatttgc cactcatatc tacccacctc caatctgggc
     4621 aataatggcc tctgtcattt ctttggtagt ggcagtgcca cctagatctt tagtgaaaat
     4681 cccctgtgaa aagaccgctt caactgcctg gcgaatggtc tgacctgctt ggaccaaatc
     4741 aaaactttct tccagcatca tggcaacaga tagaatcatg ctgacaggat tggcaatgcc
     4801 ctgaccggca atatccggtg ccgaaccatg gataggttcg tagagactgg gacctgccac
     4861 cgcatgacta gcagaaggca gaacccccag cgttcctgtt aatacgctgg cttcatccga
     4921 caaaatatct ccgaaaagat tttccgtcac caagacgtca aatcgactag gattggtaat
     4981 caaaagcatg gctgcgctat ccaccaactg gtgctccaag gtcacatctg ggtagtcctt
     5041 agccacctca tccgctacct tacgccataa ttttgacgtc gccagtacat tttgtttatc
     5101 aatgctggtg actttttttc gtcttttttg ggctaggtca aaggcagagc ggacaacccg
     5161 ttcaatctct tctacctgat aggtattgct atcgctggct tggtctgtct ccagaatgtg
     5221 ctctccaaaa taaatcccac ctgtcaactc ccgtaccatg accaaatcca caccgtccag
     5281 ccggtcggcc ttcagaggag aatagtcttt caggctatca aaaattttca ccggacggat
     5341 attggcaaag agacccagtt ccttccgaag ttgaagcaga ccttgttctg gtcgaataac
     5401 tgcatcatca tattgaggac taccgatagc tgccaataaa atcgcatccg cctgacggca
     5461 ggcttgcaag gtagcatctg gtagaggatg gccagccgca tcaatcccag cgccaccaaa
     5521 agctctctcc tcaatctcat aatcaaatcc tacttgccca gccacagcct cgagaactgc
     5581 taggccagcc tccatgattt caggaccgat tccatcacca gccaaggcta caattttttt
     5641 cgtcatactt cctcctagat gtgtggcatg tccttctcag atagtttctt atctatctgt
     5701 ccactatttt ctttttgcac catgacatta gcatggatat aggcaatggc agaagccttc
     5761 accacgtcaa agtcaatacc agaggcatta aagattgttt ccgttgcctt gttttctaca
     5821 gcaactagca cacgagcctg ggcatcgata ccgtcggtaa tagcgtcaat atggtagcgt
     5881 tccaaactaa tctcttggtg gaagaattgg tcaatagcat taaagacagc ctcaaccgag
     5941 cccttgcctg actccacaac gaccacttct tcctcattct gattgatgaa gatgacctga
     6001 gcctgaatac ttccgtcaga ctgactatcc aaacgcaaat ctttaaattg gaaaccatcg
     6061 cgattgctga tttctgtccc agctactaga gctcgaatat ccgcatccgt aattttttcc
     6121 ttcttgtctg ctaggttttt gaaacgagca aacaagctag caacgtctcc ttcttcaaaa
     6181 tacaagtcta attctttcag cttttctaca aaggcatggc gtccagatag tttacccagg
     6241 ggcagagaat ttttcttgac ccctaccaac tcaggtgtaa tgatttcata ggtcaatgga
     6301 tttttcaaga caccatcttg gtgaattcct gactcgtgag agaaggcatt gccaccaaca
     6361 accgccttat tgcgtggaat ggcaattcca gagaagcgag agaccaattc tgaagtgttg
     6421 agggtttcct ttagaacaat cggactagtc acatcataga aatctttccg aatttcaagg
     6481 gcaacagcta cttcttcaag ggccgcattt cctgctcgct caccgatacc gttgatagtt
     6541 ccctcgacac gaccggcacc gtttttaatg gccgataggg tattggcaac agccattcct
     6601 aggtcattgt ggcaatgtgg actgaaaata atctcacggt ccgatttgac gtttgttgtc
     6661 aagtaacgga aaatttctcc gtagtgctga ggagtcgtaa agccgactgt atctggaatg
     6721 ttgatgtagg tcgcaccagc atctaccgct gtctgtacca cttcaagcaa gtaatccaac
     6781 tcagtccgcg tcgcatcctc tggcgagaat tccaccacct caaaacgctc acgtgcatag
     6841 ctgacatgtt cagtgatttg cgccaaaatt tcttctttgg tcttttgcag tttaaattca
     6901 cggtggatgg gactggtagc aatgaaaaca tgaatctgcg gatacttggc atctttcaga
     6961 gcctcataac aagcatcaat gtccgactta acagaccgtg ccaaacctgt cacagccgtc
     7021 ttggtcatcg ctgccgcaat ctgacgaacc gcttcaaacg aatcaggact ggccgctggg
     7081 aaacccgctt caatggcaga aatcccccat ttctccaact gcttggcaat ggtcactttt
     7141 tccttgatag aaaaattcac acctggcgtc tgttcaccat ctcgtaaagt cgtatctaaa
     7201 aattcaatca cacgcataag aatacctttc taaacaatac aaacttcaat actatcgtcc
     7261 ttgagtttac ttttagtact agctccaaca gtcagagtag tgactgttgg aggtgggaaa
     7321 tagagcgaac ttagttcgca tcaaaaaccg caggcataac tggagttagg caaggcgagt
     7381 tcaaataatg acgaaattat ttgaagttgg aaataaggaa acgaagtttc ctcattcgtc
     7441 gaagtaataa aagtaaacta aatgacgata aaaaagaaaa cacctcgagg gctattacct
     7501 gcgagatgtt gtcaacagcg cccgcttggt aagccaaaca ggactaatgc attctttcag
     7561 cactagcccg accgtcgcaa caacaaagca aagaattttg tagtgacagg tttcatttga
     7621 ctttttcctt tcagtattct ggaaccggta ttcacagttc agcacttcca tctaaggcta
     7681 gtatttcagc tactcatcgt tagttttttt caaaatacgt cagtattccc tcaaaaaact
     7741 gccttgatta gcgaaaaact atctcttata tacaagcact tcacttgtga atacaggttc
     7801 ttaattgttt acaatgatac cttacttttt ttcacttgtc aacagaaaaa tggaaatttt
     7861 ctgaaaaatc cgaacaatac ggcaattcac gcaaattcct ccacaaataa aaccaaacct
     7921 catccgaagt ttggttttac agttcattct aattccgtct ggaactgcta aaaattgcca
     7981 ccagcaatac tgctccaaag actgacggta ccagggccat accagcaaac tgtggtcccc
     8041 aatcaccgaa gagcaactgt ccaatccacg aaccagcaag cccaagaata atattcccca
     8101 gacaaccacg acggtcatct gacgaagtaa gagcgcctgc aatcaagcca ataatggcac
     8161 ctgcgataat acttgttaac atcttgtttt cctcctattc ttacaaaata agactggttg
     8221 cccagtctta tacacatatc attaaatcgc ccactcaccg tcacggaaga ttggcacacg
     8281 agtaccgtct tcacggatac cgtcaatgtt catcttgtta gaaccaatca tgaagtccac
     8341 gtgaacatct gagcggttga gaccagcttc tttcaactct tcttggctca tttccgtgcc
     8401 accttcgata gagaaggcat aagcttgacc aatcgccaag tggtttgagg cattttcatc
     8461 aaagagggtg ttgaagaaag tcacacctga ttgagagatt gggctcttgt ctggaacaag
     8521 ggcaacttca ccgagaccgc gagcaccagc attatcaaag accaatttct tcataacttc
     8581 atcgcctttt tcagccgtca cgtccacgat ttcaccgtct ttgaaggtta ctttgatgcc
     8641 ttcgatgatg ttaccgttgt agctgagtgg ttttgtagac gttacataac cgtctgccac
     8701 acggtagtca ggtgctgtga agacctcttc tgttggcatg ttggcaataa agtgttcacc
     8761 ttgggcatta accgaaccag ccgcttccca caagtgattc ttcggcatac cgagaacgag
     8821 gtcagttcct ggtgctgtgt agtgcaattt gacaaactgc tcgtcgttaa gcaccttagc
     8881 cttagccacc aagcgtgctt cgtgctcttc ccaagccttg attggatctt cctcgtagat
     8941 acggcaagtc ttgaagattt ggtcccaaag gaggtccact gcctcttcgt cagacgctgc
     9001 atttgggaag acttttttag cccattccaa accagaggct gcaccgagtg tccagctgat
     9061 tttgttagct tgagatgctt gccgcattgg gttcaaagct tggctgagtg cacgagcgtt
     9121 gcgagacaat ttctctggat caacgccatc gtaagcacct gggtcttctg acaagacaac
     9181 caaacggcta gccttacgct ccaagaggta gttcatttca gtaatgcgtt gtggatgaac
     9241 ttgttccaag agttccacat cgacattgac caaccgctca cgcgcaatca catcgtccaa
     9301 ccagttgacc aagacttcct tagcaccgtg agcgtaagct tctttgacaa tcaagcgtgc
     9361 caactcagcc tgctccacac cgattgtcaa ttgaaccgtg tgaccaggtt ggacattgat
     9421 acctgttgaa accaagagtt tagcatattt agcgagattt tctttaaaat ttggtaatac
     9481 catctttttc tcctttgtac tttgaaatac cctattattg tatcatattt taagctagac
     9541 agataaaaaa acttcctgct gatacaggaa gttgaaaagg ttagctctgg gagatagttg
     9601 aagcttggag atgaaacgaa tggagttcgt gtcaacaagc cgcaggcata accctgctcc
     9661 cctcttgttt taagggaaca ggctgaaaaa ctccactgga gctttacact catcacatca
     9721 agtcaacaac gtctgatccc atcgcagaat aaagttttca gtttgctttt agtactagct
     9781 ctaactatct gggagatagt tagagctagt tcgtgtcaac agctgcaggc tgcttcaaca
     9841 gtcagggtag tgactgttga aggttggaaa tcttacttac gatagtaagt aacgctcgta
     9901 acgtacgcca aagcgagttc aaacaatcca gtggattgtt tgaagttgga aataaggaaa
     9961 cgaagtttcc tcatctgccg acgtaataaa gcaagctgta agtatgtata ctcaatgaaa
    10021 attgaagtca gactaggcga cgcagatgta gatagaacta aggttcatca catcaagtca
    10081 acaacgtctg acttcaattt tcgcagagta ttagttacca aaaaccttta cacggtcccc
    10141 atccgccata tagtctttgt ctgctgctgg agctgcaatg cttccgaatg gtgcttgggc
    10201 acggagtttc cagttagctg ggataccgta cttttcagca acttgtgcat caaccaatgg
    10261 gttgtagtgt tgtacgttca taccgatatt tttctcagca aaggccaacc atactgcgta
    10321 caagttgata ccgtgagctt gttcagacca gattgggaag ttttcagcgt aaagtgggaa
    10381 gctttcttgc aagcctttga ccacgtcttg gtcttcgaag aacaagatag tacctgcacc
    10441 tgctgcaaag ctagccaaac gaccttttgt gccttcaaac gcttctgctg gcgttacttt
    10501 ttccaattcg ctgtaggcaa tttcgttcca gaaagcttct gactccgcac caaaaagtac
    10561 cactgcacgg cttgattgtg agttgaaagc tgatggagat tctttcatgg ctttctcaac
    10621 aagtgctacc acttcttcat ttgatactgg caagtcttta ccaagtgcgt agattgaacg
    10681 gcgagtttct tgaagttttg caaagtttga catatgtttt cctcttttct tattgttact
    10741 acatagtagt tttttatcac tatgtagaga ttatatacct atcaacaaca ttagtcaaga
    10801 ggtttgactt catttttaaa aaaaattcac tgcttccaaa agaaacagtg aacaagttta
    10861 aaacaaatca tcaaagagac tgagctggtt atcctctggc attttaccga ggatgcccat
    10921 ttcatccatt ttttcgacca gtgtacctga caatccacca cgcttacgga gttctgtctt
    10981 ggagaggaat tctccctctg cacgcgccgc cacaacctgc ttagcaacgt tctctcccag
    11041 accatccata gcgacaaatg gtgggatgag ggtgtcatct tcaatcaaga agtccgtcgc
    11101 atgggacttg taaaggtcca atttcccgaa cttgaagcct cgttccagca tttcatttac
    11161 caattcaagt gtggtataga gatcctgctc aacgttcgaa gcttcattgt ttttcttctt
    11221 gagggcgatt tcttccatct tggccttgac tcgttccaag ccaccggaca tggttgccaa
    11281 atcaaaggcc ttggcccgaa tagagaaata ggcacagtaa tagtagattg gataatgaac
    11341 cttgaagtag gcaacccgca aggccatcat aacataagca gccgcgtggg ctttagggaa
    11401 catgtacttg atttttccac aggattcgat gtaccagtct ggcaccttgt tatccttcat
    11461 agcttggatg tagccgtttc gctcttcctc agaaatcttg agccacaagc ccttccgcac
    11521 ccgctccatg atgttaaaag ccatcttggg tggcaaacct gcgtgcataa gataaaccat
    11581 gatgtcatcc cgacaaccga taaccgtgga tagatcggca attcctgcct taatcaagtc
    11641 ctgggcattg cccaaccata cgtctgtacc gtgggataga ccagacagct gcaagagttc
    11701 cgcaaaggtg gtcggtttag tttcctccac catcccacgt acaaagttgg ttccaaattc
    11761 aggaatgccc aacatccctg tcggcgtccc aatctgctct ggggtaaccc ccagaatttc
    11821 cgtaccagag aagagggcca tcactccctt atcatcagct ggaatagtct gcggatcaat
    11881 gcctgacaag tcctgcaact tgcggaccat ggtcgggtca tcgtggccca gaacatcgag
    11941 cttcaagacg ttttcatcaa tatcgtggaa gttaaagtgg gtagtctgcc agttggccgt
    12001 cacatcatcg gcaggatact gaacaggtgt aaagtcatag acatccatgt agtcaggaaa
    12061 tacgataatt cccccagggt gctgaccagt cgtccgtttg acaccggcag caccagcagc
    12121 caagcgttct acttctacat cacggtagaa tttgccgtaa tcccgctcat acccccttac
    12181 aaaaccatag gcagtcttag cagctaccgt acctaccgtt cctgcacgga aggcattttc
    12241 ttcaccgaaa atatcccgaa catccaaatg ggcagagggt tggtcatccc ctgagaagtt
    12301 caagtcaata tcgggaacct tgtctccatc gaaaccaagg aaggtctcga aaggaatgtc
    12361 ctgtccatct tttttatact tggtcccaca cttttcacaa tccttgtctg gcaggtcaaa
    12421 acctgaacca taggaaccat ctgtgataaa ttcactgtgt tgacaatttg gacagacata
    12481 gtgaggaggc atagggttta cttcggtaat cccaatcatg gttgcaacga aactggagcc
    12541 gacagacccc cgtgaaccca ccaggtagcc ccgctcgttg gaacggtgca ccaacatctg
    12601 cgacgccaag taaatcacgg cgaatccatt acccagaatg gacgttaatt ccttctcaat
    12661 ccgcaggtcg ataatatctg gaagaggatt gccataaatt tcaaaggctt tctgataggt
    12721 caattccgca accgtttcct cggccttctc aatataaggc gtatagaggt cggtcttaac
    12781 cacctgaaca tcttcaaacc ggtccagcat ggcattggga ttggtaatga caatctcacg
    12841 ggccagactt tctcccaaga atgcaaactc gtccaacatc tcgctggtcg ttctaaagtg
    12901 ggcttttggc agtggtgctg gttgagcgtt ctcaccattt ccgatggtcc agttaatcgg
    12961 cgccccttga cctagagcac ggacaatgat ttcccgatag atttcctctt cggggtcaat
    13021 atagtggaca tttccagtcg ccagaacagg cagacctgcc ctacgtccta cctcaatcag
    13081 ctgcttgata gtctcttcaa tctctgccat gtccttaaac tgctccttgg caatcatggg
    13141 agcgtagagg gcaggtggca taacttcgat aaaatcataa taggctgccg ttttaaccgc
    13201 ttcatctatc cctttggaga gcaagtcatc gaagacctcg ccctcttgac aggctgttcc
    13261 tagtatcaag ccttcacgat gggcattgag aacggtccgt ggaatacgtg gaactccttc
    13321 aaaatacttg gtattggaaa gagaaaccag tttgaacata tttttcaaac caacctgatt
    13381 aatcacatag agcgtggcat gcttgacacg agccttctta taggaatcct ccgcaatcag
    13441 ctccgtattt agctggttga gattggtcaa attgtgcttc tccaaggcat cttttaggaa
    13501 gatgaagagc aggcgccctg tcgcctccgc atcgtagttg gccatgtggt ggtgttcaag
    13561 agcaacacca aaccgcttgg tgagaggacc taaaccatga cgcttaaagt cggggtaaag
    13621 gttacgagca aattccaagg tatcaatgac aggctggcta ataataggta agcctgctcg
    13681 ttcatagttg acattcataa agccaacgtc aaaggtcgcg ttgtgggcaa ccatgacgga
    13741 atcttgacag aaatcttgaa actcacgcag gacttgttct agaggtttag aaccacgcac
    13801 atgctcatct gtgattcctg tcagatctgt tgtaaattga ctgagcggat gacctggatc
    13861 gataaactca tcaaattctg caatgatatt gcccttgtgc atcttagatg ctgcaatctg
    13921 aatcagggca ttattgaccg cagacagacc ggttgtttcc acgtcaaaga ccacataggt
    13981 ggcatcagac aggactacat ctgcttcgtt gtaagcaatg ggcacagagt cctcgacaat
    14041 attagcctcc atcccgaaga gaggcttaat cccagcttta cgggcagcat gatagccatg
    14101 agggaaggac tggacattgc cgtggtcagt aatggccacc gccttgtgtc cccaggctgc
    14161 cgcacgtgcc accaagtcct caacggcagg cagggcatcc atggtagaca tgttggtatg
    14221 agcatgaaac tcgacccgct tctcaccctc aggcatgaga tctttgcgaa tttccttctt
    14281 gacctcttgg acctcctgta cgttcatagt caaatctcgg gtgaaattat tggtttccac
    14341 atttccacgt acccgcagcc agtttccctt tttgaccata tcaaacttct gggcctcttc
    14401 ctcattctta gcccacttct gcaaggtgaa ggacgaagta tagtcggtca tcttaaagtt
    14461 gataatgacc cgccccgtct tggtcgtctt ctgctcgacc tcaaagacca gaccctcaaa
    14521 gacaatccga ttctcctcgc tatccacctc aatcataggc gtaatctcag ccttttcgat
    14581 attgaccttg gcaggacgat ttttcttata ttctgggaca aatggctgag ctgcctctgg
    14641 tggtggcgcc atttgagcta gttgttcaag ggccgccaag ttttcttcat tagcctgctg
    14701 gtaaatttct tcattttgcg catggaaaat ctccgcttgt tgctgcgtca tttcctgaca
    14761 gacttggatg tccaccgcaa gattaccaaa accaaatcgc ttgtattgct ccacaagatt
    14821 tggcaggtga tttttccgaa aatgatctgt gtcaatggtt tcaggaccct ttatccacaa
    14881 aacaccatct ctataagcca cctctaatgg ctgaaaaaga gccttgaagc ctgcactctg
    14941 gcacaaatct tccgtaaaag cttctggata atatgcttct accaaaccag cttcaaaagc
    15001 ctccgcatcg ctgacaatag aaaattgaat cttattgccc accttttcaa actccgtcgc
    15061 caaacgagcc ttgaagagtt gatagtccat gagcggcaag ggggtttcaa aacggaaggt
    15121 aaattcccaa agtttgctga ccctgtgcaa gactactttc tcaatcgttg cagtcgaaaa
    15181 agcccctgat tgtcgtgcat caagaggcat tccgatttgt tgtagcaaga gttgaaactt
    15241 atctgacata cttatttcct ttgtagttcg ttagaaacat tttaccataa atgaaagaat
    15301 ttttcttgga ctaagccagg gacttttctg gcaggacacc accatttaaa ttggcttttt
    15361 caagctttcg tgttataata gagatagaaa aaggtagttg cgtcaacaac tacccaacgt
    15421 agaaccgtta aaaagacggt gactcgttta tattagacta taactcgtcc aacaactcgg
    15481 tcaaaagtgg ggacgggtta ttttttgtca ttttctttga agattttata gcacaagctg
    15541 actaaagcaa tggtaaagct accaaaggct agaatcgttt gtacaacttc aaaagctgtc
    15601 aaaagaatgc tcccccctt
//
LOCUS       DBNFCX010000049        15563 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.049, whole genome shotgun sequence.
ACCESSION   DBNFCX010000049 DBNFCX010000000
VERSION     DBNFCX010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 15563)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15563)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15563
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.049"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(65..1282)
                     /locus_tag="AC1PJC_001377"
     CDS             complement(65..1282)
                     /locus_tag="AC1PJC_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017648214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009037 - tyrosine-based site-specific
                     recombinase activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HIP6620363.1"
                     /translation="MAIKKMKTGSYQLRLYIPSDIQKKLGLGEYFDKRYKTRREAKNA
                     EAEILLMISDIRAGRHTSKTKNDITFKEFYDHYWLDAYKAGQTTNTNTPPVTSTVFQT
                     ENMFRLHILPMFGKYSLKYLMSNKQLVLNKLTNKANEYANFKVIRSYVNSVFDWAEEL
                     EMIEGNRLKKSISRIKPVKKIQIEREKDEEEMYLTSHELSQWLNAVEEDLINGDLTYM
                     DYTLFYTTFLLSDRKSETYALQWKHIDFINNKIYIVQALDRFGNVKATKGEKKTGFFV
                     SELLMTILAKWKEEQNVLLKKYKIRQTLKQFVFTYEDRNGGVNKRLHVDYLNYRMKSI
                     ERRHPELVHATPHMLRHTGASLAKLAGYSLNQISEALTHSDSKTTKGYINVIETIPKT
                     VGEIALENLPKNN"
     gene            complement(1295..1561)
                     /locus_tag="AC1PJC_001378"
     CDS             complement(1295..1561)
                     /locus_tag="AC1PJC_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017648213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HIP6620364.1"
                     /translation="MQVILQDEQVTEIQNLISHLLEDEIEKFREDNGVNSPFLNKKQA
                     CTYLGVSNNTLDTWILRGLPTIRIGKTIRFDKGEIRKWMNQLQY"
     gene            complement(1583..2686)
                     /locus_tag="AC1PJC_001379"
     CDS             complement(1583..2686)
                     /locus_tag="AC1PJC_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000849072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HIP6620365.1"
                     /translation="MKTIKRFSLLSILLAPLLAVLFLFVGASSSISTSSASTVNGLTY
                     VDHWSDGDAYTHNLLSHRYGITAEQLDGFLDSTGIAYDKNRINGKFLLEWSQKSGLDV
                     RAIVAIAQMESSYGTAGVATKSGANMFGYGAFDSNPDNATNFNDETAIVALTKQTIIN
                     NRNETFKIQDEKAQKHAKGTLNVASDGGVYFTDTSGSGKRRAEVMEKLDKWIDDHGGT
                     PKAPQNTSKTRDGGGVTSGDIPAGYSLTKAINTSGYSAGTYPWGQCTWFVWNRAKELG
                     ITFDPYMGNGGDWKYKAGYTTTGTPTEHSAVCFSPGQAGSDLTYGHIAFVEQVKSDGT
                     VLISESNAQGLGVISYRVFDAETAKQFTYVIGK"
     gene            complement(2689..4590)
                     /locus_tag="AC1PJC_001380"
     CDS             complement(2689..4590)
                     /locus_tag="AC1PJC_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000681130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4013 domain-containing protein"
                     /protein_id="HIP6620366.1"
                     /translation="MKHKHVKRLTILNLVIGFFITNRTVFASDVDYTYVKDNLSQITS
                     KVWFKDSWFGLDTTMLYLINKIVQAVFWLAKFLFTIFASIYDKLVESPELFASYVSDI
                     ISATASVFNSLRSVTFPIIGASMAIYLAYIYFIKHGLFFKTLLRLVLVFACSVLFFSK
                     YSDGTYVVARFYTNTTSVTTNLSSTVTKSLTGTKLTTPSSDGALTEYAKSAIWNPYSY
                     MNSDTADTDNGFSLTDEELKSLVDYNDGDDDFKVSNGHKETSIKDLAGSEDNPKNSML
                     KSNWGAMFSYAIVAVLESLLMGLILVFFAIMQFILNVALLILLVFTPLALIFAMVPTF
                     ENILFNMTKKLGGTIVLSGLMTLLATIALYFNNILTTITTAIGFENMIVGYVLKAIVL
                     VILWKKRDYFLSILTANRIHHISNRFTQRIDKAGRKLQDNTLGRVQKNTQAKLAVAGS
                     VLAGSTILAKEGLKAKTRQVTSTTYQNTGQAISDSLAKSKAKRAEQHGESYDLAFKEA
                     KAQQAHRSEQVSSAFLNIRRGIKNAEYGLYYAKSIATGDDHDKVKASEARNRSDEFGQ
                     AIQEKRIRVSQLRQSAYNQKSKERLQEQRKNRQERPVSHFKHYLEKEKAMRDQLSHLQ
                     PKTFRTQEV"
     gene            complement(4658..5269)
                     /locus_tag="AC1PJC_001381"
     CDS             complement(4658..5269)
                     /locus_tag="AC1PJC_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017766884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0070733 - AMPylase activity [Evidence
                     IEA];
                     GO_process: GO:0018117 - protein adenylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fic/DOC family protein"
                     /protein_id="HIP6620367.1"
                     /translation="MDRNRYEGYEYIDPDSLYTYPNSSVLKNKQGITDPEKASLNEHI
                     LTTERILDLNLNPIMVYSVKDILAIHGYIFQDTYEWAGNYRQVNISKSGNAFLPIQSF
                     ESGEMYLNSLITEFHEKANSRDELITSLSKILDNLNYFHPFREGNGRTQREVIRVLAL
                     SKGFMGQIAPEINAEVYNLYMDGTVYGNLEKLEQLFDKILIKI"
     gene            complement(5262..5450)
                     /locus_tag="AC1PJC_001382"
     CDS             complement(5262..5450)
                     /locus_tag="AC1PJC_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014713950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620368.1"
                     /translation="MTFDINKEELTIMGVKFDNYDDFNAVWYAVGSSMIENYQPTVQE
                     IEHFKAYITNKRKELKLG"
     gene            complement(5499..7997)
                     /locus_tag="AC1PJC_001383"
     CDS             complement(5499..7997)
                     /locus_tag="AC1PJC_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018369053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HIP6620369.1"
                     /translation="MNYQNNIWDIKDNLILRKDGSVFAIYQIPSKVINSVDGKTKEKH
                     KDLVYTALSHLRNYHDFEIRMIPMDLNLYGRYKKLALDIDWDSEVGDLADYVLNQTIN
                     HLENDIGQLYEYHYFILVPLKSLSISMDLKSVVYEGYRSSRNLVLNTFGIGETVPVNW
                     AETYRNQKEVLENNLSLLNAKPLSTKENIFLHRLQFMRGQFYNKEAEIARVENSIENL
                     DETNIEFEYVNIIKLNNMGETSYVAMLPINGLPENMSYLHLQEELQAIRFPVESNFKI
                     QFSLPKGVFSLLGKAKRARQRLKNTISEAEEVEDVQKGSVIKSKFLLEDLQGKFDKDE
                     PLVTYLHTLTITAFTLEELKAKYELLFATLNQLSIEVVRANADQVYLFYKNRMTETLD
                     RDDRNFLQAMSLKAFCENLFFMTKKVGTDIGFSIGRIDNQIDSWQGDYKKAIEASSSP
                     VFTNLLQANKLGVKDKSTNNPHVAIIGETGTGKSFLTKLLFTYHSFLKTKILYIDPKA
                     EMRKQYEKVLKEHQEKGNFKELQDYIQSINFITLDARDKNNHGALDPLIFLKGQEARD
                     LADSMIDTLLGKDNSLKIRNAYLKSLDKYLAKREHGEKVGMIHVFKDLMKHPDTSVQE
                     AGDFLLTAVNQSILSLCFSDGQNDGISVDSKITILEINGLNLPSDNRNVDLTSDEKKS
                     LTIMYALGYYCTKFGKQDRTIETIEFFDEAWFFNSTTVGKQILKRMKRVGRSENNFLV
                     FITQSVYDLSSEEDGTGFGSVFAFLEDTEIDAVLNYLKIPNTETTKEWLGNMTMAQCI
                     YLDTFGRKERITVDGMFPEITRLFNTVETKLQAV"
     gene            complement(7981..8397)
                     /locus_tag="AC1PJC_001384"
     CDS             complement(7981..8397)
                     /locus_tag="AC1PJC_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000348517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TcpE family conjugal transfer membrane protein"
                     /protein_id="HIP6620370.1"
                     /translation="MDGDTKDKHLYSYKQALSQPYWIQKINDDFSLQSPIKFSRIVYA
                     VTIFSILYFPSEKILSFLPLGLRLTLSGIIAWVFSETLANLIIDGKAFIFYLWDYLKF
                     YFQYGMRHESIYLNKGIIYKRPQAITKRKETHELSK"
     gene            complement(8407..8625)
                     /locus_tag="AC1PJC_001385"
     CDS             complement(8407..8625)
                     /locus_tag="AC1PJC_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000175077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TcpD family membrane protein"
                     /protein_id="HIP6620371.1"
                     /translation="MTLQSLFEWFVNNIGVWIVAGFAGWKFIEAVRDQRIGRAIMSIA
                     IGGASFYFLKNPTTILNSVADIFSKIFS"
     gene            complement(8622..9566)
                     /locus_tag="AC1PJC_001386"
     CDS             complement(8622..9566)
                     /locus_tag="AC1PJC_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017648208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HIP6620372.1"
                     /translation="MLPQKPKFLKRIKPKKRQEIREVNQKTMNFLFLGGLTVIIALAT
                     LSIVASLTRSNKSQTIIQEVKKEDILINYQLQYFLNDYVKSYFTLSDDSSTKSEQIEK
                     LNGFYNVVPETKNQGQVRSTTELISAKILMIEKDIATYQVTYTTGKEKDKQEITTGFA
                     VPFGEKDGAYFISGLPWYVRLTDTKATGFDSSDSVTLVDDTETNQKTKEKRDEFLTLF
                     FTNYTSNQENLDLIADDLLALENTTFKSLDYSYYTKDGKTITAYAQVTFEIAGNTHSE
                     NFTLTLRKKDQSYYVQRLSHTISKDYAQSHTENTGETK"
     gene            complement(9580..9843)
                     /locus_tag="AC1PJC_001387"
     CDS             complement(9580..9843)
                     /locus_tag="AC1PJC_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000402095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620373.1"
                     /translation="MEIEMLKQDTGEFRARLSYFVQEFLKENEDHIKNMVKGEVFRKR
                     KEITLSQEAQYYDITFIFKKGGLVKKSSLEVIVNGAMTAKIQL"
     gene            complement(9853..10125)
                     /locus_tag="AC1PJC_001388"
     CDS             complement(9853..10125)
                     /locus_tag="AC1PJC_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000191832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620374.1"
                     /translation="MTQGKLEKDILSTASELGTQLASYHLEEAWTTAGRLHNLLKSEE
                     VIHLPADQLEAIRNELKGYYLTNGEVSRLQKQLAAKGHKLQELSNK"
     gene            complement(10145..10618)
                     /locus_tag="AC1PJC_001389"
     CDS             complement(10145..10618)
                     /locus_tag="AC1PJC_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017648205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620375.1"
                     /translation="MIGTIRIIQNGNSKELAHVDLLRFDEEDIRQRLADKGYPYNSEL
                     VVAGIPDWNIDTHLTFQEIRLLKLCYEKLYDHDEYIISYLLQHHWKVLDVISVYYKFA
                     SKDEVEALNLLLKDCDKTEVIRIFYQANTWINCIQAYLSSGELLNTPNGFYRKVG"
     gene            complement(10615..10851)
                     /locus_tag="AC1PJC_001390"
     CDS             complement(10615..10851)
                     /locus_tag="AC1PJC_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000418738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620376.1"
                     /translation="MELFTARSRYRSEGVTWVWYRNDEEEVYSELQLSEVFRLIRQEL
                     DKFIEQGILTKDQAYDLANDWLAYDEFVEGMMYA"
     gene            complement(10864..12018)
                     /locus_tag="AC1PJC_001391"
     CDS             complement(10864..12018)
                     /locus_tag="AC1PJC_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000375484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HIP6620377.1"
                     /translation="MSLSSLKSYEIGRREFTLEKFKEIKTHLGYSFSDSSHPLRLMID
                     YLRITFKNVHHIKDFIETYLYVNFQDFTSQETSLMTYNHLYKRGDIWLFDYFDKEDRD
                     NYQVTLQLSGQGCRQMELILEREGITWQDFLAKMLYERNDMKVTRIDLALDELYRGKS
                     EEANHFHLSDMINKVYQNYVTFDRLKVWSHIGGGNLSTSSDEEERQGISLYFGSRKSN
                     MFFNFYEKRYEFAQKEGISVEEALEIFGVWNRYEIRLSQGKAHLLVEHFVEGQELGNL
                     ARGLINQEMMVYNGVGKYGAYIPDQKWQEMFGSAEPLKLSIKPEPYSIDRTVRWLLYQ
                     VSNSLAYVEEADKIMNTEYLKMIQNTGKPTEKMEHELKFLKENYQLMTTT"
     gene            complement(12330..13997)
                     /locus_tag="AC1PJC_001392"
     CDS             complement(12330..13997)
                     /locus_tag="AC1PJC_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017648203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsK/SpoIIIE domain-containing protein"
                     /protein_id="HIP6620378.1"
                     /translation="MSLWHKRGRRVRKYHKHIKGITFALLYLPYLLGCGFLLGLNYED
                     LLTQPLYYGLTTGSLLLGGLIVSFLIQRYLYAHLLAFSKLDNLRIMANFLLENGYYLS
                     KKIKRDNQTKEKIILPKVYLKQSKYDLNASFILQGNKFQDKFLTLGNTLEIQHDGDFT
                     GKKFSKGYVTYTIAIDQFAGRLNLSDVKMTKQGLRLMKDVYWDFVKQPHLLIGGGTGG
                     GKTVLLMILLYGLAPIAVIDICDPKQSDLSSFADVPIFKGHVFITKEKIVECLKSNVE
                     EMEERYRYMKSQPNFLAGMNFSQFGLRPKFIFFDEWAALMAKLEGNYQLQQQVNQYLT
                     QLILEARQAGIFVIMAMQRPDGEYIKTSLRDQFMKRLSVGHLEDTGYTMMYGDANKNK
                     EFKYIDEIDGKKVIGRGYIANAGEIAREFFSPNVPFDKGFSFKEAFMAMTPHESSSAI
                     FCLQNVPTSAITEELEEKAQPDSYTMAEAKQELDKTYDQIKKLVNLIEKDNHRSFNRQ
                     DGKVMLSPDDLYDLEVIFDSMDKNNLTYKDAVEAFFQPLSETAIGGS"
     gene            complement(13994..14440)
                     /locus_tag="AC1PJC_001393"
     CDS             complement(13994..14440)
                     /locus_tag="AC1PJC_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018164040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620379.1"
                     /translation="MAKVGLKFDKVDITDKRYLDITPALKIDEVFGKLTWRGINEVEQ
                     KYENDTTQPRNQDGTYPQIPTGEILSTKVAIKSSTQHGTEEFSIIGMLPSEIEALGLK
                     FGDEVELSGIIVTYSSVSGGVYKLFAQGITKKNAPAPKADQGKSKE"
     gene            complement(14482..14775)
                     /locus_tag="AC1PJC_001394"
     CDS             complement(14482..14775)
                     /locus_tag="AC1PJC_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015016640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytoplasmic protein"
                     /protein_id="HIP6620380.1"
                     /translation="MIKETLKMNPDFIGTAIYEKQGTAPRTVFGKQGQFQRHEVVNEK
                     HLQFYVITPATAEVFEEDAEVELVNPIFYPDNINGRDMAPALNVFAEKIVVKK"
BASE COUNT         4449 a         2911 c         2988 g         5215 t
ORIGIN      
        1 atcttgggtg tctttttttg ctcaaaaaat cgaaaattat ctgaaaagtt atctgaaatt
       61 tatcttagtt attttttggt agattttcta aagcaatttc cccaactgtt tttggtattg
      121 tttcaatgac attaatataa ccttttgttg ttttagaatc gctatgagtt agtgcttctg
      181 aaatttgatt aagtgaatat cctgccaatt tagctaatga agctcctgtg tgacgtaaca
      241 tatgaggtgt agcgtgaact agctcagggt gacgtctttc tatagatttc attctatagt
      301 tcagataatc aacatgaagt cttttgttaa cacctccatt tctatcttca taagtaaaga
      361 cgaactgttt gagagtctgg cggattttat attttttaag aaggacgttt tgctcttctt
      421 tccatttcgc aagaatagtc attagaagtt cagaaacaaa gaaacctgtc ttcttctcgc
      481 ctttggtagc tttgacatta ccaaacctat ctagagcctg aacaatataa attttgttgt
      541 taataaaatc aatatgtttc cattgaagag catatgtttc agatttcctg tctgaaagca
      601 gaaaggttgt atagaaaagg gtgtaatcca tataggtaag gtcgccatta atcaggtctt
      661 cttcaacagc attcagccac tgagatagtt catgactggt caaatacatt tcctcttcgt
      721 ctttttctcg ttcaatttgt atttttttga caggttttat acgactaata ctttttttca
      781 atctatttcc ctctatcatt tctaattcct ctgcccaatc aaatacggag ttgacatagc
      841 tccgtatgac tttaaagttg gcatattcat tagctttatt ggtaagtttg ttcagaacta
      901 attgcttatt actcataagg tattttagtg agtacttgcc aaacataggg agaatgtgta
      961 atcgaaacat gttttcagtt tgaaaaactg tactagtaac aggtggagtg ttggtatttg
     1021 tagtctgccc agctttatag gcgtcaagcc agtaatgatc ataaaattct ttaaaagtaa
     1081 tatcattctt tgttttacta gtatgtcttc ctgctcttat atcagaaatc attaataata
     1141 tttcagcttc tgcattttta gcttctctac gagttttata acgcttatca aaatattctc
     1201 ccaatcctag ctttttttga atatcgctag gaatatatag cctgagctga tagcttcctg
     1261 tcttcatttt tttgatagcc atagttacct ctttctagta ttgtagttga ttcatccatt
     1321 tgcgaatctc tcctttatca aagcgaattg ttttcccaat tcggattgtt ggtaagccac
     1381 gaagaatcca tgtatctagc gtattattag atacccctag ataagtacag gcttgtttct
     1441 tgttaagaaa tgggctatta accccattgt cttctctgaa tttttcaatt tcatcttcga
     1501 gaagatgact aataaggttt tgaatttctg tcacttgttc atcttgtaaa ataacttgca
     1561 tagttttatt cctcctgtta atttattttc caatcacgta agtgaattgt ttggctgtct
     1621 cagcgtcaaa gacacggtaa gagataacgc ctaagccttg tgcatttgat tctgatatca
     1681 gaacagttcc gtcagatttc acctgctcta cgaaagcgat atgtccataa gttaggtctg
     1741 accctgcctg ccccggtgaa aaacaaacag cactatgttc agtaggggtg cctgttgtgg
     1801 tatagcccgc tttgtatttc cagtctcctc cattccccat ataagggtca aatgtgattc
     1861 ctagttcttt cgcacgattc cagacaaacc acgtacattg tccccaagga taagtgcctg
     1921 cactatatcc agaggtatta atggcttttg ttaagctata acctgctggt atatctccag
     1981 aagtaactcc gcctccatct cttgttttag aagtattttg gggtgctttt ggtgttcctc
     2041 cgtggtcgtc aatccatttg tccaactttt ccataacttc ggctcgcctt tttcctgagc
     2101 cagaagtatc cgtgaagtac actccaccgt cactagctac attgagtgtt cctttggcat
     2161 gcttttgagc tttttcatct tggattttga aggtttcatt gcgattatta atgatggttt
     2221 gtttggttag tgccactatg gcagtttcat cattaaagtt tgtggcattg tcaggatttg
     2281 aatcaaaagc accgtagcca aacatattag cacctgactt agtggcaact ccagcagttc
     2341 cataggagct ttccatctga gcaatcgcca caatcgctcg gacatctaag ccagattttt
     2401 gagaccattc tagtaggaat tttccattga tacggttctt gtcataggcg attcctgtag
     2461 aatctaagaa gccatctaat tgttcagcgg taatcccata acgatggctt aacagattat
     2521 gggtataagc gtcaccatca gaccaatggt cgacataagt caaaccatta actgtagaag
     2581 cagagctagt tgagatggat gaactagccc ctacaaaaag aaaaagcacc gctaaaagtg
     2641 gtgctaatag gatgctcaga aggctaaatc gtttgattgt tttcatgttc acacctcctg
     2701 agttctaaat gtttttggct gtaaatgaga cagctggtca cgcatggctt tctctttttc
     2761 aagatagtgt ttaaaatgac ttacaggacg ttcttgacga ttttttcgtt gctcttgaag
     2821 tctttcttta gacttctgat tataagcaga ttgacggagt tgagatactc gtattcgttt
     2881 ttcttgaata gcttgtccaa attcatctga acgattacgt gcctcactag ccttgacttt
     2941 atcatggtca tcaccagtcg caattgattt agcataatat agtccatatt ccgcattttt
     3001 tatcccacgt ctaatattta agaaagcaga tgatacctgt tcacttcggt gtgcttgttg
     3061 agcttttgcc tccttaaagg caaggtcata actttcacca tgctgttcag ctcgtttggc
     3121 tttagacttt gctagagaat ctgaaatggc ttgaccagta ttttgatagg tggtactagt
     3181 tacttgtctg gttttagctt tcaacccttc tttggcaagg atagttgaac cagctaaaac
     3241 actgccagca acagctaatt ttgcttgagt attcttctga acacgcccta aagtgttatc
     3301 ttggagtttc cgtcctgcct tatcaatacg ctgagtgaat cggttagaaa tatggtggat
     3361 acgattagct gtcaaaatag acaagaagta gtctcgtttt ttccatagga taactaatac
     3421 gatagccttt aatacataac ccacaatcat attttcaaaa ccgatagcag tagtaatggt
     3481 cgttagaatg ttattaaagt agagagcaat ggttgctaga agtgtcatta agccagacaa
     3541 aacaatagtc ccacctagtt tcttggtcat gttaaagaga atattctcaa atgttggtac
     3601 cattgcaaaa atcaaagcaa gtggtgtaaa gactagaaga atgagaagtg ctacatttag
     3661 gataaattgc atgatggcaa aaaagactaa aattaacccc ataagtagtg attcaagaac
     3721 cgctactatg gcataggaga acatggctcc ccagttggat tttaacattg aatttttggg
     3781 attatcttca cttcctgcta ggtctttgat ggatgtttct ttatggccgt tagagacttt
     3841 gaaatcatca tcaccatcat tgtaatcaac taaacttttc agttcttcat ctgttaaaga
     3901 aaaaccgttg tcagtatcgg cagtatcaga gttcatatag ctgtaaggat tccaaatagc
     3961 agacttggcg tattctgtta aagcaccatc agaacttgga gtggtgagtt tcgttcctgt
     4021 taggcttttg gtaacagttg aagagaggtt tgttgtgaca gaagtagtat tcgtataaaa
     4081 tcgtgcgaca acataagttc catcactgta cttagagaaa aataaaaccg agcaagcgaa
     4141 gactaaaacg agtctaagga gtgttttaaa gaataagcca tgtttaataa aatagatgta
     4201 agctaggtag attgccatgc ttgcaccgat aatagggaac gtgacacttc ttaaactgtt
     4261 aaaaacagaa gcagtagctg atataatatc agaaacatag ctggcaaaaa gttcagggga
     4321 ttctaccaat ttgtcataaa ttgacgcgaa aatggtgaat aagaatttag ccagccagaa
     4381 gacggcttgg acaattttgt taattaggta caacatggta gtatctaaac caaaccatga
     4441 gtctttaaac caaactttac ttgtaatttg ggataggttg tctttgacat aggtgtaatc
     4501 aacatcagaa gcaaaaactg ttctatttgt gataaaaaaa ccaataacaa gattgagtat
     4561 cgttaaacgt ttgacgtgtt tgtgtttcat tggactcctt tctaggtata atttggtatg
     4621 aaaaaaagca ccttagatgg ggtgctagta tcgaatatta aattttaatt aatatcttat
     4681 caaaaagttg ttctaatttt tcaagattcc catatactgt tccatccata tagagattat
     4741 aaacttccgc atttatttca ggagcaattt gtcccataaa accttttgaa agtgctagaa
     4801 ctctaataac ctccctctga gtacggccat taccttctct gaaaggatgg aagtagttga
     4861 gattatctaa aatttttgaa agagaagtaa tcagctcatc ccttgaattt gctttctcat
     4921 gaaattcagt tattaggcta ttgaggtaca tttcacccga ttcaaaggac tgaataggta
     4981 gaaaagcatt tccacttttt gaaatattaa cctgtctata attgccagcc cattcatagg
     5041 tatcttgaaa aatgtatcca tgaatagcta gaatatcttt gaccgaatat accataatag
     5101 gattaaggtt taagtccaaa atacgttcag ttgtcagaat atgctcattt agactggctt
     5161 tttcagggtc ggtgattcct tgtttatttt ttagtacact tgaatttgga taagtataga
     5221 gactgtctgg gtcaatatac tcatagcctt catatctatt tctatccaag ttttaattcc
     5281 tttcgcttat tagtaatata agctttaaaa tgttcaattt cttgaactgt gggttggtaa
     5341 ttttcaatca ttgaagagcc aaccgcgtac catacggcat tgaaatcatc gtaattatca
     5401 aatttaacac ccatgattgt caattcttct ttgtttatat caaacgtcat acggaagtct
     5461 cctttatttt tataagtcta ttataccata tctatgcttc atactgcttg aagttttgtt
     5521 tcaactgtat taaagagtcg agtgatttct gggaacatcc catctacagt aatccgttct
     5581 ttacgtccaa aggtatcaag ataaatacat tgagccatag tcatattgcc aagccactct
     5641 ttggtggttt ctgtattagg gattttaagg tagttcagaa cagcgtcaat ttccgtatct
     5701 tcaaggaaag caaatactga accaaaacct gttccatctt cttcacttga taggtcatag
     5761 acagattgcg taatgaagac taagaagttg ttttcagaac gtccaacccg tttcatccgc
     5821 ttgagaattt gttttccaac cgtagtagag ttaaagaacc atgcttcatc aaaaaattca
     5881 attgtttcaa tagtcctatc ttgttttcca aatttggtgc agtagtaacc taaagcatac
     5941 atgatggtta ggcttttctt ttcatcagaa gtcaaatcta cgtttcgatt gtcacttgga
     6001 aggttaagac cgttaatttc caagatagtg attttagaat caacggaaat accatcattt
     6061 tgaccgtctg aaaagcaaag agatagaata gattgattaa cggcagttag taggaagtca
     6121 ccagcttctt gaacgctagt atcagggtgt ttcatcaagt ctttaaagac atgaatcata
     6181 ccaacttttt ccccatgttc tcgtttggct agatacttat ctagactttt aagataagca
     6241 tttcggattt tgaggctatt atctttacca agtaaagtat caatcataga atctgctagg
     6301 tcacgtgctt cttgtccttt aaggaaaatc aaagggtcta aggcaccgtg attattttta
     6361 tccctagcat ctagtgtgat aaaattgatt gattggatat aatcttgaag ttctttgaag
     6421 ttgccttttt cctgatgttc tttcaatact ttctcatact gtttgcgcat ttcagctttt
     6481 gggtcaatat agagaatttt agttttaagg aaagaatgat aggtaaagag tagtttagta
     6541 agaaaggatt tccctgtccc tgtttctcct ataattgcca catgagggtt attggttgac
     6601 ttatccttta cccctaactt attagcttga agaaggttag taaagacggg gctagaagaa
     6661 gcctcaatgg cttttttata atctccttgc caagaatcaa tctggttatc aattcgtcca
     6721 attgagaaac caatatcagt tccaactttc ttagtcatga aaaagagatt ttcgcagaaa
     6781 gctttcagtg acatggcttg tagaaaattt ctatcgtcac ggtcaagcgt ctcagtcatt
     6841 ctattcttat agaacagata aacttggtct gcattggctc tgaccacctc aatggacagt
     6901 tgatttagcg tagcaaataa gagttcatat ttggctttta gttcttctaa agtaaaagcc
     6961 gtgatagtta aggtatgaag ataagttact aggggttcgt ctttatcaaa ttttccttgc
     7021 aagtcttcta gtaagaattt acttttaatg acagaccctt tttggacatc ttcaacttcc
     7081 tcagcttctg aaatggtatt ttttaaccgt tgtctggctc gtttggcttt acctagaagt
     7141 gaaaagaccc cttttggaag agaaaattga attttaaagt ttgattccac aggaaagcga
     7201 atagcttgta attcttcttg aagatgaagg taggacatgt tttcgggtaa accgttgatt
     7261 ggaagcatag ctacatatga cgtttctccc atgttgttca atttaatgat attcacatac
     7321 tcaaattcga tattagtttc atcaaggttt tcaatggaat tttctactcg tgcaatttca
     7381 gcctctttat tgtaaaattg acctctcata aattgaagac gatggagaaa aatattctct
     7441 tttgtgctta gtggttttgc attaaggagg gagagattgt tttcaaggac ttctttttga
     7501 tttcgatagg tttctgccca attaacagga accgtttctc caataccaaa agtattcagt
     7561 accaagttac gtgaggagcg gtagccctca taaactacag attttaagtc cattgaaatt
     7621 gatagggatt tcagagggac aaggataaaa tagtggtatt catagagttg tccaatgtca
     7681 ttttctaaat gattgatagt ctggtttagg acataatcag caaggtcacc aacttccgaa
     7741 tcccaatcaa tatctaaagc taatttcttg taacgcccat agaggtttaa atccattgga
     7801 atcatacgaa tttcaaagtc gtgataattt ctaaggtgac taagagcggt ataaacaagg
     7861 tctttgtgtt tttcctttgt tttgccatca acagaattaa tgactttcga ggggatttga
     7921 tagatagcaa agacggatcc gtctttacga aggataaggt tatccttgat gtcccaaatg
     7981 ttattttgat agttcatgtg tctcctttcg ttttgtgata gcttgtggac gtttgtatat
     8041 aatcccttta tttaagtaga tagattcatg tctcatacca tattggaagt aaaatttgag
     8101 ataatcccag agataaaaga taaatgcttt tccatcaatt atcaggttag cgagggtctc
     8161 agagaagacc caagctataa tacccgatag cgttagtctt agtcccaaag gaagaaaaga
     8221 aagtattttt tccgaaggga agtagaggat agaaaagatg gtgacagcat aaacaatacg
     8281 tgagaatttg attggtgact gtagagagaa gtcatcattg attttttgaa tccaataagg
     8341 ttggctgagt gcttgtttgt aagaataaag gtgtttatct ttggtatcac catccatatt
     8401 tgcctcctag ctaaaaatct tagaaaaaat atcggcaacc gagttgagaa tggttgtagg
     8461 attctttaag aaatagaaag aggcaccacc aattgcaata gacatgatag ctcgtccaat
     8521 gcgttggtct cggacggcct caatgaactt ccaacctgca aatccagcaa caatccatac
     8581 gccgatgtta tttacaaacc attcaaataa actttgtaat gtcattttgt ttctcctgta
     8641 ttttctgtgt gtgattgggc atagtcctta ctaatcgtgt gagaaagtct ttgaacgtag
     8701 taggactgat ctttttttct aagcgtgagg gtgaagttct cactatgggt atttccagct
     8761 atttcaaatg tgacttgtgc ataagcggtg atagttttac cgtccttggt atagtaactg
     8821 taatctaagc tcttaaatgt ggtattttca agagccagta agtcatcagc aatcaagtca
     8881 agattttctt gatttgatgt gtagttggta aagaagaggg taagaaactc atctcgcttt
     8941 tcttttgtct tctggttagt ttcggtatcg tcaacgagtg taacactatc actagaatca
     9001 aatcctgttg ctttcgtgtc cgttagacgt acgtaccaag gtaagcctga aatgaaataa
     9061 gcaccatctt tttcaccaaa gggaaccgcg aaacctgttg taatttcctg tttatccttt
     9121 tccttgcctg ttgtataggt tacttgatag gtggcaatgt ctttttcaat catcaggatt
     9181 tttgcactga tgagttcagt ggtagagcga acctgtcctt gatttttagt ttctggtaca
     9241 acattgtaaa agccattgag tttttcaatt tgctcacttt tagttgaact atcatcagat
     9301 aatgtaaaat agcttttcac ataatcattt aaaaaatatt gcagttgata gttgataagg
     9361 atatcttctt tttttacctc ttgaatgatt gtctgggact tatttgagcg agtaagactt
     9421 gcaacaatag atagagttgc taaggcaatg attaccgtta gcccaccaag gaaaagaaaa
     9481 ttcattgttt tttgattgac ttcacgtatt tcttgccgtt ttttaggctt gatacgttta
     9541 agaaattttg gtttttgagg taacattttc tctcctttct tagagttgaa ttttagcggt
     9601 catagcgcca ttaacaatga cttcaaggct agattttttg actagcccgc cttttttaaa
     9661 aataaatgtt atgtcgtagt attgcgcttc ttggctaagg gtaatttctt tacgctttcg
     9721 aaacacctct cctttgacca tatttttgat atggtcttcg ttttctttta aaaattcctg
     9781 tacaaaataa gacaggcgag ctctaaactc acctgtatct tgttttaaca tttcaatttc
     9841 cattggccct ccttatttat ttgatagttc ttggagtttg tgtcctttag ctgctaactg
     9901 tttttgaaga cgactgactt caccattggt taggtaataa cccttaagct catttcggat
     9961 agcttctagt tggtcggcag ggagatggat aacttcttct gacttgagta agttatggag
    10021 tcgcccagcg gtagtccaag cctcttctaa gtgatagcta gctaattgtg ttccaagttc
    10081 tgaggcagtt gataaaatat ctttttcgag ttttccttgt gtcatagtgt cccactttct
    10141 ttgtttagcc gacttttcga taaaagccgt taggtgtgtt taataactct cctgatgaga
    10201 ggtaagcctg aatacagtta atccaagtat tagcttggta gaatatcctg atgacttctg
    10261 tcttatcaca gtctttaagg agaagattga gtgcttccac ctcatcttta ctagcaaatt
    10321 tgtaatagac tgaaatgaca tctaagactt tccaatggtg ttgaagtagg taagaaataa
    10381 tatactcatc atggtcataa agtttttcat aacacagttt gagtagccga atctcttgga
    10441 aggttagatg agtgtcaatg ttccaatcag gaataccagc cactactaac tcactattat
    10501 agggatagcc tttgtcagcc aatcgttgtc gaatatcctc ttcgtcaaat cgtagcaaat
    10561 ctacatgagc taactctttt gaattgccat tttgaataat gcgaatggta ccaatcatgc
    10621 atacatcatt ccttccacaa attcatcata tgctaaccaa tcattagcta ggtcataggc
    10681 ttggtctttg gttagaatac cttgttcaat aaatttatcc aattcttggc gaatcagacg
    10741 gaaaacttcg ctgagttgta attcagaata aacttcttct tcgtcattac gataccagac
    10801 ccaagttacg ccttctgagc gataacgaga gcgagcagta aatagttcca taatattcct
    10861 cctttacgtt gttgtcatca gttgataatt ttcttttaga aatttcagtt catgttccat
    10921 cttttctgtt ggtttacctg tgttttgaat cattttcaga tactctgtat tcatgatttt
    10981 gtctgcctct tctacataag caagcgagtt tgagacttga taaagaagcc atcggacagt
    11041 tcggtcaatg gaataaggtt ctggtttgat actcaatttg agcggttcag cagaaccaaa
    11101 catctcttgc catttctggt ctgggatata ggctccgtat ttaccaacac cgttataaac
    11161 catcatttct tggttgatta agccacgggc tagatttcct aattcttgcc cctctacaaa
    11221 atgttctacc aagagatgag cttttccttg agagaggcgg atctcatacc gattccaaac
    11281 cccaaatatt tcaagtgctt cttccacgct aataccttct ttttgagcaa attcataacg
    11341 cttttcgtag aagttgaaaa acatgttaga cttgcgagag ccaaagtaga gggaaattcc
    11401 ttggcgttcc tcttcatcag atgaggtact taaattccct cctccaatat gactccatac
    11461 tttcaagcgg tcaaaggtca catagttttg ataaaccttg ttaatcatat ctgagaggtg
    11521 gaagtggtta gcttcctcag atttgccacg atagagttca tctagggcta ggtcgatacg
    11581 tgtaactttc atatcatttc gttcataaag cattttagct agaaagtctt gccatgtgat
    11641 accctcacgt tctaaaatca attccatttg acgacagcct tgtcccgaga gttgaagtgt
    11701 gacttggtaa ttatcacgat cctccttgtc aaagtaatca aagagccaaa tgtcacctcg
    11761 tttgtaaaga tgattatagg tcatcaaact ggtttcctga gaagtaaagt cctgaaagtt
    11821 aacatagaga taggtctcta tgaaatcttt gatatggtgc acattcttaa aagtgatacg
    11881 caaatagtca atcatcaaac gtaatggatg ggagctatcg ctaaaggaat agcccaaatg
    11941 tgttttaatt tccttgaact tttccaaggt aaattctcgt ctgcctattt cataagattt
    12001 taggcttgag agactcatct gagttaattc cgcaaattcc ttttgtttta agccgagact
    12061 ggctctaaat ttccttaatg ttttaccatc tatgggaatt cctcctttct tttttcaaaa
    12121 ggtgtacagt ttttagacaa aaagtgtaca ggggtgaaag ttcgtaatcc cttgacccac
    12181 aaggactagg gaggtgtcac ttcgctgatt tttcaaatct ctacccccct attagaaatt
    12241 gggggtagta aaaacgatta gaggtaacta ccgcctcacc cgccctgctc tgttcgcttc
    12301 gcctacggct cgctcacagg ggcggggcgt tagctccctc caatcgctgt ttcacttaag
    12361 ggctgaaaga aagcctccac agcgtcttta taggtcaagt tattcttgtc catagaatca
    12421 aaaataacct ctaggtcata gaggtcatca ggactaagca tgactttgcc atcttgtcta
    12481 ttaaagctac ggtgattatc cttttcaatc aggttgacaa gcttcttaat ctggtcataa
    12541 gttttgtcca gctcttgctt ggcttctgcc atggtgtagg aatcaggttg agccttttct
    12601 tctaactctt ccgtgattgc agaagtaggc acgttttgaa ggcaaaaaat agctgatgaa
    12661 gactcgtgcg gtgtcattgc cataaaggct tctttgaaag aaaagccctt atcaaatggc
    12721 acgttaggag agaagaactc ccttgcaatt tccccagcgt ttgcgatata gccacgccca
    12781 atgactttct taccgtcaat ctcatcaatg tacttaaact ctttattctt attagcgtcc
    12841 ccgtacatca tggtgtagcc tgtgtcttcc aagtgtccga ctgagaggcg tttcatgaat
    12901 tggtcacgaa ggctggtctt gatatactca ccatcaggac gttgcattgc catgatgaca
    12961 aagataccag cttgacgggc ttctagaatg agttgtgtca agtattgatt gacctgttgc
    13021 tggagctgat agttaccttc tagctttgcc atgagcgctg cccactcatc aaagaagatg
    13081 aatttagggc gtaagccaaa ctgagagaag ttcataccag ccaaaaagtt aggctgactt
    13141 ttcatgtagc ggtaacgctc ttccatttcc tcgacattgc ttttgagaca ttccacaatt
    13201 ttctctttag tgatgaagac gtgtccttta aagattggca cgtccgcaaa agacgatagg
    13261 tcagattgtt tcgggtcaca aatatcaata acggcaattg gagccagccc ataaagaaga
    13321 atcatgagga ggacagtttt acccccacca gtacctccac caatcagtaa gtgtggttgc
    13381 ttgacgaaat cccaatagac atctttcatg agtctcagac cttgcttggt catcttgaca
    13441 tcagataaat tgagacgacc tgcaaattgg tcaatggcaa tggtgtaggt cacgtagcct
    13501 ttagagaatt tcttgcctgt aaaatcccca tcgtgttgga tttcaagcgt gttacctagc
    13561 gttaagaact tgtcttgaaa cttgtttcct tgaaggataa aagaggcgtt aaggtcatac
    13621 ttactttgtt tgagatagac tttgggaagg ataatcttct ctttggtctg gttatcacgc
    13681 ttgattttct tagagaggta atagccattt tccaagagaa agttagccat aatccgtagg
    13741 ttatctaact tagaaaaggc tagtaagtga gcgtagaggt agcgctgaat cagaaagctc
    13801 actatcaaac cgcccagcag tagacttcct gttgttagtc catagtagag tggctgagtg
    13861 agcaggtctt cgtaattgag accaagcaaa aagccacatc ccaagagata tggcaaataa
    13921 agaagggcaa aggttatgcc cttgatatgc ttatggtatt ttctgactcg tcttcctcgc
    13981 ttatgccaga ggctcattct ttagactttc cttggtcagc tttcggtgca ggagcatttt
    14041 tcttggtaat gccttgtgca aagagtttat aaactccgcc tgagacagag gagtaggtaa
    14101 cgatgatacc tgagagttcg acttcgtcac cgaatttcaa accaagagct tcaatttcac
    14161 ttggcaacat gccaataatg gagaactctt cggtaccgtg ttgagtgctt gatttaatcg
    14221 caaccttagt tgagaggatt tcccctgtag gaatttgtgg gtaggtgcca tcttggttac
    14281 ggggctgtgt ggtatcattt tcatactttt gttctacttc attaatccca cgccaagtca
    14341 atttaccaaa gacttcgtca atcttaagag caggagtaat atccaagtaa cgcttatctg
    14401 taatatctac tttatcaaat ttcaatccaa cttttgccat attattgttc ctcgtatctt
    14461 tctattttgt attagggatt attatttctt aacgacaatc ttttcagcaa atacattaag
    14521 agctggtgcc atgtcacgtc cgttaatgtt atcagggtag aagatgggat taaccaattc
    14581 aacctcagcg tcttcttcaa agacctcagc cgtagcaggt gtaatcacgt aaaattgtaa
    14641 gtgcttttca ttgacgactt cgtgacgttg aaactgtcct tgtttcccaa aaacagtacg
    14701 tggggcagtt ccttgttttt cgtagatggc agtgccaata aaatcaggat tcattttaag
    14761 tgtttcttta atcatagtat tattcctttc aaagtcataa aaaaatcaag ccatagcttg
    14821 atgagagtga taatattgtg taattaaacg gcgatagtag ttaccataaa aagttaattc
    14881 cccttgtggg taatgtgctt tttttaaaca ctttaattga acgcttaagt gttccaaagt
    14941 atctacatac aagagcctca gtaaatgttc atcatgacga tagacacctg atgaaaaggt
    15001 aaaattgata taaatctgtt ttagtttctg ttcacaatag gtcataatgt cctttctaaa
    15061 tagtaaaagc tactagcaga gggtaaagtc agactagtag cttatgtgtt aagagatgaa
    15121 actcgctcga agatttccag tcctgtcatg gcaaggcttc atcaatggtt atttggttga
    15181 gaaaagagga actcctttct cacggtggca acgtttagca aggtgcattg cgtcaattac
    15241 catcgctgtc ccagccaacc cgctagaccg atactcgtat ccagaagatt ctcttatgcc
    15301 ttttggcaaa gccagttcac tttactattc ggaaaagtgc taaagtccga tatgcgtgtg
    15361 ggtatctccc aaatagagaa tccaactcca accagcatac ggacttgaca tttttgtcat
    15421 gtgtgataca ataaaggtac gaagtttatt gtgtgtttgt cggtcagtca tctggttgtc
    15481 agacgcacat tttttattaa agatttcaag gaacattgtt tggtttcaga taatgcttat
    15541 tattttttga aacctgtata acc
//
LOCUS       DBNFCX010000050        15157 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.050, whole genome shotgun sequence.
ACCESSION   DBNFCX010000050 DBNFCX010000000
VERSION     DBNFCX010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 15157)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15157)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15157
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.050"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..631
                     /locus_tag="AC1PJC_001395"
     CDS             <1..631
                     /locus_tag="AC1PJC_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005589489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HIP6620381.1"
                     /translation="YEVVTAFDGREALEVFEAEFPDIVILDLMLPELDGLEVARTIRK
                     TSNVPILMLSAKDSEFDKVIGLEIGADDYVTKPFSNRELQARVKALLRRSELAETQTN
                     IESTGTPELVIGDLVILPDAFVAKKHGKELELTHREFELLHHLAKHLGQVMTREHLLE
                     TVWGYDYFGDVRTVDVTIRRLREKIEDAPSRPEYILTRRGVGYFIKGND"
     gene            624..1973
                     /gene="vicK"
                     /locus_tag="AC1PJC_001396"
     CDS             624..1973
                     /gene="vicK"
                     /locus_tag="AC1PJC_001396"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall metabolism sensor histidine kinase
                     VicK"
                     /protein_id="HIP6620382.1"
                     /translation="MINQLRYLMTTAEFWFVVILIGFLIALTVLLIENYRDNKQIKQL
                     NQKVNALIEGNYADVLDMRGSPEITDMANSLNDLSEVIRLTHDNLEQEKTRLTSILSY
                     MSDGVIATDRIGRIIMINDMAQKQLGLSSQKQEQYHLLEVLDLSDRYTLRDLLAQTPE
                     IVIDHTNENEEFLTLRANFATIRSESGLISGLVVVLHDMTEQAKEERERRLFVSNVSH
                     ELRTPLTSVKSYLEALDEGALTESVAPSFVKVSLDETNRMMRMITDLLSLSRIDNQVG
                     QIDVELINFTAFVTFILNRFDQMKNADSDKVYTIVRDYQISPIWVEIDTDKMTQVLDN
                     ILNNAIKYSPDGGTITFSMKTTDSQLIVSVSDEGLGIPKADLPRIFDRFYRVDKARSR
                     AQGGTGLGLAIAKEIVKQHKGFIWAKSEYGHGSTFTIVLPYSKDIALDEWDDSDEEE"
     gene            1980..2783
                     /locus_tag="AC1PJC_001397"
     CDS             1980..2783
                     /locus_tag="AC1PJC_001397"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HIP6620383.1"
                     /translation="MIGKGFNYSILASGSSGNCFFLETDKKKILVDAGLSGKKITSLL
                     AEIDRKPEDIDAILVTHEHSDHIHGIGVLARKYGMDIYANELTWQAMESKLGKIDVAQ
                     KHIFELGAMKTFGDLDIESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMVGIV
                     ENADAYLIESNHDIEILRSGSYSWNLKQRILSDKGHLCNEDGADAMIRSLGNRTKKIY
                     LGHLSKENNIKELAHMTMVNQLTQADLGVGVDFQVYDTSPDTATPLTKI"
     gene            3041..4426
                     /gene="vga(F)"
                     /locus_tag="AC1PJC_001398"
                     /gene_synonym="srpA"
     CDS             3041..4426
                     /gene="vga(F)"
                     /locus_tag="AC1PJC_001398"
                     /gene_synonym="srpA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F type ribosomal protection protein Vga(F)"
                     /protein_id="HIP6620384.1"
                     /translation="MEMIKCIQLEKEFAGRSLFTIQQLSLQAGQKVGLVGNNGVGKST
                     FLKILLGLDRDFVGQIEVKADWAYVPQLQERSSLSGGEQVWKSIQEAFAQRPQLLILD
                     EPTANLDQEHQEKLIKQIKRYRGSLLVVSHDRHFLNQIASHIWHLEEGSIQVYTGNYE
                     AFVESRRARREGQQEAYEAYQKKVAQLKKAQKERQVKAQKMGKRKKGVSSSEWKVSAM
                     MGSYDSQSKSMAKSAKQLEKRIERLEKVSQPRREAHIKMESKGALDTDLHRLFLLQAG
                     QVFVDEVYLFDFPQIGMTFGEKLALVGANGSGKTSFVRKLLRKELAGYYNPKLKIAYF
                     AQDLINLDEEKTAFENVSCTSLQDKMTILNLLGMLGLSYDKAQQKVANLSGGERVRLS
                     LAKVLLADANLLILDEPTNFLDMAAIEALETFLKEYEGSVLLVSHDQQFVETSVHSQW
                     EIVQACLVKKS"
     gene            4518..6587
                     /gene="pbp2b"
                     /locus_tag="AC1PJC_001399"
     CDS             4518..6587
                     /gene="pbp2b"
                     /locus_tag="AC1PJC_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein PBP2B"
                     /protein_id="HIP6620385.1"
                     /translation="MKKRKNKPLEHDGNFISLRLNILFSIVIFLFLVLILRLADMQII
                     NHDFYSNKLSTASQKIISNGSIRGQIYDAQGKPLVENEIQQVVSFTRSNKMSAQEMKE
                     VANKLLQWVNVSDVTITQRDKADYYLADEEVYRQVVEALPEDKKYDSDGNYLSESTIY
                     SNAVDSIPAEALQYSEQDSKAIELFKQMNGATYFSTVNLVTDTLTAEQVAHIVANESQ
                     LPGISTTNNWQRNILPTSLSSVIGTVTSEQAGLPAEDAEYYLSKGYSPNDRVGTAYLE
                     KQYEEVLQGQREKKEINLDRNGNVESIKTIQEGQQGNNIKLTIDLAFQDGVNAILKKY
                     FESELSTGSALYSEGVYAVALNPSTGAVLAMSGYSHEKGSSTITEDALGTITSVFTPG
                     SIVKGATISSGWENGIISGNQVLLDEPIYFAGSAPITSWWAYGSFNIDATEALEYSSN
                     VYMVKIALGLLGQTYSANMYLNDGDTLTNAMTKLRSTFAEYGLGASTGIDLPLESTGF
                     LPEEYSTANFIMNAFGQFDNYTPMQMAQYVATVANNGKRISPHLVEGIYGNNPQGGLG
                     DLIETVSGKEMNQVNISADEMALLRQGFYQLVNGGGRFNTGSAIGRGAAVTISAKTGT
                     AETYTTTPSGEVVTAVNTNVVAYAPSDNPQIAVAVVLPNLTNENSTTKAITTEIINLY
                     NSLYPMN"
     gene            6596..7192
                     /gene="recR"
                     /locus_tag="AC1PJC_001400"
     CDS             6596..7192
                     /gene="recR"
                     /locus_tag="AC1PJC_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002896112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HIP6620386.1"
                     /translation="MLYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMEDDVVNEFA
                     KNLLAAKRDLSYCSICGNLTDQDPCAICQDSTRDQSTILIVEDSRDVTALENIQEYHG
                     LYHVLHGLISPMNGIGPDDINLKTLLTRLMDNEVTEVIVATNATADGEATSMYISRVL
                     KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL"
     gene            7297..8343
                     /locus_tag="AC1PJC_001401"
     CDS             7297..8343
                     /locus_tag="AC1PJC_001401"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HIP6620387.1"
                     /translation="MSKETLILLYGGRSAEREVSVLSAESVMRAINYDKFFVKTYFIT
                     QTGDFIKTQEFSQTPSADEKLMTNATIVEEQKIRPSDIYEEKAVVFPVLHGPMGEDGS
                     IQGFLEVLRMPYVGTNILSSSVAMDKITTKRVLESAGISQVPYVAVIEGETIDDKIAE
                     IEEKLTYPVFVKPANMGSSVGISKAEDLAGLRKALDLAFKYDSRVLVEQGVNAREIEV
                     GLLGNADVKTTLPGEVVKDVAFYDYDAKYIDNKITMEIPAKIDESIMDTMRDNAAKAF
                     RAIGGCGLSRCDFFLTEDGDIFLNELNTMPGFTQWSMYPLLWDNMGLAYPDLIEELVR
                     LAKEMFEKRESHLI"
     gene            8447..8827
                     /locus_tag="AC1PJC_001402"
     CDS             8447..8827
                     /locus_tag="AC1PJC_001402"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HIP6620388.1"
                     /translation="MYQTTVKGEGLFQAVSQGYGEPVHTFGVTEQGETPVSLVNIGLA
                     ACVTMCVQGYYASQEGNKTMPVQVESRLDNQHFEVLIGIGESVSAQKQKEILAYVEKK
                     CKVKDLLREDLKFETSFYVLESVE"
     gene            8828..9904
                     /locus_tag="AC1PJC_001403"
     CDS             8828..9904
                     /locus_tag="AC1PJC_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIP6620389.1"
                     /translation="MFLAIEEMRQNKLRYGLILGLLVLIAYLVFFLTGLAYGLMQENR
                     TAVDKWQADYVLLNSESNRLITASKIDTALLDRVDAGDKALIRQQAGVAYVDENATSD
                     EKEKVNIFAVESDSFIVPNIVEGRLYEKTGEVVVDKTLSEVEGFGLGDEVYLSGTDEK
                     VTIVGYTDNAYFGVAPVVYMDITAFAELMQADKQQAATSNLASAIVVRGDVASLPNEL
                     EKVAIADFIENLPGYKAQNMTFGFMIGFLIVISAIVIGIFIFVLTTQKSPIFGLMKIQ
                     GLSNGYISGSVLAQTFLLAGVGTVLGLAGTYLSSLVLPSAVPFENNWIFYIAIGLALV
                     VFALLGASFSVGSIFKVDPLRNLS"
     gene            9914..10582
                     /locus_tag="AC1PJC_001404"
     CDS             9914..10582
                     /locus_tag="AC1PJC_001404"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6620390.1"
                     /translation="MKTLIFENISKTFQDGSQTITALKPTNFSIEEGEFVAIIGPSGS
                     GKSTFLTLAGGLQTPTTGRVLINQSDYSDLPEKKRAKLRYKDIGFVLQASNLIPFLTV
                     EKQLTLVDKVNKKVEPSKRNELLSELGVDHLKNKFPKDLSGGERQRVAIARALYNDPA
                     LILADEPTASLDSNRAFEVVELLAKEAKERNKSIIMVTHDQRMIEKCDKVYEMKDGVL
                     TQVR"
     gene            10637..11998
                     /locus_tag="AC1PJC_001405"
     CDS             10637..11998
                     /locus_tag="AC1PJC_001405"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HIP6620391.1"
                     /translation="MKLTLHEVAQVLGAKNDISLYPDRALNKVEFDSRLITEGDLFVP
                     LKGARDGHDFIPVAFENGCAVTLSEASLDVPHILVDDCLAALQQLAAYYLEKTGVEVI
                     AVTGSNGKTTTKDMIHDVLATTYKTYKTQGNYNNEIGLPYTVLHMPDDTEKLVLEMGQ
                     DHLGDIHLLSEIAKPSLSVITLFGEAHLEFFGSREEIAKGKLQIADGMEPGSKLLIPA
                     DPIADKLLPSHVDLIRFGEQGDLQVTSLVESKDSLIFTVNFMDGDIFLPVTGKYNATN
                     AMVASYVGKTLGVSNEGIKSALASLNLTRNRTEWKKAANGADILSDVYNANPTAMRLI
                     LETFSSIPANDGGKKIAVLADMKELGSQSVDLHNQMILSLSPDVLDTVVFYGQDIEGL
                     AQLASQMFPIGKVYFFRKNTEQDQFEDLVKQVRESLGKEDQILFKGSNSMNLGKVVEA
                     IEK"
     gene            12089..12787
                     /locus_tag="AC1PJC_001406"
     CDS             12089..12787
                     /locus_tag="AC1PJC_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02206 family membrane protein"
                     /protein_id="HIP6620392.1"
                     /translation="MSDFFSNQISEAPNLNVLEHLFLMIIWFFMLHLCFRCYQKRWFH
                     IVFWWLQFIQIVSLYTWYIVADFPLSESLPFYHCRLAMLFILWAKPGPLKRYFAYLGL
                     FGSLAAFIHPVFDPFAFPHLTFFTFVIGHYALTVNCMLYLLSDLEGEMLKGKEVVKYT
                     LIMNMLILGVALLTGGNYGFLRQAPLVNTNNLPLNFFLVTCLLCFSILSIQAMLIAYL
                     KKESKQMNSQILKK"
     gene            complement(12818..15154)
                     /locus_tag="AC1PJC_001407"
     CDS             complement(12818..15154)
                     /locus_tag="AC1PJC_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015662 - P-type ion transporter activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation-translocating P-type ATPase"
                     /protein_id="HIP6620393.1"
                     /translation="MNKQIKGLSTKEVQERIQNQQTNHFKTKTSASNWEIFRRNVFTS
                     FNALNFAIFLALLAVQAWSNLFFFGVIVLNAVSGMLTEWRARRMIDKLNLMNKDFIRV
                     VRDSETISLAPEDIVLDDVLLLSAGEQVPSDAIVLEGIAEANEAMLTGESDLIVKNTG
                     AELLSGSYLVSGQIYAKVIHVGAENYANKLMLEAKTHKPIVSRILYNMDKIAKFTGKI
                     IIPFGLALFLEAFFIKLLPLKDSVITSSTALLGMLPKGIALLTITSLLTAVIKLGMKN
                     VLVQEMYSVETLARVDVLCLDKTGTITQGKMTVENLLPLNNHYSFDTIQQILATYIQT
                     SEDTNSTAQAIRKEYGDLEHHYKASHIIPFSSDRKWGAMTIENIGHIFLGAPEMLLTQ
                     NPPSVSEAQARGSRVLILALSQQSLPSSQNQLPENIEPLALLEIADPIREDAAETLAY
                     LRSQEVTLKIISGDNPVTVSHIAREAGFADYDSYIDCSKVDDEELIARAETTAIFGRV
                     SPHQKKLLIQTLKAQGHTTAMTGDGVNDILALREADCSIVMAEGDPATRQIANLVLLD
                     SEFRDIPEILFEGRRVVNNISHIAPIFLIKTIYSFLLGLICIASIALGKAEYLLVFPF
                     IQVQMTLIGQFVEGFPPFILTFERNIRPVEKHFLRKSLLLALPNALMVVLSVLIFHLM
                     QIFGYLNLHDMQTLSYYVLGSTGLLAVIRACLPLTKARLALIIYSVFGFFISSHFLHG
                     LIEIHPLNSHTLPIYSGSMLIFIPVFFWISHKQGAFKN"
BASE COUNT         4462 a         2704 c         3535 g         4456 t
ORIGIN      
        1 atatgaagtt gtgacagctt tcgatggacg tgaagccttg gaagtatttg aggctgagtt
       61 tcctgacatt gtcattttgg acttgatgct gccagaattg gacggactag aggttgctcg
      121 aacgattcgt aagaccagca atgttccaat cttgatgtta tctgctaaag atagcgaatt
      181 tgataaggtt atcgggcttg aaatcggggc ggatgattat gtgaccaagc ccttctctaa
      241 tcgcgaattg caggcgcgtg ttaaggctct tcttcgtcgt agtgaattgg cagagacgca
      301 gacaaatatt gagtcaacag gaactccaga gttggtgatt ggcgatttgg tcattctgcc
      361 tgatgcgttt gtcgctaaga agcatggaaa agagctggag ctcacccatc gtgagtttga
      421 attgctccac catctggcca aacacttagg tcaggttatg actcgagaac atctattgga
      481 aacagtttgg ggttatgatt actttggtga tgtccgcacg gtggatgtaa caatccgtcg
      541 tctgcgtgag aaaattgaag atgcaccaag cagaccagaa tacattctta ctcgtcgcgg
      601 agtgggatat tttataaaag gaaatgatta atcaattacg ttatttaatg accacggcag
      661 aattttggtt tgttgtcatt ttgattggct ttctaattgc tctgacggtc cttttgattg
      721 aaaactatcg ggataataag caaattaaac aactcaatca aaaagtcaat gccttaattg
      781 aggggaatta tgcagatgtg ttagacatga ggggaagtcc tgaaatcaca gatatggcga
      841 attctcttaa tgatctgtcc gaggtcatcc gcttaactca tgataattta gaacaagaaa
      901 agacgcgtct gacttccatc ctgtcctata tgagtgacgg tgttattgct acagaccgta
      961 tcggacggat catcatgatt aacgatatgg cccagaaaca gttggggctt tctagccaaa
     1021 agcaggagca gtatcacctg ctcgaggttt tagatttatc agaccgttat acattgagag
     1081 atttgttggc tcagacacct gagattgtga ttgatcacac caatgaaaac gaagaatttt
     1141 tgactttacg tgctaatttt gccacgattc gtagtgagag tggtctgatt tctggcttgg
     1201 ttgtcgtctt gcatgatatg actgagcagg ccaaggaaga acgggaacgt aggctgtttg
     1261 tgtcaaatgt gagtcatgaa ttgcgtacgc cattgacttc cgtcaaatcc tatctagagg
     1321 ctctggatga gggagcgctg acggagtctg ttgcaccgag ttttgttaag gtatccttag
     1381 atgagaccaa ccgcatgatg cggatgatta cagatctcct aagcttatcg cgtattgata
     1441 atcaagttgg tcagatagat gttgaactga taaactttac tgcttttgtg acctttattc
     1501 ttaaccgttt tgaccaaatg aaaaatgctg attctgataa ggtctatacg attgttcgtg
     1561 actatcaaat cagtcctatt tgggttgaga ttgatacaga taagatgact caggttttgg
     1621 ataatatctt aaataatgcc attaaatatt cgccagatgg cgggacaatt accttcagca
     1681 tgaagaccac agatagtcag ttgattgtat ccgtctcaga cgaaggtctg gggattccga
     1741 aagcagattt acctagaatt tttgaccgat tttatcgcgt ggacaaggca cgatctcgtg
     1801 ctcaaggcgg tacaggtctt ggtttagcta ttgcaaaaga aatcgtgaaa caacataagg
     1861 gctttatctg ggctaaaagc gaatatggtc atggctcaac gtttacaatt gtcttgccgt
     1921 acagcaagga catcgcacta gatgagtggg atgattcaga tgaggaagaa taggagaata
     1981 tgatcggaaa aggttttaat tatagtattt tagcttcggg gtccagcggg aattgttttt
     2041 tcttagaaac agataaaaag aaaatcttag tggatgctgg cttatcaggg aaaaagatta
     2101 ccagtctttt ggcggaaatt gatcgaaagc ctgaggatat tgatgctatc ctggtaacgc
     2161 atgaacatag cgatcacatc catggtatcg gtgttttagc acgtaagtat gggatggata
     2221 tttatgccaa tgaattgacc tggcaggcta tggagagcaa attgggcaag attgatgtgg
     2281 ctcaaaaaca tatcttcgaa ttgggtgcta tgaagacttt tggcgaccta gatattgagt
     2341 catttggtgt cagtcatgat gcggcctgtc cgcaatttta ccgttttatg aaggatgaca
     2401 aatcctttgt tatgttgacg gatacaggct atgtcagtga ccgcatggtt ggaattgtag
     2461 aaaatgccga tgcttatttg attgaatcga accatgatat tgaaattttg cgctcaggtt
     2521 catattcatg gaatttgaag caacggattt tgtcagataa gggccacctt tgtaacgaag
     2581 acggtgctga cgccatgatt cgctcgttgg gaaatcggac aaaaaagatt tacctagggc
     2641 atttgtcaaa ggaaaacaat atcaaggaat tggctcacat gaccatggtt aatcaattga
     2701 ctcaggctga tttaggagtt ggagtggatt tccaagtcta tgacacatcg ccagatacag
     2761 cgactccctt gaccaagatt tgacaaattc attgaacttg tttagaataa atatataaaa
     2821 tacgtgaggt gaagttacat gaataattaa gctacttatt agtcattctt aaaaattgta
     2881 gtgaggttat attaaccgag aatacaaggg ataagactgc tcataagggc ttactattca
     2941 tgtgactttt tccataggga aaggtcatgt tttgcatggc ttttttcttg tgtcattttt
     3001 tgaagaatag aagccctttt tgtgaagaaa agaggtctat atggaaatga taaaatgtat
     3061 tcaattagag aaggaatttg cgggacgtag tttgtttaca atccagcagt tgagccttca
     3121 agctggtcaa aaggttggtt tggttggaaa taatggtgtt ggcaagtcta cttttttgaa
     3181 aatcttacta ggactggata gggattttgt cggtcaaatt gaggtaaaag cagactgggc
     3241 ctatgtaccc cagttacagg aaaggagctc gctttcaggt ggggaacagg tttggaagtc
     3301 tattcaagag gcttttgccc aaagaccgca gttgttaatc ctggatgagc cgacagctaa
     3361 tctagaccaa gaacaccagg aaaagctaat caaacaaatc aaacgctatc gaggtagtct
     3421 actagttgtt agtcatgatc ggcattttct caatcaaata gccagtcaca tttggcattt
     3481 agaagaagga agtattcagg tctatacagg gaattatgag gcgtttgtag aaagtcgccg
     3541 ggctaggcga gaagggcagc aggaggccta tgaagcctat cagaaaaaag tcgctcaact
     3601 aaaaaaagcc caaaaagagc gtcaggtcaa ggctcagaag atggggaaga gaaagaaagg
     3661 tgtttcatcg tctgagtgga aagtcagtgc tatgatgggt tcctatgata gtcaatccaa
     3721 gtcaatggct aagtctgcta aacagttaga gaaaaggatt gagaggttgg aaaaggttag
     3781 tcagcccaga agggaggctc atattaaaat ggaatcaaaa ggggccttag atactgattt
     3841 acacagacta tttcttttgc aagcaggtca agtttttgtg gatgaagtgt atctatttga
     3901 tttccctcag atagggatga cgtttggaga gaagttagcc ttagtggggg cgaatggttc
     3961 tggaaagacc agttttgtcc gaaaattatt aaggaaagaa ttggcaggct attataatcc
     4021 taagttaaaa attgcttatt ttgcacagga tttgataaac cttgatgaag aaaagactgc
     4081 ttttgaaaat gttagttgta cctctcttca agataagatg acgattctca atttattagg
     4141 tatgttagga ctttcttacg ataaggctca gcagaaggta gcaaatctgt ctggtggtga
     4201 gcgtgttcgt ctctccttag ctaaggtatt gttggcggat gcaaatcttt tgatattaga
     4261 tgaaccgaca aattttctag atatggcagc tattgaagct ttggaaacat tcttgaagga
     4321 atatgaagga agtgtcctct tggtttccca tgatcaacag tttgtggaaa catctgttca
     4381 cagtcaatgg gagatagtgc aagcttgtct cgtgaagaaa tcataagaaa atattttctg
     4441 aaaaggaggc tctgtctaaa aaatattttt tgcctgtggt ataataagaa ggatatttct
     4501 agaatgaggt ctttgaagtg aaaaaaagaa agaacaagcc tttggaacac gatgggaatt
     4561 ttatttccct tcgtttaaat attttatttt ctatcgtgat tttccttttc ctagttttga
     4621 tattgcgtct ggcagatatg cagattatca atcatgattt ttatagtaat aagctgtcta
     4681 ctgccagtca gaaaatcatt agcaatggct ctatccgtgg gcagatttac gatgcgcaag
     4741 gaaaaccttt ggttgaaaac gagattcagc aggttgtctc cttcacacgt tccaacaaga
     4801 tgtctgcaca ggaaatgaaa gaagtagcta acaaactctt gcagtgggtc aatgtgtcgg
     4861 acgtaacaat tactcaacgt gacaaggctg attattattt ggcagatgaa gaagtttatc
     4921 gtcaggtagt cgaggccttg ccagaagata aaaaatacga ttctgatggc aactacctga
     4981 gtgaatcgac aatttattct aatgcggttg atagtatccc tgctgaagca ttgcaatatt
     5041 ctgagcaaga tagcaaggcg attgagctat ttaagcagat gaatggagct acttacttct
     5101 ctactgttaa tttggtaaca gatactctaa ctgctgaaca ggttgctcat atcgtagcca
     5161 atgaaagtca acttccaggt atttctacga ccaataactg gcagcggaat atcctaccga
     5221 cctccttgag ttcggttatt ggaacggtaa caagtgaaca ggcaggtttg ccagccgaag
     5281 atgcagagta ttatttgtct aaaggctatt cgccaaatga ccgagtggga actgcctacc
     5341 tcgaaaagca gtatgaagaa gtcctacaag gacaacgtga gaaaaaggaa atcaatctgg
     5401 accgaaatgg taatgtggag agtattaaga ccatccaaga gggtcagcaa ggaaacaata
     5461 ttaaactaac cattgatttg gcctttcaag atggtgtcaa tgcgattcta aaaaaatatt
     5521 ttgagagtga gttgtcaaca ggaagtgcac tttattcaga aggtgtttat gcagttgcat
     5581 taaatccttc tacaggtgca gtgcttgcta tgtcaggata tagtcacgaa aaaggctcaa
     5641 gtaccattac cgaagatgct cttggcacca tcacaagcgt ctttacacca ggttctattg
     5701 tcaagggggc aactatttca tctggttggg agaatggcat tatctcagga aatcaggtat
     5761 tattagatga accgatttat tttgcaggtt cagcaccaat tacatcttgg tgggcctatg
     5821 gtagttttaa tattgatgcg acagaggctc tggaatattc ttctaacgtc tacatggtta
     5881 agattgcttt gggactactt ggtcagacct actcagctaa catgtatttg aatgatggcg
     5941 atacattgac aaatgccatg actaagcttc gttcgacttt tgcagagtat ggtttaggtg
     6001 cgtcaacagg aattgactta ccacttgaat caacaggttt cttaccagaa gaatattcca
     6061 ccgcaaactt tattatgaat gcatttggac agtttgataa ctatacaccg atgcagatgg
     6121 ctcaatatgt agcgacagta gcaaataatg gaaaaaggat ttctcctcat cttgtagaag
     6181 gtatctatgg aaataatccc caaggtggat tgggagattt gattgaaaca gtttctggta
     6241 aagagatgaa tcaagtcaat atttcagctg atgaaatggc tctccttcgt caaggatttt
     6301 atcaacttgt aaatggtgga ggacgattta atacaggtag tgctatcggt cgtggtgcgg
     6361 ccgtgaccat cagtgccaag actggtactg ccgaaactta tactacaact ccttcaggtg
     6421 aagtagtaac tgcagtaaat accaacgttg ttgcctatgc acctagtgat aatccacaaa
     6481 tcgcagttgc agtcgtactt ccaaacttga ctaacgaaaa ttctacaaca aaagcaatta
     6541 caacagaaat cattaattta tacaattcac tttacccaat gaactaagga gaattatgct
     6601 atatcctaca cccattgcca agttgattga cagttactcc aaattaccag gaatcggtat
     6661 taagacagct acgcggctgg ccttctatac tattggcatg gaggatgatg tcgttaatga
     6721 gtttgcaaaa aatttattgg cagccaagcg agacctatct tattgctcta tttgtggtaa
     6781 tttgacagat caggacccct gtgccatttg ccaggactca acgcgagacc aatctactat
     6841 tttgattgta gaggatagtc gagatgttac agctttggaa aatattcaag aataccacgg
     6901 tctttatcat gtcttgcatg gcttgatttc ccccatgaat ggtatcggac cagatgatat
     6961 taatttgaaa accctcctca ctcgcctgat ggataatgag gttacagaag ttattgtggc
     7021 gaccaatgca acagcagatg gagaggctac atctatgtat atctcgcgtg tcctcaaacc
     7081 tgcaggaatc aaagtaaccc gactagctcg tggcttagcg gtaggcagtg atattgaata
     7141 tgcagatgaa gtgaccctgt tgagggctat tgaaaaccgc acagagctat agctgttctg
     7201 tagttagata cgttcctaat tttaagatag gatagatatg atttgttaaa ttatgctata
     7261 ctaagagtaa tagcgttgat acaggaagga aaatatatgt caaaagaaac cttgatttta
     7321 ctatatggtg ggcgttctgc agagcgtgag gtatccgttc tgtctgccga aagcgtcatg
     7381 cgtgccatca attatgataa attttttgtc aaaacctatt tcatcacaca aactggggac
     7441 tttattaaga cgcaagagtt ttctcaaaca ccgtctgccg atgaaaaact catgacaaac
     7501 gcgacaattg ttgaagagca aaaaatccgt ccgagcgata tttatgaaga aaaggcagtc
     7561 gttttccctg ttcttcatgg accaatggga gaagacgggt caattcaagg cttcttggaa
     7621 gtacttcgta tgccgtacgt gggtaccaac atcttgtctt ccagcgttgc catggacaag
     7681 attacaacta agcgcgttct tgaatcagca ggaatctccc aagtacctta tgtggcagtt
     7741 atcgagggtg aaactatcga cgataagatt gcagagattg aagaaaaatt gacttatccg
     7801 gtctttgtaa aaccagctaa tatgggatca agtgtcggta tctctaaggc agaggattta
     7861 gctggcttgc gtaaggcgct tgatctggct ttcaagtatg acagccgtgt cctcgttgag
     7921 cagggggtta atgcgcgtga gattgaggtt ggtcttttgg gaaatgctga cgtgaaaacg
     7981 acacttcctg gtgaagtagt caaagacgtt gctttttatg actacgatgc caaatacatc
     8041 gacaacaaaa tcaccatgga aattccagct aagattgatg agtctatcat ggataccatg
     8101 cgggacaatg ctgccaaggc cttccgtgct atcggtggtt gtggcctttc tcgctgtgat
     8161 ttcttcctga ctgaagacgg agacatcttc ctgaatgagc tcaacaccat gccaggcttt
     8221 actcagtggt ctatgtatcc actcctttgg gataatatgg gacttgctta cccagacttg
     8281 attgaagagc ttgttcgttt ggccaaggaa atgtttgaaa aacgtgaaag tcatttgatt
     8341 taatgagaat gaaaaggatt ggaaaatttc caatcttttt ctagttcaca ttcttgcaaa
     8401 gggttgcaaa aaagaataga atggtttcaa gtatgtggag gtgtttatgt atcaaacgac
     8461 ggtaaaaggg gaaggtctgt ttcaggcagt ttctcaaggt tatggagaac cagttcatac
     8521 ttttggtgta acagagcagg gagaaactcc cgtaagcctt gtgaacattg gcttagctgc
     8581 ctgtgtgacc atgtgtgtgc agggctacta tgccagccaa gaaggcaata aaaccatgcc
     8641 tgttcaggtg gagagtcgct tggacaatca gcattttgag gtgttgattg gaattggaga
     8701 gtcggtttca gcgcaaaagc agaaagagat tcttgcctat gtggaaaaga aatgtaaagt
     8761 caaagatctt ttgagggaag acttgaagtt tgagacaagt ttttatgtct tagaaagtgt
     8821 ggagtagatg tttttagcaa ttgaagaaat gcgacaaaat aagttgcgtt acggcttgat
     8881 tttgggcctg ctagtcctta tagcctactt ggtctttttc ctgacaggtt tggcttatgg
     8941 tctcatgcag gagaatagaa cagctgttga caagtggcag gcagattatg tcttacttaa
     9001 ttcagaaagc aatcgtttga taacagcttc aaaaattgat acagccttgc ttgatcgggt
     9061 ggacgctggt gacaaagcct tgattcgcca acaagctgga gttgcctatg tggatgaaaa
     9121 tgccacctca gacgaaaaag aaaaggtaaa catctttgcc gttgagtctg atagttttat
     9181 cgtcccaaat attgtagaag gtcgtttgta tgaaaaaacg ggagaagtcg ttgtagacaa
     9241 aaccttgtca gaagtagaag gttttgggct aggtgatgaa gtctatctgt cgggaactga
     9301 tgaaaaagtg accattgtag gttatacaga caatgcttat tttggagtgg cgcctgttgt
     9361 ctatatggac attacggcgt ttgcagaatt gatgcaggct gataaacaac aagctgcaac
     9421 tagtaatctt gccagtgcca ttgtcgttcg tggagatgtc gcttctctac caaatgagct
     9481 ggaaaaagtt gctattgcag actttattga aaatctgcca ggatataagg cgcaaaatat
     9541 gacttttggc tttatgatag gattcttgat tgtcatctca gccattgtta ttggtatttt
     9601 tatctttgtt ttgacaacac agaaatcacc gatttttggc ttgatgaaaa ttcaaggtct
     9661 ttcaaatggc tatatttcag gttctgtatt ggcgcaaacc ttcctacttg ctggtgtggg
     9721 aacagtcctt ggattggctg gaacttattt gtcatccctt gtcttgccaa gcgctgttcc
     9781 atttgagaat aactggatct tctatatagc aatcggtttg gctctggttg tatttgccct
     9841 attgggtgct agtttctctg taggttctat ctttaaggtg gatccattac gaaatttatc
     9901 ttaggaggtt gttatgaaaa cacttatttt tgaaaatatt agtaagacct tccaagatgg
     9961 tagtcaaacc attacggctc ttaaaccaac aaattttagc attgaagaag gcgaatttgt
    10021 tgccatcatt ggaccatctg gttctgggaa gtcaacattt ttgaccttgg caggtggttt
    10081 acaaacaccg acaacgggtc gtgttttaat caatcagtcg gactattctg atttacctga
    10141 gaaaaaacgt gccaaattgc gctataagga cattggtttt gtcttgcagg cttccaattt
    10201 gattccattt ttaacagtcg aaaaacaatt aaccttggtt gataaggtca ataagaaagt
    10261 tgaaccgagc aagcgaaacg aactcctatc tgaattgggt gtggaccatc tcaaaaacaa
    10321 gttccctaag gatttgtcag gcggagaacg gcagcgtgta gctattgccc gtgcacttta
    10381 taacgatcca gctttgattc tagctgatga accaacagcc agtctagaca gtaatcgcgc
    10441 ttttgaagtg gttgagttat tagctaagga agccaaagag cggaacaaat ccattatcat
    10501 ggtaacgcat gaccagcgca tgattgaaaa atgcgacaag gtttatgaga tgaaagatgg
    10561 tgtcctcact caagttcgat aaaaagtggt ataatagaaa gagcgaaagc tcttttttag
    10621 tttattggag aaaacaatga aattaaccct acacgaagtc gctcaggtct tgggcgcaaa
    10681 aaatgatatt agtctttatc ctgatagagc ccttaataag gtggagtttg acagtcgcct
    10741 gattacagaa ggggatcttt ttgttcccct caaaggtgcg cgtgacggtc atgactttat
    10801 tcctgttgct tttgaaaatg gctgcgcagt aaccctgtct gaagccagtc ttgatgttcc
    10861 tcacattcta gtagatgact gcttggctgc gcttcaacaa ttagcggcct actacctaga
    10921 gaaaacaggg gtagaagtca ttgctgtgac aggatcaaac ggtaagacga ccaccaagga
    10981 catgattcac gatgttctgg cgacgactta caagacttac aagactcagg gcaactacaa
    11041 caacgaaatc ggtctgccat acaccgtcct ccacatgcct gatgatacag aaaaactggt
    11101 cttggaaatg ggccaagacc acttgggcga cattcatctc ctatctgaaa ttgccaaacc
    11161 aagtctgtcg gttattactc tatttggcga agcccatttg gaatttttcg gctcacgaga
    11221 agagattgcc aaaggaaaat tacagattgc ggatggaatg gagccaggta gtaaactctt
    11281 gatcccagca gatccgattg cggataagct cttgccgagc catgtagacc tcattcgctt
    11341 cggtgagcag ggagatttgc aggtgactag tctggtcgag tcaaaagata gcctgatctt
    11401 caccgtcaac tttatggacg gcgacatttt ccttccagta acgggtaagt acaatgccac
    11461 taatgctatg gtagcaagct atgtgggcaa gaccttgggt gtgtctaatg agggcatcaa
    11521 gtcagcccta gccagtctaa acttgactcg caaccgcacc gagtggaaga aggcagcaaa
    11581 tggagcagat attctcagcg atgtctacaa tgccaaccca accgctatgc gtttgatttt
    11641 ggaaaccttc tctagcattc ccgcaaacga cggcggcaag aaaatcgccg ttttggcaga
    11701 tatgaaagaa ctggggagcc agtccgtcga tctccacaat cagatgattt tgagcctgtc
    11761 gcctgatgtg ctagacaccg tcgttttcta cggtcaggat attgaaggtc tggcccagtt
    11821 ggctagtcag atgttcccaa taggaaaagt ctatttcttt aggaaaaata cagagcagga
    11881 ccaatttgaa gatctggtta aacaggttag ggaaagtcta ggaaaagagg atcaaatcct
    11941 ctttaaaggc tctaattcca tgaatcttgg aaaagtggtg gaagcaatag aaaagtagag
    12001 aggtgagacc tctctttttt agcaagtctt gtcaaaacat cgaaaagttg atatactaac
    12061 ttttggggaa agagaggatt ttaataagat gagtgatttt tttagcaatc agatttctga
    12121 agcaccgaac ctgaacgtat tggaacatct gtttctcatg attatttggt tttttatgct
    12181 ccatctttgt tttcgttgtt atcaaaaaag atggtttcat attgtttttt ggtggcttca
    12241 atttatacag attgtttccc tttatacttg gtatatcgta gctgattttc ctctttcaga
    12301 gagtcttcct ttttatcatt gtcgcttggc catgctcttt attctttggg cgaagcccgg
    12361 acctttgaaa cgttattttg cctatctggg tctttttgga tcgcttgcgg cctttattca
    12421 tccagtattt gacccgtttg cttttccaca ccttaccttc tttacttttg ttattggtca
    12481 ctacgccttg acggttaatt gtatgttgta cctgttatct gatttagaag gggagatgtt
    12541 gaagggaaaa gaggtagtga aatatacgct tattatgaat atgctgattc taggagtagc
    12601 tcttttaact ggcggaaatt atggattttt aagacaggca cctttagtga atactaataa
    12661 tcttcctttg aatttcttct tggtaacctg cctactctgt ttctctattt tgagtataca
    12721 agctatgtta attgcctatt tgaaaaaaga aagcaaacaa atgaattcgc agatattgaa
    12781 aaaataagac ttgaaattag tttttcaagt cttattttta gtttttaaat gcgccttgtt
    12841 tgtggctaat ccagaaaaag acagggataa aaatgagcat tgatccagaa tagattggca
    12901 atgtgtgact gtttaagggg tggatttcaa tcagaccatg taggaaatgg gagctgatga
    12961 agaaaccgaa aacggaataa ataataagag ccagtcgagc ttttgtcagt ggcaaacagg
    13021 cacgaatgac agccagtaga cctgttgaac caagaacata ataagagagg gtttgcatgt
    13081 catgcaagtt taagtatcca aatatttgca ttaaatggaa aataaggaca ctgagaacaa
    13141 ccatgagagc atttggtagg gctaagagaa gagattttct gagaaaatgt ttttctacag
    13201 ggcggatatt tcgttcaaaa gttaggataa aaggaggaaa accttcgaca aattgaccaa
    13261 tgagggtcat ttgtacttga ataaatggga aaactaacaa atattctgct ttacctaggg
    13321 caatactagc gatacagata aggccaagta agaaagaata gattgttttg ataagaaaga
    13381 tgggagcaat gtgggagatg ttattaacaa cgcgtcgccc ctcaaagaga atctcaggaa
    13441 tatcgcgaaa ttcagaatct aggaggacta gattagcgat ttgtctggta gcgggatcac
    13501 cttctgccat aacaatggaa caatcagctt cgcgtagtgc aagaatatca ttgaccccat
    13561 caccggtcat tgcagtagta tgtccctgtg ctttgagagt ttggatgagc aattttttct
    13621 gatgtgggga tacgcgaccg aaaatggcgg ttgtttcagc tctggcaatt agttcttcgt
    13681 cgtctacttt ggaacaatcg atatagctat cgtagtcagc aaatccagct tccctggcaa
    13741 tgtgtgagac cgtcacagga ttgtcaccag agattatttt tagtgtcact tcttgcgagc
    13801 gaagataggc cagtgtttct gcggcgtctt ctcggattgg atcggcaatt tctaatagag
    13861 ctagaggttc aatattctca ggtagctgat tttgagaaga aggaagggac tgttggctaa
    13921 gcgcaagaat taggacacgg gaaccacgag cctgtgcctc agaaacagaa ggaggatttt
    13981 gtgttagtaa catttctggt gcccctagaa aaatgtgacc aatgttttct attgtcattg
    14041 ccccccattt tctatcgcta gaaaatggga tgatgtgact agctttatag tggtgctcta
    14101 aatcaccata ttcttttcga atggcctgag ctgttgaatt agtatcttca cttgtctgga
    14161 tataggtagc gagtatctgt tggatagtgt caaatgaata atggttgttt aaggggagca
    14221 ggttttcgac ggtcattttc ccctgagtaa tcgttccggt cttatccaaa caaagaacat
    14281 caactcgggc aagtgtttcg acggaataca tttcttgtac gaggacattt ttcattccca
    14341 gtttgataac agcagtcaag agagaagtga tggtcagcag agcaattccc tttggtaaca
    14401 tacctagtag ggcagtagag ctggtaataa ctgagtcttt taagggaaga agtttgatga
    14461 aaaaggcttc tagaaaaaga gcaagtccga atggaatgat aatttttcct gtaaatttag
    14521 caattttatc catattgtaa agaatacgag agacgatagg tttgtgagtt ttcgcctcaa
    14581 gcatgagctt attggcatag ttttctgcgc caacatggat gacttttgca taaatctgtc
    14641 cgctaactag atagctacca gacaataatt cagccccagt atttttcaca atcaagtcgc
    14701 tttcaccggt taacatggcc tcgtttgcct cggctatacc ttctaaaaca atagcatcac
    14761 taggaacttg ttcgccagca gacagcaaga gaacatcatc taagacaata tcttctggtg
    14821 caagagagat tgtctcactg tcacgaacaa ctcggataaa atccttgttc atcaggttga
    14881 gtttgtcaat cattcgtcgt gctcgccatt ctgtcagcat tcctgaaaca gcgttgagga
    14941 caataactcc gaagaagaaa aggttggacc atgcctgaac agctagtaag gctaagaaaa
    15001 tggcaaaatt tagtgcgtta aaagatgtaa acacatttcg tctgaagatt tcccaattac
    15061 tggcactggt ctttgtctta aaatgattgg tttgctggtt ttgaatacgt tcttgtactt
    15121 ccttggttga taaacctttt atttgtttgt tcattat
//
LOCUS       DBNFCX010000051        15142 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.051, whole genome shotgun sequence.
ACCESSION   DBNFCX010000051 DBNFCX010000000
VERSION     DBNFCX010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 15142)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15142)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15142
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.051"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(172..510)
                     /locus_tag="AC1PJC_001408"
     CDS             complement(172..510)
                     /locus_tag="AC1PJC_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF/YmcA family competence regulator"
                     /protein_id="HIP6620394.1"
                     /translation="MSTNIYDIANELERAIRNLPEYKAVEAVKVSVEGNSEAKEILES
                     YISFQKEIQSKLQAGEIPTEADQKKMLDFNKKVQGNPLLTEYFSKQQQLGTYVADLER
                     IIFKPLNELL"
     gene            complement(520..1623)
                     /locus_tag="AC1PJC_001409"
     CDS             complement(520..1623)
                     /locus_tag="AC1PJC_001409"
                     /EC_number="1.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HIP6620395.1"
                     /translation="MKKTILIVGLGLIGSSLALCIRKDHPDYHLIGFDPNEQSCQIAL
                     GKGMVDEVSTELEGVAKQADVILLCVPIQVSLRLIEEFSALELKDTVLITDAGSTKSA
                     IVAAAEEHLAPRQINFIGGHPMAGSHKSGASAADLHLFENAYYIMTPCQATKQDAVPR
                     LTDLLSGTGARFVQIDAAEHDRVTSQISHFPHVLASSLMHQAGEYAQDHPFTNNFAAG
                     GFRDMTRIAESEPSMWTSILLTNADSILNRIEEFQARLSEISDVLRSGDQKAIWDFFD
                     KGRQTRKAMEIHKRAGVDSFYDLFLSVPDEEDTILKVLEVLRGISIVNIRINEENRED
                     IHGILQITFKNKGNLEDAAKRLREQTTYKIHLD"
     gene            complement(1631..2797)
                     /gene="aroC"
                     /locus_tag="AC1PJC_001410"
     CDS             complement(1631..2797)
                     /gene="aroC"
                     /locus_tag="AC1PJC_001410"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002997861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HIP6620396.1"
                     /translation="MRYLTAGESHGPRLTAIIEGVPAGLPLTAEDINEDLKRRQGGYG
                     RGSRMQIETDRVEITAGVRHGKTTGAPITLNVTNKDHQKWLDIMAVEDIEEKLKSKRR
                     IKHPRPGHADLVGGMKYRFDDLRNSLERSSARETTMRVAVGAVAKRILAELDIEIANH
                     VVVFGGKEIDVPDGLSVAEIKERAAQSEVSIVNQEREEEIKAYIDQIKRDGDTIGGVI
                     ETVVGGVPAGLGSYVQWDKKLDAKLAQAVVSINAFKGVEFGVGFQAGYLKGSQVMDEI
                     LWSQEKGYTRRTNNLGGFEGGMTNGEALIIRGVMKPIPTLYKPLMSVDIDTHEPYKAT
                     VERSDPTALPAAGVVMESVVATTLATEILEKFSSDNMEELRAAVASHRDYVKNF"
     gene            complement(2800..3474)
                     /gene="aroD"
                     /locus_tag="AC1PJC_001411"
     CDS             complement(2800..3474)
                     /gene="aroD"
                     /locus_tag="AC1PJC_001411"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HIP6620397.1"
                     /translation="MKIVVPIMPRNLEEVEAIDVERLAEADIVEWRADYLPKDDILRV
                     APAIFEKCNGKEVVFTIRTTREGGHLDLDDQEYVNLIKEVAALYQPDYIDFEYYSYKS
                     VFEQMLEFPNLVLSYHNFEETPSNYMEIMSELTSLSPAVVKMAVMAKTEQDVLDVMNY
                     TRGFKSLNTEQTFATIAMGELGKLTRIAGVITGSCWTFASLDETSAPGQMSLGNTRKF
                     LEILEN"
     gene            complement(3471..4634)
                     /locus_tag="AC1PJC_001412"
     CDS             complement(3471..4634)
                     /locus_tag="AC1PJC_001412"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HIP6620398.1"
                     /translation="MKIKVNRIAEQKINRGIQLLDSADFSGFSFDEDRLAVLYSESGS
                     YLGQAYLSKQNKGIGWLFSRSNQDLTMDFFVKLFLAAKQKRQHFYQSEMTNAFRLFNQ
                     DGDNFGGMTVDLYDEYAVFSWYNTFIYSVKEMIVAAFQQVFPEVRGAYEKIRFKGLAF
                     ESAHLYGEEAPEYFTVLENGVHYQVFMNDGLMTGIFLDQHEVRGSLVDGLAAGKSLLN
                     MFSYTAAFSIAAAMGGARETTSVDLAKRSRELSKAHFKVNSLDLDNHHFVVMDVFEYF
                     KYAKRKGLTYDVIVLDPPSFARNKKQTFSVAKDYHKLISQSLEILNTGGTIIASTNAA
                     NVSVEKFKRQIEKGFGVRKHRYEASYRLPADFVINKNDESSNYLKVFTIQVDK"
     gene            4750..6924
                     /locus_tag="AC1PJC_001413"
     CDS             4750..6924
                     /locus_tag="AC1PJC_001413"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0070395 - lipoteichoic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HIP6620399.1"
                     /translation="MKKLIDYVKKIGQTRLGFVLILLIIYWLKTLWAYYVDFNLDTQG
                     FFQNFIAIMNPLPVGILLLGLSLYIKNTKAFYSVAMTIYIVLFAWLFSNAVYYREFSD
                     YISISTMMATSSVSAGLGEAALKLFRLWDIVYFLDFIAFGFLVYRKAFHWDKTPFHKK
                     SSFAITAFSVLLFSINLFLAEIDRPELLTRGFSNTYIVRALGLPAFLGYNANQTYNAH
                     KDRSGATASDLEPVKQYITEHYAQPNDNYFGIAKGRNVIYLHLESLQQFVIDYKLNVN
                     GVEYEVTPFLNSLYHSSSTLAFSNFFNQVKAGKTSDAETMIETSLFGLNQGSFMVQYG
                     GSNTQQAAPYILSQNGGYTSAVFHGNAASFWNRNNTYKQWGYNYFFDQSYFSKATAEN
                     SFQYGLNDKIMFADSIQYLEHLQQPFYTKFITVSNHYPYTTSLIGDEIGFPLANTDDE
                     TINGYFATANYLDASIKAFFDYLKATGLYENSVIVLYGDHYGISNSRNPDLAPLIGKD
                     SQTWSDFDNAMMQRVPYMIVVPGMTNGGIFDTYGGEIDALPTLEHLLGIKSDNYLQVG
                     QDLLSSQHSQIVALRTAGSFITPKYTSYEGKIYYTETGLEITNPDETTQKEIDAIKEA
                     TAAQLATSDAIQTGDLIRFFDNGLPALDSSQYNYIDSLAAEIALENKLGTQSTSLYSK
                     NGNKSTIELFKAPSYLELHGSTTATSTPNTGTSSTSTSSNSQ"
     gene            complement(7221..9716)
                     /locus_tag="AC1PJC_001414"
     CDS             complement(7221..9716)
                     /locus_tag="AC1PJC_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pneumococcal-type histidine triad protein"
                     /protein_id="HIP6620400.1"
                     /translation="MKQGKTLLYVAGVSLICAVALVTYQVSNYKEQSSHQKITSIETS
                     QSKQSREIPSDPKKEVPGIDKATDDGFLLTDESQIEEKTNLGIIVNHGDHKHFFFYSD
                     LKNTKWSYLIPENYQEKTHSSQPNRNQRASGSKQTEDEYIFDPKDIVAEDANGYTVRH
                     GDHYHYILKSSLGGTTHRQLTSGSRQSPTLPIVHQQEGIPGIDFQTSDGFLFDGQNIS
                     GVTETGILVRHGKHLHLIHFETLKKSKWSYLVNQYKPNVESDKKSQPEVENTEYQTKL
                     DYLAKELNLEPSRLKKVIVDGQIGLEYPHGDHTHIVLLKEIDTRKPFESPEDRILKQK
                     DGETLEQRKERLIKQYMERFKVKREDITIDGNYMSVRHGDHAHVYKIDPSLPDDPERD
                     VKTETVNLAIEKQSVYGPFYTEGSTENLTRNGVHQKYHPEGLQDIKNFILVTFSTNSD
                     FGDFVVNGKKTKRVYYLVRKDLNWEDLNITYPQTLQQKGRVFNGWNATLPKSGKMARE
                     HQSFYADFDNVYHKPTKNIYTPSDDVSNIDLSDYVPVKYSAIANGRLKLNGEIRAGFI
                     YFVKSDLTWKQAKEQGLVVPEPVPSKDYEFIEFRTVITGGEKDTDYVSATTSLAAFGT
                     TAPRIGPYIAENMDNPTDINDPSRHPNYHWHDPKNYVALAFRAGDGGQLQTHLGTSKT
                     VVYLVRKGLTLNQAGIFPPSLKSDTGYKRDYTKPVIPNVAWDTPILEDTVYDIHFDKV
                     ESDSKDGVVEPGDTWLPGNPLPNTPDVPNGEEDADGWLDDLLTPGSEVETVTDIETTT
                     EDTKATESSTVAPIDVPKNPSAGEESSEDSIFP"
     gene            complement(9947..10306)
                     /gene="rplT"
                     /locus_tag="AC1PJC_001415"
     CDS             complement(9947..10306)
                     /gene="rplT"
                     /locus_tag="AC1PJC_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019786714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HIP6620401.1"
                     /translation="MARVKGGVVSRKRRKRILKLAKGYYGAKHLLFRTAKEQVMNSYY
                     YAYRDRRQKKRDFRKLWITRINAAARMNGLSYSQLMHGLKLAEIEVNRKMLADLAVND
                     AAAFTALADAAKAKLAK"
     gene            complement(10346..10546)
                     /gene="rpmI"
                     /locus_tag="AC1PJC_001416"
     CDS             complement(10346..10546)
                     /gene="rpmI"
                     /locus_tag="AC1PJC_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002895038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HIP6620402.1"
                     /translation="MPKQKTHRASAKRFKRTGSGGLKRFRAYTSHRFHGKTKKQRRHL
                     RKAGMVHAGDFKRIKSMLTGLK"
     gene            complement(10573..11079)
                     /gene="infC"
                     /locus_tag="AC1PJC_001417"
     CDS             complement(10573..11079)
                     /gene="infC"
                     /locus_tag="AC1PJC_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HIP6620403.1"
                     /translation="MFINDEIRVREVRLIGLEGEQLGIKPLNEAQAIADSANVDLVLI
                     QPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDKGDFETKLRHA
                     RKFLEKGNKVKVSIRFKGRMITHKEVGAKVLAEFAEATQDIAIIEQRAKMDGRQMFMQ
                     LAPASDKK"
     misc_feature    complement(11120..11248)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:15.0:RF00558"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="ribosomal protein L20 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00558"
     gene            complement(11275..11952)
                     /gene="cmk"
                     /locus_tag="AC1PJC_001418"
     CDS             complement(11275..11952)
                     /gene="cmk"
                     /locus_tag="AC1PJC_001418"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005590592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - (d)CMP kinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HIP6620404.1"
                     /translation="MKSIQIAIDGPASSGKSTVAKIIAKNFGYTYLDTGAMYRSATYL
                     ALTNGIEVTDQNRIVALLAQYPIRFGRDENGQQLVFVGDEDVTLPIRDNQVTNNVSAV
                     AALPLVREKLVRLQQEIAQAGGIVMDGRDIGTVVLPQAELKIFLIASVEERALRRFKE
                     NTERGIETDLESLKQEIAARDYKDSHREVSPLKAADDAITFDTTGVSIEGVVKFISEK
                     AKEILDK"
     gene            complement(11962..12444)
                     /locus_tag="AC1PJC_001419"
     CDS             complement(11962..12444)
                     /locus_tag="AC1PJC_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAG1386/EF1546 family surface-associated
                     protein"
                     /protein_id="HIP6620405.1"
                     /translation="MSQEPWNEEVYQTETVSRKERLNKGVASTTVFTVLAIIFFVIVL
                     IIGITAIYLSVGGSKTDSTKEFYNPSSAAVVAESSTSVAETQESTSTDATETETTETS
                     SSLAEATDGSTLTVQAGEGVGQLAARGGISIAELERLNPEKMTTGSWLAHPGDVVRIR
                     "
     gene            12495..12689
                     /locus_tag="AC1PJC_001420"
     CDS             12495..12689
                     /locus_tag="AC1PJC_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HIP6620406.1"
                     /translation="MKIKLIPERCIACGLCQTYSSIFDYDDDGIVIFSDDSQFEKTIE
                     PNPDILKAIKSCPTKAISAD"
     gene            complement(12678..13166)
                     /locus_tag="AC1PJC_001421"
     CDS             complement(12678..13166)
                     /locus_tag="AC1PJC_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EbsA family protein"
                     /protein_id="HIP6620407.1"
                     /translation="MIKIFGKIRYHWQPDLSWAIIYWSLTFTPIFIGMTLLLEKLRVS
                     RLFILLLSLFAVLIVLGLHRYFEIKEKHLRIASANPFAVQKIEIATIEKIEVSYLAIR
                     IFSQEFPNGQVYHMRKWPKKYFINHLAIHNCFKGEIELIDHLIKQDYFEEYYTKKAKS
                     IR"
     gene            complement(13349..14119)
                     /locus_tag="AC1PJC_001422"
     CDS             complement(13349..14119)
                     /locus_tag="AC1PJC_001422"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HIP6620408.1"
                     /translation="MQNNHTFVICAYGDSKYLEECIHSLKQQTLQSQLILYTSTPSEY
                     IEQICQKNAIVMHTAQGGGIGKDWNLALSFVTTPYATIAHQDDMYLPDYCEKIMSQMT
                     EETLIAYSDYQEVKEGVAIPLTSNLKIKQLMLRTMAMFPKWKFWRNRVLAFGNPISCP
                     AVTYNLKKLNDFKFNEEMKVSLDWFAWYQIAQKNGSFTFVDERLMYHRIHEESETTNS
                     IENNIRTKEDYEMYLLFWPKFIAKFLLSYYVKSQETNN"
     gene            complement(14109..14465)
                     /locus_tag="AC1PJC_001423"
     CDS             complement(14109..14465)
                     /locus_tag="AC1PJC_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2304 domain-containing protein"
                     /protein_id="HIP6620409.1"
                     /translation="MTIQALAMFLASLGFLYFIFRNINKNKILFEHAFMWIVIGFGLI
                     VFALFDVIPIKLAYLFGFGLTSNFLLSVAIFVLLVIGFLHSMALSQQKQQIKNLIQEV
                     SMAKKRISELEEHHAE"
     gene            complement(14465..>15142)
                     /locus_tag="AC1PJC_001424"
     CDS             complement(14465..>15142)
                     /locus_tag="AC1PJC_001424"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015604473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HIP6620410.1"
                     /translation="ESILQTVQGIIDYRNSVNFQLDYVVINDGSTDHTKEILIQNKLN
                     AVHLVQNLGIGGAVQTGYKYALDNDYDVAVQFDGDGQHDIRSLNSLIQPILVGQADMV
                     IGSRFVGDTLSEFQTSFMRRFGIGVISNMIKLTTGNRIWDTTSGYRLGNRKVIAQFAK
                     RYPIKYPEPESTVHLLKQNFQVVEAPANMFERAGGVSSITPLKSIRYMVEVCSSILIA
                     SLMKEGE"
BASE COUNT         4491 a         3315 c         2549 g         4787 t
ORIGIN      
        1 attaccatag ctttataaga aatggatgct gtgagaaggt agaaaaaaga gttcttactc
       61 cccaaagtac cgtttctgaa tctgtacttg gagataagaa ctctacgtaa gcagcgtata
      121 ctaggcgtca atccatgacc taacaccctg ctcctatcaa atataaatat attacaacaa
      181 ttcgttgaga ggcttgaaga tgatacgttc caaatcagct acatacgttc ccaactgttg
      241 ttgcttgctg aaatattccg tcaaaagtgg atttccctga actttcttgt tgaaatccaa
      301 cattttcttt tggtcagctt cagtaggaat ttcaccagcc tgcaatttag attggatttc
      361 tttttggaaa gaaatataac tttccaatat ttctttggct tctgaattcc cctcaactga
      421 gaccttaacg gcttccaccg ccttatattc aggcaggtta cggattgcac gttccagttc
      481 atttgctata tcatagatat ttgttgacat atttttctcc taatctaaat ggattttgta
      541 agtcgtctgc tctcttaaac gtttcgcagc gtcttccaaa tttcccttgt ttttaaacgt
      601 gatttgtaaa ataccgtgta tatcttcacg gttctcttca ttgatacgaa tattgacaat
      661 ggaaataccc cgtaagactt ccaaaacctt caaaatcgta tcttcctcat caggaacact
      721 aaggaataaa tcgtagaaag aatcaacacc tgcacgcttg tgaatttcca tggctttacg
      781 agtttgacgt cccttatcaa aaaagtccca aattgctttt tgatcgccag atctgagaac
      841 atctgaaatt tctgagagac gtgcttgaaa ttcctcgatt cgatttagaa tagaatctgc
      901 attggttagc aaaatgctag tccacatgct cggctcactt tccgcaatcc gtgtcatatc
      961 tctaaatcct ccagctgcaa aattattcgt aaagggatga tcttgggcat actcaccagc
     1021 ttgatgcatc aaactagaag ccaatacgtg tggaaaatgt gaaatttgac tggtcacacg
     1081 gtcatgttct gctgcatcaa tctgaacaaa acgtgccccc gttccagata acaagtctgt
     1141 caaccgggga accgcatcct gcttggtagc ctgacacggt gtcataatgt agtaagcatt
     1201 ctcaaataga tggagatctg ctgcactggc accagattta tgactacctg ccatagggtg
     1261 tccaccgata aaattaattt gtcttggcgc caaatgttcc tcagcagcag ccacaattgc
     1321 agacttcgtt gaacctgcat ctgtaatcaa gaccgtatcc ttcaattcaa gggcactaaa
     1381 ttcttcaatc aaacgcaaag aaacttgaat tggaacacaa agaagaatca catcagcctg
     1441 ctttgctaca ccctccaatt ccgttgatac ctcatcaacc atccccttgc ccaaggcaat
     1501 ttggcatgat tgttcgttag gatcaaagcc aatgaggtga tagtcaggat ggtctttgcg
     1561 aatacagagc gcaagtgaac ttccaatcaa ccctagacct acaattaaaa tcgttttttt
     1621 cattaattac ctagaaattt ttgacatagt cgcgatgact ggctactgcc gctctcaatt
     1681 cctccatatt atcggaagag aacttctcta ggatttctgt cgctagagtt gtagctacga
     1741 ctgattccat gactacacca gctgctggga gagccgttgg atctgaacgc tccacagtag
     1801 ctttataagg ctcatgagta tcaatgtcaa ccgacatcaa tggcttatag agggtcggaa
     1861 ttggtttcat aacaccacga atgattaggg cctcgccatt ggtcatacca ccttcgaaac
     1921 cacctagatt attggttcgg cgtgtatatc ctttttcttg ggaccagaga atttcgtcca
     1981 tgacttggct ccctttgaga taaccagctt gaaagcctac tccaaattct actcccttaa
     2041 aagcattgat tgaaacaaca gcctgcgcta attttgcatc taacttttta tcccattgca
     2101 cataagaccc caagccagct ggaactcctc caacaacagt ctcaatcact ccgccaatag
     2161 tatctccatc tcgcttgatt tgatcaatat aagctttgat ttcttcttca cgctcttggt
     2221 tgacaatgga tacttcggac tgggctgcac gctctttgat ttctgctacg cttaaaccat
     2281 ctgggacatc aatttccttc cctccgaaaa cgactacatg gttagcaatt tcaatatcca
     2341 actcagccaa aatccgtttg gcaaccgcac caacagccac acgcatagtt gtctcacgcg
     2401 cactagaacg ctccaaggaa ttacgcaaat catcaaagcg atatttcata ccaccaacta
     2461 ggtcagcatg tcctgggcgt ggatgtttga tacgacgctt acttttgagt ttctcttcga
     2521 tgtcctcaac tgccataata tccaaccatt tttgatggtc tttgttggtc acattcaatg
     2581 taattggagc acctgttgtc ttaccgtgac gaacaccagc cgtaatctct acgcgatctg
     2641 tttcaatctg catccgacta ccacgaccgt atcctccctg gcgacgtttt aaatcttcat
     2701 taatatcctc agctgttaaa ggaagaccag ctggaactcc ctcaataatg gctgtcaaac
     2761 gcggtccatg agactcacca gctgttaaat aacgcatact taattctcca aaatttccaa
     2821 aaacttacga gtattgccta aagacatctg tccaggtgca gatgtttcat ctaagctggc
     2881 aaaagtccag caggatcctg taatcacacc tgcaatacgc gttaacttcc ctagttcacc
     2941 catagcgatt gtcgcaaatg tctgctcggt gttcagcgat ttaaaaccac gagtataatt
     3001 cataacatct aggacatcct gctctgtctt agccattaca gccattttaa caacagctgg
     3061 tgacaggcta gtcagttcag acatgatttc catataatta gacggtgttt cctcaaaatt
     3121 atgataactc aacacaagat taggaaactc caacatctgc tcaaaaaccg acttataaga
     3181 ataatattca aaatcaatat aatctggctg ataaagcgct gcaacttctt tgattaaatt
     3241 gacatattct tgatcgtcca aatccaagtg gccaccttca cgtgttgtcc gaatagtgaa
     3301 aaccacttcc ttaccattac atttttcaaa tatagcaggt gctactctta aaatatcatc
     3361 tttcggaagg tagtctgctc gccattcaac aatatctgcc tctgctagac gttctacatc
     3421 aatggcctct acctcttcca gatttctagg cataatagga actactattt tcatttatct
     3481 acctgtatcg taaagacctt taggtaatta ctactttcat catttttatt gattacaaaa
     3541 tcggctggca agcgataact tgcctcataa cggtgttttc taacaccaaa acctttttca
     3601 atctgccgct taaatttttc aacagaaaca tttgcggcgt tggtcgaagc gataatagtt
     3661 ccacctgtat ttagtatttc caaagattga gaaatcaact tgtgataatc tttggctact
     3721 gaaaaggttt gtttcttatt tcgtgcaaag cttggcggat ccaagacaat cacatcataa
     3781 gtcaagcctt tacgtttggc atatttgaaa tattcaaata catccattac cacaaagtga
     3841 tgattatcta agtctaaact attaacctta aagtgagctt tagaaagttc tcgcgagcgt
     3901 ttggctaagt caacagaagt cgtttccctt gctccgccca tggcagcagc aatagaaaat
     3961 gctgccgtat acgaaaacat gttcaaaagt gacttgcctg ccgccaggcc atccaccaag
     4021 gaaccacgta cctcatgctg atccaaaaag attcccgtca tcagtccatc attcataaag
     4081 acctgatagt gaactccatt ttccaacaca gtgaaatact caggggcttc ttctccataa
     4141 agatgagcag actcaaaggc caaaccttta aaacgaatct tctcataagc tcctcttact
     4201 tctggaaata cctgttgaaa ggcagcaaca atcatctctt tgacagaata aataaaggta
     4261 ttataccatg aaaaaactgc gtattcatca tataagtcaa ccgtcattcc accaaaatta
     4321 tctccatctt gattaaataa acgaaaagcg ttcgtcatct cagattgata aaaatgttga
     4381 cgtttctgtt tagcagctag gaataattta acaaaaaaat ccatggtcaa gtcttgattg
     4441 cttctactaa acagccagcc tattccctta ttctgtttgg acaaataagc ctgacccaaa
     4501 tagcttccag attctgaata caaaacagcc agcctgtctt cgtcaaacga aaaacctgaa
     4561 aaatcagcgc tatccaagag ttgaattcct ctgtttattt tctgttctgc aatacggttt
     4621 acctttattt tcatagaatt attataacat gtttcttcat atatgccaaa aaaactctaa
     4681 actttgaggc ttattttaaa attatggtat aatgaactaa gcttttagaa aggaccatga
     4741 ggctttattg tgaaaaaact aattgactac gtcaagaaga tcggacaaac tcgacttggc
     4801 ttcgtcttga ttttgctaat catttactgg ctcaaaacac tctgggccta ctatgttgat
     4861 tttaatttag atacccaagg atttttccaa aattttatcg ctattatgaa tcctctacca
     4921 gtaggaattt tattgcttgg tctctcgctt tatataaaga atacgaaggc attctatagt
     4981 gtagcgatga ccatttatat tgttcttttc gcctggctct tttcaaatgc agtctattat
     5041 agagaatttt ccgattatat ctccatttct accatgatgg ctacctctag cgtatctgct
     5101 ggattaggag aagcagctct taagttattt aggctatggg atattgtcta ttttcttgat
     5161 tttatagctt ttggtttctt agtctaccgt aaggcatttc actgggacaa aactccattt
     5221 cataaaaaat ctagctttgc catcacagcc ttttcagtat tattattctc tatcaatctc
     5281 tttttagcag aaattgatag acctgagcta cttacgagag gattttctaa tacttatatc
     5341 gtcagagccc ttgggttacc agctttcctt ggctacaatg ctaatcaaac ctacaatgcc
     5401 cataaggatc gctctggggc caccgcctca gacctggagc ctgtaaaaca atatattaca
     5461 gaacattatg ctcagccgaa tgacaactac ttcggtattg ccaaaggacg aaatgttatc
     5521 tatctccacc tagaaagctt acaacaattt gttattgact ataagttgaa cgtcaacggt
     5581 gtcgaatacg aagtcacacc tttcctcaat tctctgtatc attctagctc tactctcgcc
     5641 ttttctaatt tcttcaacca agtgaaggca ggtaaaacct ctgatgccga aactatgatt
     5701 gaaacctcac tttttggact caatcaaggc tctttcatgg tccaatatgg cggaagcaat
     5761 acccagcaag ctgcaccata tattctctct caaaatggtg gctatacatc tgctgtattc
     5821 cacggaaatg cagccagttt ctggaatagg aacaacacct ataaacaatg gggttacaat
     5881 tacttctttg atcaatccta tttctctaaa gccactgctg aaaattcatt ccaatacggt
     5941 ctaaatgata aaatcatgtt cgccgactct atccaatatc tggaacattt acagcaaccc
     6001 ttctatacca aatttatcac agtttccaac cactacccct atacaaccag cttgattggg
     6061 gatgagattg gctttccatt agccaataca gatgatgaaa ccattaatgg ctattttgct
     6121 actgccaact atctcgatgc gtccataaag gcatttttcg attacttaaa agcgactggc
     6181 ttgtacgaaa actccgtcat cgtcctctat ggtgatcact atggaatttc taattcgcgc
     6241 aatcctgact tggcaccgtt gattggaaaa gattctcaga cttggtcaga ttttgacaat
     6301 gccatgatgc aacgtgttcc atatatgatt gttgtacctg gaatgaccaa cggtgggatt
     6361 tttgatacct atggtggtga gattgatgca cttcctactc tcgaacatct tttaggaatc
     6421 aaatccgata actatcttca agttggtcaa gacctacttt ccagccaaca cagccaaatt
     6481 gtggctcttc gaaccgctgg cagtttcatc acaccaaaat acactagcta cgaaggtaaa
     6541 atctactata cagaaactgg tcttgaaatt acaaatccag atgagacaac tcagaaagaa
     6601 attgatgcaa ttaaagaagc taccgcagca caactggcga ctagcgatgc cattcaaact
     6661 ggtgatctta tccgattctt cgacaatgga ttgccagcct tggattcaag tcaatataac
     6721 tacattgact cattggctgc cgagattgca ctggagaata aacttggtac acaatcgaca
     6781 agtttgtata gtaaaaacgg caataagtca acaattgaac tatttaaagc accaagctac
     6841 ctagaacttc acggtagtac aactgctact agcacaccaa atactggtac tagctcaaca
     6901 agtaccagtt caaattcgca gtaatacact aaaaggctta gaatcatgtc agttactaca
     6961 ttgattctaa gcctttttat actcaatgaa aatcaaaaac aggctagctc caaaggtttg
     7021 gggaaccttt ggaggttgga gatagagcga acgtagttcg tttctactta gcagatagaa
     7081 ccctgttact attttgtttc aaggtaacag gctgaaaggc tccactggag cctttcactc
     7141 atcaaatcaa gtcaacaacg tctgattttg attttcgaaa agtattagac cactatttca
     7201 aatcactcat atctattgca tcaaggaaat atagaatcct cactagactc ttcccctgct
     7261 gatggattct tagggacatc tatgggtgca acagtactac tttctgttgc ttttgtatct
     7321 tctgttgtag tttcaatgtc tgttacagtt tctacttctg aaccaggtgt caacaaatca
     7381 tctaaccagc cgtctgcatc ctcttctcca ttaggaacat ctggagtatt cggcaatgga
     7441 tttccaggca accaagtatc acctggctca accaccccat ctttgctatc actttcaact
     7501 ttatcgaaat gaatatcgta gacagtatct tccaaaatag gtgtgtccca tgctacattt
     7561 ggaataacag gttttgtata atctcgttta taacctgtat cactcttcaa agatggcgga
     7621 aaaattccag cttggttcag tgttaaccct tttctaacaa ggtaaacaac tgttttacta
     7681 gttcccaaat gggtctgaag ttgaccgccg tcacctgctc gaaatgcaag agctacataa
     7741 ttctttggat catgccaatg gtaatttgga tgtctacttg gatcattgat gtccgttgga
     7801 ttatccatat tttcggcaat atatggccct atacgaggag ctgttgtccc aaatgctgcc
     7861 aagctcgttg tggcactaac ataatctgta tctttttctc caccggtaat aactgtccta
     7921 aactcgatga attcataatc tttgcttgga accggttctg gtacaacaag cccctgctcc
     7981 ttagcttgtt tccaagttaa gtcagatttc acaaagtata tgaaccctgc tcgaatctca
     8041 ccatttaatt ttaaacgacc attggctatc gcactatatt taacaggtac atagtctgat
     8101 aaatcaatat ttgaaacatc atcacttgga gtgtaaatat ttttggttgg cttatgataa
     8161 acattatcaa aatcagcata aaaactctga tgttctcttg ccatcttgcc agactttggc
     8221 aaagtagcat tccaaccatt aaagacgcgt cccttttgtt gaagggtctg cgggtaggtg
     8281 atgttcaaat cttcccagtt taaatcttta cgaaccaaat aataaactct cttcgttttt
     8341 ttaccattaa cgacaaaatc accaaaatca ctatttgtac tgaatgttac tagaatgaaa
     8401 tttttaatat cctgaagccc ttctggatga tacttttgat gaacaccatt acgtgttaaa
     8461 ttttctgttg aaccttctgt ataaaaaggc ccatataccg attgtttctc aatagcaaga
     8521 tttaccgttt cggtcttaac atcacgctca ggatcatctg gcaaactagg atcaatttta
     8581 taaacgtgcg catggtcccc atggcgtaca ctcatatagt tcccgtcaat tgtaatgtcc
     8641 tcacgcttga ctttaaaacg ctccatgtac tgcttaatga gacgttcttt tctctgttca
     8701 agagtttctc catccttttg cttaagaata cgatcctctg gactttcaaa cggcttcctt
     8761 gtatcaattt cctttaataa aacaatgtgt gtgtgatctc catgcggata ctctaatcca
     8821 atttgaccgt caacgatgac tttcttaaga cgtgatggct ctaaattcag ttcttttgct
     8881 aagtagtcca acttggtttg atactcagta ttttctacct caggttgtga cttcttatcc
     8941 gattcaacat ttggtttata ctgattcaca agataagacc atttactctt tttcaatgtt
     9001 tcaaaatgaa taagatgcaa atgtttccca tgccttacta gaatcccggt ttccgttaca
     9061 ccgctgatat tttgcccatc aaacaagaaa ccatcactcg tttgaaaatc aatccccgga
     9121 atcccttcct gttggtgaac gataggaaga gttggcgatt gacgactacc ggaggtcaat
     9181 tgcctgtgtg tcgtgccacc taagcttgat tttaaaatat agtgataatg atccccatgc
     9241 cgaacagtat agccatttgc atcctctgcg acaatatctt taggatcaaa aatgtattca
     9301 tcttcggtct gtttcgaacc agatgctcgc tgatttctat taggttgaga agaatgtgtt
     9361 ttttcttgat agttctcagg aattaaatag gaccattttg tattctttaa atctgagtaa
     9421 aagaaaaaat gcttatgatc accatgattg acaataattc ctaaattagt tttttcctca
     9481 atttgtgact catcagtgag taaaaaacca tcatctgtcg ccttatcaat ccctggaact
     9541 tcctttttcg gatctgaagg aatctctctt gattgctttg attgcgatgt ttctatgctt
     9601 gttatttttt gatggctcga ttgctcttta taatttgaca cttgataggt taccaatgct
     9661 acagcacaaa taagcgatac tcctgctaca taaagcaaag tcttaccttg tttcatatca
     9721 ctgtttctct ccttacttac tattatattt atattattga catgataaat ggattctacc
     9781 cttgtagaat gccatcgcca tatccattta cttcataaaa taaaatttgt cgccttttta
     9841 atttaccagt taagtatatc attcatatta aaatttagca agccctgagc aaattaaaac
     9901 aaaataaaga gcttggtaca cagaccaaac cctttatttt atatacttat ttagcaagtt
     9961 ttgctttagc agcatctgca agagctgtga aagctgctgc atcgtttact gccaagtcag
    10021 caagcatttt gcggtttact tcgatttctg ccaatttcaa accgtgcatc aattgtgagt
    10081 atgacaaacc gttcatgcga gcagccgcgt tgatacgagt gatccacaat ttacggaaat
    10141 cacgtttttt ctgacggcgg tcacggtatg catagtagta agagttcatt acttgttctt
    10201 tcgcagtgcg gaacaagaga tgtttagctc cgtaataacc tttagctaat tttaaaatac
    10261 gtttacggcg tttacgagaa acaacgccac ctttaacacg tgccatttaa ttttcctcca
    10321 aataatctaa attctagtag tcggcttatt tcaaacctgt aagcattgat ttgatacgct
    10381 tgaagtcacc agcatgtacc atacctgctt tacgaaggtg acgacgttgt tttttagttt
    10441 taccgtggaa acggtgtgaa gtataagcgc ggaagcgttt caatccacca gaacctgtac
    10501 gtttgaaacg tttagctgat gcgcggtgag ttttttgttt tggcatgtta attctccttt
    10561 tgcttaaaaa gcttattttt tatctgaagc tggggccaat tgcataaaca tttgacgtcc
    10621 atccatctta gcgcgttgtt cgataatggc aatatcttgg gttgcttcag cgaactcagc
    10681 taatactttc gctccaactt ctttgtgggt aatcatacga cccttgaaac ggatcgaaac
    10741 cttaacctta tttccttttt caaggaattt acgggcatga cgaagttttg tctcgaagtc
    10801 ccctttatca ataactggac ttagacgcac ttcttttaca gtgacaacac tttgtttttt
    10861 gcgttgttct ttctgtttct tctgatattc aaatttgaac ttaccgtagt ccataatttt
    10921 cgctactggt ggtttagctt gcggttgaat caatactaaa tccacgttgg cgctatcagc
    10981 aatggcctga gcctcattga gcggtttgat tcccaactgt tcaccctcaa gaccgataag
    11041 acgaacttca cgcactcgaa tttcatcatt gatgaacaaa tcttgctttg ctatggcttt
    11101 tcacctcatt ttatattttt cgagaaaaac gaaacggact tgctaaacaa gtccgcacta
    11161 caccattatt ctttccgaag aaatcttaat ccgtagagcc agacaacgtt agtcgcaagg
    11221 cgagaagctc tcacttctgc ttttctcaat acgactattc taacatgtcc aaaactactt
    11281 gtcaagaatt tctttcgctt tttctgaaat aaatttcact acaccttcga tggatactcc
    11341 tgttgtatca aaggtaatgg catcgtctgc tgcctttaaa ggagaaactt ctcgatggga
    11401 atctttatag tcacgagccg caatttcctg ctttagagat tccaagtcag tctcaatgcc
    11461 acgttccgta ttttccttga aacgacggag ggcacgctct tcaacagagg caataaggaa
    11521 tattttgagt tctgcctgtg gtaaaacaac tgttccaata tcgcgaccat ccatgacaat
    11581 accaccagcc tgggcaattt cctgttgcag gcgtaccaat ttttcccgta ctagaggaag
    11641 tgctgctact gctgatacat tatttgtaac ttggttatca cgaataggca aagtgacatc
    11701 ttcatcaccc acaaaaacta attgttggcc attttcatca cgcccaaatc gaataggata
    11761 ctgagcaagc aaggccacga ttctattttg atctgtgacc tctatgccgt ttgtcaaggc
    11821 tagataggta gccgagcgat acatagctcc tgtatctaag taagtatatc caaaattttt
    11881 agcaataatt ttagcaaccg ttgactttcc acttgaagct ggaccgtcaa ttgcaatttg
    11941 aattgatttc ataacccctc tttatctaat acggactaca tcacctggat gcgcaagcca
    12001 agaccctgtg gtcattttct ctggatttaa tcgctctagc tcagcaattg aaatcccgcc
    12061 acgtgcggct aattgcccaa caccttcacc tgcttgaaca gtaagagtcg agccatccgt
    12121 agcttctgct agactggaac ttgtttccgt tgtttctgtt tctgtcgcat cagtagaagt
    12181 agactcctgt gtttctgcaa ctgaggttga actttctgct acaactgccg cggagcttgg
    12241 attataaaat tctttagttg aatctgtttt acttcctcca accgacaaat agatggcagt
    12301 gataccaata atcagtacga taacaaagaa aataattgcc aagactgtaa atactgttgt
    12361 acttgctact cccttgttta aacgttcttt tcgactaact gtttctgttt gataaacttc
    12421 ttcattccat ggctcttgtg acattatcga gaaaactcct tgtattttta ttaaaatatg
    12481 attacaatac taatatgaaa ataaaactta ttcctgaacg gtgcattgcc tgcgggctct
    12541 gccaaaccta ttcatctata ttcgattatg atgacgacgg tatcgttatt ttttcagacg
    12601 actcacaatt tgagaaaacg attgaaccca atccagatat tctcaaagcc atcaaatcat
    12661 gtcctacaaa agccatttca gcggattgat ttggcttttt ttgtataata ctcttcaaaa
    12721 taatcctgtt ttattaaatg gtctattaat tcaatctcac ccttgaagca attatgaata
    12781 gctaaatggt taataaagta ttttttcggc catttgcgca tgtgatacac ctgcccattg
    12841 ggaaattctt gtgaaaatat gcgaatggct agataagaaa cttcaatttt ttctatggta
    12901 gcaatttcaa ttttctgtac tgcaaaagga ttagccgaag caatccgtaa atgcttttct
    12961 tttatctcga aatagcgatg taagccaagc actattaata cagcaaagag agagagaagt
    13021 aagataaata atcttgaaac tctcaacttt tccaataaaa gtgtcatacc aatgaaaata
    13081 ggcgtgaagg taagtgacca gtaaataatg gcccatgata aatccggttg ccaatggtaa
    13141 cgaattttac caaaaatttt gatcatatca gacctccatc tattattcta gcacaaaaaa
    13201 agagattttc ctatgaaaac ctctatcttt tgaaattttt tattacattt acatgacaat
    13261 attagttagt ttgtaaaact tctgaaatgc ttttgaaata ttttgagtag aaattggtgg
    13321 gaatacaatg attggtaact aaaaaatttt aattattcgt ctcttgactc ttaacatagt
    13381 aactcaggag aaacttggca ataaactttg gccagaacaa caaatacatt tcatagtctt
    13441 cttttgtacg aatattgttt tcaatgctat ttgtcgtctc agattcctca tggatacgat
    13501 gatacatcag tctctcatct acaaaggtaa agctcccatt tttttgtgca atctgatacc
    13561 aagcaaacca atcaagagaa actttcattt cttcattaaa cttgaaatca ttcagtttct
    13621 tcaaattata ggtcacagct ggacaagaaa ttggattacc aaaggctaaa accctattcc
    13681 gccaaaactt ccatttggga aacatggcca ttgtccgtaa catgagttgc ttgattttca
    13741 aatttgaagt taagggaata gccacacctt ccttaacttc ctggtaatct gaataagcaa
    13801 tcaacgtctc ctctgtcatc tgagacatta ttttttcaca atagtctggt aaatacatat
    13861 catcttgatg agcaattgta gcataagggg ttgttacaaa agagagtgct aaattccaat
    13921 cttttccaat acctcctcct tgtgcggtat gcattacgat tgcattcttt tggcaaattt
    13981 gttctatata ttcactcgga gtactagtgt ataggataag ttgtgattga agtgtttgct
    14041 gctttaacga atggatgcat tcttctagat acttactatc tccataagca cagataacaa
    14101 atgtatggtt attctgcatg atgctcctcc aactcagaga ttcttttttt agccattgat
    14161 acttcttgaa ttaaattttt aatctgctgc ttttgttgag ataaagccat actatgcaaa
    14221 aatccaatca ccaagagaac aaaaattgcc acagataaca agaaattgga agtcagacca
    14281 aacccgaata agtaagccaa tttaatagga ataacatcaa agagcgcaaa aacaatcagt
    14341 ccgaagccaa taacaatcca cataaaggca tgttcgaata aaatcttatt tttattaata
    14401 ttcctaaaaa taaaatacaa aaaacctagt gaggcaagaa acatagctaa tgcttgtatg
    14461 gtcattattc tccctccttc attaatgatg caatcaagat tgatgaacaa acctcaacca
    14521 tataacgaat cgattttaga ggtgttatgg atgaaacccc tcccgctctt tcaaacatat
    14581 ttgccggtgc ttctactact tggaaatttt gctttagtaa atgaacagtt gattccggtt
    14641 ccggatattt aattgggtat cgttttgcaa attgtgcaat cacttttcta tttcccaaac
    14701 gataacctga tgtagtatcc caaattcgat ttccagttgt taatttaatc atatttgaaa
    14761 taacacctat tccaaaacgc ctcataaagc tagtttgaaa ttccgacaaa gtatcaccaa
    14821 caaagcgtga gccaatcacc atatcagcct gaccaactaa gattggctga attaagctat
    14881 ttaatgaacg aatgtcatgc tgaccatcac catcaaattg aactgctacg tcatagtcat
    14941 tgtccaaggc atatttatat cccgtctgaa cagctccacc aatacctaaa ttttgtacta
    15001 gatgaacagc atttaattta ttttgaatca aaatttcttt cgtgtgatct gttgagccat
    15061 cattaatgac aacataatcc aattggaaat ttacactatt tctataatct ataattccct
    15121 gaacagtttg aaggatactt tc
//
LOCUS       DBNFCX010000052        14892 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.052, whole genome shotgun sequence.
ACCESSION   DBNFCX010000052 DBNFCX010000000
VERSION     DBNFCX010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 14892)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14892)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14892
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.052"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            16..1803
                     /locus_tag="AC1PJC_001425"
     CDS             16..1803
                     /locus_tag="AC1PJC_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HIP6620411.1"
                     /translation="MKKTTKLFALAGVTLLSASVLAACGSKQSGAAKQELSFPAEVKQ
                     DGTAVSDAQLKYAWVSPTTSSGLLIDELTENTTDSTFGGFVDISLFGFDGNRKLDDSG
                     LAKAEFDVAGKKITVSLTGKDYKWSDGQPFTINDYIFTIKSMASKDYTGVRFDDKFLN
                     IVGMEEYVAGTASDISGLKKIDDYTVELTVKEMSPSMMYAGGDVPAYIQPEHIYKDIP
                     VADWEKSEYSRTAKLVGMGPWKIKEIVNGESITYVPNEYYFKGQPKTSSLKVDIVSPD
                     TIVSEMKAGNYDIAEMPVDQLDSYKDASNLNIVGRLDSAYEYISFNLGKYDESAEKNV
                     MDENAKMNDVKLRQAIAYAIDTKTAGESLYNGLYHPANSLIISFFGDIHDSELEGYSY
                     DPEKAKKLLDEAGYKDVDGDGIREGKDGKEFKITFAARKRTEANEALVQQYIAWWKEV
                     GLNVELYTGRTVEINTFYEAVQANDPAIDMYAGGWSTGYDPNPTGTWGPIAAFNMSRF
                     VSDENTKLLNAISSTESFDDKKNVENYKAWQKYAYEQAFAIPTFESEKVTALNKRVKN
                     FDSNYGSASGNGIAYEGIELTADKGVVAE"
     gene            2180..3178
                     /locus_tag="AC1PJC_001426"
     CDS             2180..3178
                     /locus_tag="AC1PJC_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6620412.1"
                     /translation="MATEKPLLDIKDLHVGFRIGDDYFDAVDGVDISLQKNEILAIVG
                     ESGCGKSTLATTIMGLHNPLNTKITGSIQYNDMELIGMDEAKYNTVRGNDIGMIFQDP
                     LASLNPLMTIGAQIDEALFYHTDLDANARTERVLELLAQVGIPNPKRTFKQYPHELSG
                     GMRQRIIIAMALSCKPPIIIADEPTTALDVTIQAQILDLLNDIQAETGSGIILITHDL
                     GVVAETADRVAVMYGGQFVEVAPVEELFTNPKHPYTRSLLKSNPQSGSEGGDLHVIEG
                     IVPPITKMVRKGCRFAPRIPWIGAEAHEENPSMHEVGPNHFVRCTCHETFYFEGEA"
     gene            3181..4122
                     /locus_tag="AC1PJC_001427"
     CDS             3181..4122
                     /locus_tag="AC1PJC_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIP6620413.1"
                     /translation="MGFIEVKDLKVHYPIRSGFFNRVTDHVYAVDGVNIEFEEGKTYG
                     LVGESGSGKSTIGKAIIGLERATSGQIIYEGQNVTNKSRGKKGNFNRDVQMIFQDSLS
                     SFNPKKRILDIIAEPIRNFDRLSPDEEKKKVLHLLDTIGLNEEALIKYPHEFSGGQRQ
                     RIGVARALASNPRLIIADEPVSALDLSVQAQVLNYMKRIQDEFKLSYLFISHDLGVVQ
                     HMCDELFIMYRGRFVETGNKNDIYNNPQHIYTKRLLSAIPTIDPVNRLKNKEKRLAAE
                     KEYQEMQGQYYDENGRVYDLRSFSETHQVALPEGGQN"
     gene            4124..5080
                     /gene="opp4B"
                     /locus_tag="AC1PJC_001428"
     CDS             4124..5080
                     /gene="opp4B"
                     /locus_tag="AC1PJC_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010750774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease"
                     /protein_id="HIP6620414.1"
                     /translation="MWKTVLRRLLMMIPQIIILSIIAFFVAKMMPGDPFTGLIDPNID
                     PAIIEQKRIAAGYYDPIPVQYFRWIGNLLQGDFGQSILFKQPVVDVIMQRLNNTIWLS
                     LLTMVLTYLIALPLGMIAGRYQNSLADKIIGVYNFLTFSTPTFVFAILMLWMFGFSLG
                     WFPTRGSIDGGVEGFAAILSRLHHMILPAITMAILSTTVTIQYLRTGIIDAKSQDYVR
                     TARAKGVPERVVYNRHIFRNSILPIASFLGYELTGLIGGSIFIENIFTYPGIGQLFFN
                     SISSRDYSVILALLLIFGMGTLLGTLISDIIMSIVDPRIRVK"
     gene            5094..5996
                     /locus_tag="AC1PJC_001429"
     CDS             5094..5996
                     /locus_tag="AC1PJC_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIP6620415.1"
                     /translation="MSKENKKQVQSASTPPGGFRVIAREFMKDRLALTSLIILVTVLL
                     AVFIGALLLDQEQVMKVNLLGRYLEPGVNGYILGTDEGGKDIFGQLIIGARNSIIIGF
                     TITIITSIVGISIGLISGYYGGRLDGFLMRIVDFIMILPVTMLIIVFVTVIKNYTIYH
                     FILIMSAFYWTAKARLFRTRTLSEASLDYVNASKTLGTSDFMIMFREILPNLSSLIIV
                     NLTLNFAGNIGIETSLTYLGFGLPSTVPSLGTLIANARNADILENKTWIWLPAAIFIL
                     VMMLCINYVGQAFQRAADAKQRLG"
     gene            6118..6483
                     /locus_tag="AC1PJC_001430"
     CDS             6118..6483
                     /locus_tag="AC1PJC_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018371966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp23/Gls24 family envelope stress response
                     protein"
                     /protein_id="HIP6620416.1"
                     /translation="MTVKINTKDGQIELTDDVIATVVGGATTEIFGVVGMASKSAIKD
                     NFQALLRKENYSKGVVIKTLEDGRIAVDVYTVMSYGVKISEVSRNIQERVKFNLENQL
                     GISVDAVNVFIQNIKVVGE"
     gene            6486..8150
                     /locus_tag="AC1PJC_001431"
     CDS             6486..8150
                     /locus_tag="AC1PJC_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004193336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DAK2 domain-containing protein"
                     /protein_id="HIP6620417.1"
                     /translation="MSKITTSLFQEMVQAASTRLNKQAEYVNSLNVFPVPDGDTGTNM
                     GMTITNGAKEVADKSASTVGEVAQILSKGLLMGARGNSGVITSQLFRGFGQSVKGKVE
                     LDGKDLAQAFQHGVEVAYKAVMKPVEGTILTVSRGAATAALKKAEETDDAVEVMRATL
                     DGANRALKKTPEMLPVLKEVGVVDSGGQGLVYIYEGFLSALTGEYIASEDFEATPAVM
                     SEMINAEHHKSVAGHVATEDITFGYCTEIMVALRQGPTYVKDFDYEEFRNYLNDLGDS
                     LLVVNDDEIVKVHVHTEDPGLVMQAGLQYGSLVKVKVDNMREQHEAQVEKEESFQKPA
                     EQKEYAIIAVAAGEGLTEIFKSQGVDYVISGGQTMNPSTEDFVNAIELVNARNVILLP
                     NNKNILMAAQTAAEVAEVAVKVVETKTLPQGFTSLLAFDPSRDLESNFEAMTASLAEV
                     KSGSVTTAVRDTTIDGLEIHENDNLGMVDGKIVVSNPDMMETLVATFEKMLDEDSEIV
                     TIYIGEDGDEELAQTLAEQLEEQFEDVEVEIHQGNQPVYPYLFSVE"
     gene            8252..8692
                     /gene="tsaE"
                     /locus_tag="AC1PJC_001432"
     CDS             8252..8692
                     /gene="tsaE"
                     /locus_tag="AC1PJC_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HIP6620418.1"
                     /translation="MYSQNENELIAIGERIGKACKPNQVLVLSGDLGAGKTTLTKGLA
                     KGLKIEQMIKSPTYTIVREYEGIMPLYHLDVYRIGDDPDSIDLDDFLYGGGLTVIEWG
                     ELLDVSLFDDYLLIRIEKEGDGRRLTVESHGAQSSDLAKEFQNV"
     gene            8685..9212
                     /locus_tag="AC1PJC_001433"
     CDS             8685..9212
                     /locus_tag="AC1PJC_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase family protein"
                     /protein_id="HIP6620419.1"
                     /translation="MSEKEVYFSEAEPADAAAFIDFMNQVARETDYLVMDETGFRFSV
                     DEMETIFEAGIENPRELCLLAKVGSEVIGAISVKSSKQFRISHIGNIFIAVKKAYWGH
                     GLGTILLEEVLHWAEEMDVLKRLELTVQVRNQAAVHLYQKLGFNIEGTQIRGARTDEG
                     EWLDLYYMGKLIGEV"
     gene            9209..10402
                     /locus_tag="AC1PJC_001434"
     CDS             9209..10402
                     /locus_tag="AC1PJC_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0070726 - cell wall assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HIP6620420.1"
                     /translation="MTIGKKIFLMSLAIVGLTLGAGLIYGASLLNFSTGTISKTYKQL
                     DGEKEITPIDATEPLTILLMGVDMDQATRGGDWEGGRSDSMILVTVNPKTKETNMMSL
                     TRDIMVEIAEANGESSGTVEKLNHSYSYGQAPMAIATIEKMMDINIDRYIEINMDGLI
                     ELVDAVGGIEVNNTLGFPISISEHEPAYTSIVQPGKQLVNGDQALVYARMRYDDPEGD
                     IGRQRRQREVITAIIKKLLQLDGLTQYKKILTAISNNMRTNIEISPATIPSLLGYKDS
                     VSKLNSYQLRGVDQMVDEIYYQLPTSTHLLEMQNILKKSIGLEENTDLVTNVKVYEGQ
                     MGLPSPINVYDVYTNLLLLEASPWAESLDPEIGSPSATTTVTTEEQVTDFSTEPVLGD
                     ENGSQ"
     gene            complement(10512..10814)
                     /locus_tag="AC1PJC_001435"
     CDS             complement(10512..10814)
                     /locus_tag="AC1PJC_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HIP6620421.1"
                     /translation="MKLRNIILAVSAATASFLAVTHRDKITKEIKETKQLLSDIQLSK
                     DNIQEQLAIIQSFQEPLQEMASDLQYKTRVYQQSIAGNLEEIQQVLKKYQNENSTP"
     gene            complement(10816..11229)
                     /locus_tag="AC1PJC_001436"
     CDS             complement(10816..11229)
                     /locus_tag="AC1PJC_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HIP6620422.1"
                     /translation="MSDCIFCKIISGEIPASKVYEDGQVLAFLDITQVTKGHTLVVPK
                     KHYQNVLDMDKEAAATLFSVVPTIARQLKEKLGASGLNIVNNNEEAAGQTVFHTHIHL
                     LPRFNNQDGLSIQFKTNDPDFPALAQLAQELYLGE"
     gene            11292..12026
                     /locus_tag="AC1PJC_001437"
     CDS             11292..12026
                     /locus_tag="AC1PJC_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6620423.1"
                     /translation="MLEVKNVTGGYVNIPVLKDVSFTVEDGQLVGLIGLNGAGKSTTI
                     KEIIGLLTPYQGQIAIDGLTLLQGAENYRKKIGFIPETPSLYEELTLKEHLEVVAMAY
                     DLSWEQAWGRVEHLLKLFRLDEKLDWFPVNFSKGMKQKVMIICAFMVEPSLLIVDEPF
                     LGLDPVAISDLIALLEEEKSKGTSILMSTHVLDSAEKMCDSFVILHQGQVRATGNLEE
                     LQSAFGMDGASLNEIYLALTQEGVAG"
     gene            12023..13063
                     /locus_tag="AC1PJC_001438"
     CDS             12023..13063
                     /locus_tag="AC1PJC_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIP6620424.1"
                     /translation="MKELFQQRRIDFLNRCSKYLRYILNDHFVLVLMVLLGFLSLQYR
                     QLLLSFPENPLPIVFVVIAISLLVLLSGRIATYLEEADQIFLLTKEKDILQGLEVAAR
                     RTVLFWSSIQVVVQLVLLPIYLKLGLPVWMIVAGLLTLLVLKCLFVKRQLVAYQSQGV
                     LDWSKAIQDEQKRKQSILRFFALFTTVKGISTTVKPRSYLNGILRLVKSRQTWFYLYL
                     RAFLRSGDYLGLTIRLLLLAILSLFAIEESWLSIGLVLVFHYLLVFQLLGLYKHYDYQ
                     YVTQLYPLEKDSKKIGLQNLLRVILYSLLLVELGFALLFSKENTMVVVLLLVGIFLHE
                     IYLPLKLKKLID"
     gene            13113..13907
                     /gene="ccrZ"
                     /locus_tag="AC1PJC_001439"
     CDS             13113..13907
                     /gene="ccrZ"
                     /locus_tag="AC1PJC_001439"
                     /EC_number="2.7.1.15"
                     /EC_number="2.7.1.229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004747 - ribokinase activity [Evidence
                     IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_function: GO:0019200 - carbohydrate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0051726 - regulation of cell cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell cycle regulator CcrZ"
                     /protein_id="HIP6620425.1"
                     /translation="MQFDTSGLQLQSIAGNSGKAFKGLRSDGTPVFVKYEMPPIVSAL
                     AREQITPPVLSANREVGMGHRVEQEWLNGRTLERQDMTSKQIRQILVRMHYSRILLNQ
                     ALQMNYTYMEPQDLVYRWQKEAPTRLGQNSYLQSICQDLLNNLPRFRQEVATFVHGDL
                     HHSNWVETTSGLVYLTDWETACVTDRMLDVAYILTHYIPRQSWEEWLRAYGYKYNSTV
                     LNKVYWYGQLGYLNQIAKHVESYNVLAANKEIYALRQFRQSFYKEV"
     gene            13904..14542
                     /gene="trmB"
                     /locus_tag="AC1PJC_001440"
     CDS             13904..14542
                     /gene="trmB"
                     /locus_tag="AC1PJC_001440"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HIP6620426.1"
                     /translation="MRVRNRKGASELLANNPQYVISNPEECKGKWAEIFGNNNPIHIE
                     VGSGKGRFVTGMAAQNPDINYIGIDIQMTVLSYALDRVLEAGLPNIKLLQVDGSSLTN
                     YFAPAEIDQLYLNFSDPWPKKRHEKRRLTYKSFLDTYKEILPEKGEIHFKTDNRGLFE
                     YSLASFSQYGMVLKQVWLDLHADGLEGNVMTEYEEKFSNKGQVIYRVEAQFQ"
BASE COUNT         4296 a         2614 c         3458 g         4524 t
ORIGIN      
        1 aaacagaggt gttttatgaa aaagacaacg aaactttttg cacttgcagg tgtgactctc
       61 ctttcagcat ctgttcttgc agcatgtggt tcaaaacaat caggtgcagc aaaacaggaa
      121 ttgtcattcc cagctgaggt aaaacaagac ggaacagcag tgtctgatgc tcagttgaaa
      181 tacgcatggg tatcaccaac aacttcatca ggtctcttga ttgacgagtt gactgaaaat
      241 acaactgact caacatttgg tggttttgtt gatatctcac tgttcggttt cgatggaaat
      301 cgtaagttag atgattcagg tcttgctaaa gctgaatttg atgtagcagg taagaaaatc
      361 acagttagct tgacaggtaa ggactacaag tggtcagatg gtcaaccgtt cacaatcaac
      421 gactacatct ttactatcaa gtcaatggca agcaaagact atacaggtgt tcgtttcgat
      481 gacaaattct tgaacatcgt tggtatggaa gagtatgttg ctggaacagc ttctgacatc
      541 tctggtctta agaaaattga tgactacaca gtagaattga ctgtaaaaga aatgtcacct
      601 tcaatgatgt atgcgggtgg tgatgtccca gcctatatcc aaccagaaca tatctataaa
      661 gacatccctg ttgcagactg ggaaaagagc gagtactcac gtacagctaa acttgttggt
      721 atgggacctt ggaaaatcaa ggaaatcgta aacggtgagt ctatcactta cgtaccaaac
      781 gaatactact tcaagggaca accaaaaaca agctcattga aggttgatat tgtatctcct
      841 gatacaatcg tttctgagat gaaagctggt aactatgaca ttgctgagat gcctgttgat
      901 cagttggatt cttataaaga tgcatctaac ttgaatattg ttggtcggtt agactcagct
      961 tatgaatata tttcattcaa ccttggtaaa tatgacgagt ctgctgagaa gaatgtcatg
     1021 gatgaaaatg ctaagatgaa tgatgtgaaa cttcgtcaag cgattgccta tgcgattgat
     1081 accaagacag ctggtgagtc attgtacaat ggtctttacc accctgcaaa ctcattgatt
     1141 atctcattct tcggcgatat tcatgattca gagttggaag gttattcata cgatcctgaa
     1201 aaagcgaaaa aactcttgga tgaagctggc tacaaagacg tagatggcga tggtatccgt
     1261 gaaggtaaag acggtaagga atttaagatt acctttgctg ctcgtaaacg tactgaagcc
     1321 aacgaagcgc ttgtacaaca gtacattgct tggtggaaag aagttggctt gaacgttgaa
     1381 ctttacacag gccgtacagt tgaaatcaat acattctacg aagctgttca agcaaatgat
     1441 cctgctatcg atatgtacgc tggtggttgg tcaacaggtt atgatccaaa cccaactggt
     1501 acttggggtc ctatcgctgc cttcaacatg tcacgtttcg tgtctgatga aaacactaaa
     1561 ttgttgaatg caatcagctc aacagaatca tttgatgata agaaaaatgt tgagaactat
     1621 aaggcttggc aaaaatatgc ttacgaacaa gcatttgcta ttccaacatt tgaatctgaa
     1681 aaggttacag cacttaacaa acgtgtgaaa aactttgatt ctaactatgg ttcagcttca
     1741 ggaaacggta ttgcttatga gggtatcgaa cttacagctg ataaaggtgt agtagcagaa
     1801 tagtctgcaa gaagacaata gaatttgaaa aagccaactt ggttggcttt tttcagattg
     1861 ctattggaat tttcagataa ttgtggtata gtagactcag tacacaaaaa atgagtcact
     1921 actaacaaaa actcaagatg gatcacatta acctactcaa tttctaattg agtcagtaat
     1981 agggatggtc ttgatttatg attggatata cgtacatttt ttacttctgg gtaaccgcta
     2041 tcaaacgata attgatagaa atatgttatt ctagagtagt tacataaagt cagttaatca
     2101 aacattatat gaacttgata atcgtaagga tattgaattg attgagcttg attagctggc
     2161 acataaagga ggaaaaagcg tggctaccga aaaaccgctt ttagacatta aagatttaca
     2221 cgtcggtttc cgtattggag atgattattt tgacgctgtt gacggtgttg acatctcatt
     2281 gcaaaaaaat gaaattttgg caattgtagg ggaatctggt tgtggtaaat caactttggc
     2341 aacgaccatt atgggcttgc ataacccttt gaataccaaa atcacaggaa gcatccagta
     2401 caatgatatg gaattgattg gtatggatga agccaagtac aatacggtac gtggtaatga
     2461 tattggtatg attttccaag atcccttggc ttctctgaat ccattgatga cgattggtgc
     2521 acagattgat gaggcgctgt tctatcacac tgatttggat gccaatgctc gtacagagcg
     2581 agttttggaa ctcttggctc aggtaggtat tccaaatcct aagcggacat ttaaacagta
     2641 tccacatgag ctttcaggtg gtatgcgtca gcgtatcatt attgcgatgg ccttgtcttg
     2701 taaaccgcca attattattg cggacgaacc gacaacagcc ttggatgtta caattcaagc
     2761 acaaatcttg gatctcttaa atgatattca agcggagaca ggttcgggta ttattttgat
     2821 tacccatgac ttgggagtag ttgcagaaac tgctgatcgt gtagctgtca tgtacggtgg
     2881 tcagtttgtc gaagtagcgc cagtagaaga actctttacc aatccaaaac atccatatac
     2941 acgttcgctc ttgaagtcaa atcctcaatc aggtagcgaa ggaggcgatc ttcatgttat
     3001 tgaaggtatt gtgccgccga ttacaaaaat ggttcgtaag ggttgccgct ttgctccacg
     3061 tattccgtgg attggagcag aggctcatga agagaatccg agcatgcacg aggtaggtcc
     3121 aaatcacttt gttcgttgta cctgccatga gacattctat tttgaagggg aggcctaata
     3181 gtgggattta ttgaagtaaa agatttaaaa gtccattatc caattcgtag tggcttcttt
     3241 aaccgtgtga cggatcatgt ctatgctgtc gatggcgtta atattgagtt tgaagaagga
     3301 aaaacctatg gtttggtagg tgagtcaggt tctgggaaat cgaccattgg taaggcaatt
     3361 atcggtttag agcgtgccac ttctggtcag attatctatg aaggacaaaa tgtaaccaac
     3421 aaatcacgtg gtaaaaaagg aaactttaat cgtgatgttc aaatgatttt ccaagattct
     3481 ctttcaagtt ttaacccgaa aaaacgtatt ttggacatca ttgcggaacc aatccgtaac
     3541 tttgaccgct tatctccaga tgaagaaaag aaaaaggttc ttcatctctt ggatacaatc
     3601 ggtctaaatg aagaagccct gattaaatat cctcatgaat tctcaggtgg tcagcgccaa
     3661 cgtatcggtg ttgctcgtgc cttggctagt aaccctcgtt tgattattgc tgacgagccg
     3721 gtttctgcct tggatttgtc tgtgcaggca caggtcttga actatatgaa acgtatccaa
     3781 gatgagttca agcttagcta tctctttatt tcccatgacc tcggtgttgt acaacacatg
     3841 tgtgatgaat tgtttatcat gtatcgcgga cgtttcgtag agacaggaaa taagaacgat
     3901 atttataata atccacaaca tatttacact aaacgtttgt tgtctgcgat tccaacgatt
     3961 gatccagtca accgtttgaa gaataaagaa aaacgtttgg ctgctgaaaa agagtatcaa
     4021 gaaatgcaag gtcaatacta tgatgaaaac ggtcgtgtgt acgatttgag atccttctca
     4081 gaaactcatc aagtagccct tccagaagga ggtcagaact aagatgtgga aaacagtatt
     4141 acgtcgttta ctcatgatga ttccgcagat tattatcttg agcatcattg ctttctttgt
     4201 tgcgaagatg atgccggggg atccctttac aggattgatt gacccaaata tcgatccagc
     4261 aatcatcgaa caaaaacgga ttgcggcagg ttactatgat ccaatccctg ttcagtattt
     4321 ccgttggatt ggtaatcttt tgcaggggga ttttggtcaa agtatcctct tcaagcaacc
     4381 tgttgttgat gttatcatgc aacgtttaaa caacactatt tggttgtctt tattgacgat
     4441 ggtgttgact tatttgattg ctcttccatt ggggatgatt gcaggtcgtt accaaaactc
     4501 gcttgcagat aaaatcattg gcgtgtataa cttcttgaca ttttcaactc caactttcgt
     4561 ttttgccatc cttatgcttt ggatgtttgg ctttagtttg ggttggttcc caacgcgtgg
     4621 gtcgattgac ggtggtgtag aaggatttgc agccattctc agtcgcttac accatatgat
     4681 tcttccagcg attacaatgg caattttgtc aacaacagta actattcaat atcttcgtac
     4741 ggggattatc gatgcgaaga gccaggacta tgttcgtaca gctcgtgcca aaggtgttcc
     4801 tgagagagtt gtttataacc gtcatatctt ccgtaattct atcttgccaa ttgcatcttt
     4861 cttgggctat gaattgacag gattgattgg tggttctatc ttcattgaaa atattttcac
     4921 ttatccaggt atcggtcagt tattctttaa ctctatttct agtcgtgact atagtgtcat
     4981 cttggctttg ttgttgatat ttggtatggg taccttgttg gggacattga tttcagatat
     5041 tatcatgagt atcgtggatc cacgtatccg tgtgaaatag aaggaggagt aaggtgagta
     5101 aagaaaataa aaaacaagta caatctgctt caactcctcc aggtggcttc cgtgtcatcg
     5161 cgcgggagtt tatgaaggat cgacttgcat tgacttcatt aattatctta gtgacggttc
     5221 tcttggcagt ctttatcgga gcgcttctgt tggatcaaga acaagttatg aaagtcaacc
     5281 ttttgggacg ttacttggaa ccaggtgtta acggctatat cttggggaca gatgaaggtg
     5341 gtaaagatat ctttggtcag ctgattatcg gtgctcgtaa ctcgatcatt atcggtttta
     5401 ccattacgat tattactagt attgttggta tctctatcgg tctgatttct ggttattacg
     5461 gtggtcgttt ggacggattc ttgatgcgta ttgtcgattt catcatgatt ttgccggtga
     5521 ctatgttgat cattgtgttc gtgacagtta tcaagaacta tacaatctat cacttcattc
     5581 tcatcatgag tgccttttat tggacggcca aggctcgtct attccgtaca aggactttgt
     5641 cagaggcaag tttggactat gtaaatgcat caaaaacatt gggaacaagc gactttatga
     5701 ttatgttccg tgaaatttta ccaaacttaa gttcattgat tatcgttaac ttgaccttga
     5761 actttgcggg aaatatcggt atcgagactt cgttgactta tcttggtttc ggtctaccat
     5821 cgacagtacc aagtttgggt accttgattg ccaatgcccg caatgcagat attttggaaa
     5881 acaagacatg gatttggttg ccagcagcca tcttcatcct tgtgatgatg ctctgtatca
     5941 actatgtcgg acaagctttc caacgtgcag cagatgctaa gcagcgttta ggttaattgt
     6001 gaaaagggtt cctttgggaa ctcttttttt gtaaaatccg atgtaacaag cttgtttttt
     6061 acagaaagca gaaaatgtgg taaaatggag tgataaaact atttgaggta acgaattatg
     6121 actgttaaaa tcaatactaa agacggccaa atcgaattga ctgatgacgt gattgccaca
     6181 gttgttggcg gtgctacgac tgagattttc ggtgttgttg ggatggctag taagtctgcg
     6241 atcaaggata attttcaagc acttttgaga aaagaaaatt attctaaagg tgttgtgatt
     6301 aagaccttgg aagatggtcg cattgcagtc gatgtttata ctgtgatgag ctacggtgta
     6361 aaaatcagtg aagtatctcg caacatccaa gaacgcgtta agttcaactt ggaaaatcaa
     6421 ctaggtatct ctgtagatgc cgtcaatgtc tttatccaaa atatcaaagt cgtaggagaa
     6481 taattgtgtc taaaattaca actagtttat ttcaagaaat ggtgcaggca gcatcaactc
     6541 gtctgaataa acaagccgaa tatgtgaact cactcaatgt tttcccagtt ccagatgggg
     6601 atactgggac caacatgggg atgactatta ccaatggtgc taaagaagta gcagataagt
     6661 ctgcttctac tgttggagaa gttgcgcaaa ttctttctaa gggcttgttg atgggagctc
     6721 gtggaaactc aggtgttatt acgtcgcaat tgttccgcgg ttttggtcaa tctgttaaag
     6781 gcaaggttga attggacggt aaggatttgg cgcaagcctt tcaacacggt gtagaagtgg
     6841 cttataaagc cgttatgaag ccagttgaag gtacaattct tactgtttcg cgtggggcag
     6901 ccactgccgc tttgaaaaag gcagaagaga ctgatgatgc ggttgaggtc atgcgtgcca
     6961 ctcttgacgg tgctaatcgt gctcttaaga aaacgccaga gatgcttcca gtcttgaagg
     7021 aagttggtgt tgtcgattca ggtggacaag gtcttgttta catttatgaa ggcttcttgt
     7081 cagctttgac aggtgagtat attgcttcgg aagattttga ggcgacacct gctgttatgt
     7141 ctgaaatgat caatgctgag caccacaagt cagttgcagg tcatgtagcg actgaagata
     7201 ttacctttgg ttactgtaca gaaatcatgg tagctcttcg ccagggtcct acttatgtca
     7261 aggattttga ttatgaagaa ttccgtaact accttaacga ccttggggat tcccttcttg
     7321 tggtcaacga tgatgaaatc gttaaagtcc atgtccacac agaagatcca ggtttggtca
     7381 tgcaagcggg tcttcaatat ggtagcttgg tcaaggtaaa agtggacaat atgcgtgagc
     7441 aacatgaagc tcaggttgag aaagaagaaa gtttccaaaa accggctgaa caaaaagagt
     7501 atgctattat tgcggtagct gctggggaag gtttgacaga aatcttcaaa tcacaaggtg
     7561 ttgactatgt gatttcaggg ggtcagacca tgaacccatc aacagaagat tttgtcaatg
     7621 ctattgaatt ggtcaatgcc cgcaatgtca tcttgttgcc aaataacaaa aatatcttga
     7681 tggctgctca gacggctgct gaagttgcag aagttgcggt taaggttgtg gaaactaaga
     7741 ccctaccaca aggttttact agcttacttg cttttgatcc aagtcgtgat ttggaaagca
     7801 actttgaagc gatgacggca tctctcgcag aggtgaaaag tggtagcgtg acaactgcgg
     7861 tccgcgatac aaccatcgat ggtcttgaaa tccatgagaa tgacaacctt ggtatggttg
     7921 atggcaagat tgtggtttct aatccagata tgatggaaac acttgtcgct acatttgaga
     7981 aaatgctgga tgaggacagc gaaatcgtga ctatctacat cggtgaagac ggtgatgagg
     8041 aactcgctca aactcttgct gaacagctag aagaacaatt tgaagatgtt gaggtcgaaa
     8101 tccatcaagg aaatcaacca gtctatccat atcttttcag cgtagaataa acaaaatcgc
     8161 aggctctggc ttgcgatttt tttctgtcga cttgtctaca atttccagta gacctatgac
     8221 aaactactgg ggctatggta taattaaaga catgtatagt cagaatgaaa atgaattgat
     8281 tgccattggt gagagaattg gaaaagcctg taagccaaat caagttctag tattatcagg
     8341 ggatttgggt gctgggaaaa caactctgac caagggtttg gccaagggtt taaaaattga
     8401 acagatgatt aagagtccta cttatacgat tgttcgagag tatgagggga tcatgccact
     8461 ctatcactta gatgtttatc gaattggaga tgaccctgac tcgattgatt tggatgattt
     8521 tctctatgga ggaggtctaa cggttatcga gtggggagaa ttactggatg tcagtctatt
     8581 tgatgactat ttgctcattc gtatagagaa agagggagat ggtcgacgat tgacagtcga
     8641 atctcatgga gctcaaagta gcgatttagc gaaggagttc caaaatgtct gaaaaagaag
     8701 tgtattttag tgaagctgaa ccagctgatg cagcagcttt tattgatttt atgaatcaag
     8761 ttgctagaga aacggattat ctggtcatgg atgagactgg ttttcgattt agtgttgatg
     8821 aaatggagac catcttcgaa gcaggaatcg aaaatcctcg tgaattgtgc ctgttggcta
     8881 aggttggttc ggaagtcatc ggcgcaattt ctgttaagtc ctctaagcag tttcgcatta
     8941 gccatatcgg aaatattttt attgcagtaa aaaaagccta ctggggtcac ggtctaggga
     9001 cgattttact ggaggaagta ttgcattggg cagaggaaat ggatgtattg aagcgtttgg
     9061 aattaacagt tcaggttcgc aatcaggcgg cagtacattt ataccaaaaa ctaggattca
     9121 acattgaagg aacccagata cgtggggcta gaacagatga aggagaatgg cttgatcttt
     9181 attatatggg caagttaatt ggtgaagtat gacaattgga aaaaaaatat tcttaatgtc
     9241 tttggctatt gttggtttaa cactaggtgc cggcttaata tatggggcca gcttgttaaa
     9301 tttttctaca ggtactattt caaaaaccta taagcagcta gatggagaaa aagaaatcac
     9361 tcctattgat gcgacagagc ccctaaccat cctactgatg ggggtggata tggaccaagc
     9421 gacccgcggg ggagattggg agggtggccg tagtgattcg atgattttgg taactgttaa
     9481 tcccaagact aaggaaacca atatgatgag cttgactcgt gatattatgg ttgagattgc
     9541 agaagcgaat ggggagtctt caggaacggt tgaaaaacta aatcattctt atagctacgg
     9601 acaggcaccg atggccattg ccacgatcga aaagatgatg gatattaaca ttgaccgtta
     9661 tatcgaaata aatatggatg gtctgattga gcttgttgat gcggttggag gtattgaggt
     9721 aaacaatact cttggcttcc ctatatccat ttcagaacat gagcctgcct acacctcgat
     9781 tgtccagccg gggaaacagt tggtaaatgg ggatcaggcg ctggtttatg ctcggatgcg
     9841 ctatgatgat cctgaggggg atatcggacg tcagagacgc caacgagaag ttatcacggc
     9901 tattataaaa aaactcctcc agttagatgg tttgacgcag tataagaaga ttctgaccgc
     9961 catctccaat aatatgcgaa ccaacattga gattagtcct gcgacaattc caagcctctt
    10021 ggggtataaa gactcggtct ctaagttgaa ttcctatcag ttgcgcggtg tggaccaaat
    10081 ggttgatgaa atctattatc aattaccaac cagtacacat ctattggaaa tgcaaaatat
    10141 tttgaaaaaa tctatcggct tagaagaaaa taccgactta gtcacaaacg tgaaggtcta
    10201 cgaaggacag atgggattgc caagtccaat aaacgtttat gatgtatata caaatctctt
    10261 gctgttagaa gcaagtccat gggcagaaag cttggatcca gaaataggga gtccatcggc
    10321 tactacgact gtgacaacag aagagcaggt aaccgatttt tcaacagagc cagtactcgg
    10381 tgatgaaaac gggtcacaat aatgtagtca ttcagttttt cttttattac tttgacgagc
    10441 gagtactaaa agcctataaa aatagaggtt gcaaacaacc tctattttta tatatttgga
    10501 aattccctat gtcagggagt gctattctca ttctggtatt ttttgagaac ctgttggatt
    10561 tcttccaagt ttcctgcaat actttgctga tagactcgag tcttatattg taagtcagaa
    10621 gccatttcct gcaagggttc ttgaaaactt tggataatgg caagttgttc ctggatattg
    10681 tccttgctca gttgaatatc tgatagaagt tgtttggttt cctttatttc tttggtaatt
    10741 ttatcccgat gcgtgactgc aaggaagctg gcggtagcgg cgcttacggc taaaatgata
    10801 ttacgaagtt tcatattatt ctcctagata gagctcttgt gccagttgag ccagggctgg
    10861 gaagtcaggg tcgttggttt taaattgaat gctcaatcca tcttgattgt taaagcgtgg
    10921 taagaggtgg atgtgtgtat gaaagacggt ttgcccagcg gcctcctcgt tattattaac
    10981 gatgtttaga ccactagctc caagtttttc ttttaactga cgagcgatgg ttggcacaac
    11041 agaaaagagt gtggctgcag cttctttatc catatcaagc acgttttggt agtgtttttt
    11101 aggaacaacc aatgtgtgtc cttttgtgac ctgagtgatg tctaaaaagg ctaatacttg
    11161 gccatcttcg tagacttttg aagctggtat ttctccagag ataattttgc aaaaaataca
    11221 atccgacata atggcaacct ctttctagga tttttgttat aataattata tcaaattgta
    11281 ggaagaaatg tatgttagaa gtaaaaaatg taactggagg atatgtcaat atcccagttt
    11341 tgaaagatgt atcttttacc gttgaggatg gtcaattagt tggtctaatt ggtttaaatg
    11401 gtgcagggaa atcaacaact attaaggaaa ttatcggtct tttgaccccc tatcaaggac
    11461 agattgcaat tgacggccta actttgctgc aaggggctga aaattatcgg aagaagattg
    11521 ggtttatccc tgaaacacca agtttgtacg aagaactaac cctcaaagag cacttggaag
    11581 tggtagcaat ggcctatgat ttatcttggg agcaagcatg gggacgtgtt gagcacttgt
    11641 taaaactgtt tcgcttggat gagaaattgg actggtttcc tgtcaatttt tcaaagggaa
    11701 tgaagcagaa ggtcatgatt atttgtgctt ttatggtgga gccgagtctg ttgattgttg
    11761 atgagccttt tctgggatta gaccctgtgg ctatctctga cttgatcgct cttttggagg
    11821 aagaaaaatc taagggcact tcaatcctca tgtccactca cgttcttgac tcagctgaga
    11881 aaatgtgcga ctcttttgtg attttacatc agggacaggt tcgtgcaact ggaaatttgg
    11941 aggagctaca aagcgcattt ggtatggatg gtgcaagtct gaatgaaatt tatctggcct
    12001 tgacgcaaga aggagtggct ggatgaaaga attgtttcaa caacgccgaa tagatttttt
    12061 aaatcgttgt tccaagtatc tgcgctatat tctgaatgac cattttgttt tggttctcat
    12121 ggttttgtta ggatttttga gtttgcaata ccgtcaatta ttgttgtcat tccctgagaa
    12181 tccgttgccg attgtttttg tggttattgc aatcagtcta ctggtactat tgtccggaag
    12241 aattgcgact tatttagaag aagctgatca aatcttccta ttgaccaagg aaaaagacat
    12301 tctgcaagga ctcgaggttg cagctagacg cacggtcttg ttttggtcct ctatacaggt
    12361 ggtggttcag cttgttttgt taccaatcta tttgaaactg ggtttaccgg tgtggatgat
    12421 tgtagctggt cttcttactt tgttggtttt aaaatgtctt tttgtcaagc gccaattagt
    12481 ggcttatcag tcacagggag tattggactg gtctaaggct attcaagatg aacaaaaaag
    12541 gaaacagtct attttacgtt tctttgcctt atttacgacg gttaaaggga tcagtacgac
    12601 tgttaaaccg agaagctatc tcaatggaat cttgcgtctc gtcaagtcga gacagacttg
    12661 gttttatctc tacttacggg ctttcttgcg ttcaggagac tacttgggct tgacgatacg
    12721 tctactgttg ttggcgattt tgtccctatt tgccattgaa gaatcgtggt tatccatcgg
    12781 cctagtttta gtctttcatt atttgcttgt cttccagttg ttggggcttt acaaacatta
    12841 tgattatcaa tatgtaacac aactgtaccc tctggagaaa gattccaaga aaatcggtct
    12901 tcagaatttg cttagagtga ttttatatag tctattactg gtggaattgg gctttgctct
    12961 gctattttct aaagagaata cgatggtagt cgtcttactt ctcgtgggga ttttcttgca
    13021 tgaaatatat ttgcctctaa aattaaaaaa attgattgac taaatagacg aaaattagta
    13081 aaatagtaag gaatttttaa aggaggaaag gcatgcagtt tgataccagt gggctacaat
    13141 tacagtctat tgcaggaaat agtggcaaag cgtttaaagg cctacggtca gacggaacgc
    13201 cagtctttgt gaagtatgag atgcctccga tagtgtctgc tcttgcgcgt gagcaaatta
    13261 caccacccgt tttgtcagca aatcgtgaag taggaatggg acatcgtgta gagcaggaat
    13321 ggttgaatgg tcgtaccttg gagcgtcagg atatgactag taaacagatt cgtcaaatac
    13381 tggtgagaat gcactattct cgtattttgc tcaatcaggc tttgcagatg aattatacct
    13441 atatggaacc tcaggatttg gtttatcgtt ggcaaaaaga ggcgccaact agattgggac
    13501 agaattctta tctgcaatct atctgtcaag atttattgaa taatctacca agattccgtc
    13561 aagaggtggc aacatttgtt cacggagatt tgcatcatag taactgggta gaaacgacgt
    13621 ctggtttggt gtatttgaca gattgggaga ccgcttgtgt aacggatcgg atgttggatg
    13681 ttgcctatat tttgacgcat tatattcctc gtcagtcctg ggaagagtgg cttcgggctt
    13741 atggctacaa atataacagc acagtattaa ataaggttta ttggtatggc cagcttggct
    13801 atctaaacca aatagctaag catgtagaaa gctacaatgt tttggctgca aataaagaaa
    13861 tttatgctct acggcaattc cgtcagagtt tctataagga agtatgagag ttagaaatcg
    13921 taagggagcg agtgagcttc tagcaaacaa tccccagtat gttatctcca atccagagga
    13981 gtgtaagggg aaatgggcag agatttttgg aaacaataat cctatccaca tagaagttgg
    14041 ttctggtaaa ggtcgctttg tcactggtat ggctgcgcaa aatccagata ttaactatat
    14101 tggtattgat attcagatga ccgtgttaag ctatgccttg gaccgtgtgc ttgaagctgg
    14161 cttaccaaat ataaaattat tgcaggtgga tggttcgagt ttgaccaact attttgcacc
    14221 ggcagaaata gatcagcttt atctgaattt ttcagatcca tggcctaaga aacgtcatga
    14281 gaaacgccgt ttgacctaca agtcattctt ggatacctac aaggaaatcc tacctgagaa
    14341 gggagaaatc cacttcaaaa cagataatcg tggtctgttt gagtatagcc tggctagttt
    14401 ttctcaatat ggcatggtct tgaagcaagt ttggctagat ttgcatgcgg atggtttgga
    14461 aggcaatgtt atgacagagt atgaggagaa attctcaaac aagggtcaag tcatctatcg
    14521 tgtggaagca cagtttcaat aattccctta gtggaaaatg aggagaggtc taacagagac
    14581 ctttttcctt tgtcgaataa actatagtca ttcagttttt cttttattac ttcgacgtaa
    14641 gaggaaactc cgtttcctta tttcaaactt caaacactcc actggattgt ttgaactcgc
    14701 tttgccgtac tctgcagggg tgacttgctc cacaagtgct atctccaacc tccaaaggtt
    14761 ccccgaacct ttggagcgag tactaaaaga ctataaatgt ctataatcca tcgttttcct
    14821 ttacaaatag ggatagatat gatagaataa tggaagtgaa taatgagaaa aggggttggc
    14881 gtcagtcaac cc
//
LOCUS       DBNFCX010000053        14752 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.053, whole genome shotgun sequence.
ACCESSION   DBNFCX010000053 DBNFCX010000000
VERSION     DBNFCX010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 14752)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14752)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14752
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.053"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            951..5795
                     /locus_tag="AC1PJC_001441"
                     /pseudo
     CDS             951..5795
                     /locus_tag="AC1PJC_001441"
                     /inference="COORDINATES: protein motif:HMM:NF016196.6"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 family protein"
     gene            5934..6047
                     /locus_tag="AC1PJC_001442"
     CDS             5934..6047
                     /locus_tag="AC1PJC_001442"
                     /inference="COORDINATES: protein motif:HMM:NF012948.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009986 - cell surface [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HIP6620427.1"
                     /translation="MPNTGEQSSAWAGILGAGLLLGGLYKRRRQNKEEEED"
     gene            6151..7149
                     /locus_tag="AC1PJC_001443"
     CDS             6151..7149
                     /locus_tag="AC1PJC_001443"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004192896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006486 - protein glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HIP6620428.1"
                     /translation="MKVLLYLEGKTVLEKSGIGRALQHQMEALDMAGIPYTTDLLGDY
                     DVIHINTYGPRSWLLLHAAKRSGKKVIMHGHSTKEDFQNSFIGSNTLAPFVGKYLASM
                     YQKADFVITPSEYSKKLIQSYGVTTPIIAVSNGIDLDKYKKDERKEAIFREHFKIEEG
                     QPVVVCAGLYFRRKGIEDFVKVAEKMPHVRFIWLGSINKWLIPSYIRKIVEGDHPANV
                     EFPGYFKGAVFQGAMSGADAFFFPSYEETEGIVVLEALASHQHVVLRDIPVYDGWIDE
                     NVAELGHTVDDFVDSIQKILDKQVDKREAGYQVAVSRSIDNVSHQLVDAYRQVLEM"
     gene            7150..8463
                     /locus_tag="AC1PJC_001444"
     CDS             7150..8463
                     /locus_tag="AC1PJC_001444"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006486 - protein glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HIP6620429.1"
                     /translation="MRIGLFTDTYFPQVSGVATSIRTLKTELEKLGHTVFIFTTTDED
                     VNRYEDWDIIRIPSIPFFAFKDRRVAYAGFTDALKIASRYKLDIIHTHTEFSLGILGK
                     MIAKELDIPVVHTYHTQYEDYVHYIAKGRIIRPGMVKYLVRAFLKDLDGVICPSEIVE
                     DLLMSYNVPISKRVIPTGIDLAKFDRPEIGKDETDELREQLGIASDETMLLSLSRISH
                     EKNIQAIVQAMPKILLENPKVKLVIVGGGPYTDDLQEMIAELNLDEHVQLTGMIAPSD
                     TALYYKAADFFISASTSETQGLTFLESLASGTPILAHSNPYLKNVITDKMFGTLFIRE
                     QELADAVVEAIVATPPMNPYVLDKKLYEISSTNFGGKVFEYYLDLKISYDFRKEHTNQ
                     DSVAEALIKEAIYLPQKVVVKSTDTTAKILKKSVEQVKSIRNFFE"
     gene            8478..8852
                     /locus_tag="AC1PJC_001445"
     CDS             8478..8852
                     /locus_tag="AC1PJC_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620430.1"
                     /translation="MEKLRKESWKNLVLATLIILSMYAGIYLIAFHLISDTMLSKELV
                     VGNILLYTPIVLFLTGLLYGFFHGFSPSLLALVLLLYPVTIFFFKEWIILYQIVYTLC
                     ALIGNGVGALLFSLRKKMRKNP"
     gene            9115..9444
                     /locus_tag="AC1PJC_001446"
     CDS             9115..9444
                     /locus_tag="AC1PJC_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MazG-like protein"
                     /protein_id="HIP6620431.1"
                     /translation="MKLTSIPQETIDRCLAIRKAYRELEVKHHDKEWSIEEDLLALTN
                     DIGNMNRLIMTKQGRYYDETPYTLEHKMAENIWWLIELADRLDIDIQKEMETFLAQKE
                     ELLGIKK"
     gene            9595..11547
                     /gene="thrS"
                     /locus_tag="AC1PJC_001447"
     CDS             9595..11547
                     /gene="thrS"
                     /locus_tag="AC1PJC_001447"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HIP6620432.1"
                     /translation="MLKITFPDGAVREYQAGVTTFEIAESISKSLAKKALAGKFNGKL
                     IDTTRAIEEDGTLEIVTPDHEDALDILRHSAAHLFAQAARRLFPDIKLGVGPAIQDGF
                     YYDTDNAAGQISNEDLPRIQEEMMKIVKENFPSERREVTKEEALEIFKNDPYKLELIQ
                     EHSDDEDGLTIYTQGEYVDLCRGPHVPSTGRIQIFELLNVAGAYWRGKSENPMMQRVY
                     GTAWFDKKDLKAYLQMREEAKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRT
                     LERYITDKELASGYQHVYTPPLASVELYKTSGHWEHYSEDMFPTMDMGDGEEFVLRPM
                     NCPHHIQVYKNHVRSYRELPVRIAELGMMHRYEKSGALTGLQRVREMTLNDGHIFVTP
                     EQIQEEFKKALQLIIDVYADFNLNDYRFRLSYRDPEDKEKYYDNDEMWENAQRMLKGA
                     MDEMGVNYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFGLTYIGADG
                     EEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPTQVTMIPISVEAHLDYAWKVA
                     KELQDRGVRVHVDERNEKMQYKIRQSQTSKIPYQLIVGDKEMEDNAVNVRRYGSKATQ
                     TQSVSEFVDHILADIARKSRPAEAAE"
     gene            complement(11619..12278)
                     /locus_tag="AC1PJC_001448"
     CDS             complement(11619..12278)
                     /locus_tag="AC1PJC_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000443867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HIP6620433.1"
                     /translation="MNYVLELLKPSTFQLLWSGLKLTLYISSISVVLSVLFGMILAIM
                     RNGKNPLFKWIATIYIEFVRNVPNLLWIFTVFLVFQMKSTPAGITAFTIFTTAAMAEI
                     IRGGLNAIGPGQTEAGLSQGFTPVQIMVYIIMPQAIRKMLPAIISQIVTVIKDTSFLY
                     SVIALQELFGSSQILMGRYFEAEQVFALYLMVALIYFSINFAISSLSRYVAKSWASSI
                     E"
     gene            complement(12293..12991)
                     /locus_tag="AC1PJC_001449"
     CDS             complement(12293..12991)
                     /locus_tag="AC1PJC_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HIP6620434.1"
                     /translation="MTVLTTSPYAWENWVSYFKDFPTFFQGFLFTLAISVGAFIMAMF
                     LGIVFGSLSSSKNKVLKIIARIYVEYYQNTPLLVQFMIVYYGLPLISNYVLMPSIYWT
                     AVICVGLYHGAYIAEVIRAGIEAVPTGQTEAALSQGFTQSETMRIIILPQAIPTILPP
                     LTNQVVNLIKNTATVAIISGADIMFMTKSWSAMNANYIPAFAGAAFLYFIMCFPVASW
                     GRRIEEKNKSAFSH"
     gene            complement(13006..13845)
                     /locus_tag="AC1PJC_001450"
     CDS             complement(13006..13845)
                     /locus_tag="AC1PJC_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HIP6620435.1"
                     /translation="MDKKKINIFFAIILLVFGLILLVFAKQPVAQTETPASITNSNQV
                     QAIIDRGVLRVGVKQDVPNFGYKNPDTGEFEGMEIDIARKIADELGVDIEFTPVTAQT
                     RGPLLDNGQVDMVIATFTITEERKLLYNFTTPYYTDAVGFLVNKDSGIKTFTDLDGKT
                     IGVAQGSITRTLISELADKYGITVSFAELGSYPELSVSLRAHRTDAFSVDQSILSGYI
                     SSKSELMDFSFSASDYGIVTKLSNKDLNDYLNSLVEKWTADGSLQSIYDANGLKPVTE
                     TDE"
     gene            complement(13856..14617)
                     /locus_tag="AC1PJC_001451"
     CDS             complement(13856..14617)
                     /locus_tag="AC1PJC_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015424 - ABC-type amino acid transporter
                     activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HIP6620436.1"
                     /translation="MALVEFKDVNKYYGDYHALRNINLEFEPGQVVVLLGPSGSGKST
                     LIRTINGLEAIDEGTLIVNGHDISSTSIKELVSLRKEVGMVFQHFNLYPHKTVLENVT
                     LAPIKVLGIDKATAEKTAQKYLEFVNLWDRKDSYPAMLSGGQKQRVAIARGLAMKPEL
                     LLFDEPTSALDPETIGDVLAVMQKLARDGMNMIVVTHEMGFAREVADRIIFMAEGEVL
                     VDTTDVNGFFDNPTEPRAQQFLSKIINHESDKVKL"
BASE COUNT         4237 a         2966 c         3299 g         4250 t
ORIGIN      
        1 ctttctaaaa tttaattaca atgttaaaat aatgacagat aatattgcaa aataatttta
       61 gggaataata tcaaggaggt attccaatgg gcagtaatga agatggaagg cgaagtgttg
      121 aactgattaa ggagaccaag attcgtcttc acaaggtaaa aaagaagtgg ctatgcagag
      181 tgacacgtct tattcgcaaa cgaaggttga ccagagattt ggatggtatc agaatttcaa
      241 gtccgtcgat aacaaaggga atagtgtcca taggggcatt gttgagtggt gtagcgacag
      301 agcatgcttt gactgaggat gttgtatatg cgtcggaata tacagaagaa acagcactgg
      361 caatgactga tgaagttgta atggacacgg ttgtgtcgga gaatgctgga ggtatactca
      421 atgaaagtca gtctcttgaa tcggtaaata cagatcctcc aatggagaag gtagtggagg
      481 agaccagtga agaaggtcct ggaagttcgg aggaagttgt acataatgta tctgaggaag
      541 tgatggaggt tattaatgac gtatctgaag aagcggaaat ggtttctgtt cggagagata
      601 ctagtcgatt agaagaagtg atagcttcta ttaaagttgc acttgctgag ttggttaacc
      661 cgggggaaca tattgaatcg caagcatata aggactacct ggcagctcgt acacacttgg
      721 aagaagtatt gaaacaagct gaacaacttt tgcaagataa gagtcggaca caagaggaat
      781 tggatcaagc tgttttggag tatggtcagg atgcgataga agtgactcgg ctagcagaac
      841 attttaaaga ctattctgca atggtcggta gtggttttag aaggttgact agtcaggagc
      901 ttgtaaagag tagctctgta aacttggata ttccatctaa ggttgagccg atgggagcat
      961 cgggtggtca acttcgtgct attgtcaact tttcacttaa tgatttggcg acagctggag
     1021 atcaatttac tgtatctttg tccccaaact tgaacttatc cggtagtgga atgccggcgg
     1081 atgtgaaaat ccccaatatt gttgcggaag gaaaaattat cgcaacagga acttgggacc
     1141 atgaatctag gacaattctt tacacgctaa atgaaaatgt caataatcta tcctcggtta
     1201 gtggatccat ttcactctct attttcgtag accagaaagt tgtacagaat gaaggaaatc
     1261 aaaaatttac agtctacgtg aataaccagt accaggctag tcgagatgcg aacgtcgagt
     1321 attctaatcc aacaagtagg tacgatggtt cctattctat tcgtgcattt ttgacgaatt
     1381 taaatctgac tgaggggacc tatgaccatg tcatctattt gaatgaaaat ggtaagaata
     1441 actatggtac caatgaaatc ttgcaaatcg tttctaatgg tgcttcgtat ttttctgacg
     1501 cagttactac aattcgtgct tatcgtgtac ctgtggggca gtttatcgac agtatggaag
     1561 gagatttctc gaagtatacg gaaattacca gtcgtattac ttctagattt gctgcaaatg
     1621 gtcaatggtt acgtctcaat ctaggtagtc aaacgggatc gccattgcta cttgttatta
     1681 gtagcagagt ggatgcgaat tcaaccatga atttgtcaac ggaaacaacc tatgcgaaca
     1741 gcttgatgaa tactggtgca gtgtggacca acacgaatta catgttctca aatgctgcaa
     1801 ttgccagggg tgaatacaat tctacctcta tatcgttatc cacttctgag tcaatatcta
     1861 catctattag tgagtctatc tttgaatcta cctcagagtc catttctact tcagagtcgg
     1921 agtcgattat tcgatccgct agtgagtctg tctccgaatc agttcgtgag tctgtatcag
     1981 agtcagttcg tgaatctgta tccgagtcca tctctgaatc ggttcgcgag tcgatttccg
     2041 agtccttatc cgaatcagtt cgtgaatcgg tttctgagtc tgtatccgag tcggtcagcg
     2101 aatccatttc tgaatctaca tccgagtcca tttccgagtc agtaagtgag tcgatttcag
     2161 aatccgtatc tgaatctatc tccgagtcgg taagtgagtc cctttcagaa tcagtaagtg
     2221 agtcgatttc agaatcagtc tcagaatcta tctctgagtc agtcagcgag tcgatttcag
     2281 aatccgtatc agagtctatc tccgagtcag tcagcgaatc aatttccgaa tcagtttctg
     2341 aatctatctc cgagtcagtc agcgaatcga tttcagaatc tatctcagaa tctatctcag
     2401 aatctgtatc tgaatctatc tccgagtcag tcagcgaatc gatttcagaa tccgtatcag
     2461 agtcaatttc cgagtcagtc agcgaatcca tttctgaatc tgtatcagag tcaatcagtg
     2521 aatcagtttc agaatcagtt tcagaatcag tttcagaatc agtatctgaa tcggtaagcg
     2581 aatcgatttc agaatccgtc tctgagtcaa tctccgagtc ggtcagcgaa tccatttctg
     2641 aatccacatc cgagtccatt tccgagtcgg taagtgagtc tatttcagaa tcagtatctg
     2701 aatctatctc tgagtctatc tctgagtctg tatctgagtc agtttctgag tctgtatccg
     2761 agtcggtcag cgaatccatt tctgaatcta catccgagtc catttccgag tcagttagcg
     2821 agtcgatttc agaatccgta tctgagtcaa tctccgagtc agtgagtgaa tccatctctg
     2881 aatccatctc tgaatctgtc tcagaatcta tctccgagtc agtaagcgaa tcgatttcag
     2941 aatccgtatc agagtccatt tccgagtcag taagtgaatc catctctgaa tcagtctcag
     3001 aatccgtctc cgagtcagtc agcgagtcga tttcagaatc cgtctccgag tctatctccg
     3061 agtcggtaag cgaatcgatt tcagaatcta tatcagaatc cctctccgag tcagttagcg
     3121 aatctatttc cgaatcagtc tcagaatccc tctccgagtc agtcagcgag tcgatttcag
     3181 aatccgtctc tgagtcgatt tccgagtcag taagtgaatc aatttcggaa tccacatctg
     3241 agtccatctc cgagtcggtc agcgagtcga tttcagaatc tgtatctgaa tcaatcagcg
     3301 aatcagtttc tgagtcaatc tctgagtcag tttcagaatc cgtatccgag tcgatttcag
     3361 aatctgtatc agaatctatc tctgaatcta catcagagtc catctctgag tcagtaagcg
     3421 aatcgatttc agaatccgtc tctgaatcta tctcagagtc agtaagtgaa tcaatttcag
     3481 aatctgtatc agaatctatc tctgaatcta catcagagtc aatttccgag tcagtaagcg
     3541 aatctatttc tgaatctaca tcagagtcta tctctgagtc agtaagcgaa tcgatttcag
     3601 aatctgtatc agaatctgta tcagaatcta tctctgaatc tacatcagag tccatctctg
     3661 agtcagtaag tgaatcgatt tcagaatctg tatcagaatc aatcagcgaa tccgtctctg
     3721 agtctatctc cgagtcagta agtgaatcaa tttccgagtc tgtatcagaa tccgtttctg
     3781 aatctctctc tgagtcggta agtgagtctc tttcagaatc cgtctctgag tcaatttccg
     3841 aatcagtctc agaatctatc tcagaatcgg tcagcgagtc gctttcagaa tcggtatctg
     3901 aatccatctc tgagtcagtc agcgagtcga tttcagaatc tacatctgag tctctctccg
     3961 agtcagtgag cgagtccatt tcagaatcag tcagcgagtc catctcagag tcagtgagcg
     4021 aatcgatttc agaatcagtt tctgagtcaa tttccgagtc agtgagcgag tcaatttctg
     4081 aatccgtatc tgaatctctt tccgagtcgg tcagcgaatc gatttcagag tctacatcag
     4141 aatctatctc agagtcagtc agcgaatcca tttcggaatc cgtatctgaa tctatctccg
     4201 agtcagttag cgaatcgatt tcagaatcta catctgaatc aatttcagaa tcggtatctg
     4261 aatccatctc cgagtcagta agtgagtcaa tttcagaatc tgtatctgag tccctttcag
     4321 agtcagtgag cgagtcgatt tctgaatcta catcagaatc tatctcagag tcggtaagcg
     4381 agtcgctttc agaatcagtt tctgagtccc tctccgagtc agtcagcgag tcgatttctg
     4441 aatccgtctc agaatctatc tcagagtcgg taagcgagtc aatctctgaa tctacatctg
     4501 agtctctctc cgagtcagtc agcgagtcga tttctgaatc cacatctgag tctctctccg
     4561 agtcagttag cgaatctatt tctgaatccg tctcagaatc tatctcggaa tccgtatctg
     4621 aatccatctc agagtcagta tcagaatcaa tttcagaatc tgtatctgag tccctttccg
     4681 agtcgatcag cgagtcaatc tcagaatccg tatctgagtc tatctcagag tcagtgagtg
     4741 aatcgatttc tgaatctaca tctgagtctc tctccgagtc agttagcgaa tctatttcgg
     4801 aatccacatc tgaatcaatt tccgaatcag tatcagaatc tatctctgaa tcagtcagcg
     4861 agtcgatttc tgaatccatc tctgagtctc tctccgagtc ggtaagcgag tcaatttccg
     4921 aatccgtctc agaatctatc tcagaatcag taagtgaatc catttcagaa tccgtatctg
     4981 agtccctctc cgagtccctc tccgagtcgg taagtgagtc cctttcagaa tctgtatctg
     5041 agtcaataag tgaatccgtt tcggaatcta catcagaatc aatctccgag tcagtcagcg
     5101 aatccctttc cgaatccgtc tctgagtctc tctccgagtc agttagcgaa tctatttcag
     5161 aatcggtatc tgaatcaatc tccgagtcag tcagcgagtc cctttcagaa tccgtatctg
     5221 aatccctttc cgagtcagtc agcgagtctc tttcagagtc catctctgag tcggtcagcg
     5281 agtcaatttc cgaatcagtc tcagaatcta tctccgagtc agttagcgaa tcgctttccg
     5341 aatccgtctc tgaatccctc tccgagtcga tcagcgaatc gctttccgaa tcagtctctg
     5401 agtcagtcag cgaatcgatt tcagaatccg tatctgaatc catctcagaa tcagtatcag
     5461 aatctatctc tgaatcggta agcgaatcaa tttcggaatc tacatcagag tcaatttcag
     5521 aatccgtatc agaatccatc tcagaatcgg taagtgagtc tctttcagaa tccgtctctg
     5581 aatctatctc agaatcagta agcgaatcaa tttcagaatc tgtatcagaa tctatctctg
     5641 aatctacatc agagtccatc tctgagtcag taagcgaatc gatttcagaa tccgtctctg
     5701 aatctatctc agagtcagta agcgaatcga tttcagaatc cgtctctgaa tctatctcag
     5761 agtcagtaag cgaatcgatt tcagaatccg tctctgaatc tatctcagag tcagtaagtg
     5821 aatcaatttc agaatcagta tctgagtcta tctcggaatc agtctcagaa tccatttccg
     5881 agtcagagtc aaccccgtct cgtcaatctc aaactccgcg tagacaaggt gcgttgccaa
     5941 atactggtga acaatcatca gcttgggcag gaatccttgg agcaggtctc cttcttggcg
     6001 gtttgtataa gagacgcaga cagaataagg aggaagaaga ggattaattc tctgaaaaga
     6061 agaaaaatta gctagtttcg gctggctaat ttttttgata gaatacagtt taaaatatga
     6121 aaaaatgtaa aaaagggcta taatggtatt atgaaagtac tattgtattt agaaggtaaa
     6181 actgttttag agaaatcagg aattggccgg gcgcttcaac accagatgga agcgctagat
     6241 atggcaggca ttccttatac gacagacctg ctgggagatt atgatgtcat tcatatcaat
     6301 acctatggtc cacgctcctg gttattgcta catgcagcca aacgaagtgg aaaaaaggta
     6361 attatgcatg gacattccac gaaggaagat ttccaaaatt cctttatcgg ttcgaatacc
     6421 ctagctcctt ttgtggggaa atatctagca agcatgtacc aaaaggcaga ctttgtcatc
     6481 actccttcag agtattcaaa aaaactcatc cagtcttacg gtgtgacaac gccaattata
     6541 gccgtttcga atggtattga tttagataaa tataagaagg atgaacgtaa ggaagcaatc
     6601 tttcgagagc attttaaaat tgaagaaggt cagccagttg ttgtctgtgc aggactttac
     6661 tttcgacgta aaggaattga agactttgtc aaggtagccg aaaagatgcc acatgtccgc
     6721 ttcatttggc tcggttcaat caataagtgg ctgattccgt catatattag aaaaattgtt
     6781 gagggagatc atccagcgaa tgtcgagttt ccaggctatt ttaaaggtgc tgtttttcaa
     6841 ggtgcaatga gcggagcgga tgcctttttc ttcccatcgt atgaggaaac agaagggatt
     6901 gttgttctgg aagctcttgc tagtcatcag catgttgttc taagagatat tccagtttac
     6961 gatggttgga ttgacgaaaa cgttgctgaa ttgggacata cagtggatga ttttgtcgat
     7021 tctattcaga aaatcttaga caagcaggtt gataaacgtg aggcgggcta ccaggttgcg
     7081 gttagtcgct cgattgacaa tgtttcccac caattggtgg atgcctatcg acaagtattg
     7141 gagatgtaaa tgcggattgg attgtttacg gatacctatt ttccacaggt ttcaggagtc
     7201 gcgacttcga ttcggactct taagacagag ttggagaaat tgggacatac ggtatttatt
     7261 tttacgacga cagatgagga tgtgaatcgc tacgaagatt gggacattat ccgaattcct
     7321 agcatacctt tttttgcctt taaagatcgt cgagtggcct acgcaggttt tacagatgcc
     7381 ttaaaaattg caagtcgcta taaactagat attattcata ctcatacaga attttctttg
     7441 gggattttgg ggaaaatgat tgccaaggaa ctagatattc cggtggtaca tacttatcac
     7501 acccagtatg aagactacgt acactatatt gccaagggta ggattattcg tcctgggatg
     7561 gttaaatatt tagtacgggc atttttaaaa gatttggatg gggtaatttg tcctagtgag
     7621 atcgttgaag atcttttaat gagttacaat gttccgattt ctaaacgagt aattccgaca
     7681 gggattgact tggcaaagtt tgatagacca gaaattggca aggatgaaac agatgagttg
     7741 cgggaacagc taggaattgc tagtgatgaa acgatgttgt taagtctgtc taggatttct
     7801 cacgagaaga atatccaagc aatcgttcag gcaatgccaa aaattttgct ggaaaatcca
     7861 aaggtgaagt tggtcattgt cggaggtgga ccttatacag atgatcttca ggaaatgata
     7921 gcggagctta atctagatga acacgtccag ttgacgggaa tgattgcacc aagtgataca
     7981 gcactttatt ataaagctgc ggatttcttt atttctgctt cgaccagtga aacacaggga
     8041 ctaactttct tagaaagctt agcttctgga actcctattt tggcacatag caatccctat
     8101 ttaaaaaacg ttataacaga taagatgttt gggactctct tcattcgaga acaggagttg
     8161 gcagatgccg tcgttgaggc gattgttgct acgccaccaa tgaatccgta tgtgcttgat
     8221 aagaagctct atgagatttc ttctacgaat tttgggggca aggtttttga atattatcta
     8281 gatttgaaga tttcgtatga ttttagaaaa gaacatacta atcaagatag cgtagcagaa
     8341 gcattgataa aagaggctat ttacctaccg caaaaagtag tagttaaatc aacagacacg
     8401 acagcaaaaa tattgaaaaa atcagtcgaa caagtaaaat caatccggaa tttctttgaa
     8461 taatttggag gtttcaaatg gaaaagcttc ggaaagagag ttggaagaat ctggttttgg
     8521 caactcttat tattctgtcc atgtatgcag gtatttatct gattgccttt catctgatta
     8581 gtgatactat gctttctaag gaactggtgg ttgggaatat attgctctat actcccattg
     8641 tgctattcct aacaggtctt ctttatggat tttttcacgg tttttctcct agccttcttg
     8701 ccttggtttt actgctttat cctgtaacca tctttttctt taaggaatgg attattctct
     8761 atcagattgt ctacacctta tgtgctctga ttggaaatgg ggtaggagct ctgctatttt
     8821 ctctaagaaa gaaaatgagg aaaaatcctt gaaaaatcag gaaatcctgt tataatagct
     8881 tttagagact tatcaattct aggaaatctt tgagagagtg tgcggtgggt gcaagcacat
     8941 agaggatagg attgacacta ctcggtatga ttttatgcaa acataaaagg gtggttccct
     9001 tatcgccaat ctgaggtagt caggcttttt agcgtgactg cgaatgaagg tggaaccacg
     9061 ttacgacgtc cttttgtgag ggcgtcgtat tttctttttt gacaaaataa ggagatgaag
     9121 ttgaccagca ttccacaaga aacgattgac cgttgcctag ccattcgcaa ggcttacaga
     9181 gagttggaag tcaaacacca cgataaagag tggtccattg aggaagatct cttggctttg
     9241 accaatgata ttggcaatat gaaccgtctg attatgacca agcaggggcg ttactatgat
     9301 gaaacgcctt ataccttgga gcataaaatg gctgaaaata tctggtggtt gattgaatta
     9361 gctgaccgcc tagatattga tattcaaaaa gaaatggaaa cctttttagc tcaaaaagaa
     9421 gagttactag ggattaaaaa ataaaaaata gaaaggacta gggtctccgt atttggttga
     9481 actgaatacg ggctacggac tgggccaaaa agataaacga gaactagacg cttgcgtcgt
     9541 cgttcagttt cctattttgt ctgtgtccgc ttaacgccct ttatatctta tattatgtta
     9601 aaaattactt tcccagatgg tgctgttcgt gagtaccagg caggcgtgac gacttttgaa
     9661 attgcagaga gcatcagcaa gtctttggcg aaaaaggctc ttgctggtaa gttcaatggt
     9721 aaattgattg atactactcg tgctattgaa gaggacggca cgcttgaaat cgtaacgcct
     9781 gaccacgagg atgccttgga tatcttgcgt cactcagcgg cgcacttgtt tgcccaagcg
     9841 gctcgtcgtc ttttcccaga catcaagttg ggcgttggtc cagctattca ggacggtttc
     9901 tactatgata cggacaatgc ggctggtcag atttcaaatg aagacctgcc acgcattcag
     9961 gaagaaatga tgaagattgt caaggaaaac ttcccttcag aacgtcgtga ggtgaccaag
    10021 gaagaagctc ttgagatttt caaaaatgat ccttacaagt tggaattgat tcaagaacac
    10081 tcggatgacg aggacggttt gaccatctat acccaaggcg aatacgttga cctctgccgt
    10141 ggcccacacg ttccgtcaac aggtcgtatc caaatttttg aattgctcaa cgtggctggt
    10201 gcatactggc gtggtaagag cgaaaatcca atgatgcaac gtgtctatgg tacagcttgg
    10261 tttgacaaga aagatctcaa ggcttacctt caaatgcgtg aggaagccaa agaacgtgac
    10321 caccgtaaac ttggtaagga attggatctt ttcatgatta gccaagaagt tggtcaaggt
    10381 ttgccattct ggttgccaaa cggagcaact atccgtcgta ccttggagcg ttacatcaca
    10441 gataaagagt tggcttcagg ttaccagcac gtttatacac caccgttggc ttctgttgaa
    10501 ctctataaga cttcaggtca ctgggagcat tattcagaag atatgtttcc aactatggac
    10561 atgggtgacg gtgaagagtt tgttcttcgt ccgatgaact gtccgcacca cattcaagtt
    10621 tacaaaaacc atgtgcgttc ttaccgtgag ttgccagtgc gtatcgccga gcttggtatg
    10681 atgcaccgct atgaaaaatc tggtgctctt actggtttgc aacgtgtacg tgagatgact
    10741 ctcaacgacg gccatatctt tgtcacacct gagcaaatcc aagaagagtt caaaaaagct
    10801 ctccagttga ttatcgatgt gtacgcagat ttcaacctaa acgactaccg tttccgtctg
    10861 tcttatcgtg acccagagga caaagagaag tactatgata acgatgagat gtgggaaaat
    10921 gcccagcgta tgctaaaagg tgccatggat gaaatgggcg taaactactt tgaggcagag
    10981 ggtgaagcag ccttctacgg tccgaagttg gatatccaag tcaagacagc ccttggtaac
    11041 gaagaaaccc tgtcaaccat tcagttagac ttcctcttgc cagaacgctt tggtttgact
    11101 tatatcggtg ctgatggtga agagcaccgc ccagttatga ttcaccgtgg tgtgatctcg
    11161 actatggaac gcttcacagc tatcttgatt gaaacctaca agggtgcctt cccaacttgg
    11221 ttggctccaa cccaagtgac tatgattccg atctctgtgg aagctcactt ggattacgct
    11281 tggaaggttg caaaagaatt gcaagaccgt ggtgttcgcg tacacgtgga tgagcggaac
    11341 gagaagatgc agtacaagat tcgtcagagc cagaccagca agattccata ccaactcatc
    11401 gtcggtgaca aggaaatgga agacaatgct gtcaacgttc gtcgctacgg aagtaaggca
    11461 acacaaactc agtctgtatc agaatttgtg gaccatatcc tagcagatat tgcccgcaaa
    11521 tcacgtccag ctgaagcagc tgaataaata aagcaagaag tccgaaaggg cttctttttt
    11581 gacagcaaaa actcccaacc aactggctgg gagaaatttt attctatact gctcgcccaa
    11641 gacttagcta cataacgtga caggcttgaa atggcaaagt tgatgctaaa gtaaatcaag
    11701 gctaccatga gatagagtgc aaaaacttgt tctgcctcaa agtagcgtcc catgaggatt
    11761 tgactcgaac cgaagagttc ttgcagggcg ataacggagt agaggaaact agtgtccttg
    11821 atgaccgtta caatctgcga gatgatggct ggcagcatct tgcgaatggc ctgtggcatg
    11881 atgatataga ccatgatttg cactggagta aaaccctgtg ataaaccagc ttcggtctgg
    11941 cccggtccga tggcgttgag accaccacgg ataatctcgg ccatggctgc cgtggtaaaa
    12001 atagtaaaag cagtgatacc agcaggcgtt gacttcattt ggaagactaa gaagacagtg
    12061 aaaatccaaa gcaagtttgg cacattacgc acaaattcaa tataaatcgt tgcaatccac
    12121 ttgaagagtg gattttttcc attgcgcatg atggcgagaa tcattccgaa gagaactgaa
    12181 agaaccaccg aaatgcttga gatataaagg gttaacttca aaccactcca caagagttgg
    12241 aaggttgaag gtttgagtaa ttctaaaaca taattcatcg ttcaacctcc ttttagtgtg
    12301 aaaaagctga cttattcttt tcttcaatgc ggcggcccca gcttgcaaca gggaagcaca
    12361 tgatgaagta aaggaaagca gcaccagcaa aggctgggat gtagttggca ttcatggcag
    12421 accaagattt tgtcataaac ataatatcag ctccagagat gatggcaaca gtagccgtat
    12481 tcttaattaa gtttactact tggttggtca aaggtggaag aatggtcgga atggcctgtg
    12541 gtaaaatgat gattcgcatg gtttcagact gagtaaatcc ttgtgaaagt gcggcttcag
    12601 tctgcccagt aggcacagcc tcaatccctg cacggatgac ctctgcgata taagcaccgt
    12661 gatagagtcc gacgcagata acagctgtcc agtagatgga tggcatgaga acataatttg
    12721 aaatcagtgg aagtccataa taaacaatca tgaactgaac caaaagcggc gtgttctgat
    12781 agtattcaac atagatacgt gcgatgattt ttaaaacttt atttttactt gaagagagac
    12841 taccaaagac aattcctaaa aacatggcca tgataaaggc accgacagaa atggctaagg
    12901 taaagagaaa accttggaaa aaggttggaa aatccttgaa ataactgacc caattctccc
    12961 aagcgtaagg actagttgtt aaaactgtca tattgtttca cctttctatt cgtcagtttc
    13021 tgtgactggt ttgaggccat tggcatcata gatgctttgt aggctaccat cggcagtcca
    13081 tttttctacg agactattta agtagtcgtt aaggtctttg ttagataatt tagtaacaat
    13141 tccatagtca gaagctgaga agctaaagtc catgagttca gatttcgagc tgatataccc
    13201 agaaaggata gattggtcta ctgaaaatgc gtctgtacgg tgagcgcgta gtgagactga
    13261 gagttcaggg tatgaaccta actcagcaaa actcacagta attccgtact tgtctgctag
    13321 ttcagagatg agggtgcgtg taatagaccc ctgagctaca ccaattgtct tgccgtctag
    13381 gtcagtaaat gttttgattc cgctatcctt attgaccaag aagccaacgg catctgtgta
    13441 gtaaggagtt gtgaaattgt agagcaattt gcgttcttca gtgatggtga aggttgcgat
    13501 gaccatatcc acttgaccgt tatctaagag tggtcctcgg gtttgcgctg taacgggagt
    13561 aaattcgata tctacaccta attcatctgc aattttacga gcaatgtcaa tctccattcc
    13621 ctcaaattca ccagtatcag ggttcttgta gccaaagttt gggacgtcct gtttcactcc
    13681 gacgcggagc acgcctctat cgatgatagc ttgaacttga ttactattgg taatggatgc
    13741 gggtgtttct gtttgagcca ctggttgttt tgcgaaaacg agaagaataa gtccaaagac
    13801 caataatata attgcaaaga aaatgttgat ttttttctta tccatagact tcctcctaga
    13861 gttttacttt gtcagattcg tggttgataa tcttgctgag gaattgttgg gcacgaggct
    13921 ctgtcgggtt gtcaaagaag ccattcacat ctgttgtatc aactaaaact tctccctcgg
    13981 ccatgaagat gatgcgatca gctacttcac gggcaaagcc catttcgtgt gttacgacaa
    14041 tcatgttcat cccgtcacgt gccaattttt gcataactgc aagtacatcg ccgatagttt
    14101 ctgggtccaa ggcagatgtt ggttcatcga agagtagaag ctcgggtttc atagctaagc
    14161 cgcgagcgat ggcgacacgt tgtttttggc ccccggatag catagcaggg taggaatcct
    14221 tccgatccca gaggttaaca aactcaagat atttttgagc ggttttttca gccgtagctt
    14281 tatcgattcc caaaacctta ataggtgcca aagtaacatt ttctaacacg gttttgtgtg
    14341 ggtaaaggtt gaaatgctgg aaaaccatgc caacttcttt gcgaagtgat acgagctctt
    14401 tgatagaagt agaggaaata tcatgtccat tgacgatgag cgttccttca tcaattgcct
    14461 ctaaaccgtt aatcgtgcga atgagagtag attttccgga cccggaaggt ccaaggagaa
    14521 cgacaacctg tccaggttcg aattccaagt tgatattgcg tagggcgtgg tagtcgccat
    14581 agtatttgtt gacatcttta aattctacta aagccataaa attctccttg catagtgttt
    14641 tttaggtatt cccatcttag cattgcctat atacaatgtc aagtaaattc tgacaattta
    14701 atgtgttgta tgttacaaaa tatgacatag ctgtgtcaga tggttttgaa at
//
LOCUS       DBNFCX010000054        14342 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.054, whole genome shotgun sequence.
ACCESSION   DBNFCX010000054 DBNFCX010000000
VERSION     DBNFCX010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 14342)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14342)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14342
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.054"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            112..738
                     /gene="gmk"
                     /locus_tag="AC1PJC_001452"
     CDS             112..738
                     /gene="gmk"
                     /locus_tag="AC1PJC_001452"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006163 - purine nucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HIP6620437.1"
                     /translation="MKERGLLIVFSGPSGVGKGTVRKEIFESSDNKFEYSVSMTTRPQ
                     RPGEIDGVDYFFRSREEFEDLIRQGQMLEYAEYVGNYYGTPLTYVNETLDKGIDVFLE
                     IEVQGALQVKKKVPDGVFIFLTPPDLEELQDRLIGRGTDSEEVIAQRIERAKEEIALM
                     REYDYAVVNDEVPLAAERVKRIIEAEHFRVDRVIGRYDEMIREQIAER"
     gene            762..1076
                     /gene="rpoZ"
                     /locus_tag="AC1PJC_001453"
     CDS             762..1076
                     /gene="rpoZ"
                     /locus_tag="AC1PJC_001453"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001817694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed RNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HIP6620438.1"
                     /translation="MMLKPSIDTLLDKVPSKYSLVILEAKRAHELEAGAKPTQEFTSV
                     KSTLRALEEIESGNVVIHPDPEAKREAVRRRAEEAKRLAEEEERKIKAQIAKEKEEGE
                     KI"
     gene            1422..3812
                     /locus_tag="AC1PJC_001454"
     CDS             1422..3812
                     /locus_tag="AC1PJC_001454"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HIP6620439.1"
                     /translation="MLAQIIVDVPLMQTDQAYSYRVPAELEEGLKVGVRVHVPFGKGN
                     RLIQGIVVDLIDEDDENNLQDLKELAEVLDYSPVLNQEQFWLADQMRKSVFSYKITLL
                     KSMLPSLLNSTYDKLLRPGIGLEMAEQISLFGDKEQIRFSDLDVTEQGKIMRLAQSGK
                     ILVDYVAKDKKQIKTEKWYRVCLEKLREADISNRAKKRQQLREFLLEHSEDQLLSNLK
                     SAYSADTLRYFQEKGYIEVWEEEVSRTQGVFDKVEKTQALDLNPEQAIAVREIVASIG
                     QESQTFLLQGVTGSGKTEVYLQVIDRVLKMGKTAIMLVPEISLTPQMTNRFISRFGQQ
                     VAILHSGLSDGEKYDEWRKIEAGNAQVVVGARSAIFAPLTNLGVIIIDEEHEATYKQD
                     SNPRYHARDVAKLRADYNRATLVLGSATPSLETRARASRGVYGRLTLNQRANPLARIP
                     EVEVVDFRDYIGQQEASNFTPVLIEKIREKLARKEQVVLMLNRRGYSSFVMCRDCGSV
                     DQCPNCDISLTLHMDTKTMNCHYCGFQKGIPQTCPNCQSRSIRYYGTGTQKAYDELQE
                     LLPEARILRMDVDTTKKKGAHENLLERFGRGEADILLGTQMIAKGLDFPNVTLVGVLN
                     ADTALNLPDFRSSERTFQLLTQVAGRAGRADKEGEVLIQTYNPNHYAIAFAKEQDYEG
                     FYRYEMGIRKNLGYPPYYFTVGLTFSHKSEEFVVKKAYETVAFLRQHLTDAIQILGPT
                     PKPIARTHNLYHYQIILKYRHEDRLEEVLNQILDWTQERENQDLRLIIDNEPQNMM"
     gene            3944..4882
                     /gene="fmt"
                     /locus_tag="AC1PJC_001455"
     CDS             3944..4882
                     /gene="fmt"
                     /locus_tag="AC1PJC_001455"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0071951 - conversion of methionyl-tRNA to
                     N-formyl-methionyl-tRNA [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HIP6620440.1"
                     /translation="MTKLIFMGTPAFSAMVLRGLLADGNYNILAVVTQPDRAVGRKKV
                     IQMTPVKEVALEYNLPVYQPEKLSGSQEMDELMNLGADGIVTAAFGQFLPTKLLNSVD
                     FAVNVHASLLPKYRGGAPIHYALINGDERAGVTIMEMVKEMDAGDMISSDSIAIEESD
                     NVGTLFEKLAVVGRDLLLQTLPAYIAGDLKPVAQDPEQVTFSPNIQPEEEVLDWKKSA
                     RQLFNQIRGMYPWPVAHTYWQGERFKIQEAVEAEGEGPVGRVIARSKKELIIATGQGA
                     LSLKTVQPAGKPKMTIADFLNGAGRDIAVGDQFGDQ"
     gene            4869..6182
                     /gene="rsmB"
                     /locus_tag="AC1PJC_001456"
     CDS             4869..6182
                     /gene="rsmB"
                     /locus_tag="AC1PJC_001456"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HIP6620441.1"
                     /translation="MVINKHETARSLALSVLEQVFDQGAYSNIALNKALESSRLSAQD
                     KGLATELVYGTVSRKITLEWYLAHFIEDREKLDTWVYYLLMLSLYQLVYLDKLPTHAV
                     VNEAVNIAKRKPGTDKFVNAILRKLSQDSLPKPADIKRKNKRLSVQYSVPVWLVQTLI
                     AEYGDERAEKIFQSLHIRNKASVRVTDGQQVEQLAEELGAQHSQLSPVGLVKSHGHFA
                     GTDYFKEGLITIQDETSQLVAPTLDIQGDEIILDACAAPGGKTCHMASYLTDGKVYAL
                     DLYDHKLNLIEENARRLGLEDKIETKGLDASRVHEEFGPDTFDKILVDAPCSGIGLIR
                     RKPDIRYNKASMDFDSLKTIQLQILDSVCQSLKIGGIITYSTCTIIAKENQEVIQEFL
                     QNHPNFEQVTLEHPQTDIMVDGCLLITPEQYKTDGFFIGQLRRKS"
     gene            6220..6957
                     /locus_tag="AC1PJC_001457"
     CDS             6220..6957
                     /locus_tag="AC1PJC_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Stp1/IreP family PP2C-type Ser/Thr phosphatase"
                     /protein_id="HIP6620442.1"
                     /translation="MEIALLTDVGQKRSNNQDYINRYKNRAGIDLVVLADGMGGHRAG
                     HIASEMAATDLGAAWVDTQLVTLNDVREWMVAIIDAENQKIHELGQTEEYKGMGTTLE
                     AVVVIDNQMIYAHVGDSRVGLIRDGEYTRLTNDHSLVGALVRAGQLTEEEAQRHPQKN
                     IVTQSIGQAEPIEPDIALKTLEVGDYVLINSDGLTNMVSTEDIRDIVLSDVSIESKVE
                     TLVRFANNAGGLDNITVGLLHITEEAR"
     gene            6957..8447
                     /gene="pknB"
                     /locus_tag="AC1PJC_001458"
                     /pseudo
     CDS             6957..8447
                     /gene="pknB"
                     /locus_tag="AC1PJC_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003070235.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Stk1 family PASTA domain-containing Ser/Thr
                     kinase"
     gene            8439..8951
                     /locus_tag="AC1PJC_001459"
     CDS             8439..8951
                     /locus_tag="AC1PJC_001459"
                     /inference="COORDINATES: protein motif:HMM:NF015734.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HIP6620443.1"
                     /translation="MTLYVSKGVAPQVVPNVVGKTQENATQILQTAGFSIGTITQEYS
                     SSVTAGQVISTDPVANTELTKGSIINLVVSKGKELIMPDLTSGNYTYSQARSQLQALG
                     VNVESIEKQEDRSYYSTTSDIVIGQYPAAGATIDGTVTLYVSVASTGTSSDSSTGSST
                     STSTSTDSGQ"
     gene            9239..9934
                     /gene="liaF"
                     /locus_tag="AC1PJC_001460"
     CDS             9239..9934
                     /gene="liaF"
                     /locus_tag="AC1PJC_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall-active antibiotics response protein
                     LiaF"
                     /protein_id="HIP6620444.1"
                     /translation="MRKVQFFLLIESMIFTMAAFDVVANEASRTLLLFSALLLVIWYF
                     LGRKVNSVLLVSSLSLLFLVFVLNPFFIIGIMLLVVYMLINFFSRYEKRNQYTHIVFS
                     DYSLQVQKEKNRWFGNHDHSQDRFGFEDINIVRLFGNDVVDLDKTVLVGRDNIVVIRK
                     TFGRTKIIVPIDVEVALSATSIYGRVSFLGESYWDLRNESIAVNSPDYQESHKRVKVV
                     TNNILGDVEVVRV"
     gene            9931..10947
                     /locus_tag="AC1PJC_001461"
     CDS             9931..10947
                     /locus_tag="AC1PJC_001461"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HIP6620445.1"
                     /translation="MRKRTYLLLAWFACLIVFVVIASTLPLLNYSLLDVTLWISTEQL
                     VFTLILLVIVLTLFLAVMVQTVSLASTQVMRTKLQAILKNKSIRTDTESDQLLLQLSD
                     KVRNLTRQVQLVDNQDLVKKEEIVEGERKRIARDLHDTVSQELFATSMILSGLSSNLS
                     TLPQETLQEQLMLVKDMIESAQRDLRILLLHLRPSELESKTLVEGFELILREVSDKSN
                     IIVHFQHEVEELPKLIEEHLFRIAQEIISNTLRHAKAKHLDVYLLQKETELQLKMTDD
                     GIGFQQGADDELSYGLQNIRERVEDMAGTIKIRTAPNKGVAIDIRIPLLKGKEDEYDS
                     SDAG"
     gene            10919..11560
                     /locus_tag="AC1PJC_001462"
     CDS             10919..11560
                     /locus_tag="AC1PJC_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HIP6620446.1"
                     /translation="MNTIRVMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAK
                     ALEVKPDVVVMDLVMPKMTGVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARG
                     YMLKTSSADEILAAIRKVALGEYAIETEVEKKVEHHKRHPDLHDDLTAREREILTLLA
                     KGYDNQRIADESFISLKTVKTHVSNILSKLAVSDRTQAVVYAFQHGLVAQEDQ"
     gene            11610..13010
                     /locus_tag="AC1PJC_001463"
     CDS             11610..13010
                     /locus_tag="AC1PJC_001463"
                     /EC_number="3.1.3.-"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional Cof-type HAD-IIB family
                     hydrolase/peptidylprolyl isomerase"
                     /protein_id="HIP6620447.1"
                     /translation="MDAKLRYKAKKIKIVFFDIDDTLRVKNTGYIPESIQQVFKSLKE
                     KGVLTGIASGRTPYGLVQEIKALKPDFFAMINGSYVEDAKGQVVYHQPMPQNLVESVL
                     NWAKEIGIEYGMLGSQKGTLSARTDRISQVIDLIYEGLETNPTFYKENDIYQLLTFEK
                     DGHEVELPEELQAELRSVRWDAISSDIVLKGSSKATGVAKVVEKLGLKPENVLVFGDG
                     LNDIELFDYAGISIAMGHSHPELQKHADYITKKVEEDGIFDALEKLGMVEKEKYFPQL
                     DLENVTGPVAHIKTNHGKLTVKLFPEIAPKTVANFVALSKDGYYDGIIFHRIIKDFMI
                     QGGDPTGTGMGGESIYGTAFEDEFSMEAFNLRGALSMANAGPNTNGSQFFIVQNQNFP
                     YNAKELERGGWPKEVAEAYFKNGGTPHLDQRHTVFGHLVDEESFVVLDAIAAVATDSA
                     DRPHEDVVIETIEIED"
     gene            13012..13383
                     /locus_tag="AC1PJC_001464"
     CDS             13012..13383
                     /locus_tag="AC1PJC_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HIP6620448.1"
                     /translation="MKIGDKLKGTVTGIQPYGAFVQLENGTTGLIHISEIKTGFVDNI
                     YDHLKLGQEVLVQVVDFDEYTEKASLSIRTLEEEQQKIPRHHRFTNERNKIGFSPLAK
                     QLPKWIEEAKGYLKEHKEKKV"
     gene            complement(13409..14335)
                     /gene="cysK"
                     /locus_tag="AC1PJC_001465"
     CDS             complement(13409..14335)
                     /gene="cysK"
                     /locus_tag="AC1PJC_001465"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HIP6620449.1"
                     /translation="MAIYQNITQLVGKTPVIKLNNIVPEGAAEVYVKLEAFNPGSSVK
                     DRIALAMIEDAEKAGTIKPGDTIVEPTSGNTGIGLAWVGAAKGYKVIIVMPETMSVER
                     RKIIQAYGAELVLTPGSEGMKGAIAKAKEIAEEKNGWVPFQFANPSNPKVHEDTTGQE
                     ILEDFGATGLDAFISGVGTGGTVSGVSHVLKTANPDIAIYAVEADESAVLSGEAPGPH
                     KIQGISAGFIPDTLDTSAYDGIIRVKSDDALATGRAIGGKEGFLVGISSGAAIHAAIE
                     VAKELGTGKKVLAILPDNGERYLSTALYEFND"
BASE COUNT         4330 a         2729 c         3364 g         3919 t
ORIGIN      
        1 tcaaagttcg ttttgggttg ggaatagaaa atattctaat cgtatttaaa agcagttgaa
       61 attcatgcta aattttgtta cactagaatg aaagatttag aaggagatat catgaaagag
      121 cgaggcttac tcattgtctt ttctggccca tctggtgttg gaaaaggaac agttcgaaag
      181 gaaatttttg aaagctctga taataaattt gaatattctg tatccatgac gacacgtcca
      241 cagagaccgg gagaaattga tggagttgac tatttcttcc gtagtcgtga ggaatttgaa
      301 gatttgattc gccagggtca aatgttggaa tatgcagagt acgttggaaa ttactatgga
      361 acacctctga cctatgtcaa tgaaactctt gataagggaa ttgatgtctt tttagaaatt
      421 gaagtacagg gtgccctcca agtgaagaaa aaggttccag atggggtgtt cattttcttg
      481 acaccacctg acttggagga gttgcaagat cgcttgattg gtcgcggaac ggatagtgag
      541 gaagttattg ctcaacgtat cgaacgtgcc aaggaagaga tcgccttgat gcgtgagtat
      601 gattatgcag ttgtgaacga tgaagtcccg ttggctgctg agcgtgtcaa gcgtattatc
      661 gaagcagaac attttcgtgt agaccgagtg attggtcgct acgatgaaat gattcgtgaa
      721 cagatagcag aacgataaaa gaaagaagag agaatcgcat tatgatgttg aagccgtcaa
      781 ttgatacctt gttggataag gtaccatcta agtattcttt ggttattctt gaggctaagc
      841 gtgcccatga attggaagca ggtgccaaac caactcaaga attcacctca gtgaaatcca
      901 ccctacgcgc cttggaagaa attgaatcag gtaatgtagt catccaccca gacccagaag
      961 cgaaacgtga ggctgttcgt cgccgtgccg aagaggctaa acgtttggcg gaagaagaag
     1021 agcgtaaaat caaagctcaa attgctaaag aaaaagaaga aggcgaaaag atttagaaac
     1081 aagactcggt tgggattgcc atccgggttt cttttcactt tcggaatgat gaaagttttg
     1141 acagaaagga ggcaggtcat ttagtttatc ttttaatatt tggggagtgg gaaagaactc
     1201 gaccaagata aaaagagttc gtcttcccac ccccccgcac agttgattag gctagattgg
     1261 gagtgcaaaa cacgaacaaa tctgccaatc aaccactgcg ctgagatgtt gaaacgaact
     1321 ctgagtagtg gtcctgggct ttttgcccag cctcgttata cataaagtga accttgttcg
     1381 catcagtcgt gatattagaa ggtaaaataa atggagatgg tatgttagca cagattattg
     1441 tagacgtccc tttgatgcag acagatcaag cttattccta tcgagttcca gctgagttgg
     1501 aagaggggct caaggttggc gtgcgtgtcc atgtaccctt tggtaagggc aatcggctca
     1561 ttcaagggat tgtagttgat ttgattgatg aagatgatga aaataactta caagacttga
     1621 aagagcttgc cgaggttttg gactatagtc ctgttctcaa tcaagagcaa ttttggttgg
     1681 cggaccagat gagaaagtca gtcttctcct ataaaattac cctcttaaaa tccatgttac
     1741 ccagcttgct caattcgacc tatgacaaat tgctccgtcc agggattggt ttggaaatgg
     1801 cagagcagat tagtctgttt ggtgataagg agcagattcg tttttctgac ttggacgtga
     1861 cagagcaagg gaaaatcatg cgtctggccc agtcaggaaa aatcttggta gactatgtgg
     1921 ccaaggataa gaagcaaatc aagacagaaa aatggtaccg agtttgtctg gagaaattac
     1981 gagaagcaga catcagcaat cgagctaaaa aacggcagca gttaagggaa tttcttctgg
     2041 aacattctga agaccagctc ctttcaaacc taaaatcggc ctattcagct gatacgctcc
     2101 gctatttcca agaaaagggc tatatagaag tctgggagga ggaagtgtcg cggactcagg
     2161 gagtttttga taaggtggaa aaaacgcagg ccttggattt gaatccagag caggcgattg
     2221 cggttcggga gattgtggcc tctatcggtc aggaaagtca gacatttcta ctgcaaggag
     2281 tgactggctc tgggaagacg gaagtctatc tccaggttat tgatagggtt ctgaagatgg
     2341 ggaaaacggc tattatgctg gtgcctgaaa tttccttgac ccctcagatg accaatcgtt
     2401 ttatttctcg ttttggtcag caggttgcca ttttgcattc gggcttatct gacggagaga
     2461 aatatgacga gtggcggaag attgaggcgg ggaatgccca ggtggttgtc ggggcccgtt
     2521 cggccatttt tgcccctttg acaaacttgg gtgttatcat cattgatgag gagcatgagg
     2581 cgacctacaa gcaggacagc aatccacgct atcatgcgcg tgatgtggca aagttgcggg
     2641 cagactataa tcgagcgacc ctggtcttgg gttctgctac gccgagtctt gaaacacggg
     2701 ctcgggctag tcgcggagtc tatggaagac tgactcttaa ccagagggcc aatcccttgg
     2761 cgcgtattcc agaagtggaa gttgtggatt tccgtgatta tatcggtcag caggaggcta
     2821 gtaattttac ccctgttctg attgaaaaga taagagaaaa attggctcgt aaggaacagg
     2881 tcgttcttat gttgaatagg cgtggttatt cttcttttgt catgtgtcgt gattgtggga
     2941 gtgtggacca gtgtccaaac tgtgatattt cccttacgct ccatatggac acaaaaacga
     3001 tgaattgcca ttattgtggt tttcaaaagg ggattcctca gacctgtcca aactgtcaaa
     3061 gtcgttctat tcgttattat gggacgggta cgcaaaaggc ctacgatgaa ttgcaggaac
     3121 tcttgccaga agctagaatt ttgcggatgg atgtggatac taccaagaaa aaaggtgctc
     3181 atgagaactt gctcgaacgg tttggtcgag gcgaagcgga tattcttctg ggaactcaga
     3241 tgattgccaa gggcttggat tttccaaatg tgaccctagt tggggtgctc aatgcggata
     3301 cggctctgaa tttgcctgat tttcggtctt ctgagcggac cttccagttg ctaactcagg
     3361 tagctggtcg ggctggtcga gctgataagg aaggggaggt cctgattcag acctataacc
     3421 ccaatcatta tgccattgct tttgccaaag agcaggatta tgaaggtttc tatcgttatg
     3481 agatgggcat tcggaaaaat cttggttatc caccttacta ttttacggtg ggtctaacct
     3541 tttcgcacaa gtcagaagaa tttgtcgtga aaaaagccta tgaaactgta gcctttctcc
     3601 gtcaacactt aacagatgca attcaaatct tgggaccgac gcccaagcct attgccagaa
     3661 ctcataatct ctaccactac cagatcatct tgaaataccg gcatgaagac cgtttggaag
     3721 aggtattgaa tcagattttg gattggacac aggagagaga aaatcaagat ttgcggctga
     3781 ttattgacaa tgaaccgcag aatatgatgt gaggtcacta ttgaccttgc atttttttgt
     3841 tttaagaacc tttgattaag gaaaaaataa gcaaaaatga tataattagg ggatagtata
     3901 attgatatga atcagaaaat gaaaaggaga tgagaacacg aatatgacaa agttgatttt
     3961 tatgggaacg ccagcatttt cagcgatggt cttaagaggg ctcttagctg atggaaatta
     4021 taacatactg gcagttgtaa cccagccaga ccgagctgtt ggacgaaaaa aagtcatcca
     4081 aatgacacct gtgaaagaag tagccttgga atacaattta ccagtctatc aaccagagaa
     4141 gctatctgga agtcaagaaa tggatgagct gatgaattta ggagcagatg ggattgtgac
     4201 ggcagctttt gggcaattcc taccaaccaa attattgaac tcagttgact ttgcagtcaa
     4261 tgttcatgcc tctcttcttc ctaaataccg tggcggggca cctatccact atgctctaat
     4321 taacggtgat gaacgtgccg gcgtaaccat catggaaatg gtcaaggaaa tggatgccgg
     4381 tgacatgatt tccagcgata gcattgctat tgaagaaagc gacaacgtcg gcaccttgtt
     4441 tgaaaagttg gctgttgttg gtcgggattt attattacaa accttaccag cctacattgc
     4501 tggtgacttg aaaccagtcg ctcaagatcc agaacaggta accttctcac caaatatcca
     4561 gccagaagaa gaagtgcttg attggaagaa atccgctcgt caactattta atcagattcg
     4621 cggtatgtac ccgtggcccg ttgcccacac ctattggcaa ggggaacggt ttaaaattca
     4681 agaagctgta gaagcagaag gtgaaggacc agttggtcgg gttattgctc gaagcaagaa
     4741 agaattgatc attgcgacag gtcagggagc cctttctctg aaaactgtcc agccagctgg
     4801 taagccaaaa atgaccattg cagacttttt aaatggtgca ggtcgagata ttgcagtagg
     4861 agatcaattt ggtgatcaat aaacatgaaa cagcaagaag tctagcctta tctgtattgg
     4921 aacaagtctt tgatcaaggt gcttactcga acatcgctct caataaggct ctagaatctt
     4981 ctcgtttatc agcacaggac aagggcttgg cgaccgaatt ggtttatggg acggtttctc
     5041 gtaaaattac cctagagtgg tatttggcgc attttatcga agatagggaa aagttggaca
     5101 cttgggtcta ctatctcctc atgttgagcc tctaccagtt ggtatatttg gacaaattgc
     5161 ctacccacgc agttgtcaat gaggcagtta atattgccaa gcgaaagcct ggaactgaca
     5221 aatttgttaa tgccattttg cgtaagctta gtcaggattc cttgccgaaa ccagcagata
     5281 ttaaaagaaa gaacaaacgt ctatccgttc agtattctgt gccagtttgg ttggtccaaa
     5341 ccctgattgc agaatatggt gatgaacgtg cagagaagat tttccaaagc ttacatattc
     5401 ggaacaaggc cagtgtacgc gtgacagatg gtcaacaagt ggagcaattg gcagaggagc
     5461 taggcgctca acactcgcag ttatcaccag ttggcttggt taaatcccat ggacactttg
     5521 cggggacaga ttatttcaag gaaggactca tcactattca agatgaaacc agtcaattgg
     5581 tagctccgac tttggatatt caaggagatg aaatcatctt ggatgcctgt gcagctccgg
     5641 gtggaaaaac ctgtcatatg gcaagctatc ttacggatgg aaaagtttat gcgttggatt
     5701 tatatgatca taaactaaac ctgattgaag aaaacgcacg tcgtttaggc ctagaagata
     5761 agattgagac caaaggtctg gacgccagtc gtgttcatga ggaatttggt ccagatacct
     5821 ttgataaaat cctagtagac gccccttgtt caggtattgg actcatccgc cgtaagccag
     5881 atattcgtta taacaaggca tcgatggact ttgattctct aaagactatc cagttgcaga
     5941 tactagacag tgtttgccaa agcttgaaaa ttggtggtat aataacctat agcacatgta
     6001 cgattattgc taaggaaaac caagaggtta ttcaagaatt tctgcaaaac catcccaatt
     6061 ttgaacaggt gacactagaa caccctcaaa cagatattat ggtggatggt tgcttgttga
     6121 taacccctga acagtataag acagatggat ttttcatcgg tcaacttaga cgaaaatcct
     6181 agaataagag gaggaagttg cttagcaacg ataaaaatta tggaaattgc attacttacc
     6241 gatgtaggac agaaacgttc gaacaaccaa gactatatca atcgctacaa aaaccgcgca
     6301 gggattgatt tggtcgtgtt agctgatgga atgggtggtc accgtgccgg ccatattgct
     6361 agtgaaatgg cagcaacaga tttgggagct gcttgggttg atactcaatt agtgaccttg
     6421 aatgatgtcc gtgaatggat ggttgcaatc attgatgctg aaaaccaaaa gattcatgaa
     6481 cttggacaga cagaagaata caaggggatg ggaacaactc ttgaagcagt tgttgtcatc
     6541 gacaaccaaa tgatttatgc ccatgttgga gattcacgag ttggattgat tagagatggc
     6601 gaatatacac gtctaaccaa cgaccattcg ctggtaggtg cccttgttcg agctggtcag
     6661 ctcacagaag aagaagcaca gcgtcatcct caaaaaaata ttgtaacgca gtccattgga
     6721 caagccgaac caattgaacc agacattgct ttgaaaactc ttgaggttgg agattatgtc
     6781 cttattaaca gcgatggctt aaccaatatg gtatcaaccg aggacattcg tgatattgta
     6841 ttgagtgatg tttcaattga aagcaaggta gaaacacttg tacgttttgc caataatgca
     6901 ggcggtctag ataatattac agtaggtttg cttcacatta cggaggaggc taggtaatga
     6961 ttcaaatcgg taagatcttt gccggtcggt atcgaatcgt tcggcaaatt ggtcgaggcg
     7021 gtatggcaga tgtttaccta gcaagagatt tgattttaga tggagaagag gttgctgtta
     7081 aagttcttcg gaccaactat cagacagatc aaattgctat ccagcgtttt caacgtgaag
     7141 cgcgtgccat ggcagaactt gaccatccca atatcgttcg tatttcggac atcggtgaag
     7201 aagatggtca gcagtatctg gctatggaat atgtcaatgg cctcgattta aaacgttata
     7261 taaaagaaaa tgcaccactc tccaacgatg ttgcggtgcg aattatggga cagattctcc
     7321 ttgctatgcg catggcgcac acgagaggaa ttgtccatcg agatttgaaa cctcagaacg
     7381 tccttttgac ttccaatgga gtcgctaaag taacagactt tggtattgca gttgcctttg
     7441 ctgaaacgag tttgacacaa accaactcta tgttgggttc tgttcactat ctttcacctg
     7501 agcaggcgcg tggttcgaaa gcgaccattc aaagtgacat ttatgcgatg gggatcatcc
     7561 tttttgaaat gttgacgggt cgcattccct atgatggaga cagtgctgtg acgatcgctc
     7621 ttcagcattt ccaaaaacct ctcccatctg ttagagaaga gaatgccaac gtacctcagg
     7681 ccttagaaaa tgttgtacta aaagcaacgg ctaaaaaatt aaacgagcgc tataagtcgg
     7741 ttgcagaaat gtacgcagat ttagcttcgg ctctatccat ggatcgtcgg aatgaaccca
     7801 gggttgaact agaagggaac aaggttgata caaaaacctt gccgaaactc tcccaagcca
     7861 atgttgaaac gaaagtaccg catacaaaca gttctgccca agtttttgcg acggataagg
     7921 gggctggtaa gaaagaagtg gcgaagtcgg gaaataagcc tgtttcaaaa ccaaggccag
     7981 gtatgcgtac acgctacaaa gtcttgatag gggctatttt gttaacagtc atagcggctg
     8041 gagtcatgtt tttcaacact ccacgaacag ttacagtccc tgatgtatct ggtcaaaccg
     8101 ttgaaaaagc tacagaaatg attgaagtgg caggattgga agttggaaat atcacagaag
     8161 aagcgacagc gactgtagat gaaggcttgg taatacggac ctctccggct gcaaagacga
     8221 ccagacgtca agggagtaag attgatattg tagtagcaac ggctgcgatg gtatctattc
     8281 cagatgtgac agataaggat tctgatactg cacggcagga attggaggct cttggtttcc
     8341 aagtgacaat aaaagaagaa tatagcgaaa aagttgccca aggacttgtc atcaaaacag
     8401 atccaggagc aaatagttct gctgagaagg gggcaaaaat taccctttat gtttccaaag
     8461 gagtagcgcc acaagttgtg ccaaacgttg ttggaaaaac tcaggagaat gctactcaaa
     8521 ttcttcagac agcaggcttc agtattggaa ctattactca ggaatatagc tcatctgtta
     8581 ctgcgggtca ggttatcagt acagatcccg ttgccaatac agagttgaca aaaggttcta
     8641 tcatcaatct agttgtttca aaaggaaaag aattgattat gcctgattta acatctggca
     8701 attacaccta ttcacaggcg cgtagtcaat tacaagcgct aggcgtcaat gtggaaagca
     8761 ttgaaaaaca agaagataga agctattatt caacgacaag tgacatcgtc attggacaat
     8821 atcctgctgc tggagcaaca attgatggaa cagttacctt gtatgtctcc gttgcatcga
     8881 ccggaaccag tagcgattcc tcaacaggaa gttctaccag cacaagtact tcaacagata
     8941 gcggacaata aagatgaata aggttgggca gatgccgaac ctttttctct tgattagaga
     9001 gcgtagcttg tgagcgatcc cttatgccaa aattgtttct ttctgtccat caagagtgat
     9061 ggcctaggag tgatttgcat agtttatagt catgtttagt ttattttgct tgcttcgtta
     9121 atttactttg ccgtacccaa gtacagcctg catctcgtgc tttgaactaa tatttcctac
     9181 tttggatgga gttcttttac ttattttttg ttacaatagt atagaaagga tggagaagat
     9241 gcgaaaagtt caattttttc tactaataga aagtatgatt tttacgatgg cagcctttga
     9301 cgtagtagcc aatgaggcca gtcggaccct gctacttttc tctgccttat tactcgtcat
     9361 ttggtacttc ctaggaagaa aagtcaacag tgttttactg gtcagctcct tatctctatt
     9421 atttttggtc tttgttttaa atcccttctt tattattggg attatgctac tagtcgtgta
     9481 catgctgatt aatttctttt cacgttatga aaagagaaac caatataccc acattgtttt
     9541 tagtgactat tctctacagg ttcaaaaaga gaaaaataga tggtttggca accacgacca
     9601 ctctcaagat aggtttggtt ttgaagatat taacattgta cgcttgtttg gcaatgatgt
     9661 agttgatttg gataagactg tattagttgg cagagataat attgttgtaa ttcgtaaaac
     9721 gtttggacgg acaaaaatta ttgttccaat tgatgttgag gttgcacttt cagcaactag
     9781 tatctatgga cgagtaagtt tcctgggtga atcatactgg gatttgcgga atgaaagtat
     9841 agcggtcaat agtcctgatt atcaagaatc acacaaacgt gtaaaagtcg ttaccaacaa
     9901 tatactggga gatgtggagg tggttcgcgt atgagaaaac gtacctacct actcctcgcc
     9961 tggtttgcct gtcttattgt ttttgtggtg attgcttcca ccctcccact tttaaattat
    10021 tcattgctag atgttacgct ctggatttca acggagcagc tcgtgtttac tctcattcta
    10081 ctagttattg ttttgaccct ttttctagct gtaatggtac aaactgtcag cctagcctcc
    10141 actcaggtta tgcggacgaa gttacaagct atcttgaaga ataaaagcat tcgaacagac
    10201 accgaaagtg atcaactctt gctccagttg tctgataagg tcagaaacct cacgcgtcag
    10261 gtgcagctgg ttgacaatca agatttagtc aagaaagaag agattgttga gggagaacgg
    10321 aaacggattg ccagggattt gcatgatacg gttagtcaag agttatttgc aacgagcatg
    10381 attttgtcag gattatcgtc caatctatcc actcttccgc aggaaacctt gcaggaacag
    10441 ctgatgctcg tgaaagacat gattgagtct gcccaaagag acctacgcat cctattatta
    10501 catctacgcc caagtgaact tgaaagtaaa accttggttg aaggatttga gctgattttg
    10561 cgtgaagtta gcgacaaaag taatattata gttcatttcc aacatgaagt agaggagtta
    10621 ccgaaactaa ttgaagaaca tctcttccgc attgcgcaag aaattatcag taataccttg
    10681 cgacatgcca aggccaagca tttggatgtt tacctcttgc agaaggaaac agaacttcag
    10741 ttgaaaatga cagacgatgg gatcggcttc caacaaggtg cagatgatga attaagttac
    10801 ggtcttcaaa acatacgtga gcgggttgaa gacatggctg gaacgataaa aattcgcaca
    10861 gctccaaata agggagtggc gattgatatt cgtatcccac tattgaaagg aaaagaagat
    10921 gaatacgatt cgagtgatgc tggttgacga ccatgagatg gttcgtctag gattgaaaag
    10981 ttacttaaat ttacagccag atgttgaagt agttgcagaa gctagtgatg gcgaggaagg
    11041 tttggctaaa gcattagagg ttaagcccga tgttgtagtg atggacttgg ttatgcccaa
    11101 gatgactggc gtagaagcaa ccctggcctt gctgaaggaa tggccgcaag cgcagattgt
    11161 catcctgact tcctatctag ataatgagaa aatctatcct gtgctggaag caggagctcg
    11221 tggctatatg ttgaaaacgt caagtgctga cgaaatctta gcagccatcc gcaaggtagc
    11281 tcttggagaa tatgctattg agacagaagt agagaaaaaa gtagagcacc ataaacgcca
    11341 cccagattta catgatgact tgacagctcg tgaacgcgaa atcttgacgc tgttagccaa
    11401 gggatatgat aatcaacgaa ttgcagatga gtccttcata tccttaaaaa ctgttaagac
    11461 ccatgtttcc aatatcttat ccaaactagc tgttagcgat cgtactcaag cagttgttta
    11521 tgctttccag catggtttgg tggcgcaaga ggaccaatag tggtataatg aaaattagtt
    11581 aattttcaac caaaggatag tggaattata tggatgcaaa actcagatat aaggcaaaaa
    11641 aaataaaaat agtctttttt gacattgacg acacgctacg tgtaaagaat acaggctaca
    11701 ttcctgaatc aattcagcag gtttttaaat cactgaaaga aaagggagtt ttgacaggaa
    11761 ttgcgtcagg acgaacgcct tatggtttgg tgcaagaaat caaggcctta aaaccagact
    11821 ttttcgctat gattaacggc tcctacgtag aagatgccaa aggtcaggta gtgtaccatc
    11881 agccgatgcc ccaaaattta gtagaatctg tattaaattg ggctaaagaa attggaatcg
    11941 aatatggtat gcttggtagt caaaaaggga cactttctgc acgaactgac cgcattagtc
    12001 aagtaattga cttgatttat gaaggtttgg aaacaaaccc aactttttat aaagaaaatg
    12061 acatctatca attgctaact ttcgagaaag atggtcacga agtagaactt ccagaagagt
    12121 tgcaagcaga attgcgtagt gttcgttggg atgctatttc atcagacatt gtgctaaaag
    12181 gctcttccaa agcaactggt gttgctaagg ttgttgaaaa actaggcctg aaacctgaaa
    12241 atgtcctagt gtttggagat ggactcaacg atattgagtt attcgattat gcaggaatta
    12301 gtatcgctat ggggcattcg catccagaac tgcaaaagca tgcagattat atcacaaaaa
    12361 aagtagaaga agatggcatt tttgatgcct tggagaaatt aggtatggta gaaaaagaaa
    12421 aatatttccc gcaattagat ttggaaaatg ttacagggcc ggttgcgcat atcaagacta
    12481 accatggtaa gttaacagta aaactctttc ctgaaattgc acccaaaact gtagcaaatt
    12541 tcgtagctct ttctaaagat ggctattatg acggaattat cttccatcgt attatcaaag
    12601 actttatgat tcaaggtggc gatccaaccg gaacaggtat gggtggtgaa tctatttatg
    12661 gtactgcgtt tgaagatgaa ttttcaatgg aagcttttaa tctcagagga gccttgtcaa
    12721 tggccaatgc aggaccaaat acaaatggaa gccaattctt tatcgttcaa aaccaaaact
    12781 tcccatacaa tgcgaaagaa ttagaacgag gcggttggcc taaagaagtt gcagaagcct
    12841 atttcaaaaa tggcgggaca ccacatctag accaacgcca cacagtgttt ggtcatctag
    12901 ttgatgaaga atccttcgtc gtcttggatg ctatcgcagc ggttgcaaca gattcagcag
    12961 atcgtccaca tgaagatgtt gtaattgaga ccatcgaaat agaggattaa gatgaaaatc
    13021 ggagataaac tcaaggggac ggtaacgggt attcaaccgt atggagcctt tgtacaatta
    13081 gagaatggga cgacgggcct aatccatatc tcggaaatca aaacaggttt tgttgataat
    13141 atttatgatc atttaaaatt ggggcaagag gttttggtac aggtagtcga ctttgatgaa
    13201 tatactgaaa aggctagttt atcaatccgg accttagaag aagaacaaca aaaaattccg
    13261 cgtcatcatc gttttacaaa tgaacggaat aaaattggtt tttccccctt agcaaaacaa
    13321 cttccgaaat ggattgagga agctaaaggc tatctcaaag aacacaaaga aaagaaggta
    13381 taggatgcat tcctaacctt ctttcatttt aatcattgaa ctcgtaaaga gctgttgata
    13441 agtaacgttc tccgttatca ggcaagattg ccaacacttt ttttccagtt cccaactctt
    13501 tagcgacttc gatagcagcg tgaattgctg cacctgaaga aataccaact aagaatcctt
    13561 cttttccacc gatagcacga cctgtagcta aggcatcatc ggatttgaca cgaataatgc
    13621 catcataggc gctagtgtcc aaagtatctg gaataaaacc tgccgaaata ccttggatct
    13681 tgtgcggacc aggtgcttca ccagataaga cagctgattc atcagcttcg acagcataga
    13741 tagcaatatc tggatttgct gtcttcaaaa catgcgaaac acctgaaacg gtaccaccag
    13801 taccaacgcc agatataaag gcatctaaac cagttgcgcc aaagtcttcc aaaatttcct
    13861 gtcctgttgt atcttcgtga acttttggat tggatggatt agcaaactgg aaaggaaccc
    13921 agccattttt ttcttcagca atctcttttg ctttggcgat agcccccttc atcccttcgc
    13981 taccaggagt caagacaagt tcagctccat aagcttggat aatcttacga cgctcaacac
    14041 tcatggtttc aggcatgacg ataatcacct tataaccttt tgctgctcca acccaagcaa
    14101 gaccgatacc agtgttacca cttgttggct caacaatagt atctccaggt ttgattgtac
    14161 cagccttctc agcatcttca atcatagcca aggcgatacg gtcttttaca gaagatcctg
    14221 ggttaaaggc ctctaatttc acatagacct ccgctgcccc ctctggaacg atattattga
    14281 gtttaataac aggtgttttt ccaactaatt gagtaatgtt ttgataaata gccatatggc
    14341 ac
//
LOCUS       DBNFCX010000055        14256 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.055, whole genome shotgun sequence.
ACCESSION   DBNFCX010000055 DBNFCX010000000
VERSION     DBNFCX010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 14256)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14256)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14256
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.055"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            148..1809
                     /locus_tag="AC1PJC_001466"
     CDS             148..1809
                     /locus_tag="AC1PJC_001466"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018371225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA];
                     GO_function: GO:0004534 - 5'-3' RNA exonuclease activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HIP6620450.1"
                     /translation="MSTIKIMALGGVRENGKNLYIAEVNEHIFVLDAGAKYPENEQLG
                     VDVVVPNFDYLEENKHRVAGVFLSHGHADAIGALPYLLEKVKVPVFGSHLTIELAKLL
                     VKGNNATKKFNDFHVINAETEIDFGDSVVSFFQTTHSIPESLGIVVKTDEGNIVYTGD
                     FKFDQAADKFYRTDFGRLAEIGNEGVLALLSDSANADSNVQVASMHEAGEEILNTIAD
                     CDGRVIVAAVASNIVRIQQIFDAAEATGRRVVLTGHDVENIVRTAIQLKKLRLVSERL
                     LVKPKDMNKYEDHELIILETGRMGEPLNGLRKMSIGRHRYVEIKEGDLVYIVTTPSIS
                     KEAVVARVENLIYKAGGTVKSITKNLRVSGHGNARDLQLMLNIMKPKYLFPVQGEYRQ
                     LDAHAKAALEIGMYPENIIIVKRGDVMAFEEGDFVHSGAVPAGDVMIDGNAMGDVGNI
                     VLRDRKILSEDGIFIVAITVNRREKKIISKAKVNTRGFVYVKKSKDILREASELVNTT
                     VENYFTKDSFDWAELKSAVRDDLAKFLFDQTKRRPAILPVIMEVK"
     gene            1874..2650
                     /locus_tag="AC1PJC_001467"
     CDS             1874..2650
                     /locus_tag="AC1PJC_001467"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000863793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HIP6620451.1"
                     /translation="MAIMKIEYHSEALDMSRQVTVLYPDRNRVENPDDNDIPVLYLLH
                     GMGGNQDSWLNRSTVERLVRYTNLIVVMVNTDKGWYTNTTYGMNYFDAIAVELPQILK
                     RFFPNMSDKREKNFIAGLSMGGYGTFKIAMMTNRFSHAASLSGALQVDFTSPSALELG
                     SPDYWMGVFGDLDNPENPNLLTNISRFSDKKTKFYAWCGEEDFLFEGHQKAVEELKEL
                     GFDIEASFGPGKHEWYYWNQQIEKVLAWLPIDFKLEERLS"
     gene            2716..3411
                     /locus_tag="AC1PJC_001468"
     CDS             2716..3411
                     /locus_tag="AC1PJC_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M57 family metalloprotease"
                     /protein_id="HIP6620452.1"
                     /translation="MKLIGNILRWIWRTFWGLIWLSMVLLACGLGLLFYFQQEAAPQM
                     LQTLAQEVQLMVKGQSEVTIEEGVNTIKHLTTDTVNTADHGRWESNTATVYIETQNPT
                     FVAAYETAIANWNATGAFTFVMTSDPNQADIIATEMNDGNTQAAGEANSTTNLLTNYY
                     SSVTVRLNSFYLLNDQYGYDMDRIIHTAEHELGHAIGLDHEDSQTSVMESAGSNHGIQ
                     QADIDAVLALYSE"
     gene            3422..3787
                     /locus_tag="AC1PJC_001469"
     CDS             3422..3787
                     /locus_tag="AC1PJC_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620453.1"
                     /translation="MLRTITNTIKRYPEQALLFLYNAGIFAWMQSTSHSIMEQIGIDS
                     NWFDKIPEPIKAWTGASLESMQTLLNSSAWGWLIVSMILMLVIRFVKGLIKFVIMLII
                     IGGGLYLLWQNKELLSGLV"
     gene            3888..5786
                     /locus_tag="AC1PJC_001470"
     CDS             3888..5786
                     /locus_tag="AC1PJC_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HIP6620454.1"
                     /translation="MIILSGNKIERSFAGEVLFNNINIQVDERDRIALVGKNGAGKST
                     LLKILVGEEAATSGDISTKRDLSLSYLAQDSRFESENTIYDEMLHVFDDLRMTEKRLR
                     SMEEQMGSLSGNELDQLMKTYDSLSEEFRLAGGFNYEADIRAILNGFKFDQTMWDMKI
                     SELSGGQNTRLALAKMLLESPELLVLDEPTNHLDIDTIAWLENYLVHYKGALIIVSHD
                     RYFLDKVATLTLDLTKHSLDRYVDNYSQFVELKEQKLQTELQNYEKQQKEIAKLEDFV
                     QKNIVRASTTKRAQARRKQLEKMERLDKPTTGQKSANMTFQSDKTSGNIVLTVENAAV
                     GYDGEILSQPISIDQRKLDAIAIVGPNGIGKTTLLKSIIGALPFIKGEAKLGANVEVG
                     YYDQTQSALTPSNTVLEELWSAFPTTPEVEIRNRLGAFLFSGDDVKKSVSMLSGGEKA
                     RLLLAKLSMENNNFLILDEPTNHLDIDSKEVLENALIDFDGTLLFVSHDRYFINRVAT
                     KVLEISETGSTLYLGDYDYYLEKKAELEVEAQPDQLESTSQSAGAMDYQAQKENQKEQ
                     RKLARRIEQIEAEIETIENRLSELNQAMLETNDIGQLTDYQKEIDQLTAQQENLMEEW
                     EELSEQMG"
     gene            5795..6124
                     /locus_tag="AC1PJC_001471"
     CDS             5795..6124
                     /locus_tag="AC1PJC_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620455.1"
                     /translation="MIQQNTETLEDNLRFNKLSKLIQTKLSQYFETYPSAVQCQLVCF
                     DRDETRRKVLSYDIYSDFDKLFWVESIAKPISSYSYGHQIDKKDIDKLDREFILDTFL
                     GIDEERG"
     gene            6131..6958
                     /locus_tag="AC1PJC_001472"
     CDS             6131..6958
                     /locus_tag="AC1PJC_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative RNA methyltransferase"
                     /protein_id="HIP6620456.1"
                     /translation="MTKHQRFANSDQFFACPHCGQALGLDQSSLRCPNRHTFDIAKQG
                     YVNLAPQVKQSANYHKSSFENRQAFLEAGYYDHLYEALEGKIAELGLRSVLDIGCGEG
                     FYSRKLAEKMDLDILAFDISKDSILLASKSDRIKSVKWFVGDLTKLPIQDKTIDGILD
                     IFSPANYQEFARVLKAGGAILKLVPGPNHLKELRHLAKDQLRKESYDNQDIVDHFKSY
                     LGQVEQVLVSRTLPITEDHSQILADMTPLFFQVDQSKLDLSQLTEITVEAVLLVGTI"
     gene            complement(7259..8047)
                     /gene="gatD"
                     /locus_tag="AC1PJC_001473"
     CDS             complement(7259..8047)
                     /gene="gatD"
                     /locus_tag="AC1PJC_001473"
                     /EC_number="6.3.5.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004359 - glutaminase activity [Evidence
                     IEA];
                     GO_function: GO:0140282 - carbon-nitrogen ligase activity
                     on lipid II [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid II isoglutaminyl synthase subunit GatD"
                     /protein_id="HIP6620457.1"
                     /translation="MVYTSLKSPEKDYTYDLHIAHLYGDLMNTYGDNGNILMLKYVAE
                     KLGARVQVDIVSLTDEFDKNFYDIAFFGGGQDYEQSILAKDLPTKKDSLADFIENDGV
                     MLAICGGFQLLGQYYIEAGGRKIDGLGIMGHYTLNQTNNRYIGDIKIHNDEFNETYYG
                     FENHQGRTFLADNQKPLGKVVYGNGNNKEDGGEGLHYKNTFGSYFHGPILSRNANLAY
                     RLVTTALRKKYGQDIQLASYADILSKEVAEEYGDVKSKAEFDTQ"
     gene            complement(8047..9390)
                     /gene="murT"
                     /locus_tag="AC1PJC_001474"
     CDS             complement(8047..9390)
                     /gene="murT"
                     /locus_tag="AC1PJC_001474"
                     /EC_number="6.3.5.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_function: GO:0140282 - carbon-nitrogen ligase activity
                     on lipid II [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid II isoglutaminyl synthase subunit MurT"
                     /protein_id="HIP6620458.1"
                     /translation="MKINTALGILAGKSSQFILKKLGRGTTLPGKIALKFDKHILDSL
                     AKDYEVVVVTGTNGKTLTTALTVGILQEAFGEITTNTSGANMITGITATFLSAKKNKN
                     GKKIAVLEIDEASLARVTDFIKPSLIVFTNIFRDQMDRYGEIYTTYQMILDGAAKAPQ
                     ATILANGDSPLFNSTNVINPVKYYGFATEEHEPRLAHYNTEGVLCPHCHQIIQYKLNT
                     YANLGSYICNNCGFCRPELDYKLTDLKEITNTSSTFAIDGQDYKINIGGLYNIYNALA
                     AVSVAEFFGVSPEKIKAGFDKSKAVFGRQETFKLGEKDCTLVLIKNPVGATQAIEMMK
                     LAPYDFSLSVLLNANYADGIDTSWIWDADFEQITQMDIPQVFAGGVRSSEIARRLRVT
                     GYPENQITETPKLEDIMTLIEQSSSQHAYILATYTAMLEFRDLLAQRQAVGKEMK"
     gene            9572..10426
                     /gene="cdaA"
                     /locus_tag="AC1PJC_001475"
     CDS             9572..10426
                     /gene="cdaA"
                     /locus_tag="AC1PJC_001475"
                     /EC_number="2.7.7.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004016 - adenylate cyclase activity
                     [Evidence IEA];
                     GO_process: GO:0006171 - cAMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diadenylate cyclase CdaA"
                     /protein_id="HIP6620459.1"
                     /translation="MLNLNQLLDTGYWSSLIASPWTALLHLIDISIVVYLIYNFSKSI
                     AGTKIMTLIRGVFLFIIVQIIASLFGLQTIAWLINQVITYGVIAAVVIFAPELRAMLE
                     KLGRTTQIFGTNTVSAEEKLIVAFLKSVAYMSPRKIGALVAVEQAQTLQEYRATGIPL
                     NADISQELLINIFIPNTPLHDGAVIVKKDKVAVACAYLPLSESAGISKEFGTRHRAAI
                     GLSEVSDAFVFIVSEETGSISIARNGIFKHDLTLDEFEAELRATFISENVEKKSIWKR
                     LGGGKHER"
     gene            10416..11120
                     /locus_tag="AC1PJC_001476"
     CDS             10416..11120
                     /locus_tag="AC1PJC_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CdaR family protein"
                     /protein_id="HIP6620460.1"
                     /translation="MNDKFKAVGHLALSIFLALLLFFYATTTNYKNSESAAQNTESET
                     YVHTLSNVPIEIEYDTNKYFISGFSSTVAVELRGSNRVLLQRESDESTRTFQVTADLR
                     ELSDGTQTVKLQLTNLPAGVSATLAPDAITVKIGKKVSKAFPVVGRVYSNQLAEGYSL
                     SKVSVNVDTVKVTTDEETMAKIDRVEAVAMDVSNLSENYSGTAKLQAVDSDGNVLPVV
                     LSQTEANMQIILTKTK"
     gene            11133..12485
                     /gene="glmM"
                     /locus_tag="AC1PJC_001477"
     CDS             11133..12485
                     /gene="glmM"
                     /locus_tag="AC1PJC_001477"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007517007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HIP6620461.1"
                     /translation="MGKYFGTDGVRGEANVELTPELAFKLGRFGGYVLSQHETDVPRV
                     FVARDTRISGQMLEAALIAGLLSVGIHVYKLGVLATPGVAHLVKTEKASAGVMISASH
                     NPAQDNGIKFFAGDGFKLDDALEAEIEALLDAEEDTLPRPSAKGLGDVVEYPEGLRKY
                     QQFLVSTGTDLDGMKVALDTANGAAATSARQIFVDLGADLTVMAEKPDGLNINEGVGS
                     THPEKLQELVKETGSQIGLAFDGDSDRLIAVDENGDLVDGDRIMYIVGKYLADRGLLA
                     KNTIVTTVMSNLGFHKALDREGIEKAVTAVGDRYVVEEMRKEGYNVGGEQSGHVILMD
                     YNTTGDGQLTAVQLTKIMKETGKKLSELAAEVTIYPQKLVNIRVENSMKDKAMEVPAI
                     AAIIEKMEAEMAGNGRILVRPSGTEPLLRVMAEAPTDAEVDYYVDTIADVVRAEIGLD
                     "
     gene            12534..14078
                     /locus_tag="AC1PJC_001478"
     CDS             12534..14078
                     /locus_tag="AC1PJC_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000025412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HIP6620462.1"
                     /translation="MSILEVKNLSHGFGDRAIFENVSFRLLKGEHIGLVGANGEGKST
                     FMSIVTGQLQPDEGKVEWSRYVTAGYLDQHAKLEKGQSVRDVLRTAFDELFKTEARIN
                     DIYMSMAEEGADMDALMEEVGELQDRLESRDFYTLDAKIDEVARALGVMDYGMDKDVT
                     ELSGGQRTKVLLAKLLLEKPDILLLDEPTNYLDAEHIDWLKRYLQNYENAFVLISHDI
                     PFLNDVINIVYHVENQLLTRYTGDYYQFQEVHAMKRAQLEAAYERQQKEIADLQDFVN
                     RNKARVATRNMAMSRQKKLDKMEIIELQAEKPKPSFDFKMARTPSRFIFQTTDLEIGY
                     DRVLTRKPLNLTFERNQKIAIVGANGIGKSTLLKSLLGIIPPLGGSVERGEYLELGYF
                     EQEVAGGNRQTPLEAVWDAFPALNQAEVRAALARCGLTSKHIESQIQVLSGGEQAKVR
                     FCLLMNRENNVLVLDEPTNHLDVDAKDELKRALQAYKGSILMVCHEPDFYEGWVDDVW
                     DFNELT"
BASE COUNT         4053 a         2804 c         3441 g         3958 t
ORIGIN      
        1 ttgatggttg aatataattt tgaaccaaag tgtgtctttt gcaaatagag ctccgacata
       61 gcagactgta attcgacttg gaactcccaa ggaccgttgg taagaaaaat aaaatggaca
      121 cctgtgggat gtccaaaagg agtaaagatg agtacaatta aaattatggc tcttgggggt
      181 gtgcgggaaa atggaaaaaa cctgtacatt gccgaagtga atgaacatat ttttgttttg
      241 gatgcagggg caaagtatcc tgagaatgaa cagttaggtg tggatgtagt cgtccctaat
      301 ttcgattatt tggaagaaaa taagcatcgt gtagcagggg tctttttatc tcacgggcat
      361 gcagatgcta tcggagcgct tccttatctc ttggagaaag tgaaagtgcc agtatttggt
      421 tcgcacttga ctatcgaatt ggctaagcta cttgtcaagg ggaataatgc tactaagaaa
      481 ttcaatgatt tccatgttat caatgctgaa actgaaattg atttcgggga ttcagtggta
      541 tctttctttc agacgaccca ctctattcca gagagtttag gaattgtcgt taagacggat
      601 gagggaaata ttgtctacac aggtgacttt aagtttgacc aggcggcaga taagttttat
      661 cgtacggatt ttgggcgatt ggctgaaatc ggtaacgaag gtgtgttggc cctcttgtca
      721 gactcagcaa atgcagatag caatgttcaa gtagcgagca tgcatgaggc tggggaggaa
      781 attctcaata cgattgctga ctgtgatggg cgtgttattg tggcagcagt tgccagcaat
      841 attgtacgta ttcaacagat ttttgacgcg gcagaagcaa ctggtcgtcg tgtcgtattg
      901 acaggacatg atgtggaaaa cattgtccga acagcgattc aattgaaaaa acttcgtttg
      961 gtcagcgaac gcttgttggt aaaaccaaag gatatgaaca agtatgaaga ccatgaattg
     1021 attattttag aaactggtcg tatgggcgag ccgttaaatg gattgcgtaa aatgtctatc
     1081 ggtagacatc gctacgttga aatcaaagaa ggtgatctag tttatattgt taccactcca
     1141 agtatttcaa aagaagcggt tgttgctcgt gtggagaact tgatttacaa ggctggtggt
     1201 accgtaaaat ctattacaaa gaatcttcgc gtctctgggc atgggaatgc tcgtgatttg
     1261 cagctcatgc tcaacatcat gaagcctaaa tatcttttcc cagttcaagg ggagtatcgt
     1321 caattggatg ctcacgctaa ggctgcgctt gaaatcggta tgtatccaga aaacattatc
     1381 atcgttaagc gtggggatgt catggctttt gaagaggggg attttgtcca tagcggagcg
     1441 gttcctgctg gtgatgtcat gattgacgga aatgctatgg gcgatgttgg aaatatcgtc
     1501 cttcgtgacc gtaagatcct ctcagaagac ggtatcttta tcgtggctat cactgtcaac
     1561 cgccgtgaga aaaaaatcat ttctaaagcc aaggtcaata ctcgtggttt tgtctacgtg
     1621 aaaaagagca aggacatctt gcgtgaggca tcagaattgg tgaatacaac ggtggaaaat
     1681 tactttacaa aggatagctt tgactgggca gagcttaaga gtgctgttcg cgatgattta
     1741 gcaaaattcc tctttgacca aactaaacgt cggccagcta ttttgccggt aattatggaa
     1801 gtcaagtaag ctgatttata tacataagaa gagccgaggg aaactcaggc tctttaccat
     1861 aaggagaaga tttatggcaa taatgaaaat tgaataccac tcagaagctc tagatatgtc
     1921 tagacaggtt acggttttat atccagatcg caatcgtgtg gaaaatcccg atgacaacga
     1981 cattcctgtc ctatatcttt tgcacggtat gggaggcaat caggattcct ggctgaatcg
     2041 ttctacagtg gaacggttgg ttcgttatac caatcttatc gtggttatgg tcaatacaga
     2101 taaaggctgg tataccaata ccacttacgg tatgaattac ttcgatgcca ttgcagtaga
     2161 gttgcctcaa attctcaaac gatttttccc aaatatgtct gacaagcggg agaagaattt
     2221 tatcgctggt ttgtctatgg gtggttatgg gactttcaag attgccatga tgaccaatcg
     2281 tttttcacac gcagcttcgc tttcaggggc attgcaggtt gattttacca gtccatctgc
     2341 cttggaatta ggtagtcctg actattggat gggtgttttt ggagatttag ataatccaga
     2401 aaatccaaat ctactgacta atatttctag attttcggac aagaaaacca agttctatgc
     2461 ctggtgtggt gaggaagatt ttctctttga agggcatcaa aaggcagttg aggagttgaa
     2521 agagctggga tttgatatag aggcaagttt cggacctggt aaacatgagt ggtactactg
     2581 gaatcagcag attgagaaag tattggcttg gttgccaatt gatttcaaat tggaagaaag
     2641 actgtcctag tttttaagaa aagtttcaga aattatggct atactaaaac ctatttctag
     2701 aaagaggtat agtctatgaa acttattgga aatattctac ggtggatttg gcggacattt
     2761 tggggtctga tttggttatc aatggtgtta ttggcttgtg gtctaggtct attattctat
     2821 tttcaacagg aagcagcgcc tcagatgtta caaactctag ctcaagaagt gcaattgatg
     2881 gtcaaaggac agtctgaagt gacgattgaa gaaggtgtta ataccattaa gcacctgacg
     2941 actgatacgg tcaatacagc cgatcatggt cgatgggaaa gcaatactgc gactgtttac
     3001 attgaaaccc agaatccaac atttgtagct gcctatgaaa cagccattgc aaattggaat
     3061 gcgacagggg catttacttt tgtgatgaca agtgatccaa atcaggctga tattattgct
     3121 actgagatga atgatggaaa tacccaggca gcaggtgagg ccaattcaac gactaattta
     3181 ttgacgaatt attatagctc ggtaacggtg cgtctgaata gtttttattt attaaacgac
     3241 caatatggtt atgatatgga tagaattatc catacagctg agcatgaatt gggccatgct
     3301 attggcctag atcatgaaga tagtcagacc tctgttatgg aatcggcagg ttctaatcat
     3361 ggtatccagc aggcagatat tgatgcggtc cttgccttgt attcagaata gaagggaaaa
     3421 tatgcttcga acaattacaa acacaataaa acgttatcct gagcaagctc tgctctttct
     3481 ctataatgct gggatttttg catggatgca gtctaccagt cattcgatta tggaacaaat
     3541 cggtatagat agcaactggt ttgataaaat ccccgaacct atcaaggcct ggacaggtgc
     3601 cagtctagag agtatgcaaa ccttactcaa ttcttccgct tggggatggc tgatagtatc
     3661 tatgatattg atgttggtca tccgctttgt taagggcttg attaagtttg tcattatgct
     3721 gattattatc ggcggtggtc tttatctgct ctggcagaat aaggaattgc ttagcggttt
     3781 ggtctaaata ttttttgaga aggacagtga cggtaaagtc gctgtttttt gctgaaatca
     3841 gaaaaaggat tccgcacggt taccctaaat tatggtacaa tatttttatg attattctaa
     3901 gtggaaacaa gattgaacgc tcttttgcgg gcgaagtttt atttaacaat atcaacattc
     3961 aagtggacga acgggatcgg attgcccttg tcggaaaaaa tggagcaggc aagtccaccc
     4021 tgctcaaaat ccttgtcgga gaagaagcag cgaccagcgg tgacatttca accaagcgtg
     4081 atttgtccct ttcttacctg gcacaggata gtcgttttga gtcggaaaat accatttatg
     4141 atgaaatgct ccatgtcttt gacgacctgc ggatgacgga gaaacgcctg cggtctatgg
     4201 aagagcaaat gggtagtctt tctggcaatg aactcgacca gctcatgaag acctatgata
     4261 gtctgtcgga agaatttcgt ctggcaggtg gttttaacta tgaagcagat attcgtgcta
     4321 ttttgaatgg ttttaagttt gaccagacca tgtgggacat gaaaatctct gagctctctg
     4381 gtgggcagaa tactcgtttg gccttggcaa aaatgcttct tgaaagccca gaactcttgg
     4441 tcctggacga gccgaccaac cacctggaca ttgacacgat tgcctggctg gaaaactacc
     4501 tagtacatta caagggagcc ttgattattg tcagccatga ccgctatttc ttggacaagg
     4561 tggcgacact gacactggat ttgaccaagc attccttgga ccgttatgtg gacaattatt
     4621 ctcagtttgt cgagctcaaa gaacagaagt tgcaaaccga attgcaaaac tatgaaaagc
     4681 agcagaagga aattgccaaa ctagaagact ttgtccagaa aaatatcgtc cgtgcttcga
     4741 ccaccaagcg tgctcaggct agacgcaagc aattggaaaa gatggagcga ctggacaagc
     4801 caacaactgg tcagaagtct gccaacatga ccttccagtc agacaagact tcaggaaata
     4861 tcgtcttgac agtggaaaat gctgcggtgg gctacgatgg agaaatactt tctcagccta
     4921 tttccattga ccaacgaaag ctggatgcca ttgccattgt cggtccgaat ggaatcggaa
     4981 aaacaaccct gctcaaatcc atcatcggag ctctgccatt tatcaaaggg gaagccaagc
     5041 tcggtgccaa tgtggaagtg ggctactatg accagaccca gtcggccctg acgccttcca
     5101 ataccgtctt ggaggagctc tggtcagcct ttccgaccac acctgaagtg gagatccgca
     5161 accgccttgg agcctttctc ttctcaggag acgacgtcaa aaaatccgtg tccatgctgt
     5221 ctggtgggga aaaagcccgc ctgctcctcg ctaagctgtc catggaaaac aacaacttcc
     5281 tcatcctcga cgagccgacc aaccacctgg acatcgacag caaggaggtc ctggaaaatg
     5341 ccctgatcga ctttgacggc accctgctct ttgtcagcca cgaccgctat ttcatcaacc
     5401 gcgtcgccac caaggtgcta gaaatctcgg aaacgggctc cacgctctac ttgggcgact
     5461 atgattatta tttagagaaa aaggcagagc tggaagtaga agcccagcct gaccagctag
     5521 aaagcaccag ccaatcagcc ggagccatgg actaccaagc ccaaaaggaa aaccaaaaag
     5581 agcaacgcaa actggcccgc cgcatcgagc aaatcgaggc agaaatcgag accattgaaa
     5641 accgcctgag cgagctcaac caagccatgc tagaaaccaa tgatatcgga cagctgaccg
     5701 attatcagaa agaaatcgat caattgactg cccaacaaga aaacctcatg gaagaatggg
     5761 aagaattatc tgagcagatg gggtaagaaa taagatgatc caacagaata cagaaacact
     5821 cgaagataac ttacgattta ataaattatc caaactgatt cagacaaaat tgtcccaata
     5881 ttttgaaacc tatccttcag ctgtccagtg ccaattagtt tgttttgata gagatgaaac
     5941 tcgtagaaaa gtccttagct atgacattta ttccgatttt gataagctct tctgggtaga
     6001 gtcaatagca aagcctattt ctagttattc ctacggacat caaattgata aaaaagatat
     6061 agacaaacta gatagggagt ttatcttgga tacttttctt ggaatagatg aagaaagagg
     6121 atagattttc atgaccaaac accaacgttt tgccaatagc gaccaatttt ttgcctgtcc
     6181 acattgtggg caggctcttg gtcttgacca gagcagtctt cgctgcccca accgccacac
     6241 cttcgacatc gccaagcagg gctacgtcaa tctggcaccc caggtcaagc agtccgccaa
     6301 ctaccacaag tctagctttg aaaaccgcca ggccttttta gaggcgggct attacgatca
     6361 tctctacgag gctttggagg ggaaaatagc agagctgggc ttgcggtctg tcttggacat
     6421 cggctgtgga gagggctttt attcccgcaa attagccgag aaaatggact tggacattct
     6481 tgcttttgat atttccaagg attccattct cttggcatct aaatctgaca ggatcaagtc
     6541 ggtcaaatgg tttgtcggtg acttgaccaa gttacccatt caagacaaga ccattgacgg
     6601 tatcttggac atcttctccc cagccaatta ccaggaattt gccagagtgc tgaaagctgg
     6661 tggggctatt ctcaagctgg tcccaggccc caatcacctc aaggagctcc gccatttagc
     6721 caaagaccaa cttcgcaagg aatcctatga taaccaggat attgtggacc atttcaagtc
     6781 ttacctgggg caggtggagc aagtgctggt cagccggact ctgccgatta cagaagacca
     6841 ctcccaaatt ttggcagaca tgacacccct ctttttccaa gtagaccagt ccaagctgga
     6901 tttgagtcag ctgacggaga ttacggttga ggcagtgctt ttggtaggaa cgatataaaa
     6961 aatgaaaccg cctctgaata ccagaagcgg ttttgcttta tttctcatac tcttcgaaaa
     7021 tcaaagtcag acgttgttga cttgatttga tgagtggaaa gctccagcgg aggtttccag
     7081 cctgtcactt gacaataata aagtgacaga gttctatctg cgccatatag acacgaacga
     7141 tgctcgctct atttccaacc accaaagctt ccccaaacct tttgtagcga acttcgttcg
     7201 ctttatttcc aagcaccaaa ggtttcccaa acctttggtg ctagtctgat tctgattttc
     7261 attgagtatc aaattctgcc ttgcttttta catcgccata ttcttcagcg acttctttgc
     7321 tgaggatgtc ggcgtagctg gcaagttgga tgtcttgtcc gtattttttg cggagggcag
     7381 tagtgaccag gcggtaggcc aggttggcat tgcgggataa gattggtccg tggaagtagc
     7441 taccgaaggt gtttttgtag tgcaggcctt cgccaccgtc ttccttattg ttgccattac
     7501 catagacaac cttgccaagc ggtttttggt tgtcagctag gaaggtacga ccttggtggt
     7561 tttcgaaacc gtagtaggtt tcgttgaact catcgttatg aatcttgatg tcaccgatat
     7621 agcggttatt ggtttggttg agggtgtagt ggcccatgat acccagtccg tcaatcttgc
     7681 ggccgccagc ttcgatgtaa tattgcccga gcaattggaa gccaccgcag atagccagca
     7741 tgacgccatc gttttcgata aagtctgcta ggctgtcttt ttttgtcggt aaatccttag
     7801 caagaatgga ttgttcatag tcctgtccac caccgaaaaa ggcgatgtcg tagaaatttt
     7861 tgtcaaattc atctgtcagg gaaacgatgt ccacctggac acgagccccc agcttttcag
     7921 ccacatactt aagcatgagg atattgccat tgtccccata ggtattcatc aaatcaccgt
     7981 agagatgagc gatgtggaga tcataagtgt agtctttttc aggacttttt aatgacgtat
     8041 agaccattat ttcatctcct ttccaactgc ttggcgttga gccagcaggt cacggaattc
     8101 cagcatagct gtataagtgg ctaaaatata agcatgttgg ctactcgatt gctcaatcaa
     8161 ggtcatgatg tcttctagtt ttggtgtttc agtaatctgg ttctcaggat agccagtcac
     8221 acggaggcga cgggcgattt cagacgaacg aacaccgcct gcaaagactt gtggaatgtc
     8281 catttgagtg atttgttcaa agtcagcatc ccaaatccag ctggtatcaa ttccgtcagc
     8341 gtagttggca ttgagaagga cggacaggct aaaatcgtat ggagccagtt tcatcatttc
     8401 aatagcctgg gttgcaccga cagggttttt aatcaagacc aatgtacaat ccttctcacc
     8461 caacttaaat gtttcttggc gaccgaagac tgccttggat ttgtcaaatc ctgccttgat
     8521 tttttcagga gatacgccga aaaattctgc tacgctgaca gctgctaggg cattgtagat
     8581 attgtaaagc ccaccgatgt tgattttgta atcctgaccg tcaatggcaa aggtagaaga
     8641 agtattggtg atttctttca agtctgtcaa cttatagtcc agctcaggtc ggcaaaagcc
     8701 acagttgtta cagatatagc tgcccaagtt agcgtaggta ttgagcttgt actggataat
     8761 ctggtggcaa tgaggacaga gaacgccttc tgtattgtaa tgggccagac gaggttcatg
     8821 ctcttccgtc gcaaaaccgt agtattttac tggattgata acgttcgtcg agttaaaaag
     8881 cgggctgtca ccattggcca aaatagttgc ctgcggagct tttgcagccc cgtccaaaat
     8941 catctggtag gtggtataaa tctcaccgta gcggtccatc tggtcacgga agatattggt
     9001 aaagacaatc aggctaggct tgataaagtc ggttacacgg gcaagacttg cttcgtcaat
     9061 ctccaagacg gcaatcttct tgccgttttt atttttcttg gcagacaaaa aggttgccgt
     9121 aattcctgtg atcatattgg caccgctggt attggtcgtg atttctccaa aggcttcttg
     9181 gaggatacca actgtcaggg cggtggtcag agtctttccg ttagtacctg tcacaacaac
     9241 gacttcataa tccttagcca aactatctaa aatatgttta tcgaatttga gggcaatttt
     9301 tccaggtagg gtagtaccac gtcctagttt tttcaaaatg aactgggaac tttttcctgc
     9361 tagaataccc aaagctgtat ttattttcat gggactattt tatcataaag gttggggatt
     9421 ttctagaatg gagtatgttg gaacgtgata tattcctgca gtaaatctgt aatattttta
     9481 acaggaaggt cactattttc taaagaaaag gggaaaaaat atggtataat gagtacatta
     9541 ctatgtatga gttagaaagt atgagaatga tatgttaaac ctaaaccagt tactggatac
     9601 agggtattgg tcgagtttga tagccagtcc ttggaccgca ctgttgcacc taattgatat
     9661 tagtatagtt gtttatttga tttataattt tagtaagtct attgcaggta ctaaaattat
     9721 gacattgatt cgaggggttt ttctcttcat tattgttcag attatagcga gtttattcgg
     9781 tctgcagacg attgcttggc tgattaatca agtaatcacg tatggggtta ttgcagcagt
     9841 agttattttt gcaccagagt tgcgtgctat gcttgaaaaa ctcggtagaa caactcagat
     9901 ttttgggaca aatacagtga gtgcagaaga aaagctaatt gttgcttttc tcaaatcggt
     9961 tgcttatatg tctccgcgta aaattggtgc acttgtggca gtagaacaag cccaaacatt
    10021 gcaagaatat agagcaacgg ggattccact caatgcggat atatcgcagg aattattaat
    10081 aaatattttc atcccgaata caccgctaca tgatggggct gtaattgtca agaaagacaa
    10141 ggtagctgtt gcttgtgctt atttgcccct gtcagagagc gcaggaattt caaaggaatt
    10201 tggaacacga catcgtgcag ccattggctt atcggaggta tctgatgcgt ttgtgtttat
    10261 tgtttctgaa gaaactggca gtatctctat tgcacgaaac gggatattta aacatgattt
    10321 gactttggat gagtttgaag cagagttgcg agcgactttt atttctgaaa atgtagagaa
    10381 aaagtccatc tggaagcgat taggaggtgg caaacatgaa cgataagttt aaagctgtag
    10441 gtcacttagc cttatctatt tttctagcat tgttgctctt tttctatgcg acaaccacca
    10501 actataaaaa ttcagaatca gctgcacaga acacggagtc agaaacctat gttcacacac
    10561 tgagtaatgt accgattgag attgaatatg atacaaacaa gtattttatt tccggatttt
    10621 cttcgacggt agcagttgaa ttaaggggct ctaatcgtgt tctcctacag agagaatccg
    10681 atgagtcaac tcggactttt caagtgactg cggatttgag agagttgagt gatgggacac
    10741 agactgtcaa gctacaattg accaatttgc cggcaggagt gagtgcgaca ctagcaccag
    10801 atgcgattac cgttaagatt ggtaaaaaag ttagcaaggc atttccagta gtaggtcgag
    10861 tctatagtaa tcaattggca gaaggttaca gtctgtctaa ggtttcagtc aacgtagata
    10921 ccgttaaagt gacaacggat gaagaaacaa tggctaagat tgatcgggtc gaagctgttg
    10981 cgatggatgt gagcaatctg tctgagaatt atagtggtac agctaaatta caggctgtag
    11041 atagcgacgg caatgtcttg ccagttgtac tgtctcagac ggaagcaaat atgcaaatta
    11101 tacttacaaa aacaaaataa gaggttatga aaatgggtaa atattttggg acagatggtg
    11161 tccgtggaga agcaaacgta gaattaacgc cagaattagc attcaaattg ggtcgttttg
    11221 gtggttatgt ccttagccag catgagacgg atgttcctcg tgtctttgtg gcgcgtgaca
    11281 cacgtatctc aggtcaaatg ttagaggctg ccttgattgc aggacttcta tcagtaggga
    11341 ttcatgtgta taaattggga gttttggcaa caccgggtgt tgcccaccta gtcaaaactg
    11401 aaaaagcaag tgcaggtgtc atgatttctg caagtcataa cccagcgcaa gataacggta
    11461 tcaaattctt tgctggtgat ggtttcaaat tggatgatgc attggaagcg gaaattgagg
    11521 ctcttcttga tgctgaggaa gacacattgc cacgcccatc tgctaaaggt ctaggagatg
    11581 tggtagaata tccagaaggt ctacgtaagt accagcaatt cttggtttca actggtacag
    11641 atttggacgg tatgaaagtt gcacttgata cagctaatgg tgctgcagca acatctgcac
    11701 gtcaaatttt tgtagatttg ggagcagatt tgacagtaat ggctgaaaag ccagacggtt
    11761 taaatatcaa tgaaggcgtt ggctcaaccc acccagaaaa attgcaagaa ctggtcaagg
    11821 aaacaggtag tcaaatcggt cttgcctttg atggtgacag tgaccgcttg attgccgtcg
    11881 atgaaaatgg tgatttagta gacggtgacc gcatcatgta catcgttggt aaataccttg
    11941 ctgatcgagg tctattggcc aaaaatacaa ttgtgaccac agttatgtcc aaccttggtt
    12001 tccataaggc tttggatcgt gaaggtattg aaaaagctgt gaccgcagtt ggtgaccgct
    12061 atgtggttga agaaatgcgc aaggaaggct acaatgtcgg tggtgagcag tcaggacatg
    12121 tgattctgat ggattataac accacaggag acggccagtt gaccgctgtg caattgacca
    12181 aaatcatgaa agaaactggt aagaagttgt cagaattggc agcagaagtg accatttacc
    12241 cacaaaaatt ggttaatatc cgtgtggaaa acagcatgaa ggacaaggca atggaagtgc
    12301 ctgctattgc agctatcatt gaaaaaatgg aagcagaaat ggctggcaac ggtcgtatct
    12361 tggtacgccc aagtggtact gagcccctct tgcgtgtcat ggcagaagcg ccaacggatg
    12421 ctgaagtcga ttactacgtg gacaccattg ccgatgtggt ccgtgcggaa atcggtttgg
    12481 attaagaaaa agacagagac tggaaggatt tccagcctct tttgtgagga aatatgagta
    12541 ttttagaagt aaagaattta agtcatggtt ttggtgaccg cgcaattttt gaaaatgtct
    12601 ccttccgtct cttgaaaggg gaacatatcg gacttgtcgg tgccaatggt gaagggaaat
    12661 cgaccttcat gtccatcgtg acaggtcaat tgcagccaga tgaaggtaag gttgaatggt
    12721 cacgttatgt aacggcaggt tatttagacc agcatgctaa attagaaaaa ggtcaatcag
    12781 tccgtgatgt cttgcggaca gcattcgatg aacttttcaa gacagaagct cgtatcaatg
    12841 acatttacat gtctatggca gaagagggag ccgatatgga tgccctcatg gaagaggttg
    12901 gcgagctgca agatcgtctg gaaagccgtg atttctatac gcttgatgcc aagattgacg
    12961 aagtagcgcg tgcgcttggt gtcatggact atggcatgga caaggacgtg acggagttat
    13021 cagggggaca acggactaaa gttcttcttg caaaattact cctggaaaag cctgacatct
    13081 tgcttctgga tgagccgacc aactacttgg atgctgaaca catcgactgg ctcaaacgct
    13141 acttgcagaa ctatgaaaat gcctttgtct tgatttcgca tgacattcct ttcttgaatg
    13201 atgtgataaa cattgtctac catgtggaaa atcagctctt gactcgctat acaggtgatt
    13261 actaccaatt ccaagaagtt catgctatga agcgggctca gttggaggca gcttatgagc
    13321 gccagcagaa ggaaattgca gacttgcagg acttcgttaa ccgtaacaag gcccgtgttg
    13381 cgactcgaaa catggccatg tctcgtcaga agaaattgga caagatggag attattgagc
    13441 ttcaagcaga gaaaccaaag ccatcatttg atttcaaaat ggctcgaact ccaagtcgct
    13501 ttatcttcca aacgactgat ttggaaattg gttatgaccg tgtattgaca cgtaaaccgc
    13561 tcaatctgac ctttgaacgc aaccagaaga ttgccattgt cggtgccaac ggtatcggta
    13621 aatctactct tcttaaaagt ttgctgggga ttattccacc gctgggcggt tctgtggagc
    13681 gtggggagta tttggaacta ggctatttcg agcaagaagt agctggtggc aatcgtcaga
    13741 ctccgcttga agccgtttgg gatgcttttc ctgctcttaa tcaggcggaa gttcgggcgg
    13801 ccttggctcg ttgcggtctg acttccaagc atatcgaaag ccaaattcaa gttctttcag
    13861 gtggtgagca agccaaagtt cgcttctgtt tgcttatgaa ccgtgaaaac aatgtcctgg
    13921 ttctcgacga gcctaccaac cacttggatg tggatgccaa ggatgaactc aaacgtgccc
    13981 ttcaagccta taagggctct atcctcatgg tctgccacga gcctgatttc tatgaaggct
    14041 gggtggatga tgtttgggat tttaatgaat tgacttaaga aacaagctat cgaaaggtag
    14101 ctttttcttt gtgcttatac tataatagaa ttagcatagt aaaggagggg aaaatgaaaa
    14161 gaacagaacg aggtcatatt ggctaggcct ctccagaggg agtaaaacgg tctggggata
    14221 gaccgtttta gctcaacaac tagaaataaa gacttg
//
LOCUS       DBNFCX010000056        14217 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.056, whole genome shotgun sequence.
ACCESSION   DBNFCX010000056 DBNFCX010000000
VERSION     DBNFCX010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 14217)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14217)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14217
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.056"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(8..757)
                     /locus_tag="AC1PJC_001479"
     CDS             complement(8..757)
                     /locus_tag="AC1PJC_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class A sortase"
                     /protein_id="HIP6620463.1"
                     /translation="MSKREKKKKRKGSFWRNLLTVVLILISLALIFNTSIRNFIIGWN
                     TNKYQISNVTTEDIKKNKQAETTFDFDQVQSISTEAILAAQWDAQRLPVIGGIAVPEL
                     GINLPIFKGVFNTSLMYGAGTMKENQEMGKGNYALASHHIFGVTGAADVLFSPLDRAK
                     NGMKIYITDKTNVYTYVIDSVEIVSPESVYVIDDVEGRTEVTLVTCTDYNATQRIIVK
                     GVLESTTPYNGTAKDILDSFNKSYNQYDYGQ"
     gene            complement(764..3208)
                     /gene="gyrA"
                     /locus_tag="AC1PJC_001480"
     CDS             complement(764..3208)
                     /gene="gyrA"
                     /locus_tag="AC1PJC_001480"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HIP6620464.1"
                     /translation="MQDKNLVTVNLTNEMKSSFIDYAMSVIVSRALPDVRDGLKPVHR
                     RILYGMNELGITPDKPHKKSARITGDVMGKYHPHGDSAIYEAMVRMAQWWSYRHMLVD
                     GHGNFGSMDGDGAAAQRYTEARMSKIALEMLRDINKNTVNFADNYDASEREPEVLPAR
                     FPNLLVNGTTGIAVGMATNIPPHNLGETIEAVKLVMDNPEVTTREIMEVLPGPDFPTG
                     ALVMGKSGIHRAYETGKGSIVLRSRTEIEEYGNGRERIVVTEFPYMVNKSKVQEHIVK
                     LVQEKRIEGITAVRDESNREGVRFVIEVRRDASANVILNNLFKQTQLQTNFSFNMLAI
                     QNGVPKILSVRQILESYIEHQKEVVTRRTRFDKEKAEARAHILEGLLIALDHIDEVIR
                     IIRNSETDAIAQAELMEKFELSERQSQAILDMRLRRLTGLERDKIQSEYDELVALIAD
                     LADILAKPERVVQIIKDELEEVKRKYADPRRTELMVGEVLSLEDEDLIEETDVLITLS
                     NQGYIKRLAQDEFQAQKRGGRGVQGTGVKDDDFVRELVSTSTHDRLLFFTNKGRVYRL
                     KGYEIPEYGRTAKGLPVVNLLKLEENEAIQTIINVTKDQEADSYLFFATRQGVVKRTS
                     VSEFANIRQSGLKALNLKEDDELINVFLTNGQADIIMGTKFGYSVRFTETDVRNMGRT
                     ATGVRGINLREGDQLVGATMISDDQEVLVLTEKGFGKRTPASEYPTKGRGGKGIKTLK
                     VAEKNGSLAGLTTVSGDEDIMVITDTGVIIRTSVANISQTGRSTMGVKVMRLNDEAKI
                     MTFALVDAAEIKEEKE"
     gene            3397..4380
                     /locus_tag="AC1PJC_001481"
     CDS             3397..4380
                     /locus_tag="AC1PJC_001481"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003050541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004459 - L-lactate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HIP6620465.1"
                     /translation="MTATKQHKKVILVGDGAVGSAYAYALVNQGIGQELGIIDINKDR
                     TQGDAEDLSHALAFTFPKKIYSAEYSDAHDADLVVLTAGLPQKPGETRLELVEKNLRI
                     NQQIVTEIVNSGFNGIFLVAANPVDVLTYSTWKFSGFPKERVIGSGTSLDSARFRQAL
                     AEKIGIDARSVHAYIMGEHGDSEFAVWSHANVAGVKLYDWLQDNRDIDEQGLVDLFVS
                     VRDAAYSIINKKGATYYGIGVALARITKAIFDDENAVLPLSVYQAGQYEGVEDVFIGQ
                     PAIIGAHGIVRPVNIPLSEAELQKMQASAKQLKDIIDDAFANPEIAAGVKN"
     gene            complement(4423..4953)
                     /locus_tag="AC1PJC_001482"
     CDS             complement(4423..4953)
                     /locus_tag="AC1PJC_001482"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003060986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HIP6620466.1"
                     /translation="MRRLVLNIAMSLDGFIARKDGSYDWIEGHGTDKYDTVLQFDNQN
                     FFNNCDTVVMGRKSLEDCPLEMIEGHQEKQFIVASHTEQTDYDNVRFVRDVIGEIMEL
                     RSREGGDIWLFGGASLVQDCFEAGVIDHLIIGIIPTILGDGIPLFASLLEEKKLLLVE
                     STVTDGIAMLRYDIRR"
     gene            complement(5355..6308)
                     /locus_tag="AC1PJC_001483"
     CDS             complement(5355..6308)
                     /locus_tag="AC1PJC_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIP6620467.1"
                     /translation="MNVSILALLISQMLIYSAPLIFTSLGGVFSERGGIVNVGLEGIM
                     VIGAFAGVVFNIEFAGTFGNATPLLAVIVGGLAGVIFAAIHAMATINFRADHVVSGTV
                     LNLLAPALGVFLVKVIYNKGQTDSITESFGKFSFPILADIPIIGEIFFKNTSLMGYVA
                     IATAFLAWFILYKTKFGLRLRSVGEHPQAADTLGINVYAMRYAGVLIAGFLGGVGGAV
                     SAQSVNINFSATTIVGSGFIALAAVIFGKWNPIGAMLASLFFGLSQSLAVVGGQLPGL
                     KDIPTVYLQIAPYLITVIALSAFFGKAVAPKADGINYIKSK"
     gene            complement(6310..7371)
                     /locus_tag="AC1PJC_001484"
     CDS             complement(6310..7371)
                     /locus_tag="AC1PJC_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017768037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIP6620468.1"
                     /translation="MLNKYKNLALPLMAVVSGILLGAIVMLVFGYDPIWGYEELFYSA
                     FGNIKSIGEIFRAMAPLVFTALGFAVASRAGFFNVGLSGQAYVGWVFAGWFALANPDL
                     PRPVLILGTVLIAMLAGGIAGAIPGILRAYLGTSEVIVTIMMNYILLYSCNYIIRDVF
                     ADSLMKNTDSTVNVSANASYQTEWLRALTDNSRMNIGIFFAIIAVFVIWFLLTKTTLG
                     FEIRSVGLNPTASDYAGMSAKRTIILSMIISGALAGLGGAIQGLGTFQNVYIQSGNLD
                     IGFNGMSVALLASNSPLGIPLAAFLFGVLSVGAPGMVRGQIPPELINVVTASIIFFIG
                     VKFIFEQLLKSRNKAKGAK"
     gene            complement(7364..8899)
                     /locus_tag="AC1PJC_001485"
     CDS             complement(7364..8899)
                     /locus_tag="AC1PJC_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6620469.1"
                     /translation="MTKDYVIEMRNITKIFGEFVANDHINLNVRRGEIHALLGENGAG
                     KSTLMNMLAGLLEPTSGEIVINGQSVKIDSPSKAAQLGIGMVHQHFMLVDAFTVAENI
                     ILGSETTKGGVIDLKKAIAEIKELSAKYGLEVDPTAKVADISVGAQQRVEILKTLYRG
                     ADLLIFDEPTAVLTPAEIAELLKIMKALVEEGKSIILITHKLDEIRAVADSVTVIRRG
                     KSIETVAVEGATNQDLAEWMVGRSVSFKTEKVEASPKEVILSIKDLVVNENRGIPAVK
                     GLSLDVRAGEVVGIAGIDGNGQSELIQAITGLRKVKSGSITIKGEEVVGKTPRKITEM
                     QVSHVPEDRHRDGLVLPMTVAENFALQTYYKEPISKNGILNYNIINEKARALMEEFDV
                     RGASELVPIKALSGGNQQKAIIAREIDRNPDLFIVSQPTRGLDVGAIEYIRKRLIAER
                     DKGKAVLVVSFELDEILDVSDRIAVIHDGVIHGIVEPAKTNKQELGVLMAGGHIEKGE
                     EHA"
     gene            complement(9094..10161)
                     /locus_tag="AC1PJC_001486"
     CDS             complement(9094..10161)
                     /locus_tag="AC1PJC_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family lipoprotein"
                     /protein_id="HIP6620470.1"
                     /translation="MNKKLVGLGLAAVAAVSLAACGNRASKSSSSEASSSADTSVKAA
                     IVTDIGGVDDRSFNQSAWEGLQEWGNAAGLSKGNGYDYFQSANESEYITNLDSAVAGG
                     YNLVFGIGFALESAIAEVAPNNPDTHYVIVDSVVPDQDNVVSVGFADHEASYLAGVAA
                     AKSTKTNHVGFIGGMEGVIIDRFEAGFVAGAKSVNKDIKITVDYAGSFGDAAKGQTLA
                     AAQYAAGADVIFHASGGTGNGVFAAAKAENETRNEADKVWVIGVDRDQSAEGEYTSKD
                     GKSSNFVLASTLKQVGTSVKDIATKAVAGEFPGGQVLQFSLKDKGVELAETNLSEDAS
                     KAVADAKQAILDGKVEVPEKP"
     gene            complement(10242..10631)
                     /locus_tag="AC1PJC_001487"
     CDS             complement(10242..10631)
                     /locus_tag="AC1PJC_001487"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004126 - cytidine deaminase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009972 - cytidine deamination [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HIP6620471.1"
                     /translation="METIDLIELAVKNSQKAYVPYSKFPVSAVLVAKTGEIFTGVNIE
                     NASFGLTNCAERTAIFKAISEGVKDFSEIIIYGETEKPISPCGACRQVMAEFFDKDLK
                     VTLVAKDKSTVEMTVGELLPYSFTDLT"
     gene            complement(10618..11280)
                     /gene="deoC"
                     /locus_tag="AC1PJC_001488"
     CDS             complement(10618..11280)
                     /gene="deoC"
                     /locus_tag="AC1PJC_001488"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011836882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004139 - deoxyribose-phosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0009264 - deoxyribonucleotide catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HIP6620472.1"
                     /translation="MKLNKYIDHTILKPETTQEQVEKILAEAKEYDFASVCVNPTWVA
                     LAAESLKDSDVKVCTVIGFPLGANTPAVKAFETKDAISNGADEIDMVINIGALKTGNY
                     DLVLEDIKAVVAASGDKLVKVIIEACLLTDDEKVKACQLSQEAGADYVKTSTGFSTGG
                     ATVADVALMRKTVGPDMGVKASGGARSYEDAIAFIEAGASRIGASSGVAIMNGAQADG
                     DY"
     gene            complement(11296..12573)
                     /locus_tag="AC1PJC_001489"
     CDS             complement(11296..12573)
                     /locus_tag="AC1PJC_001489"
                     /EC_number="2.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018543466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016154 - pyrimidine-nucleoside
                     phosphorylase activity [Evidence IEA];
                     GO_process: GO:0006213 - pyrimidine nucleoside metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine-nucleoside phosphorylase"
                     /protein_id="HIP6620473.1"
                     /translation="MRAVDLIQKKRDGLELSSEEIKWLIDGYVAGTVPDYQMSALAMA
                     IYFKGMSTREISDLTMSMVATGEQIDLSAIPGIKVDKHSTGGVGDKVTLILAPLVASF
                     DIPVAKMSGRGLGHTGGTLDKLESIKGYQIEVSQEDFIKQVQDTGVAVIGQSDNLVKA
                     DKLLYALRDVTATVDIIPLIASSVMSKKIAAGADAILLDVTVGEGAFMKTVEEARVLA
                     QTMVDLGKAVGRKTVAVLTDMSQPVGTSIGNRLEILEAIEILQGKGREDVTEFICELA
                     QIMLGLANVEKSIEEVRQHIDNGAALKKFEEMVLAQGGDLEDLYRPVQVTQQVAVLAE
                     EDGYLVGLPALEFGLFAMKLGAGRAVKTDDLDYETGIVFHKKVGEAVSKGEQIATIYA
                     NENISENMLTNFRKNVKIDKESVKTKEIIEIIS"
     gene            complement(12570..13160)
                     /locus_tag="AC1PJC_001490"
     CDS             complement(12570..13160)
                     /locus_tag="AC1PJC_001490"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HIP6620474.1"
                     /translation="MSNMYYEKNPTVAHDIHEIHVNLLDTPMSFMTDAGVFSKKMVDY
                     GSQVLLKTLHFEKGASVLDVGCGYGPIGLTLSKVFSTKTTLIDINSRALDLATKNAER
                     NGVTAKIYQSNIYENVDETFNHIVSNPPIRAGKSVVHEVIAGAFQRLEANGTLTIVIQ
                     KKQGAPSAKAKMEEVFGNCQIIKKDKGYYILESVRE"
     gene            13269..14189
                     /gene="coaA"
                     /locus_tag="AC1PJC_001491"
     CDS             13269..14189
                     /gene="coaA"
                     /locus_tag="AC1PJC_001491"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009568566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004594 - pantothenate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HIP6620475.1"
                     /translation="MKNEFLNFEQIDRATWQQLHRKTTIPLSQSELNSIKSFNDRIQL
                     HEVSDIYLPLVNLIHIYRKARKDLNFTKSLFLQKTIKPQPFIIGVSGSVAVGKSTTSR
                     LLQILIARTFKHAKVELVTTDGFLHPNAVLEERQLLNKKGFPESYDMEKLIDFLDKIK
                     NGYDCQIPVYSHEIYDIVPNKTQEIKSPDFLIVEGINVFQNPQNQRLYVSDYFDLSIY
                     VDADVEHIETWYLERFQKLLTLAKNDPNNYYHRFTQMTYPEILSIAQNTWKNINLANL
                     EKFIEPTRNRADIILHKAENHEIDKIYLKK"
BASE COUNT         4331 a         3273 c         2460 g         4153 t
ORIGIN      
        1 agatgtttta ttgtccataa tcatactgat tataactctt attgaaggaa tctaagatgt
       61 cttttgcagt tccattatat ggagttgttg attcaagaac tccttttaca atgatacgtt
      121 gtgttgcatt atagtccgta catgttacca aggtaacttc tgtacgtcct tctacatcat
      181 caatgacata gacactttca ggcgaaacaa tttccacact atcaataacg taggtgtaaa
      241 cattggtctt gtcagtaata tagattttca tgccgttttt agcacgatca agcggtgaaa
      301 agagaacatc tgccgcacca gttacaccaa aaatatggtg gctagccaac gcataatttc
      361 ctttccccat ctcttggttt tccttcatgg taccagctcc atacatgagc gaagtattga
      421 agaccccttt aaaaatagga aggttgatgc caagctcggg aaccgcaatt ccaccaatta
      481 caggtaagcg ttgtgcatcc cactgagctg ctaaaatagc ctctgtagaa atagactgaa
      541 cctgatcgaa atcaaatgtt gtttcagcct gtttattctt tttgatatcc tctgtcgtaa
      601 cattgctaat ctggtattta ttcgtattcc agccgataat aaaattacgg atagaggtgt
      661 tgaatattaa cgctagggaa atcagtatca atacaactgt taaaagattg cgccaaaaag
      721 aacctttacg cttcttcttt ttttcacgtt ttgacatgat tgtttattcc ttttcttctt
      781 taatttcagc agcatctacc aaggcaaagg tcatgatttt cgcttcatca ttcaagcgca
      841 tcacttttac acccatggtt gaacgaccag tttgagagat attcgcaaca cttgtacgaa
      901 taatcacgcc agtatcggta ataaccataa tatcttcatc accagatacc gttgtcaaac
      961 ctgccagaga accattcttc tcagcaactt taagagtctt gataccctta ccaccacgac
     1021 ctttggttgg atactcactg gctggtgtac gtttaccaaa acctttttcc gtcaatacga
     1081 gtacttcttg gtcatcagaa atcatagtag cgccaactaa ctggtctccc tcgcgtaaat
     1141 tgataccacg aacacctgtt gctgtacggc ccatattacg aacatctgtt tcagtgaaac
     1201 gtacagaata accgaactta gtccccataa taatgtctgc ttggccattt gttaagaaaa
     1261 cattgatgag ttcatcgtct tctttcaaat tcaaagcttt cagaccgctc tggcgaatat
     1321 tggcaaattc tgacacacta gtccgtttta caacaccttg gcgggttgca aagaagagat
     1381 aactatctgc ctcctggtcc ttagttacat tgataatggt ttgaattgcc tcgttttctt
     1441 ccaatttaag caaattgact actggaagtc cctttgcagt acgaccatat tctgggattt
     1501 catagccttt gagacggtaa acacgtccct tgttagtgaa gaagagcaag cgatcatgag
     1561 tgcttgtaga gactaattct cgtacaaaat catcatcctt gacgccagtt ccttgaacac
     1621 cacgtcctcc acgcttctga gcttgaaact catcctgtgc taaacgcttg atgtagcctt
     1681 ggtttgacaa agtgattaaa acatccgttt cttcaatcaa gtcctcatct tcaagggaaa
     1741 gaacttcacc aaccatcaat tctgtacggc gtgggtcagc atatttacgt ttgacttctt
     1801 ctaattcgtc tttaataatc tgaacaacac gctcaggctt agctagaata tcagccaaat
     1861 ctgcaatcaa cgccactaac tcatcatatt ctgattgaat cttgtcgcgt tccaaacctg
     1921 tcaaacgacg aagacgcata tcaagaatag cctgactctg acgttcagaa agctcaaatt
     1981 tctccatcaa ttcagcttga gcaatagcat ccgtttctga attacggata atgcgaatga
     2041 cttcatcaat atggtcaaga gcaatcagca agccttctaa gatatgagca cgcgcctcag
     2101 ccttttcttt atcaaatcgt gtacgacgag tgactacttc tttttggtgt tcaatataag
     2161 actctagaat ctgacgtaca gaaaggattt tcgggacacc attttggatg gccaacatat
     2221 tgaaactaaa gttggtttga agctgtgttt gcttgaatag gttattcaaa ataacgttag
     2281 cagaagcatc acgacgaact tcgataacaa atcgtacacc ctcacggttg gattcgtctc
     2341 gaacagcagt gattccttca atacgttttt cttggactaa tttgacaata tgttcttgaa
     2401 ccttggactt attgaccatg tatggaaact ctgtaacaac aatgcgctca cgaccatttc
     2461 catattcttc aatctctgtg cgggaacgaa gaactattga acctttacca gtttcataag
     2521 cacggtgaat tcctgatttc cccataacca aggcacctgt cggaaaatct ggtccaggca
     2581 agacttccat aatctcacgt gttgttacct cgggattgtc cataaccagc ttaactgcct
     2641 cgatagtctc acccaagttg tgtggaggaa tgttggtagc cataccaacg gcgataccag
     2701 tcgttccgtt aaccagaagg ttagggaaac gagcaggtaa aacctcaggc tcacgttcac
     2761 tcgcgtcata gttatctgca aaatttaccg tgttcttgtt aatatcacga agcatttcaa
     2821 gcgcaatctt gctcatgcgt gcttctgtat aacgctgagc ggctgctccg tcgccatcca
     2881 tggaaccaaa gtttccgtga ccatcaacta acatgtgacg gtagctccac cattgtgcca
     2941 tacgaaccat tgcttcgtaa atcgcactat ctccatgcgg gtgatattta cccataacat
     3001 cccctgtgat acgggctgat tttttatgtg gtttatccgg tgtaattcct aattcattca
     3061 tcccatacaa aatacggcga tgaaccggct tcagaccatc acgtacatca ggcagagcac
     3121 gtgaaacgat aacactcatc gcatagtcga tgaaggatga tttcatctca ttggtcagat
     3181 taaccgttac taaattttta tcttgcatta tatgcctctt tcaacagtca ttgtgcttct
     3241 attataccat attggcgaat aaatttcttt gttggaaact agcatgtaaa cattttcaaa
     3301 ggcgctttca caagtgacaa aaagcttaaa acatgctaga atgtattatg gtcgggatga
     3361 agtcatcccc aaataaaact aaggagatgt ttagcaatga ctgcaactaa acaacacaaa
     3421 aaagtaatcc ttgtcggtga cggtgccgta ggttctgctt atgcttatgc tcttgttaac
     3481 caagggattg gtcaagaatt gggtatcatc gatatcaaca aagaccgtac tcaaggtgat
     3541 gcagaagact tgagccacgc attggccttc acattcccta aaaaaatcta ctctgctgag
     3601 tattcagatg ctcatgacgc agacttggtt gtattgacag ctggtttgcc acaaaaacca
     3661 ggtgaaactc gccttgaatt ggtagagaaa aaccttcgta tcaaccaaca aatcgttaca
     3721 gaaatcgtta actctggttt caacggtatc ttccttgttg ctgctaaccc tgttgacgta
     3781 ttgacttact caacttggaa attctctggt ttccctaaag agcgtgttat cggttctggt
     3841 acttctcttg actcagctcg tttccgtcaa gcattggctg agaaaatcgg tatcgacgca
     3901 cgttcagttc acgcttacat catgggtgag cacggtgact cagaatttgc agtttggtca
     3961 catgccaacg ttgctggtgt gaaattgtac gactggttgc aagataaccg cgatattgat
     4021 gagcaaggtc ttgttgactt gtttgtatct gttcgtgatg cagcctactc aatcatcaac
     4081 aaaaaaggcg caacttacta cggtatcggt gttgcacttg cacgtatcac taaagcaatc
     4141 tttgatgatg aaaatgcagt acttccattg tcagtttacc aagctggcca atacgaaggg
     4201 gttgaagatg tcttcatcgg tcaacctgct atcatcggtg cccacggtat cgttcgtcca
     4261 gtcaatatcc cattgagcga agctgaattg caaaaaatgc aagcatctgc taaacaattg
     4321 aaagacatca tcgatgatgc tttcgcaaac ccagaaattg cagctggtgt aaaaaactaa
     4381 ttatataaaa tagtaaaaaa ggtgagcaat agctcgcctt ttttaccttc taatatcata
     4441 acgtaacata gcaattccat ctgtgacagt tgactctacc aagagcaatt tcttttcttc
     4501 caaaagtgag gcaaaaagtg gaataccgtc acccaaaata gtaggaataa tcccaataat
     4561 aaggtgatca atcactcccg cctcaaaaca gtcctgaacc agacttgccc caccaaacaa
     4621 ccaaatatct ccaccttctc gagagcgaag ttccataatc tctccgatga cgtcccttac
     4681 gaaacgcaca ttatcatagt ccgtctgctc agtatgactc gcaacgataa attgcttttc
     4741 ctgatgtcct tcaatcattt ccaacggaca atcttctaat gattttctcc ccatcacaac
     4801 tgtatcacag ttgttaaaga aattttgatt atcaaactgt aagaccgtat cgtatttatc
     4861 ggtaccatgt ccttcaatcc aatcgtagct tccatcctta cgtgcaataa atccatctaa
     4921 actcattgca atatttaaca ccaatcgtct cacaattaac ctcatttcat accttagtga
     4981 caaactatta taccagtcat tcttcctatt ctcaaccaaa agtccctata actcctcttc
     5041 ctttgaatag gacaattatt catttcccat acagcaaaga acatgataaa aaggcccact
     5101 gtacctttca aaacctagac aaactcctaa aaatatataa aaaattgaag aagtttgcga
     5161 aagatagcaa gtcattaaac tcttagaaac attgatattt cggcatttct gagaactttt
     5221 ttattttcaa cataaagaaa aaaagattga agaaaattga ccaaaatgga ctttttcttc
     5281 aatctgaaag gtccactgga ccttattcgc ttccgtattt tcaagctcat gataaaaagg
     5341 tccactggac ctttttattt agatttgata tagttgatac cgtctgcttt aggagcgact
     5401 gctttaccaa agaaagcaga cagggcaata acagtaatca aatatggtgc aatttgaaga
     5461 taaaccgttg gaatatcttt taatcctggt aattgtccac ccactactgc taaactttgc
     5521 gaaagaccga agaatagact ggcaagcata gcgccaattg gattccactt accgaaaatt
     5581 acagctgcta gagcgatgaa acctgaacct acgattgttg ttgcagagaa gttgatattc
     5641 actgattgag cacttacagc tccaccaaca ccaccaagga aaccagcaat caacacacct
     5701 gcataacgca tagcgtagac attgattccc aaagtatccg ctgcctgcgg atgttcacct
     5761 actgaacgaa ggcgcaaacc gaacttggtt ttataaagga tgaaccaagc aagaaatgct
     5821 gttgcaatag ctacataacc catcaagctt gtatttttga agaaaatttc accaatgatt
     5881 ggaatatctg ccaagatagg gaatgaaaat ttaccaaatg attcagtaat actatcagtt
     5941 tgacccttat tatagataac cttgactagg aaaactccca atgctggagc caaaaggttc
     6001 aacaccgtac ctgatacaac gtggtctgca cggaaattaa tcgtcgccat cgcatgaata
     6061 gcggcaaaga taacaccagc aagacctcct acaataacag ctaataatgg agtagcatta
     6121 ccaaatgtcc ctgcaaattc gatattgaaa acaacaccag caaaggcacc gataaccatg
     6181 attccttcta gaccaacgtt tacaatacca ccgcgttcag agaaaactcc tccaagactg
     6241 gtaaagatta agggtgctga ataaatcaac atttgcgaaa tgagtaaggc aagaattgaa
     6301 acattcatct tatttcgctc ctttcgcttt atttctagat tttaataatt gttcaaaaat
     6361 aaatttcaca ccgataaaga aaatgattga tgccgtaaca acgttgatca attcaggtgg
     6421 aatctgtcca cgtaccatac ctggggcacc gacagaaaga acaccgaata gaaaggcagc
     6481 caatggaata cctaacggtg aattagaagc taaaagcgct actgacatac cattaaaacc
     6541 aatatccaag ttaccgcttt ggatataaac gttttggaaa gtacccaaac cttggatagc
     6601 tcccccaaga cccgcaagag cacctgaaat aatcatagat agaataatcg tacgtttcgc
     6661 agacataccc gcataatccg atgctgttgg gttaagcccc actgagcgaa tctcaaaacc
     6721 aagagtcgtt ttagtcaata ggaaccaaat cacaaaaact gcaataatgg caaagaaaat
     6781 accaatattc atacgtgagt tatctgtcaa tgcacggagc cactctgttt ggtaagaggc
     6841 atttgctgac acgttaactg tcgagtctgt attcttcatc aaactatctg caaatacatc
     6901 acgaatgata tagttacatg aatagagtaa gatgtagttc atcataatcg taacgataac
     6961 ttcacttgtt cccaaatagg cacgtagaat acctggaata gctccagcaa taccgcctgc
     7021 caacatagca attaagactg ttcccaaaat caaaactgga cgtggtaagt caggatttgc
     7081 caaggcaaac catccagcaa aaacccaacc aacataggcc tgaccagaca aaccaacgtt
     7141 gaagaaacct gcacgactag ctactgcgaa accgagagca gtgaaaacaa gtggtgccat
     7201 tgcacggaaa atttcaccaa ttgatttgat attaccaaaa gctgaataga ataactcttc
     7261 atagccccaa attggatcgt agccaaaaac aagcatgaca atcgctccaa gtaggatacc
     7321 actgaccaca gccattaatg gaagggccaa attcttatat ttattaagca tgttcttctc
     7381 ccttctcaat atgtccacct gccatcaaga cacctaactc ttgtttattg gtcttagcag
     7441 gttcaacaat accatggatg acaccatcat ggataacagc aattctatct gatacatcca
     7501 aaatttcatc caattcgaag ctgacaacaa gaacagcctt acccttatca cgttctgcaa
     7561 tgagacgttt acgaatatac tcaatagcac caacgtccaa accgcgtgtt ggttggctaa
     7621 caatgaaaag gtctgggttg cgatcgattt cacgcgcgat gatagctttt tgctggttac
     7681 cgcctgaaag agccttgatt gggacgagtt cacttgcccc acgaacgtca aattcttcca
     7741 ttaacgcgcg tgctttttca ttaatgatat tatagttcaa gataccattt tttgaaatcg
     7801 gttctttata gtaagtttga agcgcaaagt tctcagcaac agtcatcgga agaacgagtc
     7861 catcacgatg acgatcttcg ggaacgtggc tcacttgcat ttctgtaatt ttacgtggag
     7921 ttttaccaac tacttcctca cctttaatag tgattgagcc agattttacc ttacgtaaac
     7981 cagtgattgc ctgaatcaac tcactttgac cgtttccgtc gataccggca ataccaacaa
     8041 cctcacctgc tcgaacatca agcgacaagc ccttaactgc tggaatacca cggttttcat
     8101 tgacaaccaa atccttaatt gacaaaatga cttctttagg actcgcttca actttctctg
     8161 ttttaaagga aacggaacgt ccaaccatcc actcagccaa atcttggttt gttgctcctt
     8221 caacggcaac tgtttcgatc gatttacctc gacgaataac tgttacacta tcggcaactg
     8281 cacgaatttc atccagtttg tgcgtaatca aaataataga tttaccttct tcaaccaagg
     8341 ctttcataat tttcaagagc tctgcaattt ccgcaggggt caatacagct gtcggctcat
     8401 caaaaattaa aaggtctgct ccacgataaa gtgttttaag gatttctaca cgttgctgtg
     8461 cccccacaga aatatctgca acctttgcag ttggatcaac ttcaagacca tatttagcag
     8521 aaagttcttt aatttctgcg atagcttttt taaggtcaat cacgccacct ttggtggttt
     8581 cagaaccaag aatgatgttc tcagcaactg tgaaagcatc aaccaacata aagtgttggt
     8641 gcaccatacc aatacccaat tgagcagctt tggatgggga gtcaatcttc acggattgac
     8701 cgttgataac aatttcaccg cttgtaggtt ccaacaagcc agcaagcatg ttcatcagag
     8761 tagatttacc cgcaccattc tcaccaagaa gggcatggat ttcaccacgt ctgacattca
     8821 aattgatgtg gtcatttgct acaaattcac caaatatctt agtgatattg cgcatttcaa
     8881 tgacataatc cttagtcata atctattatc ctttctgact atagccttct gaaaattctt
     8941 cagtactact ttagtacctt aaaattcttc atcaactata ccatttttgt cagtaaaacc
     9001 taccatagct gataggcttt actgagaaaa atctcagccc gaaaacggcg accccgtcgg
     9061 gtcgccgaat cggaattgtc gaaaagaaat tcattaaggt ttttcaggaa cttctacttt
     9121 accatccaag atagcttgct tagcatctgc aactgcttta gaagcatctt ctgaaaggtt
     9181 agtttctgcc aattcaacac ctttatcttt caatgagaat tgaagtactt gaccaccagg
     9241 gaattcacct gcaacagctt tagttgcaat atctttaact gaagtaccaa cttgtttcaa
     9301 tgttgaagcc aatacaaagt tagaagactt accatcttta gaagtgtatt caccttctgc
     9361 tgattggtca cggtcaacac cgattaccca aactttatct gcttcattac gagtttcatt
     9421 ttctgcttta gcagcagcaa atacaccgtt accagtacca ccagaagcgt ggaagatcac
     9481 gtctgcacct gcagcatatt gagcagctgc aagagtttga cctttagcag catcaccaaa
     9541 tgaacctgca tagtcaactg taatcttgat gtctttgttt acagacttag cacccgcaac
     9601 gaaaccagct tcaaagcgat cgatgataac accttccata ccaccgatga aacctacgtg
     9661 gtttgtttta gttgacttag ctgcagcaac accagcaaga tatgatgctt catggtctgc
     9721 gaaacctacg ctaactacgt tgtcttgatc tggaacaaca ctatccacga ttacatagtg
     9781 tgtgtcagga ttatttggcg caacctcagc aatcgcactc tccaaggcaa aaccaatacc
     9841 gaacacaagg ttgtaaccac cagcaacagc tgaatcaagg tttgtaatgt attctgattc
     9901 attagctgat tggaagtaat cgtagccatt acctttagaa agaccagctg cattacccca
     9961 ttcttgaaga ccttcccatg cagattggtt gaatgaacgg tcatcaacac caccaatgtc
    10021 agtaacgata gcagctttca cagatgtgtc cgctgatgaa gatgcttctg agctactgct
    10081 ttttgaagca cggttaccac atgcagccaa agatacagcc gcaacagctg ctagaccaag
    10141 tccaacaagt ttcttgttca tttctgaacc ctcctaaaaa tctttttgca actacattgt
    10201 tgcagagtaa tattgctaca gtcaaatgac tgtcatacag actaggttaa gtctgtaaag
    10261 gaatatggaa gtaattcccc gactgtcatc tcgactgtcg atttatcttt agcgaccaag
    10321 gtcactttta aatccttatc aaaaaattct gccataactt ggcgacaagc tccacaagga
    10381 gatattggct tttctgtttc accataaata atgatttcag aaaaatcttt cacaccttca
    10441 gaaatggcct tgaaaatagc tgtcctttca gcgcaattgg tcaaaccaaa gcttgcattt
    10501 tcaatgttta cacccgtaaa tatttcccct gtcttagcta caagaactgc actaactgga
    10561 aactttgagt acggtacgta tgctttctga ctgtttttta cagctaattc aattaaatca
    10621 atagtctcca tccgcctgtg ctccattcat gattgcaacg cctgatgacg caccaatacg
    10681 agacgcccct gcttcgataa aggcaatggc atcttcatac gaacgtgcac cacctgaagc
    10741 cttcactccc atgtcaggac ccactgtttt tctcattaag gcaacatccg ctactgtagc
    10801 accgcctgta gaaaatcctg tagatgtttt aacatagtcc gcaccagctt cttgagataa
    10861 ttgacaagct ttcactttct catcatcagt aaggaggcat gcttcgatga taactttgac
    10921 tagtttatca ccacttgctg ctacaacagc tttaatatcc tccaaaacca aatcgtaatt
    10981 tccagttttc agagcaccga tattgataac catgtcaatc tcatctgctc catttgaaat
    11041 tgcatctttt gtttcgaatg cttttacagc aggggtgttt gctccgagag ggaaaccaat
    11101 aaccgtacaa acttttacat cactatcttt caagctttca gctgctaaag cgacccaagt
    11161 tgggttaaca cagacacttg caaaatcata ttcttttgct tctgccaaaa tcttttcaac
    11221 ctgctcttgt gttgtctcag gtttcaagat tgtatggtca atatatttat tcaatttcat
    11281 agttttctcc gtacattaag aaataatctc tatgatttct ttcgttttta cactttcttt
    11341 atctatttta acattttttc ggaaatttgt aagcatgttt tccgaaatat tttcattggc
    11401 ataaatcgtt gcgatttgtt cacccttaga aacagcttcc cctactttct tatggaagac
    11461 aatacctgtt tcataatcta aatcgtctgt cttgactgca cgacctgcac caagtttcat
    11521 tgcaaagaga ccgaattcca acgcaggaag ccctacaagg tatccatcct cctccgcaag
    11581 aactgcaact tgctgtgtaa cctgaactgg acgatataaa tcttctaagt caccaccttg
    11641 agcaaggacc atctcttcaa atttcttcaa agctgcacca ttgtcaatat gttggcgtac
    11701 ttcttcaatg cttttctcaa catttgcaag ccccaacata atttgggcta gttcacagat
    11761 aaattcggta acatcttctc gacctttacc ctgtaaaatt tcaatagcct ctaaaatttc
    11821 caaacgattt ccaatcgaag ttccaactgg ttgagacatg tcagttaaaa cagcaacggt
    11881 cttacgccca accgccttgc caagatccac catggtttga gctagaaccc gtgcttcttc
    11941 aacggtcttc atgaaggcgc cttctcccac tgttacatct agaagaatcg catccgcacc
    12001 tgcggcaatt ttcttagaca ttaccgagct agcaatcagt ggaataatgt caacggttgc
    12061 tgtcacatct cgaagggcat agagcaattt atcagctttg acaagattgt ctgactgtcc
    12121 gataactgca acaccagtat cttgaacttg cttgatgaaa tcttcttgac taacttcaat
    12181 ctggtatcct ttgattgact ctaacttatc caaggttcca ccagtatgac caagtccacg
    12241 accgctcatc tttgcaactg gaatatcaaa acttgctacc aatggcgcta agatgagtgt
    12301 gaccttatct ccgacaccac ctgtagaatg cttatctacc ttgatgcctg gaattgcaga
    12361 taaatcaatc tgttcacccg ttgcaaccat agacattgtc aaatcagaaa tctcacgtgt
    12421 tgacatccct ttgaaataaa tcgccatcgc caaggctgac atttgataat ccggtactgt
    12481 cccagctaca tatccatcaa tcaaccattt gatttcttca gacgatagtt ctaagccatc
    12541 acgctttttt tgaattaaat caactgctct cattctctca cactttcaag gatgtagtaa
    12601 cccttgtctt tctttataat ctggcagttg ccgaacacct cttccatctt agccttggca
    12661 ctcggtgcac cttgtttctt ttgaatgaca atggtcaagg ttccgtttgc ctctaagcgt
    12721 tgaaaggctc cagcaattac ttcatgtaca accgattttc cggcccgaat aggtggattt
    12781 gaaacaatat gattgaatgt ttcgtccacg ttttcgtaga tattggattg ataaatttta
    12841 gcggtaacac cattcctctc agcatttttt gtagctaaat ccaaagctct gctattaata
    12901 tcaatcagtg ttgtcttggt gctgaacacc ttagaaagtg tcaaaccaat tggtccataa
    12961 ccacaaccaa catccaacac cgatgcccct ttttcaaaat gaagggtttt taaaagcact
    13021 tgactaccat aatcaaccat cttcttgcta aaaacacctg catctgtcat gaaagacatt
    13081 ggggtgtcta gtaagtttac gtggatttca tgaatatcat gtgctactgt aggatttttt
    13141 tcgtaataca tattggacat gtacttatta taacatttcc taaaaacgtt ttcaagagtt
    13201 tttcttacat gaaaaatatg ataaaatgaa atcgatattg aaacgcttac ctataggaag
    13261 aattatgtat gaaaaacgaa tttttaaatt ttgaacaaat tgaccgagcc acttggcaac
    13321 aactacaccg taagactacc attccactta gtcaaagtga actaaattct attaaaagtt
    13381 ttaacgaccg cattcaatta catgaggttt ctgacatcta tcttcctttg gttaatctta
    13441 tccatatcta tcggaaagca cgcaaagacc taaattttac gaagagttta tttctacaga
    13501 aaactatcaa gcctcaacca tttatcattg gcgtttctgg aagtgttgct gtcggcaaat
    13561 caacaactag tagattgctg caaattctta tcgctcggac atttaaacac gccaaggttg
    13621 aattagtgac aacagatggt tttctccatc caaatgcggt cttagaagaa cggcaactgt
    13681 taaataaaaa aggttttcct gaatcctatg acatggagaa attgattgat ttccttgata
    13741 agataaaaaa cggctacgac tgccaaattc ctgtctattc acatgaaatc tatgatattg
    13801 tccccaacaa aactcaggaa attaagtctc cagatttctt gattgttgaa ggaatcaatg
    13861 tatttcaaaa tccacaaaac cagcgcctct atgtcagtga ctattttgac ctgtctatat
    13921 acgttgacgc tgatgtggag catattgaaa cctggtactt ggagcgattc caaaaattat
    13981 tgacattggc aaaaaatgac cctaacaact attaccatcg ttttacccag atgacatacc
    14041 ctgagattct atctattgcc cagaatactt ggaaaaatat taatctagct aacttagaaa
    14101 aattcattga accaaccaga aaccgtgctg atattattct tcataaggcc gaaaaccatg
    14161 agattgataa aatttatcta aaaaaataaa tttcacttgt caaaaatact cttttca
//
LOCUS       DBNFCX010000057        14209 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.057, whole genome shotgun sequence.
ACCESSION   DBNFCX010000057 DBNFCX010000000
VERSION     DBNFCX010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 14209)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14209)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14209
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.057"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(239..784)
                     /locus_tag="AC1PJC_001492"
     CDS             complement(239..784)
                     /locus_tag="AC1PJC_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ECF-type riboflavin transporter
                     substrate-binding protein"
                     /protein_id="HIP6620476.1"
                     /translation="MKNNSIKTVVATGIGAALFVVIGHLINIPTFVPNTSIQLQYAVQ
                     SLLAVVFGPVVGFLVGFIGHTLKDSLTYGPWWSWILASGVFGLVVGLTKKRLRIQEGI
                     FEGKDILFFNLVQIAANVLAWGVIAPVLDILIYSEAANKVFAQGLVAGIANSITVAIA
                     GTLLLAVYAKSQTKTGSLSKD"
     gene            complement(805..1653)
                     /locus_tag="AC1PJC_001493"
     CDS             complement(805..1653)
                     /locus_tag="AC1PJC_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SAM hydrolase/SAM-dependent halogenase family
                     protein"
                     /protein_id="HIP6620477.1"
                     /translation="MSNNLLVLQSDFGLVDGAVSAMIGVALQESRDLVVHHLTHDITP
                     YNIFEGSYRLFQTVEYWPEGTTFVSVVDPGVGSKRKSVVALTEQNHYIVTPDNGTLSF
                     IKKYVGIKAVREISEVANRRANTEHSYTFHGRDVYAYTGAKLASGHISFEEVGPELSV
                     DKIVEIPTVPTEVSSDYVKGAIDILDVRFGSLWTSITREEFYTLQPQFEDRFEVTIYN
                     NDMLVYQNQVTYGKSFADVRIGQPLIYINSLYRVGVAINQGSFAKAYNVGVGQNWHIE
                     IKRISN"
     gene            complement(2089..2805)
                     /locus_tag="AC1PJC_001494"
     CDS             complement(2089..2805)
                     /locus_tag="AC1PJC_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015604432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HIP6620478.1"
                     /translation="MGRKWANIVAKKTAKDGANSKVYAKFGVEIYVAAKKGDPDPETN
                     SALKFVIDRAKQAQVPRHIIDKAIDKAKGNTDETFVEGRYEGFGPNGSMIIVDTLTSN
                     VNRTAANVRSAFGKNGGNMGASGSVSFMFDKKGVVVFAGDDADAIFELLLEADVEVDD
                     VEAEDGTITVYTAPTDLHKAIVALKESGIQEFNVTELEMIPQSEVSLDGDDLATFEKL
                     YDALEDDEDVQKIYTNVDGF"
     gene            complement(2914..5082)
                     /locus_tag="AC1PJC_001495"
     CDS             complement(2914..5082)
                     /locus_tag="AC1PJC_001495"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015144 - carbohydrate transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit IIBC"
                     /protein_id="HIP6620479.1"
                     /translation="MKKFLSFEFWQKFGKCLMVVIAVMPAAGLMVSIGNSIPLISPES
                     ELLIRIGNIIAQIGWGIIGNLHLLFALAIGGSWAKEKAGGAFSAGLAFILINLITGHF
                     FGVTTDMLADAAATVTTVFGTEIPVSGYFVNILGQPALNMGVFVGIIAGFVGATTYNK
                     YYNYRKLPDVLTFFNGKRFVPFVVIYRSVLVALGLAIFWPVVQTGINSFGKWIASSQD
                     TAPILAPFVYGTLERLLLPFGLHHMLTIPMNYTSLGGTYDILTGAQAGTQVFGQDPLW
                     LAWITDLINLKDAGDMAQYNDLLANITPARFKVGQMIGSSGILMGLTYAMYRNVDEDK
                     KHKYKGMFISSALAVFLTGVTEPIEFMFMFAAMPLYVVYAFVQGAAFAMADIVNLRMH
                     SFGNIEFLTRTPMAIKAGIGMDVINFIWVTALFAVGMYFIANFMIKKFNLATAGRNGN
                     YDTETTDVVSNSNVDTADANSQVVQIINLLGGRDNIADVDACMTRLRVSVKDVAQVGD
                     ENAWKQAGAMGLIIKDSGVQAVYGPKADVLKSDIQDLLESGVAIPRTEIVATEEVAPE
                     TQFKGVTETVYSVAEGQAIAITEVKDPVFSQKMMGDGYAVEPSSGNVYAPVSGIVTSV
                     FPTKHAVGILSDKGVEVLVHVGLDTVALNGAPFSAKVTDGQRVEAGDLLLVADLDAIR
                     SAGRETTIVVAFTNTAEIKSVSLGNLGQVSQDSQVATVEL"
     gene            complement(5116..5907)
                     /locus_tag="AC1PJC_001496"
     CDS             complement(5116..5907)
                     /locus_tag="AC1PJC_001496"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HIP6620480.1"
                     /translation="MKLLTINVHAWLEERQDEKLDVLAQTIAEKAYDVIALQEVNQLI
                     TADLVTKDLKADNYGLILLEKLRALGQFDYSYYWSNSHIGYDKYEEGIAFLTKLPVYE
                     VDPFYCSQNKSVDSILSRKIMGLTVFYQDQLIDLYSCHINLPGSEEEDQLDNIRTIVE
                     RTGNRRFKILMGDFNTDAFSDREAYEAITELGLYDSYNLAMEKDQGITVEKAIDGWAG
                     HSQEKRLDYIFLNQKKEVLSSLVIFNGENRPIISDHFGVEVEINV"
     gene            6106..6813
                     /locus_tag="AC1PJC_001497"
     CDS             6106..6813
                     /locus_tag="AC1PJC_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018367901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UTRA domain-containing protein"
                     /protein_id="HIP6620481.1"
                     /translation="MSKYKKVYQDIKKKIEEQVWSTGQALPTENELMEVYSYSKDTIR
                     KALSLLEMDGYIQKKQGKSSIVIEHGLMKDQYLSEIKTAGELNKRSQHQIHTQLTSLY
                     IIQGQEDLMSTFEVDDKVDFYRVSRVRTIDGERLEYDISYFDRRVVPYLSKEIAESSI
                     YRYLEEELHLTISHSRREISFRFANEEEKQLMDLGDYDMVVVVTSITYLSNGQAFQYG
                     TISYRPDKVSFVSMAKR"
     gene            complement(7042..9306)
                     /gene="glgP"
                     /locus_tag="AC1PJC_001498"
     CDS             complement(7042..9306)
                     /gene="glgP"
                     /locus_tag="AC1PJC_001498"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002992581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004645 - 1,4-alpha-oligoglucan
                     phosphorylase activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan family
                     phosphorylase"
                     /protein_id="HIP6620482.1"
                     /translation="MTKFTTFAETNTSKKLADLTNEEIYLQLLNYVKEAAATKPKNTG
                     KRKVYYISAEFLIGKLLSNNLINLGVYKDIQAELAAAGKSLAQVEDIEPEPSLGNGGL
                     GRLASCFVDSMSTLAINGEGVGLNYHCGLFRQVFKKNEQEAEPNFWIENDSWLIPTTI
                     SYDVPFKNFTLKSKLDRLDILGYKKETKNYLNLFDIESVNYDLITDGISFDKTDIKEN
                     LTLFLYPDDSDKNGELLRIYQQYFMVSNAAQLLIDEAIERGSNLHDLADYAYVQINDT
                     HPSMVIPELIRLLTDKHGIEFAEAVAIVKNMTGYTNHTILAEALEKWPLEFLEEVVPH
                     LVDIIKELDALIRAEIKDPAVQIIDESGRVHMAHMDIHFSNSVNGVAALHTEILKNSE
                     LKAFYELYPEKFNNKTNGITFRRWLEFANQDLADYIKELIGDEYLTDATKLEKLLAFA
                     DDKEVHAKLAEIKFNNKLALKRYLKDNKGIELDENSIIDTQIKRFHEYKRQQMNALYV
                     IHKYLEIKNGNLPKRKITVIFGGKAAPAYIIAQDIIHLILCLSELINNDPEVNKYLNV
                     HLVENYNVTVAEKLIPATDISEQISLASKEASGTGNMKFMLNGALTLGTMDGANVEIA
                     ELAGMDNIYTFGKDSDTIIDLYDKAGYVSADYYNGDANIKRAVDFIVSAEVKALGNEE
                     RLGRLHHELISKDWFMTLIDLAEYIEVKEQVFADYEDQDSWNKKVVHNIAKAGFFSSD
                     RTIEQYNQDIWHSK"
     gene            complement(9299..10807)
                     /gene="malQ"
                     /locus_tag="AC1PJC_001499"
     CDS             complement(9299..10807)
                     /gene="malQ"
                     /locus_tag="AC1PJC_001499"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004134 - 4-alpha-glucanotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HIP6620483.1"
                     /translation="MTNRTSGILMHITSLPGKFGIGTFGQSAYDFVDFLVETKQTYWQ
                     ILPLTTTSYGDSPYQSFSAIAGNTHLIDFDLLVEDGLLATEDFQDVNFGDNPEKVDYA
                     LIYQVRRPILEKAVQAFLQDDKKKAAFLEFEKANSSWLTDYAEFMAIKEYFGNKALQE
                     WDDKKVVARNEEALDKYRLELANQIDYYKVTQYFFFSQWKQLKEYANKHHIKIIGDMP
                     IYVSADSVEVWTKPQLFKLDSERKPLYVAGVPADNFSADGQLWGNPIYDWPEHEKTGY
                     NWWIYRIHESFKLYDVLRIDHFKGFSDFWQVDGKAEVAKVGTWEPGPGYNLFKAVKET
                     LGDLPIIAEDLGNIDAKARKLLADCGYPGMKILEFGFFDVTGKSIDAPHRCIPNSVAY
                     TGTHDNEVVNGWYNNLDPEQQEYVDAYSNRKPIEKVSQAMLRMLFATVSDTAIATMQD
                     VLDLGEESRMNMPSTIGGNWEWRMKAEDLTQERKDFLTKMTLLYQRGNENHD"
     gene            complement(10990..13089)
                     /locus_tag="AC1PJC_001500"
     CDS             complement(10990..13089)
                     /locus_tag="AC1PJC_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HIP6620484.1"
                     /translation="MNNNFNNFNNMDDIFNQLMGNMGGYSTERRRYSINGREVTPEEF
                     AIYRQTGRLPQTEEEAQTQVKGQIKSDGILAKLGRNLTQDAREGKLDPVIGRNKEIQE
                     TSEILARRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGLEA
                     GTQYRGAFEENVQNLVDEVKKAGNIILFFDEIHQILGAGSTGGDSGSKGLADILKPAL
                     SRGELTVIGATTQDEYRNTIHKNAALARRFNEVKVNAPSAEDTYQILKGIKPLYEAHH
                     NIELPDEVLRAAVDYSVQYIPQRSLPDKAIDLVDVTAAHLAAQHPVTDIQTLEAEMAE
                     AKQLQLEAAEKEDYEKALNEKVRIDKLQKQIDNHTEQQKVVATVNDVAQAVERMTGIP
                     VSQMGASDIERLKELKNRLAANVIGQDDAVEAVSRAIRRNRAGFDDGNRPIGSFLFVG
                     PTGVGKTELAKQLALDLFGNKDAIIRLDMSEYSDRTAVSKLIGTTAGYVGYDDNSHTL
                     TERVRRNPYSIVLLDEIEKADPQVITLLLQVLDDGHLTDGQGNQVNFKNTIIIATSNA
                     GFGYGMPEAEENQDIMDRIAPFFRPEFLNRFNAVIEFKHLGKEDLKAIVDLMLTQVNK
                     TLAKKGIQLTVTEAAKEFLMEEGYDQAMGARPLRRVIENQIRDKVTDYYLDHVDVKYL
                     EADVVDGSIQIKEQSFA"
     gene            complement(13509..13919)
                     /locus_tag="AC1PJC_001501"
     CDS             complement(13509..13919)
                     /locus_tag="AC1PJC_001501"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016502986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HIP6620485.1"
                     /translation="MIQPIMKDIFFLQQKSEPATQLDVQVGQDLQDTLAANAHACVGM
                     AANMIGVKKRIIIVNMGFTNLIMYNPVLISKAKPYQTEEGCLSLEGTRPTTRYQEIEV
                     EFFDASWKKQSLKLTDFQAQIVQHELDHLEGIII"
     gene            complement(13916..>14209)
                     /locus_tag="AC1PJC_001502"
     CDS             complement(13916..>14209)
                     /locus_tag="AC1PJC_001502"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620486.1"
                     /translation="VEKLLVEIYYDLQDDNLKQNYIFKRDIEEVEKRKRLFITHLKPT
                     IKINGKQLGSLFTANELESYQDNHFNDGNAVRVRYLKDWQAYFASQTNEGDTP"
BASE COUNT         4066 a         3088 c         2695 g         4360 t
ORIGIN      
        1 taataattat tccaaagaat gcagccataa attgatttcg tcgttttcga ttgataaaga
       61 cttaaaactt cctcgtcagg attgagtata gaatgaataa tcggtcccaa cttttcttct
      121 gtccagacca tacttctccc cttgaacaca tgtttttgtt tgttttatat tattatatca
      181 tatatgtatt tttgggtatt aaaaaaaccc tagaattttt tctagggaaa ataaaaactt
      241 aatctttaga caaactacct gtcttcgttt gagattttgc ataaacagcc aaaaggagtg
      301 tccctgcaat agcaactgta atactgtttg caatacctgc cacaagtccc tgtgcaaaga
      361 ccttattcgc cgcctcactg tagataagaa tatctaaaac tggggcaatg actccccaag
      421 caagcacatt cgccgcaatc tgaacaaggt taaagaaaag aatatctttc ccttcaaaaa
      481 tcccttcttg aatacgtaga cgttttttgg taagaccaac aaccaaacca aagacccctg
      541 atgccaaaat ccatgaccac catggaccgt aagtcaacga atccttaagc gtgtgcccaa
      601 tgaaaccgac caagaagcca accacaggac caaatacaac tgccaatagc gattgaacag
      661 cgtattgaag ctggatagaa gtatttggga caaaggttgg aatattgatt aaatgaccaa
      721 taaccacaaa gagggctgcg ccgataccag tagccacgac tgttttgatt gaattatttt
      781 tcataactat ctcctaaaat ttctttaatt actaatacgt ttgatttcaa tatgccagtt
      841 ttgacctaca ccgacattat aagccttggc aaatgagccc tgattaatcg caacacctac
      901 acgatagagg gaattgatat aaatcaatgg ctgtccgata cgtacatccg caaaggactt
      961 gccataggtt acttggtttt gatacacaag catgtcgtta ttgtatatgg tcacttcaaa
     1021 gcgatcttca aactgcggtt gcaaggtgta aaattcttct ctcgtaatcg aggtccaaag
     1081 cgagccgaat cgaacatcca gaatatcaat tgcacctttt acatagtccg aactaacttc
     1141 cgttgggact gttggaattt ccacaatctt atccacgctt aattctggac caacttcttc
     1201 aaagctaatg tgtccagaag ccaatttagc tcccgtatag gcataaacat ctcgaccatg
     1261 gaaggtgtac gaatgttctg tattggcacg gcgattggcc acctctgaaa tttctcgaac
     1321 cgcctttatc cccacatatt ttttgatgaa ggatagcgtc ccattatctg gcgttacaat
     1381 gtagtgattt tgttcggtca aagctactac actcttacgt tttgaaccaa ctcccggatc
     1441 gacaaccgaa acaaatgttg ttccctccgg ccagtattcg accgtttgaa agaggcgata
     1501 agaaccctca aaaatattgt acggagtaat atcatgagtt agatggtgaa caactaaatc
     1561 tctcgattct tggagagcaa caccaatcat cgctgaaact gcaccatcaa ctaaaccaaa
     1621 atctgattgt aaaacaagta aattatttga catacattct cctaatctta ttaccgttct
     1681 atgataacag aaaacccgtg accattcaaa tagatatttc caaagcctgg ctatagtttt
     1741 tccttatacc tcatctatca agcactctac tatcagccac cgaaaactcc gcaaattttt
     1801 ccatcgtacc ttcttcaaac ttaagctaaa atatccccac ttctctagtt ccaaccaact
     1861 atcgtctttg agtaattgga tataaagaaa accgcctagc gcagttccga tttccagctt
     1921 tctaataaaa ttggcagtcc actggacttt tgagtataaa gaaaactgcc tgccggcagt
     1981 tccaatctcc aaccttttaa taaaaatgac tgtcccccgg acttttgagt ataaagaaaa
     2041 ctgcctgccg gcagttccaa tctccaacct tctaggacgt cccacgtcct agaacccatc
     2101 tacattcgtg tagatttttt ggacgtcttc gtcgtcttcg agggcatcgt agagtttttc
     2161 aaatgttgcg aggtcatcgc cgtcaagtga tacttctgat tgtgggatca tttcaagttc
     2221 agtgacgttg aactcttgga ttcctgattc tttaagtgcc acgattgcct tgtgcaaatc
     2281 agttggagct gtatagacag tgattgtgcc gtcttctgct tctacgtcat ccacttcgac
     2341 atctgcttca aggagcaatt cgaagatggc atctgcatca tcacctgcaa aaacaaccac
     2401 acctttttta tcaaacatga atgatacaga accagatgcc cccatgttac cgccgttttt
     2461 accaaaagca gagcgcacgt tagctgccgt acggtttacg tttgatgtca aagtatcaac
     2521 gataatcata gaaccatttg gtccaaagcc ttcgtaacga ccttccacga aggtttcgtc
     2581 tgtgtttcct tttgccttgt caatggcctt gtcaatgatg tgtcttggaa cctgcgcttg
     2641 cttagcacgg tctataacaa atttcagcgc tgagtttgtt tctggatctg ggtcaccctt
     2701 tttcgctgct acatagattt caacaccaaa tttggcgtaa acttttgagt tagcaccgtc
     2761 ttttgcggtt ttcttggcta caatattggc ccatttacgt cccatgggga acctcctaca
     2821 ttttataaaa tcgctttatt ataccataaa tggcaaggat tgagaagatt tttaaaacaa
     2881 aagacaagct cacatgaact tgtcttttac tttttacaac tcaactgtcg caacttgact
     2941 atcttgacta acctgtccaa gatttccaag gctgacagat ttgatttcag cagtgtttgt
     3001 gaaggcaaca acgatggttg tttcacgtcc tgctgagcga atggcatcca gatctgcgac
     3061 aaggagcaag tctcctgctt caacgcgttg accatctgtt accttagctg agaatggggc
     3121 accgtttagt gcaaccgtat ctaggccgac gtgcaccaag acttctacac ccttgtcaga
     3181 caaaatcccg acagcgtgtt tggttgggaa gacactggtt acgatacctg aaactggtgc
     3241 gtaaacattg ccggagctag gctcaactgc ataaccgtca cccatcattt tttgtgagaa
     3301 gaccggatct ttcacttctg tgatggcaat ggcttgccct tcagcaacag agtaaactgt
     3361 ctccgtcaca cctttgaact gagtctcagg agcaacttct tctgtcgcaa caatttccgt
     3421 acgaggaata gctacgccag attctagcaa gtcttgaatg tcagatttga gtacatctgc
     3481 ttttggtcca tagactgctt gaacacctga gtctttgata atcaagccca tagcaccagc
     3541 ctgtttccaa gcattttcat ctccaacctg tgccacatct ttaacactaa cgcgaagacg
     3601 agtcatacaa gcatccacat ctgcgatatt atcacgacca ccaagcaagt tgatgatttg
     3661 aacaacttgt gaattggcat ccgcagtatc tacgtttgag tttgaaacca catccgttgt
     3721 ttctgtatca tagttaccat tgcgtccagc tgttgctagg ttgaatttct taatcataaa
     3781 gttggcaatg aagtacatac caacagcaaa gagggctgtt acccagataa agttaataac
     3841 atccataccg ataccagctt tgatcgccat cggtgtacgt gtaaggaatt cgatattacc
     3901 aaatgagtgc atacgcaagt tgacaatgtc agccatggca aaagccgcac cttgtacaaa
     3961 agcataaacg acatagagtg gcattgctgc aaacatgaac ataaactcaa ttggttctgt
     4021 tacacctgtc aagaatacgg caagtgctga agaaataaac atacctttgt acttatgttt
     4081 tttatcttca tccacattgc ggtacatagc gtaagtcaat cccatcaaaa tccctgatga
     4141 accaatcatt tgaccaactt tgaaacgggc tggagtaatg tttgcaagaa gatcattgta
     4201 ctgagccata tcaccagcgt ctttgaggtt gatcaagtct gtaatccaag ccaaccagag
     4261 cggatcttgt ccaaatactt gtgtacctgc ttgtgcacct gtcaagatgt cataggtacc
     4321 accaagtgac gtatagttca ttggaatggt caacatgtgg tgcaaaccaa atggaagaag
     4381 caaacgttcc aaggtaccat aaacaaaagg tgcaagaatt ggtgctgtat cctgtgagct
     4441 tgcaatccat ttaccaaagc tgttgattcc tgtttgaaca actggccaaa agatagctaa
     4501 tcctagcgct acaagaactg agcgatagat aaccacaaat ggtacgaagc gtttaccgtt
     4561 aaagaaggtc aaaacatcag gtaatttgcg gtaattgtag tatttgttat aggttgttgc
     4621 ccctacaaaa ccagcgatga taccaacgaa gacccccatg ttcaaagcag gttgacccaa
     4681 gatattgacg aagtagcctg aaactggaat ctctgttcca aaaacagtgg ttacggttgc
     4741 cgctgcatct gcaagcatgt cagtcgtcac accaaagaag tgacctgtaa tcaagttaat
     4801 aaggataaaa gcaagacctg ctgagaaggc accaccagcc ttttccttag cccagctacc
     4861 accgatagcc aaggcaaaga gcaagtgaag gtttccgata atcccccaac cgatttgggc
     4921 gataatattc ccgatacgaa tcaagagttc tgattctggg ctgattaacg gaatagagtt
     4981 tccgatagaa accatcagac ctgctgcagg cataactgca atcacgacca ttaaacactt
     5041 accgaatttt tgccaaaatt cgaaactaag aaattttttc attttttctc ctttattttt
     5101 tggctctgtg ccattttata cattaatttc aacttccaca ccaaaatggt ctgaaataat
     5161 cggacgattc tctccattga aaatcactaa gctggataaa acttcctttt tctgatttaa
     5221 gaaaatgtaa tccaatcgtt tttcctgact gtgaccagcc cagccatcga tagccttttc
     5281 aaccgtaatc ccctggtctt tttccatcgc tagattgtat gaatcataaa gcccgagctc
     5341 tgtaatcgct tcgtaggcct ctcgatctga gaaggcatcg gtattaaaat ctcccatgag
     5401 aatcttaaaa cgtctattgc cagtccgttc cacaatcgta cgaatgttat caagctggtc
     5461 ttcctcttca ctccctggaa gattgatgtg acaagaatac aggtcgatca actggtcttg
     5521 atagaagacc gtcaagccca taatttttcg tgataggatg gaatcaacag atttattctg
     5581 actacaataa aatggatcca cttcataaac tggcaacttg gtaagaaagg caatcccttc
     5641 ttcgtactta tcgtagccga tatgtgagtt gctccaataa tatgaatagt caaattgtcc
     5701 caaggctctt aatttttcta ataaaatcaa gccataatta tccgccttca agtctttcgt
     5761 taccaaatca gcagttatga gctgattgac ctcttgaaga gcgatgacat cataagcctt
     5821 ttcagctatt gtttgggcta aaacatctag tttttcatcc tgcctttctt ctaaccaggc
     5881 atggacatta attgttagta atttcattgc tccccctctc tctgaaaatg cgtaaccgtt
     5941 ttcttttata gaaatagtat aacgtaaacg tttgcattag tcaatagctt ttccgtaata
     6001 ttttaaactt ttacgtaaaa gttgtgtatt ctactaaata aaatagatgt attacccctt
     6061 tctggctctt ttatgataca ctaatgggta gaaagacagg aaactatgag taagtataaa
     6121 aaagtttatc aagatattaa gaaaaaaatc gaagagcagg tttggtcaac tggacaggcc
     6181 ctaccgacag aaaatgaatt aatggaagtg tactcctact ccaaggacac cattcgcaaa
     6241 gcactatctc ttcttgaaat ggatggttat attcaaaaaa aacaggggaa atcttctatt
     6301 gttatcgaac atggtctaat gaaggaccaa tatctttctg aaattaaaac agcgggcgaa
     6361 ttgaacaaaa gatcacagca ccaaattcat acccagctta cttcgcttta tattattcaa
     6421 ggccaagaag atttaatgtc aactttcgaa gttgatgata aggtagattt ctatcgagtg
     6481 agtcgggtac ggacaattga cggtgagcgg ttggaatatg acatttccta tttcgaccgt
     6541 cgggtcgttc catatctcag caaagaaatt gccgaaagct ctatttaccg ctacttagaa
     6601 gaagaactcc atttaacaat ttctcattcc agacgtgaaa tctccttccg ttttgcaaac
     6661 gaagaagaaa aacaattgat ggacttagga gactatgaca tggtcgtcgt ggtcactagc
     6721 atcacctatc tttcaaatgg tcaagctttc cagtatggaa caattagtta ccgtccagac
     6781 aaagttagct ttgtatcaat ggcgaaacgg taaaaggaaa ctttcgattt tttgaccaag
     6841 tgtacaaaac ttctagaatt ctatagttat aaaaagaatg tctccgcttt tttgcagaga
     6901 cattctttgc atttatatac taaggagagc accaataatg gtaaaaactg gtcggttttt
     6961 attcttcaac acataggaag aattgatctg ataagttttg gagtggttca atcaactttc
     7021 ctactaattg ttggaattca attacttact gtgccagatg tcttgattgt actgttcaat
     7081 ggtacggtct gatgagaaga atccagcttt ggcaatgtta tgaacaactt tcttgttcca
     7141 tgaatcttga tcttcgtaat ctgcaaagac ttgttctttt acttcgatgt attcagccaa
     7201 gtcaatcaag gtcatgaacc agtctttcga aatcaattca tggtgcagac ggccaagacg
     7261 ttcttcgtta ccaagtgctt ttacctcagc gctaacgata aagtcaactg cacgtttgat
     7321 attggcatcg ccattgtagt agtcagcaga tacatatcca gccttatcgt acaagtcgat
     7381 gatggtatct gaatctttac caaatgtata gatgttatcc ataccagcca actcagcaat
     7441 ctcaacgttg gcaccgtcca tggtaccaag tgtcaatgca ccgttcaaca tgaatttcat
     7501 gttaccagta cctgacgctt ctttagaagc caatgagatt tgttctgaaa tatctgttgc
     7561 agggatgagt ttctcagcaa ctgtcacatt gtagttttct accaagtgaa cattgaggta
     7621 tttatttact tctggatcat tattgatcaa ctctgacaag caaagaatca agtgaatgat
     7681 gtcttgtgca atgatgtagg caggtgccgc tttaccaccg aagataacag tgattttacg
     7741 tttcggaagg ttaccattct tgatttcaag gtatttgtgg ataacataca aggcattcat
     7801 ttgttggcgt ttgtactcgt ggaaacgttt gatttgtgta tcaataatag aattttcatc
     7861 cagttcgata cctttgttgt ctttaaggta acgtttgaga gccaacttat tgttgaactt
     7921 gatttcagcc aacttagcat gaacttcctt gtcatcagca aaggcaagca atttttcaag
     7981 tttagtagca tctgtcaagt attcatcgcc aatcaattct ttgatatagt cagcgaggtc
     8041 ttggttggca aattccaacc aacggcggaa agtgataccg tttgttttat tgttgaattt
     8101 ttctgggtaa agctcgtaga aagctttcaa ttcagagttt ttgaggattt ctgtgtgaag
     8161 cgcagctaca ccgttcactg agttagagaa gtggatatcc atgtgagcca tgtgtacacg
     8221 acctgattca tcaatgattt ggactgctgg gtctttgatt tctgcacgaa taagggcatc
     8281 caattctttg atgatatcaa ccaagtgtgg caccacttct tcaaggaact caagtggcca
     8341 tttttcaagt gcttccgcca agatagtgtg gtttgtgtaa ccagtcatat tcttaacgat
     8401 ggcaactgct tccgcaaatt caataccatg tttgtcagtc aaaagacgga tcaactcagg
     8461 aatcaccatt gatgggtgag tatcgttgat ttgcacataa gcgtagtcag ccaagtcatg
     8521 caagtttgaa ccgcgctcaa ttgcttcatc aatcaaaagt tgagcagcat ttgataccat
     8581 gaagtattgt tggtagatac ggagcaattc accattctta tcagaatcat ctgggtacaa
     8641 gaagagtgtc aagttttctt taatatcagt cttatcaaat gaaataccgt ctgtaatcaa
     8701 gtcatagttt actgactcaa tatcaaacaa attgaggtag ttcttagtct cttttttata
     8761 gccaagaata tcaagacgat ccaattttga tttcaaagtg aaatttttga atggaacatc
     8821 atagctgata gttgttggaa tcaaccaaga atcattttca atccagaagt ttggctctgc
     8881 ttcttgctca tttttcttaa atacttggcg gaaaagacca cagtggtagt tcagaccaac
     8941 accttcaccg ttgatagcaa gtgttgacat agaatcaacg aaacatgaag ccagacgtcc
     9001 caaaccaccg ttaccaagtg atggttctgg ttcaatgtct tcaacttgag ccaatgattt
     9061 accagctgct gccaattctg cttgaatgtc tttgtacacg cccaagttaa tcaagttgtt
     9121 tgacaagagt ttaccgataa ggaactcagc tgagatatag taaactttac gttttcctgt
     9181 gttttttggt tttgtagctg cagcttcttt tacgtagttt aacaattgaa gatagatttc
     9241 ttcgtttgtt aaatcagcta atttcttcga agtatttgtt tctgcaaatg ttgtaaattt
     9301 agtcatggtt ttcatttcct cgttggtata gtaatgtcat ttttgtcaag aagtctttgc
     9361 gttcttgggt caagtcttca gctttcatgc gccattccca gtttccaccg atagttgacg
     9421 gcatattcat tcgactttct tcacccaagt ctaggacgtc ttgcatggtt gcaatagctg
     9481 tatcactcac tgttgcaaac agcatacgga gcatagcttg gctaactttt tcaatcggct
     9541 tacggttgct gtaggcgtcc acgtattctt gttgttctgg atcaagattg ttgtaccagc
     9601 cattgacaac ctcattatcg tgagttccag tgtaggcaac tgaatttgga atgcaacggt
     9661 gtggagcatc gatactctta cctgttacat caaagaaacc aaattctaag attttcatgc
     9721 ctggatagcc acaatctgca agcaatttgc gagctttagc gtcaatgttt ccaaggtctt
     9781 ctgcaatgat tggaaggtct ccaagtgttt ctttgacagc cttgaagaga ttgtagccag
     9841 gacctggttc ccaggtacca accttagcta cttctgcctt accatcaact tgccagaagt
     9901 ctgagaaacc tttgaaatgg tcaatccgaa ggacatcata aagtttgaaa ctttcatgga
     9961 tacgataaat ccaccagtta tagcctgttt tttcatgttc tggccaatcg taaataggat
    10021 ttccccataa ttgaccatcc gctgagaagt tatcagcagg tacacctgct acataaagtg
    10081 gcttgcgttc actgtccaat ttgaatagtt ggggttttgt ccacacttca acgctatcag
    10141 cagaaacata gattggcatg tctccgatga ttttaatgtg gtgtttgttg gcatattctt
    10201 tcaattgttt ccattggctg aagaagaaat actgggtgac tttgtagtag tcgatttgat
    10261 ttgccaattc taagcggtac ttatcaagtg cttcctcgtt gcgagctaca acttttttat
    10321 catcccattc ttggagagct ttattaccaa agtattcctt gatagccatg aactccgcat
    10381 aatctgtcaa ccaggatgag ttagcctttt caaactctag aaaagcagct ttcttcttat
    10441 catcttgtaa aaatgcttga actgccttct ccaaaattgg tcggcgaact tgatagataa
    10501 gagcatagtc tactttttca ggattatctc caaaatttac atcttggaaa tcttctgttg
    10561 ccaataagcc atcttcaacc aagaggtcaa agtctatcaa gtgtgtattt cctgcaatag
    10621 cagagaaaga ctggtaagga gaatctccat agcttgtagt tgttagtggt aaaatctgcc
    10681 agtaggtttg cttggtttcc accaagaaat ctacaaaatc ataggcagac tgtccaaaag
    10741 taccaatacc aaacttacct ggaagtgagg taatatgcat caaaattcca ctggtacgat
    10801 ttgtcataaa aacgttttcc tttctgtcgg ttacgaatat agtttaacgc aaacgtttgc
    10861 acttgtcaag gattttataa aaaaagtttt aatatgctct agaaagccta ttttatagca
    10921 tttgttagcg aataacaaaa aagaaaaaat cagatatttc tatccgattt ttcgaattct
    10981 tcactatttt taagcaaagc tttgctcttt tatttggatg cttccatcaa ccacatccgc
    11041 ttccagatat ttgacatcaa catgatccaa atagtaatct gttactttgt ctcgaatctg
    11101 attttcaatg acacggcgca gaggacgagc tcccattgcc tggtcatagc cttcttccat
    11161 caaaaattct ttcgctgctt ccgttaccgt taattggatg cctttcttcg ccagggtctt
    11221 attgacctgg gttaacatca aatctacgat agccttgagg tcttctttgc ccaagtgttt
    11281 gaattcgata actgcgttga aacggttgag gaattctgga cggaagaatg gtgcgatgcg
    11341 gtccatgatg tcttgatttt cttcagcttc tggcattcca taaccaaaac cagcattaga
    11401 agtcgcgata ataatggtat ttttaaagtt aacttggttg ccctgtccat cagtcaaatg
    11461 cccatcatct agcacttgca aaaggagggt aatcacttgt gggtctgctt tttcaatttc
    11521 atccaagagg acaatggagt aaggattgcg gcggacacgc tcggtaagag tatgggaatt
    11581 gtcatcatat ccaacgtaac cagctgtggt accgattaat ttggaaacag ctgtccgatc
    11641 gctgtattcc gacatatcca aacgaataat ggcatccttg ttaccaaaca agtcaagcgc
    11701 taactgtttt gccaactctg tcttacccac acctgtcgga ccgacaaaga ggaaggaacc
    11761 aatcggacga ttgccgtcat caaaacctgc acgattccga cgaatagccc gagatacagc
    11821 ttccaccgca tcgtcttgac cgataacatt agctgccaga cgatttttca attccttgag
    11881 tcgttcaatg tcagaagctc ccatttgaga aactggaatt cctgtcattc gctcaactgc
    11941 ctgagccaca tcattgacgg tcgccaccac tttctgttgc tccgtatgat tatcaatctg
    12001 tttttggagc ttatcaatac ggaccttttc attcaaggct ttttcataat cctctttctc
    12061 agccgcttcc aactgcaact gttttgcctc agccatttct gcttctaagg tctgaatatc
    12121 tgtcacagga tgttgtgcag ctaagtgagc agcggtcaca tcgaccaggt caatggcctt
    12181 atcaggcaag ctacgttgtg gaatatattg gacggaataa tcaaccgcag ctctcaagac
    12241 ctcatctggc aattcaatat tgtggtgggc ttcataaagc ggcttgatac ctttcaaaat
    12301 ctggtaggta tcttctgcgg acggagcatt gaccttgact tcgttgaaac gacgagccag
    12361 agcagcattc ttgtgaatag tattgcggta ttcgtcctgt gtagtcgcac caataacggt
    12421 caactcccca cgggaaagag ctggtttgag aatatctgct aagcccttgg aacctgagtc
    12481 tccaccagtg ctgccagctc ccaaaatctg atgaatttca tcaaagaaga gaatgatatt
    12541 tccagctttt ttgacttcat ccacaagatt ttggacattt tcttcaaaag ctccacggta
    12601 ctgagtccca gcttccaagc ctgaaatgtc gatggagatg atttccttat tcttaatggc
    12661 tgctggcaca tcaccattga caatggcctg agccaaacct tctactaccg cagttttacc
    12721 tacacccgca tcaccgacca aaacaggatt gttcttggta cggcgagcca gaatttcaga
    12781 tgtttcttga atttccttgt ttcgtccaat gactggatcc aacttccctt cacgcgcatc
    12841 ttgtgtcaaa ttgcgaccaa gttttgccag aattccgtct gactttatct gacctttaac
    12901 ctgtgtttga gcctcttctt ctgtctgtgg caggcgacct gtctgacggt aaatggcaaa
    12961 ttcctccggt gtcacttcac gcccattgat agaataacgg cgacgttctg tactatagcc
    13021 acccatattg cccatgagtt gattgaaaat atcgtccata ttgttaaagt tattgaaatt
    13081 gttgttcata gtttttacct cgtttataaa ttctattgtt tttgactttt actgactttt
    13141 gttttaaaaa aataatagct agtatggaat aatcctgtct ttcatataac ctccttagaa
    13201 gtttgtcttt tactgatcat ttagtcaatt agtcagtcaa actttttagt ttgacctaaa
    13261 ctgacctttt gttcaaagaa ttcgtaaggt cctttacctt acgaatctta ttctacacca
    13321 ttggtcagta aaagtcaaca gttttgtttg accttttttg actttttgat atagtctttt
    13381 agtttacttt tagtactagg caacgagccg cagacataac tggagttagg caaggtgagt
    13441 taacgacgta ataaaagata aactaaacga cgataaaaaa atctacctga cggtagattc
    13501 ggtagctact agatgataat cccttccaaa tgatccagtt catgctggac aatctgggct
    13561 tggaaatctg tcagctttag gctctgcttt ttccatgaag catcaaaaaa ctccacttca
    13621 atctcctgat agcgtgtcgt cgggcgggta ccttccagcg acagacagcc ttcctctgtc
    13681 tgatagggct tggccttgct gatgaggacg ggattataca tgatcaggtt ggtgaagccc
    13741 atgttgacga tgataatccg ctttttgacg ccaatcatgt tggccgccat gcccacacaa
    13801 gcgtgagcat tggctgctaa agtgtcctgc aaatcctgac cgacctgcac atctagctga
    13861 gtcgcaggct cagacttctg ctgcaggaag aaaatgtctt tcataatggg ttgaatcatg
    13921 gggtgtctcc ttcgtttgtt tgggaagcga aataagcttg ccagtctttt aagtatctta
    13981 ctctaactgc gttaccatca ttgaaatgat tgtcctgata actctctaac tcattcgcag
    14041 taaataggct acctagttgc ttaccattaa tttttatagt cggttttaga tgggtaataa
    14101 atagtctttt tctcttttct acctcttcta tatctctttt aaaaatataa ttttgtttta
    14161 aattatcatc ctgtaaatca tagtagattt ccaccaatag cttttctac
//
LOCUS       DBNFCX010000058        13923 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.058, whole genome shotgun sequence.
ACCESSION   DBNFCX010000058 DBNFCX010000000
VERSION     DBNFCX010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 13923)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13923)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13923
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.058"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            134..2176
                     /locus_tag="AC1PJC_001503"
     CDS             134..2176
                     /locus_tag="AC1PJC_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HIP6620487.1"
                     /translation="MVDNRTMAILMELFATRKESLYELSIQTGIEKEQLHSNLELVNQ
                     LLQEHSFPQIQYKDSEFVISTELYNQKESVFSLFRNRQIYLSQEERQLLIYLYTFIRK
                     EFVSNVHYQELLSVSRNTTLTDIKNVKELCLDFQVRLEYTRAKGYHLIGREEDKHRLA
                     LYALSNCLQSSIGVWALDYILKSWGEENPIEELKIVSQQACNYYKVSALEERLDEYLY
                     FLIFLFIRQARVGNLINWNFEGKVGFVKDFLQRLWKLLRLKSTSTLELNVATQEYLSH
                     LLQGCLEGESGEKDDLFYHLTVEIVEEMERLSLIAFEHRSEMIEGLQRHLIPAYYRLT
                     SRLVNVNSYTETIKEEHADLFYLVKKALRPLEEHLGFTIPDSEVSYFVIHFGGYIEAG
                     QQRSYRYRALVVCPNGVSSSLIVKENLRQLFPNIYFADTHSLQDWKMLDMTDYDMVFG
                     TIKLNIELPFFLVSQLMTSNHKKELFHLVNQHFPNAAYFPIEIEQLLSLVGKHATIHQ
                     EQALKYELVQFLNQRSHEQRGRSPMLEELITKETFQWSEEVLDWQKAVALAARPLVDK
                     GAIETRYIDAMITKVEEFGPFIDLGKGIAIPHARPEDGVNEVGMSMLVLDKPVYLLDD
                     PSHEIRLFICIAAVDNQTHLRALSHLTKILREEENIRQLVGAKEFADVQHLLKEEQ"
     gene            2178..2462
                     /locus_tag="AC1PJC_001504"
     CDS             2178..2462
                     /locus_tag="AC1PJC_001504"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016397350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HIP6620488.1"
                     /translation="MLRIGTACGSGLGSSFMVQMNIESILRDLGVSDVHVEHYDLGGA
                     NPSEADVWIVGRDLADSATHLGDVRILNSIIDMNELRELVTAICQEKGLV"
     gene            2516..3862
                     /locus_tag="AC1PJC_001505"
     CDS             2516..3862
                     /locus_tag="AC1PJC_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
                     /protein_id="HIP6620489.1"
                     /translation="MILDFLIDIAKTPAILVALIAILGLALQKKPAADLVKGGLKTFV
                     GFIVVGGGANIIVGSLEPFGQMFEQAFNLKGVVPNNEAIVAMALDKYGTATSLIMLLG
                     MVFNIAIARFTRFKYIFLTGHHTLYMACMIAVIMSVAGFTSVGLIVMGGLALGLIMTL
                     SPAFVQKYMIQLTGNDHVALGHFSALGYWLSGVVGGLVGDKSKSTEDINFPKGLAFLR
                     DSTVSIAISMSLIYMIVALFAGGDYIKENLSGGTNSMIYALTLGGTFAAGVFVILSGV
                     RLILAEIVPAFKGISEKLVPNSKPALDCPVVYPYAPNAVLIGFISSFAGGIVSMIILA
                     LTGGVVILPGVVPHFFCGATAGVMGNASGGVRGAVCGAFMQGVLISFLPVFLLPVLGD
                     LGFAGSTFSDADFGLSGIFLGVLAKNGGILTVSVGIFAVLALMLGLSLVKKEQKEG"
     gene            3864..4712
                     /locus_tag="AC1PJC_001506"
     CDS             3864..4712
                     /locus_tag="AC1PJC_001506"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HIP6620490.1"
                     /translation="MTSSTTDLKRFAKEIRYHTLATLNQLGFGHYGGSLSIVEVLAAL
                     YGEILDIRVQNFSSKERDHFILSKGHAGPALYSTLYLKGFFDRDFLLSLNQNGTHLPS
                     HPDRNLTPGVDMTTGSLGQGMSVATGVAYGKKIEQSPYYTYTLVGDGELNEGQCWEAA
                     QFAAHHELSKLILFVDDNKKQLDGRTHDICQTFDFVKKFQAFGWESMRVNGADIDAII
                     NAILTMKSSKSPQPKCIVLDTTKGQGVAFLEELESNHHLRLSGQLREDLEQVTLVLAR
                     ELEVTE"
     gene            4709..5635
                     /locus_tag="AC1PJC_001507"
     CDS             4709..5635
                     /locus_tag="AC1PJC_001507"
                     /EC_number="2.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase family protein"
                     /protein_id="HIP6620491.1"
                     /translation="MRQTKEMRLVYSDFLAQVGQEDTTIAAIEADLSSSMATNKLSSV
                     LGGRYVNVGIMEQEMVGVAAGLSLLGYKPYIHTFGPFASRRVYDQVFISLAYAQLNAT
                     IIGSDAGVSAEMNGGTHMPFEELGLMRLIPKARVYEVSDDVQFQAVLKETIKVDGLKY
                     IRTIRKAPTAIYQGGEDFSKGYCVLRQGEDMTLLASGIMVEQALKAADQLEAQGVSVQ
                     VIDLFRIKPIHEDIPALLSGRPVLTVENHNRIGGLGSSICELMATDLTTPVHRIGIEE
                     SFGQVGQQAYLMDVYGLTAEHIVKQAQLMLQQ"
     gene            5826..7592
                     /locus_tag="AC1PJC_001508"
     CDS             5826..7592
                     /locus_tag="AC1PJC_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HIP6620492.1"
                     /translation="MKKIQREFQKIYYNLDKILLLFFTLFTFMEFVWIPLNSWISEGL
                     LAMTGHAYLSPTNLLSVFAENLLVTGLFILLFFVNIAIAYLELALLFTGVWQLLDEKV
                     KHLPDYLRDVRDSMVAIIRHSSLPKVLFLLFYSVILLPFLRRVLNIYYFNKIVVPQFI
                     VDYLSNTVWLGILILFFLLLFFWLASRFMYALPNIYFEHRSVKESIAYSWKKTKGRKQ
                     VSSFFRLIWLVTFPVLLFTGIGILLYLVQLVAEPYLPDTGPSYWLAVVCYAILKLAYY
                     GVVALFMMGFVSLLTGKQLPNYRRKRLRHRLRLAILLVSGLVFGTQGALALYYPFDTL
                     PVTISHRGVDNGNAVQNSIEALEKTSQLKPDYIEMDVQETKDGQFIVMHDTDLLALTG
                     NPGGTHDYTLAELTGMTASENGMAAPVPSFDEYLEKADELGQKLLVEIKVTKADSPKL
                     TQNFLKKYGQRLIAKGHQMQSLDYRTIIEIKQYSEKLVSFFILPFNSIYPTTVADGYT
                     MEYTSLDQNFMVKSWIRGKSVYAWTPNEEESMTKMLLLQVDGIITDNMTDLQSLMEEM
                     KENRRYPDLFFLQFQSLIYNFE"
     gene            complement(7630..7929)
                     /locus_tag="AC1PJC_001509"
     CDS             complement(7630..7929)
                     /locus_tag="AC1PJC_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008808250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HIP6620493.1"
                     /translation="MMNMQNMMRQAQKLQKQMEKSQAELAATQFTGSSVQDLVTATFT
                     GDKKLVSIDFKADVVDADDLETLQEMTIQAVNAALTKVDEATQKKLGAFAGKLPF"
     gene            8205..9371
                     /locus_tag="AC1PJC_001510"
     CDS             8205..9371
                     /locus_tag="AC1PJC_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018166318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HIP6620494.1"
                     /translation="MFRLAKEELEKLGAIITATEIYQQPGLWKEAYQLYLDQLEKIEG
                     FLKSIKEKHDFVHVVFTGAGTSDFVGQSIANYLNQVNDLKHIRFSAIGTVELVSRPHD
                     YLQADVPTILVSFARSGNSPESVAAVEVAKQLVDQLYQVTITCAPEGKLALAAEGDSD
                     NLLLLQPAGSNDKGFAMTGSYSCMALTALLVFSPASQEEKAAWVEIIARLGQDVLDRE
                     DYVQDLINLDFERVIYLGSGGFYGLAHEAQLKILELTAGKIATMYESPLGFRHGPKSF
                     IDEKTLIFLFASNDAYTRQYDVDLLNEVHGDGIAERIVALSADKLADTEAANFVLAEG
                     GADLPDVFLTFPYIIFAQTVSIMAAIKCNNLPDTPSPTGTVNRVVQGVIIHPLP"
     gene            complement(9412..11679)
                     /locus_tag="AC1PJC_001511"
     CDS             complement(9412..11679)
                     /locus_tag="AC1PJC_001511"
                     /EC_number="3.4.14.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro dipeptidyl-peptidase"
                     /protein_id="HIP6620495.1"
                     /translation="MRFNQFSFIKKETSVYLQELDALGFQLIPNASSKTNLETFVRKC
                     HFLTANTDFALSNMIAEWDTDLLTFFQSDRELTDLIFYQVAFQLLGFVPGVDYTDVMD
                     FVEKSNFPVIYGDMIDNLYQLLATRTKSGNTLIDQLVSDDLIPEDNHYHFFNGKSLAT
                     FSTKNLIREVVYVETPVDTAGTGQTDIVKLSILRPQFDGKIPAVITNSPYHQGVNDVA
                     SDKALHKMEGELAEKPAGTIEVKQTSITKLDLDKRDLPVSPATEKLGHITSYSLNDYF
                     LARGFASLHVSGVGTLGSTGYMTSGDYQQVEGYKAVIDWLNGRTKAYTDHTRSLEVKA
                     DWANGKVATTGLSYLGTMSNALATTGVDGLEVIIAEAGISSWYDYYRENGLVTSPGGY
                     PGEDLDSLTALTYSKSLQAGDFLRNKAAYEKGLAAERAALDRTSGDYNQYWHDRNYLL
                     QADKVKCEVVFTHGSQDWNVKPIHVWNMFHALPSQIKKHLFFHNGAHVYMNNWQSIDF
                     RESMNALLSQKLLGYENNYQLPTVIWQDNCGEQTWTTLDTFGGGQEAVLPLGTGSQTI
                     SNQYPQEDFDRYGKSYPAFHQDLYAGKGNQVSIDLPVTEDLLLNGQVTLKLRVASSVA
                     KGLLSAQLLDKGNKKRLAPIPTPKTRLSLDNGRYHAQENLVELPYVDMPQRLVTKGFM
                     NLQNRTDLMTVEEVVPDQWMELSWKLQPTIYQLKKGDVLELILYTTDFECTVRDNSDW
                     TISIDLEQSILHLPY"
     gene            11861..12595
                     /locus_tag="AC1PJC_001512"
     CDS             11861..12595
                     /locus_tag="AC1PJC_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CppA N-terminal domain-containing protein"
                     /protein_id="HIP6620496.1"
                     /translation="MLRKNETIVPVLRINNRAINQGFLEKNLGMKTKLEDGPFADFGD
                     KTSPETKLVLTESPGNRTRAVEGLKKLNKIVIKVDNASEIEALLAQGSQYSKLYQGKN
                     GYGFEAVSPEGDTFLLHAEASVDDLKAILPPVPFKVQDDVSGLTAFTVESIWINTPQA
                     SISQDYYEAILPQQAFLHFVGAEGKDLLIPAEQVWDLEGLRFPVEQDFDWAHLESQLE
                     GPFFKDKKASFIQTVDPSGIELWFEK"
     gene            12592..13533
                     /locus_tag="AC1PJC_001513"
     CDS             12592..13533
                     /locus_tag="AC1PJC_001513"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HIP6620497.1"
                     /translation="MRQAILDKISEQIGQGVYPGASLALFSKDQWQEYYLGTQDGQLP
                     VEAGLTYDLASVSKVVGVGTLATFLVNSGALELDRTLQSYYPAFADSQVTIRQLLTHT
                     SGIDPFIPNRDSLDADQFKEAILKITVTDKKDFLYTDINFLLLGFLLEEIGGDSLDQL
                     IRREVLEPFGMSQTSFGPVSQAVPTVRGVKAGLVHDPKARVLGVHAGSAGLFSTVKDL
                     EIFLERYLTADFATNLTQDYGFDDKRKRSLAWDKKGDWLSHTGYTGTFIMYNRPLQKA
                     AIFLSNRTFDKDERAQWKLDRNQVMALIRQVLEEEEQ"
     gene            13530..13733
                     /locus_tag="AC1PJC_001514"
                     /pseudo
     CDS             13530..13733
                     /locus_tag="AC1PJC_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019774923.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1697 domain-containing protein"
     gene            13696..>13923
                     /locus_tag="AC1PJC_001515"
     CDS             13696..>13923
                     /locus_tag="AC1PJC_001515"
                     /inference="COORDINATES: protein motif:HMM:NF017102.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004040 - amidase activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HIP6620498.1"
                     /translation="MLNFKLFSQKVAPWAGDWWGDAASWGANAARDGFRTGTTPEVGA
                     IISWNDGALGHVAYVTAVNEDGQIQVLEANYR"
BASE COUNT         3795 a         2709 c         3270 g         4149 t
ORIGIN      
        1 attggtggga accaatcttt tttagtttaa gtagtgagca caattgaatt tttatttttc
       61 attatattaa ttgggctcaa agactctaga aatcagaaat gaaaagggat acaattaaga
      121 caaggaggaa aatatggttg ataatcgtac catggcgatt ctgatggaat tgtttgcgac
      181 tcgaaaagaa agtttgtacg aacttagtat tcaaacagga attgaaaagg agcagctaca
      241 ttctaatttg gaactagtca atcaattgtt acaagaacat tccttcccgc agatacaata
      301 caaagatagc gagtttgtta tttctacgga gctttacaat caaaaagaaa gtgtattttc
      361 gctctttcgc aatcgccaga tctatctttc gcaagaagaa agacagcttc ttatctatct
      421 ttataccttt atccgaaaag aatttgtatc aaacgttcac taccaagaat tattgagtgt
      481 gagccgtaac acaacattga cggatattaa gaatgtaaag gaactttgct tggactttca
      541 agtacgcttg gaatatacga gggcgaaagg ctatcatcta attggtcgag aagaagataa
      601 acatcgcttg gcgctttatg cactcagtaa ttgtttgcag tcttcgattg gtgtatgggc
      661 tttggattat attcttaaat cttggggtga ggaaaatcct attgaagaat tgaaaatagt
      721 gagtcaacaa gcttgcaatt attataaagt ctcagcttta gaagagagat tggatgaata
      781 tttgtatttt ttgatatttc tatttatccg tcaggcgcgt gttggcaacc ttattaactg
      841 gaattttgaa ggaaaggtag ggtttgtaaa agattttctg caacgccttt ggaaattatt
      901 acgtttaaaa agtactagca cattagaatt aaatgttgcg acacaagaat atctgtcaca
      961 tttactgcaa ggatgcttag aaggtgagag cggagaaaag gatgatctat tttaccactt
     1021 gactgtagaa atagtggaag agatggaacg tttgtcctta attgcttttg aacatcgctc
     1081 ggaaatgatt gaaggtttgc aacgtcacct aattcctgct tactaccgtt taacatctcg
     1141 tttggtaaat gtcaattcat atactgaaac catcaaagaa gagcatgccg acttgttcta
     1201 tcttgtaaaa aaagctttgc gacctttgga agagcatcta ggttttacta taccagatag
     1261 tgaggtatct tattttgtca tccactttgg tggctacatc gaagcaggtc aacaacgttc
     1321 atatcgttat cgggccttgg ttgtttgccc aaatggagtg agctcttcgc tgattgtaaa
     1381 agaaaatcta cggcaactat ttcctaatat ctattttgcc gatacccatt ccttacagga
     1441 ttggaagatg ctagacatga cagactatga catggtattt ggaactatca agctgaatat
     1501 agagctacca tttttcttgg tatcccagct gatgacctct aatcataaaa aagaattatt
     1561 tcatttggtt aatcagcatt tcccaaatgc ggcttatttt ccgattgaga ttgagcagtt
     1621 attatcactt gttgggaaac atgcaaccat tcatcaggag caggctttaa aatatgaatt
     1681 ggtgcagttt ctcaatcagc gctcccatga gcaaagggga aggagtccta tgttagaaga
     1741 attgattaca aaagagacct ttcaatggtc tgaggaagtt ttagactggc aaaaagcagt
     1801 tgccctggct gcacgacctc tggtagataa aggagctata gaaactcgat atattgatgc
     1861 tatgataacg aaggtagaag agtttggtcc atttattgac ctaggtaaag gaattgcgat
     1921 tccacatgca cgaccagaag atggggttaa tgaggtaggg atgtcaatgt tggtattgga
     1981 taagccagtt tatctattgg atgaccctag tcatgaaatt cggctgttca tttgtattgc
     2041 agccgtggat aatcaaaccc atctcagagc actctcgcat ttgacaaaaa ttttgcgaga
     2101 agaagaaaat attcgacaac ttgtcggcgc caaagaattc gccgacgtac aacatttatt
     2161 aaaggaggaa cagtaatatg ttacgaattg gaacagcctg tggttcaggt ttaggctcta
     2221 gctttatggt tcaaatgaat attgaatcca ttttgcgaga tttaggtgta tcagatgttc
     2281 atgtggagca ttatgatcta ggtggtgcca atccgagtga agcagatgtg tggattgtcg
     2341 gacgtgacct ggctgattct gcaactcatt taggagatgt tcgaatattg aatagtatta
     2401 ttgatatgaa tgagttgagg gaacttgtca cggctatctg tcaagaaaaa ggtttggttt
     2461 aaatcgtata cacaggggat gacccgcaaa gataaaatta taaaggagac agaaaatgat
     2521 attggatttt ctcattgata ttgctaagac tccggcaatt ctggttgctc tcattgctat
     2581 tctaggttta gccttacaga aaaagcccgc agcagattta gttaaggggg gattgaaaac
     2641 ttttgttggt tttattgttg ttggtggcgg agcgaatatt attgttggct cgcttgagcc
     2701 atttggtcaa atgtttgaac aagctttcaa cttgaaaggg gttgttccaa ataatgaagc
     2761 tattgtagcg atggctttgg ataagtatgg aactgctaca tccttgatta tgttgcttgg
     2821 aatggtcttc aatattgcta ttgctcgctt tacacgcttt aaatatattt tcttgacagg
     2881 acaccacaca ctatatatgg cctgtatgat tgcagttatc atgagtgttg caggattcac
     2941 ttctgtcggc ctaattgtga tgggtgggtt ggctttaggt ctgattatga cactctcccc
     3001 agccttcgtt caaaaataca tgattcaatt gacaggaaat gatcatgtcg ccctaggtca
     3061 cttcagtgca cttggttact ggttgagtgg tgtagtaggc ggtttggtcg gtgacaagtc
     3121 taagtctact gaggatatta atttccctaa aggtttggca ttcttgcgtg attcaactgt
     3181 cagcattgcc atttctatgt ccttgattta catgattgtg gctttgtttg caggcggtga
     3241 ttatattaag gaaaacctta gtggtggtac taacagtatg atttacgcct tgaccctagg
     3301 tggaactttt gcagcaggtg tttttgttat cttatccggt gtacgcttaa ttttggcgga
     3361 aattgttcca gccttcaaag gaatttcaga gaagttggtt ccgaattcca aaccagccct
     3421 agactgtcca gttgtttatc cttatgcacc aaacgccgtg ttgattggct ttatctctag
     3481 ttttgcaggt ggtattgtca gcatgattat tcttgccttg actggcggtg tcgttatcct
     3541 tccaggtgtc gtaccacact tcttctgtgg agcaactgca ggggtcatgg gaaatgcgtc
     3601 aggtggtgtt cgtggcgcag tttgtggtgc ttttatgcaa ggggttctca ttagtttctt
     3661 acctgtattc ttacttcctg ttttgggaga ccttggtttt gctggttcaa ctttctcgga
     3721 tgcagacttt ggtctttctg gtattttcct gggagtgcta gccaagaatg gcggtatcct
     3781 cacagtttcg gttggtatct ttgctgtctt ggctttgatg cttggattgt cattggtgaa
     3841 gaaagaacag aaagaaggct aatatgacta gcagcacaac ggatttgaaa cgatttgcca
     3901 aagaaattcg ctaccatacc ttggcgactt tgaatcaatt aggatttggt cattatggtg
     3961 gtagcttatc aatcgtagaa gtgttggctg ctctatatgg agaaattctg gacattcgtg
     4021 tccagaattt ctcttctaag gagcgggatc actttattct gtccaaggga catgcaggtc
     4081 cagcacttta tagtacgttg tatttgaaag gcttctttga tagagatttt ctcttgtcgc
     4141 taaatcaaaa tggaacacat ttgccttcac accctgaccg aaacttaacg ccaggggtgg
     4201 atatgacaac gggttcgttg gggcaaggga tgagtgtcgc gacaggtgtt gcttatggta
     4261 agaagataga acagtcccca tactatacct acacattggt aggggacggg gaattgaatg
     4321 aaggtcaatg ctgggaagca gctcagtttg ctgcccacca cgaactatcg aaactgattc
     4381 tgtttgtgga tgacaataaa aaacaactag acggtcgtac ccatgatatt tgccaaacct
     4441 ttgattttgt taaaaaattt caggcttttg gttgggaatc aatgcgtgtg aatggagccg
     4501 atatagatgc tattataaat gctattctaa caatgaagtc aagtaagtct cctcaaccaa
     4561 aatgtatcgt tcttgatact actaaggggc agggagttgc cttcttagaa gaattagaaa
     4621 gcaatcacca tttgcgtttg tcgggtcaat tacgggaaga tttagagcaa gtaactcttg
     4681 ttttagcgag agagttggag gtgacggaat gagacagaca aaggagatgc gactggttta
     4741 tagtgatttt ctagctcagg tagggcagga agacacaacc atagcagcta ttgaagcaga
     4801 tttatccagt tcaatggcta ccaacaaatt gtcctctgtt ctgggtggac gctatgtcaa
     4861 tgtaggtatc atggagcagg aaatggtagg ggtagcagcc ggactatctc ttctaggata
     4921 caagccatac attcatactt tcggaccatt tgctagtcgt agagtctatg atcaggtgtt
     4981 tatctctcta gcttatgccc agcttaatgc cacgatcatt ggttccgatg cgggggtatc
     5041 agcggagatg aatggtggga ctcacatgcc gtttgaggag ctgggcttaa tgcggctcat
     5101 tccaaaagcg cgtgtttatg aggtcagtga cgatgtccag tttcaagctg ttcttaaaga
     5161 aaccatcaag gtagacgggt tgaagtacat tcgtaccatt cggaaagcac caacggctat
     5221 ttatcaaggt ggagaagatt ttagcaaagg ctactgtgtc cttaggcaag gggaggatat
     5281 gaccttgctt gcgagtggta ttatggtaga gcaggcatta aaggcggcgg atcagttaga
     5341 ggctcaagga gtatctgttc aagtcattga tctttttcgt atcaaaccaa ttcatgaaga
     5401 cataccagct ctattatcgg gaaggccagt attaactgta gaaaatcata atcgaattgg
     5461 cggcctaggt agtagcattt gtgaattaat ggctacagat ttgacgaccc cagtacatcg
     5521 aattggtatt gaggagtcat ttggtcaagt tggtcaacag gcctatttga tggatgttta
     5581 tggactgaca gcagagcata ttgttaaaca agcacaatta atgttacaac aatagtgaga
     5641 tagtgattcg tattttatgt agcctttcga tttactttgg cttggaaata gtaaagcaaa
     5701 tcaaatgtaa gaaatcaagc tccacttagg aacttgattt tttctatact tcatccatta
     5761 ctttcacaat cttccatcct tgatgaaggc ttgcaattcc tgtcagaata tgggacacta
     5821 gaatcatgaa aaagatacaa cgtgaatttc aaaaaatata ttacaaccta gacaagattc
     5881 tcttgctctt ctttaccctg tttaccttta tggaatttgt ttggataccg ctcaattcat
     5941 ggatttctga ggggctctta gctatgacag ggcatgccta cctttcaccg acgaatttgt
     6001 tgtcggtgtt tgctgaaaat ctgctcgtga caggcttgtt tattctcctc ttttttgtca
     6061 acattgcaat tgcctatcta gaattagctc tattgttcac aggggtttgg caactgttgg
     6121 atgaaaaagt caagcacctc cccgactatt tacgggatgt acgagatagt atggtggcga
     6181 ttatccgtca cagcagcctg ccaaaggttt tatttctact cttttactca gttattcttc
     6241 tcccatttct acgacgggta ttaaatatct attattttaa taaaatcgta gtaccccaat
     6301 ttatcgtaga ttacctatcc aacacagtct ggctaggaat attgattttg ttctttctcc
     6361 tcttgttctt ctggctcgca tcacgcttta tgtacgctct gccgaacatt tactttgaac
     6421 acaggagtgt gaaggaatcc atcgcttatt cttggaagaa gaccaaggga agaaaacaag
     6481 tcagttcctt tttccgtctg atttggctgg tcacttttcc agtcctccta ttcacaggaa
     6541 tagggatatt gctctatcta gtacagctag tggctgaacc ttatctacca gacacaggcc
     6601 cttcatattg gctggcagtt gtttgttatg caatcctaaa attagcctac tacggagtag
     6661 ttgcactctt tatgatggga tttgtaagtc tcttaacagg gaaacaattg ccaaactacc
     6721 gccgtaaacg cctccgtcat cgcctgcgat tggcaatttt gctagtatct ggtctggtat
     6781 tcggtaccca aggagcgctt gcactctact atcccttcga taccctgcca gttaccattt
     6841 cccatcgcgg tgttgacaat ggcaatgctg tccagaactc tatagaggcc ctagagaaaa
     6901 cctctcagct caagccagat tatattgaga tggatgttca ggagacgaag gatggtcagt
     6961 ttattgtcat gcatgatacg gatttattgg ctttgacggg caatcccgga ggtacacatg
     7021 actatactct tgcagagttg acagggatga ctgcatcaga aaacggcatg gcagctccag
     7081 ttccttcttt tgatgaatat cttgaaaaag cagatgagct gggacagaaa ttattggtag
     7141 aaattaaagt gaccaaggca gattcgccaa aactcaccca gaatttctta aaaaaatacg
     7201 gtcaacgttt gattgccaaa ggacaccaga tgcaatcatt agactaccgt actattatcg
     7261 aaataaagca gtatagcgag aaattagtat ccttctttat tcttccgttc aactctatct
     7321 atccgacgac ggttgctgac ggctatacta tggagtatac ctcgcttgat caaaacttta
     7381 tggtaaaatc ttggattcgt gggaagtcag tttatgcttg gacaccgaat gaagaagaga
     7441 gtatgaccaa gatgttgctg ctacaagtag acggtatcat cactgacaac atgaccgacc
     7501 tccaaagtct gatggaggaa atgaaagaga atcgacgtta tccagacctc tttttcctgc
     7561 aatttcagtc tttgatttat aattttgaat aaaaaaacgc gagaggagaa tatccaatcg
     7621 cgttttcttt taaaaaggta atttacctgc aaaggcacct agttttttct gagttgcctc
     7681 gtcaactttt gtaagtgcag cgttgacggc ttggattgtc atttcttgca aggtttcaag
     7741 gtcgtctgca tccacaacat cagccttgaa gtcgatagaa accaatttct tatctccagt
     7801 aaaagtagca gtaaccaagt cctgtacaga gctaccagta aattgagtag cagccaactc
     7861 agcttggctc ttctccattt gtttttgaag tttttgagct tggcgcatca tgttttgcat
     7921 gttcatcata agatttttaa gattcctttc gtaccaaggg tttagaccct ctggttaaat
     7981 tttcgttgcc ttattttgcc ttattgttaa aaattttcaa aggcagaggc gtagtaaata
     8041 ttataacatg ttttatgtag ataatgctac cttcttaaaa taagttatag tcagcaatat
     8101 cggacataaa tttgacatat taatctattt taaattgact ttgagggata aattcgctat
     8161 aatataagaa aaaactggtt ataaccagaa atcaaggagg agctatgttc cgtttagcaa
     8221 aagaagaatt agaaaagttg ggagctatta ttacggcgac cgaaatttac caacagcctg
     8281 gcttgtggaa agaggcttat caactctatc ttgaccaatt ggaaaaaatc gagggttttc
     8341 taaaatcaat caaggaaaaa catgactttg ttcacgttgt ttttacaggt gcagggactt
     8401 ctgactttgt tgggcaaagt attgccaact acctcaacca agtcaatgac ttgaaacaca
     8461 ttcgtttttc tgccattggt acagtggagc tggttagtcg cccacatgac tatttacagg
     8521 cagatgtgcc aacgattttg gtatcctttg cccgttcagg gaattcacca gaaagtgtgg
     8581 cagcagtaga agttgccaag caattggttg atcagcttta ccaagttact attacttgtg
     8641 cgccagaggg caaattggct ctggcagccg aaggagattc ggacaatctc ttgctcttgc
     8701 aaccagctgg ttcaaacgat aagggctttg ccatgacagg ttcttacagc tgtatggctc
     8761 tgacagccct cctcgtcttc tcgccagcca gtcaagaaga aaaagctgct tgggttgaga
     8821 tcattgcccg tctgggtcaa gatgttttgg accgtgaaga ctacgtgcaa gacctgatta
     8881 accttgattt tgagcgagtg atttacctcg gttcaggtgg tttctatggt cttgcccacg
     8941 aagctcagtt gaaaattctg gaattgacag caggcaaaat tgcgaccatg tacgagtcac
     9001 cactcggttt ccgtcatgga ccaaaatcct tcatcgatga aaagaccttg attttcctct
     9061 ttgcctcaaa cgatgcctac acacgtcagt atgatgtgga cttgcttaat gaagttcatg
     9121 gtgatggcat agcagagcgg atagtggcat tgtcggctga caagctagca gatacagagg
     9181 cagctaactt tgtcttggca gaaggtggag cagatctgcc agatgttttc ctaaccttcc
     9241 cttacatcat ctttgcccaa acggtgtcta ttatggcagc cattaagtgc aacaacttgc
     9301 cagatacacc atcgccaaca ggcacagtca accgtgtggt gcagggcgtg attatacatc
     9361 cactaccata aacaaggtat caaaagagct tccgcaaggg gaagctcttt tttaatatgg
     9421 caaatgaagg atagactgct ccaaatcaat cgaaatagtc caatcgctat tatcccgaac
     9481 agtacactca aagtcagtgg tgtagagaat cagctccagc acatcgcctt ttttcaattg
     9541 gtaaatagtc ggctgcagtt tccagctcag ttccatccac tggtctggca ccacttcctc
     9601 aacagtcatt aggtcggtgc ggttctgcag gttcataaag cccttggtta ccaagcgttg
     9661 tggcatatct acataaggca actccaccag attttcttgg gcatggtagc gaccgttatc
     9721 cagactcaac cgcgtttttg gtgtcgggat tggggctagg cgttttttat ttcccttgtc
     9781 caatagctga gcagataaga gacctttagc tacactagaa gcgacacgga gtttcagcgt
     9841 gacctgcccg ttaagcaaga ggtcctctgt tacaggcagg tcaatgctga cttggttgcc
     9901 cttgcctgca tagaggtctt ggtggaaggc agggtaggat ttgccgtagc ggtcaaaatc
     9961 ttcttgggga tactgattgg aaatggtctg gcttccagtt cccagtggca agacagcctc
    10021 ttgtccaccg ccaaaggtgt ccaaggtcgt ccaagtttgc tcaccgcagt tgtcctgcca
    10081 gatgaccgtt ggcagttggt agttattctc gtagcccagc agtttttgac tgagtagggc
    10141 gttcatggac tcacggaagt cgatagactg ccagttgttc atatacacgt gggcaccgtt
    10201 gtggaagaag aggtgctttt tgatctgact tggcagggca tggaacatat tccagacatg
    10261 gattggcttg acattccagt cctgtgagcc gtgggtaaag actacctcac acttgacttt
    10321 gtcagcctgg agcaggtagt tacggtcatg ccaatactgg ttgtagtcgc cactggtgcg
    10381 gtccagggca gcacgttctg ccgccagtcc tttttcgtag gctgctttat tgcggaggaa
    10441 gtcacctgct tgcaaactct tggagtaggt cagggcggtc aagctgtcca aatcttcgcc
    10501 tggatagcca ccagggctgg tcaccagccc gttttcacgg tagtagtcat accaagagga
    10561 aatccctgct tctgcgatga tgacttccaa tccgtccacg ccagttgttg ccaaggcatt
    10621 ggacatggta ccgagataag acagtcccgt cgtcgctacc ttaccattgg cccaatcggc
    10681 cttgacctca agcgagcgag tatggtctgt gtaggccttg gtgcgaccgt tcagccagtc
    10741 aatcaccgct ttatagccct ccacctgctg gtagtcgcca gatgtcatgt agcctgtcga
    10801 gcctagcgtg ccaacaccag acacatggag gctggcaaag ccacgagcga ggaagtagtc
    10861 attgagggag taagaggtga tgtggcccag tttttcagtg gcagggctga caggcaggtc
    10921 ccgtttgtcc aagtctagct tggtgatgct ggtctgcttg acctcaatgg taccagctgg
    10981 tttttccgcc agttcccctt ccatcttatg cagggcctta tcgctggcta catcgttaac
    11041 tccctgatga taaggactat ttgtaatcac cgcaggaatt tttccgtcaa actgcggacg
    11101 gagaatggac agcttgacaa tatctgtctg cccggtccca gccgtatcga caggcgtttc
    11161 gacatagacc acctcacgaa taaggttttt ggttgaaaag gtcgctagcg atttgccgtt
    11221 gaagaagtgg tagtgattgt cctctggaat cagatcatcg ctgaccagct ggtcaatcaa
    11281 ggtgtttcca gacttggtac gagtagcgag tagctggtag aggttgtcaa tcatatctcc
    11341 atagatgaca gggaaattgc ttttctccac gaaatccatg acatctgtat aatccacacc
    11401 aggcacgaag cccagcaact gaaaggccac ttgatagaaa atcaggtctg tcaactcacg
    11461 atcagactgg aagaaggtca gcaggtctgt gtcccattct gcgatcatgt ttgacagggc
    11521 aaagtcagtg ttggctgtca ggaaatggca ctttctgaca aaggtttcta aatttgtctt
    11581 actacttgca ttaggaatca gttgaaatcc tagagcatca agctcttgca agtagacgga
    11641 ggtctctttt tttataaaag aaaattgatt aaagcgcata aattctcctc ttttttagga
    11701 taatagtcta taatagctat tatatctgat aagctagtgt ttgtctaaaa attatcagta
    11761 tatataaaga tattaatgta taaaacgacg atacaattag ttgtaaaatg acgaaatttt
    11821 ttatacaata ttgtagaatg actgaggagt gaaatgtatc gtgttgagaa aaaatgaaac
    11881 tatagtccct gttttacgta ttaataatag ggctattaat caaggatttt tagaaaaaaa
    11941 tctaggaatg aaaaccaagc tagaagatgg tccttttgct gattttggag ataaaacaag
    12001 tccagaaacg aagctcgttt tgacagaatc tcctggtaat cgcacccgtg ctgtcgaagg
    12061 gcttaaaaaa ctgaataaaa ttgtgataaa agtagacaat gcctctgaaa ttgaagcttt
    12121 actggcgcaa gggtcacagt atagtaagct ctaccaagga aaaaatggct atggttttga
    12181 agctgtgtcg ccagaaggag acaccttcct tttacacgca gaagcatctg ttgatgacct
    12241 aaaagcaatc cttccacctg ttccatttaa ggtgcaggat gacgtttctg gattgactgc
    12301 ttttacagta gagtctattt ggattaatac cccacaggct agtatcagcc aagactatta
    12361 tgaggctatc ctacctcaac aagccttttt gcattttgtt ggagcagaag gtaaggactt
    12421 attaattcct gcagaacaag tttgggattt agaaggcttg cgttttcccg tcgagcagga
    12481 ctttgattgg gcgcatttgg aaagccagtt ggaaggacca ttctttaaag ataaaaaagc
    12541 aagctttatt caaacggttg acccaagtgg tattgaattg tggttcgaaa aatgagacaa
    12601 gcgattttag acaagatttc agagcagatt gggcaaggag tttatcctgg tgccagtctg
    12661 gctctttttt ctaaggatca gtggcaggag tattatttgg ggacccagga tggtcagcta
    12721 ccagttgagg cgggtttgac ttatgatttg gcgtctgttt ccaaggtggt tggtgtgggg
    12781 actcttgcga cttttttggt taatagcgga gctttggagc tagataggac cttgcagtct
    12841 tattatcctg cttttgcgga tagtcaggtc accattcggc aattattgac ccataccagt
    12901 ggtatcgacc ccttcattcc taatcgggat agtctggatg ccgaccagtt caaggaagcg
    12961 attttgaaga ttaccgtaac ggataagaaa gatttcctct acacagacat taattttctc
    13021 ttgctgggct tcttattgga ggaaataggt ggagacagtc tggaccagct gattcgtcga
    13081 gaagttctag agccctttgg tatgtcccaa acctcctttg gaccagtcag tcaggcggta
    13141 ccgacggtgc gtggcgtgaa agcgggtctg gtacatgacc ctaaggcgcg tgtcttgggt
    13201 gttcacgcgg gtagtgcagg tctcttttcg accgtcaagg atctagaaat ctttttggag
    13261 cgctatctga cggctgactt tgcgacaaat ttaacgcagg attacggttt tgatgataag
    13321 cgcaagcggt ctctggcttg ggataagaag ggggactggt tgtcgcacac aggctatacg
    13381 gggaccttta ttatgtataa ccgtcccttg cagaaagctg cgatttttct ctcgaatcgt
    13441 acttttgaca aggatgagcg ggctcagtgg aagttggata gaaaccaggt catggctctg
    13501 atacggcaag ttctggagga agaggagcaa tgagatatgt tcttctgctg agagggatca
    13561 atgtcggtgg tcgtaacaaa attgtcttgg ctgaattgcg tcaagcggtg gcagatttgg
    13621 gctatgacaa ggttgaaact tacattaata gcggtaatct cttctttgat tcaaccaaga
    13681 atagagggga cattgttgct gaatttcaaa cttttttcac agaaagttgc cccttgggca
    13741 ggagactggt ggggcgatgc ggcttcttgg ggagccaatg cggcgcgtga tggtttccgt
    13801 acaggaacaa cacctgaagt tggagccatt atttcttgga atgatggcgc tctgggacac
    13861 gttgcctatg tgacagctgt taacgaggat ggacaaattc aagtcctcga agccaactat
    13921 cgt
//
LOCUS       DBNFCX010000059        13647 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.059, whole genome shotgun sequence.
ACCESSION   DBNFCX010000059 DBNFCX010000000
VERSION     DBNFCX010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 13647)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13647)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13647
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.059"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(58..330)
                     /locus_tag="AC1PJC_001516"
     CDS             complement(58..330)
                     /locus_tag="AC1PJC_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbG family protein"
                     /protein_id="HIP6620499.1"
                     /translation="MFEKKNRTCLTVYLHYNRDARKLSQYGDIVYHSKRLRYVLVYMD
                     QELVEATILKLKKERFVKKVVPSYIKELDQNFVGSLWRDEEPSVVG"
     gene            complement(457..1068)
                     /locus_tag="AC1PJC_001517"
     CDS             complement(457..1068)
                     /locus_tag="AC1PJC_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002262672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HIP6620500.1"
                     /translation="MSKRSNFMIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDN
                     MANSIIAQLLFLDAQDPTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGTAA
                     SMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNKLEKI
                     LADNSGKTVKQIHKDAERDYWMSAEETLAYGFIDQIMDNIKVK"
     gene            complement(1164..1793)
                     /gene="upp"
                     /locus_tag="AC1PJC_001518"
     CDS             complement(1164..1793)
                     /gene="upp"
                     /locus_tag="AC1PJC_001518"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002883819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HIP6620501.1"
                     /translation="MGKFQVISHPLIQHKLSILRRTSTSTKDFRELVNEIAMLMGYEV
                     LRDLPLEDVEIETPITKTVQKQIAGKKLAIVPILRAGVGMVDGLLSLVPAAKVGHIGM
                     YRDEETLQPVEYLVKLPEDIDQRHIFVVDPMLATGGSAILAVDSLKKRGASNIKFVAL
                     VSAPEGVKALQDAHPDIDIYTAALDEKLNEKGYIVPGLGDAGDRLFGTK"
     gene            complement(1873..3489)
                     /locus_tag="AC1PJC_001519"
     CDS             complement(1873..3489)
                     /locus_tag="AC1PJC_001519"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0004556 - alpha-amylase activity [Evidence
                     IEA];
                     GO_function: GO:0004574 - oligo-1,6-glucosidase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009311 - oligosaccharide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 13 protein"
                     /protein_id="HIP6620502.1"
                     /translation="MPEIQKTDWWKKSVIYQIYPRSFQDSNGDGVGDIRGIISRLDYL
                     HELGIDAIWLSPVYQSPMDDNGYDISNYQGIAPEFGTMEDMEELIAEGHKRNIKIIMD
                     LVLNHTSDEHLWFQEALKGPDNPYYDYYVWADEPNELRSTFSGSAWEYVPHLNKYYLH
                     QFSVKQPDLNWKNPALKQEIWDMINFWIEKGVGGFRLDVIDLIGKEPEKLITADGPTL
                     HPLIQELNEKTFGAYDLVTVGEIWSANPENAQLYSHPDRKEFSMIFQFEHVGLDQQEG
                     KEKWDLAPLDPARLHKVLSKWQTELVGKGWNSLFWNNHDLPRAISRFGDDRPAFRELS
                     GKMLAIYLHFMSGTPYIYQGEEIGMINTPITDISQADDIETRRMYAERIENGFTKEEL
                     ITSINAKGRDNARRPMQWTEAEGAGFSTGQAWLALGDTVKDINVEKALADKQSLFYTY
                     QKLIALRKEYPCMSEGKYEVIETGNSSVMAYRKYDEQDDFIILVNFSSQEQAYTIAVE
                     EYSIFMNNYENEEAINKGMLRPFEAIVFKK"
     gene            complement(3562..5010)
                     /gene="gtfA"
                     /locus_tag="AC1PJC_001520"
     CDS             complement(3562..5010)
                     /gene="gtfA"
                     /locus_tag="AC1PJC_001520"
                     /EC_number="2.4.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004645 - 1,4-alpha-oligoglucan
                     phosphorylase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sucrose phosphorylase"
                     /protein_id="HIP6620503.1"
                     /translation="MKIKNQAMLITYSDSLGKNLKDLKKVLEGPLKDVVGGIHILPFF
                     PSSGDRGFAPMDYTKVDPAFGDWSDIEALSKDYYLMFDFMINHISAKSPYFLDFLEKK
                     DESAYADLFIRYKNFWPNGEPTQEDVDLIYKRKPRAPYRIAKFADGSEEKVWCTFDEQ
                     QIDLDVTTETTRRFIQENLEQLAEHGASIIRLDAFAYANKKIGTNCFFVEPDIWEMLH
                     FPRQLLAPKDVEILPEIHEHYTIQQKIAEQDYYVYDFALPMLVLHALYSGHVNRLVHW
                     MEICPRKQFTTLDTHDGIGVVDVKDLLTDEETEETREALYAQGANVKKIYSTEAYNNL
                     DIYQINCTYYSALGNNDQAYLLARVLQCFAPGIPQIYYVGLLAGENDIELLESSKEGR
                     NINRHYYDLEEIEQEVQRPVVQSLFKLLKFRNTSPAFDGEFSVKMLDETSMEIFWNNQ
                     DAGVSARLTASLKEKSFEIVEIEEGKITTIEL"
     gene            complement(5081..5911)
                     /locus_tag="AC1PJC_001521"
     CDS             complement(5081..5911)
                     /locus_tag="AC1PJC_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HIP6620504.1"
                     /translation="MNTQKQKNWWVYLVLFSGILFMFIPLLVTIISSFKPTKEITSNF
                     FGLPENFTLNNYERLFNDGIVQYFGNSALITIVAVSLILLVIPMAAFAVARQMKRQTV
                     FNFIYFFLIIGIFVPFQVIMLPMTKLMSSLGLNNIVGLIILYLTYAVPQALFLYVGYI
                     KTIVPEEMDEAAAIDGCDKFTMYWKIIFPLMKPMHATVLIINALWVWNDFLLPLLVLN
                     RDQSMWTLPLFQYNYQGMYFSDYGPSFASYVVGIIPILLVYLVFQKHIISGMTSGSVK
                     "
     gene            complement(5922..6794)
                     /locus_tag="AC1PJC_001522"
     CDS             complement(5922..6794)
                     /locus_tag="AC1PJC_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HIP6620505.1"
                     /translation="MNQKGFIAKYWPYLFVAIPIGLQLIFFFYPLFTGIYYSLTDWNG
                     LTSDFSLIGIQNYLDILKNPDFYTSMTFTIIFTIGLVIGEIVIGIWLASLLNRKIKAV
                     GFFRTWYFFPAVLSTVTLGLIFVQLFNYGFTQIGEILHIDWLMENLLVQENTVIPAVL
                     FVALWQGLAMPVIIFLSGLQSIPEDVKEAAAIDGASRSQQFFNIELPFLLPSISMVFI
                     LAMKSGLTAFDLIFALTSGGPDGKTESLGLLVYNYAFVDNKFSYANALAVVLFIFIIV
                     ISLIQMRISKKFEI"
     gene            complement(6929..8164)
                     /locus_tag="AC1PJC_001523"
     CDS             complement(6929..8164)
                     /locus_tag="AC1PJC_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HIP6620506.1"
                     /translation="MKMKTFLKCASVCAFASFLVACGNASSSDKVEIEYFSQKPEMQA
                     TLQEIINDFEKENPTIDVKFSNVPDAGTVLKTRMANNEAPDVINIYPQNADFKAYAAD
                     GRFLEIGDDAGLSHLKDGAVTPYLVNEKNYTLPLTANAYGIYYNKDKFKELGLEVPTT
                     YAEFVALVDKIKADSSAAPFALSLNDAWSLNGYHQLAWVTVAGGFDGAEDILIRSAKG
                     AIQDDATTKAVLERLQLLKDNGQKGATGALYADAVAAFAAGDALMLPQGTWAATAVNQ
                     QEPEFEYGMFTFPGDKEGGDYTIGAADLALSISADTEHPEESKKFLEYLSRPEVIQKY
                     YDVDGSPTSVEGVDTEGKFEETAGVTQYAFTDKHVVWLQSEWESEEEFWNITAEMVKK
                     PDSAELVKKLNAFFDPMKK"
     gene            complement(8177..10351)
                     /locus_tag="AC1PJC_001524"
     CDS             complement(8177..10351)
                     /locus_tag="AC1PJC_001524"
                     /EC_number="3.2.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004557 - alpha-galactosidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0000272 - polysaccharide catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-galactosidase"
                     /protein_id="HIP6620507.1"
                     /translation="MNVIEIYNEKQIFHLKTREFSYIIQVLETGDLVHRYFGKKIEKF
                     SDGNKITYLDRSFSPSPITGDRTYSLDVLPLEYSSNGLGDFRTSALDVRNEFGVTLDL
                     KYKEYRLYKGKKELRGLPASFGNQEEVESLEIDLYDQLTDITVTLQYSVFEEASYLAR
                     SATIQTGKYPCKLEKVLSATLDFPHQDFIVHSLAGRYAYEKEWTQTPLTKGQYSIGSI
                     RGASSHSRTPFLALASPDASEDKGDVYAAHLVYSGNFTAFVETTAMETSRLGLGLESH
                     YFSWQLDKDDRFQTPEVLLSYTDKGFTGMTQNSHHFITKHLIRSSFVNKPRPILINNW
                     EATYFEFTEEKILQLAQVASRAGIELFVLDDGWFGKRNNDESSLGDWKVNLDKLPNGL
                     NGLAERINELGMKFGLWFEPEMISIDSDLYREHPDWAIRTEGRLPIYSREQLVLDLTK
                     QEVCDYIIDSVSSILESANISYVKWDMNRNITNIPEGLANDQRFEFHHRYMLGLYRVL
                     DHLTKRFPDILFESCAGGGGRNDLGIMYYMPQAWASDDTDAIERLSIQEGTSLIYPTS
                     SIGAHVSAVPNHQVGRITPLATRGNVAMMGGAFGYELDLTKLSEKELDEISQQIETYH
                     SICETIQFGQLYRLKKTSNTWAANYVSQDKKQAVFTFVKILAKPEAPLLHVRLKGLDP
                     DALYECPQLGETFYGDELMNIGLTMPHVQKDYFSVQYIFNKI"
     gene            10456..11295
                     /locus_tag="AC1PJC_001525"
     CDS             10456..11295
                     /locus_tag="AC1PJC_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HIP6620508.1"
                     /translation="MNILNIYNELDSHNFDLNVDHYGAEQCDKGYSFGPTIRDNFVLH
                     FITNGKGKILVDGKTSYLSAGDIFILPKDVSIFYQADDIDPWTYVWVGFSGSRAKDLL
                     NQSQLLENYYLHSNLESPILGYMHQINHVQMHPIPSITELVLIGYLNQLLAALIEEFP
                     SETLIKPETQTKHYVQQAIKMIHNHYAHPIKVSEIADFLALSRSYLYKIFKQETGYSI
                     KDYILQVKMNRSCQLLEDASRSITEIAYSVGYQDPLTFSAAFKNYFHMSPTEFRKTQK
                     NKD"
     gene            complement(11327..12487)
                     /locus_tag="AC1PJC_001526"
     CDS             complement(11327..12487)
                     /locus_tag="AC1PJC_001526"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0047804 - cysteine-S-conjugate beta-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MalY/PatB family protein"
                     /protein_id="HIP6620509.1"
                     /translation="MTQYNFIDSPNRLSQHAEKWRKVETDKELLPLWIADMDFEPLPE
                     IRQVIRDYADHHVFGYPYASDSLYQSIIDWEDRQHGYKIERESILLIEGVVPALSVAI
                     QSLTEEGDAVLINTPVYPPFARTVKLNNRQLVTNSLVDMDGVFRIDFDQLEKDIVENQ
                     VKLYIFCNPHNPGGRVWTREEVLAIGCLCQKHGVILVSDEIHQDLTLYGHKHYSFNTV
                     DESFKEFSIILSSATKTFNIAGTKNSFAIIENPSIRKTFAKRQLINNQHEIPTIGLLT
                     TEAAFTYGDEWLKELKVILERNIDFVEEYLTTRTRIKVMKPQGTYLIWLDFSAYELEH
                     AELFDILHCKAKLILNDGLTFGKEGKYHARLNVAAPFNMIEEACQRLGKVFG"
     gene            complement(12491..13582)
                     /locus_tag="AC1PJC_001527"
     CDS             complement(12491..13582)
                     /locus_tag="AC1PJC_001527"
                     /EC_number="2.5.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine gamma-synthase"
                     /protein_id="HIP6620510.1"
                     /translation="MTDYKIDTILAHTGINSDERTGALISPIHLSTTYQHPEFGQSTG
                     YDYTRTKNPTRASLETTLAAIEKADYALATSSGMAALVLLFNGFPVGSQVVAARDLYG
                     GSFRWFNEQESIGRFQFTYANTEEELIAAITEETDYVYLETPTNPLMVEFDIAKVSAI
                     AHAKGAKVIVDNTFYSPIYQNPLLLGADVVLHSATKYLSGHNDVLAGALMTNDQALYD
                     KLFYDQNTSGPTLSPLDSYLLMRGLKTLSLRMERATQNAQKIVAYLEKSPAVKQVYYT
                     GKGGMISVKVVDESRIPHILNTLKVFTFAESLGGVESLITYPATQTHADIPAETRHSY
                     GLTDDLLRLSIGIEDAEDLIADLKTALEG"
BASE COUNT         4092 a         2914 c         2497 g         4144 t
ORIGIN      
        1 aaagaaaaaa tttttaaaat aaaaaattag caggggatac atacctgcta attccgacta
       61 tcctacaact gatggttctt cgtctctcca tagactacct acaaagtttt ggtctaattc
      121 cttaatgtat gaaggaacca ctttttttac aaaacgttcc tttttcaatt ttaatatggt
      181 agcttctact agttcttgat ccatatacac caaaacatat cgcaagcgtt tggaatggta
      241 aacaatatct ccatattggc tgagtttacg tgcatcacga ttgtagtgta aatagacagt
      301 taagcaagtg cgatttttct tctcaaacat gtcttctcct ctaaaaattc tctttctata
      361 ttataccgtt ttcaatgata aatgaaaagc tccaactacc tgtaaaagag ttggagctaa
      421 gaggaatagt cagtactatt acatatttgt cactgcttat ttgactttta tattgtccat
      481 aatctggtca ataaatccgt aagccaaggt ttcttcagct gacatccagt aatcgcgttc
      541 cgcatcctta tggatttgct tgactgtctt acctgagttg tctgccaaga ttttttctag
      601 cttattacgt gtttttaata ggtgttctgc agcaatagcc atatctgttt gctgagtgcc
      661 accacctgtt ccgcccattg gctggtgaat catgtactct gcatttggca acatgaaacg
      721 tttgcccttg gcaccgcttg atgcaatgat ggttcccatg ctcgcagctg ttcccataac
      781 gatggtttga acatcagctt taatgaaatt catcgtgtct acaatagcaa gacctgctga
      841 caccgatcct cctggcgtat taacatagag gtaaatatcc tttgtagggt cttgggcatc
      901 aaggaaaagc aattgtgcaa tgatagagtt tgccatgttg tcctcaactg gtcctgtcaa
      961 catgataata cggtctttca aaaggcgtga gtaaatatca taagaacgct caccacggct
     1021 agtttgttca ataactactg gaatcataaa attactcctt ttcgagattt tctgtaccca
     1081 ttatatatga atagtcaaaa ttggtcaaat aaaaaacacg atttcaggaa atgaaaaaga
     1141 aaccagcaga gctgatttct taattatttt gtaccgaaca ggcggtcacc tgcatctccc
     1201 aaacctggta cgatgtagcc tttttcattg agtttttcat ccaaagctgc tgtgtaaata
     1261 tcaatgtctg gatgtgcatc ttgaagagct tttacacctt ctggagctga aacaagagca
     1321 acaaatttga tatttgaagc accacgtttt ttcaatgaat caactgcaag aatagctgaa
     1381 ccacctgtag caagcattgg gtcaactaca aaaatatgac gttgatcaat gtcttctggt
     1441 aatttcacaa gatactcaac gggttgaagg gtttcttcat cgcggtacat accgatgtga
     1501 ccaactttag ctgctggtac caagcttagc aaaccatcaa ccataccaac acctgcacga
     1561 agaattggta cgatagctaa ttttttacct gcaatttgtt tctgaactgt tttagtgatt
     1621 ggcgtttcaa tctccacatc ttcaagtggc aagtcacgca aaacttcgta acccatcagc
     1681 atcgcgattt cattaaccaa ctcacgaaaa tcctttgttg aagtagatgt acgacgaagg
     1741 atagacaact tatgctgaat gagtgggtgt gaaatgactt ggaatttccc catgatgata
     1801 aaacctctct tttttgtttt ttctatttta ccaaaaaaat tgaaaaaatg cttgagaata
     1861 tggcaaattt atttattttt tgaaaacgat agcttcaaaa ggtctcaaca tccctttatt
     1921 aatcgcctct tcgttttcat aattgttcat gaaaatagaa tattcttcca cagctatagt
     1981 ataagcctgc tcctggcttg aaaagtttac taatatgatg aaatcatcct gttcatcata
     2041 tttacggtag gccattaccg agctatttcc agtctctatc acttcatatt ttccttcgga
     2101 catacaagga tactctttcc gaagagcaat taatttctga taggtataga aaagcgattg
     2161 tttgtctgca agtgctttct caacgttgat gtctttaaca gtatctccca aagccagcca
     2221 ggcttgacct gtactgaagc ctgctccttc tgcctctgtc cattgcattg gacggcgagc
     2281 attatctcga cctttggcat ttatagaagt aatcaattcc tccttggtga agccattttc
     2341 aatccgttcc gcatacatgc gacgtgtttc aatatcatcc gcttggctaa tatcagtaat
     2401 cggtgtgtta atcataccaa tttcctcacc ttggtagata taaggtgtcc ctgacataaa
     2461 atgaagataa atagctaaca ttttaccact tagttcacga aatgcaggtc tatcatcacc
     2521 gaagcgagaa atggcacgag gtaaatcgtg gttattccag aaaagcgagt tccagccttt
     2581 accaaccagt tcagtctgcc atttggagag aaccttatgc aaacgagctg ggtcaagcgg
     2641 tgccaaatcc cacttttctt tcccttcctg ctgatcaagt cctacatgtt caaattggaa
     2701 aatcatcgaa aattcttttc tgtcaggatg tgaatataac tgagcatttt ctggattggc
     2761 actccagatt tccccaacag tcactaagtc gtatgcacca aaggttttct catttaattc
     2821 ctgaataaga ggatggagag tcggtccatc ggctgtaatt aatttttctg gttcttttcc
     2881 aatcaaatca atcacatcta gcctgaaacc accgacacct ttttcaatcc aaaaattgat
     2941 catatcccag atttcttgtt tcagagcagg atttttccag ttcaaatccg gttgcttaac
     3001 agagaattgg tggagatagt atttgttcag atgtggaacg tattcccaag cagagcctga
     3061 aaaggtcgag cgtaattcat tcggctcatc agcccaaaca taataatcat aatagggatt
     3121 atctggtcct ttgagggctt cttgaaacca caaatgttca tccgaggtat gattgagcac
     3181 caaatccatg attattttga tattgcgctt atggccttct gcaatcagct cttccatatc
     3241 ttccatggtc ccaaattctg gagcaattcc ttggtaatta ctgatgtcgt aaccattgtc
     3301 atccatgggg gactgataaa caggactgag ccaaatagca tcaattccaa gctcatggag
     3361 ataatctaat cggctgataa tccctcgaat atcccctact ccatctccat ttgaatcttg
     3421 aaaactacga gggtaaattt ggtaaatgac ggacttcttc caccaatctg ttttttgtat
     3481 ttctggcatt tgattgatcc tttctgtaca atcttattta cgcaagaaaa agaggaatcc
     3541 ccctctttct atataatcat attataactc aattgtggta attttgccct cttcaatttc
     3601 aacaatttca aaggattttt cttttaggct tgctgttaga cgggcagaca cccctgcatc
     3661 ttgattattc cagaaaattt ccatacttgt ttcatccaac atcttaacag agaactcccc
     3721 gtcgaaagct ggacttgtat tgcggaattt aaggagtttg aacaaggatt gtacaactgg
     3781 ccgttgcact tcctgctcaa tttcttccaa atcatagtaa tggcgattga tattgcgacc
     3841 ttccttgctt gattctaaaa gttcaatatc attttcacct gcaagtaaac caacatagta
     3901 aatctgtgga atacctggtg caaagcattg gagaacacgc gccaatagat aagcttgatc
     3961 attattgcca agagcagaat aataagtaca gttaatctga taaatatcca aattattata
     4021 ggcttctgta ctataaattt tcttcacatt ggcaccttgt gcatacaagg cttcacgggt
     4081 ctcctctgtc tcctcatccg tcagcaaatc cttaacatcc acaacaccga ttccatcatg
     4141 tgtatcaaga gttgtaaatt gcttgcgagg gcaaatctcc atccagtgaa ccaggcgatt
     4201 gacatgacca gaatacaaag cgtggagaac cagcattggc aaggcaaaat cataaacata
     4261 ataatcttgc tcggcaattt tctgctgaat ggtgtagtgt tcatgaattt ctggtaagat
     4321 ttctacatct tttggtgcca ataactgacg tggaaaatgt agcatttccc aaatatcagg
     4381 ctccacaaag aaacaattgg ttcctatttt cttattggca taagcaaagg cgtccaaacg
     4441 aatgatcgaa gcaccatgtt ctgccaactg ttccagattt tcttggatga aacggcgtgt
     4501 tgtctctgta gtcacatcca agtcaatctg ctgctcatca aaggtacacc ataccttctc
     4561 ctcgctacca tcagcaaatt tggcaattcg atatggagca cgaggtttac gcttatagat
     4621 caaatcaaca tcttcttgcg ttggctcacc atttggccaa aagtttttat aacgaataaa
     4681 caaatccgca taagctgatt catctttctt ttcaagaaaa tcaaggaaat acggtgactt
     4741 ggctgaaata tgattgatca taaaatcgaa catcagatag tagtccttac tcaatgcttc
     4801 aatatctgac caatctccaa atgcaggatc tacctttgta taatccattg gtgcaaaccc
     4861 acggtcacct gatgatggga agaatggtag aatgtgaata cctcccacaa catcctttaa
     4921 cggcccctca agaacttttt tcaaatcctt gagattctta cccaaactgt ctgagtaagt
     4981 aatcaacata gcttggtttt taattttcat cgatactctc ctctgtaagc cttttctttt
     5041 ttgttatttt ataaaaggtt gaactagtca accttagtaa ttatttgaca gaaccactcg
     5101 tcatacctga aataatatgt ttttggaaga caagatagac aagtaagatt ggaataattc
     5161 caaccacata ggatgcaaat gatggtccat aatcactgaa atacatgcct tgatagttgt
     5221 attggaaaag tggtaaagtc cacatgcttt ggtcacggtt caataccaat aggggcaaga
     5281 ggaaatcgtt ccagacccag agggcattga taatcaaaac agttgcatgc ataggtttca
     5341 tgagtgggaa aatgattttc cagtacatgg taaatttatc acagccatca atagctgcag
     5401 cctcatccat ttcctcagga acaatggtct taatatagcc gacatagagg aagagggcct
     5461 gaggaactgc ataggtcaaa tatagaatta tcaaaccgac aatattgttc aaaccaagac
     5521 ttgacattaa tttggtcatt gggagcataa ttacctgaaa aggtacaaaa atcccaataa
     5581 tcaagaaaaa gtagataaaa ttaaacactg tctggcgttt catttgacgg gctactgcga
     5641 aagctgccat tggaataacc agtaaaatca agctaacagc tacaatcgta atcaaggcag
     5701 aattgccaaa atattgtaca atcccatcgt taaacaagcg ttcgtagttg tttaaggtga
     5761 aattttcagg aagaccaaag aagttactcg tgatttcctt tgtaggtttg aacgaactta
     5821 taatcgtcac aagtagcgga ataaacatga agagaatacc gctgaagagc acgagataga
     5881 cccaccaatt tttctgtttt tgagtattca tgacagtcct cctaaatttc aaatttcttc
     5941 gaaattctca tctgaatcaa tgagatgaca ataatgaaga tgaagagtac tacagctaaa
     6001 gcattggcat aagagaattt gttgtctaca aaggcatagt tgtaaacgag taaacccaag
     6061 gattctgttt tgccatctgg tccaccactt gtcaatgcaa agataagatc aaatgctgtc
     6121 aaacctgatt tcatagccaa gatgaaaacc atactgatag atggcaataa gaatggaagc
     6181 tcaatgttga agaactgttg agaacgactt gcaccatcaa tagcagccgc ttccttcaca
     6241 tcttctggaa tactttgcag accagacaag aagatgataa ccggcatcgc caacccttgc
     6301 caaagagcca caaaaagtac agctggaatg accgtatttt cttgtaccaa taagttttcc
     6361 atcaaccaat cgatatgaag gatttctcca atctgtgtaa aaccatagtt gaacagctga
     6421 acgaaaatca atcctaaagt gactgtggat agcactgctg ggaagaaata ccaagttcta
     6481 aagaaaccaa ctgctttaat cttacgattg aggagactag ccaaccaaat tccgataaca
     6541 atttcaccaa tgactaaacc gatggtaaag ataatggtaa aagtcatgga agtataaaaa
     6601 tcaggatttt ttaaaatgtc tagatagttt tgaataccaa ttaaactaaa atcagatgtc
     6661 aatccattcc aatccgtcaa gctataatag atacctgtaa atagaggata gaagaaaaag
     6721 attaactgta ggccaattgg tatggcaaca aatagatagg gccaatattt ggcaataaaa
     6781 cctttttgat tcatcatggt actccttttt gataaagtta tagttgctta gtctcagttc
     6841 aaggaatccc atagggttac taaaactgac actaggcaac tataaggagg ctaggctaca
     6901 actagcccct gcttatagtt ttcctggatt attttttcat tgggtcaaag aatgcattca
     6961 gttttttcac taattctgct gagtctggtt ttttaaccat ttcagcagtg atattccaga
     7021 actcttcttc tgattcccat tcagattgca accaaactac gtgtttgtca gtgaaggcgt
     7081 attgcgtcac tccagcagtt tcttcaaact tgccttctgt atctacacct tcaactgaag
     7141 ttggtgagcc atctacatca tagtatttct ggataacttc tggacgagag aggtattcta
     7201 ggaatttttt agactcttct gggtgctctg tatctgctga aatagataga gcaaggtcag
     7261 ctgcaccgat ggtatagtcg ccaccttctt tatcaccagg gaatgtaaac ataccatatt
     7321 caaattctgg ttcttgttgg tttacagctg tagctgccca tgtaccttgt ggaagcatga
     7381 gagcatcacc tgctgcaaag gctgccaccg catctgcata gagcgcgcct gttgcccctt
     7441 tttgtccatt gtctttcaac aattgcaagc gttctaacac tgcttttgtt gtagcatcat
     7501 cttgaatcgc tccctttgca ctacgaatca gaatatcttc tgcaccatca aatccacccg
     7561 caacagttac ccaagctaac tgatggtagc cgttcaatga ccaagcatcg ttcaatgaaa
     7621 gagcaaacgg tgctgcactg ctatcagcct tgattttgtc taccaaagcc acaaattctg
     7681 cataggtagt tggaacttcg agacccaatt ctttgaactt atccttatta tagtaaattc
     7741 cgtaggcatt agctgtcaaa ggaagggtat aatttttttc gttaacaaga tatggtgtta
     7801 cagcaccatc ttttagatga ctgagacctg catcatcacc aatttctagg aaacgaccat
     7861 ccgctgcgta tgctttgaag tccgcatttt gtggataaat gttgatgaca tctggcgctt
     7921 cgttatttgc catacgggtt ttcagaacag ttcctgcatc tggtacattt gaaaatttaa
     7981 catcaatcgt aggattttcc ttttcgaaat cattaataat ttcctgaaga gtagcctgca
     8041 tttcaggttt ttgtgagaaa tattctattt ctaccttatc gctactactt gcattcccac
     8101 aagcaaccaa aaagctggca aaagcacaaa ccgatgcaca ttttaaaaat gttttcattt
     8161 tcattataaa atcctcctag attttgttaa aaatatattg tacactaaaa taatcttttt
     8221 gaacatgtgg cattgtaaga ccaatgttca tcagttcatc cccgtagaat gtttctccca
     8281 attgagggca ttcatacaag gcatccgggt ctagcccctt caaccgaaca tgaagcaaag
     8341 gcgcttctgg cttggcaaga atttttacaa atgtaaagac cgcttgtttc ttatcttgac
     8401 taacataatt ggcagcccag gtattgctcg tctttttcag acggtagagc tggccgaatt
     8461 gtatagtttc acaaatggag tgataggttt cgatttgctg actgatttca tccaattcct
     8521 tttccgaaag tttcgttaaa tccagctcgt aaccaaacgc tcctcccatc atagctacat
     8581 tacctcgtgt agcaaggggc gtaatacgac caacttgatg atttggtaca gctgacacat
     8641 gtgctccgat agaagaagta ggataaatca aactagtacc ttcttgaata gataagcgct
     8701 caatcgcatc tgtatcatca cttgcccaag cttgcggcat gtaatacatg attcccaaat
     8761 cattacgacc tccaccgcct gcacaggatt cgaaaagaat atctgggaac cgcttggtaa
     8821 ggtggtctaa tacacggtag agacctagca tgtaacgatg gtggaactca aagcgctggt
     8881 catttgctaa accttcaggg atattggtga tattacggtt catatcccat tttacataag
     8941 aaatattggc tgattctaat atggaagaga cgctatcaat gatgtagtca cagacttcct
     9001 gcttggtcaa atccaaaact aattgttctc ggctgtagat tggtaagcgt ccttctgtgc
     9061 gaattgccca atcaggatgc tcacgataaa gatcgctatc aatagaaatc atctctggtt
     9121 caaaccacaa tccgaatttc ataccaagct catttattcg ctctgctaaa ccattcaaac
     9181 catttggcaa cttatccaaa ttgactttcc aatcgcccaa tgaactttca tcattgtttc
     9241 gtttaccaaa ccaaccatca tccagaacaa acaattcaat accagctcga cttgcaacct
     9301 gagctaactg taaaatcttt tcttctgtaa attcaaaata ggtcgcttcc cagttgttga
     9361 ttaaaatggg tcttggtttg tttacaaacg atgatcgaat gaggtgtttt gtgataaagt
     9421 gatgactatt ttgtgtcatg ccagtaaatc ctttatcagt atatgataag agaacttctg
     9481 gagtttgaaa ccggtcatcc ttatccaatt gccatgagaa atagtgactt tccaatccta
     9541 gtcccaatcg actggtttcc atggctgtcg tttcgacaaa tgctgtaaag ttgccgctat
     9601 agacaaggtg ggccgcataa acatcgccct tgtcctcact tgcatcaggt gaggctagtg
     9661 ctaagaaggg tgttcttgag tgacttgaag cacctcgaat gctaccaatc gaatactgac
     9721 cttttgtcaa tggggtctgt gtccactctt tttcataagc ataacgtcct gccaagctgt
     9781 gaacaatgaa atcttgatgt ggaaaatcaa gcgttgcaga caagaccttc tctagtttgc
     9841 atggatattt gccagtttga attgtagctg accgtgcgag ataggaagct tcttcaaaaa
     9901 cagaatactg aagtgttacg gtaatatctg tcaactgatc gtaaagatca atttcaagac
     9961 tctctacctc ttcttgattt ccaaaacttg ctggtaatcc cctcagttct tttttcccct
    10021 tgtataatcg atactctttg tattttaggt caagagtgac tccaaattcg ttccgaacat
    10081 ctaatgctga ggttctaaaa tctcccagac cattgctgga atattcgagt gggaggacat
    10141 ccaatgagta tgtcctatcc ccagtaattg gactcggaga aaacgatcga tctaaatatg
    10201 ttattttgtt tccatcgcta aatttttcga tttttttccc aaaataacga tgaaccagat
    10261 cgcctgtttc caacacttgg atgatataag agaattctct tgttttcagg tgaaaaatct
    10321 gtttttcatt ataaatctca atcacattca tctctcctat ctcttcttta tggtcttatt
    10381 gtacaaaatg aaaacgcttt atttaatggt cttttgtatt taaaacatgt tataatgttt
    10441 cctaggagga ttgaaatgaa tattctaaat atctataatg aattggatag tcataatttt
    10501 gacctaaatg tagaccatta cggtgccgaa caatgtgaca agggctattc cttcggtcct
    10561 actatccgtg ataattttgt cctgcatttt attacaaatg gaaaagggaa gattcttgta
    10621 gacggtaaga ctagctatct ttctgccggg gatatattta ttcttccaaa ggatgtttcc
    10681 attttctatc aagctgatga tatagacccg tggacctatg tatgggttgg ttttagtggt
    10741 tcacgagcaa aagacctact taatcaaagt caactgctag aaaactacta cctccactcc
    10801 aatctagagt caccaattct aggctacatg catcagatta accatgttca gatgcatccc
    10861 atcccctcta tcacagaatt ggtcttaatt ggctacctca accaactctt agcagcgctc
    10921 atcgaggaat ttcccagtga aacattaatt aagcctgaaa cacaaaccaa gcactatgtt
    10981 cagcaagcca tcaagatgat ccataaccac tatgcccatc caattaaagt ttctgaaata
    11041 gcagattttc tagctttaag ccgaagctat ctctataaaa tttttaagca ggaaaccggc
    11101 tattctatca aagattatat tttacaagta aaaatgaatc gttcttgtca actattagaa
    11161 gatgcttctc ggagtatcac tgaaatcgcc tattctgtcg gataccaaga ccctctcacc
    11221 ttcagcgcgg ccttcaaaaa ttatttccat atgagcccga cagaatttag aaaaacacaa
    11281 aaaaataagg attaggtgat tttactcaca cctagtcctt atttctttat ccaaaaacct
    11341 taccaagtcg ctgacaggct tcttcaatca tgttgaacgg tgctgctaca ttcagacgtg
    11401 catgatactt accttcctta ccaaaggtca aaccatcatt caaaatcaac ttcgctttac
    11461 aatgaagaat atcaaagagc tccgcatgct ctaactcata agcagaaaaa tcaagccaga
    11521 tgaggtaggt tccctggggc ttcatgacct tgatccttgt acgggttgtc aaatactctt
    11581 caacaaagtc tatatttctc tccaaaataa ccttcaactc cttcaaccac tcatctccat
    11641 aagtgaaagc agcttctgtg gttaacaagc caatcgttgg aatctcgtgc tgattattta
    11701 tcaattgacg cttagcgaaa gtcttgcgaa tgcttggatt ttcaatgatt gcaaaactat
    11761 tttttgtacc agcgatattg aaggtcttgg tcgcagatga taagatgatt gaaaactctt
    11821 taaaactttc atccactgtg ttaaaggaat aatgcttgtg accatacaag gtcaaatctt
    11881 gatgtatttc atctgagaca aggataacac catgtttctg acaaagacat ccaatggcca
    11941 acacttcctc tcttgtccaa actctaccac ctgggttgtg gggattacag aaaatataga
    12001 gtttcacttg attctctaca atgtcctttt caagctggtc aaaatcaatc ctaaaaacac
    12061 catccatatc aactagtgaa ttggtgacta gctgacgatt gtttaatttt acagtccgcg
    12121 caaagggtgg atagacaggt gtattaatta agactgcatc cccttcttct gtcaaagatt
    12181 gaatagccac agataaggca ggaacaactc cttcgatgag caggatggac tctctttcaa
    12241 tcttatagcc atgctgtcta tcttcccagt caataataga ctgatagagg ctgtcactag
    12301 cataaggata accaaaaaca tgatgatctg cgtagtcacg gataacttgg cgaatttctg
    12361 gtagaggctc aaagtccata tctgctatcc acaagggtaa gagttcttta tccgtctcta
    12421 cttttctcca tttttccgca tgctgggata gacgattcgg actatctata aaattatact
    12481 gtgtcatatc ttatccctcc aaggcagtct ttaaatctgc aatcaagtct tccgcatcct
    12541 ctataccaat agacagacga agcaaatcat ctgtcaaacc ataagaatga cgggtttcag
    12601 ctggaatgtc tgcgtgggtc tgagtggctg ggtaggtaat caagctttcc actcctccca
    12661 aactttctgc aaaggtaaag actttcaggg tgttgagaat atggggaatc cgactttcat
    12721 ctaccacctt aaccgaaatc atcccacctt ttcctgtgta gtaaacttgc ttgactgctg
    12781 gactcttctc caaataggca acaattttct gagcattttg tgtcgcccgc tccattcgaa
    12841 gcgagagggt tttgagtcca cgcatgagta agtaagaatc cagtggagat agggttggac
    12901 ccgatgtatt ttggtcataa aagagcttat catatagggc ttgatcattg gtcatcaaag
    12961 cgccagctag tacatcatta tgccctgaca gatacttggt cgctgagtgt aagacaacat
    13021 cggcaccaag caagagtgga ttttgataaa tagggctgta aaaagtgtta tcgacaatca
    13081 ccttagcacc tttggcatgg gcgatagccg aaaccttagc gatgtcaaac tccaccatga
    13141 gtgggttagt cggtgtctcc agataaacat agtctgtctc ttcggtgatg gctgcaatca
    13201 gctcctcctc ggtgtttgca taggtaaatt gaaatctacc gatactctct tgctcattga
    13261 accagcggaa ggaaccaccg tacaaatcac gcgccgctac cacttgactc cctacaggaa
    13321 aaccattaaa aagtaagacc agagcagcca ttcccgagct cgttgctagg gcatagtcgg
    13381 ccttttcaat agctgccaaa gtcgtctcta gactggcacg tgtcggattt tttgttctcg
    13441 tgtagtcata acctgtcgat tgaccaaact cagggtgttg ataggtcgtc gaaaggtgga
    13501 taggggaaat caaggcacct gttctctcat cgctattgat gcccgtatgc gctaaaatcg
    13561 tatcaatctt ataatctgtc ataacatcta ctccaatcta acttacaata tagtctagca
    13621 tgaaatagga gatttggtgt gaaaaat
//
LOCUS       DBNFCX010000060        13580 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.060, whole genome shotgun sequence.
ACCESSION   DBNFCX010000060 DBNFCX010000000
VERSION     DBNFCX010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 13580)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13580)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13580
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.060"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..1348
                     /gene="celB"
                     /locus_tag="AC1PJC_001528"
     CDS             <1..1348
                     /gene="celB"
                     /locus_tag="AC1PJC_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PTS cellobiose transporter subunit IIC"
                     /protein_id="HIP6620511.1"
                     /translation="EEQKGFFGLLDKYLMGPMGKLASYKVVRAITAAGMAAVPFTIVG
                     SMFLVFSILPQAFSFWPIVSDIFAASFDKFTPLYMVANTATMGVLSLYFALAIGYELT
                     KIYAEEEELNLTPLNGALLSLFAFIMTVPQIIFEEGAMSAVSSLEEGAVIVDGWAMGG
                     GVTRFGTTGIFTAIIMAVAAVLLYRMCVKNNWVIKMPDSVPEGVSRGFTALIPSFVVA
                     FFVIFLNGVLVALGTDIFKVIAIPFSFVGNLTNTWIGLVIIYLLTQALWVVGIHGANI
                     IFAFVSPIALANMSLNAAGERMIVAGEFSNMFVIAGGSGATLGLCIWLATRARSEQLS
                     AIGKAAIVPGIFNINEPLIFGLPIIYNPALAIPFMLAPIASMTVYYFSMKLNLINAVV
                     AQVPWPTPVGIGAFLGTADWRAIVVSIVCAVVAFLVYYPFIRAYDKQLLKEEAANA"
     gene            1754..3220
                     /locus_tag="AC1PJC_001529"
     CDS             1754..3220
                     /locus_tag="AC1PJC_001529"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HIP6620512.1"
                     /translation="MTKQFPKGFLWGGATAANQYEGGWNLGGRGPATSDTYIAVDPDK
                     RKDMSHFGKPVSRADVEFALADQEGLYPKRWGSDFYHRYKEDIALFAEMGFKTFRLSI
                     AWSRIFPKGDELEPNEEGLAFYDAVFDELNKYGIEPLVTLSHYEFPLHLALEYGGWKN
                     RKVIEFFVRYAETVFKRYQGKVKYWLTFNEINILGMVGYLSGGLLFEDGKNDLEAMYQ
                     AVHHQFIASSLATKAAHEIDPENKVGCMLARMENYAATCNPDDVLAALKKDQENLFYT
                     DVQVRGAYPSYMKRFFKENNIQVVFEPGDEAILKQYPVDFMSFSYYMTSITRALPDKD
                     KATAGNLILGEANPYLEASDWGWQIDPVGLRITLNKLYDRYQVPLFIVENGLGALDKV
                     EADGSIEDGYRIAYLEKHIQQMYEAIEDGVELMGYTPWGCIDLVSASTSEMSKRYGFI
                     YVDADDQGKGSFDRSRKASFYWYKDVIASNGANVLTEK"
     gene            3229..3846
                     /locus_tag="AC1PJC_001530"
     CDS             3229..3846
                     /locus_tag="AC1PJC_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HIP6620513.1"
                     /translation="MTKTIYLMRHGETLFNTQKRVQGWSDSPLTERGIAQAQAVGQYF
                     KEQGIVFTSAYSSTQERATDTLKLVTDAPYQQLKGLKEMNFGIFEAREEELLPKHRPG
                     ARSFEDILVPFGGEDIRAVGSRVKEAILSVAESDPADPILMVSHGAAIWGLVQVLEVT
                     FPPGVFLPNCAICQLTVENEQIRFEKLIDSAHDFKVYDFKQGGLV"
     gene            3843..4460
                     /locus_tag="AC1PJC_001531"
     CDS             3843..4460
                     /locus_tag="AC1PJC_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HIP6620514.1"
                     /translation="MNYLYLMRHGQTRFNQQGRIQGACDSPLTELGREQALAAHQYFQ
                     EQGIEFDKIYSSTQERACDTAELVTGRIDYTRLKGLKEQDFGAFEGQQEYLNPPLQGD
                     IGYGDYFVTFGGESYQDVRQRMVETIGGIMEEADNQSVLVVSHGAAIAQFFRQVLTDY
                     PRVRMRNCAILTFTYEDGHYDLQSIVDPVNKETLYQKEGKEKEKK"
     gene            4457..5896
                     /locus_tag="AC1PJC_001532"
     CDS             4457..5896
                     /locus_tag="AC1PJC_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HIP6620515.1"
                     /translation="MTVTKVFPKGFLWGGATAANQCEGAYDVDGRGLANVDVVPIGED
                     RAAIITGRKKMFDFEDGYFYPAKESIDMYHHFKEDIALFGEMGFKTYRLSIAWSRIFP
                     KGDELEPNEKGLQFYEDLFKECHKYGIEPLVTITHFDCPMHLIENYGGWRNRKMLEFY
                     ERLCRTLFTRYKGLVKYWLTFNEINMILHAPFMGAGLYFEEGENVEQVKYQAAHHELV
                     ASAIATKLAHEIDPENKVGCMLAAGQYYPHTCHPRDVWEALQEDRENYFFIDVQARGY
                     YPNYAKKKWERAGIEIEMTDQDLALLKEHTVDFISFSYYSSRVASGDPVEKEKTAGNI
                     FASIKNPYLDASEWGWQIDPLGFRITINSIWDRYQKPLFVVENGLGAVDTPDENGYVE
                     DDYRIDYLRQHVLAMRDAIVEDGVELLGYTTWGCIDLVSAGTGEMKKRYGFIYVDRDN
                     EGNGTLKRSKKKSFEWYKKVIATNGADVG"
     gene            5980..6969
                     /locus_tag="AC1PJC_001533"
     CDS             5980..6969
                     /locus_tag="AC1PJC_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014677692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase"
                     /protein_id="HIP6620516.1"
                     /translation="MKYIVNNSNDPAYNIALEAYAFKELTDIDEIFILWINEPAIIIG
                     KHQNAIEEINKEFTDEKGIHVVRRLSGGGAVYHDLNNLNYTIISNKSEEGAFDFKTFS
                     KPVIDTLATLGVEANFTGRNDLEIDGKKICGNAQAYAKGRMMHHGCLLFDVDMSVLAS
                     ALKVSKDKIESKGVKSVRARVTNINNELPEKMTVLEFKDAILNQMKQEYPDMDEYVLS
                     EDDLARIQEIRDTQFATWDWTYGQTPEYTVERSVRYPAGKITTYIKAEKSVIESIKIY
                     GDFFGIGDVSDIEDLLVGTRYEYADVLAKLQEIDTTHYFSRMTTEEVAKAIVA"
     gene            7141..7431
                     /gene="rpsF"
                     /locus_tag="AC1PJC_001534"
     CDS             7141..7431
                     /gene="rpsF"
                     /locus_tag="AC1PJC_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018030687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HIP6620517.1"
                     /translation="MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATIVESKAWE
                     KRRLAYEIKDFREGLYHIVNVEANNDEALKEFDRLSKINGDILRHMIVKLDA"
     gene            7443..7937
                     /locus_tag="AC1PJC_001535"
     CDS             7443..7937
                     /locus_tag="AC1PJC_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HIP6620518.1"
                     /translation="MINNVVLVGRMTRDAELRYTPSNQAVATFTLAVNRNFKNQNGER
                     EADFINVVIWRQQAENLANWAKKGALIGVTGRIQTRSYDNQQGQRVYVTEVVAESFQL
                     LESRTAREGQGGGYSAGNSFAGGNDYNSPYQAPAQSTPNFAREESPFGASNPMDISDD
                     DLPF"
     gene            7970..8209
                     /gene="rpsR"
                     /locus_tag="AC1PJC_001536"
     CDS             7970..8209
                     /gene="rpsR"
                     /locus_tag="AC1PJC_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002983142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HIP6620519.1"
                     /translation="MAQQRRGGFKRRKKVDYIAANKIEYVDYKDTELLSRFISERGKI
                     LPRRVTGTSAKNQRKVTTAIKRARVMALLPFVNED"
     gene            complement(8650..9306)
                     /locus_tag="AC1PJC_001537"
     CDS             complement(8650..9306)
                     /locus_tag="AC1PJC_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1129 domain-containing protein"
                     /protein_id="HIP6620520.1"
                     /translation="MSFTEINGLTKKNQEFIHIATNQLIKDGKSDSEIKELLEEILPT
                     IIEKQKTGVTARNLYGAPSEWAASKTISEQEKKDQVEYNENPWLMWLDSSLFMLAIIA
                     GINGLMNLFGQGAQYGLLTLFVIGFGVGAGMYLMYHFVYREQIKTGQRPKLLKAIAFL
                     GLATLAWSVVFILAALIPAAFNPVLPPLVTILIGAAAFGARYLLKKKYNIRNAMSPVQ
                     "
     gene            complement(9322..10266)
                     /locus_tag="AC1PJC_001538"
     CDS             complement(9322..10266)
                     /locus_tag="AC1PJC_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004250490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HIP6620521.1"
                     /translation="MKQIFLSTMTDLEEIQTFEPGAWINLVNPSQSESMEVAEHYKID
                     IADLRAPLDAEESSRITVEDDYTLILVDVPILEERNNKTYYITIPLGIILTDDAIITT
                     CLEPLPLFEQFIHRRLRNFFTFMKSRFVFQILYRNAQLYLSALRTIDRKSEEIEKQLH
                     EATRNEELIVLMELEKTIVYFKASLKTNERLVKKLASSSRLLRKYEEDEDLLEDTLVE
                     TQQAIEMADIYGSILNSMTHAFASIISNNQNTIMKTLALVTIVLSIPTMVFSAYGMNF
                     KDNIIPFNDIPYAFWWIILFAFAISLSLTFYFIRKRWF"
     gene            10557..13382
                     /gene="uvrA"
                     /locus_tag="AC1PJC_001539"
     CDS             10557..13382
                     /gene="uvrA"
                     /locus_tag="AC1PJC_001539"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003037804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HIP6620522.1"
                     /translation="MQENIVIHGARAHNLKNIDVTIPREKLVVVTGLSGSGKSSLAFD
                     TLYAEGQRRYVESLSAYARQFLGNMDKPDVDSIEGLSPAISIDQKTTSRNPRSTVGTA
                     TEINDYLRLLYARVGVPYCINGHGAIAASSVEQIVDEVLELPERQRLQILAPIVRKKK
                     GQHKTIFEKVQKDGYVRVRVNGDVYDVSEVPELSKSKAHNIEVVVDRIVIKEGIRSRL
                     FDSIEAALRIADGYVIIDTMDEKEMLFSEYYACPVCGFTVPELEPRLFSFNAPFGSCS
                     DCDGLGMKLEVDTDLIVPDASKTLREGALAPWNPISSNYYPQMLEQAMNHFGVDMDKP
                     FEELTDEEKHLIFNGSDGKEFHFHYENEFGGVRDIDIPFEGLITNINRRYRETNSDYT
                     RTVMKTYMNELTCGTCHGYRLNDQALSVKVGGEQGLHIGQLSDLSVADHLQVIEHLTL
                     SENEATIATPIVKEIKDRLSFLNNVGLNYLTLSRAAGTLSGGESQRIRLATQIGSNLS
                     GVLYILDEPSIGLHQRDNDRLIASLKKMRDLGNTLIVVEHDEDTMREADWLIDIGPGA
                     GVFGGEIVASGTPAQVAKNKKSITGQYLSGKREIPVPLERRVGNGRFLEVTGAKENNL
                     QDVTVRFPLGKFVAVTGVSGSGKSTLVNSILKKAIAQKLNRNSDKPGKFKSISGIEHL
                     DRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNEAKIRGYKKGRFSFNVKGGRC
                     EACSGDGIIKIEMHFLPDVFVPCEVCHGHRYNSETLEVHYKEKNIAQVLDMTVNDAVE
                     FFKHIPKIERKLRTIQDVGLGYVTLGQPATTLSGGEAQRMKLASELHKRSTGKSLYIL
                     DEPTTGLHTEDIAQLLKVLARFVDDGNTVLVIEHNLDVIKTADHIIDMGPEGGVGGGT
                     VVATGTPEEVAENPASFTGQYLKMKLK"
     gene            complement(13412..>13580)
                     /locus_tag="AC1PJC_001540"
     CDS             complement(13412..>13580)
                     /locus_tag="AC1PJC_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YlcI/YnfO family protein"
                     /protein_id="HIP6620523.1"
                     /translation="FKLKSDKKETEIKTIRFPSELVDRIEEAIVKKDVSFSSFVIQAC
                     DYALNNMDKEQ"
BASE COUNT         3790 a         2773 c         3211 g         3806 t
ORIGIN      
        1 ggaagaacaa aaagggttct ttggactatt agataaatat ctgatgggac caatgggtaa
       61 actggcatct tacaaagttg tacgtgccat cacagctgca ggtatggctg ccgtaccatt
      121 tacgattgtt ggttcgatgt tcttggtttt cagtatctta ccacaggcat tttcattctg
      181 gccaatcgtt tcagatattt ttgcggcatc ttttgataaa tttaccccac tctatatggt
      241 tgccaatact gctactatgg gggtgctatc actttatttt gcacttgcta ttggatatga
      301 attgacaaaa atttacgctg aggaagaaga acttaatttg actccgctta atggggcgct
      361 cttatccctc tttgctttca tcatgaccgt tcctcaaatt atttttgaag aaggcgcgat
      421 gtcggcagtc agctctcttg aagaaggcgc agtaattgtt gatggttggg caatgggtgg
      481 tggcgtaaca cgctttggta caacaggtat atttacggca atcatcatgg ctgttgcggc
      541 agttctgcta tatcggatgt gcgtgaaaaa taattgggtt atcaaaatgc ccgattcagt
      601 accagagggt gtatcacgcg gatttacagc tttgattcct tcatttgtcg tagccttctt
      661 tgtaattttc ttgaacggtg tattggttgc gcttggtact gatatattta aagttattgc
      721 aattccattt agctttgttg gaaatttaac aaatacttgg attggtttag ttattatcta
      781 cttgttgact caggcacttt gggtagtagg tattcacggt gcaaatatca tctttgcttt
      841 tgttagtcca attgcacttg caaatatgtc tcttaatgca gctggtgaac gaatgattgt
      901 tgcaggggag ttctcaaata tgtttgtcat tgcaggtggt tctggtgcaa cacttgggct
      961 atgtatttgg ttagctactc gtgctcgttc tgaacaattg agtgcgattg gtaaagcagc
     1021 aattgttccg ggtattttta atatcaatga accattaatt ttcggtttac caattattta
     1081 taatcctgct ctagcaatac catttatgct tgcaccaatt gcatctatga cggtatatta
     1141 cttctctatg aagttgaatc ttatcaatgc agttgttgct caagtaccat ggccaactcc
     1201 agttggtatt ggtgccttcc ttggtacagc tgactggcgt gcaattgttg tttcaattgt
     1261 ttgtgcagtt gttgccttcc ttgtttacta tccattcatt cgtgcatacg ataaacagtt
     1321 gctaaaagaa gaagcggcaa atgcttaaac tagagaaact ccttgacttc ttctaagtcc
     1381 aaggagtttt tctataagag aatatcagga gacattgtta gataaacata agatagtatc
     1441 atatttgctt tcttctttct aaatcagagg agctgaggta gggcaagaga agaagatttt
     1501 ttatagctga cttgatgaag cgactatcaa tacatatgga ggcttaaaaa tatctctact
     1561 acttttgcta atactgatcg agagaaaacc tctcccttgt tccaagtttt aattgggata
     1621 ttatctaatg ttttaagaat agtgataatt ggaaatagca tagaatagta tcagtttggc
     1681 atattatcac gtaggaatga agggggttct tttgctatta tatagctaat aaagtcagaa
     1741 ggagtattgt gctatgacaa aacaatttcc aaaaggattt ctttggggcg gtgcaacagc
     1801 ggccaaccaa tatgaaggtg gttggaattt gggaggtcgt ggtccagcca cttccgatac
     1861 ctatatagcg gtcgatccag ataagcggaa ggatatgagt cactttggta agcctgtctc
     1921 gcgggctgat gtggaatttg ccttggcaga tcaagaagga ctctacccaa aacgttgggg
     1981 ttctgatttc tatcatcgct acaaggaaga catcgccctc tttgcagaaa tgggcttcaa
     2041 gaccttccgc ttgtcgattg cctggtctcg tatttttcca aaaggagacg agttagaacc
     2101 gaatgaagaa ggactggcct tttatgatgc ggtcttcgat gagctgaata aatatggtat
     2161 cgagccactg gtgaccctat ctcactatga atttcctctt catcttgctc tagaatacgg
     2221 tggctggaaa aaccgtaagg tcatagagtt ctttgttcgc tatgccgaga cagtattcaa
     2281 acgctatcag ggtaaagtta agtattggct gacttttaat gagatcaata ttttgggcat
     2341 ggttggttat ctatcaggcg gtcttctctt cgaagacgga aagaatgacc tagaagccat
     2401 gtaccaagca gttcaccatc agtttatcgc ttctagtttg gcaacaaaag ctgcccatga
     2461 aattgaccca gaaaacaagg ttggttgcat gctggcacgg atggagaact atgcagccac
     2521 ctgcaatcca gacgatgtct tggcggcctt gaaaaaagac caggaaaatc tcttctatac
     2581 agatgtgcag gtgcgtggag cctacccaag ttatatgaaa cgcttcttca aagaaaacaa
     2641 tatccaggtc gtgttcgagc cgggagacga agcgattttg aaacaatatc ctgttgattt
     2701 catgagtttt tcttactata tgacatccat cacccgtgct cttccagaca aggacaaggc
     2761 aacggcaggt aatttgatac taggagaggc caatccttat ctggaagcgt cggactgggg
     2821 ctggcagata gaccctgtcg gacttcgtat caccctcaac aagctttatg accgttacca
     2881 agttcccctc ttcatcgtgg aaaatggtct gggagccttg gataaggtgg aggcagacgg
     2941 cagtattgag gacggctacc gtattgccta cctagaaaaa cacatccagc aaatgtatga
     3001 agctattgaa gatggtgtgg aactcatggg ctatacccct tggggctgta tcgacctagt
     3061 ttctgcttct accagtgaaa tgtccaaacg ctacggcttt atctatgtgg atgcggacga
     3121 tcaaggaaag ggcagttttg accgttcacg gaaggcatca ttctactggt ataaagatgt
     3181 cattgccagc aatggagcca atgtattgac agaaaaatag gaggtcttat gacaaaaacg
     3241 atttatctta tgcgtcacgg tgaaaccctc tttaatacgc aaaaacgagt gcaggggtgg
     3301 tcggattctc ccttgacaga acgtggtatc gctcaggccc aagccgttgg tcagtatttt
     3361 aaggagcagg gaatcgtctt taccagtgcc tattcttcca cgcaagagag agctactgat
     3421 acactaaaat tagtcacgga tgctccctac caacagctca aggggctcaa ggagatgaac
     3481 ttcgggattt tcgaagccag ggaggaagaa ttgctcccca agcatcgtcc tggagctcgc
     3541 tctttcgaag acatcttggt tccatttgga ggcgaggata ttcgagcagt tggaagtcgt
     3601 gtcaaagaag cgattctctc tgtcgcggaa agcgatccag ctgatccaat cctcatggtc
     3661 agtcatggtg cagccatttg gggattggtg caggttttgg aggtcacctt cccaccaggc
     3721 gtcttcctgc ccaactgtgc catttgccag ctgactgttg aaaatgagca aatacgattt
     3781 gaaaaactga ttgattccgc acatgatttt aaggtttatg attttaagca aggaggttta
     3841 gtatgaacta tctttactta atgcggcatg gacaaactcg gtttaatcaa caaggtcgga
     3901 ttcaaggggc ctgtgattct cccctgacag aactgggaag agagcaagca ctagctgctc
     3961 accagtattt tcaagagcaa gggattgagt tcgataaaat ctattcttca acccaagaac
     4021 gtgcctgtga cacagctgaa ttggtcacag ggaggataga ctatactcgc ttgaaaggct
     4081 tgaaagaaca ggattttgga gctttcgagg gtcaacagga atatcttaat ccccctctcc
     4141 aaggagatat tggctacggt gattattttg tcacctttgg aggagagtct tatcaagatg
     4201 tccgacaacg aatggtcgaa accattgggg gcatcatgga agaagcagac aatcaatctg
     4261 ttttagtagt tagccatgga gccgccattg ctcaattttt caggcaggta ttgacagatt
     4321 atccgcgagt gcggatgcgg aattgtgcca tactgacttt tacttatgaa gacggtcact
     4381 acgatttgca aagcattgtg gatcccgtta ataaagaaac tctctatcaa aaagaaggaa
     4441 aggaaaagga gaaaaaatga cagtaacaaa agtatttcca aaaggatttt tatggggtgg
     4501 tgcaacagca gccaaccaat gtgaaggagc ttacgatgta gacggacgtg gtcttgccaa
     4561 cgtcgatgtc gtgccgattg gcgaagaccg agctgccatt atcactggtc gtaagaagat
     4621 gtttgacttt gaggacggtt atttctatcc agccaaggag tctattgata tgtatcatca
     4681 cttcaaggag gatattgctc tctttggtga aatgggcttt aagacctatc gtctttcaat
     4741 cgcttggtcc cgtattttcc ctaagggaga cgaattggag cctaatgaaa aaggcctgca
     4801 attttacgag gacttattca aggaatgtca caagtatggt attgagccct tggtgaccat
     4861 cacccacttt gactgcccga tgcacttgat tgagaactac ggtggctggc gaaatcgtaa
     4921 aatgcttgaa ttttacgaac gcctttgccg taccctcttc acacgctaca agggcttggt
     4981 caaatactgg ctgaccttca acgaaatcaa catgattctt catgcaccat ttatgggggc
     5041 aggtctctat tttgaagaag gtgaaaatgt ggagcaggtc aaataccagg cagcccacca
     5101 cgagcttgtt gcttctgcta ttgctactaa attagcccat gaaatcgatc cggaaaacaa
     5161 ggtcggttgt atgttggctg caggtcaata ctacccacac acctgccacc cacgtgatgt
     5221 atgggaagct ctgcaagaag accgtgagaa ctatttcttt atcgatgttc aggcacgtgg
     5281 ctattatcca aactatgcca agaagaagtg ggagcgtgca ggtatcgaga ttgaaatgac
     5341 cgaccaagac ctagcactcc tgaaagagca tacggtggac tttatttcct tctcttacta
     5401 ctctagccgt gtggcttctg gagatcctgt agagaaggaa aaaacagcag gcaatatctt
     5461 tgcttccatt aaaaatcctt acctagacgc atcagaatgg ggctggcaga ttgacccgct
     5521 cggttttcgc attaccatca attccatatg ggatcgctat caaaaaccac tctttgtggt
     5581 tgaaaatggt ctgggagcag tcgacacgcc agatgaaaac ggctatgtgg aagacgacta
     5641 ccgtattgac tatctccgcc aacatgtcct ggcaatgaga gatgctattg tagaagacgg
     5701 cgttgaactc ttgggataca ctacttgggg ctgtattgac ctagtgtctg ctggaacggg
     5761 cgaaatgaaa aaacgctacg gcttcattta cgtcgatcgt gacaatgaag gaaatggaac
     5821 cctcaaacgc tctaagaaaa aatcatttga atggtataag aaagtcatcg ctacaaatgg
     5881 agctgatgtg ggataaaaca tgagagacag gtcttcggac ttgtcttttg ttatcgtttc
     5941 cactataata aaaattagtt aacaataaag gagttttgca tgaaatatat cgtaaataac
     6001 agcaatgacc cagcttataa cattgccctc gaagcctacg ctttcaagga attaacagat
     6061 attgacgaaa tttttattct ctggatcaat gagcctgcca tcattatcgg taagcaccag
     6121 aatgctattg aagaaatcaa caaggaattc acagacgaaa agggcatcca tgttgttcgc
     6181 cgtctgtcag gtggtggagc ggtttaccat gatttaaaca atctcaacta caccattatt
     6241 tcaaataaat ctgaagaagg tgcatttgac tttaaaacct tctccaaacc tgtgattgat
     6301 acccttgcga cactgggtgt agaggccaat ttcaccggcc gcaatgacct ggaaatcgac
     6361 ggaaagaaaa tctgtggtaa cgcccaagcc tatgccaaag gtcgcatgat gcaccacggt
     6421 tgcttgctct ttgatgtgga tatgtcagtc ctcgcaagtg ccctcaaggt cagcaaggac
     6481 aagattgagt ccaagggtgt caagtcagtc cgtgcccgcg tgaccaacat caacaacgaa
     6541 ttgccagaga agatgaccgt tctggagttc aaggacgcca tcctcaacca gatgaagcaa
     6601 gaatacccag acatggacga gtatgtcttg tcagaagatg acttggctcg tatccaagaa
     6661 atccgtgata cccagtttgc gacttgggat tggacctacg gtcaaacacc cgaatacact
     6721 gtggagcgca gtgtgcgtta cccagctggt aaaatcacaa cctacatcaa ggctgaaaaa
     6781 tcagtcatcg aatctatcaa gatttacgga gacttcttcg gtatcggtga tgtatcggat
     6841 attgaagact tgctggtcgg tactcgttac gagtatgcag atgtgcttgc caaattgcaa
     6901 gaaatcgaca ccacgcacta tttctcacgc atgacaacag aagaagtagc aaaagcgatt
     6961 gtagcttaat ccatagggct gccctttgtt tgggcagtct ttattttttg tgaaaatgtt
     7021 ttcggcaaac tgttttcact tgcacatttt ctatattatg gtataattat cttctgtgag
     7081 tatccctcac ttactcgtgg ctagaccatg agtcattaga ccaaaaggag gaacatatca
     7141 atggctaaat acgaaattct ttatattatt cgtccaaaca ttgaagaaga agctaaaaac
     7201 gctttggtag cacgctttga ctctatcttg actgacaacg gtgcaactat cgttgaatca
     7261 aaagcatggg aaaaacgtcg ccttgcatac gaaatcaaag atttccgcga aggtttgtac
     7321 cacatcgtta acgttgaagc taacaacgat gaagctctta aagagtttga ccgtttgtca
     7381 aaaatcaacg gcgacattct tcgtcacatg attgtcaaac ttgacgcgta agaaggtgtt
     7441 gtatgattaa taatgtagta ttggttggtc gtatgacccg tgatgcagaa cttcgttata
     7501 ctccgtctaa tcaagctgtt gcgactttta ctttggcggt taaccgcaat tttaaaaatc
     7561 aaaacggtga gcgtgaagcg gactttatca acgtagtcat ttggcgtcaa caagctgaga
     7621 atttggcgaa ttgggctaag aaaggtgctc tgattggtgt tacaggtcgt atccagacac
     7681 gtagctatga caatcagcaa gggcaacgtg tctacgttac tgaggtagtt gcagaaagtt
     7741 tccaactctt ggaaagccgt actgcccgtg aaggtcaagg tggaggctat tcagctggca
     7801 actcgtttgc tggaggaaat gactacaact caccttatca agcgcctgca caatctacac
     7861 caaacttcgc tcgagaagaa agtccatttg gagcaagtaa tccaatggat atatcagacg
     7921 atgaccttcc attctaggtc agaaactaat aatataaagg agaacacaca tggctcaaca
     7981 acgtcgtggc ggtttcaaac gccgtaaaaa agttgactat atcgcagcta acaaaattga
     8041 atatgttgat tacaaagata ctgagcttct tagccgtttc atttctgaac gtggaaaaat
     8101 ccttccacgc cgtgtaactg gaacttcagc taaaaaccaa cgtaaagtaa caacagctat
     8161 caagcgtgct cgcgttatgg ctcttttacc attcgtaaac gaagattaaa aaaatggtcc
     8221 agtggaccat tttttcatga ggatgaaaat aagaaagcaa attgagaccc cgacgggtct
     8281 ttttagcttg cgcccaagaa actggaaagg tgcagcggag agaatggact gttttttcat
     8341 gagcatgaaa ataagaaagc gaattgagac cccgacgggt ctttttagct tgcgcccaag
     8401 aaactggaaa ggcgcaacgg cgagagtgga ccattttttc atgaactcga aattaagaaa
     8461 gcgaattaag cctttgaatg gactgtttca acccgagcca agaagttaga aagcgaggca
     8521 cagtctgggg atagactgtt tcagcagatt acatagacaa gtgacagcgg ataaggttct
     8581 cgggcgattt gatagctgaa ctgtatagat aaacaaaagc gactggaata ttccaatcgc
     8641 tttgttttat tattgaactg gggacatggc attgcgaatg ttatatttct ttttcaagag
     8701 gtagcgtgca ccgaaagcag cagctccgat aagaatagta acaagcggag gaagaaccgg
     8761 gttaaatgcg gccggaatca gtgctgccag aatgaaaacg actgaccaag ccagcgtagc
     8821 aagtccgaga aaagcgatag ctttcagcaa tttaggacgt tgcccagttt taatttgttc
     8881 tctgtaaacg aaatggtaca tcaagtacat ccctgcacca acaccgaaac cgatgacaaa
     8941 taaggttaat agcccgtact gtgcaccttg accaaaaaga ttcatcaaac cattgatacc
     9001 agcaataatt gcaagcatga aaaggctaga atctagccac atcaaccatg gattttcatt
     9061 gtattccact tggtctttct tttcctgttc agaaattgtc ttactagcag cccactcact
     9121 tggtgctcca tagagattgc gggcagtcac accagttttt tgcttttcaa tgatagttgg
     9181 taaaatttct tccaagagtt ctttgatttc gctatcagac tttccatctt taatcagttg
     9241 gttggtcgca atatggataa attcttggtt cttttttgtt aatccgttga tttctgtaaa
     9301 tgacatgtta atctccttag tttaaaacca tctcttacgg atgaagtaga aggtgagtga
     9361 taggctgatt gcaaatgcga agaggataat ccaccaaaaa gcatagggaa tatcgttaaa
     9421 aggaatgatg ttgtccttaa agttcatacc gtatgcagag aagaccatgg ttgggataga
     9481 gagaacgatt gtcactaatg ccaaggtttt catgatggta ttctggttgt tagaaatgat
     9541 agaagcaaag gcatgggtca tagagttcag gatggaacca tagatgtctg ccatctcaat
     9601 ggcctgttgg gtttcgacca aggtatcttc aagcaaatcc tcatcctctt catacttacg
     9661 gagtagacgt gaggaactag caagtttttt gaccaaacgc tcattggttt tgagggaagc
     9721 cttgaagtag acgatggttt tttccaactc catgagtaca attaattctt catttcgagt
     9781 ggcctcatgg agttgcttct caatctcttc gctctttctg tcaatggtcc gtagggctga
     9841 caagtagagt tgagcattgc ggtagagaat ttggaaaacg aaacgagact tcatgaaagt
     9901 gaagaaattc cgtagacgac gatggataaa ctgctcaaac agtggcaatg gttccaaaca
     9961 agtcgtgata atcgcatcat ctgttagaat aattcccaaa ggaatagtaa tataatatgt
    10021 cttgttgttt cgttcttcga gaattgggac gtcgaccagg atgagcgtat agtcatcttc
    10081 gacggtgata cgagaggatt cttccgcatc gagcggtgct cgcaggtcag cgatgtcaat
    10141 tttatagtgc tcagccactt ccatagactc gctctgggag gggttgacca aattaatcca
    10201 agcccctggt tcaaaggttt ggatttcttc taaatcagtc atggttgata gaaaaatttg
    10261 tttcatatct ttgccctcct tttatctttg ttgcgttaac gcaacctcta ttataccaaa
    10321 aaatgtgcag tttcggaaag gttttatata gaaatgtgat ataatatgta gacatttaag
    10381 cgaataagtt gtacggactt ttccttgttc cgtataccat agcttatagc ctcttaagaa
    10441 aggaattgaa cacgggctaa atgcagtgtc aaaaagataa acttccttgt gtctttcagc
    10501 cacatcgtca gtttcctatt ttgactgtgc atttaacgcc ctttgtatct taaattatgc
    10561 aagaaaatat tgtgattcat ggggcgcgtg cccataattt aaaaaatatt gatgtgacca
    10621 ttccgcgtga gaagttggtg gtggtgactg gtttgtcggg gtctggtaag tcgagtttgg
    10681 cttttgatac gctgtatgcc gaaggccaac gtcgctatgt ggaaagtttg tctgcctatg
    10741 ctcgtcagtt cttgggcaac atggacaagc ctgatgtgga ttccatagag ggtctcagcc
    10801 ctgctatttc catcgaccaa aaaacgacgt cgcggaatcc gcgttcgaca gtcggtacag
    10861 cgacggaaat caatgactat ctccgcctgc tctatgctcg agttggggtg ccttactgta
    10921 tcaacgggca tggtgcgatt gcggcttctt cggtggagca gatcgtcgat gaggtcttgg
    10981 aattgccaga acgccagcgt ttgcagattc tagctccgat tgttcgtaag aaaaaagggc
    11041 aacacaagac catttttgag aaagtgcaga aggacggcta tgttcgggtc cgtgtcaatg
    11101 gcgatgtcta tgatgtgtct gaagtgcctg agttgtccaa gagcaaggct cataatattg
    11161 aagtcgttgt cgatcgaatt gttataaaag aaggtattcg ctctcggctc tttgactcga
    11221 ttgaggcggc cctgcggatt gcggacggct atgtcatcat tgacaccatg gatgagaagg
    11281 aaatgctttt ctctgagtac tatgcctgcc cagtttgtgg ttttacggta ccagagttgg
    11341 agcctcgcct cttctctttc aatgcgcctt ttgggtcttg tagcgattgt gacggtttgg
    11401 gcatgaagct ggaagtggat acggatttga ttgttccgga tgccagcaag accttgcgtg
    11461 agggtgcctt ggctccgtgg aatccaatct cttctaacta ctaccctcag atgctggagc
    11521 aggccatgaa ccactttggt gtggatatgg acaagccttt cgaggaattg acggatgagg
    11581 agaagcacct gattttcaac ggctcggacg gcaaagaatt tcatttccat tatgaaaatg
    11641 agttcggtgg ggtgcgtgat atcgatattc cctttgaagg cttgattacc aacatcaacc
    11701 gtcgttaccg tgaaaccaac agtgattata cgcggactgt tatgaagact tacatgaatg
    11761 agctgacctg tgggacctgc cacggctatc gcctcaatga ccaagccctg tctgtcaaag
    11821 tcggtggcga gcagggactt catatcggac aattatcaga cttgtccgta gcggatcatt
    11881 tgcaagttat tgaacatctg accttgtctg aaaatgaagc gacgattgcg acgcccattg
    11941 tcaaggaaat caaggaccgc ctgtccttcc ttaataacgt tggtctcaac tatctgactc
    12001 tttcacgagc tgcgggaaca ttgtctggtg gtgagagcca gcggattcgt ttggcgaccc
    12061 agattggctc caacctgtca ggtgtcctct atattctgga tgagccgtcg attggtctgc
    12121 accagcggga caatgatcgt ctcattgcca gcctgaaaaa gatgcgtgat ttgggcaata
    12181 ctctgattgt ggtagaacac gatgaggaca ccatgcgtga agcggactgg ttgattgaca
    12241 tcggtccagg tgcgggtgtc tttggcggag aaatcgtggc ttctggaacg cctgcccaag
    12301 tggctaaaaa caagaaatcc attacaggcc agtacctgtc tggtaaacgt gaaattccag
    12361 ttcctttgga acgtcgtgtt gggaatggtc gtttcctaga ggtgacaggt gccaaggaaa
    12421 acaacctgca agatgtgact gttcgtttcc cgctcggaaa atttgtggcg gtgacagggg
    12481 tgtctggctc aggcaaatca accctggtca attccatttt gaaaaaagct attgctcaga
    12541 aactcaatcg caattcggac aagccaggca agttcaagtc catttcagga attgaacact
    12601 tggaccgcct gattgatatt gaccaaagcc cgattggacg gacaccacgt tctaacccag
    12661 ctacctacac aggtgtcttt gacgatattc gggatttgtt tgcccagacc aatgaagcca
    12721 agattcgtgg ctacaagaag ggccgtttct cttttaacgt caaaggtgga cggtgtgagg
    12781 cttgttctgg tgatgggatt atcaagattg aaatgcactt cctgcccgat gtctttgtac
    12841 cttgtgaagt ctgtcatgga caccgttata attctgaaac cttggaagta cactacaagg
    12901 agaaaaatat cgctcaggtc cttgatatga cggtcaatga cgcggtcgag ttcttcaagc
    12961 atattccaaa aattgagcgg aaacttcgta ctattcaaga tgtaggtttg ggctacgtta
    13021 ctctaggtca gccagcaacg accctatcag gtggggaagc ccagcgtatg aagttggctt
    13081 ctgaactcca caagcggtca actggtaaat ccttgtatat cttggatgag ccgacgacag
    13141 gtctgcatac ggaggacatt gcccagttgc tcaaggtctt ggctcgcttt gttgatgatg
    13201 gcaataccgt gctggtcatc gagcacaatc tggatgtcat caagacagcc gaccacatta
    13261 tcgacatggg gccagaaggc ggcgtcggtg gcggtactgt tgtcgcgaca ggaacaccag
    13321 aagaagtggc ggagaaccca gccagcttta caggccagta tctgaaaatg aagttgaaat
    13381 aagcaagtaa aaaagagcca tcggctcttt tttactgttc cttatccata ttattcaagg
    13441 catagtcaca agcctgaatg acaaagcttg aaaaactgac atcttttttg acgattgctt
    13501 cttcaatcct atctaccaac tctgacggaa atcgaatggt tttgatttct gtttcttttt
    13561 tatctgattt taatttaaat
//
LOCUS       DBNFCX010000061        13521 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.061, whole genome shotgun sequence.
ACCESSION   DBNFCX010000061 DBNFCX010000000
VERSION     DBNFCX010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 13521)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13521)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13521
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.061"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            17..1519
                     /locus_tag="AC1PJC_001541"
     CDS             17..1519
                     /locus_tag="AC1PJC_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YfcC family protein"
                     /protein_id="HIP6620524.1"
                     /translation="MSEKVKKGFKLPSSYTILMLIIAFMAVMTWIIPAGQYQVDEAGR
                     LVAGTYEKVAQNPQGIYDVFMAPVRAMLGHGATEAAINVAFFIIMVGAFLGVVNETGA
                     LDVGIASIVKRFKGREKMLIYILMPLFALGGSTYGMGEETMAFFPLLVPVMMAVGFDS
                     ITGVAIILLGSQIGCLASTVNPFATVVASDAAGVSVADGMIWRLVFFVVILLMGVLFV
                     ANYAEKVKNDPTKSLVYKQREADMQHFNVAATQEVNAELSPAQKRVLWVFVLTFVLMI
                     CSFIPWEDLGVTIFTQFNEWLIGLPFIGQVIGSSTAALGTWYFPEGAMLFGIAGIVVG
                     LVYGMSEERLVKSFMFGAADIFSVALICAIARGIQVIMNDGMITATILHMGEEGLQGL
                     SSQVFIILTYLFYLPMSFLIPSSSGLAGASMGIMAPLGEFVNVPASLVITAFQAASGL
                     LNLVAPTSGIVMGALALGRVEIGTWYKFVGKLIVGIMIASIAILVIATFF"
     gene            1638..2978
                     /locus_tag="AC1PJC_001542"
     CDS             1638..2978
                     /locus_tag="AC1PJC_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase"
                     /protein_id="HIP6620525.1"
                     /translation="MRTSFIQSSHQEACIQAIQELVAFPSVLQEHQADTPFGQAIQDV
                     LEHTLALTEKMGFKTYLDPAGYYGYAEIGQGEELLAILCHLDVVPAGDLSQWQTPPFE
                     AVVEGDYIIGRGVQDDKGPSMAALFAVKALLDAGVQFNKRIRFIFGTDEETLWRCMNR
                     YNQLEEVATMGFAPDSSFPLTYAEKGLLQAKLHGPGHPCLSIEAGTAYNVVPAKASYS
                     GHLLAGVIAELDQLGFDYETKDDQVTVLGISRHAKDAAEGVNAIVRLAKALEHFENHP
                     ALDFIVNAVGEDATGFKLFGDVTDEPSGTLSFNIAGLTISAKKSEIRLDIRIPVTADK
                     EALVSTLQAKAQSCGLTYEEYDYLASLYVPLDSQLVSTLMSVYQDKTGDLTSEPISSG
                     GATFARTMPNCVAFGACFPDTEQTEHQENERMPLEDLYKTMDIYAEAVYRLAAE"
     gene            3349..7629
                     /locus_tag="AC1PJC_001543"
     CDS             3349..7629
                     /locus_tag="AC1PJC_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 16 glycosylhydrolase"
                     /protein_id="HIP6620526.1"
                     /translation="MKKETSKFTKKVILGQLLICTSFLVWAGQTVAAEEVSQGESVAI
                     NNDVPPTIEAKPLVEATPSTETEPSTPEEKQEEAKVVEKNVIEGKEPTTNSQHLMASE
                     LTTIPSVAIKNPEKATDGVSYGSSDDASNNTKIIAGEETGGADNGYSQWDHVYVQYDF
                     EKEVPVHTVNIYRNTYENAISTFKDVKVELSTSADFSPETTRVIFEQADVEETVTNKG
                     KPQVIQLLSPFDARYMRIWGRGHYIQNTNSSWKGYSNGVLFNEIEVLAQVEADESANE
                     NPQTELINLAELKKPYFYGKAPTNPEAINDGKFDENYTTQESKGMGAYLQYEFKNVYT
                     IEEIKVQLAPGTYSHFRVDLDDDYNAWNTYKTVYQASNLSVNEGEILTIAVPKGSKAR
                     YVRFTGESADGEALRYSEIQIMGHGKSYDEAAPEYLPPKSDYDTLVWSDEFDGDKIDE
                     SKWQIIDGMWNHAAIYNRKAVSIKKEGDKSYLSIRTTNHNTTDELIKAVGLDRYNDTK
                     LPEKVTWSSGRLESKDKYSFQFGRMAVRAKVNDSKGIWPAIWMLAQDETGHDEIDVLE
                     YLGQNPWEAWTTNHFGILAKNKESHGVPIKNYEAWSQEFHVYEVEWTPDVIKWYIDGK
                     FVFQTMRGKDRDGMHTRPMFPILETQVGDGWVGDVDYSKNMTKQDSEYLIDWVRVYQK
                     AGQDKVYFDNLDDATASDYTIKPSEKRGQLVSVSHGQAAHENKNNFYYGGQPRYETSR
                     LYADGQGENALIYKVNDPKALHLTTYYKTLEDYAVYNDKAWAKEGKSIRKHLVGAAEG
                     AIDFTVYSSVDGKTWNKETTSVVDNFVEATPAYARTTFDIRDIRRGTKYIKIVFPELS
                     GISYKLESGAEKAAVASDVQLAKVTFVAADPSAEPEKPIVDERKLSLSKVFSLDAGRK
                     YFSVDQLKEIVDLASYYGYTDLHLLVGNDGMRFLLDDMELTVGDKTYTSDAVKQALIN
                     GNNHYYNDPNGNYLTQAEMDELIAYAKASNVRLIPAVNSPGHMDAILEAMEELGIPSP
                     KFTYNGKTSARTVDLNNKEAIAFTKALIDKYAGYFSDKAKIFNIGLDEYANDATNASG
                     WRILQSQGDYGKFIQYANDLAAIVKKHGLEPMAFNDGIYYNHDTSSGTFDKDIIISFW
                     TGGWGGYDVASSKFLADKGHKILNTNDAWYYVIGREAEGWGWYNLDQGLRGIESTPLE
                     VVHKNENSEIPVIGSMVAVWADDPSKEYSYDSVHRLMYEFVMANPTYFLADYVDLHEE
                     ISKLPADLSDYSPESVANLKEVLDKIDWKLSKNNQAFVDGYLAEVKAAREALVPLPPL
                     VTTKGDSVKAEPLPVGQLPLITAKGKSVQAEPRPAFKGYLTPNYGPSVTPLSLVSKPS
                     SEQSNSKQAASQKKELPNTGAVDGLGFTLLGLIGLATASRRRKATDSK"
     gene            complement(7682..9202)
                     /locus_tag="AC1PJC_001544"
     CDS             complement(7682..9202)
                     /locus_tag="AC1PJC_001544"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620527.1"
                     /translation="MLDVHTLLTTLASSTNRSYARWKALLSYHPSQMALILEQLNESI
                     LDSIYDIRVIRLIERRAKSCRKASNRAYLLEWCKTRRAQFENKNDNRLLLALSIFIGI
                     AQFLSLLTLLISLTCLTGTTIELGDEQISFLLSNIWGSFLTLRVLNRLQKRRCSLDYE
                     PVFQKDFNRHLYILGGIIALCMIPSFIGAYLDIFEYHVFSLTSIFRGFAYALAIYLLF
                     QTTKTEFIPSKSRHNVTTIYLILFTLFTYLLSIFDYDYRFLFFIILWNQLSLLFNYKY
                     LGSPEVEEVVKPLRYLNKRVHPLISGTCLLLIHYSILTGFPIQYGFLGLTFFIAFMTF
                     LATYNAKLSLGDNHLKEALRDIPNFYFANQIIFYRLQYKNKLSFKIERFRCVPNYSEQ
                     NIQSWNELYLLITSIEHNGIYKTLSSRYFAQKIPLFINHLKKWQISYLVDDLESLLPV
                     LQQGEEIGWSKQNLKKFLLLYQQQLLRVDDAFLQQSTLIQWHLYQEYQSFEDAFKI"
     gene            complement(9206..10867)
                     /locus_tag="AC1PJC_001545"
     CDS             complement(9206..10867)
                     /locus_tag="AC1PJC_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018377580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HIP6620528.1"
                     /translation="MIIGIDLGTTNSLVATWRNNKVELIPNNLGDFLTPSVVGLSDNG
                     DIIVGKFAKERLMSHPHLTQSRFKRLMGTGKKLPLGDQMYLPEELSAFILKKLIEDAE
                     EFLGEKVDEIIVSVPAYFSDDQRAATKIAGHLAGVKIERIINEPSAAALALHHSREED
                     ATYMIIDFGGGTLDISIVDAFANVIEIVSVAGENHLGGEDFTQQIVEDFIQNLPYKKS
                     DLSDEVMGFLYQEAEKAKLALNKEDSVRMSVNINDSLHVYKLTKERYVEICRFLLAKM
                     NAPIQNALRDAQIHAEDLTDVILVGGSTKMKLIQDYLIFLLKRPISVKVDQDKAVAMG
                     CGIVTGIKKRDKGIKDVVLTDICPFTLGTAIVGNVFSPIIERNTTLPASYVERYWTNE
                     LGQQHVLFTIYQGENYQADTNLLLGSLDIPIPVNHEEHEAIDCRFSYDINGILDVDIT
                     VLSTGKVYNKTILRDRQQLSAEEILEKRAKLASLKIHPRDSEHYQLLRARAERLFRTL
                     LAEQRDYLMNCIQRYEKVIETQDAKRIAKANKIFENQLDGLEESW"
     gene            complement(10864..11850)
                     /locus_tag="AC1PJC_001546"
     CDS             complement(10864..11850)
                     /locus_tag="AC1PJC_001546"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HIP6620529.1"
                     /translation="MKSCWQELQIAATTDQRTIKLAYAERIKKVHPEEDPEGFKRLQH
                     AYKSALQYAKQARPKPKQTFTEFGEQNNLENQQSATSFDFFDDRNENKTEDISHSIFD
                     FSTFSHSEEIPEQDASEQTITANNQLFENTNFVDNIKIACKNSPYYHLLYQILISDEF
                     NFHIRDIEIRKQLIAELSQLTFYGEEFERKKVIEQCELLGLDELALYLSQDKQKQLED
                     QFNTDTESIAQAAEEYLAKLLSSLELVSDFYLLLKAFRSDNFRYFVANEQFCNKLTAH
                     LLNYYFFGPWEHRIELVQLCQNYGLNELAGYIYWIGLNNPETQKGLSTERLV"
     gene            complement(11931..12404)
                     /locus_tag="AC1PJC_001547"
     CDS             complement(11931..12404)
                     /locus_tag="AC1PJC_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine repressor"
                     /protein_id="HIP6620530.1"
                     /translation="MNKIESRHQLILSLIMEKKIHTQQELQELLEVNGVSVTQSTLSR
                     DIKMLNLVKVNEDDSSHYVINPIAPTRWEKRLRLYMEDALVMLKPIQHQVVLKTLPGL
                     ANSFGSILDAMEIPQIVATVCGDDVCLIICEDVEGAQACFEHLKQFTPPFFFSKL"
     gene            complement(12468..13496)
                     /gene="queA"
                     /locus_tag="AC1PJC_001548"
     CDS             complement(12468..13496)
                     /gene="queA"
                     /locus_tag="AC1PJC_001548"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HIP6620531.1"
                     /translation="MNTADFDFDLPEELIAQVPLEKRDSSKLLILDREKRSRVDSHFD
                     HIIDQLNPGDALVMNNTRVLPARLYGYKPETMGHVELLLLKNTQGDQWEVLAKPAKRL
                     KVGATVAFGDGRLNATIVEELEHGGRIVEFSYEGIFLEVLESLGEMPLPPYIHEKLED
                     RERYQTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDN
                     VDEHEMHSEFYNLSAEAAQTLNQVKDSGGRIIAVGTTSIRTLETIGNKFDGRLEAASG
                     WTNIFIKPGYTFRIVDAFSTNFHLPKSTLVMLVSAFAGREFTLDAYKHAVEERYRFFS
                     FGDAMFIQ"
BASE COUNT         4015 a         2459 c         2990 g         4057 t
ORIGIN      
        1 ataggaggtt tttgcgatga gcgaaaaagt gaaaaaaggc tttaaattgc cttcgtctta
       61 tacaatattg atgctcatta ttgcctttat ggcagtgatg acatggatta ttccagctgg
      121 tcagtatcag gttgatgaag ccggacgttt ggtggctggt acctatgaga aggttgctca
      181 aaatccacaa gggatttacg atgtttttat ggctccagtt cgtgccatgc ttggtcatgg
      241 tgcgactgaa gcagcgatta acgtagcatt cttcatcatc atggttggtg cctttcttgg
      301 tgtagttaac gaaacaggtg cacttgatgt agggattgct tctattgtaa aacgcttcaa
      361 aggtcgtgaa aaaatgttga tttacatcct catgcctttg tttgccttgg gaggctcaac
      421 ctatggtatg ggtgaagaaa caatggcttt cttcccgctc cttgttcctg ttatgatggc
      481 ggttggtttt gatagtatta ctggtgtagc catcatcttg ctgggttctc aaatcggctg
      541 tttggcttct actgtaaacc catttgcaac ggttgtagcc tctgatgcag caggtgtaag
      601 tgttgcggac ggtatgattt ggcgcttggt cttcttcgtt gttattctct tgatgggggt
      661 tctctttgta gccaactatg ctgagaaagt gaaaaacgat ccgactaagt ccttggttta
      721 caaacagcgt gaagcagata tgcaacactt taatgtcgca gcaactcaag aagtgaatgc
      781 agaattatca ccagctcaaa aacgtgttct ctgggtattt gtactaacat ttgttctcat
      841 gatttgtagc tttattccat gggaagattt gggtgtgact atctttacac aatttaatga
      901 gtggttgatt ggtcttccat tcatcggtca agtgattggt tcttcaacag ctgctcttgg
      961 tacttggtac ttcccagaag gagcaatgct ctttggtatc gcagggattg tagttggttt
     1021 agtttatggt atgagtgaag aacgtttggt aaaatccttc atgttcggtg cggctgatat
     1081 tttcagcgta gctttgattt gtgctatcgc gcgtggtatt caagtcatca tgaacgatgg
     1141 tatgattact gccactattc tccacatggg cgaagaagga ttgcaaggtt tgtcttcaca
     1201 agtattcatc attttgacct atctcttcta cctaccaatg tccttcttga ttccatcttc
     1261 atcaggtctt gcaggggctt ctatgggtat catggcacct cttggtgagt ttgtaaatgt
     1321 accagcgagc ttggttatca cagctttcca agctgcatca ggtctcttga acttggtagc
     1381 tccaacatca ggtattgtaa tgggagcctt ggcacttggt cgtgttgaaa ttggtacttg
     1441 gtataaattt gtaggtaagt taatcgtagg catcatgatt gcctccatag ctattttggt
     1501 cattgcgaca ttcttctaat cgaaattctg ggtcagattt tatcatgaat acagataaaa
     1561 tttggctcag tttttccttt tatgatagaa tagtgctaga aaatatatca tatcttatta
     1621 tgttgaaagg ggacacaatg agaacaagtt ttattcagtc atcgcatcag gaggcatgta
     1681 ttcaagccat ccaagaactg gttgcttttc cttctgtttt gcaagaacat caggcagata
     1741 cgccatttgg tcaagcgatt caggatgttc tggagcacac gttggctttg acggaaaaaa
     1801 tgggttttaa aacttattta gaccctgctg gttattatgg ctatgctgaa attgggcaag
     1861 gcgaagaatt attagcaatc ctttgccact tagatgtggt acctgctggt gatcttagtc
     1921 aatggcagac gccgcctttt gaggctgtgg tagagggaga ttatattatt ggacgcgggg
     1981 ttcaggatga taaaggtcct tcgatggcgg ccttatttgc agtaaaagca cttcttgatg
     2041 cgggagtcca atttaacaaa cggattcgtt tcatttttgg aacagatgaa gagaccttat
     2101 ggcggtgtat gaaccgctac aatcagttgg aagaagtagc aactatgggc tttgcaccag
     2161 attcttcctt ccctttgact tatgctgaaa aaggattact acaggccaaa ttgcatggtc
     2221 caggtcaccc ttgtctgagt atcgaagcgg gaactgccta taacgtagta cctgccaagg
     2281 caagctattc cggtcattta ttagccggag ttattgcgga gttagatcaa ttaggctttg
     2341 attatgaaac caaagatgat caagtaacgg ttcttggtat ttcgcggcac gccaaggatg
     2401 ctgctgaggg ggtcaatgcc attgttcgtt tggcaaaggc tttggaacat ttcgaaaatc
     2461 atccagcctt ggactttatc gtcaatgcag ttggtgaaga tgccacagga tttaagcttt
     2521 ttggtgatgt gaccgatgaa ccatcaggga cactcagttt caatattgca ggtctaacca
     2581 ttagcgcaaa aaaatcagaa attcgcttgg acattcgtat tcctgtcact gcggataaag
     2641 aagccctagt ttctacttta caagccaaag cgcaatcatg tggcttgacc tatgaagagt
     2701 atgactacct tgcttccttg tatgtgccat tagacagcca gctggtatct acgctcatgt
     2761 ctgtttatca agataagaca ggagatttga caagcgagcc aatctcgtca ggtggagcta
     2821 cctttgctcg taccatgcca aactgtgtgg cctttggtgc atgtttccca gatacagaac
     2881 aaacagagca tcaggaaaat gaacgcatgc cattagaaga cttatataaa acaatggata
     2941 tttatgctga ggcagtctat cgcctagctg cggaatagcc attatcagta ttgaatagta
     3001 aattacagtt taaaagctct tagtgaaata tctaagagct tttcttatga agaatatcat
     3061 taaaaagatg agatagaaat gtgtcactgt tcacaagtag tgtacaaaaa tatatgaaag
     3121 tgtgacttat tatatgctgt tttagaaata gaccccatct gcatatagaa taagtcaagt
     3181 tagactattc tacaataaaa cgcttacatg ttatatttgt gacagaaatg cgatcgcaca
     3241 tcaaccagta aactgaattt tgagtcttat aggagactaa ataggtttac aaactgcttt
     3301 attttggcta taggtaggat aaacttgcag attttatagg aggaaataat gaaaaaagaa
     3361 acaagtaagt ttacgaaaaa agtcatcctt ggtcagcttc tcatctgtac cagttttttg
     3421 gtatgggcag gacagaccgt tgcagcagag gaagtatctc agggagaatc agtagcaatc
     3481 aacaatgatg ttccccctac tattgaagca aaaccacttg tggaagctac tccatcaact
     3541 gaaacagaac cttcaactcc agaagaaaaa caggaggaag caaaggtagt tgagaaaaat
     3601 gtgatagaag gaaaagagcc gactaccaac agtcagcact tgatggcttc agaattgacg
     3661 accattcctt cggttgccat aaaaaatcca gagaaagcaa cggatggtgt gtcttacggt
     3721 agttcagatg atgccagcaa caatacaaaa attattgcag gtgaagaaac gggaggtgct
     3781 gataatggct attctcagtg ggaccatgtc tatgttcagt atgactttga aaaggaagtt
     3841 cctgtccata ctgtaaatat ttaccgtaat acctatgaaa atgcaatttc tacgtttaaa
     3901 gatgttaagg tcgagttgtc caccagcgca gacttttctc ctgaaactac gagggtcatc
     3961 ttcgaacagg cagatgtaga agagacagta acaaacaagg ggaaaccaca agttattcaa
     4021 ctcctgtcac cgtttgatgc acgttatatg cgtatttggg gacgggggca ttatatccaa
     4081 aatacaaaca gttcctggaa gggatatagt aatggcgttc tcttcaacga gatagaagtc
     4141 ttggcgcagg ttgaagcaga cgaaagcgca aacgaaaatc cacagaccga gctaatcaat
     4201 cttgccgaat tgaagaagcc atatttttat ggaaaagctc ccaccaatcc agaagccatt
     4261 aatgatggca aatttgatga gaattatact actcaggaat caaaaggcat gggagcctat
     4321 ctccagtatg aatttaaaaa tgtctacact atcgaggaaa tcaaggttca attagctcca
     4381 ggtacctatt ctcattttcg tgtagattta gatgatgatt acaatgcatg gaacacctat
     4441 aaaacagttt atcaagcaag caatctttct gtgaatgaag gagagatttt gacgattgcg
     4501 gttccgaaag gctctaaagc aagatacgtt cgatttacag gggaatctgc tgacggagaa
     4561 gcactccgtt attcagaaat ccaaattatg ggacatggaa aatcatatga tgaagccgca
     4621 cctgaatacc ttccgccaaa atctgattac gataccttag tctggtctga tgaatttgac
     4681 ggagataaga ttgacgaaag caagtggcag attattgatg gcatgtggaa ccacgcagct
     4741 atctataatc ggaaagctgt ttctattaaa aaagaaggag acaagagcta tttatctatt
     4801 cgcactacca atcataatac gacagatgag ctgataaaag cagttggttt ggaccgctat
     4861 aatgatacga aattgccaga aaaagtaacc tggtcatctg gtcgtctaga atctaaggat
     4921 aaatattctt tccaatttgg tcggatggct gttcgcgcca aggtaaatga ctctaaggga
     4981 atctggccgg ctatttggat gttggcacag gatgagactg gtcacgatga gattgatgtt
     5041 ttggaatatc tagggcaaaa tccatgggag gcatggacaa ccaatcattt tggcattcta
     5101 gctaaaaata aggaatctca cggtgtaccg attaagaatt atgaggcctg gagtcaggaa
     5161 ttccacgtct atgaagtaga gtggactcca gatgttatca aatggtatat tgatggaaaa
     5221 tttgttttcc aaaccatgcg tggtaaggat agggatggta tgcacacccg ccctatgttc
     5281 ccaatactgg aaacccaagt tggtgatggc tgggttggtg acgttgacta cagcaaaaat
     5341 atgaccaagc aagatagtga atacctgatt gactgggtac gcgtttacca aaaagcagga
     5401 caagacaagg tttactttga taatctagac gatgcaactg ctagtgacta tacaattaaa
     5461 ccaagtgaga aacgtggtca attagtatca gtttcacacg gtcaggctgc gcatgaaaac
     5521 aaaaataact tttattatgg aggacaacca cgttacgaaa caagtcgtct atatgcagat
     5581 ggtcaaggtg agaatgcact catttataag gtgaatgatc caaaagcact ccatcttaca
     5641 acctattata aaaccttgga agattatgca gtatacaatg ataaggcatg ggccaaggaa
     5701 ggaaaatcta ttcgtaaaca cttggtagga gcagctgaag gggcaattga ttttaccgtc
     5761 tattcatcgg ttgatgggaa aacttggaat aaggagacaa caagtgtagt tgataatttt
     5821 gtagaggcga caccagccta tgcacgtacg acatttgata ttagagacat ccgaagagga
     5881 accaagtata tcaagattgt ctttccagaa ttatcaggta tatcctataa attggaaagc
     5941 ggagctgaaa aagcagcggt tgctagtgat gtgcaactgg caaaagttac ctttgtagct
     6001 gcagacccga gtgcagagcc agaaaaaccg attgttgacg aacgtaaatt aagtttatcc
     6061 aaagttttct ctctagatgc tggccgtaaa tatttctcag ttgaccaatt aaaagagatt
     6121 gttgatttgg cttcttatta tggttataca gatttgcacc tattggtggg taatgatggc
     6181 atgcgattcc tattggatga tatggaattg acggttggtg ataagaccta taccagcgat
     6241 gcggtgaagc aggcccttat caatggaaat aatcattatt acaatgatcc aaatggaaat
     6301 tatcttaccc aggcagagat ggatgaactg attgcttatg ctaaggcaag taatgttcgt
     6361 ttgattccag ctgtaaatag cccgggacac atggatgcta ttttagaagc catggaagag
     6421 cttggtatcc catctcctaa atttacttac aacggtaaaa cttctgcgcg aacagttgac
     6481 ttaaataaca aagaagcgat tgcttttacc aaagcattaa ttgataaata tgctggatat
     6541 ttttcagata aggccaaaat tttcaatatc ggtctggacg aatatgcaaa tgatgctaca
     6601 aatgcgtcgg gctggcgtat ccttcaatct cagggagact atggtaaatt tattcaatat
     6661 gccaatgatt tagcagctat cgtcaagaag catggtttag agccaatggc tttcaatgac
     6721 ggtatctatt ataaccacga tactagttca ggtacttttg acaaggatat tattatttct
     6781 ttctggactg gtggctgggg aggatatgat gttgcctcat ctaagtttct tgctgacaaa
     6841 ggccataaga ttttaaatac caatgatgct tggtactatg ttattggacg tgaagcagaa
     6901 ggttggggat ggtataatct tgatcagggt ctgcgtggaa ttgaatcaac accgctggaa
     6961 gttgttcaca aaaatgaaaa ctcagagata ccggtaattg gtagcatggt tgctgtctgg
     7021 gcagatgatc caagcaaaga atacagttat gattctgttc atcgcctcat gtacgagttt
     7081 gtaatggcga atccaactta ctttttagct gattatgttg atttgcacga agaaattagc
     7141 aagcttcctg ctgatttgag tgattatagt ccagagagcg tagcaaactt aaaagaggtt
     7201 ttggataaga ttgactggaa actcagtaaa aataaccagg catttgtaga tggttattta
     7261 gcagaggtaa aagctgcgcg tgaagcatta gttcctctgc caccactagt gacaacaaaa
     7321 ggagacagcg tcaaagcgga gcccttacca gtagggcagt tacctttgat taccgctaag
     7381 ggaaaaagtg tccaagcaga accacgtccc gcctttaagg gatacctgac accaaactat
     7441 ggtccctctg tcacgccttt atcccttgta tcaaaaccaa gcagtgagca gtcaaattcc
     7501 aagcaagcag catctcagaa gaaagaattg ccaaatacag gcgcagtaga tggtcttgga
     7561 ttcactcttc ttggacttat cggcctagca actgctagtc gtcggaggaa agcaacagac
     7621 agtaaataag tattgtttac aaataacacc atcccagaag ttaagttggg atggtgttat
     7681 attatatctt aaaagcgtct tcaaaacttt gatattcctg ataaaggtgc cattggatga
     7741 gtgttgactg ttgtaaaaag gcatcatcaa ctcgaagtaa ctgctgctga tacagtaaaa
     7801 ggaacttttt aaggttttgt ttagaccatc cgatttcttc tccttgttgt aggactggca
     7861 ggagagattc taaatcatca actaagtagg aaatttgcca tttctttaaa tgatttataa
     7921 acaaagggat tttttgagcg aaatatcgag aggatagcgt tttgtagata ccgttatgct
     7981 caatagaggt aatcaataaa tatagttcgt tccaagattg tatgttctgt tcggaatagt
     8041 tgggaacaca gcgaaatctt tcgattttaa aagaaagttt atttttgtat tgaaggcggt
     8101 aaaagataat ctgatttgca aagtaaaagt taggaatatc tcgcagtgct tcttttaaat
     8161 gattatcacc tagggaaagt tttgcgttat aagtggctaa gaaagtcata aaggcaataa
     8221 agaatgttag acctaaaaag ccatattgaa tgggaaaacc tgtcaggatg gaataatgga
     8281 ttaataaaag acacgtaccg ctaattagcg gatgtactcg cttattcaag taacgtaatg
     8341 gcttcactac ctcttcaact tcgggagaac caaggtattt atagttaaag agtagactca
     8401 gctgattcca tagaataata aagaaaagga agcggtagtc ataatcaaaa atactaagta
     8461 ggtaagtgaa tagtgtaaat agtatcagat agatagtcgt tacattatga cgagatttag
     8521 atggaataaa ctcggtctta gtcgtttgga ataataagta gatagctaag gcgtaagcaa
     8581 atcctctaaa gatactggta agactaaaaa catggtattc aaaaatatcc agatatgcac
     8641 ctataaagct aggaatcata catagagcaa taatgcctcc tagtatatac aaatgcctat
     8701 taaaatcctt ctgaaataca ggttcgtagt ctaaggagca tctccttttt tgtagacgat
     8761 ttaggacccg caaggtcaag aaggaacccc aaatattgct gagaaggaag ctgatttgtt
     8821 catctcccag ttcaattgta gttcccgtaa gacaggtaag agaaataagc aaagtgagta
     8881 gagataagaa ttgcgcaatt ccaataaata ttgatagtgc taataatagt cggttatcat
     8941 ttttattttc gaattgagct cgccgcgttt tgcaccattc taaaagatag gctctgttac
     9001 ttgctttacg acaagatttt gctcgtcgct caatgagtcg tatgactcga atatcatata
     9061 ttgaatcaag gattgattcg ttcaattgct cgagtatcaa agccatctga cttggatgat
     9121 atgatagtag ggccttccag cgtgcatagg agcgatttgt gctagaagct aaggttgtta
     9181 acagagtgtg tacatctagc atgtcctacc aactttcctc tagtccatct agctggtttt
     9241 caaatatttt gttagctttc gcgatgcgtt ttgcatcttg ggtctcaatc actttttcat
     9301 atcgctgaat acagttcatc aaataatcac gctgttcggc taatagggtc cggaatagac
     9361 gttctgcgcg tgctcgtaat aattggtaat gttcactatc tcgaggatgg attttcaaag
     9421 aagctagttt tgctcttttt tccaatattt cttcggcgga tagctgttgt cgatcacgta
     9481 gtattgtttt gttgtacact tttccggtag atagaacggt aatatctaca tcgagaatac
     9541 cgtttatatc ataggagaag cggcagtcta ttgcttcatg ttcttcatga tttacaggga
     9601 ttggaatatc caaggaaccg agaagaagat tggtgtcggc ttggtagttt tctccttgat
     9661 aaatggtaaa tagaacatgt tgctgcccta attcattcgt ccagtagcgt tcgacgtagg
     9721 aggcaggaag tgttgtattt ctttctatta tgggtgagaa gacatttcca acaatggcag
     9781 tacctaatgt aaaaggacaa atgtctgtta acacaacatc ttttataccc ttgtcacgtt
     9841 ttttaatacc tgttacaata ccacacccca tagctacggc tttatcctga tcaactttaa
     9901 cggagatggg acgtttgagc agaaaaatta gatagtcttg aatgagtttc attttagttg
     9961 agccgccaac taggatgaca tcggttaagt cttcagcatg tatctgggca tctcgtagtg
    10021 cattttgaat aggggcattc atttttgcaa ggagaaaacg acaaatctcc acatatcgct
    10081 ccttagttaa tttatacaca tgaagactat cgttgatgtt tacagacatt cgaacgctat
    10141 cttccttatt gagggccaat tttgcttttt cagcttcctg gtaaaggaat cccattacct
    10201 cgtcagacaa gtctgatttt ttataaggaa gattttggat gaagtcttca acaatttgtt
    10261 gagtgaagtc ttccccacct aagtggtttt ctccagcaac cgatacgatt tcaataacat
    10321 tggcaaaagc atcaacaatt gaaatgtcaa gtgttccccc accgaagtca ataatcatat
    10381 aagtggcatc ttcttctcga ctgtggtgga gagcaagggc ggcagcagat ggttcattga
    10441 taattcgttc aattttgacc cctgctaagt gaccagcaat ttttgttgct gcgcgctgat
    10501 catcgctgaa ataggcaggg acgctgacaa taatttcatc aaccttttca cctagaaatt
    10561 cttcggcatc ttcaatcaat ttttttaata tgaaggcgct aagctcctca ggtagataca
    10621 tctgatcacc tagaggtaat ttttttccag ttcccattag gcgtttgaat cttgattgtg
    10681 taagatgagg atgactcatc aaccgttctt tggcaaattt tcctacgatg atgtctccgt
    10741 tgtcagataa accgactaca gaaggtgtta agaaatcgcc caaattgttg ggaatgagtt
    10801 ctaccttatt attacgccat gttgcaacta gtgaatttgt tgttcctaaa tcgattccaa
    10861 taatcatact aatctctccg ttgataaacc tttttgagtc tcaggattat ttaatcctat
    10921 ccaataaatg tatccagcca gttcatttaa accataattt tgacagagtt gaacaagttc
    10981 aatacggtgt tcccaagggc caaagaagta gtagtttaaa agatgggctg ttagtttgtt
    11041 acagaattgt tcattggcta caaaatagcg gaagttatca ctgcgaaagg ctttcaatag
    11101 taaataaaaa tcgcttacca attcgagaga agacaataat tttgctagat actcttctgc
    11161 tgcttgtgct attgattctg tatcggtatt aaattgatct tctaattgct tttgtttatc
    11221 ttgtgataga taaagagcta gttcatctaa tcccagtagt tcacactgct caatgacctt
    11281 tttgcgttca aattcttccc cgtaaaaagt aagctgactg agttcagcaa ttagttgctt
    11341 tcgtatttct atatctctga tatggaaatt gaattcatcg gaaattaaaa tttgatatag
    11401 aagatggtag tagggggagt ttttgcaggc aatttttata ttgtctacaa agttggtatt
    11461 ttcaaatagt tggttgttgg cagtgatggt ttgttcgctt gcatcctgtt cgggaatttc
    11521 ttccgaatgt gagaaagtag agaaatcaaa aatggaatga gaaatatctt cggttttatt
    11581 ctcattgcga tcatcaaaga aatcaaacga tgtcgcactc tgctgatttt caaggttgtt
    11641 ttgctctcca aactcagtaa atgtttgttt tggctttggt cttgcttgct tagcgtattg
    11701 taaggctgat ttataagcat gctgtaggcg tttaaaacct tcggggtctt cttcaggatg
    11761 gaccttttta atccgttccg cgtaggctaa ttttatagta cgttgatctg ttgttgcagc
    11821 aatttgcaac tcttgccaac aacttttcat attcattact cctttatgga tacttaaatt
    11881 attatagcat atttgttgcg aaaaattaat aagcctaggt atttctaggc ttataattta
    11941 ctaaagaaaa atggtggagt aaactgtttc aagtgctcga agcaagcttg tgccccctcg
    12001 acatcttcac aaatgatgag acagacatcg tcaccgcaga cggtcgctac aatttgagga
    12061 atctccatgg catccaaaat agaaccgaat gagttggcca atccaggtag ggtcttgagc
    12121 accacttgat gttggatagg ttttagcatg accaaagcat cttccatata gagtcgcagt
    12181 cgtttttccc agcgagtagg agcaatgggg ttgatgacat agtgagaaga atcatcttcg
    12241 ttgactttga caagattgag catcttgatg tcacgggaga gggtagattg ggtgacggag
    12301 actccgttga cctctagtaa ttcttgcaat tcctgctggg tatgtatttt cttctccatg
    12361 attagagaca ggatcagctg atggcggctt tcaatcttgt tcatagggcc ctccttgaga
    12421 tgtaaggaaa ataaaatctg aactcagaat aaattggtga taacagccta ttgaataaac
    12481 attgcatccc caaaactaaa gaagcggtag cgttcttcaa cagcatgttt ataggcatct
    12541 aaggtaaatt ctctacctgc aaaggcagaa actagcataa ccaaagtaga ttttggtagg
    12601 tggaaattgg ttgagaaggc atcaacgatt cggaaggtgt agccaggttt gatgaagata
    12661 tttgtccaac cagaggcagc ttccaaacgg ccatcaaatt tattaccgat ggtttcgagg
    12721 gtgcggatgg atgtcgtgcc gactgcgatg atacgaccac cgctatcttt gacctgattg
    12781 agggtttgag cagcttctgc tgataggtta tagaattccg agtgcatttc atgctcatca
    12841 acgttatcaa cagagactgg tcggaaggtc ccaagtccaa cgtgaagagt caaatagact
    12901 agcttcactc ctttagcttc gattttttcg agtaattctt gggtgaaatg tagtccagca
    12961 gttggagctg cggcagaacc gttttccttg gcataaactg tttgatagcg ttcgcggtct
    13021 tctaattttt catgaatgta aggtggaagt ggcatttcgc ctagactttc caagacttca
    13081 aggaagatac cttcatagga gaattcaact attcttccac cgtgttctaa ttcttctacg
    13141 atagtagcat ttaatcgtcc gtcaccaaaa gcgactgtgg caccgacctt cagacgtttt
    13201 gctggtttgg caagaacttc ccactgatca ccttgggtat tttttaaaag caaaagctca
    13261 acatgtccca tagtttcagg cttgtagcca tagagacggg caggcagaac acgtgtattg
    13321 ttcatgacca gagcatcacc gggattcagc tggtcgatga tatggtcaaa gtgactgtca
    13381 accctgctcc gtttttcgcg gtcgaggatc aatagtttag agctgtcgcg cttttcaagg
    13441 ggaacttgag cgataagctc ttcgggtaaa tcaaaatcaa aatctgcagt attcatattc
    13501 actccttaga ctaaaataaa a
//
LOCUS       DBNFCX010000062        13328 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.062, whole genome shotgun sequence.
ACCESSION   DBNFCX010000062 DBNFCX010000000
VERSION     DBNFCX010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 13328)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13328)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13328
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.062"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..122)
                     /locus_tag="AC1PJC_001549"
     CDS             complement(<1..122)
                     /locus_tag="AC1PJC_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HIP6620532.1"
                     /translation="MEDKHQKFSLTWFFRLFLNSQAVTFLLVTLLTFLTIFIFS"
     gene            258..1262
                     /locus_tag="AC1PJC_001550"
     CDS             258..1262
                     /locus_tag="AC1PJC_001550"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052689 - carboxylic ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactonase family protein"
                     /protein_id="HIP6620533.1"
                     /translation="MTIYFGTYTKRESKGIYKANFDSETGQLSNLELVTEEPNPTYLA
                     FDKAGHLYSVGAENGLGGIAAFNADYTLLNHVVSEGAPLCYVAVDEARDLVYGSNFHK
                     GQLLVYKRLADGSLELADVAQHEGSGPHENQASAHVHFSDLTPDKFLVTCDLGCDQVV
                     TYKVSDQGKVEKIATYQAAPGSGPRHIVFHPVAKIAYLICELNSTIEVLIYDGWGQFE
                     HLQTVSTLPEDHTGFNGTAAIRITKDGKFIYGSNRGNDSIAVYKTLADASLELVEIVP
                     TNGKTPRDFTLSPDEKHLIVVHQDSDNATVFKRDAENGCLTELSHDFYVPEAVCVTFL
                     "
     gene            1326..1511
                     /locus_tag="AC1PJC_001551"
     CDS             1326..1511
                     /locus_tag="AC1PJC_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620534.1"
                     /translation="MNPVDLFNQVKELIANKDFDGAKQFIEENKDQFGEYLEQAKGLL
                     SGSEGVNGLLDKVKGLF"
     gene            complement(1544..2185)
                     /locus_tag="AC1PJC_001552"
     CDS             complement(1544..2185)
                     /locus_tag="AC1PJC_001552"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HIP6620535.1"
                     /translation="MIEWIFFDLGSTLLDEEAAYGYYIDKCVKKLESLDIEVSSDSYK
                     KKMMEYAHKSLDPIRATWQYFAPTEPRPLWTNEGVSLYPETIDALEKLSQNYRLGIIA
                     NQSSSIRELLKEWGIESYFQLIILSEEVGLSKPNTAIFTLALQKTNIPADRVVYVGDR
                     YDNDILPAKSLGMWTVRILTGFGKHASENEKLKSDWIIPSLQEITNIFEQTKN"
     gene            complement(2523..3830)
                     /gene="eno"
                     /locus_tag="AC1PJC_001553"
     CDS             complement(2523..3830)
                     /gene="eno"
                     /locus_tag="AC1PJC_001553"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002985288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface-displayed alpha-enolase"
                     /protein_id="HIP6620536.1"
                     /translation="MSIITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTG
                     EHEAVELRDGDKSRYLGLGTQKAVDNVNNVIADAIIGYDVRDQQAIDRAMIALDGTPN
                     KGKLGANAILGVSIAVARAAADYLEVPLYTYLGGFNTKVLPTPMMNIINGGSHSDAPI
                     AFQEFMILPVGAPSFKEGLRWGAEVFHALKKILKARGLVTAVGDEGGFAPKFEGTEDG
                     VETIIEAIEAAGYEAGENGIMIGFDCASSEFYDKERKVYDYTKFEGEGAAVRTSAEQI
                     DYLEELVNKYPIITIEDGMDENDWDGWKALTERLGKRVQLVGDDFFVTNTDYLARGIK
                     EGAANSILIKVNQIGTLTETFEAIEMAKEAGYTAVVSHRSGETEDSTIADIAVATNAG
                     QIKTGSLSRTDRIAKYNQLLRIEDQLGEVAVYKGLNSFYNLKK"
     gene            3980..4432
                     /locus_tag="AC1PJC_001554"
     CDS             3980..4432
                     /locus_tag="AC1PJC_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1694 domain-containing protein"
                     /protein_id="HIP6620537.1"
                     /translation="MNDLNTTILQKASGETRLNPDEQRLYMGTYRERVVLLVSFDDLS
                     SEVVGNKFDTICQKLANRYSPLFLKLSPALSDKQQISLLKIAQAFGITTAIIDEKIGQ
                     SPYALVFHTNHAVDNEEVSLESIFPNLISKPEEKKEDAKPSFWKKLFG"
     gene            complement(4497..4667)
                     /locus_tag="AC1PJC_001555"
     CDS             complement(4497..4667)
                     /locus_tag="AC1PJC_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620538.1"
                     /translation="MELVKYVAIILFIFICLVKLVSVMRLSEKERGMEMNVIKANGAM
                     FFFNEKMKEADC"
     gene            complement(4658..5785)
                     /locus_tag="AC1PJC_001556"
     CDS             complement(4658..5785)
                     /locus_tag="AC1PJC_001556"
                     /EC_number="2.7.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008887 - glycerate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HIP6620539.1"
                     /translation="MHILIAPDSFKESLSATKVAEAIKKGFSKVYPQAGYDLIPLGDG
                     GEGTVESLMQALSLDGTQTWVTGPFGDKIKVSYAVKDDLAVFEMAEIVGLASIPHERR
                     SPLFIKTQGVGELIVELVQNGVKRIFIGVGGSASHDGGIGMAAGLGVKFYNREGKEVE
                     AIGAHIGEIVSFSTEDMLVDLSQVRIDLVTDVENPLCGPAGATFVFAGQKGLASAEFE
                     LVDKKMESFYKLVNPMLLDLAGAGAGGGMAAGLVQFAGARIQKGIDFVLDQLDFDHRV
                     TKADLVVVGEGRMDAQSLSGKTPIGVARRTPTGIPIIAICGSLKGDLPEFPFENICAA
                     FPIIASVESLEDTLQKAEKNLVRTAEQVARILQLGGQQRWN"
     gene            5893..6543
                     /locus_tag="AC1PJC_001557"
     CDS             5893..6543
                     /locus_tag="AC1PJC_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HIP6620540.1"
                     /translation="MYQTILFDLDGTLTDSGQGILNSVAYALEKMGIEEPDTANLNRF
                     IGPPLYESFSRFYQLNPEDTQSAVDAFRVYFKEKGMFENQLYPGIIPLLEELRTAGKT
                     LVIATSKPEIFAKQILEHFGISHYFDVIAGASLDSSRISKADVIGYAINQLEAFPKHA
                     VMIGDREHDIEGARMHQLPAIGVLYGYGNKQEFEKAGATMIVETVQDLKRVLLTTE"
     gene            complement(6574..7209)
                     /gene="serB"
                     /locus_tag="AC1PJC_001558"
     CDS             complement(6574..7209)
                     /gene="serB"
                     /locus_tag="AC1PJC_001558"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036424 - L-phosphoserine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HIP6620541.1"
                     /translation="MTTGLLVMDVDSTLILEEGIDLLGEEAGLGEQVAAITERAMRGE
                     LDFEEALRERVALLKGLPVSVFDRIIKKIHFTPGAAELVSELKMRGYKVAVVSGGFHE
                     TVDRLAAQLELDYVRANRLEVVNGVLTGQVLCEIVTKDTKKACLEEWAADNGLSLSQT
                     IAMGDGANDLPMIQRAGIGVAFCAKPIVQEQAPYQINEKNLYKLIEILDSK"
     gene            complement(7261..8985)
                     /gene="ezrA"
                     /locus_tag="AC1PJC_001559"
     CDS             complement(7261..8985)
                     /gene="ezrA"
                     /locus_tag="AC1PJC_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation ring formation regulator EzrA"
                     /protein_id="HIP6620542.1"
                     /translation="MPTGTIILIVSIVIILIIAYVACLIVRKRNDNLLVALEERKEEL
                     FNLPVNEEVEAVKALHLIGQSQVSFREWNQKWVDLSLNSFADIENHIFEAEGYNNAFR
                     FVSAKNAIDSIESQIDLIEEDIASIRHGLMELKEQEEKNSGRVKHALNLFDSLQEAVR
                     ENPDSYGETLPELEKQLKNIEVEFSEFVMLNSSGDPIEASEILDKTEEHMIALNQIMD
                     RIPSLIERVTKDFPEQLEDLESGYRKLVEQNYLFTEANIESQFQNIRVSIRENTALIV
                     SFDLDAAEAENEGIQAKIDHLYKVFNREIEANKEAVKISKNLPKFLEHVVQNTQLLDE
                     ESQRLNATYLLADSKLSRINQLKARLESIEIVVTESVEDIENPQVAYSILEERLDHSL
                     ASLKEIEEEQLVLADYLKSQELSENTARKKATLYINKLHTLKRYMEKRNLPGIPAEFL
                     TNFFRTSDHVEALIAELDYKRINIEVVNRLLENATYDMNQLEELAYLIVQNATLTEQL
                     LQYSNRYRSFDESVQKAFNRSLSIFEKDFDYQAAFEEISFALETVEPGVTERFVRSYE
                     KTREAIRY"
     gene            complement(9074..11026)
                     /gene="gyrB"
                     /locus_tag="AC1PJC_001560"
     CDS             complement(9074..11026)
                     /gene="gyrB"
                     /locus_tag="AC1PJC_001560"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015604652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HIP6620543.1"
                     /translation="MTEEIKDLQEKAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEG
                     LHHLVWEIVDNSIDEALAGFADKIEVYIEPDNSITVIDNGRGIPVDIQEKTGRPAVET
                     VFTVLHAGGKFGGGGYKVSGGLHGVGSSVVNALSTQLDVHVYKNGQVYFQEYKRGEVV
                     ADLEVVGETDRSGTTVHFTPDPEIFTETTEFDFAKLNKRIQELAFLNRGLNLSITDKR
                     EGVEQTKEYHYEGGIASYVEYLNENKDVIFETPIYTEGEMDDITVEVAMQYTTSYHEN
                     VVSFANNIHTHEGGTHEQGFRTALTRVINDYAKKNKILKENEDNLTGEDVREGLTAVI
                     SVKHPGPQFEGQTKTKLGNSEVVKITNRLFSDAFAEFLLENPQIARRIVEKGILASKA
                     RIAAKRAREVTRKKSGLEISNLPGKLADCSSNDATKTELFIVEGDSAGGSAKSGRDRE
                     FQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGFGADFDVSKARYQKLVIMTD
                     ADVDGAHIRTLLLTLFYRYMRPVVEAGYVYIAQPPIYGIKVGSEIKEYIQPGVNQEQE
                     LQDALERHSTGRSKPTIQRYKGLGEMDDHQLWETTMNPENRLMARVSVDDAAEADKIF
                     DMLMGDKVEPRREFIEENAVYSTLDV"
     gene            complement(11208..11747)
                     /locus_tag="AC1PJC_001561"
     CDS             complement(11208..11747)
                     /locus_tag="AC1PJC_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1 family glyoxalase III"
                     /protein_id="HIP6620544.1"
                     /translation="MTRVAVVLADGFEEIEALAPVDVFRRARFDCQIVGLDSHEVEGS
                     HGIRVQTDQVFDGDLSSFDLIVLPGGMPGSVHLRDSESLITELQRAVASGKSVAAICA
                     APIVLDKAGLLDSRHYTCFPGKEKDIPSGIHLEEDVVVDGPIITSRGAGTSLDFAYKL
                     VDLFGGDGESLAQTMVYHS"
     gene            complement(11761..12990)
                     /locus_tag="AC1PJC_001562"
     CDS             complement(11761..12990)
                     /locus_tag="AC1PJC_001562"
                     /EC_number="2.4.99.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008955 - peptidoglycan
                     glycosyltransferase activity [Evidence IEA];
                     GO_function: GO:0015648 - lipid-linked peptidoglycan
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HIP6620545.1"
                     /translation="MRKLMKNRGTIDSRVDYSLILPVFFLLVVGIISLYIAVSQDYPD
                     NVVQMVGQQIAWIGIGTVAAFLVMFFSTKFLWQITPYLYVLGLGLMVLPLFFYSPDLV
                     ASTGAKNWVTIGGMTLFQPSEFMKIAYIIMLSRVIVTFHKYYPNRKIREDFMLIGYMT
                     LFTIPVLILLVLQKDLGTSLVFVAIFSGMLLLSGVSWKILLPTALTGIVLVGGFMLIF
                     ISPGGTTFLHNLGMDTYKINRIEAWLDPFKNAQSTTYQQAQSLIAIGSGGLKGLGFNK
                     TNLLIPVRESDMIFTVIGEDFGFIGGTVLIGLYLLLIYRMLRVTLKSNNRYYTYISTG
                     YIMMLLFHVFENVGAATGLLPLTGIPLPFISQGGSSMVSNLIGVGLVLSMGYQSRLAD
                     EKEINRSRRYRKITIKR"
BASE COUNT         4029 a         3025 c         2321 g         3953 t
ORIGIN      
        1 ttactaaaaa taaatatagt caaaaaagtc agcaaggtta ctaataaaaa tgtcaccgct
       61 tggctattta aaaacaagcg gaaaaaccaa gtcagactaa atttttgatg cttatcctcc
      121 atctaataca ctcctagtct ttttttctat tgtaacatgg agaaaggatt tttgtaaaaa
      181 tcaactacag aatttatacg actttctcag aaaaacatgg tataatttta tcaatcattt
      241 ccaaaaagga gaatcctatg actatctatt tcggtaccta cacaaaacgt gaatcaaaag
      301 gaatttataa agcaaatttt gactctgaaa caggacaact tagcaatcta gaattggtca
      361 ctgaagaacc taaccctacc taccttgcct ttgataaggc cggacatcta tactccgtcg
      421 gcgctgaaaa tggtctagga ggtatcgctg cctttaatgc tgactatact ctactcaacc
      481 atgttgtatc agagggcgca ccactttgct atgtcgctgt agatgaagca agagatttag
      541 tttatggttc caatttccac aaagggcaac tacttgttta taaacgtttg gcggatggtt
      601 ctctagaatt agctgatgtc gctcaacacg aaggatctgg accgcacgaa aaccaagctt
      661 ccgcccatgt tcacttttct gatttgacgc ccgataaatt tttagtaacc tgtgatttag
      721 gatgtgatca agtggtaacc tataaggtat ctgaccaagg aaaagtagag aaaatcgcaa
      781 cctatcaggc tgcgccagga agtggtccac gtcacattgt cttccatcct gtcgcaaaaa
      841 tcgcctatct catctgtgaa ctcaattcaa ctattgaggt gcttatctat gacggctggg
      901 gacaatttga acacctacaa actgtctcta ctctcccaga agaccatact ggtttcaacg
      961 gaactgccgc tattcgcatc acaaaggatg gtaaatttat ttatggatcc aaccgcggaa
     1021 acgactctat cgcagtctac aaaacgcttg ctgatgccag cttagaatta gttgaaatcg
     1081 tcccaacaaa tggaaaaact cctcgcgatt tcacgcttag tcctgatgaa aagcatttga
     1141 ttgttgtcca tcaagattct gacaatgcaa ctgtattcaa aagagatgcc gaaaatggct
     1201 gtttgactga gctttcacac gatttctatg ttcctgaagc agtttgcgtt acatttttat
     1261 aagtcgtttc agttgtgaaa tccgtccagt tttggtttaa tagtctcata ggaggtgatt
     1321 tcaacatgaa tccagtagat ctttttaacc aagtaaaaga attgattgca aacaaagact
     1381 ttgatggtgc aaaacaattt atcgaagaaa acaaggacca attcggtgaa tacttggaac
     1441 aagcaaaagg cttgttatca ggttctgaag gtgttaacgg tcttttagat aaagttaaag
     1501 gcttgttcta atacatgtaa aaactaggct gagaatgttc agtctagttt tttgtttgtt
     1561 caaaaatatt tgttatctct tgcaatgaag gaattatcca atcgctcttc aatttttcat
     1621 tttcactggc atgcttccca aaacctgtca gtatccgtac agtccacatt cccaaagatt
     1681 tagcaggcag aatatcatta tcatacctat ccccgacata gacaactcta tctgcaggga
     1741 tgtttgtttt ttgcaaggca agtgtgaaaa tagctgtatt tggtttagat aaaccaacct
     1801 cttcagagag gatgatgagt tgaaaataag actcaattcc ccactcttta agcagttctc
     1861 taatactact agactgattg gcaataatcc ccaatcgata gttttgtgat aacttctcta
     1921 gagcatctat tgtttcagga tacaggctca caccctcatt tgtccataaa ggacgtggct
     1981 cggtcggtgc aaaatattgc caggtcgcac gaatgggatc cagcgactta tgagcatact
     2041 ccatcatttt ctttttataa gaatctgatg aaacctctat atccagagac tctaacttct
     2101 tcacacattt gtctatataa taaccataag cagcctcttc atctaaaagc gtcgaaccca
     2161 aatcaaaaaa tatccactct atcatcccac tctccatctc ttttcaaaat gagaatactt
     2221 aagttgatct gcctttttag aatatcattt tatcaatatc aaggcaaaga aaattcccta
     2281 ggaaagccta gagagtttta ttaatccctc actatactag ctcggggata aaacagtctc
     2341 ccagacattg aaaaacaagt ccgaaaatct tcggacttgt tcttattata accttcgcta
     2401 ttctagctcg gggataaaac agtctcccag acattgaaaa acaagtccga agattgtcgg
     2461 acttgttctt actataaccc tcgctatgct agctcgggga taaattagta cactgtacta
     2521 atttattttt tcaagttgta gaatgagttc aagcctttgt agactgcaac ttcaccaagt
     2581 tgatcttcaa tacgaagcaa ttggttgtac ttagcgatac ggtctgtacg tgacaatgaa
     2641 ccagtcttga tttggcctgc gttagttgca actgcgatgt cagcgattgt tgaatcttca
     2701 gtttcacctg aacggtgtga tacaactgca gtgtagccag cttctttagc catttcgata
     2761 gcttcaaatg tttcagtaag agtaccgatt tggttaactt tgataaggat tgagttagca
     2821 gcaccttctt tgataccacg tgcaaggtag tcagtgtttg ttacgaagaa gtcgtcacca
     2881 accaattgaa cgcgtttgcc aagacgctca gtaagtgctt tccaaccatc ccagtcgttt
     2941 tcatccatac catcttcgat agtgatgatt gggtatttgt taaccaattc ttcaaggtag
     3001 tcgatttgct ctgcagatgt acgaacagca gcaccttcgc cttcgaattt agtgtagtcg
     3061 taaactttac gctctttgtc gtagaactca gatgacgcac agtcgaaacc gatcatgatg
     3121 ccgttttcgc cagcttcgta accagcagct tcgatagctt cgatgattgt ttcaacaccg
     3181 tcttcagttc cttcgaactt aggagcgaaa ccaccttcgt caccaacagc tgttaccaaa
     3241 ccacgagctt tcaagatttt cttcaaagcg tggaatactt cagcacccca acgaagacct
     3301 tctttgaatg aaggagcgcc aactggcaag atcatgaatt cttggaaagc gattggagcg
     3361 tctgagtgag aaccaccgtt gatgatgttc atcattggag ttggcaatac tttagtgttg
     3421 aatccgccaa ggtaagtgta aagtggcact tcaaggtagt cagcagctgc acgcgcaaca
     3481 gcgatagaaa caccaaggat tgcgtttgca cccaatttac ctttgttagg agtaccgtca
     3541 agagcgatca tagcgcggtc gatagcttgt tgatcacgaa cgtcataacc gatgatagcg
     3601 tcagcaatca cgttatttac gttgtcaaca gctttttgtg taccaagacc aaggtaacga
     3661 gacttgtcac cgtcgcgaag ttcaactgct tcgtgctcac cagtagaagc tcctgaagga
     3721 accataccac gtccgaaagc acctgattca gtataaactt caacttcaag tgtagggtta
     3781 ccgcgtgagt caaggacttc gcgagcgtaa acatcagtaa taattgacat tatattactc
     3841 tcctttgagt ttaaaattgt tacatagcta tcatacccta aaagaaggga tttttcaaga
     3901 aaaaacaggt tattttactg aaagaaatga tgtaaacgcc ttccttttca aagttaactg
     3961 agtatgttat actgaaacca tgaacgattt aaatactacc atactacaga aagcctctgg
     4021 cgaaacacga ttgaatccag atgaacaacg tctatacatg ggaacctatc gcgaacgggt
     4081 tgtcctgctc gtttcctttg acgatttgag tagtgaagtc gtcggaaata agttcgatac
     4141 aatttgccaa aaactagcaa acagatactc tcctctattc ctcaaactct cgccagccct
     4201 gtctgacaag caacaaattt cactactaaa aattgctcag gcctttggca ttactaccgc
     4261 tatcatcgat gaaaaaatag gacaatctcc ctacgcactt gtctttcaca caaatcacgc
     4321 tgtggataat gaagaagtta gcttagaatc catatttcca aatcttatct caaaaccaga
     4381 agaaaaaaag gaagatgcaa aaccttcctt ctggaaaaaa ttatttggtt agacttattt
     4441 atcgataaat caacataaat attaaagcaa aataatacag gttagacaaa ggattcctag
     4501 caatctgcct ctttcatttt ttcattgaaa aagaacattg ctccatttgc ctttattaca
     4561 ttcatttcca ttcccctttc tttttcggaa agtctcataa cggatactag ctttacaaga
     4621 caaataaaaa taaataagat aatagccaca tatttcacta attccatctt tgttggcctc
     4681 ctaactgaag aattcttgcc acctgctctg ccgtgcggac caggtttttt tctgcttttt
     4741 gaagcgtgtc ctccaaactt tcaacgcttg caattatcgg aaaagcggcg cagatatttt
     4801 caaaaggaaa ctcgggaaga tcgcctttga ggctaccaca aattgcaatg atgggaatcc
     4861 ccgtcggcgt ccgtctagct actcctatcg gagtcttccc tgataagctt tgggcatcca
     4921 tccgcccttc tccgaccaca accagatccg ctttggtgac gcgatgatca aagtccaact
     4981 gatccaagac aaagtcgatg cctttttgaa tgcgagcacc agcaaattgg actaaacctg
     5041 ctgccatacc tcctccagca cccgctcctg ccaaatcgag tagcattgga ttaactaatt
     5101 tataaaagga ctccattttc ttgtctacta gttcaaattc agcagaggct agacctttct
     5161 gacctgcaaa aacaaatgtg gcacccgctg gtccgcaaag cggattctcc acatccgtta
     5221 ccaaatcaat cctgacctga gatagatcta ccaacatatc ctctgtggaa aagctgacaa
     5281 tctccccgat atgagctcca attgcctcta cttcttttcc ctctcgatta taaaatttca
     5341 ctcctaaacc tgccgccatt ccgataccac catcatgact ggcagagcca cctactccta
     5401 taaatatgcg tttaacacca ttttgaacga gctccacaat cagctcccca accccttgtg
     5461 tcttaataaa gagaggactc cttctttcat gcgggatgct tgccagccct acaatctcag
     5521 ccatttcaaa aaccgcaaga tcatctttaa ccgcatagga aaccttaatt ttatctccaa
     5581 atggacctgt cacccaagtc tgggttccat ccaaggataa ggcctgcatt agactctcaa
     5641 ctgtcccttc gccaccatct cctaggggaa ttaagtcata ccctgcttgt gggtaaacct
     5701 tagaaaatcc ttttttaatc gcttcagcaa cctttgtagc tgaaagagac tctttaaatg
     5761 aatccggagc aatgagaata tgcatggttc taacctcctt tatattatta gtatatcacg
     5821 ctcctattca gctttcaata aatcttttct gtttttcatc gtctgtgtta tactgaaaga
     5881 aaggagataa gtatgtatca aactatatta tttgacttag atggaactct tactgattct
     5941 ggacaaggaa tcttaaactc cgtcgcctac gcactagaaa aaatgggaat cgaagaacca
     6001 gatacagcca atttaaaccg attcatcggc ccgccactct atgaatcttt ttcacgattc
     6061 taccaactca accctgaaga tacacaaagt gcagttgatg ctttccgtgt ctattttaaa
     6121 gaaaaaggaa tgtttgaaaa tcaactctat cctggaatca tccctctgct tgaagaattg
     6181 agaacggctg gaaaaacact agtaattgct acctcaaagc cagaaatatt tgccaaacag
     6241 attctagaac attttggtat ctcacactac tttgatgtca ttgccggtgc tagtctggat
     6301 agtagtcgca tcagtaaggc ggacgtcatc ggctacgcta taaatcaatt agaagcattt
     6361 ccaaaacatg ctgtgatgat tggagatagg gaacatgaca ttgaaggagc acgcatgcac
     6421 caacttcccg ccatcggtgt tctttacggc tatgggaaca agcaggaatt tgaaaaggct
     6481 ggggctacca tgatagtcga aaccgtccaa gatttgaaaa gggttttact gacaacagaa
     6541 tagaagaaaa gtcagcactc agctgacttc tcattattta ctatctaaaa tctctattag
     6601 tttatagaga tttttttcat ttatttggta gggcgcctgt tcttggacaa tcggtttagc
     6661 acagaaagct actccaattc ctgctcgttg aatcattggt agatcatttg ctccatcccc
     6721 catggcaatc gtttgagata gactcagccc attgtctgcc gcccattctt ctaaacatgc
     6781 ttttttagta tctttcgtta caatttcaca caatacttgt cccgtcaata ctccatttac
     6841 tacttctaat cgattagccc gaacatagtc taactctaac tgtgcagcta gtcgatcgac
     6901 tgtttcatga aacccgcctg aaactactgc taccttatag cctcgcattt ttaattctga
     6961 gactaattct gctgctccag gtgtaaagtg gatttttttg ataattcgat caaacacaga
     7021 aacaggcaat ccctttaaca acgccacacg ttcacgtaag gcttcttcaa aatccaattc
     7081 tccacgcata gcacgttcgg taattgctgc aacttgctct cctaaaccgg cctcttctcc
     7141 aagtaaatct attccttctt ccaaaattaa tgttgaatca acatccataa ctaataatcc
     7201 agttgtcatc tccaatattc ctttcaaagt ataaaaataa aaagccaaat ggctttttat
     7261 ctagtagcga atggcttcgc gagttttttc gtatgaacgt acaaaacgct ctgttacacc
     7321 aggttcaact gtttccagag caaatgaaat ttcttcaaat gctgcttggt aatcaaaatc
     7381 cttttcaaaa attgataatg aacggttaaa tgctttttgc acactttcat cgaatgaacg
     7441 ataacggtta gagtattgta gcaactgctc tgttaaagtc gcattttgca caatcaaata
     7501 cgccaactct tccaattgat tcatatcata cgttgcattt tccaacaaac gattaacaac
     7561 ttcgatattg attcgtttat agtctaactc ggcaatcaag gcttccacat gatcgctcgt
     7621 tctaaagaag tttgttaaaa attcagctgg aattcctgga aggttgcgtt tttccatata
     7681 acgcttaagg gtatgcaatt tgttgatata aagtgtagct ttcttacgcg ctgtgttctc
     7741 tgacaattct tgtgatttaa gatagtcagc taaaacaagc tgctcctctt cgatttcttt
     7801 caagcttgcc aatgaatgat ccaaacgctc ttctaaaata gaatatgcaa cttgtggatt
     7861 ttcaatgtcc tccacacttt ctgtaacaac aatttcaatc gattccaaac gagctttaag
     7921 ctgattgatc cgtgaaagtt tgctatctgc cagcaagtaa gttgcattta ggcgttggct
     7981 ttcctcatcc aagagctgtg tattttggac aacatgctcc aagaattttg gcaagttttt
     8041 actaatctta acagcttcct tattcgcttc gatctcacga ttgaagactt tatacaaatg
     8101 atcaattttt gcttgaattc cctcattttc agcttctgcg gcatccaaat caaaggaaac
     8161 aatcaaagca gtattttcac gaattgaaac gcgaatattt tggaactgtg actcgatgtt
     8221 agcttctgtg aacaaataat tctgctcaac cagtttacga taacccgact ccaaatcttc
     8281 caattgctct gggaaatctt ttgtaactcg ttcaatcaaa cttggaatgc gatccatgat
     8341 ttgattgagg gcaatcatat gctcttcagt cttatcaagg atttcagaag cttcaatcgg
     8401 gtcaccagag gaattgagca tcacaaattc agaaaactca acttcaatat ttttcaattg
     8461 tttctcaagt tctggtagtg tctcaccgta gctatctgga ttttcacgaa cagcttcctg
     8521 taaactatcg aacaagttta acgcatgttt tacgcgacca gagtttttct cttcttgctc
     8581 cttcaactcc atcaaaccat gacggataga ggcgatgtct tcttcaatta aatcaatttg
     8641 gctttcgata ctgtcgatag cattctttgc actcacaaag cgaaaggcat tgttatagcc
     8701 ttctgcctca aagatatgat tttcaatgtc ggcaaatgaa ttgagcgaca aatcaaccca
     8761 tttttgattc cattcacgga atgacacctg actttgacca atcaaatgaa gtgctttgac
     8821 agcttcgact tcttcattaa ctggaaggtt aaatagctct tccttacgtt cttccaatgc
     8881 aaccaaaagg ttgtcatttc gtttacgaac aatcaggcaa gctacgtagg caatgattaa
     8941 aataataaca atcgaaacga ttaagatgat tgttcctgta ggcatgtaaa tctccttagc
     9001 tcatagtaat tactagaaaa tatcgcttaa ttataccata aatctctagt atatgcactt
     9061 gtttttttag tttttagaca tccaatgttg aataaacagc attttcctcg ataaactctc
     9121 gacgaggttc aaccttatcc cccattaaca tgtcaaaaat cttatcggct tctgccgcat
     9181 catcaactga aacgcgtgcc atgagacgat tttcaggatt catcgtagtt tcccacaact
     9241 gatgatcatc catttctccc aaacctttgt aacgttggat cgttggcttg gaccgtcccg
     9301 tactatgtct ttctaaggca tcttgcaatt cttgctcttg attaacccca ggttgaatat
     9361 attcttttat ctcacttcca accttgatac cgtaaatagg tggttgagcg atatatacgt
     9421 atcccgcttc tacaacagga cgcatgtagc gataaaataa tgtcagaagg agtgtccgaa
     9481 tatgggcacc atcgacatcg gcatctgtca taatgactaa tttttgataa cgtgccttgc
     9541 taacgtcgaa atcagcacca aagccagttc ccatagctgt aaatagacta cggatttctt
     9601 cgttggccaa aatcttgtcc atgctggctt tttctacgtt caaaatctta ccacgaatcg
     9661 gtaaaatagc ctgaaattca cggtcgcgac cggatttagc tgaaccaccg gctgagtccc
     9721 cctcaacgat gaaaagctct gtcttcgttg catcatttga ggaacaatcc gctaacttac
     9781 ctgggaggtt tgaaatctca agacccgatt tcttacgagt tacctcacgc gcacgcttag
     9841 cagcaatacg cgccttgctt gccaaaatcc ctttttcaac aatccgtcta gcaatctgtg
     9901 gattttccaa aagaaattct gcaaaggcat cagagaaaag gcggttggta attttgacca
     9961 cttcactatt cccaagtttt gtcttagttt gtccctcaaa ttgaggacct gggtgcttaa
    10021 cagaaatgac cgctgtcaag ccttcacgca catcttcacc agtcaaatta tcctcatttt
    10081 ctttgagaat tttatttttc ttggcgtagt cgttgataac acgtgtcaga gctgtacgga
    10141 atccttgctc atgggtacca ccttcatgtg tgtgaatatt gttggcaaaa ctaactacgt
    10201 tttcatgata actcgtcgta tattgcatgg caacctcaac ggtaatatca tccatttcac
    10261 cttctgtata gataggggtc tcaaaaatga catccttgtt ctcattaaga tactcaacgt
    10321 aggaagcaat accaccttca tagtgatatt cctttgtttg ctctactccc tcacgtttgt
    10381 ccgtaataga gagatttaaa ccacgattta ggaaggccaa ttcttggatc cgcttattta
    10441 attttgcaaa gtcgaactca gtcgtctcag taaaaatttc tgggtcaggt gtaaagtgta
    10501 cagttgtacc agaacggtct gtttctccaa caacctccaa atctgcaacg acttcacctc
    10561 gtttatactc ttggaaatat acctgaccat ttttatagac atggacgtct agctgagtag
    10621 atagggcgtt tacgactgat gaacctacgc cgtgcaatcc acctgagacc ttataaccgc
    10681 ctccgccaaa tttaccacct gcatggagca ctgtaaagac agtttctacc gctggacgac
    10741 cagttttttc ctgaatatct accggaatcc cacgtccatt atcaataacc gtgatggagt
    10801 tatctggctc aatataaact tcaattttat ccgcaaaacc agccagcgcc tcatcgattg
    10861 agttgtcgac aatttcccaa accaagtgat ggagaccttc tttagatgtg gagccgatat
    10921 acatccctgg acgcattcga acagcttcaa gaccttccaa gacttgaatc tgactggcat
    10981 catattcttg agccttctct tgtaaatctt tgatttcttc tgtcatttct tttccttatt
    11041 ttctatttgt tgctccttaa aaatagaaaa gccaatccat ctggataaaa gcgagacata
    11101 tttttagagc aaaaatcatt ctaacgaata ccctttatta taccatattt tctaatattt
    11161 tgatagaaaa aagaagagga aacattagct ccatcttctt cattacttta actatgataa
    11221 accattgttt gagctaggct ttccccatct ccaccaaata aatcaaccaa tttataggcg
    11281 aaatccaaac ttgttccagc gcctcggcta gtgataattg gaccatcaac gaccacatcc
    11341 tcttccagat ggatacctga cggaatgtct ttttctttcc ctgggaaaca tgtatagtga
    11401 cgactatcta acaaaccagc cttatccaga acaattggtg ccgcacaaat tgctgctact
    11461 gattttcctg atgcaaccgc tctttgcaat tccgtaatca gtgactctga atctctaagg
    11521 tggacagaac ctggcattcc tcctggtaac acaatcagat caaaggaaga caggtctcca
    11581 tcaaagactt ggtcagtttg aacacgaata ccgtgcgatc cctccacttc atgactatct
    11641 aaaccaacaa tctgacagtc aaaacgagct cgacgaaata catctacagg ggccaatgct
    11701 tcgatttctt caaaaccatc ggctaaaaca accgcaactc ttgtcatata aaccaacttt
    11761 ctaacgtttt atcgtaattt ttctatagcg acgtgatcga tttatttcct tctcatcagc
    11821 tagtcgtgac tgatacccca ttgacagcac tagaccgaca ccaatcagat ttgaaaccat
    11881 ggacgaacca ccttgggaga taaacggcaa aggaatacct gtcaaaggta acaaaccagt
    11941 tgcagcgcca acattttcaa acacatggaa caagagcatc atgatatagc cagttgatat
    12001 gtaagtgtag tatcgattgt ttgacttcaa cgttacccgc agcattcgat aaatgagcaa
    12061 caagtatagt ccaatcaata ccgtcccacc aataaaacca aagtcctctc caatcaccgt
    12121 aaaaatcata tcactttctc gaacaggtat aagaagattt gttttattga aacctagtcc
    12181 ttttaagcca ccacttccga tagctatcaa actttgagct tgctggtagg tcgttgattg
    12241 ggcattttta aagggatcaa gccaggcttc aatacgattg attttataag tatccatccc
    12301 caaattgtgg agaaatgttg ttccaccagg agaaataaaa atcagcataa atccaccaac
    12361 caaaacgatc cccgttaagg cagtcggtaa tagaattttc caagaaactc ctgataatag
    12421 aagcattccg ctaaagattg ctacaaatac taaggaagtt cctaaatctt tctgtaagac
    12481 caacaaaatc aggacgggga tagtaaacag tgtcatataa ccaatcaaca taaaatcctc
    12541 acgaattttt cgatttggat aatatttatg aaaggtgaca atcacccttg acaacataat
    12601 gatgtaggca attttcataa attcggatgg ttgaaaaaga gtcattccac caatcgttac
    12661 ccagtttttt gctcccgttg acgctactaa gtctggactg taaaaaaaca aaggcaatac
    12721 cataagtcct agccctagta cgtacaagta aggtgtgatt tgccacagaa acttagtgga
    12781 aaagaacatg accaaaaaag ctgccactgt tccaattcct atccaagcaa tttgttgacc
    12841 aaccatctgt acaacattat ccggataatc ttgactaacc gcaatgtaga gagaaataat
    12901 ccccacaact aataaaaaaa agaccggtaa aataagtgag tagtctactc gactatcgat
    12961 tgttccccta tttttcatca atttcctcat actttcactt caaattctta ctcgttccat
    13021 tatagcagaa atcatctctc attgaaacta aaaatctagt tacatcagtg gggatacgat
    13081 ttatactcaa cgaaaatcaa aagtagccta ggaaacgaag tcgaagatag aactggagtt
    13141 catcatggca agttgacaac ggataatttt gattttcgtt gagtattact agtgcacaaa
    13201 tcataaaata cgtatatctt cataccttcg aacaagctga aatataacgc tttaccccca
    13261 cacaccccat aagtttgctc aattcatgag tatgtaaacc aatggcaatc attttggcaa
    13321 tcacgcac
//
LOCUS       DBNFCX010000063        13203 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.063, whole genome shotgun sequence.
ACCESSION   DBNFCX010000063 DBNFCX010000000
VERSION     DBNFCX010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 13203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13203
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.063"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..782)
                     /locus_tag="AC1PJC_001563"
     CDS             complement(<1..782)
                     /locus_tag="AC1PJC_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HIP6620546.1"
                     /translation="MTKDTNEKNTQSSSFRDQILRDLEELKVKRLAEQSADVLVDKRN
                     EIINELQPSLAEEKAPHRETEIVKVEGIAFPDSYLPEEQQESEVMTESIEEPTSETLA
                     TPETFVIEKEVISSPVPQDTVERNLEELRNLVAANTVEFDEAPSSSLVSEPVEPVLSE
                     KSSLEDTFLEFPTEDVSAVTGDTEVISLEETIVATKAVAPVAATEEQMQPTQSRRSSS
                     HRANKQRRKKQDKAAKRIVSVIMSIIVVAVLVTGLTGYMWVKS"
     gene            complement(854..1339)
                     /locus_tag="AC1PJC_001564"
     CDS             complement(854..1339)
                     /locus_tag="AC1PJC_001564"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIP6620547.1"
                     /translation="MEIRFATPSDLEQVVLIENANFSKEERIAESVLAIYLNALSKTC
                     LIMEHDGEIAGYLLSCPSVSQTVTDDIFYLTESDMPTGGHLAIASLSVADTYKGQGVG
                     TLLLAAIKEVALARGFEGIALTCKEYLIGYYEMNQFEDFGPSLSQFGGQMWSDMYWKA
                     L"
     gene            complement(1395..2726)
                     /gene="murC"
                     /locus_tag="AC1PJC_001565"
     CDS             complement(1395..2726)
                     /gene="murC"
                     /locus_tag="AC1PJC_001565"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015511317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HIP6620548.1"
                     /translation="MTKTYHFIGIKGSGMSALALMLHQMGHKVQGSDVEKYYFTQRGL
                     EQAGIQILPFDEKNITADVELIAGNAFRPDNNVEIAYADAQGYTYKRYHEFLGEFMKG
                     FTSLGVAGAHGKTSTTGLLAHVMRNITDTSFLIGDGTGRGSANAQYFVFESDEYERHF
                     APYHPEYSIITNIDFDHPDYFTSLEDVFNAFNDYAKQVKKALFVFGEDEQLRRITANA
                     PIYYYGFEENNDFVAYDLKPSTSGSQFKVRHGEEELGEFQIPTFGKHNVMNATAVIAN
                     LYIAGFDLQLVAEHLKTFGGVKRRFTEKIVNDTVIIDDFAHHPTEIIATIDAARQKYP
                     SKELVAIFQPHTFTRTIALLDEFADALNGADAVYLAQIYGSARETDNGQVKVEDLAAK
                     INKKGGLVTVENTSPLLDHDNAVYVFMGAGDIQSYEYSFERLLSNLTNNVQ"
     gene            complement(2728..3390)
                     /locus_tag="AC1PJC_001566"
     CDS             complement(2728..3390)
                     /locus_tag="AC1PJC_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620549.1"
                     /translation="MIRHENRFPLVADDEVLVGENPIMSLYDESDLISNIRGPYQEKE
                     FSWSTDSQRVASAKPVAQTEDELLPPLFEAKPSHYSRKERLQQLTKTKPSPVKTQGQL
                     AREQAREDLKKKRSATYLRDEKPAPAKVVVKPPVVSTTESKAGRLTRLADNLRQTDYI
                     LADVPAVYSLKKEDREQEQVIKKNSYDFLRKSQVYNYPERRQQRDRQVAQELNLTHIE
                     EE"
     gene            complement(3469..6561)
                     /locus_tag="AC1PJC_001567"
     CDS             complement(3469..6561)
                     /locus_tag="AC1PJC_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140658 - ATP-dependent chromatin
                     remodeler activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SNF2-related protein"
                     /protein_id="HIP6620550.1"
                     /translation="MGRMMPGRIRQEGIDLYEAGKLTVLHSENGKMVLDIAGERFTYG
                     DADSDLQCSCQLFQSKGYCQHLAATEYFLKNDASGKDMKQSLKEDGEQHKETVRRTYF
                     GGLFLDEILRPEPELGIKYQLSVEGSLLPYDRQIDWTLKITRLPDTRSYIVRDIGAFL
                     RIVKANGHYQIGKNYYEQVTYENFDEPSQALLDFLWALVPEKVGIDSDILTHLGRHFR
                     LPQAYFEEGLELLNQLEHFNFSYQQQSYSSLMVLPLTGEEGLYHFEVTVHTQMIEMVI
                     HEKTVRPLFHGRYLLVNGTVYSVNRHQEHLIYQISELVPTESGLRKVQVDFPDQNRLA
                     LSLLDLQTIGTVKAPKRFIIHDFKPEFHVQMEANDSLSLQLVLDFDGRKVRSEEDLAL
                     LPFASHFQHLERVYQAIRLAGFRGTYYAQRAALSQQELYPFFQQQLPILQKMGQVHLA
                     ERLQALYIEAKPQLEIVRNGSLLDISFDLSGIEQFEIDQAITALLNQEDHYTSPSGKV
                     FVFDEETKKISQTLIYLRARHGKEGQVQVHALAGYQLAQSLSQFNQVSFSKEFEEMAS
                     YLAQPDLFPLPAVEVTTSLRDYQQTGLKWLTMLDTYGFGGILADDMGLGKTLQTIAFL
                     SSRMTKDSKVLILAPSSLIYNWLDECKRFAPSLDVAVVHGNKDQREEIIVNGHQVLVT
                     SYPSFRQDVALYRQERFDYLILDEAQVMKNAQSKIAQLLREFEVGNCFALSGTPIENH
                     LTELWSIFQIVLPGLLPGKQDFGKLAAKDIARTIQPFVLRRHKEDVLQELPDLIEVNV
                     LNELTDEQKAIYLAQLQQMRTQIAGADDAQINRSKIEILSGITRLRQICDTPSLFMEE
                     FSGESGKLNSLKELLLQLKEGEHRVLIFSQFRNMLEKIEEQLVEIGMTSYTLTGSTPA
                     NQRQEMTQAFNAGSRDAFLISLKAGGVGLNLTGADTVILVDLWWNPAVEAQAISRAHR
                     MGQTEKVECYRLITRGTIEEKIQELQENKKNLVKTVLDGNESRANLTVEDIREILGIE
                     "
     gene            complement(6701..7009)
                     /locus_tag="AC1PJC_001568"
     CDS             complement(6701..7009)
                     /locus_tag="AC1PJC_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620551.1"
                     /translation="MEFFGELLVEFLTGLADFDEKKHPPFGIRYWLGWLGVLIHVLLL
                     ALLTSVTVFFFKFFLDGKGLINVVVAVVFLLFALFWLWKSGKTILKMWQATIYYLAIH
                     "
     gene            complement(7011..7349)
                     /locus_tag="AC1PJC_001569"
     CDS             complement(7011..7349)
                     /locus_tag="AC1PJC_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIP6620552.1"
                     /translation="MVAFPIWRLLFLLLSISAFYFIFYEGSQYKPFGLRYWLGLVACI
                     WLNLVTLASYFIAFTGGSIMVYNRFEQPTVLLFIFFLVCAIVLSLLSLHAMKTLVRRT
                     KYYRQVRKVG"
     gene            complement(7424..8734)
                     /gene="der"
                     /locus_tag="AC1PJC_001570"
     CDS             complement(7424..8734)
                     /gene="der"
                     /locus_tag="AC1PJC_001570"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018377046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HIP6620553.1"
                     /translation="MALPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYA
                     TGEWLNRKFSLIDTGGIDDVDAPFMEQIKHQAEIAMDEADVIVFVVSGKEGVTDADEY
                     VSRILYKTNKPVILVVNKVDNPEMRNDIYDFYSLGLGDPYPVSSVHGIGTGDVLDAII
                     ENLPAQEAEENPDIIKFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTHFT
                     DPEGQEFTMIDTAGMRKSGKVYENTEKYSVMRAMRAIERSDVILMVINAEEGIREYDK
                     RIAGFAHEAGKGMIIVVNKWDTLEKDNHTMKQWEDDIRDQFQYLSYAPIIFVSALTKQ
                     RLHKLPEMIKAISESQNTRIPSAVLNDVIMDAIAINPTPTDKGKRLKIFYATQVATKP
                     PTFVVFVNEEELMHFSYMRFLENQIRKAFVFEGTPIHLIARKRK"
     gene            complement(8753..9466)
                     /locus_tag="AC1PJC_001571"
     CDS             complement(8753..9466)
                     /locus_tag="AC1PJC_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003041432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent oxidoreductase"
                     /protein_id="HIP6620554.1"
                     /translation="MNETIDLMLNHTSVRRFTEEPIEAEHLQAIISAGRAASSWKNFQ
                     SYSIIVVQSEEKKQALYDLVPQPAILQAQAILVFVGDHNRASKAAQLHGSDFDAKGTE
                     NLLISSVDASLAGQNALLAAESLGYGGVFIGMIRHKAMAIAELFNLPDYTYPIFCIAL
                     GRPAQNHPVKPRLESEAIVFQEEYVEQDVEVIQAYDQVQTAYAGARQTETWSERMVAQ
                     FGQPEQPETKSILEKNKLL"
     gene            complement(9463..10362)
                     /gene="dnaI"
                     /locus_tag="AC1PJC_001572"
     CDS             complement(9463..10362)
                     /gene="dnaI"
                     /locus_tag="AC1PJC_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein DnaI"
                     /protein_id="HIP6620555.1"
                     /translation="MKSVQDRLSQATNPSPKSYQQLYQEIVSDPEVAAFIKKEGLTQQ
                     EITLSISKFLEYISQRDLFVKQDESYIAKGYQPVLVMNEGYADVSYLETEELVEYRRL
                     EAIKNRIQLINMPASLKNVTVADIDKSDENRVEVMLAIADFVKRFEEKPKGLYIYGNF
                     GIGKSYLMAYLANLLSKTHLQSTTMLHYPTFVVDIKNAIKDGSVKERIDEIKMAQVLV
                     LDDIGAEQHSPWVRDDVLQVILQYRMQENLPTFFTSNFSFDDLERHFASGKSGDETWQ
                     AKRVMERIRYLARDLHLKGNNRR"
     gene            complement(10362..11513)
                     /locus_tag="AC1PJC_001573"
     CDS             complement(10362..11513)
                     /locus_tag="AC1PJC_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation/membrane attachment
                     protein"
                     /protein_id="HIP6620556.1"
                     /translation="MKPNDLFAYIKISPFTPDIVSLSQCYQPIIGFDALALYYYFYSF
                     ADQGQGRYKWTVILNHMDFGMNRLEKALDVLTAMGLLELYRADELTGLALQAPLTVKS
                     FLAKPLYKNLLARKIGESSMENLLVHLPNQEQNISKTFSQVFTMDGQAPVVFEPKHDF
                     DWSAFKALMAKDKLLFQDEAEDIIALSYIAEQAGWTWLETYRQAKATAIGQTISTKRL
                     QQSRQSLPTENANLTAQEQAIVREAKSKSSLTFLSFIKEQRKAAVTGTERKCLTDLAN
                     LGLLDEVINVLVLYTFNKVDSANLNEKYAMKLGNDFSYKGIGSAEAAVLYLRELKTGQ
                     VVTKSSQPQKSNVPEWSKEEVQQGQTQEGQAKLAALYRELEEMENKGGS"
     gene            complement(11500..11991)
                     /gene="nrdR"
                     /locus_tag="AC1PJC_001574"
     CDS             complement(11500..11991)
                     /gene="nrdR"
                     /locus_tag="AC1PJC_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HIP6620557.1"
                     /translation="MRCPKCQSLKSSVIDSRQAEDGNTIRRRRSCDQCGQRFTTYERI
                     EEKTLVVVKKDGTREQFSREKIFNGIIRSAQKRPVSTDDIDEVVNRIEQKVRAQGDSE
                     IESDVIGNLVMEELVELDEITYVRFASVYRSFKDVGELENLLKQMISKGSKVKPGKKD
                     ETK"
     gene            complement(12063..13193)
                     /locus_tag="AC1PJC_001575"
     CDS             complement(12063..13193)
                     /locus_tag="AC1PJC_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HIP6620558.1"
                     /translation="MNTSFKEKVILILLSGATLLAVLNWSSIYGAIQQLLGSMNSLFI
                     GAIFAFILNVPMKKLEDQFEKISFLKKSKRSLAIVGVLIGFALIVTGLVVIVLPTLVT
                     TVSELVSVSSTAIPKSVNALTNFLESNGLLSGQIGDQIASFLDQLKNLTLISSLVTPI
                     LSGLVSNVTGIFSNTMTLIMAFFFTLAILGSKEHLQAMTRKFLQATLPEKAVRVVNYI
                     GEVIVDTYDRFLMSQIVEACIIGTLVFVSYSLSGIPYASMAGILAGVLSFVPYIGPFS
                     ACLISALFVAVQNPLLALWSIALFQIIQLIEGNVIYPRVVGQSVGLPTLFTLAAALIG
                     GNLFGLLGMVFFTPIFAVVYRLVREWVASRLKKQDELLVESE"
BASE COUNT         3794 a         3086 c         2538 g         3785 t
ORIGIN      
        1 gattttaccc acatatagcc agtaagacct gtcactagaa ccgccactac aataatcgac
       61 atgataacag agacaatgcg tttagcggct ttatcctgtt ttttgcgacg ttgcttgttt
      121 gctctgtgcg acgatgatcg tctagactgt gttggttgca tctgctcttc tgtcgctgca
      181 actggagcta ctgccttcgt tgcaacaatt gtttcttcca gtgagataac ctctgtatca
      241 cccgttacag ctgatacatc ttccgttgga aattccaaaa atgtatcttc caaagaagac
      301 ttctctgaaa ggacaggctc aactggttcg gaaaccaatg agcttgatgg agcctcatca
      361 aattctacag tattagcagc tacaaggttt cgtagctctt ccaagttccg ctccaccgta
      421 tcttgaggaa ccggacttga aatgacttct ttttcaatca caaaagtctc tggagtagcc
      481 aaagtttctg atgtcggctc ttcaatactt tccgtcatca cttctgattc ttgctgttct
      541 tctggcaagt atgaatcagg gaaagcaata ccttctactt ttacaatttc agtctctcta
      601 tggggggctt tttcttcggc aagactaggc tggagctcgt tgataatttc gttacgctta
      661 tcaacaagaa catccgctga ttgttccgcc aaacgtttca ccttcaattc ttccaaatct
      721 cgtaaaattt gatcgcggaa gcttgaagac tgcgtgtttt tttcattcgt atcctttgtc
      781 acgctgttac tcctttcaca cagttactat acattatatc ttaaaggctt atgaattgca
      841 agaacttccc tttctacaag gctttccagt acatatcact ccacatttgt cctccaaatt
      901 gcgacaagga ggggccaaag tcttcaaact ggttcatttc atagtagcca atcaaatact
      961 ccttacaggt tagagcaatg ccttcaaatc ctctcgctaa agccacttct tttatggctg
     1021 ccaacaaaag agttcccact ccctgtccct tataggtatc cgctacggat agactggcaa
     1081 tagctaggtg accgcctgtc ggcatatcac tctctgtcaa gtaaaaaata tcgtctgtaa
     1141 cagtctgcga aacagaagga caggataata aataacctgc tatttcccca tcgtgttcca
     1201 ttattaaaca ggttttactc aaagcattca gataaatggc aagaacagac tcagctatcc
     1261 gttcctcttt agaaaaattg gcattttcaa tcaaaacaac ttgttctaaa tccgaaggag
     1321 tagcaaaacg aatttccata attttctccc ttatatagcg gaaaaacagg ggccataggc
     1381 ctccgtcttt ctttttattg gacgttattt gtgagatttg acaagagtct ttcgaaggag
     1441 tattcatagg actgaatatc accagctccc ataaatacat atactgcatt gtcatggtct
     1501 aaaagtggtg aagtgttttc aactgtaaca agtccacctt ttttgttgat tttagccgcc
     1561 aaatcttcta ccttaacctg accattgtct gtttcacgcg ctgagccata aatttgagca
     1621 aggtaaactg catctgctcc attcaaagca tctgcaaact catcgagaag cgcaatggta
     1681 cgagtgaatg tatgtggttg gaagatggct accaactcct tgctaggata cttctgacgt
     1741 gccgcatcaa tggttgcaat gatttccgtt ggatggtgag caaagtcatc aatgataaca
     1801 gtatcattga caattttctc cgtaaagcga cgtttgacac ctccaaatgt cttcaagtgt
     1861 tctgcaacca gttgcaaatc aaatccagca atatagagat tggcaataac agctgttgca
     1921 ttcatcacat tatgcttacc aaaggttgga atttggaatt ctcccaactc ttcttcacca
     1981 tggcgaactt tgaattgtga accacttgta gaaggcttca agtcataggc aacaaaatcg
     2041 ttgttttcct caaaaccata gtaataaatt ggagcatttg ccgtgatacg acgaagttgc
     2101 tcatcttcac caaaaacgaa gagagctttt tttacttgct tcgcataatc attgaaagca
     2161 ttgaagacat cctctagact ggtgaaataa tctggatggt caaaatcaat attggtaatg
     2221 atgctgtatt caggatggta tggggcaaag tgacgctcgt attcatcgga ttcgaacaca
     2281 aaatactgag catttgccga accgcgacca gtaccatcac caatcaagaa ggaagtatct
     2341 gtgatattgc gcataacatg tgccaataat cccgttgtag aggtcttacc atgggcacca
     2401 gcaacaccga ggctcgtaaa acctttcata aattcaccta gaaattcatg gtaacgtttg
     2461 taggtatagc cctgggcatc agcataagcg atttccacat tgttatctgg acgaaaagca
     2521 ttaccagcaa tcaattcaac atctgctgta atatttttct catcaaacgg taaaatctga
     2581 atcccagctt gttcaagccc acgttgtgta aagtagtatt tctctacatc actaccttga
     2641 accttatgcc ccatttgatg caacataaga gcaagtgcgc tcatacctga tcccttaatt
     2701 ccgataaaat gataggtttt tgtcatgtta ttcctcttct atatgtgtca aattcaattc
     2761 ttgtgccact tggcgatctc gttgttgtct gcgctcagga taattgtaaa cctgactctt
     2821 tcttaaaaag tcatacgaat ttttctttat aacctgctcc tgttctctat cttctttctt
     2881 caaagaatag acagctggca catcagcgag aatatagtct gtctgacgta agttgtccgc
     2941 caaacgtgtc aaccgacctg ccttagattc agttgttgaa acgacaggag gtttcaccac
     3001 aactttagct ggtgctggtt tttcatctct taagtaggtt gctgatcgtt ttttcttcaa
     3061 gtcttctcta gcctgttcgc gagccaactg cccctgtgtt ttcactggag aaggcttcgt
     3121 tttagtcagt tgctgaaggc gttccttgcg agaataatgg cttggcttag cttcaaacag
     3181 aggaggcagg agctcatctt ccgtttgtgc tactggtttt gccgacgcaa ctcgctgtga
     3241 atcggtagac cagctaaatt ccttttcttg ataaggtccc ctgatattgc taatcaggtc
     3301 gctctcatca tataaactca taattggatt ttctccaact agtacctcat catctgcgac
     3361 tagtggaaat ctattttcat gtctaatcat aagtcatcct ttcgaaccct tattatacca
     3421 tacttaggcc ttatttccta attctacgct gagtcaactg attccatatc actcaatccc
     3481 taaaatctca cgaatatcct caaccgtcaa attcgctcgg ctttcattgc catcaaggac
     3541 tgttttgaca aggttctttt tattttcttg caattcttga atcttctctt cgattgtccc
     3601 tctagtaatc aggcgatagc attcaacctt ttcagtctgc cccatgcgat gagctcgact
     3661 gatagcctga gcttccacgg caggattcca ccaaaggtcg actaggatga ctgtgtctgc
     3721 acctgtcaaa ttcaagccaa cgccacctgc tttcaaggaa atgagaaagg catctcgact
     3781 tcctgcattg aaggcctgtg tcatttcttg gcgttggtta gcaggtgttg aaccagtcaa
     3841 agtataggat gtcatcccaa tttctaccag ctgttcttct attttttcca gcatatttct
     3901 gaattgggag aatatcaaga ccctgtgttc accttctttt agctgcaaga gtaattcttt
     3961 caaactatta agtttgccac tctcaccact aaactcttcc atgaaaaggc tgggggtatc
     4021 gcagatttga cgtaagcgag taattcctga taggatttct atcttgctac gattgatttg
     4081 agcatcatct gcgccagcta tttgagtccg catttgttga agctgggcta ggtagatggc
     4141 tttttgttca tcagttagtt cattaagtac attgacttct atcaaatcag gcaattcctg
     4201 aagaacgtct tccttatgac gtctgagaac gaagggttga atggtccgcg caatgtcctt
     4261 ggctgctaat ttaccgaagt cttgtttgcc tggcaataaa cctggtaaga caatttggaa
     4321 aatggaccag agttccgtca aatggttttc aatcggagta cctgagaggg caaagcaatt
     4381 cccaacctca aactcacgca gtagctgtgc aatcttagat tgggcattct tcatgacctg
     4441 cgcctcatct aaaatgaggt agtcaaagcg ttcctgtcta tagagtgcaa catcctgtct
     4501 gaaggatgga taggaggtaa ctaagacttg gtgaccattg acaatgatct cttcacgctg
     4561 gtccttgttt ccatggacaa cagccacatc taaacttgga gcaaaccgct tgcactcatc
     4621 taaccagtta taaatcaagc tagacggtgc caatattaaa actttggaat cttttgtcat
     4681 ccgactggac agaaaggcga tagtttgtaa ggtctttcca agccccatgt cgtcagctaa
     4741 aattccgcca aaaccatacg tatccagcat agtcaaccac ttaagccctg tctgctgata
     4801 atccctaagc gacgttgtta cttccacagc aggaagcggg aacaaatctg gctgagctag
     4861 atagcttgcc atttcctcaa attccttgga gaaactgact tggttgaatt gtgacaagga
     4921 ttgagccaat tggtaaccgg caagagcatg gacttgtacc tgcccctcct taccatgacg
     4981 ggcccgcaga tagattaggg tttgactgat tttcttggtt tcctcatcaa aaacaaatac
     5041 cttaccgctc gggctagtat agtgatcctc ttgattcaac aaggctgtaa ttgcctgatc
     5101 gatttcaaat tgttcaatac ctgataagtc aaacgaaata tccaaaagtg agccgttacg
     5161 cacaatttct aattgaggtt tggcttcaat atataaagcc tggagccttt ctgctagatg
     5221 aacctgcccc attttttgta atataggcaa ttgttgttgg aaaaatggat agagctcctg
     5281 ctgactaaga gccgctctct gggcataata tgtcccccta aagccagcta aacgaatagc
     5341 ctgatagacc ctctccaaat gttggaaatg gctggcaaaa ggcaggagag ccaaatcctc
     5401 ttcactcctt accttacgtc catcaaaatc caaaaccaat tggagtgata aactgtcatt
     5461 tgcctccatc tgaacatgaa attctggctt gaaatcatga atgatgaagc gtttaggtgc
     5521 cttaacagtc ccaattgtct gcaaatccag caagcttaaa gccagacgat tttggtcagg
     5581 gaaatccacc tgcacttttc tcaaacctga ttcggttgga acaagttcgg aaatttggta
     5641 aatcagatgt tcttgatggc gattgacact ataaaccgtg ccatttacta agagatagcg
     5701 cccatgaaaa agaggtcgga ctgttttttc gtgaataacc atttcaatca tctgcgtgtg
     5761 aacggtcacc tcaaaatgat agagcccttc ctcccctgtc aacggaagaa ccatcaagga
     5821 ggaataggac tgctgttgat aggaaaagtt aaaatgttct agctgattta acagctccaa
     5881 cccctcctca aaataggctt gtggcagacg aaaatgtcgt cccaaatgag taagaatatc
     5941 cgaatctata ccaactttct ctggtaccaa ggcccagaga aaatccagga gagcctgact
     6001 tggttcatca aaattttcat aagtaacttg ctcataataa tttttaccta tctgatagtg
     6061 accgttggct ttcacaatgc gcaaaaaagc tccgatgtcc cgcacaatgt acgaacgtgt
     6121 atctggcaag cgggtaattt tcaaggtcca atctatctga cgatcatagg gcaataagct
     6181 cccttcaact gataactgat acttaatccc caattcaggt tctggccgca aaatttcatc
     6241 taaaaagaga ccgccaaaat atgtccgacg gacggtttcc ttatgttgtt caccatcttc
     6301 tttcaaagac tgcttcatat ccttgcctga ggcatcattt tttaaaaaat actccgtggc
     6361 agctaggtgt tgacagtagc ccttactttg aaataactgg caactacact gtaaatcgct
     6421 atctgcatcg ccgtaagtaa agcgctcacc agcaatatcc agcaccatct ttccattctc
     6481 actatgaaga acagtcagtt ttccagcctc gtacaaatca attccttctt ggcgaatccg
     6541 ccctggcatc atgcgaccca ttctaactcc tttatccttc aaccaatcat cagctcttct
     6601 gtaaaatata tctaaaatat tatcttttca ttatagcata ttttcaattt gaattgttta
     6661 aataggtatc aaaaaaacac cagctggtaa actggtgtct ctaatgaata gctaaataat
     6721 aaatcgttgc ttgccacatt ttcaagattg tttttccgct tttccaaagc caaaatagag
     6781 caaatagcag gaaaacaact gccactacta cgttaatcaa gccttttcca tccaagaaaa
     6841 acttgaaaaa gaagacagtc acactagtaa gcaaggcaag gagtaaaaca tgaatcagaa
     6901 ctcccaacca gcccagccaa tagcgaattc caaagggagg gtgtttcttt tcatcgaagt
     6961 ctgctagacc agtcaaaaac tcaactagca actcaccaaa aaattccata ctagcctacc
     7021 tttcttacct gtcggtaata ctttgttcgt cggacgaggg ttttcatcgc atgtagggac
     7081 aggaggctga gtactatagc acacaccaaa aagaagatga aaagcaaaac cgtaggctgt
     7141 tcaaatcggt tatagaccat aattgaacca ccagtaaagg cgataaaata ggatgccaaa
     7201 gtcaccaaat taagccaaat gcaagccacc agtcccagcc aatatcgaag accgaaaggt
     7261 ttgtactgac taccttcata gaaaataaaa tagaaagctg agatagaaag caatagaaat
     7321 aacaatcgcc aaatcggaaa cgctaccata aaatcacctc ctagtcccat tctatcatat
     7381 ttacaaataa ttacaaataa aaaagaggtt aaacctctct ttcttatttc cgttttcggg
     7441 cgatcaagtg aattggtgtt ccttcaaaaa caaaggcctt gcggatttga ttttccaaga
     7501 aacgcatata ggagaagtgc atgagctctt cttcgttgac aaagaccaca aaggtcggtg
     7561 gtttggtcgc aacctgagtc gcatagaaaa tcttgagacg tttacccttg tcagtcggtg
     7621 ttggattgat ggcaattgcg tccatgatga catcgttgag aacagccgac ggaatacggg
     7681 tattctggct ttcgctaatg gccttaatca tctcaggcaa cttgtgcaag cgttgcttgg
     7741 tcaaggctga cacaaagata atcggtgcgt aagacaagta ttggaactgg tcacgaatat
     7801 cgtcttccca ctgcttcatg gtatggttgt ctttttcaag cgtatcccac ttgttgacca
     7861 cgataatcat ccccttacca gcttcatgag caaagcctgc gatgcgtttg tcgtactcac
     7921 ggataccttc ttcagcattg ataaccatca atatgacatc cgagcgttca atggcacgca
     7981 tggcacgcat aacagagtat ttctcggtat tttcatagac cttaccagac ttgcgcatcc
     8041 ctgcggtatc aatcatggta aattcttgac cttctgggtc tgtaaagtgc gtatcaatag
     8101 catcacgagt cgttcccgca acaggcgacg caatcacgcg ctcttcaccc aaaatagcat
     8161 taatcaaact tgatttacca acgtttggac gaccaatcaa gctgaacttg ataatatctg
     8221 gattttcttc tgcttcctga gctggtaggt tttcaatgat agcgtccaag acatcccctg
     8281 ttccgatacc gtgtacagaa gatactggat aaggatcgcc aagaccgagt gaatagaaat
     8341 cgtaaatgtc attacgcatt tcagggttat cgactttatt gacaaccaaa ataactggtt
     8401 tgtttgtctt ataaaggata cgcgatacat actcgtcagc atccgtcaca ccttctttgc
     8461 cagatacgac aaagacgatg acatctgctt catccatggc aatctcagcc tgatgcttga
     8521 tttgctccat gaaaggtgca tccacatcat caataccgcc tgtatcaatc aaggaaaact
     8581 tacggttgag ccactcacca gtagcataaa tacggtcgcg ggtcacacct tcaacgtctt
     8641 ctacgataga aatgcgttcc cccgcaatac ggttaaatag tgttgattta ccaacgttgg
     8701 gacggccaac gatggcgata gttggtagag ccatagctcc tcctcttcta gtttacaata
     8761 atttattctt ttctaagata gactttgttt caggctgctc tggctgacca aactgagcaa
     8821 ccattcgctc agaccaggtt tctgtctgac gggcacctgc ataggctgtc tgaacttggt
     8881 cgtaggcttg gattacttcc acgtcttgct ccacatattc ttcctgaaag acaatggctt
     8941 cgctttccaa acgcggttta acaggatggt tttgggctgg tcgacccagg gcaatgcaga
     9001 aaattggata ggtataatct ggcaagttga acagctctgc tattgccatg gccttatggc
     9061 gaatcatacc gataaagacg ccaccgtaac ctaggctttc agctgctaaa agggcatttt
     9121 gccctgctag gctcgcatca acagaagaaa tcaggagatt ctctgttcct ttggcatcaa
     9181 agtctgaacc atggagttga gccgccttgc tggcacgatt atggtcgccc acaaaaacca
     9241 gaatagcctg agcctgtaaa atagctggct gaggcaccaa atcatagaga gcctgttttt
     9301 tctcctccga ctgcaccaca atgatggaat aagactggaa attcttccag ctagacgcag
     9361 ctcgcccagc tgaaataata gcttgcaaat gttccgcctc aataggctcc tccgtaaaac
     9421 gacgtacgga agtatgattc aacatcaaat caatggtttc attcatcggc ggttatttcc
     9481 tttcaaatgc aaatcgcgag ccagatagcg aatccgctcc ataacccgtt tggcctgcca
     9541 ggtctcatca ccagacttgc cagaggcgaa atgacgctcc aaatcatcaa aggagaaatt
     9601 ggaggtaaag aaggtcggca gattttcctg catgcggtat tgaaggatga cctgtagaac
     9661 atcgtcacgt acccacggac tatgttgctc cgctccgatg tcatctagca ccaagacctg
     9721 agccatcttg atttcatcaa ttcgctcctt gacagaacca tctttgatgg cattttttat
     9781 gtctaccaca aaggttggat aatgaagcat agtggttgat tgaagatggg tcttggacaa
     9841 aagattggct aaataagcca tcaaataact ttttccaata ccgaaattgc catagatgta
     9901 gaggcctttt ggtttttcct caaatcgttt gacaaaatct gcaatagcca gcatgacttc
     9961 cacacgattt tcatcgctct tatcaatatc cgccactgtt acattcttca aactcgccgg
    10021 catattgatg agctggatac ggttcttgat ggcttccaaa cgacggtatt cgaccaattc
    10081 ttctgtctca agataggaaa catccgcata gccctcgttc atgactaaaa ccggttgata
    10141 gccttttgca atataggatt catcctgctt gacaaagagg tcacgctgac tgatatattc
    10201 caaaaactta gaaatggaga gggtgatttc ctgctgggtc aaaccttctt ttttgataaa
    10261 agcagcgact tcaggatcac tcactatctc ctgatagagt tgctgataag attttggact
    10321 tggattggtt gcctgcgaca acctgtcttg aactgatttc atcagctacc tcctttgttt
    10381 tccatttctt ctaattcacg ataaagagcc gccagcttgg cttgaccttc ctgcgtttgt
    10441 ccttgctgaa cctcttcctt actccactca ggcacattgc ttttctgtgg ctggctcgac
    10501 ttggtaacaa cttgacctgt cttcaactct cttaggtaaa gaacagctgc ctctgcactg
    10561 ccaattccct tgtaggaaaa atcattgccc agcttcatag cgtatttttc atttagattg
    10621 gctgagtcca ccttgttaaa ggtatagagg accaagacat tgatgacttc gtcaagcaga
    10681 cccaaattgg ccaaatccgt caagcatttt cgttctgttc ctgtcaccgc tgccttgcgt
    10741 tgctccttga taaaggacag gaaggttaga ctggattttg atttcgcttc acgaacaatt
    10801 gcttgttctt gggcagtgag gttggcgttt tctgttggca atgactgacg tgactgctgc
    10861 aagcgtttgg tcgagatcgt ctgtccaata gctgttgctt tagcctgccg ataggtttcc
    10921 aaccaggtcc accccgcctg ctctgctatg taactaagcg caataatatc ctcagcttca
    10981 tcctgaaaaa gaagcttatc tttagccatt aatgccttga aggcagacca gtcaaaatca
    11041 tgtttcggtt caaaaacaac tggagcctgc ccgtccatgg taaagacctg agaaaatgtt
    11101 tttgaaatat tttgttcctg attgggtagg tgaacaagca gattctccat gcttgactcc
    11161 ccaatcttcc ttgccaacaa gttcttatac aagggtttcg ctagaaaact ttttacggtc
    11221 agaggggctt gtagcgccaa acctgttaat tcatctgcac gatagagttc tagaagcccc
    11281 atggcagtca gaacatccag agccttctcc aaacgattca tcccaaaatc catgtgattg
    11341 agaatgacag tccatttgta acggccttgc ccttgatcgg caaaactata aaagtaataa
    11401 taaagcgcta atgcatcaaa accgataatc ggctggtagc attggctaag actgacaata
    11461 tcaggtgtaa acgggctgat ttttatatag gcaaataaat catttggttt catctttttt
    11521 tcccggtttt accttacttc ctttggaaat catctgctta agcaaatttt ctagctctcc
    11581 aacatctttg aaagaacgat aaaccgatgc aaaacgcaca taggtgattt catccaattc
    11641 gaccaattct tccattacca aattcccaat gacatcggat tctatttcac tatcaccttg
    11701 tgctcgcacc ttctgttcaa tccgattcac cacttcatca atatcatcgg ttgacacagg
    11761 gcgcttttga gcagaacgaa taatcccatt gaaaatcttt tcacgtgaaa actgctctct
    11821 agtcccgtct tttttcacaa cgactagagt tttctcttca atccgttcat aggtggtaaa
    11881 acgttgacca cattggtcgc aggaacgacg acgacggatg gtattgccat cttcagcctg
    11941 acgactatca atgacacttg atttcaaact ctgacatttt ggacaacgca tactctttct
    12001 cctacataaa ctttatcact tcagtatagc ataaaaatga caaaaataaa agaaagcgag
    12061 aattactcac tttctaccaa taattcatct tgcttcttca atcgactggc aacccattca
    12121 cgaaccaggc ggtagacaac cgcaaagata ggtgtaaaga agaccatacc aagtaggcca
    12181 aacaaattac caccaatcaa ggctgcagcc agggtaaata gggtcggaag accaactgat
    12241 tgaccaacca cacgtggata gataacattt ccttctatca gctgaataat ctggaaaagg
    12301 gcgatagacc agagtgccaa gagcggattt tgcaccgcca caaagagagc actaatcaaa
    12361 cacgctgaaa agggaccgat ataaggtaca aatgatagga cccctgccaa aataccagcc
    12421 atgctggcat aaggaattcc tgagagcgaa taactaacaa agacaagtgt cccaatgata
    12481 cacgcctcaa caatctgact catcaagaat cggtcatagg tatcaacaat aacttctcca
    12541 atatagttca ctactctgac agccttctct ggcaaggtag cctgcaagaa ctttctcgtc
    12601 attgcctgca agtgttcctt gctccctaaa atcgctagag tgaagaagaa agccattatc
    12661 aacgtcatag tgttcgaaaa aatccccgtc acattggaca ccaagccaga taaaatcggt
    12721 gtgaccaaac ttgaaataag tgttaaattc ttcaactgat ccaaaaagct ggctatctgg
    12781 tctccgattt gtcccgacaa aagaccattt gattcaagaa aattagttag ggcatttacc
    12841 gattttggaa tggctgtgct gctaaccgaa accagttctg aaacagtcgt caccaatgta
    12901 ggaagaacaa tcaccaccag tcctgtcaca attaaagcaa atccaattaa tactccaaca
    12961 attgccaaag accgcttgga tttctttaaa aaagaaattt tttcaaactg atcttctaat
    13021 tttttcatgg gaacattgag aataaaggca aaaatagctc caataaaaag cgaattcata
    13081 ctgcctaata attgttgaat agccccataa atactagacc agttgagaac agctaacaat
    13141 gtcgctccag ataagagtat caatatgact ttttctttaa atgacgtatt cataatatct
    13201 cca
//
LOCUS       DBNFCX010000064        13140 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.064, whole genome shotgun sequence.
ACCESSION   DBNFCX010000064 DBNFCX010000000
VERSION     DBNFCX010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 13140)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13140)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13140
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.064"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            181..1080
                     /locus_tag="AC1PJC_001576"
     CDS             181..1080
                     /locus_tag="AC1PJC_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HIP6620559.1"
                     /translation="MDHKIIERKSLTVSSVVNGLSGLAGIAVYIMTDLNALLLDGVFS
                     LIAFISSLVAVYISKNSHRKTETFPQGLYFLEPLYAIMKSLATLLLLVFAVLETSATA
                     FAYFVHGIGHQMTTGPVLPYTITMFFVCMGLYLYNRHMSAKVNHLSTIILAEAKGNLV
                     DGLISGAIGIAILLLYLVPINSWLGFLHYTGDFFLTLALAIISFKEPWNLLVASFKEL
                     ANGTIHFPEIHDSIYQLLEPYLKEDSNDVEIHIFKQGMKIRVKINLHNVHHEIIQKLL
                     EDKPQMLYLLKKHHEYISIEYAL"
     gene            complement(1097..1450)
                     /locus_tag="AC1PJC_001577"
     CDS             complement(1097..1450)
                     /locus_tag="AC1PJC_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase family protein"
                     /protein_id="HIP6620560.1"
                     /translation="MILFYEYPKCSTCRAAKAELKSLGLEFEAIDIKSTPPSAEELKV
                     WMEATGLELKKYFNTSGNSYRELGLKDKFDSLSLEQALNLLANDGMLIKRPLLIQDGK
                     ILQIGYRTKYENLGL"
     gene            complement(1434..1940)
                     /locus_tag="AC1PJC_001578"
     CDS             complement(1434..1940)
                     /locus_tag="AC1PJC_001578"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HIP6620561.1"
                     /translation="MLYKQIYHSPLGPMSLIASDKGLRGAWFEGQKYFERGLNEKAIL
                     ASHPILDQTARLLDQYFSGAQVDFSSLPLEAVGTNFQEHVWQLLKTIPIGQTTTYGQL
                     AQQLGLRSGQAVGGAVGRNPYSIIVPCHRVLNQKGQLTGYAGGLDKKIWLLRHENPEF
                     EVKDDFIL"
     gene            complement(1943..3124)
                     /locus_tag="AC1PJC_001579"
     CDS             complement(1943..3124)
                     /locus_tag="AC1PJC_001579"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoglycerate dehydrogenase family protein"
                     /protein_id="HIP6620562.1"
                     /translation="MVFSVRTFNNINQIGLKELGNKFQIDGDHAANPDAFIIRSENLH
                     GFDFPENLKAIARAGAGTNNIPIEEATEKGIVVFNTPGANANAVKEAVIASILLSARD
                     YIGATAWANTLSGDDVPKQVEAGKKQFAGTEISGKTLGVIGLGAIGARIANDARRLGM
                     NVLGYDPYVSVETAWTISSHVKRVDDLKEIFTNADYITVHVPLTDKTRGLFNADSFGQ
                     MRKGTTLINFARGELVNNADLFEAIEAGVIKNYITDFGTEEVLNKDNIIVFPHVGGST
                     EEAELNCAIAAGQTIRRFMETGEIINSVNFPNVKQFLDAPYRITLINKNIPNMVATIT
                     TAVSELGINIDNIINKSKGDYAYTLLDLDEADKVKIEQLVAKFEVTDAIVKVRVIQNK
                     N"
     gene            complement(3498..4055)
                     /locus_tag="AC1PJC_001580"
     CDS             complement(3498..4055)
                     /locus_tag="AC1PJC_001580"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIP6620563.1"
                     /translation="MEIRLAHPNEMEAIVNILEDARAFLATSGINQWQGEYPNKENIF
                     DDILSGRGYVGIVDGKVAAYAAVHRGQEAEYEAIYEGKWQHNHPVYTTFHRIAAADEF
                     RGQGIIQTFLQGLIEGQKGPDFRCDTHEQNKTMQHILKKLGYVYCGKVPIDGERLAYQ
                     KIKQKSERSLYQEISEDDRWLLGNN"
     gene            complement(4055..5146)
                     /gene="serC"
                     /locus_tag="AC1PJC_001581"
     CDS             complement(4055..5146)
                     /gene="serC"
                     /locus_tag="AC1PJC_001581"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HIP6620564.1"
                     /translation="MTIYNFSAGPAVLPKPVLERAQAEFLDYNGSGMSVLEMSHRSKD
                     FDDIIKGAEATLRELMAIPDNYKVIFLQGGASLEFTMIPLNFAQGKKAYYLVGGSWGK
                     KAYTEAVKLSKTIAFEPILLGSTEDITYAELPTFDKNDIDPTAAYVHLTTNNTIEGTA
                     VYDIPDTNGVPVIADMSSNILAARYNVEDFAMIYAGAQKNIGPAGVTVVIVREDFLND
                     QPMLSSMLDYRIQAENDSLYNTPPAYSIYISKLVFEWVKEIGGVDEMEKINREKSGLL
                     YDYIDQSNFYTNPVRKKEERSVANIPFVSPSEELDAKFVKEATAAGFKNIKGHRSVGG
                     MRASLYNAFPRQGVVELIEFMKKFAAENA"
     gene            complement(5502..6365)
                     /gene="rsmI"
                     /locus_tag="AC1PJC_001582"
     CDS             complement(5502..6365)
                     /gene="rsmI"
                     /locus_tag="AC1PJC_001582"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HIP6620565.1"
                     /translation="MKVQKSFKGQTSFGTLYLVPTPIGNLQDMTFRAVQILKEVDIIA
                     AEDTRNTGLLLKHFEVETKQISFHEHNAHEKIPILIDWLKSGQSIAQVSDAGLPSISD
                     PGHDLVGAAIAEDIPVVALPGASAGITALIASGLAPQPHIFYGFLPRKSGQQKEFFQE
                     KKTYPETQIFYESPYRVADTLENMLTVYGDRQVTVVRELTKLYEEYQRGSISELLEYL
                     EENPLKGECLIIVEGAGEEVYPSADEVDLKAEVEREIASGIKPNQAIKEVAKRYQLKK
                     QEVYDIYHGLG"
     gene            complement(6367..6684)
                     /gene="yabA"
                     /locus_tag="AC1PJC_001583"
     CDS             complement(6367..6684)
                     /gene="yabA"
                     /locus_tag="AC1PJC_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication initiation control protein YabA"
                     /protein_id="HIP6620566.1"
                     /translation="MDKKEIFDALDDFSQNLLTTLAEVDAIKKHLQGVIDENTTLRLE
                     NSKLRERLEKEDKTGHKSSNFGKENLENIYEDGFHICTFSYGQRRDNDEPCMFCVELL
                     NRD"
     gene            complement(6704..7588)
                     /locus_tag="AC1PJC_001584"
     CDS             complement(6704..7588)
                     /locus_tag="AC1PJC_001584"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HIP6620567.1"
                     /translation="MKIEELRNLQPSVFQRFVTILEQRRLAHAYLFSGDFASFDMAIF
                     LSQSLFCQEKEGVLPCQKCRSCRLIEANEFSDLTVIAPQGNVIKTDTIRELVKNFSQS
                     GFESNKQVFIIRDAEKMHANAANSLLKVIEEPQSAIHIFLLTNQEEAVLPTIKSRTQI
                     IGFPKNIPAMERMLEEEGLLKTQANLLAQLVSSQEEAKKLAENKNFLDLMGQTKKFTD
                     LLLVEPTRAYLQVGILVSLAVEKAEQGRLFDLLSLILSEKMMESANVREKMDAVLKAK
                     KMWQANVSLQNSLEYITL"
     gene            complement(7585..8223)
                     /gene="tmk"
                     /locus_tag="AC1PJC_001585"
     CDS             complement(7585..8223)
                     /gene="tmk"
                     /locus_tag="AC1PJC_001585"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - dTMP kinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006233 - dTDP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HIP6620568.1"
                     /translation="MRNGFFITFEGPDGAGKTTVLQQLLPALQELGPEVVTTREPGGV
                     AIAEEIRNIILNPANTEMDDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSS
                     IAYQGFGRGLDIDDIHWLNQFATDGLKPDLTLYFDIDTEEGLARIARNADRDVDRLDM
                     EKADMHRRVRQGYLSILEQEPERFVKIDASQPLEAVVADALAVIKKRFAERT"
     gene            8398..9264
                     /locus_tag="AC1PJC_001586"
     CDS             8398..9264
                     /locus_tag="AC1PJC_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HIP6620569.1"
                     /translation="MVRLKNILLILLGAGLFAFGLNYLIMPNRLFEGGATGLTLIIYY
                     LFHIQPWIMNIVINIPLFILGWKILGKKTLYLSILGTFSVTFWLAIFEKIHFSINLQQ
                     DLILVSILGGILMGLGLGTIFRAGGTTGGSDIIARIGHKFLPYSIGQIILAVDILILT
                     LIVIVFKDLRTVLYTLMMVAIASKVIDFVTEGGYGSKGVMIVSQKSDQLAQAIDCEIE
                     RGVTFIKAQGFYSKADVNMIYSVIYKSQLQEMKELIHRIDPHAFITITDAHEVLGEGF
                     TLDRDKKPIERH"
     gene            complement(9302..10573)
                     /locus_tag="AC1PJC_001587"
     CDS             complement(9302..10573)
                     /locus_tag="AC1PJC_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxic anion resistance protein"
                     /protein_id="HIP6620570.1"
                     /translation="MSGFNFDIDQIANNSLSTKDKTTELIQATPTGDNSKVSFLAQLT
                     PEQQTGIRAKAPQLVDNFLANQNALLDFGKEAVEEVNATVNHILSEQKKIEIPQVDEL
                     LANTNRELNGFVAKYKDISTTAELEKKPGFFQRLFKQTKNDLQEFYFDSQTIEKKMDS
                     MAASVVKQEEVLARNIVSAELLIENNTKSIENLVGVIAFIEATGQEAAERAKLAQENL
                     ATLVPTTVDYQVASEKLARVTEVANILEQQHSEYMSRLYVAWTTTPQMRNLVKVSSDM
                     KQRLGMLRRNTIPTMKLSIAQLGILQQSIKSSQTADAIVNANNAALQMLADTSKEAIP
                     MMERTAQNPTLSVASVTKLAESLVAQNNGIIAAIDEGRQKRRELEAAIVRSAETINDS
                     VKLRDQKIIAALLEQGKVAQSEAEQPLETNQ"
     gene            complement(10579..11406)
                     /locus_tag="AC1PJC_001588"
     CDS             complement(10579..11406)
                     /locus_tag="AC1PJC_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620571.1"
                     /translation="MGHKYKKYKKYGKNNSGLVALLVLLAIGFVMSFWYILLPIGLLI
                     GYFYKREAIQRFLNRDFIKRLQVLALSIRSGYEKHQELLVEEGEDKVVLQLRNRLLGQ
                     LFELDQLYQKVGKYLNGYESKEVVDTLQLKYHLKLPEAKTERNTDTQVSTGSNAVMDD
                     QGMIADLAPEILETYCNIQRDNLVILEKLEKATDKREELTAIHEANMNRFNDILQGYL
                     KIKKSPKDYFNAEERLVQAKSAMEMFDKDLDDTIKQFNEADMKDFEVSLRMMKREEE"
     gene            complement(11500..12156)
                     /locus_tag="AC1PJC_001589"
     CDS             complement(11500..12156)
                     /locus_tag="AC1PJC_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HIP6620572.1"
                     /translation="MSVKDFMTRKVVYISPDTTIAHAADIMREQDLHRLPVIENDKLV
                     GLVTEGTIAEASPSKATSLSIYEMNYLLNKTKVKDVMIKNVITVSGYASLEDAAYLMY
                     KNKVGILPVVDNGQLYGVITDRDIFAAFLHVSGYGEEGVRARFLVENKAGELEKIIRL
                     VADKDYNIVSTVQLATKSGKVVIEVQIDGKVDVEEVRTLFEGAGIQVDSLVPTVAKNI
                     "
     gene            complement(12240..12995)
                     /locus_tag="AC1PJC_001590"
     CDS             complement(12240..12995)
                     /locus_tag="AC1PJC_001590"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0052693 - epoxyqueuosine reductase
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HIP6620573.1"
                     /translation="MIKVEEILSTLSPNQKVNYDKVFQKMASTWQEAGLRPNILMHVC
                     CAPCSTYTLEYLTQYADVTIYFANSNIHPKAEYQRRAAVTAQFVKEFNQKTGQSVGYL
                     EADYSPQEFFKKTQHLANEPEGGDRCKVCYDYRLDKTAEKAVELGFDYFGSALTISPH
                     KNSQTINAVGIEVQKLYDTQYLPSDFKKNGGYQRSVQMCEEYDIYRQCYCGCVYGANA
                     QGVNLVQVKKEALEFLKTHRDYSHIPFKVLDKN"
BASE COUNT         3769 a         2951 c         2298 g         4122 t
ORIGIN      
        1 atgatttcaa ttatcagata acagatatta aaggcttaaa acccataggt ctattgcaag
       61 ggttttgagc ctttatttct tatcactcta cctctctacc ttgttttaat ccgctcaatt
      121 tgaaagcggt gtcattttgt ggtaaaataa atatatagat atacattaaa aggagggatt
      181 atggaccaca aaattatcga acgcaaatct ctaactgttt cctctgttgt gaacggttta
      241 tctggactag caggtattgc cgtttatatc atgactgacc taaacgccct cctcctagac
      301 ggagtctttt ctctaatagc atttatttcg tccttagttg cagtttacat atcgaaaaat
      361 agccatcgga aaaccgagac ttttcctcaa ggactgtatt ttctagaacc tctctacgct
      421 atcatgaaat ctctcgcaac tctactactc cttgtatttg ctgtacttga aacaagcgcg
      481 acagcctttg cttactttgt tcatggaatc ggtcatcaaa tgactactgg tcccgttctc
      541 ccttatacca taaccatgtt ttttgtctgt atggggcttt acctatacaa ccgccatatg
      601 agtgccaaag tcaatcatct gtctactatc atattagcag aagcaaaagg caaccttgta
      661 gacggactca tttcaggtgc aattggaatt gcaattcttc tgctctatct tgttcctatc
      721 aactcttggt taggcttcct gcattatact ggtgacttct ttttgacact agcactagca
      781 atcatttcat ttaaggaacc ttggaactta ttagtggcat ctttcaagga acttgccaac
      841 ggaacaatcc atttccctga gatacatgat tctatctatc agctattgga gccttactta
      901 aaggaagata gcaatgatgt tgaaatccat attttcaaac aaggcatgaa gattcgcgtt
      961 aaaatcaatc tccacaatgt ccatcacgaa attatccaaa aactcttaga agataagcct
     1021 cagatgctct atcttttgaa aaaacatcat gaatatattt caatagaata tgcgctataa
     1081 taaacaaaat ctcggcttat aaaccgagat tttcgtattt tgttcgatag ccaatctgta
     1141 agattttacc atcctgaatt agtaggggac gcttaatcag cataccatca ttagctagaa
     1201 gattaagtgc ctgctccaag ctaagactat caaacttatc tttcaagcct aattcacgat
     1261 agctattacc agaagtatta aaatactttt tcaattctag tcctgttgcc tccatccaaa
     1321 cttttagctc ttcagcacta ggcggtgttg acttaatgtc aatagcttca aattccaatc
     1381 ccaagctctt cagctccgcc tttgctgctc ggcaagtcga acattttgga tactcataaa
     1441 ataaaatcat ctttcacctc aaattctgga ttctcatgtc gcaagagcca gattttctta
     1501 tccagtccac ctgcataacc tgtcaactgt cctttctgat tgagaactcg gtgacaagga
     1561 acaataatag aataaggatt acgcccaact gcacctccta ctgcctgacc agaacgaagg
     1621 cccagttgct gagccagttg tccataggta gtcgtctgac caatcggaat cgtcttcaat
     1681 aattgccaga catgctcttg gaaatttgtt cccacagctt ctaatggaag gcttgaaaag
     1741 tccacctgag cccctgaaaa atactggtca agcaatcgag ctgtctggtc taaaatggga
     1801 tgggaggcta aaatagcttt ctcattcaag cctcgttcaa aatatttttg tccctcaaac
     1861 caggcccctc tcaatccctt atcactagca attaatgaca tggggccaag tggactgtga
     1921 tagatttgtt tatacagcat gattagtttt tattctgaat gacacgcact ttgacaattg
     1981 catccgttac ttcaaattta gcaaccaact gctcaatttt cactttatcc gcttcatcca
     2041 aatcaagtaa agtataggca tagtcacctt tagacttatt gatgatatta tcgatattga
     2101 ttcccaactc agatacagcc gttgtgatcg ttgccaccat attaggaata ttcttattaa
     2161 tcaaggtaat acgatacggt gcatctagga attgtttcac atttgggaag ttaaccgagt
     2221 tgataatttc acccgtctcc ataaaacgac gaatggtctg accagcagca atggcacagt
     2281 tgagctctgc ttcctctgtt gacccaccaa cgtgcgggaa gacgataatg ttgtccttgt
     2341 tgagcacttc ttctgtccca aaatccgtga tatagttctt gataactcct gcctcaattg
     2401 cttcaaacaa atcagcatta ttaaccaatt cacctcgtgc aaagtttatc aaggttgttc
     2461 cttttctcat ttgaccaaaa ctatccgcat tgaagagtcc tcgtgtctta tctgtcaaag
     2521 gaacatgaac agtaatgtag tccgcattgg taaagatttc tttcaagtca tccacacgtt
     2581 tgacatggct tgaaatggtc catgcagttt ctactgatac ataagggtcg taaccgagaa
     2641 cattcattcc caaacggcgg gcatcgttgg caatacgcgc accgatagca ccaagtccga
     2701 taacaccaag agtcttacct gaaatttctg tcccagcaaa ctgcttctta cctgcttcaa
     2761 cctgcttagg tacatcatct cctgacaatg tatttgccca tgcagtcgct ccgatatagt
     2821 cacgtgctga caaaagaatg gaagcaatga ctgcctcttt tacggcattg gcattggcac
     2881 ctggagtgtt aaagacaaca atacctttct ctgttgcctc ttcgattgga atattgttag
     2941 tccctgcacc agcacgggca atagctttta gattttcagg aaaatcaaat ccatgcaaat
     3001 tttcagatcg aataataaag gcatctggat ttgctgcatg atctccgtca atctggaatt
     3061 tattgcccaa ttccttaaga ccaatttgat tgatattgtt aaaagtacgt acgctaaata
     3121 ccatttattt ttacctaaaa aggggagtgg gaaagaactc acttaactac agaagggttc
     3181 gtcaacaagt ctttatttct agttgctgag ctgaaacagt ctattcccag actgtttcac
     3241 tcccaccccc gcacagctca aactgtctgg gagacagttt aaggttggag ataaggcgaa
     3301 ctctgttcgc atcagtcgta gtggtcagat ttggagtgta aaacacgaac tgctgagatt
     3361 tgcttcgcaa atcttatctc caacctttaa cagtccactg gactgttaaa cccaatcaac
     3421 cactgtgctg agatgttgac ccgaaccttg agaagtgata tgaagctttt gcccggtcct
     3481 tttctttctt tatttcatta attatttccg agtaaccaac ggtcgtcttc actgatttcc
     3541 tggtaaagac tccgctcgct cttttgcttg attttttgat aggctagacg ttctccatct
     3601 attgggactt taccacaata gacatagcct aattttttta gaatgtgctg cattgtctta
     3661 ttctgctcgt gggtatcaca gcggaaatcc ggtccttttt gaccttcaat taaaccttgc
     3721 aaaaaagttt gtatgattcc ttgaccacga aattcgtcag ctgctgcaat tctatgaaat
     3781 gttgtatata caggatgatt atgctgccat tttccttcat atatggcctc atattctgct
     3841 tcttgaccac gatgaacggc ggcataagct gccaccttac cgtcaactat accaacgtaa
     3901 cctctgccag aaagaatgtc atcaaagata ttctctttat taggatactc tccctgccat
     3961 tgattgatac cggaggttgc tagaaatgca cgagcatctt caagaatatt gacaatagcc
     4021 tccatctcat ttggatgtgc taatctaatt tccattaagc attctccgct gcaaattttt
     4081 tcatgaattc aatcaattca accacacctt gacgtgggaa agcattatag agcgacgccc
     4141 gcatcccacc tactgaacgg tgacctttga tgtttttaaa accagctgct gttgcttctt
     4201 tgacaaactt ggcatctaat tcttcacttg gtgagacaaa aggaatgttc gctactgaac
     4261 gctcttcttt tttacgaaca gggtttgtat agaaattaga ctggtcgata tagtcataaa
     4321 gcaaaccaga tttttcacgg ttgatttttt ccatctcatc aacaccacca atttctttta
     4381 cccattcaaa gacgagttta gaaatataga tagaataagc tggtggcgta ttataaagag
     4441 agtcattttc tgcttgaata cggtagtcca acatgcttga aagcattggt tgatcattga
     4501 ggaagtcctc acgaacaatc accaccgtca caccagcagg accaatattt ttctgagcgc
     4561 cagcataaat catggcaaaa tcttcaacat tatagcgagc cgctaagatg tttgaagaca
     4621 tatcagcaat gactggcaca ccattggtgt caggaatatc ataaactgct gttccttcaa
     4681 tagtgttatt tgttgtcaaa tgcacgtaag cagcagttgg atcaatatca tttttatcga
     4741 aggttggcaa ttctgcatag gtaatatctt ccgttgatcc aagcaaaatt ggttcaaagg
     4801 caattgtttt agacagcttc acagcctcag tataggcttt tttaccccat gagccaccta
     4861 caagatagta ggccttcttg ccttgagcga agttgagggg aatcattgtg aattccaaag
     4921 aagctccacc ttgcaagaaa ataaccttgt aattatctgg aatggccatc aattcacgaa
     4981 gcgttgcctc agcaccttta ataatatcat cgaaatcctt ggagcgatgc gacatctcca
     5041 aaacactcat tcccgaacca ttgtagtcca agaattcagc ttgggcgcgt tcaagtactg
     5101 gttttggcaa tactgcagga cctgcagaga agttgtagat tgtcataaaa tccctccatt
     5161 aagttagtct gttcattata tcacaaatat tcagacaatt ccataaaata tgattatttt
     5221 gtaaaaatat tcggatttct tatatttatt ctactttcta aagcacctct tacttttagc
     5281 cataaacgag gcgcttgcct cacagggatt tatcaggttt caatgaaaat cagaaagtag
     5341 cctaggaaac gaagccgaag atagaactct gttactttct catttcaagg taacagactg
     5401 aaaagatcca ctggagcttt tcactcatca aggctcttga caacggataa ttttgatttt
     5461 cgaagagtat aagcttgcat aaacatacaa aaaactaggc cttaacctag tccatgatat
     5521 atatcgtata cttcttgttt tttgagttgg tagcgtttgg ccacttcttt gatagcctga
     5581 ttaggtttga tgccacttgc aatttccctt tctacctcag ccttcaagtc cacttcgtca
     5641 gcagaaggat agacttcctc accagcaccc tcgacaataa tcaagcattc tcccttaagt
     5701 ggattttctt ccaaatactc tagtaattcg gaaatgcttc ctctctggta ttcttcgtat
     5761 aacttggtca attctcgaac aaccgttacc tgacgatcac cataaactgt caacatattt
     5821 tctaaggtat ctgccacacg atatggagat tcatagaaaa tttgcgtctc aggataggtc
     5881 tttttttctt gaaaaaattc tttttgctgc cccgattttc tcggtaaaaa tccataaaaa
     5941 atatgtggct ggggtgccaa accagatgca atcaaggctg taattcccgc cgatgctcct
     6001 ggaagtgcta caacaggaat atcttccgca atcgctgccc ctaccaggtc atgaccagga
     6061 tccgaaatgg aaggcaagcc tgcatcagaa acttgcgcaa tggactgacc agatttgagc
     6121 caatcaatca aaattggaat tttttcatgg gcattgtgtt catgaaagga tatttgcttg
     6181 gtttctactt caaaatgttt gagtaggagg cctgtatttc tcgtatcttc cgctgcaatt
     6241 atatccacct ctttcaagat ctgaacagct cgaaatgtca tatcctgtaa gtttccaata
     6301 ggcgttggca ccagatataa agtcccaaaa ctcgtctgtc ccttaaatga tttttgtact
     6361 ttcatcctaa tctcgattca ataattctac acagaacata caaggttcat cattatccct
     6421 acgttgacca taagagaagg tacaaatatg gaaaccatct tcgtaaatat tctccaaatt
     6481 ctccttacca aagttggaag acttatggcc tgtcttatct tctttttcca aacgttcacg
     6541 caacttggaa ttttccaagc ggagggtcgt attttcatca ataactccct gtaaatgctt
     6601 tttgatagca tccacttctg ccaacgtggt tagaagattc tgcgaaaaat catctagggc
     6661 atcaaaaatt tcttttttat ccattatctc cctttctttt attttacaga gttatatact
     6721 ctagactatt ttgtagactt acgtttgcct gccacatctt cttagcctta agaacagcat
     6781 ccattttttc acgtacgttt gccgattcca tcattttctc agataatatc agactcagaa
     6841 ggtcaaacaa acgtccctgc tcagcttttt ccacagctaa agacactagg attccaactt
     6901 gcaaataagc acgtgtaggc tccaccaaga gcaagtctgt aaatttcttt gtctgtccca
     6961 tcaaatctaa aaagttttta ttttctgcta actttttcgc ttcttcttga cttgaaacca
     7021 gttgagctaa gagatttgct tgtgttttta acaagccctc ctcttctaac attcgctcca
     7081 tggccggaat atttttagga aaacctataa tctgtgtccg actcttgata gtaggaagga
     7141 cagcttcttc ctgattggtc aataagaaga tgtgaatggc tgactgaggt tcttcaatca
     7201 cttttagcaa agagttggct gcgttagcat gcattttctc agcatcacga ataatgaaaa
     7261 cctgcttatt ggattcaaat ccagattgtg aaaaattctt aactaattca cgtatcgtat
     7321 ctgttttgat aacatttccc tgcggtgcaa taacagtaag atctgaaaac tcatttgctt
     7381 caattaggcg acaagaccga cacttctgac aaggaagtac gccttctttc tcctgacaaa
     7441 ataacgattg actgagaaaa atagccatat caaaactagc aaagtcacct gaaaatagat
     7501 aggcatgtgc caaacgtctc tgctctaaaa ttgtcacaaa acgttgaaat acactgggtt
     7561 gtaagtttct aagttcttca atcttcatgt tctttctgca aaccgtttct taatgaccgc
     7621 cagagcatct gcaacaacag cctctagtgg ctgactggca tcaatcttta caaaccgctc
     7681 tggttcctgc tctaaaatac taagatagcc ttgacgcacc cgtctatgca tatctgcttt
     7741 ttccatatcc aagcgatcca catcacggtc agcattgcgg gcaattcgag ccagcccctc
     7801 ttctgtatca atatcaaaat agagggttaa atctggcttt aaaccatctg ttgcaaactg
     7861 gttaagccaa tgaatgtcat ctatatccaa gccccgtcca aatccttgat aggcaataga
     7921 agaatcgata aaacgatcaa tcaagagcaa tttcccctgt gccaagggtg gaagaatctt
     7981 ctctttcaaa tgctgacgtc gtgctgcaat gaacaataac agctccgtct tatcatccat
     8041 ttcagtattg gcaggattga gaattatatt gcgaatttct tctgcaatag ccaccccacc
     8101 tggctctcta gttgtgacta cttctggccc caattcctgc aaggctggca ataactgttg
     8161 caataccgtt gttttccctg ccccatctgg accttcaaat gtaataaaaa aaccgtttct
     8221 catctttccc tcgctcttag taccagtatg aacagttcag cacttcactt gtgaagactg
     8281 gttcttagat attcattcca ttttaccaaa aattagtcaa aaaatcactt gaaaattgac
     8341 ttgtttttaa ggagaaaatc ttttaaaatt gatatataca catattcgga gatgcttatg
     8401 gttcgtttga aaaatatttt acttattttg cttggtgcag ggctatttgc ctttgggcta
     8461 aattatttaa tcatgcccaa tcgtctattc gagggtggcg caactggatt gacgctgatt
     8521 atttactacc tctttcatat tcaaccttgg ataatgaaca ttgtgattaa tattccattg
     8581 ttcatcctcg ggtggaaaat actcggaaag aagactctct atctcagtat cttaggaacc
     8641 tttagcgtta ccttttggtt ggctattttt gaaaaaatcc atttttcaat caatctacaa
     8701 caagatttga tactcgttag tatccttggt gggattctta tgggactagg attaggaacc
     8761 atcttccgtg cgggcggaac gactggggga agcgatatta ttgctcgtat aggtcataaa
     8821 ttcctacctt actccattgg acaaatcatt cttgcagttg acatccttat cctaactctg
     8881 attgttattg tttttaaaga cctccgaaca gttctatata ctttaatgat ggttgctatt
     8941 gcttccaagg ttattgattt tgtcacggag ggcggatatg gtagcaaggg ggttatgatt
     9001 gtttctcaaa aatctgacca attggctcag gctattgatt gtgaaatcga gcgtggtgtc
     9061 acctttatca aagcacaagg tttctacagc aaagccgatg tcaacatgat ttactcggtc
     9121 atatataaga gccaactcca agagatgaag gagcttattc accgcattga cccccacgca
     9181 tttatcacca ttacagacgc acatgaagta ctcggtgagg gatttacttt agatcgagat
     9241 aaaaaaccaa tagaacgcca ttaaacaaaa cctgcagttt cgctgaactg caggttttat
     9301 attattgatt ggtttcaagt ggttgctctg cctcagactg tgctactttg ccttgctcca
     9361 gcaaagcagc aatgattttt tgatcgcgta gcttaacaga atcattgata gtctctgcag
     9421 accgtacaat ggctgcttcc aactcccgac gtttctgacg cccttcatct atagctgcaa
     9481 taatgccatt attttgcgca accaaacttt ctgccaattt ggtaacagat gctactgaaa
     9541 gggtcggatt ctgagctgtg cgttccatca tcgggatggc ttcttttgat gtatccgcaa
     9601 gcatttgaag ggcagcatta ttagcattga caatcgcatc tgccgtctgg ctagacttga
     9661 tagattgttg taagatgccc aactgtgcaa tggacaattt cattgttgga atagtattgc
     9721 gacgtaacat cccaaggcgc tgtttcatat ccgaagaaac cttgaccaga ttacgcatct
     9781 gcggtgtcgt tgtccacgcg acatacaagc gactcatata ctcagaatgt tgttgttcga
     9841 ggatattagc aacctctgtt acacgtgcta acttctcaga agctacttga taatcgactg
     9901 tagtcggtac taaagttgcg aggttttctt gtgccaattt tgcacgctct gctgcttcct
     9961 gaccagtcgc ttcaataaag gcgatgaccc ccaccaaatt ctcgatagac ttggtattat
    10021 tttcaatcaa aagctctgca gaaacaatat tgcgcgccaa cacctcttcc tgcttgacca
    10081 cactggctgc catgctatcc attttctttt caatggtctg cgaatcaaaa taaaattcct
    10141 gcaaatcatt tttggtctgc ttgaacaggc gttggaagaa acctggtttc ttttctaatt
    10201 cagcagttgt ggaaatgtcc ttatacttag ccacaaaacc attcaattca cggttggtat
    10261 tggccaaaag ctcatcgacc tgtggaattt caatcttctt ctgttctgac aaaatgtgat
    10321 tgaccgtggc attgacttct tctaccgctt ccttaccaaa atccaagagg gcattttgat
    10381 tagctaagaa attatccacc aattggggag ccttggcacg aatacctgtt tgttgttccg
    10441 gtgtcaactg tgccaagaaa gacacttttg aattatctcc agtcggagtc gcttgaataa
    10501 gctctgttgt cttatctttg gttgataaac tattattagc aatctgatca atatcgaaat
    10561 taaatcctga catcttctct attcctcttc tcttttcatc atacgcagac tgacttcaaa
    10621 atctttcata tccgcttcgt taaattgttt gatggtatca tccaaatcct tatcaaacat
    10681 ttccatggct gattttgcct gcaccaatcg ttcttctgcg ttaaaataat ctttcggtga
    10741 ttttttgatt ttcaaataac cttgtaaaat atcattaaac cgattcatat tggcctcatg
    10801 gatagctgtc aattcttccc gcttatctgt cgccttttcc agcttttcaa gaataacaag
    10861 attgtctctt tgaatattac aataggtttc tagaatttca ggagctaaat ccgctatcat
    10921 accttgatca tccatcacag cattactacc agtagaaacc tgtgtgtcag tatttctttc
    10981 tgttttagct tctggcagtt ttaaatgata ttttagttgc aaggtatcta caacttcttt
    11041 actttcatat ccattcagat attttccaac tttttgatag agctgatcta attcaaataa
    11101 ttgtcctaac agtctgtttc gcaactgtaa cacaacctta tcctcaccct cttccaccaa
    11161 gagctcttga tgcttttcgt agcccgaacg aatagatagc gctaatacct gcaagcgttt
    11221 tataaaatct ctattcaaaa aacgctggat agcctctctc ttgtaaaaat agccaattaa
    11281 gagcccaata ggcaataaga tataccagaa actcatgaca aaaccgattg ccaataaaac
    11341 aaggagggcc acaagtcctg aattattttt accatatttc ttatactttt tatatttgtg
    11401 ccccatagag cctcctcata cgtgatatac tttattatat cacattcccc taaaatacta
    11461 gaatgatagc taaagaaaaa aaccgagaaa tctcggtttt taaatatttt tagcaacagt
    11521 cggaaccaag ctatccactt ggatacctgc accttcgaaa agagttcgaa cttcttcaac
    11581 atcaactttt ccgtcaattt gcacttcgat gacaactttt ccagacttgg tagcaagttg
    11641 cacagtagat acaatattat aatccttatc tgccaccaat cgaataattt tttctaactc
    11701 ccctgcctta ttttcaacaa ggaaccgagc gcgtactcct tcttctccat aacctgagac
    11761 atgaagaaaa gctgcaaaaa tatcacgatc agtaatgacc ccatatagtt gaccgttgtc
    11821 aacaactgga agaatcccca ctttgttttt atacatgaga taagcagcat cttcaagact
    11881 agcataacct gagactgtga taacattctt aatcatcaca tccttgacct tagtcttatt
    11941 caaaaggtag ttcatctcgt aaatagatag gctagttgcc ttcgatggac tagcttctgc
    12001 gatcgttccc tcagtgacca aaccaaccaa cttatcattt tcaataacag gtagacggtg
    12061 caaatcctgt tcacgcataa tatctgcagc gtgtgcaatg gttgtatctg gtgaaatata
    12121 aacaacttta cgggtcataa aatctttaac agacatagga cttcctcctt tggtaaatca
    12181 tactttatta taccataaat tcgaaaacga tttcaatatt taatgaaaag aaatgaaaat
    12241 caattcttat ccagcacctt gaaaggaatg tgggaataat ctctgtgcgt ttttaaaaat
    12301 tccaaggctt ctttttttac ctgtacgaga ttgacacctt gggcattggc tccatagaca
    12361 cagccacaat agcactggcg ataaatgtca tactcttcac acatttgaac tgaacgctga
    12421 tagcctccat ttttcttaaa gtcactcgga agatactggg tatcgtataa tttctgcacc
    12481 tcaatcccaa cagcattgat ggtctgcgaa ttcttatgtg gactgattgt caaagctgaa
    12541 ccaaaatagt caaaaccaag ctcaactgcc ttctccgcag tcttatccaa ccgataatca
    12601 tagcaaacct tacaccgatc tcctccctct ggctcattgg caagatgctg agttttcttg
    12661 aaaaattcct gagggctata gtcagcttct aggtagccta ctgactgtcc agttttctga
    12721 ttaaattctt tgacaaactg ggccgtcacg gctgcccgcc gctggtactc cgcctttgga
    12781 tgaatattgg aattcgcaaa atagatggtt acatctgcat attgagtcaa gtactccaat
    12841 gtataggtcg agcatggggc acaacagaca tgcatgagaa tgttcggtcg aagccccgct
    12901 tcctgccacg tgcttgccat tttttgaaac actttatcat agttaacctt ttgattcggt
    12961 gatagagtcg ataaaatctc ttcaacttta atcatacaaa cctccaatta tacattcatt
    13021 atactatatt tgaagcctac tgcatagata gtaataacga gggagagcgc ttgataagga
    13081 tccctatttc cacctaaaaa ggtcccccag accttgatat aaagaaaaac gcctctcggc
//
LOCUS       DBNFCX010000065        12778 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.065, whole genome shotgun sequence.
ACCESSION   DBNFCX010000065 DBNFCX010000000
VERSION     DBNFCX010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 12778)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12778)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12778
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.065"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            88..1470
                     /gene="glmU"
                     /locus_tag="AC1PJC_001591"
     CDS             88..1470
                     /gene="glmU"
                     /locus_tag="AC1PJC_001591"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006048 - UDP-N-acetylglucosamine
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HIP6620574.1"
                     /translation="MSNNYAIILAAGKGTRMKSDLPKVLHKVAGITMLEHVKRAVDAM
                     EPAKTVTIVGHKAELVQAVLEGQSEFALQSEQLGTGHAVMMAEPALAGLEGQTLVIAG
                     DTPLITGESLKNLINFHVSHKNVATILTAQADNPFGYGRIIRNADGEVQKIVEQKDAN
                     DFEKQVKEINTGTYLFDNKRLFEALKDINTDNAQGEYYLTDVISIFRQAGEKVGAYVL
                     RDFDESLGVNDRVALATAEAVMRKRINEKHMVNGVTFINPDATYIDIDVEIGAEAVIE
                     ANVVLKGQTVIGERTVLTNGTRVRDAKIAADAVISNSDIEESVIEEGVTVGPYAHIRP
                     GSLLKKDVHVGNFVEIKASTLGQGTKSGHLTYLGNATIGNNVNVGAGTITVNYDGKNK
                     FKTTVGDNAFVGSNSTIIAPVTIGDNALLAAGSVITKDIPEDAIGIGRGRQENKEGYA
                     TRFPFHPSQK"
     gene            1479..2024
                     /locus_tag="AC1PJC_001592"
     CDS             1479..2024
                     /locus_tag="AC1PJC_001592"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016817 - hydrolase activity, acting on
                     acid anhydrides [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009132 - nucleoside diphosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HIP6620575.1"
                     /translation="MNFEEKTIERTEIFKGHIFDVVVDDVALPNGGTGKRELIFHKGA
                     VCVLAVTPEGKMILVKQYRKAIERTIYEIPAGKLELGEEDTLEDAALRELEEETGYTS
                     DKLILLADFYSAIGFCNERIRLYLADNLIKVENPRPMDEDEVIELHEVTLEEALNLVA
                     TGDICDAKTIMAIQYLQLMRK"
     gene            2035..2355
                     /gene="macP"
                     /locus_tag="AC1PJC_001593"
     CDS             2035..2355
                     /gene="macP"
                     /locus_tag="AC1PJC_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall synthase accessory phosphoprotein
                     MacP"
                     /protein_id="HIP6620576.1"
                     /translation="MGKPLLTDEILEKVKKKQYSDQSSQFGHYRPNQDISMDDALFDP
                     YLEEDYQGYEEGQTIRIPVKPTVVKSRRIETIKREAFRSKVNKILFWVIILLIMFIIA
                     VLFI"
     gene            2364..3053
                     /locus_tag="AC1PJC_001594"
     CDS             2364..3053
                     /locus_tag="AC1PJC_001594"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008782 - adenosylhomocysteine
                     nucleosidase activity [Evidence IEA];
                     GO_function: GO:0008930 - methylthioadenosine nucleosidase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009164 - nucleoside catabolic process
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HIP6620577.1"
                     /translation="MKFGIIAAMPQELKILVEHLQDATETDVLGRTYYQGRIGQHEVV
                     LVQSGIGKVMSAMSVAVLADRFSVDVIVNTGSAGAVAEGIAIGDVVVANQLAYHDVDV
                     TAFGYAYGQMAGQELYYPADQVLLEQLRTVLAEQEMISHVGLIVTGDSFIAGQERIAT
                     IKTHFPEVLAVEMEGAAIAQAAVNTGKPFLVIRAMSDTAQGDANITFDEFIIQAGERS
                     AQTLIAFLEKN"
     gene            3250..4098
                     /locus_tag="AC1PJC_001595"
     CDS             3250..4098
                     /locus_tag="AC1PJC_001595"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008478 - pyridoxal kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009443 - pyridoxal 5'-phosphate salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine kinase"
                     /protein_id="HIP6620578.1"
                     /translation="MVQRLLLANDLPGVGKVALATSIPIAAACQVETILLPTVLLSSH
                     TGGFPDVVVEDMTDLNQAYFEQWKNLNLELAGILSGYCRNPQQLSQLAMYAKQTETPL
                     IVDPVMGDGGKLYTGFTSTYVDAMKELIQSAKLILPNITEASLLTGRNYLGDSYDIHD
                     IEDLVKSLAEQVSADIVLTGISFDDSQIGVAYFQQETGEITTYMSKKYPANFFGTGDI
                     LSTLLAVATIQQINLHQAIPLALDFIDKSLECTLALDRDLKFGISFEPFLAALQQAFQ
                     TLKENL"
     gene            4095..4625
                     /locus_tag="AC1PJC_001596"
     CDS             4095..4625
                     /locus_tag="AC1PJC_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HIP6620579.1"
                     /translation="MKQNQLRQLTEISLFAALICVVVFFIRIPFGSQFVHLGNALVVV
                     GVLIFGAKKGALAASLGLGIFDLLSGYASVAWITILESLIVCFVLHLFYEKFLQANDS
                     LSNIMFVGIVAALTKIILNLLKYTLTGSLVGGLTPSASFLAALGRILGTYGTAITTII
                     AVPILYQVCKKLYKRK"
     gene            4971..9203
                     /locus_tag="AC1PJC_001597"
     CDS             4971..9203
                     /locus_tag="AC1PJC_001597"
                     /inference="COORDINATES: protein motif:HMM:NF033902.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpaH/EbpB family LPXTG-anchored major pilin"
                     /protein_id="HIP6620580.1"
                     /translation="MKFLRKLLAGLLVVFVTLASGSLETVAWSPYTDFPDQSLREWAT
                     KDSNYVASDLPAPPAIANTVDMADMFHYPQLIYTGSISDDAVQTGKLAKNRSYVTDID
                     TSVAVITRDARWQSGVMWSLEENKIKLNEPFQMVSYVYLGNRTQYDKNFNGLGGADGI
                     TFTMHNDKKSVADMQAGNKIGSGDLSNTGINAYGALGNGLGVYGSNFSANVSSEKNNM
                     VDFWRGVENGITLEFDTFFNDNDTTQHSDNDLTSIIYNENHSNTQYGHIAINLLNDFK
                     NNRANYNKEPDKTANKHKIKLSLGWDGEVADKANPYSWNLSNWPTSSLADGRWHRLEV
                     TWTPDTTSNTGNLNYTIYKQGHEGSRNIEYSDDRSKDGTDVLSYDVSIGTGDYSLEKV
                     FGISDLNHTVYWGFSGSTGGFLNNQAVQMVQLPISYYNVELRKEDQDGNLVSDAIFEI
                     EKKNPDTGEWIPLEFYNPRTGRTVSQISTGSHRFYQGVVGEEGILKLSQLTEGTYRWK
                     EIAAPEGYQLDQVYYPNEDGFVVNYSESLKENAFVYTATNKKLYQLELIKTDADTGQA
                     INDVPFVISKIENDISHYLKIKADNTGFDWTRIEGEAKQFLSGKSYSIGADGQVSEQI
                     GEDGKISIQYFPDASNLFWKEVSVPIGYNSKTILSGAFTTVADNKYSYTASQRNERLF
                     QINLEKKGSDTNAALQGAVFALQEKVGSEWIPVSYSGKTEFTTNLEGKISIPNLAAGQ
                     YRWEEKQAPVGYQLSQQYYPNENGFVVAYREGLEVDQVYHNYIFDTTTVTNQPKDFEL
                     FLEKKSSTFQRPLENVEFKLYSTRNGDTFSGELARVRTNSEGKIVFGKDILKADKTYY
                     LVESQTIDGFIRLEGYFTITTSKTDGINITYTKADGEEDSRPFEFTRADDTIYKGTLA
                     VYNKRKSILPITGGNGIVPYIVIGGSLTILALLFFTRKRFVKWLFVIIIATTGLIGQN
                     TRIFAQEQGQVTIEVNRLIYPVTDTHYKSGSPVAGAYLEIVDVTNEFYDLVHLKSLSR
                     LGAQETLSKAQNAQGEKVGQAVTDDKGKAYFTVEKISRDHPAVYLIRETVTPVAVTPM
                     EPLVVVLPLLDDQGKERSQISVYPKAQGTFTFDKTIDGKRASYSLGEPIHYRLSTILP
                     QDIVNLASYELEDVYDVGLEFISESLRVSIDGQEQAGLIESISQSENRFKLSFDIAKL
                     AQFGGKTLDLTYNMVITDEAAIDQPLINTATLYPGDLTPLVDREQVITGGFRFIKQKA
                     GGNKDPLANAKFIIKHPANQTILTYKEGRYQFEKVAPEEKDVVQLTSDAQGHFEIKGL
                     SYGTYLLSEIQAPSGYILNENPTTFTISTSTFTKGPILSIYNVEKPRIQLPKTGTAAT
                     SLAAIGLLCLVSSIMMNRSRCSSKKEKYNEKV"
     gene            9190..10728
                     /locus_tag="AC1PJC_001598"
     CDS             9190..10728
                     /locus_tag="AC1PJC_001598"
                     /inference="COORDINATES: protein motif:HMM:NF033902.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpaH/EbpB family LPXTG-anchored major pilin"
                     /protein_id="HIP6620581.1"
                     /translation="MKKFKFFALLATLLVSTFSSLLTPFVSADETEKVSITLHKVKDY
                     TGMITNTGEILAGDFNFLPGITFDVYDVTTEYYAAYDASVATKSVSQAVNDAVATVKG
                     TAGVAPSGKVASATQTTGPDGSTTFSLNAKSSGRNAVYLFVEQASEGVTTVADNLVVS
                     LPIYKQGTNDTVLTSIHLYPKNITKDTPFDKDITSQKNSAKQTDFSIGQTIDYKLKTT
                     IPADIAATKLVDGVAKKLYNVFQFVDSFETDQLVFINEPATYSVKVADGPVLAATEDY
                     TVTVAEQGSKTTVTTKLTEAGIEKLASHANKEIAFSYQMKIHSLQYIDTGIVNTAKAI
                     FGNDGTTGINKWDKETPEDFETVKTGGYKFKKVDVNNEAKTLEGAEFVVRKNTTDSAE
                     YFKASAEGGQWVTSYEEATKYTTDSTGIVDVKGLEYGIYQLQETKAPEGYALPTGMAA
                     YTQFEVTANSYTTTAGAPHKLVNTPKGFLPSTGGTGIVLFVALGGVMIALAGTYFVSR
                     RKAA"
     gene            10798..11625
                     /locus_tag="AC1PJC_001599"
     CDS             10798..11625
                     /locus_tag="AC1PJC_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005471981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class C sortase"
                     /protein_id="HIP6620582.1"
                     /translation="MGVVLACGIGILSYPFIRNSLNDLMNQQIIQHYQQQANQKSTEE
                     YQQKLAEMEAKNKQFAYQNISPGFDPFSEEARKVEDLKTVYEDHVLGVISIPKIQIRL
                     PIFDQTREDFLARGATYLEGTSFPIGGESTHSVISGHRGLTEAKLFTDLPNLVEGDRF
                     YIELKESEIHAYQVDKIQVVDPSDVSSLQIVEGQDYVTLVTCTPYMVNSHRILVRGHR
                     IPYKAEIMEAEVKQVAVLPANYIPLFIGIPVSFIFLAILLKKCYGKMKPLRKNHKRN"
     gene            complement(11885..12688)
                     /locus_tag="AC1PJC_001600"
     CDS             complement(11885..12688)
                     /locus_tag="AC1PJC_001600"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HIP6620583.1"
                     /translation="MKKILVLALASSILLTACTNNSTANSSSSTASSSSPSSTTTADT
                     TASSQYAKDLAYAINNPKATFPQLSNEIGENEAAVKIKTTEGDITIKLFPEQAPLTVE
                     NFLTHAKEGYYNGTIFHRVIKDFMIQGGDPLGNGTGGESIWAGKDTTIDAGNGFKDEI
                     SAFLYNIRGSLSMANAGAGTNGSQFFINQNTTDMSSQLSSSSYPGKIIDAYKNGGNPN
                     LDGKHTVFGQVIEGMDIVDKIASVETDNSDKPKTDVKIESIEILKDYTF"
BASE COUNT         3995 a         2305 c         2789 g         3689 t
ORIGIN      
        1 ttacgaaaat tccctataat actgctattt tccaaaaaca tcaaaatttg ctataatagg
       61 agtatatcat tgaaaagaga gaaaactatg agcaataact atgcaattat cctagcggcg
      121 ggtaagggaa ctcgcatgaa gtctgacttg ccaaaggtct tacacaaagt ggcaggaatt
      181 accatgttgg agcatgtcaa acgggctgta gatgctatgg aacctgctaa aacagtaacg
      241 attgtcggtc acaaggcaga attggtccaa gcagttcttg aaggtcagtc agagtttgcc
      301 cttcaatctg aacaactggg gactggccac gccgttatga tggctgagcc agctcttgca
      361 ggtttggaag gtcagaccct tgttatcgca ggagatacac cgctgattac aggagaaagc
      421 ttgaagaacc tcattaactt ccatgtcagc cacaagaatg ttgcgactat cttgacagct
      481 caggctgata acccattcgg atatggtcgg attattcgca atgctgatgg tgaagtgcaa
      541 aaaattgttg agcaaaaaga tgccaacgat tttgaaaaac aagtgaaaga aatcaataca
      601 ggaacctact tgtttgataa taaacgtctt tttgaagcgc ttaaagatat taatacggac
      661 aatgcccaag gtgagtacta tctgacagat gttatttcga ttttccgtca ggcaggcgag
      721 aaggttggtg cctatgtatt gcgtgatttt gatgaaagtt tgggtgtcaa tgatcgcgtc
      781 gctcttgcga ctgcagaagc tgttatgcgc aaacgaatca atgaaaaaca catggtcaat
      841 ggtgtgacat ttatcaaccc agatgctacc tatattgata ttgatgttga gattggggca
      901 gaagctgtta tcgaagctaa tgttgtcttg aaagggcaaa cggtgattgg tgaacgtact
      961 gttttaacca atggtactcg tgtacgtgat gcgaaaattg cagcagatgc agtcatcagc
     1021 aactcagaca ttgaagaatc tgtcattgaa gaaggtgtga cggtaggacc atacgcccat
     1081 attcgtccag gcagtctctt gaaaaaagat gttcacgttg gaaactttgt ggaaatcaag
     1141 gcctctacac ttggtcaagg aacgaagtct ggtcatttga cctatctagg aaatgcaacg
     1201 attggcaata atgttaatgt tggtgctggt accatcactg tcaactacga tggtaaaaat
     1261 aaatttaaaa caaccgttgg agataatgcc tttgttggct ctaactcaac cattatcgca
     1321 ccagtaacta ttggggacaa tgccttgttg gctgcaggtt ctgtcattac aaaagacatt
     1381 ccagaggatg ccatcggtat tggtcgtggt cgtcaagaaa acaaagaagg ttatgcgact
     1441 cgttttccgt tccatccaag tcaaaaatag gtaatcatat gaattttgaa gaaaaaacca
     1501 ttgagcggac agaaattttt aaagggcaca tttttgatgt agtagtagat gatgttgcct
     1561 tgccaaatgg tggaactggt aagcgcgaac tcattttcca caagggagca gtttgcgttt
     1621 tagccgttac cccagaaggt aaaatgattt tggtcaaaca ataccgcaag gccattgaac
     1681 gtactattta tgaaattccg gcggggaaat tggagctggg cgaagaagat acgcttgaag
     1741 atgcagcttt gcgtgaatta gaagaagaaa caggctatac tagtgacaaa ctgatcttgt
     1801 tggcagattt ctattcagcc atcggtttct gtaatgaacg aattcgcctt tatttagcag
     1861 ataaccttat caaggttgaa aatcctcgtc caatggatga agatgaggtt atcgaattac
     1921 atgaggtaac cttggaagag gctttgaact tggtggctac tggcgatatt tgtgatgcaa
     1981 agaccatcat ggctatccaa tatttacaac tcatgagaaa gtaggaaact agcaatgggc
     2041 aagcccttgt tgacggatga aattttagag aaagtgaaaa agaaacagta ttctgaccaa
     2101 tctagccagt ttggacacta tcgtccaaac caggatatat caatggatga tgctctattc
     2161 gatccatatc tagaagaaga ttatcaggga tatgaagagg gacaaacgat ccgaatcccg
     2221 gtcaaaccta ctgtagtaaa aagtcgccgt atcgaaacca tcaagcgaga agctttccgc
     2281 agtaaggtaa acaaaatcct tttttgggtc atcatcttac tgataatgtt tatcattgca
     2341 gtattattta tttaggagaa gagatgaaat ttggaattat cgcagccatg cctcaggaat
     2401 taaagatttt ggtcgagcat ctacaagatg caactgaaac tgatgtcttg ggtcgaactt
     2461 actatcaggg acgaatcggt caacatgaag tcgttcttgt tcagtcaggt atcggtaagg
     2521 ttatgtcagc tatgtccgtg gctgttttgg cagatcgttt ttcggttgat gtcattgtca
     2581 atacaggttc ggcaggagct gttgccgaag gtattgccat cggtgatgtg gttgtagcga
     2641 atcaattggc ttaccacgat gtggatgtga cggctttcgg ctatgcttac gggcaaatgg
     2701 cagggcagga attgtattat ccagccgacc aagtcttgtt agaacagcta agaaccgttt
     2761 tagcagagca ggaaatgatt agtcatgtgg gtctgattgt gacaggtgac agttttatcg
     2821 caggtcagga gagaatcgct acaatcaaaa ctcattttcc agaagtcctt gccgtagaga
     2881 tggaaggagc agctatcgct caagcagctg tcaatacagg taagccattc ttggttatcc
     2941 gtgccatgag tgacacagct cagggagatg ccaatatcac ctttgatgaa tttatcattc
     3001 aagcaggaga acgttctgcc cagaccctga ttgcctttct ggagaaaaat taagcagatt
     3061 ttgacaacaa tatattgaaa taggatgaca gtagcaaaaa attgttactg tttttcttat
     3121 gcagtaattt gagcccgata ttataaggtt tcagccatct gtccccatac aatttctgat
     3181 aagagttatt gaaaagctcg tgaaaatact ttacaatttt gtttaagaaa aataatttag
     3241 gaggttgtta tggttcagcg attattgctt gcaaatgatt tacctggtgt gggtaaggtt
     3301 gccctagcca ctagcatccc aattgcagca gcctgtcagg tagaaacgat tcttttacca
     3361 acggtactac tttcttctca tacgggtggt tttccagatg ttgtcgttga agatatgact
     3421 gacttgaatc aagcctattt tgaacagtgg aagaacttga atttggagtt ggcaggcatc
     3481 ttgtctggct actgtagaaa tcctcagcaa ctaagtcaat tggctatgta tgcgaaacaa
     3541 acagagacac cattgattgt tgatccggtc atgggggatg gagggaagtt gtatacaggt
     3601 ttcacatcta cctatgtaga tgccatgaaa gagttgatcc agtcggccaa gctcattctt
     3661 ccgaatataa cagaagcttc tcttttaact gggagaaact atttgggaga ttcctacgat
     3721 attcatgata ttgaggattt agtaaaatct ttggcagagc aggtatccgc agatattgta
     3781 ctgacaggga tttcctttga tgatagccaa ataggtgtag cctattttca gcaggaaaca
     3841 ggggaaataa ctacctatat gtctaaaaaa tatccagcaa atttctttgg aacaggtgac
     3901 attctatcta ccttattggc agtagcaacc atccaacaaa tcaatctcca tcaagctatc
     3961 cctctagctt tagattttat cgacaagagt ttagagtgta ctcttgcttt ggatagagac
     4021 ttgaaatttg ggatttcctt tgaacctttt ctagcagcat tacagcaggc atttcaaaca
     4081 ttaaaggaga atttatgaaa cagaatcaat tgcgtcaatt aacagaaatt agcctatttg
     4141 cagctcttat ttgtgtggtt gtcttcttta ttcgtattcc ttttgggagt caatttgtcc
     4201 atctaggcaa tgctctggtg gtagtaggag tactaatctt tggtgccaaa aaaggagcgc
     4261 tggcagcctc actcggtcta ggcatcttcg atttactgtc gggatatgct tccgttgctt
     4321 ggattaccat tctagaatca ctcattgtct gttttgtcct ccacttattt tatgagaaat
     4381 tcctgcaggc aaacgatagt ctatcaaata ttatgtttgt tgggatagtt gcagccctca
     4441 caaaaattat cttgaacctg ttgaaataca cattgacggg gagtttagtc ggtggactaa
     4501 cgccatcagc atcattttta gctgctttgg gtaggatttt aggaacctat ggcactgcaa
     4561 ttacgaccat cattgctgta cctattcttt atcaggtatg taaaaagtta tataagagaa
     4621 aataatttat ataaagtgta aaagtacgct cattgaatac aaggtatttc aatggggggt
     4681 acttttattg ttgtattgta tatttgggct caatttgaat agatttttaa aattgttatc
     4741 ggtatcaatt ttatttaatt tttttatgaa aatgtataaa aatgcattga aaacatggac
     4801 aaataaaggt ttttccgcga ttagatagct ttttcaggaa gcttgccagc taatcttaaa
     4861 tgtgttatta tgctttacga aaacgtttgc gtaaagacaa agtggagatt gtcgaaagaa
     4921 aacagtatag tggtgttctt gatttttaaa taaatgaaag agagatgcct atgaagtttt
     4981 taaggaaatt attggcaggg cttttggttg tttttgtaac cttagctagt ggctcgctgg
     5041 aaacagtggc atggagtcct tatacggact ttcctgacca aagtttgcgt gagtgggcta
     5101 ccaaagacag caactatgtt gctagcgacc tacctgcccc tcctgctata gctaacactg
     5161 tagatatggc ggatatgttt cattatccac agctgatata tacaggttca atatccgacg
     5221 atgctgttca gacaggtaag ttggctaaaa atcgttccta tgtcacggat attgatacat
     5281 ccgtagccgt catcacacgt gatgccagat ggcaatcagg ggttatgtgg agtttggaag
     5341 agaataaaat taagctcaac gaaccctttc agatggttag ttatgtttat ctagggaaca
     5401 gaacccaata tgataagaat tttaatggtc tcggtggtgc ggatggtatt accttcacga
     5461 tgcacaatga caagaaatcc gttgcagata tgcaagcggg gaataagatt ggttcgggag
     5521 acctgagcaa tacaggaata aatgcctacg gtgctctggg gaacggcttg ggagtatatg
     5581 gttcaaactt tagcgcaaac gtcagcagtg aaaaaaataa tatggttgat ttttggcgtg
     5641 gtgttgaaaa tgggattaca ttggagtttg ataccttttt caacgataat gatactaccc
     5701 aacattcaga taatgaccta acttcgatta tctacaatga gaaccacagc aatacgcagt
     5761 acggtcacat tgctataaat ttattaaatg attttaaaaa taatcgagca aattacaata
     5821 aagagccaga taaaacagct aacaagcata aaataaagct tagtttggga tgggatggcg
     5881 aggtagcaga taaggctaat ccttacagtt ggaatctttc taactggcca accagtagtt
     5941 tagcagatgg tagatggcat cgcctcgagg tgacttggac accagatact actagtaata
     6001 caggaaattt gaattatacg atatacaagc aaggtcatga ggggtcccgt aatatcgaat
     6061 atagcgacga tcgctccaaa gatggtacgg atgttctctc ttatgatgtc tcaatcggaa
     6121 caggtgacta ttcccttgaa aaggtatttg gtatctcaga tctaaatcat acggtttact
     6181 ggggcttctc agggtcgaca ggaggtttcc tgaataatca ggctgttcaa atggtgcaat
     6241 taccaatctc gtattacaat gttgaattga ggaaagaaga ccaggatggc aatttagttt
     6301 ctgatgctat ctttgaaatt gaaaagaaaa atcctgatac aggtgagtgg attcctctgg
     6361 aattttacaa cccaaggact ggaagaacag tttctcagat ttctacaggc tcacaccgat
     6421 tctatcaagg tgtagttgga gaagagggga ttttgaaact ctcgcaatta acagaaggga
     6481 cctaccgttg gaaagaaata gcagctcctg agggctacca gcttgatcag gtatattatc
     6541 caaatgagga tggttttgtt gttaattatt cggaatctct caaggaaaat gcctttgttt
     6601 atacggctac aaataaaaaa ttatatcaac ttgaattaat aaaaacggat gcagatacgg
     6661 gtcaggcgat aaatgatgtg ccctttgtta tttcaaagat tgaaaatgac atctcacatt
     6721 atctgaaaat caaggcagat aacactggct ttgattggac aagaatagag ggcgaggcca
     6781 aacaatttct atctggcaaa tcctattcta taggggcaga tggccaggtc tctgagcaaa
     6841 ttggagaaga tggaaaaatc agcatccagt attttccaga tgcatcaaat ctcttttgga
     6901 aagaagtgtc cgtgccgatt ggatacaatt ctaaaacgat tctgagtgga gcgtttacta
     6961 ctgtagccga caataaatac agctatacgg ctagtcaaag aaatgaacga ttgttccaaa
     7021 tcaacttaga gaaaaaaggt agtgacacta atgctgccct gcaaggagct gtctttgctt
     7081 tacaggaaaa agttggttcc gaatggattc ctgtcagcta tagtgggaaa acagaattca
     7141 ctacgaatct agaaggaaaa ataagcattc caaatctcgc tgctgggcag tatcgatggg
     7201 aggaaaaaca agctccggta ggttaccaac ttagtcagca atattatcca aatgaaaatg
     7261 gttttgtagt agcatatcgt gagggtctgg aagttgacca agtgtatcat aattatatct
     7321 ttgatacaac aaccgttacg aatcaaccta aggattttga gttattcttg gagaaaaaat
     7381 cctctacatt ccaaagaccg cttgagaatg ttgaattcaa actttattca acacgtaatg
     7441 gagatacttt ttctggagag ttggctagag tcagaacaaa ttcagaagga aaaattgttt
     7501 ttggaaagga tattctaaaa gctgataaaa cctattattt agttgaaagt cagacgattg
     7561 atggttttat acgtttagaa ggttacttta cgataaccac atccaaaaca gatggtatca
     7621 atattactta tacgaaagca gatggtgaag aagattcgag gccgtttgaa tttaccaggg
     7681 cagacgacac tatctacaaa ggtactttag cagtctataa taagcggaag tcaattttac
     7741 ccattacagg tgggaatggg attgtaccct atattgtcat tggtggcagt ctgacgattc
     7801 ttgctttact ctttttcaca cgaaagcgat ttgtcaaatg gctttttgtg atcatcattg
     7861 caacaacagg gcttattggg cagaatacta ggatttttgc acaagagcaa gggcaggtca
     7921 ccattgaggt caatcgtctg atttatccag taacagatac tcactacaaa tcaggaagtc
     7981 cagtagcagg ggcatatttg gaaattgttg atgttacgaa tgaattttac gacctagtcc
     8041 acttgaaatc cttatcgaga ctaggggcgc aggaaacatt gagtaaggcg caaaacgccc
     8101 aaggtgagaa agtaggtcag gctgtaacgg acgataaagg aaaggcttat tttactgtag
     8161 aaaaaataag tagagaccac ccggcggtct acctcatcag ggaaacggta acacctgttg
     8221 cagtcacacc tatggaaccg cttgtggtag tattacccct gttagatgat caagggaaag
     8281 agcggtctca aatatcggtt tatcccaaag cacagggaac ctttactttt gataaaacaa
     8341 tagatggaaa gagggccagt tacagtttgg gagaacccat tcattaccgt ctgtctacta
     8401 ttcttccaca agatattgta aacttagcaa gttatgaatt agaagatgtt tatgatgtag
     8461 gtttggaatt tatcagtgaa agtctgagag tctcgattga tggacaggaa caagcgggtc
     8521 tcatagagtc aatcagccag tcagaaaatc gttttaaact atcgtttgat attgcaaaac
     8581 tcgctcagtt tggcggaaaa acactagacc ttacctacaa tatggttatt accgatgaag
     8641 ctgcaattga tcaaccattg ataaatacag caactctcta tcctggagat ctaactccat
     8701 tagttgatag ggagcaggtg ataacaggcg gttttcgatt tatcaagcaa aaggcaggcg
     8761 gaaacaagga tcccttagcc aatgcaaaat ttattatcaa gcatcccgct aatcaaacaa
     8821 tccttaccta taaggaagga aggtatcaat ttgaaaaggt agcccctgag gaaaaggatg
     8881 ttgttcaact gacttccgat gcccaaggtc attttgagat aaagggattg agttatggca
     8941 cctatcttct aagtgagata caagcgccat caggctacat cttaaatgaa aatccgacta
     9001 catttactat ctctacctct acttttacga aagggccgat tttatcgata tataatgttg
     9061 aaaaacctcg gattcagctt cctaaaacag ggacagcagc aacatcgtta gcagctatcg
     9121 gattattatg tttagtatca tccattatga tgaataggag cagatgctcg tctaaaaagg
     9181 agaaatataa tgaaaaagtt taagtttttt gcattactag cgactctttt agtgagtacg
     9241 tttagcagtt tactgacacc gtttgtgtcg gctgacgaaa cagaaaaagt atcaattaca
     9301 ctacataagg taaaggacta tacaggtatg attaccaata caggtgaaat cctagcagga
     9361 gattttaact ttcttcctgg aattaccttt gatgtttatg atgtaacgac agaatattat
     9421 gcagcctatg atgcctctgt tgcgacaaag tcagtatcac aggcggtaaa tgatgcggtt
     9481 gccactgtca aaggaacagc tggagtggct ccatcaggta aagttgcatc tgcaactcaa
     9541 acaacaggtc cagatggcag taccacattc agccttaatg ccaaatcttc tggccgtaat
     9601 gcagtatatc tttttgtaga gcaagcgagc gaaggtgtaa caactgttgc tgataatctg
     9661 gtggtaagtc ttccaatcta taaacaggga acaaatgata cggtattgac atccattcac
     9721 ctctatccaa agaatatcac aaaagataca ccttttgaca aagatattac cagtcaaaaa
     9781 aatagtgcaa aacaaacgga tttctctatt ggacaaacca ttgattataa attaaaaacc
     9841 accatcccag cagacatcgc tgcaaccaaa ttagtcgatg gtgtagctaa aaagttgtac
     9901 aatgttttcc aatttgtaga tagttttgaa acagaccaac ttgtctttat caatgaacca
     9961 gctacttact cagtaaaagt ggcagacggt cctgtattgg cagcaactga ggactatact
    10021 gtaacagtag cggaacaagg tagtaaaacc actgtcacaa cgaaattaac agaagcaggt
    10081 attgaaaaat tagcaagtca tgccaataaa gaaattgctt ttagctatca aatgaagatt
    10141 cattccctcc aatatattga tacgggcatc gtcaatactg caaaagcaat ttttggtaac
    10201 gatggtacca caggtattaa taaatgggac aaagaaacac cagaagattt tgaaacagta
    10261 aaaacaggcg gttataagtt taaaaaagtt gatgtgaaca atgaggctaa aactcttgag
    10321 ggagcagaat tcgtcgttcg caaaaatact actgattctg cagaatactt caaagcaagt
    10381 gccgaaggtg gtcaatgggt tacttcttat gaagaagcaa caaaatatac aactgattca
    10441 acaggaattg tggatgtaaa aggtctcgaa tatggcatat accaacttca agaaacaaaa
    10501 gctccagagg gctacgcttt accgactggt atggcagcct acactcaatt tgaagtaaca
    10561 gctaattctt atacgactac tgcaggagct ccgcataaac tcgtcaatac accgaaaggt
    10621 ttccttcctt ctacaggtgg tacaggaatt gttcttttcg ttgcacttgg aggtgtaatg
    10681 attgctcttg caggtaccta ttttgtgtct cgtcgtaaag cagcataatg ataatggaca
    10741 ggggagaata tggagcgaac aaagaaaaat acaaaaagaa aaatagtgga tactgtcatg
    10801 ggggtcgttc tggcctgtgg tattggcatt ctctcctatc cattcattag aaatagtttg
    10861 aatgacttga tgaaccaaca aatcattcaa cattaccagc agcaagcaaa tcaaaaaagt
    10921 accgaggaat atcaacaaaa attagccgaa atggaggcaa aaaataagca atttgcttat
    10981 caaaatatct ctcccggatt tgatcctttc tccgaagagg ccagaaaagt cgaagatcta
    11041 aaaacggtct atgaagacca tgttttgggc gttatttcta tccctaaaat ccaaatcaga
    11101 ttgcctattt ttgaccaaac cagggaggac tttctcgcgc gtggcgcaac ctatttagaa
    11161 gggacttcct tcccaatcgg tggagaatcg acgcattcgg ttatttctgg acatcgtggc
    11221 ttgaccgaag ctaaattgtt tacagactta ccaaacctag ttgaagggga tagattttat
    11281 attgagctca aagagtctga aattcatgcc taccaagtag ataagattca agttgttgat
    11341 cctagtgatg ttagtagcct acagattgtt gaaggacagg attatgtcac gttggtgact
    11401 tgcacacctt atatggtaaa tagccacagg attttggtta ggggacatcg tatcccatac
    11461 aaagcggaga taatggaagc ggaagtgaag caagtcgcgg tccttccagc caattacatc
    11521 cctctattta ttggaatacc tgtttcattt atctttttgg ctatattgct aaagaaatgc
    11581 tacggaaaaa tgaagccgtt gcgtaaaaat cataagagaa attaacctag cttggcttct
    11641 ttaaataatg tctttaaact cgtgaaaaac agttgacacc cctgttttca taacataatc
    11701 tccaatttat gtctttcagt cttccttttg ttacttaggg atgatcgttt tcttctttcc
    11761 gaataccgat aatttttctt tatagagtaa gctgaaagac cctagcaaac agtaactggt
    11821 tttcacgtga taaaagaaac agagtgccta ctctccgaca ggaggtgggc actctgtttc
    11881 ttttttaaaa ggtgtaatct ttcagaatct caatagactc aatttttaca tctgttttag
    11941 gtttatcgct attgtctgtt tcgacggaag cgattttatc cacgatgtcc atcccttcaa
    12001 tgacttgacc aaatacggta tgcttgccat ctaagtttgg attgcctccg tttttataag
    12061 cgtcaatgat tttaccggga tagctagaac tagagagttg gctagacatg tctgttgtat
    12121 tttgattgat gaaaaactga cttccatttg ttcccgcgcc agcatttgcc atagaaagtg
    12181 agccacgaat gttataaagg aaagctgaaa tctcgtcttt aaaaccattc ccagcatcga
    12241 tagtagtatc ttttccggcc cagatagact ctccaccagt accatttcca agaggatcgc
    12301 caccttgaat catgaaatcc ttaatgacac gatggaagat cgttccatta tagtatcctt
    12361 ccttcgcatg agtcagaaag ttttctacag ttagtggggc ttgctcgggg aagagtttta
    12421 tagtgatgtc gccttcggtt gtctttattt taacagcagc ctcattttca ccaatttcat
    12481 tggaaagttg ggggaatgta gctttgggat tgttaatggc gtatgccaaa tctttggcat
    12541 attggctaga agcagttgta tcagctgtcg tagtcgagct tggactagaa ctagatgctg
    12601 tagaagatga gctattagct gtcgagttgt ttgtgcaggc agttagcaag atgctcgaag
    12661 ctagagcaag aactagtatt tttttcattg aaaatccttt cttgtcttgt tcaaaattat
    12721 gctcattcta ccatgaaata tggatttttt caatttttat ctagtataaa aagtgtat
//
LOCUS       DBNFCX010000066        12307 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.066, whole genome shotgun sequence.
ACCESSION   DBNFCX010000066 DBNFCX010000000
VERSION     DBNFCX010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 12307)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12307)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12307
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.066"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            89..790
                     /locus_tag="AC1PJC_001601"
     CDS             89..790
                     /locus_tag="AC1PJC_001601"
                     /EC_number="5.1.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047465 - N-acylglucosamine-6-phosphate
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006051 - N-acetylmannosamine metabolic
                     process [Evidence IEA];
                     GO_process: GO:0019262 - N-acetylneuraminate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
                     /protein_id="HIP6620584.1"
                     /translation="MGKISKEALKEQIKDGIIISCQALPGEPLYREEGGIMPLLVKAA
                     QEAGAVGIRANSVRDIKEIKEVTTLPIIGIIKRDYPPQEPFITATMREVDELAALDIE
                     VIALDCTKRERYDGLDIVDFIKQIKEKYPEQLFMADISTFEEGLTAYEAGIDFIGTTL
                     SGYTSYSRQEEGPDIELVDRLCRAGIDVIAEGKIHYPDQVKIIHDLGVAGIVVGGAIT
                     RPKEIAERFISALHK"
     gene            818..2326
                     /locus_tag="AC1PJC_001602"
     CDS             818..2326
                     /locus_tag="AC1PJC_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HIP6620585.1"
                     /translation="MNFKKFSQLGQAFMLPISILPVAGLLLGIGGALSNSNAVAQFPV
                     LDQAWLQAVFTIMSTAGSAVFANLALIFAIGVAVGLADADKGTAGLSAGVAYLVYTAT
                     ISGFLTLFADKGASIDTGVLGALAIGITVATLHNKYRKIELPAFLGFFGGSRFIPIIS
                     SFAAIAIGSIFYIIWPPIQNLLVDFGKAIAAMGSFGTFLYGFGLRLTGAFGLHHTIYP
                     MFWYTSLGGSEVVAGETIQGAQNIFFAQLADANHTGLFTYGTRFFAGRFATMIFGLPA
                     SCLAMYHAIPKENRKKVGSFYSSSALTSLLTGITEPIEFSFLFVAPWLYVVHAFLDGL
                     SFLVADLLQIRIGNSFSGGLIDYLIFGVFQGNDKTNWIYVIPVGLLWAAVYYLVFKFL
                     VTKFHVLVPGMESSDQASHSEKVLSNGSSLRDNAIAIIDALGGADNIENVTACATRLR
                     VSLRNSGLVDKGVIQSIGATAVLDVKGGIQAIFGGKAILYSQEINQILGLEE"
     gene            complement(2448..3260)
                     /locus_tag="AC1PJC_001603"
     CDS             complement(2448..3260)
                     /locus_tag="AC1PJC_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HIP6620586.1"
                     /translation="MLQTPKHITAIIESHLDQMTRLEKQIASYFTQLDPSSTDLSQEN
                     TIQQLHISPSALTRFAKKCGFSGYREFVFAFQNNQEYLDKHFEKLQRSLTKKVLVDYE
                     EILTATNKLVDEEKLEEIAKLIDSSKRVYFYGIGSSGLVAMEIKSRFMRLGVVCDAIT
                     DKNNLIWTTTILDPSCLVIGLSLSGQTEEVMEHLQLAAQKGIPTALLTTKSFPHPTFD
                     QIIPVASVRHLNYGNRISPQIPLLIMLDIIYAYFLAIDKEKKENIFKQTIRE"
     gene            3360..3857
                     /gene="ybeY"
                     /locus_tag="AC1PJC_001604"
     CDS             3360..3857
                     /gene="ybeY"
                     /locus_tag="AC1PJC_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018380869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HIP6620587.1"
                     /translation="MYIEMIDETGQVSAQMQEQITELLQFAAEKIGKQNKEMAVTFVD
                     NKRVHEVNLEYRGIDRPTDVVSLEYKPESEIVFDEEDLLDNPELAEMMEDFDAYIGEL
                     YISIDKAREQAEDYGHSYEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEILTAY
                     GLTRE"
     gene            3838..4239
                     /locus_tag="AC1PJC_001605"
     CDS             3838..4239
                     /locus_tag="AC1PJC_001605"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HIP6620588.1"
                     /translation="MDLQENNSKNRWKNRELIASLEFAVTGLLTAFKEERNMKKHLAS
                     AILVVLAGLIFQVSVTEWLFLLLSISLVIAFEIVNSAIENVVDLASDYHFSMLAKNAK
                     DMAAGAVLFVSGFALLTGLIIFVPKIWDFIF"
     gene            4256..5155
                     /gene="era"
                     /locus_tag="AC1PJC_001606"
     CDS             4256..5155
                     /gene="era"
                     /locus_tag="AC1PJC_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HIP6620589.1"
                     /translation="MTFKSGFVAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKI
                     MGIYTTEEEQIVFIDTPGIHKPKTALGDFMVESAYSTLREVDTVLFMVPADEKRGKGD
                     DMIMERLKQAKVPVILVVNKIDKVHPDQLLEQIDDFRQQMDFKEIVPISATQGNNVNR
                     LMEILKENLDEGFQYFPADQITDHPERFLVSEMIREKVLHLTREEIPHSVAVVIESMK
                     RDEFTDKVHIRATIMVERDSQKGIIIGKQGAMLKKIGSMARRDIELMLGDKVFLETWV
                     KVKKNWRDKKLDLADFGYNEKEY"
     gene            5847..6674
                     /gene="mutM"
                     /locus_tag="AC1PJC_001607"
     CDS             5847..6674
                     /gene="mutM"
                     /locus_tag="AC1PJC_001607"
                     /EC_number="3.2.2.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase"
                     /protein_id="HIP6620590.1"
                     /translation="MPELPEVETVRRGLNRLVKGKVIEKVKVTYAPMIKTGVDAFCQD
                     LLGQEILDVDRRGKYLLVYLTDHVLISHLRMEGKYNFFPDQVPANKHFHAFFTFTDGS
                     SLVYQDVRKFGTMELLGKADVEAYFISRKIGPEPTEEDFDLEAFAAKLAKSKKPIKSH
                     LLDQSLVAGLGNIYVDEVLFRAQVHPAQASNQLSAEQVTSLRQATIEVLQLGIEKGGS
                     TIRTYKNALGMDGTMQDYLQVYGKTGQACPRCQTEIVKIQLGGRGTHFCPKCQVKNG"
     gene            6667..7269
                     /gene="coaE"
                     /locus_tag="AC1PJC_001608"
     CDS             6667..7269
                     /gene="coaE"
                     /locus_tag="AC1PJC_001608"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637643.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HIP6620591.1"
                     /translation="MAKVIGITGGIASGKSTVTAFLRQQGYPVIDADAVVHELQAKGG
                     KLYQVLLAEFGEAILSADGSLDRAKLGQAVFADSKLRARLSVLQDQIIRQELLTRRDV
                     LKQTEDVIFMDIPLLYEADYSGEVNEVWLVYVDRAQQLERLMKRNGLAVQDAENRLAA
                     QLSLEEKRSQAQVVIDNSGAVEATLAQVTQLLEELKDGRR"
     gene            7256..8461
                     /locus_tag="AC1PJC_001609"
     CDS             7256..8461
                     /locus_tag="AC1PJC_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter"
                     /protein_id="HIP6620592.1"
                     /translation="MDDGSSYWKQNLKVAWLGNFLTGTSFTLVMPFISVFVEELGVGP
                     GQVEYYAGLAVSVNALAAALMAPIWGSLADRYGRKPMMVRAAFAMIFTMGGMAFVPNV
                     FWLLALRVLNGVFTGYIPNATALIASQVPKDKTGYALGTLSTGAVAGNLIGPTLGGIL
                     AEMFGVHMVFLLVGLLYAIVVLLTVFYIREDFVPIKKGEEMSVKEVFEQVKDRQMLVG
                     LFVTSMIIIAAAQAVVPILTLYVRHLGQTDNLLFVAGFIISLPGMASLVTSGYLGKIG
                     DRIGNHRLLLIALTYSLLINVFCVFAENPFQLGLLRFMYGFGTGALLPSVNSLLTKLT
                     PKEGISRIFSYNQLFNNLGSVVGPMMGSAVAAHMGYDWVFYLSSGLVLFNLIWSLTNF
                     RNYLKVRDV"
     gene            8461..8610
                     /gene="rpmG"
                     /locus_tag="AC1PJC_001610"
     CDS             8461..8610
                     /gene="rpmG"
                     /locus_tag="AC1PJC_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008809064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HIP6620593.1"
                     /translation="MRVKINLQCSECGSKNYLTSKNAKTHPDKIEVLKYCPKERKVTL
                     HLETK"
     gene            8657..8890
                     /gene="secG"
                     /locus_tag="AC1PJC_001611"
     CDS             8657..8890
                     /gene="secG"
                     /locus_tag="AC1PJC_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015136 - sialic acid transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015739 - sialic acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HIP6620594.1"
                     /translation="MYQALLAILLILSVILIVVIFIQPAKNQSSNVFDSSSGALFERT
                     KARGFEAVMQRITAILVFLWMLDALALVIISSK"
     gene            9323..11692
                     /gene="rnr"
                     /locus_tag="AC1PJC_001612"
     CDS             9323..11692
                     /gene="rnr"
                     /locus_tag="AC1PJC_001612"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HIP6620595.1"
                     /translation="MKNEIINYIKEVGPVTMDQLADQLGASSAKSFTDLVKLVSSMEG
                     SRQLVFDNAGRITLPAPKISKNKVTLQGIFRAHKSGFGFVTIDEEEDDLFVSRDDVNF
                     AIEGDRVEIAIKKVADRLKGTAAEAEVIDILEHSLKTAVGLIVFDEDKPEYAGYIKSK
                     NQKIAQKIYIKKSPLVLTGTEILKVDIEAYPSKKRDHFVATIRDVVGHKDDVGIDVLE
                     VLESMDIVSEFPDEVLAEANRVPESPSEKDFEGRLDLRDEIIFTIDGADAKDLDDAVH
                     IKQLKNGNLELGVHIADVSYYVTEGSALDQEAVKRGTSVYVTDRVVPMLPERLSNGIC
                     SLNPNVDRLTQSAIMEIDRKGKVVKHWIGQTVIKTTFRMTYSDVNDMIAGNKEKLDKY
                     KAIVPSVELMVKLHETLETMRYKRGALNFDTAEAKIIVNKDGLPVDIQLRQRGIAERI
                     IESFMLAANECVAEHFAKLDLPFIYRIHEEPKSDKLQKFIDYATSFGLTVYGTASSIS
                     QDALQDLMERVKDEPYADVLNMMLLRSMQQARYSEHNHGHYGLGAEFYTHFTSPIRRY
                     PDLLVHRMVREYGHNSVEKAEHFEQVIPELAKSSSSLERRAIEAEREVEAMKKAEFMQ
                     EFVGQEFDGVVSSVVKFGLFVELPNTVEGLIHITNLNEYYQFHERTLTLQGEKSGRVF
                     RVGQPIRIKLTRADKMTGEIDFAHVPSELDIVEKALKAKRRTASHSNRDRDDRSGRGR
                     GKHHKQEAAGRDSGRHKSGKDHKSKSGKKDKKKKPFYKEMAKKNKKKRR"
     gene            11695..12162
                     /gene="smpB"
                     /locus_tag="AC1PJC_001613"
     CDS             11695..12162
                     /gene="smpB"
                     /locus_tag="AC1PJC_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HIP6620596.1"
                     /translation="MAKGEGNVIAQNKKARHDYTIVDTVEAGMVLTGTEIKSIRAGRI
                     NLKDGFAQIKQGEAWLVNVHIAPYDEGNIWNQEPTRTRKLLLRKKQIESLGNEVKGTG
                     MTLVPLKVYIKDGFAKVLIGLAKGKHDYDKRESIKRREQDRDIKRTMKAINAR"
BASE COUNT         3408 a         2307 c         3088 g         3504 t
ORIGIN      
        1 tgaggaactg ggattgaaaa aaagttaatg tgctatataa taatattgta agcgctatcc
       61 ataatccagg aatagaaagg agaaattaat gggcaagatc agtaaggaag ctctaaaaga
      121 acagataaaa gatggaatta tcatttcctg tcaggctttg ccaggcgaac ctctgtatcg
      181 ggaagaaggc ggtattatgc ctttactagt caaggctgcc caagaagcag gggctgtcgg
      241 tattcgggcc aatagtgtac gagatattaa ggagataaaa gaagtaacga ctttaccaat
      301 tatcggaatt atcaagcgag actatcctcc acaagaaccc tttattacgg ctacgatgcg
      361 agaagtagac gagctagcag ctctagatat tgaagtcatt gctcttgatt gtaccaagcg
      421 tgagcgttat gacggactcg atattgttga tttcattaag caaatcaagg aaaaatatcc
      481 cgaacaactt tttatggcag atatttcaac ctttgaggaa ggattaactg cttatgaagc
      541 aggcatcgat ttcattggga caacactttc ggggtatacc tcctatagta ggcaggagga
      601 gggtccagat attgaattgg ttgaccgctt gtgccgagca ggtatcgatg tgatagcgga
      661 aggaaaaata cactatcctg accaagtaaa aattattcat gatttaggtg tggcaggaat
      721 tgttgtaggc ggtgcgatca cacgtccaaa ggaaatcgca gagcggttta ttagtgcttt
      781 acataaataa taaataggtt atagaaagga atggagtatg aattttaaga agttttctca
      841 gctagggcag gcctttatgc tgccaatctc aattttgcct gttgctggtc tcttactggg
      901 aattggaggc gccttatcaa atagtaacgc cgtagcacaa tttcctgtat tggatcaagc
      961 gtggttgcaa gctgtattca ctatcatgag tacggcaggt agtgcggtat ttgcgaattt
     1021 agcattgatt tttgcaattg gtgttgctgt aggtttggca gatgctgata aggggactgc
     1081 tggcctatct gctggggttg catacttggt ttatacggct actattagtg gatttttaac
     1141 tctttttgca gataagggag caagcattga tactggagtt ttgggcgctt tagcgattgg
     1201 tatcactgtt gcaactttac acaataaata tcgaaaaatt gaattaccag cctttcttgg
     1261 tttcttcggg ggctctcgct ttattccaat tatttcatca tttgcagcaa ttgcgattgg
     1321 ctccattttt tatataattt ggccaccgat tcagaatttg ttagttgatt ttggtaaggc
     1381 aatagcagcg atgggaagtt ttggaacttt cttatatggt tttggattac gtttgacagg
     1441 tgcatttggc ttgcaccata ccatctatcc aatgttttgg tatacttcat taggtggaag
     1501 tgaagtggta gcaggtgaga caatccaagg tgcgcaaaat attttctttg ctcaattagc
     1561 agatgcgaat cacacaggct tatttactta tggaactcga ttttttgctg ggcgatttgc
     1621 aacgatgatt tttggtctac cagcatcttg tttggctatg tatcacgcaa ttcctaagga
     1681 aaatcgtaag aaggttggca gtttttattc aagtagcgca ttaacttccc tattgacagg
     1741 aattactgaa ccaatcgaat tttctttctt gtttgttgct ccatggctat atgttgttca
     1801 cgcattttta gatggactat cattcttagt ggcggatctc ctgcaaattc gtattgggaa
     1861 ctcattttct ggtgggctta ttgattactt gatttttggt gttttccaag gaaatgacaa
     1921 aaccaattgg atttacgtga ttcctgttgg cttgctttgg gcagcagttt attatctagt
     1981 tttcaaattt ttagtaacca aatttcacgt gctagttcct ggtatggaaa gcagtgatca
     2041 agcatcacat tctgaaaaag ttttatcaaa cggttctagt cttcgtgata atgcaattgc
     2101 tatcatcgat gctcttggtg gtgcagataa tattgagaat gtaactgcct gtgcgactcg
     2161 attaagagta tcgctcagaa atagtggtct tgtggataag ggagttattc agtctatagg
     2221 tgcaacggct gttttggatg taaaaggagg aatacaggct attttcggag gtaaggctat
     2281 cctgtatagc caagaaatca atcaaattct tggtcttgaa gaatagagtt atatttaagc
     2341 gaattaaaag cattcaaact gtacctatcg ggtatttttg aatgcttttt gttttattaa
     2401 ggctttttgt tttattaaga ttgttgtgaa atagaaagac ggatgaatta ttctctaatg
     2461 gtttgcttga aaatattctc ttttttctcc ttgtcaatag ctaaaaaata ggcgtagata
     2521 atatctagca tgatgaggag ggggatttgg ggtgaaatac ggttgccgta attgaggtgg
     2581 cggacagagg cgactggaat gatttggtca aaagttggat ggggaaaact cttagttgtt
     2641 aacagggcgg taggaatccc cttttgagca gccagctgga gatgttccat gacctcttct
     2701 gtctgaccag acaaagaaag gccgataacc aggcaactag ggtctaaaat agtagttgtc
     2761 caaataagat tgtttttatc agtaattgca tcacagacta cacccagtcg cataaagcgg
     2821 gatttaattt ccattgcaac caaaccagaa ctgccgattc cataaaaata gacacgcttg
     2881 ctactgtcaa tcagtttagc aatttcttcc aatttttcct catctaccag tttattggta
     2941 gcagttagga tttcctcata gtctaccaag actttttttg ttaggctccg ctgtaatttt
     3001 tcaaaatgtt tatccaagta ttcttggtta ttctgaaagg caaagacaaa ttctcgataa
     3061 ccggaaaatc cacatttttt ggcaaaacgg gtaagagcag atggagaaat gtggagttgc
     3121 tgtatagtgt tttcttgact aagatcggtg ctagatgggt ctaactgagt aaaataactg
     3181 gcaatctgct tttcaagtct agtcatctga tccagatgag actcaatgat ggcagtgata
     3241 tgtttcggtg tttgtaacat tttccattcc tctgatagct tctgaggaca ttataccact
     3301 aaaaccccct cattgatagg ttttatgata taatggaaac gtaaaaggaa tgtaagatta
     3361 tgtatattga aatgattgat gaaacagggc aggtttctgc tcaaatgcag gagcagatta
     3421 cggaattgct ccagtttgct gccgaaaaaa ttggcaagca gaataaggaa atggctgtga
     3481 cctttgtgga caataagcgt gtccatgagg ttaacttgga gtaccgtggg atcgaccgtc
     3541 ctacagatgt cgttagtcta gagtataagc cagagtcgga gattgttttt gatgaggaag
     3601 acttactgga caatcctgaa ttggctgaaa tgatggaaga tttcgatgcc tatattggtg
     3661 aattgtatat ttctatcgat aaggcgcgtg agcaagctga agattatggt catagctacg
     3721 agcgcgaaat gggcttttta gctgtacacg gttttctgca tattaatggc tatgatcatt
     3781 atacgccaga agaagaagca gaaatgtttg gtttacaaga agaaattttg acggcctatg
     3841 gacttacaag agaataattc aaaaaatcgc tggaaaaacc gagaattgat tgctagtcta
     3901 gaatttgcag taacgggttt gttgacggct ttcaaggaag aacgcaatat gaagaagcac
     3961 ctggcttcag ctattcttgt agtgcttgcg ggactgattt tccaagtatc tgtgacagaa
     4021 tggctcttcc tcttgctcag tattagtcta gttatcgctt ttgaaattgt gaattcggct
     4081 attgagaatg tggtggattt ggcgtcagac tatcattttt ccatgttggc aaagaatgca
     4141 aaagatatgg cagcaggggc agtcttgttt gtgtcaggat ttgccttgtt gacaggattg
     4201 attatctttg tgccgaaaat ttgggacttt attttttaga atataaggag aatacatgac
     4261 atttaagtca ggttttgtgg cgattttagg tcgtccaaac gttgggaaat caacctttct
     4321 caactatgta atggggcaga aaattgccat catgagcgat aaggctcaga ccacccgtaa
     4381 caagattatg ggcatttata cgacagaaga agagcagatt gtcttcattg acacaccagg
     4441 aatccacaag cctaagacgg ccttgggtga ctttatggtg gaatctgcct atagcaccct
     4501 tcgtgaagtg gatacggtcc tctttatggt gccagccgat gaaaaacgag gcaagggtga
     4561 cgacatgatt atggaacgcc ttaaacaggc caaggttcca gtcattttag tggttaacaa
     4621 gattgacaag gttcatccag accagctttt ggaacagatt gatgatttcc gtcaacagat
     4681 ggacttcaag gaaattgtgc caatttctgc tacccaaggg aacaatgtca accgacttat
     4741 ggaaattctc aaggaaaacc tggacgaagg cttccaatat ttccctgcgg accaaatcac
     4801 tgaccaccca gaacgtttct tggtatctga gatgattcgg gagaaggttc tacacctgac
     4861 tcgtgaggaa attccgcact ctgtagccgt tgtcatcgag tccatgaaac gtgatgaatt
     4921 taccgacaag gtccatattc gagcgacgat tatggtagag cgtgatagcc agaaaggcat
     4981 catcatcggc aagcaaggag ccatgctcaa gaaaattggt tccatggctc gtcgcgatat
     5041 cgaactcatg ctaggtgaca aagtcttcct cgaaacctgg gtcaaggtca agaaaaactg
     5101 gcgagacaaa aaactcgacc tcgccgactt tggttataat gagaaagagt attaaaaacg
     5161 tccgggggag tgaaacagtc taggaataga ctgtttcagc tggtcacata gaaatgtgaa
     5221 agtgaccatt tgaaaaaccg agcttggaaa ctagagagcg aggtagttcg ggggagtgaa
     5281 acagtctgtg aatagactgt ttcagcaggt catatagaaa tgttaaagtg accagctgaa
     5341 aacccgagct tagagattgg aaggcgagat agcctaggga taggctgtct aagtcaatca
     5401 cttagaaata gttagcagaa aagccgaaag gcttttactg cgttatggag aaatcttttt
     5461 agtgaacaag aaaggaaagc cgattaggtg ttgtcttgaa ctcgcctacg actctttgaa
     5521 aaaagacaac cgtgacctag gtgccgaagc accgtcggtc aggtttctat ttttctttga
     5581 cattgtaatt taattagaaa ggacgagtgt ttgcgtactt gaacccgagc taaaagctcg
     5641 gaaaatagat agagctcctt atgtgcaagt cacatagcgt cgctctcctt catcttgtta
     5701 tcattataga aaggaaagcc gattaggtgt tgtaattgaa ctcgcctacg actctttgaa
     5761 aaaagacaac cgtgacctag gtgccgaagc accgtcggtc aggtttctat ttttctttga
     5821 gtcgcttaac ggcttagtat cttagtatgc ccgaactgcc tgaggttgag acggttcgtc
     5881 gtggtttaaa tcggttggtc aagggaaagg tcatcgaaaa ggtcaaggtg acctatgctc
     5941 ccatgattaa gactggtgtg gatgcgtttt gtcaggactt gcttggtcag gagattttag
     6001 atgtggaccg tcgtggcaag tatctcttgg tttacctgac ggaccatgtc ctcatttccc
     6061 acttgcggat ggaaggtaag tacaatttct ttcctgacca ggtgcctgcc aacaagcact
     6121 ttcatgcttt tttcaccttt acggacggtt caagcttggt ttatcaagat gtccgcaagt
     6181 ttggcaccat ggaactgctg ggcaaggcag atgtggaagc ctactttatc agtcggaaaa
     6241 tcggtcctga gccgacggag gaagattttg acttggaagc ctttgctgct aagttggcca
     6301 agtcgaaaaa gcccattaag tcgcatcttt tggaccagtc tttggtggct ggtttgggca
     6361 atatctatgt agatgaggtt ctgtttagag cacaagttca tcctgctcaa gcaagtaatc
     6421 agctatcggc tgagcaggta actagcctcc gtcaagctac tatagaagtt ctgcaactgg
     6481 gtatcgaaaa aggaggctca accattcgga cctataagaa tgccttggga atggacggga
     6541 ctatgcagga ttatttacaa gtttatggaa agacagggca ggcctgtccc cgttgtcaga
     6601 cagagattgt caaaatccag ttgggcggac gggggacaca tttctgtccc aagtgtcagg
     6661 tgaaaaatgg ctaaagttat cggtataaca gggggcattg cctctggaaa atcaacagtc
     6721 acagcctttc tgcgacaaca gggctatcca gtcatcgatg cggatgcggt tgtgcatgag
     6781 ttgcaggcca agggcggtaa actctatcag gtcttactgg ctgagtttgg ggaagctatc
     6841 ctgtcagctg atggcagtct agatagggct aagctggggc aggctgtttt tgcggatagc
     6901 aagttgcggg ctcgtttgtc tgtcttgcaa gaccagatta tcaggcaaga attgttgact
     6961 agaagggatg ttctcaagca gacggaggat gtaattttca tggatattcc tttgctttac
     7021 gaggcggatt atagcgggga agtaaatgaa gtctggctag tttatgtcga tagagcacag
     7081 cagttggaac ggcttatgaa acgtaatggt ttagctgttc aagatgcgga aaatcgtctg
     7141 gctgctcagc tttctttaga ggaaaaacgg tcgcaagccc aggtggtgat tgacaatagc
     7201 ggagcggttg aggcgacctt agcacaggtt acgcaacttt tggaggaatt aaaggatgga
     7261 cgacggtagt agttattgga agcagaattt gaaggtggct tggttgggaa atttcctaac
     7321 agggacgagt tttaccttgg ttatgccttt tatctcggtt tttgtggaag agttgggggt
     7381 aggtcctgga caggtagaat attatgcggg gcttgcggta tctgttaatg cccttgcagc
     7441 agccttgatg gcgcctattt gggggagttt ggcggaccgt tacggtcgca agcccatgat
     7501 ggtgcgggct gcttttgcga tgatttttac tatgggtggt atggcctttg taccaaatgt
     7561 tttttggttg cttgccttac gtgtcctgaa cggggtattt acagggtaca ttcccaatgc
     7621 gactgccttg attgccagtc aggttccaaa ggataagacg gggtatgctc tgggtacctt
     7681 atcaacaggt gcggtagcgg gtaatttgat tggtccgacc ctaggtggta tcttagcaga
     7741 gatgtttggc gtgcatatgg tatttttgct ggtgggactt ctttatgcta tcgttgtgtt
     7801 actgaccgtt ttctatattc gagaggattt tgttccaatc aaaaaaggcg aagaaatgtc
     7861 ggttaaagag gtatttgagc aggtgaaaga tcggcagatg ctggttgggc tttttgtgac
     7921 ttctatgatc attattgcag ctgctcaggc tgttgttcct atattgaccc tctatgtgcg
     7981 gcatttggga cagacagaca atctgttatt tgttgctggt tttatcattt ccttgcctgg
     8041 tatggcatcg ctagtgacat caggttattt agggaaaatt ggtgaccgta ttggcaacca
     8101 tcgcctccta ttaattgctt tgacttacag tctgttgatt aatgttttct gtgtttttgc
     8161 agaaaatcct ttccagcttg gtttgttgcg attcatgtat ggttttggga caggagcatt
     8221 gttgccttcg gtcaattctc ttttgaccaa gttgacccca aaagaaggga tttcaaggat
     8281 attttcctac aatcaactct ttaataatct aggttctgtt gttggtccca tgatggggtc
     8341 tgcggtagct gctcacatgg gttatgactg ggttttctat ctgtcgagcg gacttgtcct
     8401 ctttaacctt atctggtctt tgaccaattt tagaaactat ttgaaagtaa gggatgttta
     8461 gtgagagtta aaatcaattt acaatgttca gaatgtggta gtaagaacta cttgactagc
     8521 aaaaacgcca agactcatcc agataagatt gaagtcctta aatactgccc aaaagagaga
     8581 aaagtaaccc tccaccttga aactaagtag gttttgtggt ataatgtcat aagttattgt
     8641 agaaagtgaa aaaaatatgt atcaagcatt attagcaatt ctgttgattt tatctgttat
     8701 tttgattgta gtgattttta ttcaaccggc taaaaaccag tctagcaacg tctttgactc
     8761 ttctagtgga gccttatttg aacgtacaaa ggcccgtggt tttgaagcgg tgatgcaacg
     8821 cattacagct attcttgttt ttctttggat gctggatgcg ctggcgcttg ttatcatttc
     8881 aagtaagtag ataaatcaga ctgggacttg ttcttggtct atttttttgg gagtgggcca
     8941 gaactcgaca agtataaaga gttcgtctgc ccaccctccg cataagttga ataggtatgg
     9001 ttcggagcgt tattcgcgaa ctattgagat ttgctttgca aatcctatct cccacctcca
     9061 acaatcattt gattgttgga gcaatcaacc actgcgtctg gatataacgc aaaatacagt
     9121 cttttagttt gcttttagta ctaggcaacg agctgcagac tgtactgaag tacaacaaag
     9181 cgagttcaaa taatgatgaa attatttgaa gttggaaata gggaaacgga gtttcctcgt
     9241 acgtcgcagt aataaaagat aaactaaagg actgaaagag aaatagtgct aggtttttat
     9301 cctgcactct ggtaaataca acatgaaaaa cgaaattata aactatatta aagaagttgg
     9361 tcctgtgacc atggatcaac tagcagacca gcttggagcc agttctgcca agagctttac
     9421 agacttggtc aagctggttt ctagcatgga aggtagccgt cagcttgtct ttgacaatgc
     9481 tgggcggatt actcttcctg ctccaaaaat ctccaagaac aaggtgacct tacaggggat
     9541 tttccgtgcc cataagtcag gctttggctt tgtgaccatt gacgaggagg aagatgatct
     9601 ctttgtcagc cgtgacgatg ttaactttgc tatcgaaggt gatagagttg agattgcaat
     9661 caaaaaggtt gcagatcgtc tcaagggaac tgctgcggaa gcggaagtca ttgatatttt
     9721 ggaacatagc ctgaaaacag cggtgggctt gattgtcttt gacgaagata agccagaata
     9781 tgcaggctac atcaagtcta aaaaccagaa aatcgctcag aagatttaca tcaagaagtc
     9841 acctctggta ttgaccggga cggaaatcct aaaagtcgat atcgaagcct atccaagcaa
     9901 gaaacgggac cactttgtcg caaccattcg ggacgtagtg ggccacaagg acgatgtggg
     9961 catcgatgtc ttggaagttt tggagtccat ggacatcgta tcggagtttc cagatgaagt
    10021 tttggcggag gccaaccgag taccagaaag tccgtctgag aaggactttg aaggacgctt
    10081 ggacctgcga gatgaaatca tctttactat cgacggtgcg gatgccaagg acttggatga
    10141 tgcggtccat atcaagcaac tcaagaatgg caatctggaa ctgggtgtcc atatcgccga
    10201 tgtcagctac tatgtgaccg aaggctcagc cttggatcag gaagctgtca aacgtggaac
    10261 ctctgtctat gtgaccgacc gtgtggtgcc aatgctgcca gaacgcctgt caaacggcat
    10321 ttgctctctt aatccaaacg tggaccgcct gacccagtcg gctattatgg aaattgaccg
    10381 caagggcaag gtggtcaagc actggattgg ccaaacggtt atcaaaacca ccttccgtat
    10441 gacctattcc gatgtcaatg acatgattgc aggtaacaag gaaaagctgg acaagtacaa
    10501 ggcaatcgta ccgagtgtag agctcatggt caaactccat gaaaccctgg aaaccatgcg
    10561 ctacaagcgt ggtgctctca actttgatac agctgaagct aaaatcatcg tcaacaagga
    10621 tggtctgcca gttgatatcc agctgcgtca gcggggcatt gccgagcgga taattgagtc
    10681 ctttatgctg gcggccaacg agtgcgttgc tgagcatttt gccaagctgg acctgccttt
    10741 catctatcgg attcacgagg agcctaagtc ggacaagctg cagaagttca tcgactatgc
    10801 gaccagcttt ggtctgacgg tatatggtac ggccagctct atcagccagg acgctcttca
    10861 ggacctcatg gagcgggtca aggatgaacc ctatgcggat gtcctcaaca tgatgttgct
    10921 ccgttctatg cagcaggcac gctactcgga gcacaaccac ggccactacg gactgggtgc
    10981 ggagttctac actcacttca ccagtcctat ccgccgctat cctgacctgc tggttcaccg
    11041 tatggtgcgg gagtatggtc acaattctgt ggaaaaagca gagcattttg aacaggtcat
    11101 ccctgagctt gccaagtctt cgtccagttt agaacgccgt gccattgagg cagagcggga
    11161 agtcgaagcc atgaagaagg cagagttcat gcaagaattt gttgggcaag agtttgatgg
    11221 tgttgtgtct agcgtagtca agtttggtct ttttgtcgag ttaccaaata ccgttgaagg
    11281 cctgatccat attaccaacc tcaacgaata ctaccagttc cacgagcgaa cgctgacctt
    11341 gcagggtgag aaatctggtc gtgtcttccg tgttggtcag ccaatccgta tcaagctaac
    11401 gcgggcggac aagatgacag gggaaatcga ttttgcccac gtgccgtccg agctggatat
    11461 tgtggaaaaa gctctgaaag ccaagcggag aactgctagt cactccaacc gtgaccgtga
    11521 tgatcggtca gggcgaggac ggggcaagca ccacaaacaa gaagctgctg gtcgcgacag
    11581 cggacgtcac aagtctggga aagaccacaa gtcaaaaagt ggtaaaaaag acaagaaaaa
    11641 gaaaccattt tacaaagaaa tggctaaaaa gaacaagaag aaaaggagat aggcatggcc
    11701 aagggtgagg gcaatgtgat tgcgcagaat aaaaaagccc gccacgacta taccattgtc
    11761 gatacagtgg aggcggggat ggtcctgacg gggacggaga ttaagtctat tcgtgcgggg
    11821 cggatcaacc ttaaggacgg ctttgcccaa atcaagcagg gcgaggcttg gttggtcaat
    11881 gtccatatcg ctccctacga tgagggcaat atctggaatc aggagccaac gcggacccgc
    11941 aagctcctct tgcggaagaa gcaaatcgag tctttgggca atgaggtcaa gggaacaggg
    12001 atgactctgg tgcccctcaa ggtctatatc aaggatggct ttgccaaggt cttgattggg
    12061 cttgccaaag ggaagcacga ctacgacaag cgagagtcca tcaaacgccg tgagcaagac
    12121 cgtgatatca aacggaccat gaaggcgatt aatgcgagat gagtttggtg tgttagtatc
    12181 caattcattg aataacagtc ataaaaacga atacaatagt tcaaatatca gaatgaacta
    12241 ctgtgttcgt ttttattata ggaggtctat tctaggttca ttttatgttt agtgttaaaa
    12301 agtaaaa
//
LOCUS       DBNFCX010000067        12150 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.067, whole genome shotgun sequence.
ACCESSION   DBNFCX010000067 DBNFCX010000000
VERSION     DBNFCX010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 12150)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12150)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12150
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.067"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(179..1110)
                     /locus_tag="AC1PJC_001614"
                     /pseudo
     CDS             complement(179..1110)
                     /locus_tag="AC1PJC_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004233681.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
     gene            complement(1399..1698)
                     /locus_tag="AC1PJC_001615"
     CDS             complement(1399..1698)
                     /locus_tag="AC1PJC_001615"
                     /inference="COORDINATES: protein motif:HMM:NF045019.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620597.1"
                     /translation="MVSSLQHKYSIVPELCNLVSIAGKLSLKVVPHLSSSIKNEEIQQ
                     ILDYLGTIEILGEFELTIFAFTLTHCPYEMVCYRIRKLIEFVSTTEFSKNESYPI"
     gene            1943..2257
                     /locus_tag="AC1PJC_001616"
     CDS             1943..2257
                     /locus_tag="AC1PJC_001616"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620598.1"
                     /translation="MAYVIDHEKLKAKNIIIDSLRQEMNEINHQSNALEQSLLSLVTS
                     YFETGISSTGDRVSLELRQVKDRLLHMTGELEAAIHFAEKLDVLTWVEDDDDGQANSR
                     YY"
     gene            2229..2957
                     /locus_tag="AC1PJC_001617"
     CDS             2229..2957
                     /locus_tag="AC1PJC_001617"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620599.1"
                     /translation="MDKQILDTIDFSKISSISPYVKRVSPNDVFFSTLQMEGFSWNHN
                     NNNQNFYKKIVSNLNKVEQLLDRGLDLDSIKQRYPESAAIIDGNYGTNTIQVYQTSDG
                     KFLFSGNDGRHRLRMAQKLNIPSVTVKIIGVYRQPILTTSSIPTPSPLISTSSGIATM
                     ELLGEGIIHIHKQIEVQQSSFNNESARLNHLGKLVSYYFSDQDEGRLIVDLLNSKQTT
                     LNNLNKILSGVQQILEEYRKKINS"
     gene            2969..5407
                     /locus_tag="AC1PJC_001618"
     CDS             2969..5407
                     /locus_tag="AC1PJC_001618"
                     /inference="COORDINATES: protein motif:HMM:NF013727.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsK/SpoIIIE domain-containing protein"
                     /protein_id="HIP6620600.1"
                     /translation="MNKRLDVLDYLQLGTINLQFIGKGNIWLEDRFDDATKMLVQYFL
                     SEALIKTSVGQIEVVTYDGFLSGVFAPFSSLSSGENKLMRQLSSETELLHYLLYLKEH
                     IRGIQNLIQGNAPSLYKLRSDNQQVIESYKLIIIYTDIELLDSKIKNILGLLSRVGPA
                     AGVSFLIISSKSNLPFNGRSNYQMIDTYQGQLECDNHQVSIPTISISKIHERNNSLLQ
                     ETRRTESEVLPFLSLPRMVNESGKAWSAESVDGLTFSIGKYGLEAVSITLGDELNQRH
                     NMLITGAVGQGKSNLLSVIIHSLCQNYSPRELQLFLLDFKEGVSLKAFSNIDKEDFLP
                     HARALGLESDVSFGLSIMTYLYQEYKRRLELFKKHNKKSIKEFREAFPNQVLPRIVCI
                     IDEFQLMFGDKSDEGRVIADYLEKSVRLFRAAGIHFILSSQTIGGNQILIGRMDSIFS
                     QIPIRIAHKNSIAESQMTLGQGNFAAAYLKPREAIVNLDYGEVSQNKKVFVAYADEKV
                     LNPIRFKWWEATKEKLSPPTIFSGSQLITLTGRSDILKLRQAKEKELEGGAVFGRGIS
                     VRHSLVMSRLRREIGHHIAILGAANSKNNQALGIVQSVAISLAYLEQEIDPQFIFCHT
                     FEKNSSEEKHINSIVVSLKELGVSLKVITPEEFQTTLNQVLEERKSQSLKNTGNVYIF
                     GLGMDRIRLQQGVDNLGFLPPGTGPLTSFLEEAADLGIHFIGWWIKVKSLEKQAFGIG
                     IRNDLINTKIFLRVGEQSIKQFTGPFYSWQPEANRALYLDEVASEQPIPFIPFSPMNL
                     NECQYVIKKLKGGE"
     gene            5409..5666
                     /locus_tag="AC1PJC_001619"
     CDS             5409..5666
                     /locus_tag="AC1PJC_001619"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620601.1"
                     /translation="MSVQVLIQSILQLNQELNQQVQVMTALTHSVNQLKTEIHTNFSS
                     TNVSQRLLSPLDATKQSLETAIPSTQKAKLTLEQLTATLRG"
     gene            5668..7227
                     /locus_tag="AC1PJC_001620"
     CDS             5668..7227
                     /locus_tag="AC1PJC_001620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620602.1"
                     /translation="MIDLYKILEIDPSKPITEIREYLDRNKITWENNAHNRGDADSVQ
                     KVKFLNEAYNIFSSQTSRDKYDKELQDFLNPPIQSDPREVKCQEYTRKAEDYIKSKEF
                     DLAEKAINQALSYREDDNIKLLKMAAHIYDCLNNTGQALNYINEAIVIDSQDQQNYKL
                     KLVILLHDFDIAKQTKFIDKDNLNKKTEAIRQYILEGFIRGMNPQSDKEYLDTCNFIL
                     KSVKKTNHGSFFRKSINRHYRDAYRKKSLSVREEEYYRVAVSQFYGSNTGNDLATLQY
                     CKSILKQSPNSQIAREYIERYERRAEEQRLLQKKEEKELLHLMDNRNQLIKKRDQLEK
                     KNSEIQSNIQGLEQSRSQLDSSITEAYGERSKLVEEINGFGIFSYLFIGVVLFIFGVI
                     IIGFMVGMFSLQVSVGQVMFMSITLSGIYTFRNILKILKIPELTKQIDSLSQRLDAKN
                     KKLLILRDDLINNEQSYRQLQQAINNLSEQINSSIMRGNLPIQQTLSWKSNTSKLSGA
                     KNKIKVSSAKQ"
     gene            7255..7515
                     /locus_tag="AC1PJC_001621"
     CDS             7255..7515
                     /locus_tag="AC1PJC_001621"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620603.1"
                     /translation="MNVQQLQALIAQLEQECQEAMKRLSAGQQNLSQLTMHIHHYTNG
                     SNSGRVATQVTQEAAMQLRDALANIQSLKRELKAYLNSISNN"
     gene            7638..8462
                     /locus_tag="AC1PJC_001622"
     CDS             7638..8462
                     /locus_tag="AC1PJC_001622"
                     /inference="COORDINATES: protein motif:HMM:NF012321.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vWA domain-containing protein"
                     /protein_id="HIP6620604.1"
                     /translation="MSQEGTYALLPLYLVLDSSASMNGEPFRAALSFVPKLLEAMQEN
                     PTVADKVRLAVITFDATARVAATLSDKSDLENWYLNNKDMQAEGSSTNYTNVFKLLKQ
                     EVERGVATITSEKINGEFYKTYRPAVFFITDGDPVGDNETTIAQAFNDLTDENFIDSK
                     GRRIRPNIFVVGVGDATKEKLEKYGASRYKRSEYTIHNSEAVLVRTIRDGVDFTPASV
                     LSSVVPKLVSSIISSTNTGGSSASHSGDLEDPLGDVEDLFGLDGDDIEFDYDDFDF"
     gene            8505..9638
                     /locus_tag="AC1PJC_001623"
     CDS             8505..9638
                     /locus_tag="AC1PJC_001623"
                     /inference="COORDINATES: protein motif:HMM:NF025053.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HIP6620605.1"
                     /translation="MEFEDKLVNDTGNSSEGGVTIFESEESPNERMSVSHEQLEAAMP
                     NSRQAKNNFATLGDEVVSSSSDEIMTLGQDFRLIDNRYVIGEPAGTFYQKPSGLAQQN
                     MPIFRNDNVSDALQIGRSLLLAASSKGSLHQAGESPRQDSYSYGVYEENGEKWIILAI
                     SDGVSSSPYSHILAEHLTFSSVKELKLQLEAYGEVYVQDFAHKINQMANNFCRKQLVR
                     FNQQFDESKYVAHLGANFFGATLECAVIHIIQDKQTVKQFTISGDGGAYIFKSSSKID
                     IIKSGKIRGEGIVSNAVSPLPLGDIDDVNIEEVRLEKGDIFFMATDGLSDFIGSGNSS
                     LGKFLLEKIVEAKDAVEFLKIINVAMFQLDDDKTAVCFKAEGD"
     gene            9640..10560
                     /locus_tag="AC1PJC_001624"
     CDS             9640..10560
                     /locus_tag="AC1PJC_001624"
                     /inference="COORDINATES: protein motif:HMM:NF019334.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase domain-containing protein"
                     /protein_id="HIP6620606.1"
                     /translation="MVNISKTDFQQKSQKLGSGTQGSVYLYPLRTKTGQTKEVAVKIY
                     RNKSLDNNNLQIETHLQRLLGTFRRMPENELKILKTATTMIIDTVKIDDKFKGYVMRK
                     IPEMYLPKKKSLYSDEVKIVERTLAYALNDDETKLKLQEPIISVTGRKIILLKLLYVM
                     SIFHRNDIIVGDISPNNILVYVDPVDQKKNSILFLDTDSFRTKNAMFPLYQPHTPNWI
                     PPECRNSVSDINKFFQSKQTDVWKISILILRLYYFGPQRTAIESSDESINRISSEVSK
                     EFSALIQRGLDKNPDNRPSILEILNALRKG"
     gene            10742..>12150
                     /locus_tag="AC1PJC_001625"
     CDS             10742..>12150
                     /locus_tag="AC1PJC_001625"
                     /inference="COORDINATES: protein motif:HMM:NF014543.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620607.1"
                     /translation="MIDLLVIIVSKESSYVNQPEAFFNKFFEMNHAALTVLLIFANQG
                     KFQKVACGEFEFKEDFPSFSPFVKGSDETEITDWIEEAIVYRQLNLLPTDTIDYFYGQ
                     PRKVTDTSASFELTSSDDSEYGKLMAKKPEKPSKLLSNIFVQYSNYQGELDYFSEYTY
                     GTRDYGTYKLEGFWRNGLSPTGFMKRITDSETSIDYFNKQGELVKNFSRGEAIRTWSL
                     IRKLRKIDMHLYQMDDVDILPYCEMENKSGLKRQGEIKFSTGKLNGLGSEYYSSGDKY
                     HGQFKDGYQHGVGTYYFVNGDIYHGGFKDSKFHGKGLMIWSNGDVYEGDFIEGKRTGN
                     GILQKGDGNIYVGDFIDGKSTGYGWEFFKDGRIYVGPYGDIKDGEATIYFENGTIIVF
                     EWNEGKQSEQFRKLLPSGEIIFGTLHNGKDSNEKQAEDSNVKQFVSHRIISKKDNQKY
                     AGLNRNDICSCGSGKMYKN"
BASE COUNT         4096 a         1820 c         2527 g         3707 t
ORIGIN      
        1 gtagcagaga aattaaatga ggtcatcagg gagtttaatg tccttaattt gtattaaaac
       61 catatagtaa tcgttgcggt gttgattaaa gcaataatct tgaaaagttt cagagcagca
      121 tttgaagaaa tcgagaacct ttttgcatga taaattgcaa gaataagtgc aacttttact
      181 aaacttcact catgaacgcc tcgaaatccg ttttgtaacc cagacatttt cgtggacgat
      241 ggttgatggc ctgtaacgcc gtccttagtt cttcatcact gattgtcgct aaatccgtct
      301 tctttggaaa atattctcgc aataatccgt tggaattctc attgcttcct ctttgccaag
      361 aggaataggt atccgcaaag tagaaatcaa ttcccagctc atctaccaag ggatgacagg
      421 cgaaatcttt ccctctgtca gatgtaaagg tcttcagaaa gtcgttggat atcaacttgc
      481 atagttcttg aatagctgaa aacatagatt tggaagtgcg gtcaggtatc ttaaatgcca
      541 agtacaagcg tgtcttctgt tcgacaaaag ttgccaaaca ccctctactc tttcctcgtg
      601 aagagacgac agtgtccaat tcctaatgac caattgtttt tcttgttttg acttccttag
      661 gacgtttgga aatagaggtt ccaatggtaa attttcctcg tgtttcttga ggaaatcgac
      721 tttttccttt acgtcttaaa acagacagag tgcagtctat cttccctgca taaagccaat
      781 tatagatgct tttgaaggac accattggtt tgttttcaaa ctgatagcga ccagaaattt
      841 attctggaga ccaggaagat tgcaatcgtt cttcaatttc ttgcttcaat tcaggcgtcc
      901 aactcgattt tcttcccctc tgcttagcta gttgctcata gtgcttttgt gttgcttgtg
      961 cagagtaagt gccattacaa cgccttaatt ctcttgaaag ggttgattga tgaacgccta
     1021 attttctcgc tatttggcag ggggtgagac ctaattctag ataagtctct atcttagttc
     1081 gttccgttat ggttcatggt ggtagctcat agatttctcc cgtgttctgg tcagtgtggt
     1141 tacttacagt ttacatgagt ttgaactcta tgagtttttg gttacactat attttataat
     1201 ttatcgcata aataagtccc tttagatcat tttgtcgtag gagggttgtt gctttaactg
     1261 acagtatgtg tacacgaaaa tgggtaagat agaacatgct gtctctttct aggaatttct
     1321 ctacttgatg aataacgtaa tgtgcttcat tgaaatagcc atttttagag taatagggca
     1381 tcgcccaaag gaatagttct aaataggata tgattcgttt tttgaaaatt ccgtcgtcga
     1441 aacgaattct atcagttttc taatcctata gcacaccatc tcatagggac aatgtgttaa
     1501 ggtgaaggca aatatagtca gttcaaattc tcccaaaatc tctatagtac caaggtagtc
     1561 taaaatttgt tgaatttctt catttttgat tgatgagctg agatgaggta ctactttgag
     1621 agatagtttt ccagctatgc ttactaagtt gcaaagttca ggaacaattg agtatttgtg
     1681 ttgcaagctg gagaccatct aaatagtttt ctggatatga ttaagctcca aggtaattac
     1741 gaggttttca attgatggat agtgataatg ttcaattagg tttgtccaag ttgcaccaat
     1801 ccgtagtaag agcgtaggtt ttatattttc tgagatagtt cttattttct tgtgtagact
     1861 atctttgata ggagtaaggc tctcataata aattgaatag acttactcaa ttgtgataaa
     1921 taattattgc ggaggaagag atatggcgta tgttattgat catgaaaagt tgaaggctaa
     1981 gaatattatt attgacagtt tgaggcaaga aatgaatgag attaaccatc aatcgaatgc
     2041 attagagcaa tcgttactca gcttggtcac ttcatatttt gaaactggaa tttcatcaac
     2101 tggtgatcgg gtgagtttgg aactgagaca ggtgaaagat aggttgttgc atatgacagg
     2161 cgaactagaa gcagctatcc atttcgcaga gaaattggat gtgttgacat gggtggagga
     2221 tgatgacgat ggacaagcaa attctagata ctattgattt ttcaaaaatt tcttcgatat
     2281 ctccatatgt aaagagagtt tcaccaaatg atgtgttttt tagtacctta caaatggaag
     2341 gtttttcttg gaaccataat aacaataatc aaaatttcta taaaaaaata gtcagtaatc
     2401 ttaacaaagt tgagcaacta cttgacaggg gattagattt agactcaatt aagcaacgtt
     2461 atcctgaatc agccgctatc attgatggaa attatgggac gaatactatt caggtatatc
     2521 aaacaagtga tgggaaattt cttttttctg gtaatgatgg aaggcatcgg ttacggatgg
     2581 ctcaaaaatt aaacattcca agtgttactg taaaaattat aggagtatat cgtcaaccaa
     2641 tcttaacaac aagcagtatt cctacacctt ctccacttat ctctacatca tctggaatag
     2701 caacaatgga gttgttgggg gaaggaatta ttcatataca taagcagatt gaggttcagc
     2761 aatcaagttt taacaatgaa tcagctaggc tcaatcatct cgggaaacta gtatcttatt
     2821 atttttctga tcaagatgag gggagattaa tcgttgactt gctgaatagt aagcagacta
     2881 ctttaaataa tttaaataag attttgtcag gtgttcaaca gatattagaa gagtatcgta
     2941 aaaaaataaa ttcttaggga gataagctat gaataagcgg ttagacgttt tggattatct
     3001 acagttaggt accatcaatc ttcagtttat tggaaaaggg aatatttggt tagaagatcg
     3061 ttttgatgat gcgacaaaaa tgctagtaca gtacttttta tcagaggcct tgataaagac
     3121 tagtgtagga caaatagaag ttgttactta tgatggtttt ttatctggtg tatttgctcc
     3181 tttttcctcc ctttcatcag gtgagaataa gctaatgaga cagttatcat cagagacgga
     3241 gttacttcac tatcttcttt atctgaaaga acatatccgg gggattcaaa atttaattca
     3301 ggggaacgcc ccctctctat ataaattacg ttcagataat caacaagtga ttgagagtta
     3361 caagttaatt atcatctaca cagatataga acttctagat tccaaaataa agaatatatt
     3421 agggctactt tcacgtgttg gtccagcagc gggagtttca ttcctaatta tttcttcaaa
     3481 aagcaatctt ccatttaatg gacgaagcaa ctatcaaatg attgacactt atcaagggca
     3541 gttggaatgt gacaatcatc aagtatccat accaacaatc tccatttcta aaatacatga
     3601 gcgaaataac tctttattgc aagaaactag aagaacagaa agtgaggtgc ttccgttttt
     3661 aagtcttcca agaatggtaa atgaatcagg caaggcatgg agtgctgaga gcgtggacgg
     3721 attaacattt agcataggta agtatggttt agaagctgtt tcaattacac taggggatga
     3781 actaaatcaa cgacacaaca tgttgattac aggtgctgtt ggtcaaggga agtccaattt
     3841 actatctgtt attattcata gtctttgtca aaattattcc cctcgagaat tgcagttatt
     3901 tttactagac ttcaaagaag gtgtgagcct taaggctttc tcaaatatag ataaagaaga
     3961 ttttctaccg catgcccgtg cacttggact tgaaagtgat gtcagttttg ggttatctat
     4021 aatgacctat ctctatcaag aatataagag aaggcttgaa ttattcaaaa agcataataa
     4081 gaagagtata aaagaattta gagaagcttt tccaaatcaa gttttaccac gtattgtgtg
     4141 cattattgat gaatttcagt tgatgtttgg ggataaaagt gatgagggga gagtgattgc
     4201 ggattattta gaaaaatctg ttcgtctctt tcgagctgcg gggattcatt ttattctctc
     4261 ttcacagaca attggaggga atcaaattct catcggtcgt atggacagta tatttagtca
     4321 aattccaatt cgaatcgctc ataaaaattc tattgcagaa tcgcagatga ctttgggaca
     4381 agggaatttc gcggctgctt atctgaaacc gagagaagca attgtcaatc tggactacgg
     4441 tgaagtaagt cagaataaaa aagtttttgt agcttatgca gatgagaaag tactaaatcc
     4501 gattcgtttt aaatggtggg aagctacaaa ggaaaagctg tctcctccaa caatctttag
     4561 tggctctcaa cttatcacat taactggccg atcagatatt ttgaagttgc gacaagctaa
     4621 agagaaagaa ttagagggag gagctgtatt tggtcgtgga atttcagtaa gacatagtct
     4681 tgtaatgtct cgcttgagac gagaaattgg tcatcatatt gcaatattag gagcagcgaa
     4741 ttctaagaat aatcaggcat taggtatagt tcagtcagta gctatatctt tagcttactt
     4801 agagcaggag atagacccgc aattcatatt ttgccataca tttgagaaga atagttctga
     4861 ggaaaaacat ataaatagca ttgtagtaag tttgaaagaa ctaggtgttt cactcaaagt
     4921 aattactcca gaggaatttc aaactaccct caatcaagtg ttggaagaaa gaaaatctca
     4981 gtcattgaaa aatacgggaa atgtttatat tttcggtctt ggaatggatc gaatccgtct
     5041 tcaacaagga gtagataatt tgggctttct tcctccaggt acaggtcctc tcacatcatt
     5101 tttggaagag gcagctgacc ttggaattca ttttataggg tggtggataa aagtgaaaag
     5161 tttggaaaaa caggcttttg gtattggtat tcgtaatgat cttattaata ctaaaatatt
     5221 tttaagggta ggcgagcaat ctatcaaaca atttactggt ccattttact cttggcaacc
     5281 agaagcgaat cgtgccttgt atttagatga agtcgcttct gaacagccga taccgtttat
     5341 tcctttttcg ccgatgaact taaatgaatg ccaatacgtt ataaaaaaac ttaagggagg
     5401 agaataaaat gtccgttcag gtattaatcc agagtatttt gcagttaaat caagaattga
     5461 accaacaggt tcaggttatg actgccttga cccatagtgt taatcaatta aaaacagaaa
     5521 ttcatacaaa cttttctagt acaaatgtat cacagaggtt attatctcca cttgatgcga
     5581 cgaaacagtc tttagaaact gccataccat caactcaaaa agccaagcta acgcttgagc
     5641 agttgactgc tacattgaga ggttaaaatg attgatttat acaaaatttt agagattgat
     5701 cctagcaagc ctataacaga aattcgggag tatctcgatc gtaataagat aacatgggag
     5761 aataatgccc acaatcgtgg tgacgcagat agtgttcaaa aggtaaagtt ccttaatgaa
     5821 gcatataata ttttttctag tcagactagt cgagataaat atgacaaaga gttacaagac
     5881 ttcctcaatc caccaattca atctgatccg agggaagtta agtgtcaaga atatacaaga
     5941 aaagctgaag actatataaa aagcaaggag tttgacttag ctgaaaaagc tatcaatcag
     6001 gctttgtctt atcgcgaaga tgacaatatt aaattgttaa aaatggctgc tcatatatat
     6061 gattgcttaa acaatacagg tcaggccttg aattatatta atgaagctat tgtgatagat
     6121 tctcaggatc aacaaaatta caagttaaaa ttagtgatat tattgcacga ttttgatata
     6181 gcaaaacaaa caaaatttat tgataaagat aatctaaaca agaaaactga agcaataaga
     6241 cagtatattc tcgaaggatt tataagagga atgaatccgc agagcgataa ggaatatcta
     6301 gacacctgta actttatttt gaagtctgtc aagaaaacca atcatggttc gttttttaga
     6361 aaatccataa acagacacta tagagatgcc tataggaaaa agtctttatc tgtgagagag
     6421 gaagaatatt atagggtggc agtgtcgcaa ttttatggtt caaatacggg taatgattta
     6481 gctactcttc aatattgtaa aagtatttta aagcaaagtc caaattcaca gattgctagg
     6541 gaatatattg aacggtacga aagaagagct gaagaacaac gactcctgca aaaaaaggaa
     6601 gagaaagaac tactgcatct aatggataat cgaaatcaat tgataaaaaa acgagatcaa
     6661 ttggagaaaa aaaattcaga aattcaatca aatatacaag ggctggagca aagtaggagt
     6721 caacttgatt ctagtataac agaagcatat ggagaaagaa gtaaattagt tgaagaaatc
     6781 aatggatttg gaatattttc ctatctcttc attggagtag tattgtttat ttttggggtt
     6841 ataattattg gtttcatggt tggaatgttt agtttacaag taagtgtagg acaagttatg
     6901 ttcatgtcga taacgttatc tggtatatat acttttagaa atattttgaa aatacttaaa
     6961 attccagaac tgactaaaca aattgattca ttaagtcagc gattggatgc aaaaaataaa
     7021 aaactactga ttttaaggga tgacttaata aacaatgagc aatcttatag acagcttcaa
     7081 caagctatta acaatctttc tgaacaaata aacagcagta taatgagggg taacttgcca
     7141 atacaacaaa cattgtcatg gaaatcaaat actagcaaac ttagtggtgc aaaaaataaa
     7201 attaaagtta gttctgcaaa gcagtaggat tagaaaaaat ggaggtattt aatcatgaac
     7261 gtgcaacaat tgcaagcact tattgctcaa ttagagcaag agtgtcagga ggctatgaaa
     7321 cgtttgtcag caggtcagca gaatctaagc caactgacca tgcatatcca tcattataca
     7381 aatggaagca attctggaag ggtagctact caagtaacgc aggaagcggc aatgcagcta
     7441 cgagatgctc tagctaatat tcagtctttg aaacgagaat tgaaggctta tttgaacagt
     7501 atatcaaata actaaaacct gaggaggaag gtatggaagt tgtagcaaat tttatctcaa
     7561 accatccacc ctagcaaaca tgctatacac gcttgcgaat tactacataa aattaagaga
     7621 ttaaaggagt ttttatcatg tcacaagaag gaacttacgc attattacca ctttatttag
     7681 ttttagactc gtctgctagt atgaatggag agccttttag agcagcactc tctttcgttc
     7741 caaaactatt agaagctatg caagaaaacc ctacagttgc agataaggtg aggcttgctg
     7801 taattacatt tgatgcaact gctagagtag cggcgacctt atcagataag agtgatctgg
     7861 aaaactggta tctaaataat aaagatatgc aggcagaagg aagttcaaca aattatacaa
     7921 atgtttttaa gctattgaag caagaagttg aacgcggagt agctaccatt acatctgaaa
     7981 aaataaatgg agaattctac aagacttata gacctgcggt attctttatt accgatggag
     8041 atccagttgg agacaatgaa actacgatcg cacaagcatt caatgattta accgatgaga
     8101 atttcataga tagcaaagga agacggattc gaccaaatat ttttgtagta ggtgtaggag
     8161 atgcaactaa ggaaaaattg gaaaaatatg gagcgagccg ttataaacgt tcagaatata
     8221 caattcataa ttccgaagca gtattggtta gaacaattcg tgatggtgtg gattttacac
     8281 cggccagcgt attatcaagt gtagtaccga aacttgtttc ctcaatcatc tctagtacaa
     8341 atactggtgg aagcagtgca agtcattcag gtgatttaga agatcctctt ggagacgtag
     8401 aagatctttt tggattagat ggggatgata tagagtttga ctacgacgat ttcgatttct
     8461 aaattccatg attttggtat tgggatagat tgggagggaa atttatggag tttgaagata
     8521 aattagtaaa tgatacgggt aattcaagtg agggaggagt gactatattt gagtcagagg
     8581 aatctccaaa tgagagaatg tctgtgagtc atgaacagtt agaggcggca atgcccaatt
     8641 ctagacaagc taaaaataat tttgcaacgc taggggatga ggtagtaagt tccagtagtg
     8701 atgagattat gacattgggg caggattttc gcttgataga taatcgctat gtaattgggg
     8761 aacctgctgg aacattttac caaaaacctt cgggtttagc tcagcaaaat atgccgatat
     8821 ttagaaatga taatgtatca gacgctctgc aaatagggcg ctctttactg ttggcggctt
     8881 catcaaaagg tagtttgcat caggcaggtg agagtccaag gcaagatagt tactcttacg
     8941 gcgtgtatga ggaaaatgga gaaaagtgga ttattttggc tatttcagat ggagtctctt
     9001 cgtctccata ttctcacatt ttagcggaac atctaacatt tagtagtgtg aaagagttaa
     9061 agttgcagtt ggaagcttat ggagaagttt atgttcaaga ctttgcacat aaaataaatc
     9121 agatggcaaa taatttttgc cgaaagcaac tagttcgctt taatcagcag tttgatgaaa
     9181 gtaaatatgt tgctcatctg ggggctaact tctttggggc cacacttgag tgtgcggtaa
     9241 ttcatataat tcaagataaa cagactgtaa aacaatttac aatatctggt gatggcggag
     9301 catatatttt taaatcaagc tctaagatag atattattaa atcaggcaaa attagaggtg
     9361 aagggattgt ctcaaatgca gtctctccct taccgctagg cgatatagat gatgtaaata
     9421 ttgaggaagt ccgtttagaa aaaggagata tatttttcat ggcgaccgac gggctatcag
     9481 atttcattgg ctctggtaat agtagtttag gtaagttttt attagagaaa atagttgagg
     9541 caaaggatgc agtagaattt ctgaagatta ttaatgtcgc catgtttcaa ttagacgatg
     9601 ataagactgc tgtatgcttt aaggcagaag gagactagaa tggttaatat ttctaaaaca
     9661 gattttcaac agaagtctca aaaattaggt agcggaactc aaggaagtgt atatctgtat
     9721 cccttgcgta ctaaaacggg tcagacaaag gaagttgctg tcaaaattta tcgtaataaa
     9781 tccttagaca ataacaattt acagattgag acacatttgc agcgtttatt agggacattt
     9841 aggcggatgc cagaaaatga attaaaaata ttaaaaacag ccactactat gattattgat
     9901 actgtaaaaa tagatgacaa attcaaggga tatgttatgc ggaagattcc tgaaatgtat
     9961 cttcccaaaa agaagagttt gtattcggac gaagttaaga ttgttgaaag gactcttgct
    10021 tatgctttga atgatgatga aacgaagtta aaattacaag aacctattat tagtgtgaca
    10081 ggtagaaaaa taatcctctt aaaattatta tatgtaatga gcatttttca tcggaatgat
    10141 atcatagttg gtgatatcag cccgaataat attttggtct atgttgatcc agtcgaccaa
    10201 aagaaaaata gcattttgtt cttagacact gattctttta gaacaaaaaa tgctatgttt
    10261 ccactgtatc aaccacatac tcctaactgg ataccaccag agtgtcgcaa ttcagtttca
    10321 gatataaata aatttttcca gtccaaacaa actgatgttt ggaaaatatc tatacttatt
    10381 ttacggttgt actattttgg cccgcagaga acagccatag aaagttcaga cgagtctata
    10441 aatagaattt cctctgaagt atctaaggag ttttcagcct tgatacaaag aggtttagat
    10501 aagaatccag ataataggcc tagcattttg gagatactta atgcactaag aaaaggctag
    10561 ctggtagacg gtaaaaatta tcaggtgggt tgtcaataga acagcctcct tgataaatat
    10621 tctagtaatg agtgaagtgc tgtaaacaac agagataacg gtagatgttt atgtttgtac
    10681 cagagagggt ggcaaccgtc atagttctac tgatgaataa gaaatgtgtt tagggggaga
    10741 tatgatagat ttattggtga taattgtaag taaggaaagt agctacgtta atcaaccaga
    10801 ggcatttttt aataaatttt ttgaaatgaa tcatgctgct ttgacagttt tattaatttt
    10861 tgcaaatcaa gggaaatttc aaaaagttgc ctgtggagaa tttgaattta aggaagactt
    10921 tcctagtttt agtccttttg tcaaagggag cgatgagact gaaatcacag actggattga
    10981 agaggccata gtttatagac aattaaatct actgccaact gataccatag attattttta
    11041 tggacaacct cgaaaagtaa ctgatacctc tgcaagtttt gagttaactt cttcagatga
    11101 ttcagagtat gggaaattaa tggctaaaaa acctgagaaa ccttccaaat tacttagcaa
    11161 tatttttgtc caatatagta attatcaagg ggaacttgat tatttttctg agtataccta
    11221 tggaactcgt gattatggaa catataaatt agaaggtttc tggagaaatg gattgtcccc
    11281 tacaggcttt atgaagcgaa taacagatag tgagacttct attgattatt ttaataaaca
    11341 aggtgagttg gttaagaatt tttccagagg cgaggcaata agaacatggt ctcttattag
    11401 aaagcttaga aaaattgata tgcatcttta tcagatggac gacgtagata tcttgccgta
    11461 ttgtgagatg gagaataaaa gtggtttaaa gagacagggt gagattaaat tctccactgg
    11521 gaaattgaac ggtttaggga gtgagtacta ttctagtggt gataaatacc atggtcagtt
    11581 caaagatggt tatcaacatg gggtaggaac atattatttt gtaaatggtg atatttacca
    11641 tggaggcttt aaagatagta agttccacgg aaaaggtctg atgatatggt cgaatggaga
    11701 tgtttatgag ggagacttta ttgaaggaaa acgtacagga aatggaattc tccagaaggg
    11761 agatgggaat atttatgttg gtgatttcat agatgggaaa tctactggat atggatggga
    11821 attctttaaa gatggtcgga tatatgttgg tccatatggt gacataaaag atggggaggc
    11881 gactatatat tttgaaaacg gaaccattat tgtatttgaa tggaatgagg gaaaacaaag
    11941 cgagcaattt cgcaagttgt tgccaagtgg agaaataatc ttcggaacat tacacaatgg
    12001 aaaggatagt aacgagaagc aggcagagga tagtaatgtt aaacaatttg tatctcatag
    12061 gatcatttcc aaaaaagata atcaaaaata tgcaggatta aatagaaatg atatttgttc
    12121 atgtggctca gggaaaatgt ataaaaactg
//
LOCUS       DBNFCX010000068        12135 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.068, whole genome shotgun sequence.
ACCESSION   DBNFCX010000068 DBNFCX010000000
VERSION     DBNFCX010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 12135)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12135)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12135
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.068"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(43..1395)
                     /locus_tag="AC1PJC_001626"
     CDS             complement(43..1395)
                     /locus_tag="AC1PJC_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015057717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HIP6620608.1"
                     /translation="MQTSILHQDRKKIKVAAYCRVSTDQEEQLSSYENQVNYYREFIS
                     KHEDYELVDIYADEGISATNTKKRDAFNRLIQDCRAGKVDRILVKSISRFARNTLDCI
                     KYVRELKELGVGVSFEKENIDSLDSKGEVLLTILSSLAQDESRSISENATWGIRKKFE
                     RGEVRVNTTKFMGYDKDENGKLIVNPQQAETVKYIYEKFLEGYSPESIAKYLNDNEIP
                     GWTGKANWYPSAIQKMLQNEKYKGDALLQKTFTVDFLTKKRIANDGQVNQYYVENSHE
                     AIIDKDTWELVQLELARRKAYREEHQLKSYIMQNDDNPFTTKVFCKECGSAFGRKNWT
                     TSRGKRKVWQCNNRYRVKGQIGCQNNHIDEETLEKAVVMAVELLSENVDLLHGKWNKI
                     LEENRPLEKHYSTKLAEVINKPSWEFDSYEMCQVLDSITISEDGQISVKFLEGTEVDL
                     "
     gene            complement(1298..2539)
                     /locus_tag="AC1PJC_001627"
     CDS             complement(1298..2539)
                     /locus_tag="AC1PJC_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HIP6620609.1"
                     /translation="MSVKKIRVNKQKHKQRICAYIRVSTTNGSQLESLENQKQYFENL
                     YSNRDDIDFVGVYHDRGISGSKDNRPNFQAMIEDCRKGMIDIIHTKSIARFARNTVTV
                     LEISRELKAIGVDIFFEEQNIHTLSSEGEVMLSVLASIAEDELRSMSGNQRWAFQKKF
                     QRGELVINTKRFLGYDIDENGELIINPEEALIVRQIFALYLEGYGTHRIAKLLNEKGV
                     ATVTGAKWHDTTIRQILSNEKYNGSVLLQKYFHDGVNGPKKLNQGELEQYFIEDNHEA
                     IISMENWQTVQDKLNSRRWQQGRNKTYKFTGLLKCQHCESTLKRQVSYKKKIVWCCSK
                     YIKEGKAACKGMRVPEVDISNWTVTSPVTVIERDRDGEKYYSYSSQESADQYSSSGQE
                     ENQSSRILSSVHRPRRTAIKL"
     gene            complement(2763..4232)
                     /locus_tag="AC1PJC_001628"
     CDS             complement(2763..4232)
                     /locus_tag="AC1PJC_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000515884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HIP6620610.1"
                     /translation="MGKHLVICGHGQGRTGYDPGAVNAKLGITEAGKVRELAKLMSKY
                     SGQQIDFITEQNVYDYRSITSIGKGYDSITELHFNAFNGSAKGTEVLIQSSLEADKED
                     MAILSLLSRYFQNRGIKKVDWLYNANQAASRGYTYRLVEIAFIDNELDMAIFEKKKED
                     IARGLVSAITGVEVKTIVPSTPSSTAGNSGTPSKPIYLVGDSLRVLPHATHYQTGQKI
                     ANWVKGRTYKILQVKNVHQSNSKRAYLLDGIKSWMLEQDVEGTTKGHSEQTYQAQKGD
                     TYYGIARKFGLTVDALLAINGLKKTDILRVGQTLKVNAASRTTTAIPTSVASRVVASA
                     LSKVGQKVTVPSNPYGGQCVALVDKIVQELTDKNMSYTNAIDCLKKAKSNGFQVIYDA
                     WGVNPKAGDFYVIQTDGLVYGHIGVCVTDSDGKSIDGVEQNIDGYSDHNKNGINDQLE
                     IGGGGITRRVKRQWMADGSLYDSTGTVKLGKVVGWFRIS"
     gene            complement(4239..4634)
                     /locus_tag="AC1PJC_001629"
     CDS             complement(4239..4634)
                     /locus_tag="AC1PJC_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HIP6620611.1"
                     /translation="MKELLTLNKILFSMIGGLIGSLFGELDGILYALLVFIIIDYLTG
                     IFAAVVEKQLSSSIGFRGIFKKIAILFLVSIGHLIDTAIIKQGGTIRTMVIFFYLSNE
                     GLSILENTVRIGLPIPEKLQAILKQINER"
     gene            complement(4612..4980)
                     /locus_tag="AC1PJC_001630"
     CDS             complement(4612..4980)
                     /locus_tag="AC1PJC_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620612.1"
                     /translation="MALLNIDKVTEPFDLETALSYMRKNGEFIRCKTAEQDFYMYLEE
                     VRRPAIKNGKRQLVTTETVWAFNQWGSTTLTLNLSDLFHECFYLMRFDENGQPDWSDP
                     TIVQEGSVESEVTDEGTVNS"
     gene            complement(4986..5192)
                     /locus_tag="AC1PJC_001631"
     CDS             complement(4986..5192)
                     /locus_tag="AC1PJC_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620613.1"
                     /translation="MNLEQINQSLKLTIQELVTKLSDEITAKNLIAIQLVEKDEELSL
                     LRKEKQELTELLEVQTKPEEEKGE"
     gene            complement(5205..9686)
                     /locus_tag="AC1PJC_001632"
     CDS             complement(5205..9686)
                     /locus_tag="AC1PJC_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016032 - viral process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail spike protein"
                     /protein_id="HIP6620614.1"
                     /translation="MLSLLDKTVRTAKWHGKPLPETIKASVKETLNGDFVLTFTYPIT
                     DSGLYRELKEDYLVRSPVPVLGHQLFRIKKVIEGDTSLEVVAYHISDDIMTRLVSPFR
                     CEQVPCATALSSMVMASKSPLGDFSFTSDIVKNRTYTTDKEQTLYSSLLDGKHSIIGT
                     WEGELVRDNLALTIKSERGQDRGVVISTHYNLKKYQRTKESSQIITRIHATSRFKQEG
                     QDRETELQVTVDSPLINSYPFINEVTYTNNNLRSRQELIEWASSKFRLEGIDKPKDAI
                     IIEAFELDGQTVHLGDTVTLKSKLHGIDVRKKAIAYDYDPLAKNYRSITFDDKASIVT
                     GKTGGSLTNLANNLLDGNRRSEDVAVEIALENANRAFDAEFEKRQVAIDTAIEQAQSR
                     GEVYADRLKASIDSELSTIHQQMRQQEEEQKRTTRDLLAKAGVNTNLATEAKQKAEQA
                     QTGATEALRRVEQAKLDAIQEANRLTSTERSQTETKIAIAKSQAISEASRLVDVAKSL
                     LGGQLATVSTNLSQTKEDIKLLASKQLVDSLTGRVTGAESMIQVQADQISQRVKTSDF
                     NQAKQRIETAESSITQLGNRITTEIRETIAKIPVDLGGRNYILKSDTYITSGSKFLDS
                     ASDFIDYAQAGKFVTISVDIKGENLSPDERGQSRIGCELRLTLSNGNPLYLNCYKVVS
                     ATQPRERIYRTVRIPDGVSVVSVAKLNLFVQVRGNALAGRPKFELSSMPTDWSPAPED
                     LITDLSQTRTLITQTAEGQTQLSTKVTHTENKMMNAETQIRQLLGDVASKVSKMDFDN
                     LKSTVENHTTSINQTSQSILLKADKTFVDGVKSTAETALSKATSNATMISQTKSELTI
                     ANNAISQKVAKTDFNSLTSRVTSAESTIRTQAGQIEQRLTSTQVESAINSKGYQTKSQ
                     VDSNITGRGYLTSSSLQPYATTTSVQNLVRTTSDSFTQRISQTESRIPTSVSHRNLIA
                     GTSDRWSAYQTINANSNWIASLGRVQFGDSSGIYVGSKVHLYVHVSADEVTFDPAVTT
                     RTMKLQGPILDSQNVWTWTNWNLYHPFYNKWSSNLTTGNNYRLIKLTSTVTQEMYQHS
                     KGFELQVRIDGVKTGKFHVRALMFSTGDIFPDYWTPSLEDFTTVTAFHEVRDTVSSHT
                     RTIGDHTNQISQVVQTATGIVTRVGNLETSRATTAAVNAIQTQVSTLAGSWSVRNLTS
                     AGTVLSQLNLNKDGTIKIDGKLVQITGTTYIQDGVIASGKIASLDAGKITTGIISAAR
                     IGAEAITADKLKVDQAFFTKFMATEAYLNQLFAKSAFITQVQSVTLSANKISGGILSA
                     INGAMKINLSLGNIKFFTNSPSISREVSGYPHQWVSFETGTSNGKPCGVTIIGSNRWN
                     NWNANDGGFVGIRAWNGTDTDQIDVVGDKVRLASAPYTNPDGWEIVTLPNRLSIDAYK
                     ASDRPSSILNIGDIRIYRNSTTYVSLKDVLHQFNHNFKHLVNITGRGDVILTWDTIK"
     gene            complement(9686..10408)
                     /locus_tag="AC1PJC_001633"
     CDS             complement(9686..10408)
                     /locus_tag="AC1PJC_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HIP6620615.1"
                     /translation="MIRHNALTIGGVSTASFPFKVIVEDSPSITVSESKTQLIEHQGL
                     SGAVLQTNPRRSVMELSYTLYLVKPSEEQLFSFLKLFLKEGFWLENASFKTIRFWCYK
                     VQHTPVQKDKMGVYELKVIFSCHPTKWFKTTTSQVFRTSGTLRSQGSAIAFPKITISG
                     NSSSETSFTIGDDVIRLERLQETLIMDNNPSQPSFKTQRGQPVKWSGDFISIDAGRND
                     SVGVVLGAGITSLTIETNWGWA"
     gene            complement(10405..>12135)
                     /locus_tag="AC1PJC_001634"
     CDS             complement(10405..>12135)
                     /locus_tag="AC1PJC_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015445172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HIP6620616.1"
                     /translation="QSFLKGNYENDAALGISATETTRNAAANKLYGKSFNELSEAQKQ
                     LTLLQMVEDGNELSGALGQAARESDGLENVLGNLRQSGTNALAAIGQPILEMLIPVFQ
                     SLADIVSQLATWFTNLSSPIKEVVIIFTGILAVVGMLLPVFLGLQVAAAAMGTTVVGM
                     ITAFLPIVGIIVGIVAAITLLIVGLKELWTNHEGFRTVVTEIWNSIYAFLSMIIQQIS
                     SFVMSVWGTLTTWWTENQQLILNAATTVWNAITTVIQTVLTILGPLIQASWENIKLII
                     TAAWEMIKIVVETAINVVLGIIKAVMQVITGDWTGAWETIKQVLSMAWEGIKSLISLA
                     LNFITQYISTAWTGIKNTISNLLTAISSVVSSIWSTIQSTISNILSNIGVTVSNIWNG
                     IRNTVSSVLNGISSTVSSVWNGVKNTISNAINGARDAVSNAINAIKNLFNFQIRWPHI
                     PLPHFRVSGSANPLDWLKGGIPRISIDWYAKGGILTKPTAFGMNGNSLMVGGEAGKEA
                     VLPLNEQTLGAIGRGIAKTMTSNLPTIHITITGNTVREETDLHRLAEMVGEKLVYELE
                     RQQGLRGVKP"
BASE COUNT         3275 a         2771 c         2237 g         3852 t
ORIGIN      
        1 cacgaaacaa caaaaaaact gcaacctttc ggccacagtc acttacaaat ctacctcagt
       61 cccctctaag aattttacac ttatctgccc atcttctgaa attgtaatac tgtccaatac
      121 ctgacacatc tcatacgaat cgaattccca ggatggcttg tttatcactt cagccaactt
      181 tgtactataa tgcttttcta gcggacgatt ttcttctaga atcttattcc acttcccatg
      241 caacagatcc acgttctcac tcaatagttc tacagccatt actacggctt tctctaacgt
      301 ttcttcatca atatggttat tctgacagcc aatctgtcct ttgaccctat atcgattgtt
      361 acattgccaa accttgcgtt tacctcgact ggtggtccag ttctttcgac caaaggctga
      421 accacattct ttacagaaca ccttagttgt aaaagggtta tcgtcatttt gcatgatata
      481 ggacttgagc tgatgctcct ctcggtaggc tttcctcctt gccaattcca actgtactaa
      541 ttcccaagtg tctttgtcaa taatagcttc atggctattt tctacatagt attggttaac
      601 ttgaccatca ttggcaatcc gtttcttagt caaaaaatca actgtaaaag tcttttgtaa
      661 taaggcatca cccttatact tttcattttg aagcattttc tgtattgcgc ttggatacca
      721 atttgccttt cccgtccaac caggtatttc attgtcattc aaatacttag caatggattc
      781 aggactatag ccctctaaga atttctcgta tatgtatttt acagtttcag cttgctgagg
      841 gttaacgata agcttaccat tttcatcctt atcgtaaccc atgaacttag tagtattcac
      901 gcgcacctca ccacgttcaa acttcttacg aattccccac gtcgcattct ctgaaatgga
      961 acgtgactca tcctgggcta aggaagaaag aattgtcaga agaacttcac ctttggaatc
     1021 aaggctgtca atattctcct tttcaaaaga cacaccaaca cccagttctt tcagctctcg
     1081 gacgtatttg atacaatcaa gggtgtttct ggcaaatcga ctaattgact tgaccaaaat
     1141 cctatccacc ttacctgccc tacaatcttg tatcaagcgg ttaaaagcat cacgtttttt
     1201 tgtattggtt gctgagatgc cctcatccgc atagatgtca actaactcat agtcctcgtg
     1261 tttagagata aactctcggt aataattaac ttggttttca taacttgata gctgttcttc
     1321 ttggtcggtg gacactcgac aatatgcggc tactttgatt ttcttcctgt cctgatgaag
     1381 aatactggtc tgcactttct tggctggaat aactgtaata cttttcccca tctctatccc
     1441 tttctattac tgttactggc gaggttactg tccaatttga gatatctact tctggcacac
     1501 gcatcccctt acaagctgct tttccctctt ttatgtattt ggaacagcac caaacaattt
     1561 ttttcttgta agaaacttgt ctctttaaag tcgattcaca atgctgacac tttaataacc
     1621 ccgtaaattt ataggttttg tttctacctt gttgccatct tctactgttt agtttgtcct
     1681 ggactgtttg ccaattctcc atggaaataa tagcttcatg attatcctct ataaagtatt
     1741 gttcgagttc accctgattc aattttttag gaccattcac accatcgtga aaatacttct
     1801 gcaataagac cgaaccattg tatttttcat tgcttaatat ttgacggatt gtggtgtcat
     1861 gccatttagc acctgtaacc gtcgcaacgc ccttttcatt taacagtttg gcaatacgat
     1921 gagtaccata cccttcaagg taaagtgcaa atatttgcct gactatcaaa gcttcttctg
     1981 gattgataat caactcacca ttctcgtcta tatcatatcc taggaatcgc ttggtgttaa
     2041 tgactagctc tcctcgttgg aacttctttt gaaatgccca acgttgattg ccactcatac
     2101 tcctcaactc gtcctcagca atactcgcta atactgaaag catcacttcc ccttcacttg
     2161 aaagggtatg aatgttttgt tcctcaaaga atatgtctac tcctattgcc ttcagttcac
     2221 gactaatttc aagaactgta accgtgtttc tagcaaatcg agcaattgac ttggtatgaa
     2281 taatatcaat cataccttta cgacaatctt caatcatggc ttgaaaattt ggacgattat
     2341 ccttagaacc agatatacct ctgtcatgat aaacacctac aaaatcaata tcgtctctat
     2401 tggaatacag gttttcaaaa tactgtttct gattttctaa cgattctaac tgacttccat
     2461 tagtcgtcga aactcgaatg taggcacaga tcctctgctt gtgtttttgt ttattgactc
     2521 taatcttttt tacggacatt tactctcctt cctatgtaat ggcacactat atatcactct
     2581 aaagggaaaa ttagtcaagt tatcagacaa actaattcga cctgataaat ttatgccata
     2641 ggtcatggaa tacaaatatt cctcctacct tactaggtag gtttgggagt aatttttccg
     2701 cacttattga aaaaaaagac aaaaaaataa agcctgatgt ttccaccagg cttatatctt
     2761 aattatgaaa ttctaaacca acctacaact ttaccgagtt taactgttcc agttgaatcg
     2821 tagagtgagc catccgccat ccattgacgt tttacacgac gagtgatacc accgccacct
     2881 atttccaatt ggtcattgat accgttctta ttatggtcag aatatccatc aatattctgt
     2941 tccacgccat caatactttt tccatctgaa tccgtcacac agacaccaat gtgaccatat
     3001 accaaaccat ccgtctgaat gacataaaaa tcacctgctt taggattcac accccaagca
     3061 tcgtagatta cttgaaaacc attcgatttt gctttcttca aacaatcaat ggcattagta
     3121 taggacatat tcttatccgt aagttcttga acaatcttat ccaccaaggc aacacactgt
     3181 ccaccataag ggttagatgg aacagtcacc ttttgaccga ccttggataa tgctgacgca
     3241 accacacgac tggcaacact ggttggaata gcggttgttg tccttgaagc cgcattgacc
     3301 tttagagttt gtccaactct taaaatatcc gtcttcttca agccattaat cgcaagaaga
     3361 gcatcaactg ttaaaccaaa cttccgagcg attccataat acgtatcgcc tttctgtgct
     3421 tgataggtct gctcactatg gcctttagtt gttccttcta catcctgctc aagcatccat
     3481 gacttgattc catcaagtag atatgctctc ttactgttgg actggtgaac attcttcact
     3541 tggaggattt tgtaggtgcg tcccttgacc cagttggcga ttttctgacc agtctgataa
     3601 tgagtcgcat gaggcaacac cctaagacta tcaccaacaa gatagattgg ttttgaagga
     3661 gttcctgaat tcccagcggt tgaactgggg gtcgagggaa ctatggtctt gacttcaact
     3721 cctgttatgg ctgatacaag acctctcgca atgtcctctt tcttcttttc aaaaatcgcc
     3781 atatctagtt cattatcaat gaaggcaatt tccaccaaac gataggtgta tccacgactt
     3841 gctgcttggt tggcattata gagccaatct accttcttaa tgccacgatt ttgaaagtat
     3901 cgtgaaagga gagataggat agccatatct tccttgtctg cttctaaaga agattgaatc
     3961 aggacttctg tacctttggc actaccatta aaggcattga agtgcaattc agtaattgag
     4021 tcgtatccct taccaatact agtaatactc cgataatcat aaacattttg ttcggtaata
     4081 aaatcaatct gttgtccact gtacttagac attaacttgg ctaattctcg aacctttcct
     4141 gcttctgtga tgcctagttt ggcattcact gctccaggat catagcctgt tcgcccctgt
     4201 ccatgaccac aaatgactag atgttttccc atatcttatc acctctcgtt gatttgtttt
     4261 aagattgctt gtagtttctc aggtattggt agaccaattc gaacggtatt ttctagaatg
     4321 cttaacccct cattactgag ataaaagaat ataaccatgg ttcgaattgt tccaccctgc
     4381 ttgataatag ctgtatcaat cagatgacca atagaaacta aaaataaaat ggctatcttt
     4441 ttaaagatgc cacgaaaacc aatactacta gacaattgtt tctctacaac cgccgcaaaa
     4501 attcctgtta gatagtcaat aataatgaag acaagtaggg catatagaat accatccaac
     4561 tctccaaata gactaccaat caagcctcca atcatggaaa ataaaatctt attaagagtt
     4621 aacagttcct tcatcggtca cctcgctttc tactgaacct tcctgtacaa tggtagggtc
     4681 tgaccaatcc ggttgaccgt tctcatcaaa ccgcatcaga taaaaacatt catggaataa
     4741 atcagaaagg ttcagagtta atgtcgtact accccactga ttaaatgccc aaactgtttc
     4801 tgttgtaact aactgccgct ttccattttt aatggcaggt cgccttactt cttcaagata
     4861 catataaaaa tcctgctctg cggtcttaca acgtatgaac tctccattct tacgcatgta
     4921 agatagggct gtctccaaat caaatggttc tgttactttg tcaatattga gtagtgccat
     4981 agcaactatt ctcctttctc ttcttcaggt tttgtctgaa cttccaataa ctcagtcaat
     5041 tcctgttttt ctttacgcaa taggctaagt tcctcatcct tttccaccaa ttggatggca
     5101 atgaggttct tagcggtaat ttcatcagag agctttgtga caagctcctg aatagttagt
     5161 tttaatgatt ggttgatttg ttctagattc atctgtgaac tcctttattt aatcgtatcc
     5221 catgtcaaga tgacgtcacc tcgaccagtg atgtttacta agtgtttaaa attgtgattg
     5281 aattgatgaa gtacgtcctt caagctgaca taggttgtac tgtttcgata gatgcggata
     5341 tctccgatat tcaatattga acttggtcgg tcagaagctt tataggcatc aatactcagt
     5401 cggttaggca acgttactat ttcccagcca tctggattgg tatagggagc actagctaaa
     5461 cgtaccttat cacctaccac atcaatttgg tcggtatctg taccgttcca tgctcgaatt
     5521 cctacaaagc caccgtcatt agcattccag ttgttccatc gattggaacc gataatggtt
     5581 acaccacatg gcttaccgtt tgacgtacct gtttcaaatg aaacccactg gtgaggataa
     5641 ccactaacct cacgagaaat ggatggagag tttgtaaaga acttgatatt tccaagtgac
     5701 agattgattt tcatggctcc gttgattgcg gacaagattc caccagaaat tttgttggca
     5761 gatagggtta ctgactgcac ttgggttata aaggctgatt tggcaaacaa ctgattgaga
     5821 taggcttctg tagccataaa cttggtaaag aatgcttggt caacctttaa cttatccgca
     5881 gtgattgctt ctgctccaat tcgagctgct gagatgatac ctgtcgtaat cttgcctgca
     5941 tcaagactgg caatcttacc gctcgcaatc actccatctt ggatataggt tgtgcctgtt
     6001 atttgaacga gttttccatc aattttgatt gtcccatcct tattgagatt aagttgactt
     6061 aatactgttc ctgcactggt cagatttcga accgaccacg accctgcaag agttgaaact
     6121 tgagtttgaa tggcattgac ggcagccgtt gtcgctcgac ttgtttctag attgccaact
     6181 cgtgtcacaa tcccagtagc cgtttgaaca acctgactga tttgattggt gtgatctcca
     6241 attgttcgag tgtgactgct tacagtatcc cgcacttcat gaaatgcggt tacagtcgta
     6301 aagtcttcta acgatggtgt ccaatagtct ggaaagatat caccagttga aaacattaag
     6361 gctctcacat ggaacttacc agttttaact ccatcgattc ttacttgaag ttcaaatcct
     6421 ttagagtgtt ggtacatctc ttgagtgacg gtagaggtta gtttgattaa ccgataattg
     6481 ttaccagttg tcagattgct gctccattta ttgtagaaag ggtgatacaa attccagttg
     6541 gtccatgtcc aaacattttg actatccaat attggacctt gaagtttcat agtacgagtc
     6601 gttacagcag ggtcaaaggt aacttcatcc gctgagacat gaacatataa atgaactttt
     6661 gacccaacat aaattccact actatcccca aattgcactc ttcctaatga tgctatccag
     6721 ttactattgg catttatcgt ctgataagca ctccatctat ccgaagtacc agctatcaag
     6781 ttgcgatgcg aaactgaggt agggattcta ctttccgttt gactgattcg ctgggtaaaa
     6841 ctatcagagg tggttctaac caaattctgc acactagttg tcgtcgcata gggttggaga
     6901 gaactgctgg ttagatagcc acgaccagta atattggaat ctacctgtga cttggtttgg
     6961 taaccttttg agttaatggc tgattcaact tgtgtacttg ttagtcgttg ttcaatttgc
     7021 ccagcctgtg tacgtatagt ggattctgca cttgttactc gactagtcaa gctattaaaa
     7081 tcagtctttg cgactttctg tgagatggca ttattggcaa tagtcagctc agacttggtc
     7141 tgactaatca ttgtcgcatt gctagttgct tttgaaaggg cggtttctgc cgtagatttc
     7201 acaccgtcca caaaggtctt gtcagcttta agtaaaatgg actgggacgt ttgattaata
     7261 cttgtcgtat gattctcaac tgtactcttg agattgtcaa agtccatttt tgaaacttta
     7321 ctagccacat cacccaacaa ttgcctgatt tgggtctcag cattcatcat tttattctca
     7381 gtatgagtaa cctttgtaga cagttgagtt tgtccctcag ctgtctgagt aattagcgtt
     7441 ctggtttgac tgagatctgt gattaaatcc tcaggagcag gtgaccagtc tgtaggcata
     7501 gaagaaagtt caaactttgg tcttccagct aaggcatttc ctctgacttg cacaaaaaga
     7561 ttgagctttg ctacactaac aaccgataca ccatcaggaa tacgaaccgt tcggtatatt
     7621 cgctcgcgag gttgggttgc tgaaacaact ttatagcagt ttagatagag aggattgcca
     7681 ttggataaag tcaagcgtag ctcgcatcct atcctagact gtcctctttc atcaggcgac
     7741 agattttccc ccttgatatc aacgctgatc gtcacaaact tccctgcctg agcatagtcg
     7801 ataaagtccg aagcactatc tagaaactta ctcccagaag taatataagt atcacttttt
     7861 aatatgtaat ttcgaccacc taaatcaact ggaatcttag ctatggtctc tcgaatctca
     7921 gtcgttatcc gattccccaa ttgagtaata gacgactcgg cagtttcgat tctctgtttc
     7981 gcttggttaa aatcactggt tttaacacgc tgagaaattt ggtctgcttg tacttgaatc
     8041 atggactctg caccggttac tcgaccagtc agactatcca ccagttgctt actcgcaagg
     8101 agctttatat cctccttggt ttgtgacaga ttggtactga cagtagccaa ctgtccaccc
     8161 aacagtgatt ttgctacatc taccaatcga ctagcttcag agatagcttg tgattttgct
     8221 atcgcaatct ttgtctcagt ctgactacgt tctgttgaag tcaatcggtt agcttcttga
     8281 atggcatcaa gcttagcttg ttctactctc ctgagggctt cagtcgcccc agtttgagcc
     8341 tgttctgctt tttgtttggc ttctgtagct aagttggtgt ttaccccagc ctttgccaat
     8401 aaatcacgag ttgtgcgttt ctgctcctct tcctgttgtc gcatctgttg gtgaatagtt
     8461 gaaagttcac tgtcaatgct ggcctttaat cgatccgcat agacctcccc acgactttga
     8521 gcctgttcta tagcggtatc gatggctact tgacgtttct caaattccgc atcaaaggct
     8581 ctgttggcat tctcaagggc aatttcaacg gcaacatcct cactccgcct attcccatca
     8641 aggagattat ttgctaggtt agtcaagcta ccgccagttt tacctgtaac gatacttgcc
     8701 ttatcatcaa aagtgataga gcggtaattc ttagctaaag gatcataatc ataagcgatg
     8761 gctttcttcc tcacatcaat tccgtgtagc ttgcttttta aagttactgt atcgcctaga
     8821 tgaactgttt gaccgtctaa ctcaaatgcc tcaatgatga tggcatcttt tggtttatca
     8881 attccctcta agcgaaactt gctactagcc cactctatta actcttgacg agatctgagg
     8941 ttattattgg tataggtcac ctcattgatg aaaggatagg agtttatcag tggactgtct
     9001 actgtgactt gaagttcagt ttccctatcc tgcccctctt gtttaaacct tgaagtggca
     9061 tggattcgag tgataatctg tgaactttct tttgttctct gatacttttt caaattgtag
     9121 tgagtagaga tgactacccc acggtcttgt cctcgctcac tctttatagt tagggcaaga
     9181 ttatcacgaa ccagttcccc ctcccaagtt ccaataatag aatgtttgcc atccaacagg
     9241 ctggagtata gcgtctgttc cttatctgtt gtataggttc tgttcttgac aatgtcgctg
     9301 gtaaaagaaa aatctcccaa tggagacttg cttgccatga ccatgcttga tagtgctgtt
     9361 gcacagggta cctgttcaca cctaaatggc gataccaacc ttgtcatgat gtcatctgat
     9421 atgtgatagg ccacaacttc aagactggtg tctccttcaa tgactttctt tatccgaaac
     9481 aattggtgtc ccaatactgg aactggactt cgaaccaaat aatcctcttt aagctcacga
     9541 tacaaaccac tatccgtaat tggataggta aaggtcaaaa caaaatcccc attcaaggtt
     9601 tctttgacac ttgccttaat ggtttctggg agtggtttcc catgccattt tgccgttcga
     9661 acagttttgt ctaataatga tagcactatg cccaccccca attcgtttct attgttaatg
     9721 atgtgatgcc agcacctaag acaactccaa ctgagtcatt tctacctgca tcaatggaga
     9781 taaaatcacc tgaccatttt acaggctgac ctctttgtgt cttaaaactt ggctgactag
     9841 gattattatc cataatgagt gtttcttgta atcgctccaa gcggatgaca tcatccccaa
     9901 tcgtaaagct agtttcacta cttgagttgc cgcttatggt aatctttgga aaagcaatgg
     9961 ctgaaccttg acttctcaaa gtaccactag tcctaaacac ctgcgaggtc gtcgttttga
    10021 accacttagt tgggtgacaa gaaaaaataa ccttaagctc atacacaccc atcttatcct
    10081 tttgaactgg agtatgctga accttgtaac accaaaagcg tatggtcttg aaactagcgt
    10141 tctcaagcca aaatccttct ttcagaaata gcttcaaaaa ggaaaataac tgttcttcac
    10201 taggttttac aagataaagg gtgtagctca gttccatgac acttctgcga ggattggttt
    10261 gaagaaccgc tcctgacagg ccttggtgtt ctatcaattg cgtcttactt tcacttactg
    10321 tgattgaagg actatcttcc acgattacct taaaaggaaa actagccgtg gacactccac
    10381 caatggttaa tgcattatgt ctaatcatgg tttcactcct ctcaatcctt gctgacgttc
    10441 taattcatat actagtttct ctccaaccat ctccgctagt cgatgaaggt cagtctcttc
    10501 tcttactgtg ttacctgtaa tagtgatgtg aatggtcggt agattgcttg tcatggtctt
    10561 tgcgattcct cgaccaattg cacctaacgt ttgttcattc aaaggcaaga ctgcttcttt
    10621 tcctgcttca ccaccaacca ttaggctatt gccattcatt ccaaatgcag tgggcttggt
    10681 tagaatacca cccttggcat accaatcaat ggaaattcta ggaattccac ccttcaacca
    10741 atcaagagga ttggcagacc cagacaccct aaagtgaggg agggggatat gcggccagcg
    10801 aatttggaag ttaaagagat ttttaatggc attgatagcg ttactcacgg catctcttgc
    10861 cccattgatg gcattggaaa tggtattctt gacaccattc caaacggatg ataccgtgct
    10921 tgaaatgcca ttcaagacac tagagaccgt gtttcggata ccgttccaaa tattggatac
    10981 cgtgactcca atattggata agatattaga tatggtcgat tggattgttg accaaataga
    11041 tgaaacgact gaactgatag ctgtcagtaa atttgagatg gtattcttga tacctgtcca
    11101 agcagttgag atgtactggg tgatgaaatt gagggctaag gaaataaggg acttgatgcc
    11161 ctcccatgcc attgataaga cctgtttgat ggtttcccaa gcaccagtcc aatcaccagt
    11221 gataacctgc atgactgcct tgatgatacc aagtaccaca ttgatagcag tctcgaccac
    11281 aatctttatc atctcccaag cggctgtgat gatgagtttg atattctccc aacttgcttg
    11341 gatgagcggt ccaagaatag tcaacaccgt ttgaataacc gtagtgatgg cattccatac
    11401 cgtggttgca gcatttagaa tcaattgctg gttttcagtc caccatgtgg ttagcgttcc
    11461 ccagacggac ataacaaaac tagaaatctg ctggatgatc atggacagaa aggcatagat
    11521 actattccag atttccgtca caaccgttcg aaagccttcg tgattcgtcc agagttcttt
    11581 taacccaaca atcagcaagg taatggcagc tacaatacca acaataatcc ccacaatcgg
    11641 caaaaatgcc gttatcattc caacaacggt tgtccccata gcggctgccg caacctgtaa
    11701 gcccaagaaa accggaagta acatccctac tacggctaaa atacctgtga agataatgac
    11761 gacttccttg atgggactgg ataagttggt aaaccaagtc gctagttgac taacaatgtc
    11821 tgccaaactt tgaaagactg gaataagcat ctccagaatc ggttgaccga ttgctgctag
    11881 tgcattagtt ccagactgtc ttaagttacc cagaacgttt tccagtccat ctgattccct
    11941 tgcagcttgt cccaaggctc cagagagttc attgccgtcc tctaccattt gaaggagggt
    12001 taactgcttc tgagcttctg acagttcatt gaaggacttt ccatagagct tgttcgccgc
    12061 tgcattacga gtggtttctg tcgcagaaat acctagagct gcgtcatttt catagtttcc
    12121 tttgaggaag gactg
//
LOCUS       DBNFCX010000069        12110 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.069, whole genome shotgun sequence.
ACCESSION   DBNFCX010000069 DBNFCX010000000
VERSION     DBNFCX010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 12110)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12110)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12110
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.069"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(22..417)
                     /locus_tag="AC1PJC_001635"
     CDS             complement(22..417)
                     /locus_tag="AC1PJC_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1398 domain-containing protein"
                     /protein_id="HIP6620617.1"
                     /translation="MFTLENINHGHEQFTGPDFPKLIAYFKDLGMVENIVDIQSGQVV
                     YRSKADQTLEKQGYQVTIPVADQVNLDQFVTILRNHQAGQTDFPTFCQETAEAGIYKW
                     VIDLEAMTCSYLDKAEQAVFVETIPSVEN"
     gene            complement(768..1472)
                     /locus_tag="AC1PJC_001636"
     CDS             complement(768..1472)
                     /locus_tag="AC1PJC_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="B3/B4 domain-containing protein"
                     /protein_id="HIP6620618.1"
                     /translation="MSQFVVDSSFWSLFPDAKIGVLLLKDYKTPAQSPDELVKLLEES
                     NGIAQKFLTEDTFSENEVIRTYRQAYQKFKTKKGARSSIEALLKRSTSDRPVTTISPL
                     VDIYNAASLRFGLPCGAEDLDTFVGNLQLTVTEGGDEFYLIGDENNNPTLPGEVCYKD
                     DKGAVCRCFNWRDGERTMITDETKNAFLVMELVNSDRVEDLENALDFISQQAEKFLGV
                     VPEKYLLDCDRPAIAL"
     gene            complement(1654..2346)
                     /locus_tag="AC1PJC_001637"
     CDS             complement(1654..2346)
                     /locus_tag="AC1PJC_001637"
                     /EC_number="7.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000574038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033232 - ABC-type D-methionine
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0048473 - D-methionine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter permease"
                     /protein_id="HIP6620619.1"
                     /translation="MLEWIQTNFPDIYKLGWDGQTGWLTHFNLTLYMTFVSFAFGGLM
                     GLVSGLFLVLTGPRGVIENKTVYWILDKVASIFRAIPFIILLAAIAPLTKIIVGKTIG
                     TEAALVPLALSVFPFFARQVEVVLSELDRGVIEAAQASGATFWDIVLVYLREGLPDLI
                     RVTTFALVSLVGYTAMAGAIGAGGLGQVALSYGYLRYNNDVTFLATLLILVIIFVIQF
                     IGDFLTRKISHR"
     gene            complement(2347..3411)
                     /locus_tag="AC1PJC_001638"
     CDS             complement(2347..3411)
                     /locus_tag="AC1PJC_001638"
                     /EC_number="7.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0033232 - ABC-type D-methionine
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0048473 - D-methionine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HIP6620620.1"
                     /translation="MSKEMIKLDNIDVTFQQKKRTIEAVKDVTIHINQGDIYGIVGYS
                     GAGKSTLVRVINLLQVPTAGKITIDEDVIYEGEKVTLTPAQLRSKRREIGMIFQHFNL
                     MAQMTAEENVAFALKHSGLSKEEKKEKVAKLLDLVGLSDRAENYPAQLSGGQKQRVAI
                     ARALANDPKILISDESTSALDPKTTKQILALLQELNEKLGLTIVMITHEMQIVKDICN
                     RVAVMQDGRLIEEGSVLEIFSHPKEELTQDFIKTATGIDEALVKIYQQDIVKNLPENS
                     ILVQLKYAGSNTDTAIVNDLYKFYQVSANILYGNIEILDHTPVGEMVVILSGESGQLH
                     RAIEAVTEARVEVTILKGAN"
     gene            complement(3404..4771)
                     /locus_tag="AC1PJC_001639"
     CDS             complement(3404..4771)
                     /locus_tag="AC1PJC_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HIP6620621.1"
                     /translation="MADSKVQAFENDAIIQTYFEKLKVLISKKSIFAQQIGLLDVATY
                     LKEMFEEAGADVILDDSYAAPFVMARFEASVPDAKTLIFYNHYDTVPADADQVWEKGN
                     PFELTISEGYIYGRGVDDDKGHITARLSALKKYQARQNGDLPVNVIFIMEGAEESASV
                     DLDKYLSKYKEHLIGADLLVWEQGHRNSLHQLEIAGGNKGIVTFDLQVKSADLDIHSS
                     YGGVIDSASWYLLSALQSMRAADGQILVDGIYEQVQEPNERELALVEEFALATSQSMT
                     DIYGLTLPTLVEDRREFLKRLYFEPSITIEGLSTGYLGQGVKTIIPAQASAKMEVRLV
                     PGLEPHDVLDKIRQHLDKHGFDKVEVVFTLGEMSYRSDMSHPAIVNVIELAKKLTPEG
                     VAVLPTSPGTGPMHTVFHALGVPIAGFGLGNANSRDHAGDENVSIADYYSHVELVEEL
                     IASYE"
     gene            complement(4928..5785)
                     /locus_tag="AC1PJC_001640"
     CDS             complement(4928..5785)
                     /locus_tag="AC1PJC_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HIP6620622.1"
                     /translation="MKLKKLFSLATAALSVGVLAACGSSSSSSSSDSSATTVRVGVMS
                     LSDSEQARWDKVQKILGDEVKLEFTQFTDYSQPNKAVAENEVDINAFQHYNFLNNWNQ
                     ENGEDLVAIADTYIAPIRLYSGTADGKNKYTKVEEIPDGAEIAVPNDPTNESRALYLL
                     QAAGLIKVGVSGTELATIADITENKKNLKITELDASQTASSLSSVDAAVVNNTFVLEA
                     GLDYKNALYKEQKDENSKQWYNLIAARSDWEKSEQAAAIKKIIEAYHTDEVKKVIEET
                     SDGMDEPVW"
     gene            complement(5937..6626)
                     /locus_tag="AC1PJC_001641"
                     /pseudo
     CDS             complement(5937..6626)
                     /locus_tag="AC1PJC_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736287.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
     gene            7006..9255
                     /gene="metE"
                     /locus_tag="AC1PJC_001642"
     CDS             7006..9255
                     /gene="metE"
                     /locus_tag="AC1PJC_001642"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009729869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HIP6620623.1"
                     /translation="MTTTIIGFPRIGEHRELKFITEKYFRNEIPQEELLEAAKDLRAK
                     HWNIVKEAGITEIPSNDFSHYDNVLDAAVLFNIVPKAVQNLDLTDLEKYFALARGYQG
                     EKGDVRARPMKKWFNTNYHYIVPAIEKDTEIKLAGHKIFNEFQEAKNLGITTRPVLIG
                     PFTLLQLTDFEEGLTATNFADSLVAAYGQVFEKLAELGAEKIQLDEPSLVKDLTAEEK
                     ALFLRIYQTLLADKKGLQVLIQTYFGDVRDIYTELTSLPVDAIGLDFVEGKETAALVA
                     TGFPANKTLYAGIVNGKNIWRNNYEKSLAVLDAIPAENVVITTSCSLLHVPFTTANEE
                     FEPAILNHFAFAVEKLSELRDLDAIRNGQGEVALTANKELFALERVGRDAALADRLAG
                     LTDADYTRLPVFAEREAIQREKLNLPLLPTTTIGSFPQTKEIRSTRLAFRKGNISEEE
                     YDAFVKTQTDEWIAWQEEVDFDVLVHGEFERNDMVEYFGENLSGYLFSKNGWVQSYGM
                     RGVKPPIIWGDVTRLNPITVKWSSYAQSRTNKPVKGMLTGPVTILNWSFPREDISIKE
                     STLQIALAIKEEVLDLEAAGIKIIQIDEAALREKLPLRRSDWYSEYLDWAIPAFRLVH
                     STVAPDTQIHTHMCYSEFTDIIPAIDNMDADVISFEASRSNLVILDELKAKNFQTQVG
                     PGVYDIHSPRVPAVDEIAHTIQAILAKVPKEKVWINPDCGLKTRGESETKASLIHLTQ
                     AAKAARKEL"
     gene            9259..10119
                     /gene="metF"
                     /locus_tag="AC1PJC_001643"
     CDS             9259..10119
                     /gene="metF"
                     /locus_tag="AC1PJC_001643"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="HIP6620624.1"
                     /translation="MIGQTPSLSFEIFPPKPAVGNEKIIQTLDEMQGLAPHFISVTCS
                     NNNLNVEETTVKLANHVRNELHIPTIAHLPATYLTKEKVRSVLHSLDEIDVHQILALR
                     GDIIEGLLPKEDFQYATDLISFIKEEAPHFDIIGACYPEVHPESPNSVSDIKNLKKKV
                     DAGCSTLVTQLFFDNEAFYNFQEKCSLADIEVPIIAGIMPIINRNQALRLLKTCENIR
                     LPRKFKAILEKYEHNPESLRAAGLAYAVDQIVDLVTNDVAGVHLYTMNNAETARTIHQ
                     ATHSLFKHYS"
     gene            complement(10465..11925)
                     /locus_tag="AC1PJC_001644"
     CDS             complement(10465..11925)
                     /locus_tag="AC1PJC_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015851 - nucleobase transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HIP6620625.1"
                     /translation="MDQFFKLKEHGTTVSTEIMAGLTTFFAMSYILFVNPSVLSVAGM
                     PTQAVFLATIIASAVSTLVMGLFANVPYALAPGMGLNAFFTYTVVIGLGFTWQEALAM
                     VFLCGLFNVFITVTKVRKSIIKAIPVSLQHAIGGGIGVFVAYLGFKNSNLITFLTSGS
                     DIITVNGVAPADATAETFSNGVFSVLAGGGVVPSISTFTDPSVLLTVFGLLLTAVLVI
                     KNVRGAILIGIIATTVAGIPAGVVDLSTIDFATNNIGTAFAELGTTFLAAFGGLSSLF
                     ADSSRLPLVLMTIFAFSLSDTFDTLGTFIGTGRKTGIFSEEDEKALENGTGFNSKMDK
                     ALFADAIGTSIGALFGTSNTTTYVESAAGISAGGRTGLTAVTTAVLFLLSILILPFIG
                     IVPAAATAPALIIVGVMMVSSFLDVDWSQFEDALPAFFAAFFMALCFSISYGIAAAFI
                     FYCLVKVSTGKAKEIHPILWGATALFILNFIILAIL"
BASE COUNT         3754 a         2813 c         2183 g         3360 t
ORIGIN      
        1 ttctattata tttcaaaatt gctagttctc cacactaggt atggtttcca caaaaacagc
       61 ctgctctgcc ttgtccagat aggaacaggt catggcttcg aggtctatga cccacttgta
      121 aatgcctgct tctgctgttt cttggcagaa ggtagggaaa tctgtttgtc ctgcctggtg
      181 attgcgtaaa atggtcacaa actggtccag gttgacttga tcagcaacag gtatcgttac
      241 ctgatagccc tgcttttcca gagtttggtc cgccttcgaa cgatagacaa cctggccaga
      301 ctgtatatcc acaatatttt ccaccatacc caagtcctta aaataggcga tcagtttggg
      361 aaaatcaggc ccagtaaact gctcatgccc gtgattgata ttttctaagg tgaacattgg
      421 tctcctttct ttatagtagc tgtctttcac cttgagatga aaaacaagaa atactcggtc
      481 ggcagacaaa aagaaccaca ttctcttccc ctgtcaacag acataggggc gttgagaacg
      541 cggttccacc ctaatttatt acttcatttg tatgattttg attgagtcgg acatggtcac
      601 gactgggaaa gcgccaatta tttcaagact ggcttggctt tcactctccc aagctcgcta
      661 gacaggcttt tgaaacaacc ttctttcatg cttagtattg tagcagaaaa atcagcattt
      721 gtctagaaag accactattt atccgaacac aatcccgctg acaaatccta caaggctatt
      781 gcaggcctat cgcaatctag tagatatttt tctggtacta ctcccaagaa tttttctgcc
      841 tgttgactga taaaatctag ggcattttcc aaatcttcta ctctatcaga attgaccaac
      901 tccatgacca agaaagcatt ctttgtctca tccgtaatca tggttcgctc accatcgcgc
      961 caattgaaac agcgacaaac ggcgccttta tcatccttat agcaaacttc acctggtaga
     1021 gttggattat tgttttcatc accaatgaga tagaattcat ccccaccctc agtgaccgtt
     1081 agttggagat tgcctacaaa tgtatctaaa tcttcagcac cacatggaag accaaaacgt
     1141 aaactcgccg cattataaat gtccactaat ggagaaattg ttgtgactgg acggtcacta
     1201 gttgaacgtt tcaaaagggc ttcgatacta gaacgtgcgc ctttttttgt tttaaatttt
     1261 tgataggctt gacgatatgt acgaatgacc tcattctcac taaaggtatc ttccgtaaga
     1321 aatttctggg caattccgtt gctttcttcc agtaacttca ctaattcatc aggcgattgc
     1381 gccggcgttt tataatcttt caataataga actccaattt ttgcatctgg aaatagactc
     1441 caaaaagatg aatcaacaac aaattgtgac atattctcac tccttttata caaaaatcag
     1501 caccctatga acatcttcaa agacctaacg atgttcataa aatgctgttg catgactacc
     1561 cggtggcagt aaatatttgg ttgctttcat tgtataatat aactattaaa aaagcaatta
     1621 ataaatcaaa atgcgaaatg cctgatttcc ttactatcta tgactaatct ttctcgtcaa
     1681 gaaatctcca ataaactgga ttacgaagat gataaccaaa atcaaaagag ttgctaaaaa
     1741 ggtcacatca ttattatacc gtaggtagcc gtatgatagc gcaacctgtc ccaagccacc
     1801 tgctccgata gctcctgcca tggcagtata gccgaccaag gaaaccaggg caaaggtcgt
     1861 cacacgaatc aagtcaggca gaccctcacg cagatagaca aggacaatat cccagaaagt
     1921 cgctcctgaa gcctgagccg cctcaatgac accacggtcc aattctgaca agaccacttc
     1981 aacctgacgg gcaaagaaag gaaagactga aagggcgagc ggcaccaaag ctgcctccgt
     2041 accaatcgtt ttcccaacaa taattttcgt caaaggagca atggccgcca acaaaataat
     2101 gaaaggaatg gcacggaaga tagaagctac cttatccaaa atccaataaa ctgtcttatt
     2161 ttcaatgaca ccgcgaggac cagtcaatac caagaacaaa cctgaaacca agcccatcaa
     2221 gccaccaaaa gcaaaggaaa caaaggtcat atagagggtc aaattaaaat gtgttaacca
     2281 acctgtctga ccatcccagc ccaatttata aatatctgga aaattcgttt gaatccattc
     2341 taacatctag tttgctcctt tcaaaatcgt cacttccaca cgcgcctccg tcactgcctc
     2401 aatcgcacgg tgcaactgac cagattcacc tgataagatc accaccatct caccgactgg
     2461 cgtatggtcc aaaatttcaa tattgccata aagaatattg gcagatactt gatagaattt
     2521 atataagtca ttcacaattg ccgtatccgt gttggaacca gcatacttaa gttgcaccaa
     2581 aatactattc tcaggcaaat tcttaacaat atcctgctgg taaattttca ccagggcctc
     2641 atcaattcct gttgctgttt tgatgaaatc ctgtgtcaat tcttcctttg gatgagagaa
     2701 gatttctaaa actgaaccct cttcaatcaa gcgaccatcc tgcataacag ccacacgatt
     2761 acaaatgtct tttacaatct gcatctcgtg ggtaatcatg acaatagtca aacccaattt
     2821 ttcattcaat tcctgcaaga gtgccaaaat ctgcttagtt gttttcggat ccaaggcaga
     2881 agttgactca tctgaaatca agattttagg gtcattggct aaggcacggg caatggcaac
     2941 acgttgtttt tgaccaccgg acaactgagc tggatagttt tcagcacggt cagaaagccc
     3001 aaccaagtcc aacaacttag caactttttc tttcttctct tccttgctca aacccgaatg
     3061 cttaagagca aaggctacgt tttcttctgc cgtcatctga gccattagat tgaaatgctg
     3121 gaaaatcatg ccgatttcac ggcgtttgct ccgcagttga gctggggtaa gtgtgacctt
     3181 ttctccctcg taaattacat cctcatcgat agtaatttta cccgctgtcg gcacctgcaa
     3241 taaattaatc actcgaacaa gggtagattt ccctgctcca gaataaccta cgataccgta
     3301 aatatcccct tgattgatat ggatggtcac atcctttacc gcttcgatcg tacgtttttt
     3361 ctgctggaaa gttacatcaa tattatctaa cttaatcatt tccttactca taacttgcaa
     3421 ttaactcctc tactaattca acatggctat agtagtcagc gatgctgaca ttttcatcac
     3481 cagcatggtc gcgactgttg gcatttccta atccaaatcc tgcaatcggc acgcccaagg
     3541 catggaaaac tgtatgcatg ggtcctgtcc ccggtgacgt cggcaaaaca gcaactcctt
     3601 ctggcgtcaa ctttttagcc aactcaatca cattgacaat ggcagggtgc gacatatcac
     3661 ttcggtagct catctctcct agagtgaaga caacctcaac tttgtcaaaa ccatgtttgt
     3721 ccaaatgctg tcgaatctta tctaatacat catgcggctc caacccaggt accagacgga
     3781 cttccatctt agcagaagcc tgagctggta tgatggtctt gacaccttga ccaagatagc
     3841 cagttgacaa gccttcaatg gtaatcgatg gctcaaaata caaacgcttc agaaactcac
     3901 gacgatcttc taccaaggtt ggaagggtta gtccataaat atccgtcata gactgactgg
     3961 tagccagtgc aaattcttcc actaaggcca attcacgctc atttggctct tgcacttgct
     4021 cgtaaatgcc atctaccaga atttgcccat ctgcagcccg catggattga agtgctgata
     4081 ataaatacca gcttgccgaa tcaatgacac ctccatagga agaatgaata tccaagtcag
     4141 ctgatttgac ctgaagatcg aaggtcacaa ttcctttatt tccaccagca atttctagct
     4201 gatgtaggct attgcgatgc ccttgctccc agacaagcaa atcagcacca atcaagtgtt
     4261 ctttgtattt tgaaaggtat ttgtccaagt caacagaagc tgactcctct gccccctcca
     4321 taataaaaat cacattgact ggtaaatcgc cattctgtct agcttgatat tttttcaagg
     4381 ccgacagacg agctgtgata tggcccttat catcatccac cccacgacca tagatataac
     4441 cttcagaaat agtcaattca aaggggttgc ccttctccca gacctgatcg gcatctgcag
     4501 gtactgtatc ataatgattg tagaaaatca atgttttcgc atctggcacc gaagcctcaa
     4561 acctagccat gacaaatggt gctgcatagc tgtcgtctaa aataacatct gccccagcct
     4621 cttcaaacat ttctttcaaa taagtcgcca catccaacaa accaatctgc tgagcaaaaa
     4681 tagatttctt tgaaatcaag accttcaact tttcaaaata ggtttgaata atcgcatcat
     4741 tttcaaatgc ttgaacttta ctatctgcca tactttctcc tcatactcaa tgaaaatcaa
     4801 ttaaatctac taaccaaaat caaatatcct cccacatttc tgactttggt taagagattt
     4861 tttcttatct ctataaaaac agatagaggg ctgaacaatt ctgcccagtc ctcaacctat
     4921 ttacatttta ccaaactggc tcatccatac cgtctgaagt ctcttcaata acttttttca
     4981 cttcatccgt gtggtaggct tcgataattt tcttaatcgc tgctgcttgc tctgattttt
     5041 cccaatcgct acgagctgca atcaagttgt accactgttt tgaattttca tctttttgct
     5101 ctttgtaaag ggcatttttg taatccaaac cagcttccaa cacaaatgta ttgtttacaa
     5161 ctgctgcatc aactgagcta agtgagcttg ctgtttggct tgcatccaac tcagtaattt
     5221 tcaagttttt cttgttttca gtaatatcag caatagttgc caattctgta ccagatacac
     5281 caaccttgat caaaccagct gcttgaagaa ggtaaagagc acgactttcg tttgttgggt
     5341 cgtttggaac cgcaatttct gcaccatctg gaatttcttc cactttagtg tacttgtttt
     5401 ttccatcagc tgtacctgag taaagacgga ttggtgcgat ataagtatcc gcaatagcaa
     5461 ccaagtcttc accattttct tgattccagt tattcaagaa gttgtagtgt tggaaggcgt
     5521 tgatgtctac ttcgttttct gctactgcct tgtttggctg tgagtaatct gtaaattgag
     5581 tgaactccaa tttcacttca tcaccaagaa ttttttgaac tttatcccaa cgagcttgct
     5641 cagaatcgct caaactcatc acacccacac gaacagttgt tgctgaagaa tcagatgaag
     5701 agctagaaga cgagctacca catgcagcaa gtacacctac tgataaagca gctgttgcca
     5761 aactaaacaa tttttttaat ttcataaaat gatctcctta aattagaact gtatctatct
     5821 taacacagaa ttttctttct gactaattga ctttttttat agaaagttat aacttttcgt
     5881 tataacaaat acccttgcaa ttataagtat tgataataaa aagagggata cccctcttaa
     5941 aatatatcta ctaaatactg aaacaggtct cgatgttgct tacaatcatt gtataaaaat
     6001 tctggatgcc attggatacc aaacaaagct tggttccctc tactttcata agcttctatc
     6061 gtaccatctc taggatccaa acctgtcgcc accagtcctg gagccaattc tttgattcgt
     6121 tgctgatgga aggaattaat agagctccct tgggcaaaca gttgaccgat tcggctttta
     6181 ggtttcactt gtaaacgatg ggatgtccca gcaataccat cttaccaatg atgagccacc
     6241 tcctgctcta aactaccacc tagagcaaca ttgagcaact gcatccctcg gcagactgca
     6301 aaaatgggct tcccttgacg aagggcttcc tcaatcaaag ccagttcaaa ttcatcccgt
     6361 tccaagaggt aatcattact atcaatcaag cgttcttgac catatagact ggggtctaca
     6421 tgctgaccgc ctgataaaat caacttatca atcatgttga tatagtcctt ggctaagtca
     6481 ggagttccca taggaataac cattggtaca ccacctgcct gacgcacacc atctgccaat
     6541 tcactcgcaa cggttacata agttcgacca gatttagttg gaaattcttg ctcgtttcct
     6601 gaaattccaa tgataacttt tcccataaaa agcccctttc tttcattttt tcaattgtag
     6661 catggctacc tagccctgtc taatatagaa gttttatggc ttgataaaaa ataactatca
     6721 gaactaccta taaacaattg ctcataaaca agagtttgcc tttagcagtt tcatagataa
     6781 aatctatacc acgcttaaga aaaaactata ctggagccag cataaaaaag tcaagcttga
     6841 taaacaggct tttttcaagc ttttatatag aagaaatatc aaaaaagtag ctctcttcaa
     6901 atctgttata gtcaaaagtt ataacctcct ctaatttttt acaattatac aagagtcgtt
     6961 ttttctgtta ggataggggc atagaaatat tttggaggaa aaaccatgac tactactatt
     7021 atcggcttcc cacgtatcgg agaacaccgt gagttaaaat ttatcactga aaaatacttt
     7081 agaaatgaaa ttccacaaga agagcttttg gaagcagcta aagacctacg tgccaagcac
     7141 tggaatattg ttaaagaagc aggcattact gaaatcccaa gcaacgactt ctcccactat
     7201 gacaatgttt tggatgcagc tgttctcttc aacatcgtac ctaaagcagt acagaacctt
     7261 gacttgactg accttgaaaa atacttcgct cttgcacgtg gttatcaagg agaaaaaggg
     7321 gacgttcgtg ctagaccgat gaaaaaatgg ttcaacacca actaccacta tatcgttcca
     7381 gctattgaaa aagatacaga aatcaaacta gccggtcata agattttcaa tgaattccaa
     7441 gaagcaaaga acttgggcat cacaactcgt ccagttttga ttggtccatt cacactctta
     7501 caattaactg attttgaaga aggtttaact gctactaatt tcgctgatag cttagttgca
     7561 gcctacggac aagtctttga gaaattggca gagcttggtg ctgaaaaaat ccagctggac
     7621 gaaccgagct tggtcaagga tttgactgct gaagaaaaag cccttttcct acgtatctac
     7681 caaacactct tggcagataa gaaaggtttg caagttctca tccaaaccta cttcggtgat
     7741 gttcgtgata tttacacaga attgaccagc ctaccagttg atgccatcgg tcttgacttt
     7801 gtagaaggta aggaaactgc tgcacttgtt gcgacaggtt tcccagctaa caagaccctc
     7861 tacgctggta tcgtcaacgg taaaaatatc tggcgcaaca actacgaaaa gagcctggct
     7921 gttttggatg ctattccagc tgaaaatgtc gttataacaa cttcttgctc ccttcttcat
     7981 gtacctttca caacagcaaa tgaagaattt gaaccagcta tcctcaacca ctttgccttt
     8041 gcagttgaaa aactgagcga attgcgtgat ttggatgcca tccgtaacgg tcaaggcgaa
     8101 gttgctctca cagctaacaa ggaactcttt gcccttgaac gtgttggtcg tgatgcagcc
     8161 cttgcagacc gtcttgcagg actgacagac gctgactata cacgcctacc agtctttgca
     8221 gagcgtgaag ctattcaacg cgagaagcta aacttaccac ttcttccaac aaccactatc
     8281 ggttccttcc ctcaaaccaa agaaattcgt agcacacgct tagctttccg taaaggaaat
     8341 atctcagaag aagaatacga tgcatttgtc aaaactcaaa cagatgagtg gattgcatgg
     8401 caagaagaag ttgacttcga cgtcttagtt cacggtgagt ttgaacgaaa cgacatggta
     8461 gaatacttcg gcgaaaacct gtctggttac ctcttcagta aaaacggttg ggtacaatcc
     8521 tacggtatgc gtggagttaa accgccaatc atctggggtg atgtaacacg cttgaaccca
     8581 attactgtta aatggtctag ctatgctcaa agccgtacca acaaaccagt caaaggtatg
     8641 ttgacaggtc ctgtaaccat cctcaactgg tcattcccac gcgaagatat ttctatcaaa
     8701 gaatcaaccc ttcaaattgc tcttgctatc aaggaagaag ttcttgacct tgaagcagct
     8761 ggaattaaga ttatccaaat cgacgaagca gcccttcgtg aaaaactacc actccgtcgt
     8821 agcgactggt acagcgagta tcttgattgg gcaatccctg ccttccgttt agtacactca
     8881 actgttgcac cagatacaca aattcacact cacatgtgct atagcgaatt tactgacatc
     8941 attcctgcca tcgacaacat ggatgcggac gttatctcct ttgaagctag ccgttcaaat
     9001 cttgttattc tagatgaact taaggctaag aacttccaaa ctcaggtagg tcctggtgtc
     9061 tatgacatcc actctccacg tgtccctgcc gttgatgaaa ttgcacacac aatccaagcc
     9121 atccttgcta aagtaccgaa agaaaaagtt tggattaacc cagactgcgg actcaagact
     9181 cgtggcgaat cagaaacaaa agctagtctt atccacttga ctcaagcagc taaggcagcc
     9241 agaaaggaac tctaatttat gattggtcaa accccaagtc tctcatttga aatttttcct
     9301 ccaaaaccag cagtaggcaa tgaaaagatt atccaaactc tcgatgagat gcaaggtttg
     9361 gcccctcatt ttatcagtgt tacatgcagc aataacaatt tgaacgtaga agagactact
     9421 gtcaagttgg ctaaccatgt tcgcaatgaa ttgcatattc caactatcgc acatttgcca
     9481 gctacttact tgacaaaaga aaaggtccga tccgttctcc attctctcga cgaaattgat
     9541 gtccatcaga ttttagccct gcgtggcgat attattgaag gtcttctccc taaagaggac
     9601 ttccaatatg caactgactt gatttccttt atcaaggaag aagctccaca ttttgacatt
     9661 attggagcct gttatccaga agtacatcca gaatcaccaa attctgtctc agacatcaaa
     9721 aatttgaaaa agaaagttga tgccggttgc tcaaccttgg taactcaact cttcttcgat
     9781 aacgaagcgt tctataactt tcaggagaaa tgttctctag cagacatcga agtgcctatt
     9841 atcgccggta ttatgcctat catcaacagg aatcaggcac ttcgactctt gaaaacctgt
     9901 gagaatatcc gcctccctcg taaattcaag gccatcttgg aaaaatacga gcacaatcct
     9961 gaatctcttc gggcagcagg cctagcttac gccgttgatc agattgtcga tttggtaacc
    10021 aatgatgtcg caggtgttca tctttatacc atgaacaatg ccgaaacggc ccgcaccatc
    10081 catcaggcaa ctcattcgct attcaaacat tatagttaga aaactcccct gagcccaagc
    10141 tcaggggtta ttctatgccc tgtgactccc aaagactaca tgataaattt ttcaccccat
    10201 caggacatta atccagcaga tgtctaggta tgtgacatct tgcttacaat aacaaacagc
    10261 catttaaaat acagtcacaa ggagtaaaaa tggcactaag aggagacaga gaagcgacga
    10321 aatggaaaat aaactccatc cgttttcaaa ttacaacgtt cacgacagta ttttattaac
    10381 tgaaacacag tgatttacat aaattttgat ggcaaataaa aaactgacct tcaaatgaag
    10441 atcagttcaa ggataataaa cagattacaa gatggctaga atgatgaaat tcagaataaa
    10501 tagagctgtg gcaccccaaa ggattggatg aatttcttta gccttaccag ttgaaacttt
    10561 tactaagcaa tagaagataa aggctgctgc aataccgtaa gagatagaga agcaaagcgc
    10621 catgaagaag gccgcaaaga aggctggaag agcgtcttcg aattggctcc aatccacatc
    10681 taggaatgat gaaaccatca tgacaccgac aataatcaaa gctggagctg ttgccgctgc
    10741 tggtacaata ccgataaatg gcaagataag aattgaaaga aggaagagaa ccgctgttgt
    10801 aacagctgtc aaaccagtac gaccacctgc agagatacct gcagctgact ccacataggt
    10861 tgtggtattt gatgtaccga agagggcacc gattgaagta ccaatcgcat ctgcaaagag
    10921 cgccttgtcc atcttagagt tgaagcctgt accattttcg agagctttct catcttcttc
    10981 tgagaaaata ccagtcttac gacctgtacc gataaaggta ccaagtgtgt caaaagtatc
    11041 tgacaagctg aatgcaaaga tagtcatcaa aacaagtggt agacggcttg agtcagcaaa
    11101 gagcgaagat agaccaccaa aagctgctaa gaaagtcgtc ccaagctccg caaaggctgt
    11161 accgatattg ttagttgcaa aatcaattgt agacagatcc acaacacctg ctggaattcc
    11221 agctacagtc gttgcaataa taccaatcaa aattgctcca cgcacgttct taataaccaa
    11281 aacagctgtc aagaggagac cgaacactgt caagagaaca cttggatcag tgaaggttga
    11341 gatagaagga actacaccac cgccagctaa gacagagaaa acaccatttg agaatgtttc
    11401 tgctgttgca tccgccggag caacaccatt tacagtaata atatctgaac cagatgtcaa
    11461 gaaggtgatt aaattagagt ttttaaaacc aagataggca acaaatacac cgataccacc
    11521 accgatggca tgttgtaaac taactggaat cgccttgata atactcttac gaacctttgt
    11581 aactgtgata aaaacgttaa acaaaccgca gaggaaaacc attgccaaag cttcttgcca
    11641 agtaaaacca agaccaataa ccactgtata ggtaaagaag gcattcaacc ccatacctgg
    11701 tgccaaggcg taaggtacgt tagcaaataa tcccataaca agcgttgata cagcactggc
    11761 aattattgta gccaagaaaa cagcctgtgt tggcattcca gcaacactta acacactagg
    11821 gttaacaaac aagatatatg acatggcaaa gaaagtcgta agtcctgcca taatttctgt
    11881 tgaaaccgtc gttccatgtt ctttcaattt aaaaaattga tccatttttt catttctcct
    11941 tttaatttac gaacgataaa aacattataa tcaaaaaaca ttctaatttc aagtttttta
    12001 atcttgaaaa cgttatttca ttaattttca actcaaaaca ttcgtaaatc ccgaacattg
    12061 cgaacttaca aaaaaatcta tacaaaatta cttgcttctt tgcttttatt
//
LOCUS       DBNFCX010000070        11878 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.070, whole genome shotgun sequence.
ACCESSION   DBNFCX010000070 DBNFCX010000000
VERSION     DBNFCX010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 11878)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11878)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11878
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.070"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..903
                     /locus_tag="AC1PJC_001645"
     CDS             <1..903
                     /locus_tag="AC1PJC_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HIP6620626.1"
                     /translation="ELLARALGFIFVIGLGYTLKVKGIVRREDARIFSSLVMNITLPA
                     SLLVASATAQVSIDLYLPFILGILCNLFLDMVGYWEAKKSGQQTSVGLMQLSGYNIGT
                     FTLPFVQAFFPLSSLLSVIVFDAGNAIMVLGGNYSIAAGVDEEQERMTVATFIKNLSR
                     SVPLVVYLVSLSLAVCSIKLPRELISALTIASNANPFLAMLMLGILLDLKLNWKEISR
                     LAYLLSLRLGANILIAGVIYFLLPIDKTMKIMLLVCLVSPISVMSPIYALKLGSRSAE
                     PANVNSLSILVSLVMMVLLIFLFV"
     gene            complement(939..1337)
                     /locus_tag="AC1PJC_001646"
     CDS             complement(939..1337)
                     /locus_tag="AC1PJC_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5684 domain-containing protein"
                     /protein_id="HIP6620627.1"
                     /translation="MTEETLAQGILIGIWGTTLLFSFIWYILVAISNYILFKKAGYAG
                     WKSLIPIYNLYIQQCIAFGYEKRWFILFLLIPLAGPLYGIYLVYNFGRSFGLSAVQAI
                     FYVLLTPIFNLYIAFNDGSRYQGPQEFFID"
     gene            complement(1465..2685)
                     /gene="pepT"
                     /locus_tag="AC1PJC_001647"
     CDS             complement(1465..2685)
                     /gene="pepT"
                     /locus_tag="AC1PJC_001647"
                     /EC_number="3.4.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0045148 - tripeptide aminopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase T"
                     /protein_id="HIP6620628.1"
                     /translation="MKYPTLLDRFLVYVKENTRSDENSTTTPSTQNQVEFAQNILLPE
                     MKRIGLQNVHYLPNGFAVGTLPANDPSLTRKIGFIAHMDTADFNAEGVKPQIIENYDG
                     NPIALGTSGYELHPKDFPQLANYHGQTLITTDGTTLLGSDDKSGIAEIMTAIEFLVQN
                     PDIKHCEIRVGFGPDEEIGVGADKFDVKDFDVDFAYTMDGGPLGELQYETFSAAGAKI
                     DFLGRNVHPGSAKDQMINAFQMAIDFHNALPEADRPEKTEGYEGFFHLMNMEGSVDTA
                     STTYIIRDFEEEDFQARKQLMLDIAEKMNAKFDTPRVIVNLHDQYYNMKKIIEKDMTP
                     INIAKDVMENLGIKPLIEPVRGGTDGSKISFMGIPTPNIFAGGENMHGRFEFVSLETM
                     EKAVDVILGIVAYK"
     gene            complement(2695..3510)
                     /locus_tag="AC1PJC_001648"
     CDS             complement(2695..3510)
                     /locus_tag="AC1PJC_001648"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HIP6620629.1"
                     /translation="MIKLIALDMDGTLLNEKKELMQPQIDAIHQAVEAGIKIVLCTGR
                     PLAGVKPFVEQLGFDTEEEFIIVNNGCSTHSTKDWSLIDWEELSISDIDYLSTFIKND
                     DVQISLFDEEDYFVLAEKANARVNLDAGLVGMTPQPIDLKEAKSGQHRFFEAMFVGEK
                     VHIDAFENQHNPVLSKRYSTVRSQDYLLEILPNGASKATGLKKLADRIGILPEEIMAM
                     GDANNDLEMIEFAGFGIAMGNANEQVKAIAQDITDTNENNGVAKAIEKHILNK"
     gene            3924..4307
                     /locus_tag="AC1PJC_001649"
     CDS             3924..4307
                     /locus_tag="AC1PJC_001649"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HIP6620630.1"
                     /translation="MLATDSGFARWFPQLNIVGNTLVFEMEGFREVMDLLEYRKNEKI
                     AYRWDSATVSFALSQLENQTLITFEERIPEDFGNEFANAQKDMTGWLVQNECIKKVLE
                     GQEPPVYQPLQEKWKTFLELELEGL"
     gene            4325..4582
                     /locus_tag="AC1PJC_001650"
     CDS             4325..4582
                     /locus_tag="AC1PJC_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620631.1"
                     /translation="MKKWWEQLKEEYYETRFDSNEDWMEWFIKRKMTWGWRWPTAITI
                     FVLWALSLPDARNAVRFFYFLLALGVATVLHKLISYLKRRK"
     gene            4589..5842
                     /locus_tag="AC1PJC_001651"
     CDS             4589..5842
                     /locus_tag="AC1PJC_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2130 domain-containing protein"
                     /protein_id="HIP6620632.1"
                     /translation="MHQITCPHCGTAFQVNETEYSQLLAQVRGAEFDKEIQERLERER
                     ELLSQKAENDLQARLSDKDKEILELTAKLDKFASQTELEISSAISKKDQEIQELKAQL
                     GQIGLAKDLELQQAVAQVEKERDAAQNALVLQEQKQELALATTRQEYEVRLKAADEQV
                     EFYKNFKAQQSTKAIGESLEQFAEAEFNKVRSYAFPRAKFAKDNEVSASGSKGDFIFR
                     DFDESGLEFISIMFEMKNEADTTKTKHKNADFFKELDKDRREKKCEYAVLVSMLEADN
                     DYYNTGIVDVSHEYEKMYVIRPQFFIQLIGILRNAALNSLQYKQELALVKEQNIDITH
                     FEEDLEIFKNAFAKNYQSASNNFQKAIDEIDKAIKRMEAVKAALTTSENQLRLANNKL
                     DDVSVKKLTRNNPTMKAKFEALRGD"
     gene            5844..6338
                     /locus_tag="AC1PJC_001652"
     CDS             5844..6338
                     /locus_tag="AC1PJC_001652"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIP6620633.1"
                     /translation="MIVPLQFEHILQLDEAFQKQGWPSRKEILTNYLREQEKGERIVL
                     VAEEAGACKGYITLIKQVKEGPFYQSGIPEIADFNVFEDFQKQGIGWQLLDAICQLAS
                     EFMDIVGIGVGLNANYGKAQRLYVKHGFIPDGSGVWYRGRSLPVGAKAYNDDELALYF
                     TKKL"
     gene            6351..6584
                     /locus_tag="AC1PJC_001653"
     CDS             6351..6584
                     /locus_tag="AC1PJC_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006739232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1858 domain-containing protein"
                     /protein_id="HIP6620634.1"
                     /translation="MNTIDLNLPVAEIINQHPEVKEILVELGFKPLANPAMLNTVGKV
                     TSLKTGSKMTKIPLDRIQQVLECNGYEVIGGEK"
     gene            6581..7906
                     /locus_tag="AC1PJC_001654"
     CDS             6581..7906
                     /locus_tag="AC1PJC_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002312832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF438 domain-containing protein"
                     /protein_id="HIP6620635.1"
                     /translation="MSEKRIDILKNILMDLHNGASPESVQDQFNQHFTGVSALEISLM
                     EHELMSSDTGITFEDVMSLCNIHANLFKGAIADVEVADMDQEGHPVYVFKQENLALRA
                     ALLRIRRILDQYEQTEDAELQDQLQQGLTRQFGLLGQFENHYTRKEKVFFPIMERYGH
                     DAPPKVMWGVDDEIRDLFKTARKALATGDLAATRVHFENFAEEFEEMIFKEEAILLMI
                     LLETFTQDDWLQVAEDSDAYGYAIVKPTAKWVPHREAFGEIAEQTADSLAPQPDGSNQ
                     QIIDTPEGQFTITFKPKEKSETIQDRTSPQTFGNGYLSVEQANLILNHLPLELTFVNK
                     DDIFQYYNDSHPVEDMIFKRTPSQIGRHVELCHPPKILDKVKKIFELLRTGQKDQVTM
                     WFKSESMGKFVYVVYKAVRDDQGEFQGVLEYVQNIQPFFEIDSDFHREI"
     gene            7947..8591
                     /locus_tag="AC1PJC_001655"
     CDS             7947..8591
                     /locus_tag="AC1PJC_001655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620636.1"
                     /translation="MKNLKEKKNQGTVIPLGIASFSLLMGVSLLLFAGTAGGLNIILS
                     IPPLIVAGLGFFYVKYRRETTIKMYNKMYDRYPELQNNLQLLVDKADYYDSAIGIVVY
                     KHLIVSLKDGIKVFHLDEVIWLYLHILRGGFASIYSQTLMVGTVLNDRHTLLSLPILG
                     TSRVADPNIEKLFEFIGARHPKIMLGYTNENNQFWGVLRSEDKNQKTDYFDFLR"
     gene            8648..9523
                     /gene="truB"
                     /locus_tag="AC1PJC_001656"
     CDS             8648..9523
                     /gene="truB"
                     /locus_tag="AC1PJC_001656"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005590179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HIP6620637.1"
                     /translation="MSGIINLKKEAGMTSHDAVFKLRKILQEKKIGHGGTLDPDVTGV
                     LPIAVGKATRMIEFMQDEGKIYEGEITIGYSTTTEDASGDLVERTPVLDIAEQVVDEA
                     MASFVGTITQIPPMYSAVKVNGRKLYEYARAGEEVERPQRQIDIYSFERTSPIELADD
                     CARFTFRVRCGKGTYVRTLSVDLGAKLGYASHMSKLERTGSAGMDLSDALTLEEISSL
                     VAENDFSFLQPIERGIGDLPVVELKEEQVQDATFGRFVELNAEAERLAGFHDGQLIAI
                     FEKRDQLYKPSKVLV"
     gene            9558..10481
                     /locus_tag="AC1PJC_001657"
     CDS             9558..10481
                     /locus_tag="AC1PJC_001657"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HIP6620638.1"
                     /translation="MNIRTIKHYSELNQEEPTVLVLGYFDGIHLGHKALLDRARKVAD
                     EQGLTVTVLTFPESPRLAFSRFSPELLLHLTSQEQRYLLLKKYGVDNLILTDFTSEFA
                     NNTPQQFLDRYIKGLNAQILVAGFDYHFGNCRADVTDLTALFDGQVEIVEEVCLDGEK
                     VSSTRIRQAIQAGNVELANRLLGYTFMTEGIVVHGDARGRTIGYPTANLAPFDRVHLP
                     SEGVYVADVEVDGKRYRAMTSVGKNVTFDGAEMRIEAHIFGFDRFIYGEKITIFWLEK
                     IRDMVKFDGIEGLMEQMKSDEEFALQWGKYA"
     gene            10474..11211
                     /locus_tag="AC1PJC_001658"
     CDS             10474..11211
                     /locus_tag="AC1PJC_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005216 - monoatomic ion channel activity
                     [Evidence IEA];
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0071805 - potassium ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium channel family protein"
                     /protein_id="HIP6620639.1"
                     /translation="MLKRLIRHPFYEKAMTYIAVVYVFLIVLELMDASIANSSGYRVL
                     DLLLWFVFVCDYFAQLYYADDILEYVQGHILELIAIIPFDSFFSFLRLGRLARLFRLV
                     KVTRIFALSNRFWDTINKLLHTNSLSKVLMLNISAVLVASVLLSVIEGKSFFDALWWS
                     IVTMTTVGYGDIVPQDTISKIIAILLMLVGICTFGMVTSTITRFFSETERETKLDTLM
                     AKIDEQNEILLRLEKKIESLEKLQGRD"
     gene            11285..11686
                     /locus_tag="AC1PJC_001659"
     CDS             11285..11686
                     /locus_tag="AC1PJC_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spx/MgsR family RNA polymerase-binding
                     regulatory protein"
                     /protein_id="HIP6620640.1"
                     /translation="MITLFLSPSCTSCRKARAWLTSHEVPFIEHNIMTSPLTAEELKN
                     ILALTENGTDDLISTRSKVFQKLDIDVDELSVKQLIGLIETYPSLLRRPIILDEKRMQ
                     IGFNEDEIRAFLPRKYRKQELRNATLRAEIG"
     gene            11692..>11878
                     /locus_tag="AC1PJC_001660"
     CDS             11692..>11878
                     /locus_tag="AC1PJC_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002286915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0223 family protein"
                     /protein_id="HIP6620641.1"
                     /translation="MNKNYSYPLDFSWSTEEISSVLSFLNQVEAAYEKGADAVAILAS
                     YKNFKDVVKSKGQERQID"
BASE COUNT         3454 a         2185 c         2770 g         3469 t
ORIGIN      
        1 gaattattag cccgtgctct cggttttatc tttgttatcg gtttaggtta tacattaaaa
       61 gtcaaaggga ttgttcgaag ggaagatgca agaatctttt ctagcttagt gatgaatatt
      121 acgctaccag cttctctcct tgtagcttca gcgacagccc aagtatctat agatttatac
      181 cttcccttca tattagggat tctttgtaat ctttttttgg atatggtggg atactgggaa
      241 gcaaagaagt ctggtcaaca gacttccgtc ggtcttatgc agttatcagg ctataatatc
      301 ggaaccttta cactcccatt tgtgcaagct ttttttccgc tatctagtct actaagcgtc
      361 atcgtatttg atgcggggaa tgcaatcatg gttctaggtg ggaattacag tatcgcagct
      421 ggtgtggatg aagagcagga aagaatgacc gttgcaactt ttataaagaa tctttcacgc
      481 tcagttccac tagtagtcta tctagttagc ctatcgttag cggtctgctc tatcaaactt
      541 ccacgcgaac ttatctctgc gctgacgata gccagtaacg ccaatccttt tttagccatg
      601 ctcatgttgg gaatcttgct tgatttaaaa ttgaattgga aagaaattag tcgattggcc
      661 tatcttctct ctttgaggct gggtgcgaat attctaatag caggagtcat ttattttctt
      721 ctacctattg ataaaacgat gaaaatcatg ttgctggtct gtctagtctc tccaatttca
      781 gtcatgtccc caatttatgc attaaagtta ggtagtcgct cagctgaacc tgccaatgtt
      841 aactccttat ctattttggt cagcctagtc atgatggttc ttcttatttt tctattcgtt
      901 taaaaaagcc tccgcgtgtg cgggggcttg attgtatatt aatcaataaa gaattcttgt
      961 ggaccttggt aacgacttcc atcattaaag gcgatgtaga ggttaaagat aggtgtaaga
     1021 agaacataga agatagcttg tacagctgat aaaccgaagc tacgaccaaa attgtaaacg
     1081 agatagatac catataatgg tcctgctagt ggaatcagta agaatagaat gaaccatctt
     1141 ttttcatagc caaaggcgat gcattgttgg atatagagat tgtagattgg aatcaatgat
     1201 ttccaaccag cgtagcctgc ttttttgaag aggatgtagt tggaaatagc aacaagaata
     1261 taccaaataa atgaaaatag tagtgttgta ccccaaatgc caatgagaat tccctgtgct
     1321 aatgtttctt ctgtcataat aaaactccat ttctttttta tagttctatt atagcagtat
     1381 tagttcaata acacaacata aaattgcatt tttttaaaat tttttcagaa aaaaacgact
     1441 ttctattgaa agccgtttga aattttattt gtaagcgacg attccaagga tgacatcaac
     1501 agctttttcc atggtttcca agctgacgaa ctcgaagcga ccgtgcatgt tttcgccacc
     1561 tgcgaagata tttggcgttg gaatgcccat gaaggaaatc ttagagccgt ctgttcctcc
     1621 gcgaacaggc tcaatcagtg gcttgatgcc tagattttcc atgacgtctt tggcaatgtt
     1681 aattggagtc atatcttttt cgatgatttt cttcatgttg tagtactggt catgtaggtt
     1741 gacaatgaca cgtggagtgt caaacttggc attcatcttt tcagcgatgt ccagcatgag
     1801 ttgcttgcgg gcttggaaat cttcttcctc aaagtcgcgg atgatatagg tggtagaagc
     1861 agtatcaacg ctgccctcca tgttcatcaa gtggaagaaa ccttcatagc cttctgtttt
     1921 ctcagggcgg tctgcctcag gaagagcatt gtggaaatca atagccattt ggaaggcatt
     1981 gatcatctgg tccttagcag atcctgggtg gacattgcgt cctaggaaat caatcttggc
     2041 acctgctgct gagaaggttt cgtactggag ttcgcccagc ggtccaccgt ccatagtgta
     2101 ggcaaagtcc acatcgaagt ctttcacatc aaacttgtct gctccgacac ctatttcttc
     2161 gtcaggacca aagccgacac ggatttcgca gtgcttgatg tcaggatttt ggactaggaa
     2221 ttcaatcgct gtcatgattt ctgcaatccc tgacttgtca tcagagccta gcaaagttgt
     2281 accgtcagtg gtaatcaggg tttgaccgtg gtagttggca agttgtggga agtcttttgg
     2341 atgcaattca tagccagaag ttcccaaagc gattgggttg ccgtcgtagt tttcgatgat
     2401 ctgaggcttc acgccttctg cgttgaaatc cgccgtatcc atgtgggcga tgaagccaat
     2461 cttgcgggtc aaacttgggt cgttggcagg cagtgttccc acagcaaagc cgtttggtag
     2521 gtagtggaca ttctgtaagc cgatgcgttt catttcaggc aagagaatgt tttgtgcgaa
     2581 ctcaacttgg ttttgggtag aaggtgtggt ggtcgaattt tcatctgagc gagtattttc
     2641 tttgacatag actaaaaaac ggtctaagag tgttgggtat ttcatattgt ctccttattt
     2701 gttcaaaata tgtttttcaa tggctttggc aacgccgttg ttttcattgg tgtctgtgat
     2761 gtcctgggcg atagccttga cctgctcgtt agcgttgccc atggcaatac caaatccagc
     2821 aaattcaatc atttccaggt cgttgttggc atctcccata gccatgattt cttctgggag
     2881 gataccgatg cggtctgcca gttttttcaa accagttgcc ttgcttgcac cgtttggtaa
     2941 aatttccaag agatagtcct gtgaacgaac ggtggaatag cgtttgctga gtacaggatt
     3001 gtgttgattt tcaaaggcat cgatatgcac tttttcaccg acgaacatgg cttcaaagaa
     3061 gcgatgctga cctgacttgg cttcttttaa atcaattggt tgaggagtca ttcctactaa
     3121 acctgcgtct aaattaacgc gtgcattggc tttttctgca agaacgaagt agtcttcctc
     3181 atcaaaaaga gagatttgca catcatcatt tttaataaaa gtggaaagat aatcaatatc
     3241 agagatagat agttcttccc agtcaatcag gctccaatcc tttgtcgaat gcgttgaaca
     3301 gccgttattg acaatgataa attcttcctc ggtgtcaaag ccgagctgct ctacgaaagg
     3361 tttaacacca gccaagggcc gaccagtaca aagaacaatc ttgatgcccg cttcaacagc
     3421 ctgatgaatg gcatcaatct gtggctgcat cagctctttt ttctcgttta aaagggttcc
     3481 gtccatatca agagcgatta gtttaatcat ataaacctcc ttgttttcaa tacatctagt
     3541 atagcacaaa atgagaaagg aatgattgaa atactaaact ctgttctata tattaaaata
     3601 aattaggtga cgaatgaaat atagaagtgt ttcaaaaatg acaatgttca ttatgtgtca
     3661 agaaagttta acattgctag gggatacaaa acatggagta tgagccagat aaacagtgtg
     3721 tctaatggag cgaatagcac tcatgcttga ttatgcttaa agaatagaga caatggaaat
     3781 atcggctatg gaccagtatt ttttggtata atagaggaat agaagaggag ttatgtatga
     3841 agattagtgt tcagaaagag tccgagatgt accggctaac tatttcctat attgttcaaa
     3901 ctagtttggc ggagtcctag gatttgttgg cgacagatag tggttttgct cgctggtttc
     3961 cacagttgaa cattgtagga aatacgctgg tttttgaaat ggaaggattc cgtgaagtta
     4021 tggatttact ggaatatcga aaaaatgaga aaattgccta caggtgggat tcagcaacag
     4081 tttcatttgc actgtctcag ctagaaaatc agaccttaat tacttttgaa gaacgaattc
     4141 cagaagattt tggtaatgaa tttgcgaatg ctcaaaaaga catgacagga tggttggtgc
     4201 aaaatgaatg tatcaaaaaa gtcttagaag gtcaggagcc acctgtatat caacccttgc
     4261 aggaaaagtg gaagactttt ttggagcttg aattagaagg tctgtgatct gaaaggaggt
     4321 tgttatgaaa aagtggtggg aacaactgaa agaagaatat tatgaaacac ggtttgattc
     4381 taatgaagat tggatggaat ggtttatcaa acggaagatg acctggggct ggagatggcc
     4441 gactgccata acgatttttg tcctttgggc tctatcactt ccagatgcta gaaatgcggt
     4501 tcgtttcttt tattttttat tggcgctggg agtagctacg gttttacata aattaatatc
     4561 ttatttgaaa agaagaaagt gagagtatat gcatcaaatt acttgccccc attgtgggac
     4621 ggcctttcag gtcaatgaaa cagaatacag tcaactctta gctcaggtgc gaggtgcgga
     4681 gtttgacaag gaaatccaag aacgattgga gcgggaacgg gaattattaa gccagaaggc
     4741 tgaaaatgat ttgcaggcta gattgagtga taaggataag gagattctgg aactgaccgc
     4801 aaaacttgat aaatttgcta gtcagacgga actggaaatt agctctgcta tttccaaaaa
     4861 agaccaagaa atccaagagc ttaaggctca gttggggcaa atcggtcttg ccaaggactt
     4921 ggagttgcag caggcggtag ctcaggtgga aaaagagcgg gatgcggcac aaaatgcttt
     4981 ggttttgcag gaacaaaagc aagagttagc cctggcgacc actcgtcagg agtacgaagt
     5041 acggctcaag gcggcggatg agcaggtgga attttacaaa aatttcaagg cccagcagtc
     5101 tactaaggca attggtgaga gcttggagca atttgctgag gcagagttta acaaggttcg
     5161 ttcctatgct tttccacgtg ccaaatttgc gaaggacaac gaagtatcag cgtccggttc
     5221 aaaaggagat ttcatcttcc gtgattttga cgagtcgggc ttggaattta tttccatcat
     5281 gttcgaaatg aaaaacgagg cagatacgac caagaccaag cataaaaacg ctgatttctt
     5341 taaggagttg gataaggacc gtcgggagaa aaaatgcgaa tatgctgtat tagtcagcat
     5401 gctagaggcg gacaatgact attacaatac agggattgtg gatgttagtc atgaatatga
     5461 gaagatgtat gttatccgac cacagttctt tatccaatta atcggaattt tacgaaatgc
     5521 tgcgcttaat agtctgcaat acaagcagga gttagccttg gttaaggagc agaatatcga
     5581 tattactcat tttgaagaag atttggaaat tttcaagaat gcttttgcaa aaaactatca
     5641 atcggccagc aacaatttcc aaaaggctat tgatgaaatc gacaaggcaa tcaagcggat
     5701 ggaagctgtc aaggcagccc tgaccactag cgaaaaccag ctccgccttg caaataataa
     5761 actagatgat gtctccgtca aaaaactaac ccgcaataat ccaactatga aagccaagtt
     5821 tgaggcgttg aggggggatt gagatgattg ttccgctaca atttgaacat atacttcaac
     5881 ttgatgaggc cttccagaag caaggttggc cctcccgcaa agagatttta accaactatc
     5941 taagggaaca agaaaaggga gaacgtatcg ttctagttgc cgaagaagca ggagcttgca
     6001 agggctacat caccttgatt aagcaagtga aggaggggcc gttttaccaa tctggaatac
     6061 ctgaaattgc tgatttcaat gtttttgaag actttcaaaa acaggggata ggttggcaat
     6121 tattagatgc tatctgtcag cttgcctcag aattcatgga tatagtaggt attggagttg
     6181 gtttgaatgc aaattatgga aaggctcaac ggctctatgt aaaacatggt tttataccag
     6241 acggaagcgg tgtctggtac cgagggcgct ctttgccggt aggtgccaaa gcctataatg
     6301 atgatgaatt ggccttgtat tttacaaaaa agttatagag gaaaagtaaa atgaacacca
     6361 tcgacctaaa tctgcctgtt gcagagatta tcaaccagca cccagaagtc aaggagattc
     6421 tggtggagct tggtttcaaa cctttggcaa atccagccat gctgaacaca gttggcaagg
     6481 tgaccagtct gaagacaggc tccaagatga ccaagattcc gttagaccgt attcagcagg
     6541 tcttggaatg caacggatac gaggtaatag gaggagagaa atgagtgaaa aacggattga
     6601 cattttgaag aatattctaa tggatttgca caatggggcc agtccagagt ctgttcagga
     6661 ccagtttaat cagcatttca cgggagtttc tgccctcgaa atctccctaa tggagcatga
     6721 gctcatgtca agcgacacgg gcatcacctt tgaagacgtc atgagcctct gcaatatcca
     6781 cgccaatctc ttcaaaggag ccattgcaga tgtggaagtg gcggatatgg accaggaggg
     6841 gcatcctgtc tatgtcttta agcaggaaaa cctagcactg cgggcggctc tcctacgtat
     6901 ccgccgtatc cttgaccagt atgagcagac agaagatgcg gaactgcaag accagctcca
     6961 gcaaggcttg acacgccagt ttggcctcct cggtcagttt gaaaaccact atacccgtaa
     7021 ggagaaggtc ttctttccca ttatggaacg ctacggtcac gatgcaccgc ctaaggtcat
     7081 gtggggcgtg gatgacgaga ttcgcgacct cttcaagacg gctcgcaaag ctcttgcaac
     7141 aggcgaccta gctgcgacac gggtccattt tgaaaacttc gccgaggagt tcgaggagat
     7201 gattttcaag gaagaagcca tacttctcat gattctattg gagacattca ctcaggatga
     7261 ttggcttcaa gtggcagagg atagcgacgc ctacggttac gccattgtca agccgacagc
     7321 caagtgggtg cctcatcggg aggcttttgg agaaatagca gagcagacag ccgacagtct
     7381 tgctccacag ccagatgggt caaaccagca gataattgat acgcctgaag gtcagtttac
     7441 cattaccttc aaaccgaagg agaagtcgga aactattcag gacaggacca gtccgcagac
     7501 ctttggcaat ggttatttgt ctgttgagca ggctaatctc attctcaacc atttaccgct
     7561 agaactcacc tttgtcaaca aggatgacat tttccaatat tataatgaca gccatcctgt
     7621 tgaagatatg attttcaaac gtactccgag ccagattgga cgtcatgtgg agctctgcca
     7681 tccacccaaa atcttagaca aggtcaagaa gatttttgaa ctgctccgca cgggacaaaa
     7741 agaccaggtg accatgtggt tcaagtccga gagcatgggc aagtttgtct atgtggtcta
     7801 taaggccgtg cgtgatgacc agggagagtt tcagggcgtc ttggaatacg tccaaaatat
     7861 ccaaccattt tttgaaattg acagcgattt tcatcgggaa atttaaaggt caccagtgga
     7921 tgatagagga aaatagagga ttttttatga aaaatttgaa agaaaaaaag aatcaaggaa
     7981 cagttattcc gcttggaata gccagtttta gtttgttaat gggagtgtcg ttattactgt
     8041 ttgcaggaac agcaggtgga ctgaatatta ttttatctat accgccttta atcgtagctg
     8101 gtcttggatt tttctatgtc aagtatcgta gggaaacaac aattaagatg tacaataaaa
     8161 tgtatgacag gtacccagaa ttacagaata atttgcaatt attagttgac aaggcagatt
     8221 attatgattc tgcaataggg atagtcgttt ataagcatct cattgttagc ctcaaagatg
     8281 gtattaaggt tttccatctc gatgaagtta tatggcttta cctccatata ttaaggggcg
     8341 gctttgcctc aatttattct cagactttaa tggtcggtac agttttgaat gatcgccata
     8401 ccttgttgag cttaccaatt ttaggtactt ccagagttgc agaccctaat atagaaaagt
     8461 tatttgaatt tatcggtgcc agacatccta aaattatgtt agggtatacc aatgaaaata
     8521 accaattttg gggtgttctt aggagcgagg ataagaacca aaaaacagac tattttgatt
     8581 ttttacgatg agtgattgtt accggaccgc ccacaagagc ggtcctttgt gttataatga
     8641 aaacatgatt tcaggaatta ttaatttaaa aaaagaggcg gggatgacct cgcatgatgc
     8701 agtttttaaa ctccgaaaga ttctgcagga gaagaagatt ggacacggtg ggacgctaga
     8761 tccagatgtg actggggttc tgccaattgc agtcggcaag gctactcgta tgattgagtt
     8821 catgcaggat gaggggaaaa tctacgaggg ggagattacc attggctact cgaccacgac
     8881 agaagatgca tctggcgacc ttgttgagcg gacaccggtt ttggacatag cagagcaggt
     8941 agttgatgag gctatggcta gttttgtcgg tactattacc cagattccgc ctatgtattc
     9001 cgccgtcaaa gtaaatggcc gcaagctcta tgagtacgca cgagcgggtg aagaagtcga
     9061 acgtccccaa cgccaaattg acatatatag ttttgaacgt accagtccta ttgaattggc
     9121 agatgactgt gctcggttta ccttccgagt tcgttgtgga aagggcacct atgtccgtac
     9181 tctttctgtt gacttagggg ctaagttagg ctacgccagc cacatgtcta agttggaacg
     9241 aactggttca gctggaatgg acctatcgga cgccttgact ttagaagaaa tttcttcgct
     9301 ggtagctgaa aatgattttt catttctcca acctattgaa cgtggtatcg gggatttacc
     9361 tgttgtagaa ttgaaagaag agcaggtgca agatgctaca tttggtcgat ttgtagaatt
     9421 gaatgcagaa gcagagcgct tagcaggctt tcatgatggt cagttgattg ctatttttga
     9481 aaaacgcgac cagctgtata aaccgagcaa ggttttggtc taagaaattt ctcaataact
     9541 gtgataaaat agaaaacatg aacattagaa caattaaaca ttatagtgaa ttgaatcaag
     9601 aggagccgac ggttttagta ctaggctact ttgatgggat tcatcttggg cacaaggctt
     9661 tacttgatcg agcaagaaaa gtagcagatg agcaaggttt gacagtaact gttctgacct
     9721 ttccagagtc acctcggttg gctttttctc gctttagccc agaactttta ctgcatttga
     9781 ctagtcaaga gcaacgctac ctcttattga aaaaatatgg tgttgataat cttattttga
     9841 ctgattttac tagtgaattt gctaataata ctcctcagca gtttttggat cgctatatca
     9901 aaggtctcaa tgcccagatt ttggtcgcag gtttcgacta tcattttgga aattgcagag
     9961 cagatgtgac agacttgaca gccttgtttg acgggcaagt tgaaattgtt gaagaagtct
    10021 gcctagatgg tgaaaaggta tcatctaccc gtatccgaca agctattcaa gcaggaaatg
    10081 ttgaattagc caatcgtctg ttaggttata cttttatgac agaaggtatt gttgttcatg
    10141 gagatgccag agggcgcact attggttatc caactgcaaa tttagctcct tttgaccgtg
    10201 tccatttacc atctgaggga gtctacgtcg ctgatgttga agtagatgga aaacgctatc
    10261 gagctatgac aagcgttggg aaaaatgtga cctttgatgg agcggagatg cggatagaag
    10321 cccatatttt cgggtttgac cgctttatct acggagaaaa aataactatt ttttggcttg
    10381 aaaaaattcg agatatggtc aaatttgatg ggattgaagg tttgatggag cagatgaaat
    10441 ctgatgagga atttgccttg caatggggga aatatgctta aacgattgat tcgtcatcct
    10501 ttttatgaga aggctatgac ctacatagct gtagtctatg tatttcttat cgtacttgaa
    10561 ttgatggatg ctagtattgc taattctagt gggtatcggg tactagactt gctcttatgg
    10621 tttgtttttg tctgcgatta ttttgctcag ctttattatg cggatgacat acttgaatat
    10681 gtacagggcc atatcttgga attaattgcc attattccat ttgattcatt cttcagtttt
    10741 cttcgcttgg gaagacttgc acgactcttc agattggtca aagtaacgag aatatttgcc
    10801 ctgtctaatc gattctggga tacaatcaac aagcttttgc ataccaacag tttatccaaa
    10861 gtgttgatgt taaacatctc agcggtgcta gttgcaagtg tcttattatc agtgattgaa
    10921 gggaaatcat tcttcgatgc actttggtgg tccattgtaa cgatgacaac tgtagggtac
    10981 ggagatattg tcccccaaga tacgatttct aaaattatag ccatcctctt gatgttggtt
    11041 ggtatttgta cttttggtat ggttacctcc acgataactc gttttttctc tgaaacagag
    11101 cgtgaaacga agttggatac cttgatggca aaaattgatg aacaaaacga aatattgcta
    11161 cgcttagaga aaaaaataga atctttggaa aaattacagg gaagagatta gatttactat
    11221 tgaaaactct tttaagttag agtataatat aagaagaaaa atgtttttag aggggatgga
    11281 agacatgatt actttatttt tgtcaccgag ttgtaccagt tgtcgtaaag ctcgtgcttg
    11341 gctgacaagt cacgaagtcc cttttattga gcacaatatt atgactagcc ctctaactgc
    11401 tgaggaattg aagaacattt tagcattgac agaaaatggg acagatgatt tgatttctac
    11461 ccgttcaaaa gtttttcaga agctagatat tgatgttgat gagctttctg tgaagcaact
    11521 tattggatta attgaaacct atccgagtct cttacgacgt ccgattattt tggacgaaaa
    11581 acggatgcag attggtttta acgaagatga aattcgtgca tttcttccgc gaaagtaccg
    11641 caaacaagaa ttgagaaatg ccacattacg agcagaaata ggataaaaga tatgaacaaa
    11701 aattattcat atccacttga tttttcgtgg agcacagagg agatttcctc cgtgctttct
    11761 tttttgaatc aggtggaggc agcttatgaa aaaggagcag atgcggtagc tatattagct
    11821 agttataaaa acttcaaaga tgttgttaaa agtaagggac aggaacgtca aattgatc
//
LOCUS       DBNFCX010000071        11605 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.071, whole genome shotgun sequence.
ACCESSION   DBNFCX010000071 DBNFCX010000000
VERSION     DBNFCX010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 11605)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11605)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11605
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.071"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(29..1111)
                     /locus_tag="AC1PJC_001661"
     CDS             complement(29..1111)
                     /locus_tag="AC1PJC_001661"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 protein"
                     /protein_id="HIP6620642.1"
                     /translation="MLGLFFLGDRTQKEQTKVATTSSSQEISARDKVIVNYLNQMTLE
                     EKVGQMIFARMPSAGQTEALETYHFGGYILFASDFEGKTLEQVKEEIASYQSLSKVPL
                     LMASDEEGGTVTRISQLLETPFASPLELYQAGGIEAILSDAKQKTSLLKEEGIYAGFF
                     PVADLSTDPSSFIYDRTIGQDAKTTADYIGQLVKLLKKEQFTLTLKHFPGYGDNADSH
                     TDLVYDNRSLEELRANDFLPFKAGIEAGADSIMVSHNIVPAIDDVPSSISPEINKILR
                     NELGFEGVIMTDDFDMQGLVQFVDQDTGALQTIQAGTDMILSSSYASQIPYIIEQVKA
                     ETITEERIDQSVKRILGMKYDLGLIK"
     gene            complement(1192..1983)
                     /gene="pflA"
                     /locus_tag="AC1PJC_001662"
     CDS             complement(1192..1983)
                     /gene="pflA"
                     /locus_tag="AC1PJC_001662"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043365 -
                     [formate-C-acetyltransferase]-activating enzyme activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate-lyase-activating protein"
                     /protein_id="HIP6620643.1"
                     /translation="MMTEIDYRKVTGLVHSTESFGSVDGPGVRFVVFMQGCHMRCQYC
                     HNPDTWDLVNPAATERTAEDVLNEALRFRMFWGKEGGITVSGGEATIQIDFLIALFTL
                     AKEKGIHTTLDTCALTFRKTERYLEKYSRLMEVTDLVLLDIKEMNPEQHRIVTGHSNK
                     TILECAQYLSDIGKPVWIRHVLVPNLTDRDEDLIELGKFVKTLKNVERFEVLPYHNLG
                     EFKWRELGRPYPLEGTKPPTKARVENAKALMETETYQEYLNRIKG"
     gene            complement(2104..3441)
                     /locus_tag="AC1PJC_001663"
     CDS             complement(2104..3441)
                     /locus_tag="AC1PJC_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HIP6620644.1"
                     /translation="MEDPGSQTIYLQLLILFLLTLFNAFFSASEMALVSLNRSRVEQK
                     AADGEKKYIRLLQVLENPNNFLSTIQVGITFISILSGASLANDLGAVFAKWMGNSTTA
                     QTAGYWLALAMLTFVSIVLGELYPKRIAMNMKENLAVVTAPVIIFLGKIVSPFVWLLS
                     AATNLISRITPMNFDDADEQMTRDEIEYILTKSEKTLDAEEIEMLQGVFSLDELMARE
                     VMVPRTDAFMVDIEDDTATIMAAILKQNFSRIPVYDGDKDNIIGLIHTKKILSEAFSN
                     GFDNLNIRRIMQEPLFVPETIFVDDLLTSLRNTQNQMAILLDEYGGVAGLVTLEDLLE
                     EIVGEIDDETDKTEIFVREIADNTYIVQGNMTLNDFNEHFEMELESDNVDTIAGYYLT
                     GVGTIPSQDEKVSFEVDSKDHHLVLINDKVKNGRVTKLKLLITPLEKEETDKD"
     gene            3574..4353
                     /locus_tag="AC1PJC_001664"
     CDS             3574..4353
                     /locus_tag="AC1PJC_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6620645.1"
                     /translation="MIISMKNVHYKRQGKTILEDINWEFRKGERWAILGLNGAGKSTL
                     LRILMAEFWKTSGDLTVLGVEFGKGDIPSLRTKIGVVGSFLAERFPIDLTAEQIVLTG
                     KYKSSILYREYGQTELDEAIDMLKTIKAEHLIGRTYASLSQGERQLLLIARSLMEEPA
                     ILILDEATVGLDLLARERLLHHIDYICQLPTAPAIIYVTHHAEEITDNFTHVLLLKDG
                     MVLAQGPKEDILTPELLSDFYGNQVELIDLGEGRLFIKPIL"
     gene            complement(4369..4923)
                     /locus_tag="AC1PJC_001665"
     CDS             complement(4369..4923)
                     /locus_tag="AC1PJC_001665"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004808 - tRNA
                     (5-methylaminomethyl-2-thiouridylate)(34)-
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (mnm(5)s(2)U34)-methyltransferase"
                     /protein_id="HIP6620646.1"
                     /translation="MLRPLHMAHAFLDEILTDQDLAVDATMGNGHDTLFLAQRAGKVV
                     AFDIQEQALTTTAEKLEKAGLTNAQLVLTGHENLDQYVEECKAAIFNLGYLPSADKSV
                     ITLPATTLQAIEKVLDRLVVGGRLAIMIYYGHEGGAVEKDAVLDFVRQLDQTVFTAML
                     YKPLNQVNTPPFLVMVERLKSSSN"
     gene            complement(4933..5451)
                     /locus_tag="AC1PJC_001666"
     CDS             complement(4933..5451)
                     /locus_tag="AC1PJC_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HIP6620647.1"
                     /translation="MDRRIAKTKRAIFQAFLTLLNDKGYDEMRVQDVIDLADVGRSTF
                     YAHYASKEALLEELCHDLFHHLFTGREDADVKTLLVHIFKHFRTNQDRVASLLLSRNA
                     YFLRELEAELKHDIFPKVAEDYMQDKRNLPEDLLVHFVVTTFVETVSWWLQQRKKVDE
                     ATLTEYYVRLLA"
     gene            5573..6391
                     /locus_tag="AC1PJC_001667"
     CDS             5573..6391
                     /locus_tag="AC1PJC_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HIP6620648.1"
                     /translation="MSSSKNTFIAFLLNLSFSIIEFIFGWLFGSSAILADAVHDLGDA
                     LAIGSSAIMQTYANKPADRVYPFGYKRWNILAALLTSSILIIGSSLILVENIPNLFHP
                     QPVNQDGMLVLGIIAVIINFLASRIVKNGHSHNESILSLHFLEDILGWLAVILVSIIL
                     QFTDWYFLDPLLSLCIAIFILAKALPKAWNNVKILLETSPQGVNLEEVKGVLLALENV
                     HEITQLNVWTMDGYDHCATVTVTLTNPAVADKTKAKIRNSLITFGIIQSTIEIL"
     gene            6445..7089
                     /locus_tag="AC1PJC_001668"
     CDS             6445..7089
                     /locus_tag="AC1PJC_001668"
                     /EC_number="3.4.23.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HIP6620649.1"
                     /translation="MKTIILFFLGASIGSFLGLVIDRFPEQSIISPSSHCNACKRRLK
                     AWDLIPILSQLSTKSKCRYCKAKIPYWYLGLEVLAGLVVLLCHFQVLNLTETILSLAG
                     LVLTIYDIKHQEYPFAVWLVFTFIALVLSQLNWLFCGFLLLAYLTEKWQINIGSGDFL
                     YLASLALICGFTELLWIIQISSLLGLLVFAIFKPKSIPYVPLLFLSSIPIILCI"
     gene            7197..8657
                     /locus_tag="AC1PJC_001669"
     CDS             7197..8657
                     /locus_tag="AC1PJC_001669"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004516 - nicotinate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HIP6620650.1"
                     /translation="MTLFKDDSLTLHTDLYQINMMQVYFDQNIHNKHAVFEVYFRSQP
                     FKNGYAVFAGLERVVNYLNNLSFSQTDIDYLTELGYPQDFLDYLSQLEMTLTVRSAKE
                     GDLVYANEPILQIEGPLAQCQLIETALLNIVNYQTLIATKARRIKAVIEDEPLMEFGT
                     RRAQEMDAAIWGTRAAFIGGASATSNVRAGKIFGIPVAGTHAHALVQTYGDDYKAFKA
                     YAETHHDCVFLVDTYDTLRIGVPAAIKVAKEMGDKINFKGVRIDSGDMAYISKKVRQQ
                     LDDAGFTGAKIYASNDLDENTILNLKMQKAKIDVWGVGTKLITAYDQPALGAVYKIVS
                     IEDEDGNMRDTIKLSSNAEKVSTPGKKQVWRITSKEKGKSEGDYITFADTDVTQMDNI
                     YMFHPTYTYINKTIENFDARPLLVPIFEKGKQVYELPSLAEIQTYANQEFDKLWDEYK
                     RVLNPQLYPVDLAQDVWDNKMNLINRIRKQTQTKSI"
     gene            8670..9494
                     /gene="nadE"
                     /locus_tag="AC1PJC_001670"
     CDS             8670..9494
                     /gene="nadE"
                     /locus_tag="AC1PJC_001670"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000058066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003952 - NAD+ synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0004359 - glutaminase activity [Evidence
                     IEA];
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-dependent NAD(+) synthetase"
                     /protein_id="HIP6620651.1"
                     /translation="MTLQETIIKELGVKPSIDPKEEIRRSIDFLKDYLKKHPFLKTYV
                     LGISGGQDSTLAGRLAQLTMEEMRAETGDDSYQFIAIRLPYGVQADESDAQAALAFIQ
                     PDVSLTINIKESTDAMVAAVNANGLAMSDFNKGNAKARMRMIAQYAVAGERKGAVIGT
                     DHAAENITGFFTKHGDGGTDILPLFRLNKRQGKQLLAELGADEKLYLKVPTADLEEDK
                     PGLADEVALGVTYNQIDDYLEGKTIDPQAQTIIEGWWNKTAHKRHLPITIFDDFWK"
     gene            complement(9748..10923)
                     /gene="trpB"
                     /locus_tag="AC1PJC_001671"
     CDS             complement(9748..10923)
                     /gene="trpB"
                     /locus_tag="AC1PJC_001671"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - L-tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HIP6620652.1"
                     /translation="MTEKGYFGQFGGSFVPEQIQVLLDQLEETFEQYRNDPEFLAEYQ
                     AYLKDYAGRETPLYFAESLTKELGGAKIYLKREDLNHLGSHKLNNVLGQILLAKRMGK
                     TRVIAETGAGQHGVATAAVAARFGLGCDVYMGAEDVKRQRLNVFRMEMMGARVHAVTN
                     GTQTLKEAVDAAFGAWMADLDAFYVLGSAVGPHPYPTIVHEFQKIISVESRRQILEKE
                     GRLPDYVIACVGGGSNAIGAFSQYLPDESVKLIGVEAAGKGVDTELHAATMTKGTVGV
                     VDGMKTISLFDENGGVAPVYSISAGLDYPGVGPEHAHYKETGRVNYVAATDDEAVNAL
                     LTLSRTEGILPAIESSHAIAEAIRLAPQLDKDKIIIINVSGRGDKDVAAIADYLESR"
BASE COUNT         3337 a         2768 c         2197 g         3303 t
ORIGIN      
        1 gaagtacaga gtacttcctt ttctttgttt atttgattaa gccaagatca tatttcattc
       61 ccaaaatccg tttgacggat tggtcaatcc gctcctctgt tatagtttca gcctttactt
      121 gctcgataat ataaggaatt tgactggcat aacttgaaga caaaatcata tctgtcccag
      181 cttgaatggt ctgcaaggct cctgtatctt gatctacaaa ttggaccaag ccctgcatat
      241 caaaatcatc cgtcattatg acaccctcaa aaccaagctc attccgaagg attttattga
      301 tttcaggtga aatggatgat gggacatcat caatggcagg tacgatattg tgactgacca
      361 taatggaatc agctcctgct tcaataccag ccttaaacgg aagaaaatca ttagcccgta
      421 attcttctaa actacgattg tcatagacca aatccgtatg cgaatctgca ttgtccccat
      481 aacccgggaa atgtttcaaa gtcaaagtaa actgttcttt ctttaacaat ttgaccaatt
      541 gaccaatata gtctgcggtg gttttcgcat cctgtccaat ggtcctatcg tagataaaag
      601 atgatggatc ggtggataaa tccgcaactg ggaagaagcc tgcatagatt ccctcttcct
      661 ttaaaagact ggtcttctgc ttggcgtccg acaaaatcgc ctcaatgccg ccagcttggt
      721 acagttccaa gggtgatgca aaaggtgttt ccagaagttg actaatccgg gttaccgtcc
      781 caccttcctc atctgaagcc attaatagcg gtacttttga aagtgattga taagaagcaa
      841 tctcttcttt aacctgctcc agtgtcttac cttcaaaatc acttgcaaat aagatatagc
      901 ccccaaaatg ataggtttcc aatgcctcag tttgtcctgc agatggcatt cgagcaaaga
      961 tcatctgtcc gaccttttct tctaaggtca tctgatttag ataatttaca atcactttgt
     1021 ccctagcaga tatttcttgg ctagatgatg tcgttgcaac cttggtttgc tccttttgtg
     1081 ttcgatctcc caaaaagaac aagcctagca taagcccaat aaacaagaga caagtgatac
     1141 ttgtccctaa cacattaaat ctttttcgca gcaatctcag acctctcact attatccctt
     1201 aattctattc aagtactcct gataggtctc tgtctccatc aaagcctttg cattttccac
     1261 tcgagccttc gttgggggct tggtcccctc tagtggatag ggtctgccca actcacgcca
     1321 cttaaattca ccaagattgt gataaggtaa cacctcaaaa cgttcgacat tttttaatgt
     1381 tttaacaaac ttaccaagtt caatcaagtc ctcatctcgg tcagtcaaat tcggtaccag
     1441 gacatgacga atccaaacag gcttaccaat gtctgataga tattgagcac attctaaaat
     1501 agtcttgtta ctatgacctg tcacaatgcg gtgttgctca ggattcattt ccttaatatc
     1561 aaggagcacc aaatctgtta cttccataag ccgactatat ttttccaagt aacgctctgt
     1621 cttacggaaa gtcaacgcac aggtatccaa agtagtgtga atcccttttt cttttgcaag
     1681 ggtaaacaaa gcaattaaaa aatcaatctg gatggttgct tcaccacctg aaacggtaat
     1741 acccccttct tttccccaaa acatacgaaa acgcagggct tcattcaaga catcttctgc
     1801 cgttctctca gtcgctgctg gattgaccag atcccaagta tctgggttat ggcaatactg
     1861 gcaacgcatg tgacagccct gcataaagac tacaaaacgt acccctgggc catcaaccga
     1921 accaaaactc tctgttgaat gaaccaaacc tgtcacttta cgataatcaa tttctgtcat
     1981 catctcatcc tcatcatttt ataagactag tatatcacaa aaatgaaaac gcttctatca
     2041 tttactttct ttctttcata actatcatct tccgtaaaaa gaaagctaaa agactaggtt
     2101 gccctagtcc ttatcggttt cttctttctc cagtggtgta atcaagagtt ttaattttgt
     2161 tacgcgacca ttttttacct tatcgttaat aagaaccagg tggtgatctt tactatccac
     2221 ttcaaaggaa actttctcgt cttggctcgg aatggtaccg actcctgtca gataataacc
     2281 agcaatcgta tcaacgttat cactttccaa ctccatctca aaatgctcat tgaagtcatt
     2341 taaggtcata tttccttgga cgatataggt gttgtcagca atttctcgga caaaaatttc
     2401 tgtcttatcg gtctcatcat cgatttcccc gacaatttct tccagcaaat cttccaaggt
     2461 aacgagacct gcaactccac catactcatc taacaagatg gccatttgat tttgggtatt
     2521 tctcaatgat gtcaacaaat catccacgaa aatcgtttct ggaacgaaga gaggctcctg
     2581 cataatgcgg cggatgttaa gattgtcaaa gccattactg aaagcttctg acaagatttt
     2641 cttggtatga atcagaccaa tgatattgtc cttatcgcca tcataaacag ggatacgtga
     2701 aaaattctgc ttgaggatgg ctgccatgat ggttgctgta tcatcctcaa tatccaccat
     2761 gaaagcatcc gtacggggaa ccattacttc acgtgccatc agctcatcta aagagaacac
     2821 accttgaagc atttcaattt cttcggcatc taaggttttc tcactctttg tcaaaatata
     2881 ttcaatttca tcccgtgtca tctgctcatc cgcatcatca aaattcatag gagtaatacg
     2941 gctgataaga ttcgttgcag ctgataataa ccacacgaac ggactcacaa tttttccaag
     3001 gaaaataatc acaggtgcag tgactactgc cagattttcc ttcatattca tggcaatccg
     3061 cttagggtac aattcaccaa gaacgattga aacgaaagtc aacatagcca gtgcaagcca
     3121 gtatcctgca gtttgcgctg ttgttgaatt ccccatccat ttggcaaata cagctcccaa
     3181 atcattagcc aagctggcac ctgaaaggat agagatgaag gtaattccaa cctgaatggt
     3241 tgatagaaaa ttgttaggat tttctaaaac ttgaagcaag cgaatatatt tcttctcacc
     3301 gtctgcggcc ttttgttcta ctcttgaacg atttagagaa acaagcgcca tttcagaggc
     3361 tgaaaagaag gcattgaaca gggtcaataa gaataaaatt aacagttgta aatagatggt
     3421 ctgactacca gggtcttcca tgatgttctc ctataataaa atttataaca tttccattat
     3481 accataaatt ctaaaaatta acatatttct tgttataaat agtccctcat gtctgtttat
     3541 gttacaataa tcaaaaggaa taggagaaca actatgatta tttcgatgaa gaatgtccac
     3601 tataaacgac aaggtaaaac tattttagaa gacatcaact gggaatttag aaagggagag
     3661 cgttgggcta ttttagggct aaatggtgct ggaaagtcaa ccctccttcg cattttaatg
     3721 gctgagtttt ggaagacctc tggtgacctg actgttcttg gagtggagtt tggtaaggga
     3781 gatattccta gccttcgcac taagattggg gtcgttggtt cctttctagc cgaacgattt
     3841 cctattgatt tgacagctga gcagattgtc ctgactggaa agtacaaatc ctccatcctc
     3901 taccgtgaat acggtcaaac tgaattggat gaagccatag acatgctcaa aaccattaag
     3961 gctgaacact tgattggtcg gacctatgct agtttgtcac agggcgaacg ccaactcctg
     4021 ctcattgccc gcagtttgat ggaagagcca gctattttga ttttggacga ggctactgtg
     4081 ggcttagacc ttttggctcg cgaacgcctg ctccaccaca tcgactatat ctgccaactc
     4141 ccaacggctc ctgccattat ctacgtcacc catcacgccg aagaaatcac tgataatttc
     4201 acccatgtcc tcctgctcaa agatggcatg gtcttggcac agggacccaa agaagacatc
     4261 ctgacacctg aactcctcag cgatttttat ggcaatcagg tggaattgat tgacttgggt
     4321 gagggaagat tgttcattaa gccgatatta taaaaaacaa atccagccct agtttgagct
     4381 ggattttaat cgttccacca tgaccaaaaa tggtggggta ttgacttggt tgagcggttt
     4441 gtagagcatg gcggtaaaga cggtctggtc tagctgtctg acaaagtcta agacagcatc
     4501 cttctcaacc gccccaccct catgtccata ataaatcatg atggctaggc ggccaccaac
     4561 caccagacgg tcaagaactt tttcaatagc ttgaagggtg gttgcaggca gggtgatgac
     4621 tgacttatcc gccgaaggaa gatagcccag attgaaaatg gctgccttgc actcctccac
     4681 atactggtct aggttttcgt gtcctgtcaa aaccaattgg gcattggtca agccagcttt
     4741 ttctagtttt tcagccgttg tggtcagggc ttgttcctga atatcaaagg ccaccacttt
     4801 tcctgctcgc tgggctaaaa atagcgtgtc atgcccattt cccatagtcg catcgaccgc
     4861 taggtcctga tctgttaata tctcatctaa aaaggcatga gccatgtgta aaggtctaag
     4921 cattttctct ccttaagcta ataatcttac ataatattcg gtcaaggtgg cttcgtccac
     4981 ctttttgcgt tgctggagcc accagctgac cgtctccaca aaagtcgtca cgacaaaatg
     5041 taccagcaaa tcctctggaa gatttctctt atcctgcatg taatcttcag ccacttttgg
     5101 aaaaatgtcg tgtttcaact ccgcttccag ctctcttaga aaataggcat tgcgggacaa
     5161 caaaaggctg gcaacacgat cttgattggt ccgaaagtgt ttgaaaatat gaaccaataa
     5221 ggtcttcaca tccgcatctt cacgacctgt aaataagtgg tgaaagaggt catgacaaag
     5281 ttcttccaaa agagcctctt tacttgcata gtgggcatag aaagtggaac gccccacatc
     5341 tgccaggtca atgacatcct gcacgcgcat ctcgtcatag cccttatcat ttaataaggt
     5401 caaaaaagcc tgaaaaatag ccctttttgt ttttgcaatt cgtctatcca tttttcgtac
     5461 atttcaaaca atttgttcag aaaaagacaa accgtttctc ttatttctag tttttcggct
     5521 cattacagtg cataataaac ctataaacag tataacacag aaagggaatc tcatgtcatc
     5581 ttctaaaaat acatttatcg cttttcttct caatcttagc ttttctatca tcgagtttat
     5641 ctttggctgg ctctttggtt ctagcgccat cttagcagat gctgttcacg atttgggtga
     5701 cgccctcgcc atcggaagct ctgccatcat gcaaacctat gccaacaagc ctgctgatag
     5761 ggtttatccc tttggctaca agagatggaa tattttggcc gctctcttga cttctagcat
     5821 tctgattatc ggctccagct tgatccttgt ggaaaacatt cccaatctct tccatcccca
     5881 gcctgtcaat caagatggta tgctggtact tgggattatc gctgtcatca tcaatttcct
     5941 tgcttcccgt attgtaaaaa atggccatag ccataatgag tccattctca gcttgcactt
     6001 tttagaggat attttgggat ggctggcggt cattcttgtt tccatcattc ttcaatttac
     6061 tgattggtac tttctagacc cacttctctc gctctgtatt gctatcttca tcctcgccaa
     6121 agccttgcca aaagcctgga acaatgtcaa gattctactt gaaacaagtc cgcaaggagt
     6181 aaatcttgaa gaagtgaaag gagtcctcct ggctcttgaa aatgttcacg aaatcactca
     6241 actgaatgtc tggaccatgg atggatatga ccattgtgcg actgtgacgg tgacactaac
     6301 aaatcctgct gtagcagaca agaccaaagc aaaaatacgg aattctctta tcacctttgg
     6361 cattatccag agcaccatcg aaattttgta aaaaattttt aaaaaaactt cacattttcc
     6421 tcacccattt gcgaataaat aggtatgaag acaattatcc tatttttcct tggagcttct
     6481 atcggctcct tcttgggatt ggtcatcgac cgtttccctg aacagtccat tatctccccc
     6541 tccagtcact gcaatgcctg caagcgacga ctcaaggcct gggacctaat acccatcctg
     6601 tcccagcttt cgacaaaatc caaatgccgt tactgcaagg cgaagatacc ttattggtat
     6661 ctgggactag aagtcttagc tggtctagtc gtcctgctct gccattttca agtcctaaac
     6721 ctaaccgaaa ccattctcag cttagcaggg ctagttttaa ccatttacga catcaagcat
     6781 caggaatatc cttttgctgt ctggctcgtt tttactttta tagctctggt actctcccag
     6841 ctcaactggc ttttctgtgg ctttttactc ttggcctatc taaccgaaaa atggcagatt
     6901 aatattggtt ctggtgattt tctctatctg gcaagtttgg ccttaatatg tggatttaca
     6961 gaactcctct ggattatcca gattagttcc ctcctagggc ttcttgtctt cgccattttc
     7021 aaacccaagt ctattcccta cgtaccactc ctttttcttt caagtattcc tatcattctg
     7081 tgcatctaaa tcgagttttt ctcgattttt ttgttataat agaaggcata ttagagttca
     7141 actccatcaa aataattgga gtgccttctt gatcggaagg caaaaggaga aacgttatga
     7201 cactatttaa ggatgacagt ttaaccctgc ataccgacct ttatcaaatc aacatgatgc
     7261 aggtctattt tgaccaaaac atccacaata aacacgctgt attcgaagtc tatttccgtt
     7321 cacaaccttt taaaaatggc tatgctgtat ttgccggttt ggaacgcgtt gtaaactacc
     7381 tcaacaatct cagctttagc cagacagaca ttgactatct gacagaacta ggttatccgc
     7441 aggatttcct tgattacttg tcccaattgg aaatgactct cactgtccgt tcggctaagg
     7501 agggcgacct agtctacgct aacgaaccca ttcttcaaat cgaaggacca ttggcacaat
     7561 gccaactaat cgaaactgcc ctcttaaaca tcgtcaatta ccaaacccta attgccacaa
     7621 aagctcgccg tatcaaggct gtcattgaag atgagccctt gatggaattt ggcactcgcc
     7681 gtgcccaaga aatggatgct gctatctggg gtacacgggc agcctttatt ggtggagcat
     7741 ctgcgacttc caatgttcga gctggcaaaa tcttcggcat ccctgtcgct ggtacccatg
     7801 cccacgcctt ggttcaaaca tacggagatg attataaggc tttcaaagcc tacgctgaaa
     7861 cccatcatga ctgtgtcttc ctcgttgata cctatgatac gcttcgtatt ggtgttccag
     7921 cagccatcaa ggttgccaaa gaaatgggag ataagattaa cttcaaaggg gttcggattg
     7981 attcaggcga tatggcctat atttccaaga aagttcgtca gcaattagat gatgcaggtt
     8041 ttacaggtgc gaagatttac gcatctaatg acctggatga aaataccatc ctcaacctca
     8101 aaatgcaaaa ggcaaaaatt gatgtctggg gagttggtac caaactcatc accgcctacg
     8161 accaaccagc tctgggcgct gtctacaaaa ttgtatccat cgaagatgaa gatggaaata
     8221 tgcgtgacac catcaagctg tcttctaatg cggaaaaagt ctccactcct ggtaagaaac
     8281 aggtttggcg catcacctcc aaagaaaaag gaaaatcaga aggggactac atcacctttg
     8341 cggacactga cgtcacacag atggataata tctatatgtt ccatccaacc tacacctaca
     8401 tcaataaaac catcgagaac tttgatgcac gtcctctcct agttcctatt ttcgaaaaag
     8461 gaaaacaggt ctatgaactt ccaagcctag cggaaattca aacctatgcc aatcaagaat
     8521 ttgataaact ctgggatgaa tacaaacgtg ttctcaaccc acagctctat ccagtcgact
     8581 tggcacaaga tgtttgggat aataagatga acctcatcaa tcgtattcgc aaacaaactc
     8641 agaccaaatc catctaagaa aggtatgtta tgaccctaca ggaaacaatc atcaaagaat
     8701 taggtgtcaa gccaagcatt gaccccaaag aagaaatccg tcgctccatc gactttctca
     8761 aagattacct gaaaaaacac ccatttttga aaacctatgt cttgggaatt tcgggtggac
     8821 aagactcgac cttggctggt cgtttggccc agctgactat ggaagaaatg cgggcggaaa
     8881 caggtgacga ttcttatcaa tttatcgcta tccgcctgcc ttacggtgtg caagctgacg
     8941 agtccgacgc ccaagcagcc ctagccttta ttcaaccaga tgtcagctta accatcaaca
     9001 tcaaggaatc aacagatgcc atggtggcgg ctgtcaatgc aaatgggctt gctatgtctg
     9061 attttaataa gggaaatgct aaagcccgca tgcgcatgat tgcccaatac gcagttgctg
     9121 gggaacgcaa gggagctgtc attggaaccg accatgccgc tgaaaatatc actggcttct
     9181 ttaccaagca cggcgacggc ggtacagaca tcctgcccct tttccgcctc aacaaacgcc
     9241 aaggaaagca gcttctagct gaactggggg cagatgaaaa actctacctc aaagttccta
     9301 ctgcggactt ggaagaagac aagccaggtc tggctgatga agtcgcactt ggtgtaacct
     9361 ataaccaaat cgacgactat cttgaaggca aaaccatcga ccctcaagcc caaaccatta
     9421 tcgaaggatg gtggaacaaa acagcccaca aacgccatct gccaatcacg atttttgatg
     9481 acttttggaa ataatactct tcgaaaatca aaatcagacg ttgttgactt gatttgatga
     9541 ctgaaaagct cctgtggagg ttttcagcct gttcccttga aatataaaag gaacagtgtt
     9601 ctatctacat cgtatcgata cgaactaggt tcgctctatc tccaacctcc aaaggttccc
     9661 caaacctttg gagcaagtct gattttgatt ttcattgagt ataaaaatta tcccctgacg
     9721 ataggcacaa ccgtcagggg atttctttta tctactctcc aaataatccg caatcgctgc
     9781 gacatccttg tctcctcgac cggaaacatt gataataatg attttatctt tatctagttg
     9841 tggtgctaat cgaatagctt ctgcaatcgc atgagacgat tcaatggctg gaagaattcc
     9901 ttctgtgcga cttaaggtca gaagggcatt aacagcctca tcatctgttg ctgcgacata
     9961 attaacacga ccagtttcct tatagtgggc atgttctggt ccaacgcctg gatagtccaa
    10021 ccctgctgaa atggaataaa caggtgcaac tccaccattt tcatcaaaga gggagatcgt
    10081 cttcatacca tcaaccacac caactgttcc cttagtcata gtcgccgcat gtagttctgt
    10141 atcaacacct ttaccagcag cttctacacc gataagcttg actgactcat ctggtaaata
    10201 ttgagaaaat gcaccgatgg cattggaacc gccacccaca caggcaatga cataatctgg
    10261 caagcgacct tctttttcca aaatctgacg acgagattca acactgatta tcttctggaa
    10321 ttcatgaaca atcgtcggat aaggatgagg accgactgct gatcccaaaa catagaaggc
    10381 atccaaatca gccatccatg caccgaaggc tgcatcaact gcctctttca aggtttgcgt
    10441 tccattcgtt acagcatgaa cacgcgcccc catcatctcc attcgaaaaa cattgaggcg
    10501 ttggcgtttg acatcttcag ctcccatata gacatcacag cccaaaccaa agcgggcagc
    10561 tacagcagcc gtcgcaaccc catgttgacc agcaccagtt tctgcaatca ctcgagtttt
    10621 ccccattctt tttgccaaca gaatttgccc cagcacattg tttaacttat gagaacctaa
    10681 gtgattcaaa tcttcccgtt tgagatagat tttcgctcca ccaagctcct tggtcaatga
    10741 ttccgcaaaa tacaatggcg tttcacgacc tgcataatct ttcagataag cttggtattc
    10801 cgccaaaaat tctggatcat tgcggtactg ttcaaacgtt tcctccaact gatccaacaa
    10861 aacctgaatt tgctctggta caaaactacc accaaactgt ccaaaataac ctttttctgt
    10921 catataattc cctctttcaa cattcgctac aagagaccaa taaggtcaag agtttaatac
    10981 ttctttactt atccttaatt gctacgccat cgtttcatct tgattacctc gtttagataa
    11041 tagtctttca gtttgctttt agtactcgct ccaactatca gggagatagt tggagattgg
    11101 aaataaagcg aacaacgttc gcgtcaaaag ctgcaggcag cttgtacagt cgagtgactg
    11161 tacaaggttg gaaatagtac ttgcggagca agtctccccg gcagaatacg gcaaagcgag
    11221 ttcaaataat gatgaaatta tttgaagttg gaaatatgga aacgaagttt cctcattcgt
    11281 cgacgtaata aaagataaac tgaatgacta aaggaaaaag cccacgcagg aaaaataacc
    11341 tgcgagggcg tcaatggaca cggtgccacc tcacttatgg actcgactag aaaagtccat
    11401 aactttttct cctctaacaa ggaggcgcac gataaggggt gcggaccgaa ttctcattgt
    11461 ttcgaattca tcgaaccaaa ctcgctttac taaaccagac aatccataaa atggatacga
    11521 atgcttgttt ggcatcagcc catttcataa acctctatca tctattcaca ccaaccatag
    11581 actctctaaa gacaaagtgt ttatt
//
LOCUS       DBNFCX010000072        11602 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.072, whole genome shotgun sequence.
ACCESSION   DBNFCX010000072 DBNFCX010000000
VERSION     DBNFCX010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 11602)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11602)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11602
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.072"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            116..844
                     /locus_tag="AC1PJC_001672"
     CDS             116..844
                     /locus_tag="AC1PJC_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid transporter"
                     /protein_id="HIP6620653.1"
                     /translation="MNMFRSIFKSIIYRRDVALFYAFAVLPILVPILSKFLVGVKAEY
                     TDNFLDFLGAALATQDGIVLPTLLLSLIISAVFRDEIDSGILFLYKDLNRSRLFNAKI
                     ISLVAMYASYVLLTMLTSAIAYFGFLNASGKVVSDDWNNVQSTLLSIFATISINVIGI
                     LLVAMVSIKAKSLQAVLAGVFWSLFTTTAPFLIGVRYVVPNGYAQMSFNQPLLAWSLV
                     AAITTFYIVAIYLKGRSNFEKLEF"
     gene            854..1432
                     /locus_tag="AC1PJC_001673"
     CDS             854..1432
                     /locus_tag="AC1PJC_001673"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HIP6620654.1"
                     /translation="MVIRYIKLVALSIALIILASISYLLATSMVLFSPSQFLQVAYLF
                     SILVGMPVGFILLPSMLTKRYQLCQELSEVKFSWKSFVLLAIAIFLINFWFIQSEEYV
                     NQFIIATCEEFLFRYLIYRILKSEYPTWLAMLVTSLLFGVLLHMNYPLLDNLIIRTPL
                     GLLFSVLATRFGLQYAIGGHWIYNLLVSRFPF"
     gene            1447..1875
                     /locus_tag="AC1PJC_001674"
     CDS             1447..1875
                     /locus_tag="AC1PJC_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Msa family membrane protein"
                     /protein_id="HIP6620655.1"
                     /translation="MIFILLLSLFYTCLTVVNSQLLLSLSVPILLLLTYLLPPIVNSI
                     CLGLQKDNSWKAWSAGIFPTMSMIFYAAFAYITSSNGQWAQFSQLNTVSDDVMSVEVA
                     SDLLDPSQMLFVAVLYYGTAIATYFIQQAGRKKEKGVTYA"
     gene            1868..2740
                     /locus_tag="AC1PJC_001675"
     CDS             1868..2740
                     /locus_tag="AC1PJC_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6620656.1"
                     /translation="MLKINHLSKQFAGNEFYSLKDVSLEINKGEIVGLIGKNGAGKST
                     LMKLMAKSLKPSSGTITYKGTDIFSQDNLLADFGIMIDPVFYPEMTVMDNLKFYLDLH
                     GKKDLYPNIEKTLKLVELWEARNRKPKGFSFGMKQRTALAIALVAEPDFLILDEPFVG
                     LDPIGVQKLIDILKQWSSERQISMLISSHQLGELEALCSRYVYIESGELADAFEGKSH
                     PSVLVQLDTTKKLDSVEALLNDHVVLEGEVLEISTATPTSELNQIFGVLARQELIVKL
                     EVKENHLKEIFTKG"
     gene            2746..3516
                     /locus_tag="AC1PJC_001676"
     CDS             2746..3516
                     /locus_tag="AC1PJC_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620657.1"
                     /translation="MKRIFPAVFRTIWKRKETQVYLLFTLFPFIYLVTSFIEGSNFMQ
                     IHAEEGSVSLVAFTNMMMSSVDSFVLPSLTLYFLAISVFRKEVDEHTMFLYRDLGRKQ
                     IFWSKYLGILATIVIFYGLFFVTSAFVHYVRVIHQPFGSPAIFDASLAESLSELFCIV
                     AYLLKDILSVSLATALCLYLKNITTMIIGFLVTITMMILAIVGGPVAMIFPTSYIPLA
                     NEGLTGAGLAYLGAIGVTIIYVLVFTKIAAKKFKNLEF"
     gene            3519..5231
                     /locus_tag="AC1PJC_001677"
     CDS             3519..5231
                     /locus_tag="AC1PJC_001677"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6620658.1"
                     /translation="MNRRLVGVLLKSLNKTMFLFGIVLSALGVGMGLFLPQFIGRLLD
                     QTYLRNLLTRPELLAGFILFFVSVYAVQALSNYFIGRSGSKALKQLQQYIYESLLTTS
                     VKDLDQYQSGDLASRLTNDMSVVLNFITAILPNFLMNGLMVMGSIYFLWTISPWLTGL
                     SLFLLPLLSMVMIPMNQRLEGYYSDYQEGLGRVSSRISHKFTTIRLMKAFQGEKHEQR
                     EMGKSFQYLSQTFEKMIRLSAVQHTLVSSLMTGFIILMLLIAGIEVTKGVMTMATLTT
                     FVLYMMQLIDPVTDIAASLNELTEFHAVSKRLVELLELNKEEQVDTELVDAASIQLEK
                     VRFSYHTDPILNGVSVRIPEGAHVAIVGPSGAGKSTIFALLMKYYQDYQGKIRIGQQC
                     LSDISTKEMRRLISFIPQDNTLFHGTIRENLLYGKNESVSEERIAHILKELGLSPLVA
                     ELEDGLDTRISENGTGLSEGQKQRFSIARALLLEHPIYLLDEATASLDTVTERVISKA
                     IDRLTAGKTRLTIAHRLHTVREADAILVLDKNGQVADYGHHQQLVERNHLYQDFLRGL
                     PQAS"
     gene            5350..6186
                     /locus_tag="AC1PJC_001678"
     CDS             5350..6186
                     /locus_tag="AC1PJC_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003090229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6620659.1"
                     /translation="MERSMITVQHIHKQFGDRVALDNISFDIQEGQIFGFLGPSGSGK
                     TTMIKIITGQLPADSGKSYLLGKESALLSPEDFEAMGLVSDSSGFFEKMTLENNLLFY
                     AKFFGVSPKEVEVILQKVGLLDSKKTIAEKLSTGMKQRMLLARVLINSPKVLFLDEPT
                     SGLDPTTSKRIHELLLELKGKGTTIFLTTHDMAEATFLCDQLVLLNQGNLVEKGSPQD
                     LIHKYNVTKKVRVTFEDGSDTELLFSELTPEKLAQATTIHSCEPTLEDIFIQQTGATL
                     NV"
     gene            6179..6922
                     /locus_tag="AC1PJC_001679"
     CDS             6179..6922
                     /locus_tag="AC1PJC_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIP6620660.1"
                     /translation="MYKRFLALLWLRTQVLVTNKNILLPVLMPYFMLLLFKFVMKTDD
                     TKAMDLMGICFSMAIGMSVGSPISAMISEEKEKNNLSTLLLTGVRPSEYVLSILCYPV
                     VISFVNLILFPAITQADVSGYMLSYSVIMLLTSLASILINLLIGATSQSQSKSQVTSM
                     IITMAVSMGPSLSLMNETVGQILKYSFLGAYIEFFKNPYVEIWNQELYYLLGWIVLIS
                     LTLILYLGNWRKYFKNRLLGLKEKIQYSL"
     gene            6974..7147
                     /locus_tag="AC1PJC_001680"
     CDS             6974..7147
                     /locus_tag="AC1PJC_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620661.1"
                     /translation="MKQKTYTLSLGGNDREDSKVSKMEERFEKYMEGIAERLQKSGKK
                     RIDKWFIRVRIEE"
     gene            7272..8540
                     /locus_tag="AC1PJC_001681"
     CDS             7272..8540
                     /locus_tag="AC1PJC_001681"
                     /inference="COORDINATES: protein motif:HMM:NF024803.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HIP6620662.1"
                     /translation="MQVKDVEKLTGLSTKAIRLYEEKGLIEVARNPINDYRDYSEENV
                     RQLRLIKLLRYFEFSLVEITDLLALPEEDLRSALREKKRGINQRAEELTDKVDLLDQV
                     VKEMGKKEDWLEEAQESIAFVESGEFQDFKQDLEDALLPSIWMTLLQTLSLSGPILWL
                     FIRIQEGRQENLFLLAVVSLLATAWITLIWRDYLITWWKYRDKVRQKNRSQAWWIPIG
                     LISLVGGIAYFVLVGWLTERFFLPSDWLFYEYSTGLGKVAIFFIMAFLVFLLGKLARL
                     VKLSWKYGLGLAGGCIMLTALLISTTTAVTKDQIIDINLLAPSKEYLYSDVKSVWTGF
                     GTKLVTVNRAERQGEFSYQIQLDGKKIVFMQPTVNQNLVPDDTYIELEEFDRQLMNLE
                     IPKESSTEGSQYNELDSHYLKRFLRIVENK"
     gene            8734..9735
                     /gene="ruvB"
                     /locus_tag="AC1PJC_001682"
     CDS             8734..9735
                     /gene="ruvB"
                     /locus_tag="AC1PJC_001682"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HIP6620663.1"
                     /translation="MTNRILDMEQMQDEEYVERTLRPQKLNEYIGQDKVKDQLKIFIE
                     AAKLRDEALDHTLLFGPPGLGKTTMAFVIANELGVNIKQTSGPVIEKAGDLVALLNDL
                     EPGDVLFIDEIHRMPMAVEEILYSAMEDFYIDIMIGAGEASRSVHLELPPFTLIGATT
                     RAGMLSNPLRARFGITGHMEYYELADLTEIVERTADIFDMEITHEAAIELARRSRGTP
                     RIANRLLKRVRDFAQIMGNGLIDDSITDKALTMLDVDREGLDYVDQKILRTMIEMYGG
                     GPVGLNTLSVNIAEERETVEDMYEPYLIQQGFLMRTRTGRVATAKAYEHLGYPYTEK"
     gene            9803..10426
                     /locus_tag="AC1PJC_001683"
     CDS             9803..10426
                     /locus_tag="AC1PJC_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HIP6620664.1"
                     /translation="MTPTFIWDLDGTLLDSYEAILAGIQETYEQFYLPFDREEVKQFI
                     LRYSVKDLLVRDADKYGLDSDELNRVRATSLKEKNTQIPLMTGAREILDWTAEKGIQN
                     FVYTHKSDNAFQVLEDLGVRHHFTEILTSNSGFARKPSPEALLFLIEKYGLNKENTYY
                     IGDRLLDVETAINAGIHSINLQIDGVEHNWKIVSLLGIKQILTDEYK"
     gene            10532..11434
                     /locus_tag="AC1PJC_001684"
     CDS             10532..11434
                     /locus_tag="AC1PJC_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIP6620665.1"
                     /translation="MNDKEFGQRVRQLRESANMTREQFCDDELELSVRQLTRIEAGTS
                     KPTFSKIQYIATRLGMGLYELMPDYVSLPERYSKLKFDVLRTPTYENEELMEKRADMM
                     TEIYDEYYDDLPEEEKIAIDAIQSIIDVFETKTAEFGQDILEDYFEQIHRKKQFSVND
                     LLIIQLYLINLRMEVKQSSDFQYFLELVEKFPSQVELVESGDLFILRDVMITSVGLLG
                     QKEEFSYIPTLFEALDKIMQKTQDFQKKPILNLLKWKYELLINKDKDAATALYEEALL
                     FARIIGNAHLTAKLEEEWRKDSQL"
BASE COUNT         3318 a         1989 c         2671 g         3624 t
ORIGIN      
        1 tatcgccgcg gtcgtcacac tttgtaaaaa taacttgata gctaatttga tttagctatc
       61 aataagatgg gaatttgtta cagttcctat cttattgata aaaaggggaa acaatatgaa
      121 tatgtttagg tctattttta aatcgattat ctatagaaga gatgttgctt tgttctatgc
      181 ctttgctgtt ttaccaatct tagttccgat attgtctaaa tttttggtag gtgtaaaagc
      241 tgaatataca gataattttt tagattttct aggggcagca ttggcaacac aggatgggat
      301 tgtgttacca acattgctgt tatccttgat aatttccgca gtttttaggg atgagattga
      361 tagtggtatt ctatttttat ataaagatct gaatagatcc cgacttttta atgcaaaaat
      421 catcagttta gtggcgatgt atgcctctta tgtccttcta acaatgctga caagtgcgat
      481 tgcttatttt ggtttcttga atgcttctgg aaaagtagta tcggatgatt ggaataatgt
      541 acagtccact ctcctatcta tttttgcaac aatttcaatc aatgttatcg gtattctatt
      601 ggttgccatg gtttctatca aagccaaatc cttacaggca gttttagcag gagttttttg
      661 gtcgctgttt acaacaactg caccatttct cattggagtt cgttatgtcg taccgaatgg
      721 ctatgctcag atgagcttta atcagccact gcttgcatgg tccttggtag cagctataac
      781 gacattttat attgttgcta tctatctcaa aggccgttcg aactttgaaa agctggaatt
      841 ttagaggtat tttatggtaa ttcgctatat taaactggtt gccttatcca ttgctttgat
      901 tattttagca tcaatttctt atcttctagc aacatctatg gttttgttta gtcccagtca
      961 atttttacag gtggcttacc tattttctat actggttgga atgccagtag gatttattct
     1021 acttccatct atgttaacca agcgttatca actttgccag gagctatcgg aagtaaagtt
     1081 cagttggaaa agttttgttt tgcttgctat tgcaattttc ctgatcaatt tctggtttat
     1141 tcaaagtgaa gaatatgtca atcaatttat tattgcgact tgtgaagaat tcttgttccg
     1201 ttatcttatc taccgtattc taaaaagtga ataccctact tggctagcta tgttggtcac
     1261 ttctctcttg tttggagttt tgctacatat gaattatcca ttgttggata atctaatcat
     1321 tcgaactcca ttaggtttat tgttctctgt attagctaca cgttttggat tgcagtatgc
     1381 tatcggagga cattggatct acaatctgtt ggtttcgaga tttccatttt aattgtgagg
     1441 gttatgatga tatttattct actattgagt ttattttata cttgtttgac agttgtaaat
     1501 tcgcaactac tgttaagcct ttcggttcct attttgttat tgttaaccta tttgctacca
     1561 cccattgtca attcaatctg tttaggattg caaaaggata attcttggaa agcatggtca
     1621 gcaggcattt ttccaacaat gtcaatgata ttttatgctg cttttgccta cattacgagt
     1681 agcaatggtc agtgggctca gttttctcaa ctgaatacag tttcagacga tgtcatgagt
     1741 gtcgaggtag ctagtgatct gttagatcca tcacaaatgc tatttgttgc cgtactatat
     1801 tatggtacag ctattgccac ttattttatt cagcaggcag gtcgtaagaa agaaaaagga
     1861 gttacttatg cttaaaatca atcatttatc aaaacagttt gcaggaaatg aattttactc
     1921 actaaaagat gtgagtttgg agatcaataa gggcgagatt gttggtctga ttggaaaaaa
     1981 cggtgctgga aaatccacgc ttatgaaact catggccaag tccctaaaac caagttcggg
     2041 aaccattact tataagggta cggatatttt tagccaggat aatttgttag cagactttgg
     2101 gattatgatt gatccagtat tctatccaga aatgactgtt atggacaatc tcaagtttta
     2161 tttggacctg catgggaaaa aagacctcta tccaaatatt gagaagactt tgaaattggt
     2221 agaattatgg gaagctcgca atcggaaacc caagggattc tcgtttggta tgaaacaacg
     2281 gacagctttg gcgattgcct tggttgcgga gccagatttt cttatcttag atgagccttt
     2341 tgtgggcttg gatccgattg gtgttcagaa attgatcgat atcttgaagc agtggtctag
     2401 tgagcgacaa atttccatgc tgatttcgag tcaccaacta ggtgagttgg aggccttgtg
     2461 cagccgctat gtctatatcg aatcgggaga attggcagat gcttttgaag gcaaatctca
     2521 tccaagtgtg ctcgtgcagt tggacacgac taaaaaacta gattccgtag aggctttgct
     2581 caatgaccat gtggtgctag agggggaagt gttagagatt tccactgcta cacctacaag
     2641 tgagctaaat cagatttttg gtgtgttggc tcgtcaagaa ttgattgtga aactagaagt
     2701 gaaagagaat cacttgaaag aaatctttac gaaagggtag tgagtatgaa gcgaattttt
     2761 ccagctgtct ttagaacgat ttggaagcga aaggagacgc aggtttatct cctattcact
     2821 ttgtttcctt ttatttatct agttacttcg tttattgaag ggtcgaattt tatgcagatt
     2881 catgcggagg agggatcggt tagtcttgtt gcctttacga atatgatgat gagctctgtg
     2941 gatagttttg tccttcctag tttgaccctg tatttcttgg ctatatctgt ctttaggaaa
     3001 gaagtagatg aacataccat gtttttatac cgggatttag ggcggaagca gattttctgg
     3061 tctaaatatc ttggtatatt agcaacaatt gttattttct atggtctctt ctttgtgaca
     3121 tctgcatttg tacattatgt tcgggtaatc catcagcctt ttggtagtcc tgctattttt
     3181 gatgctagtt tggcagagag tttgagtgaa ctgttttgta ttgtcgctta tttgctaaaa
     3241 gatattttat cggttagttt ggcaacggct ctttgcttgt atctgaaaaa tattaccaca
     3301 atgatcatag gatttttggt gacgattacg atgatgattt tagcaattgt tggcggtcca
     3361 gttgcgatga tttttccaac tagttatatt cctttggcca acgaaggcct gacaggagcg
     3421 ggacttgctt atttaggagc tatcggtgtc acaattattt acgtactcgt atttactaaa
     3481 attgctgcga aaaaattcaa gaatttggag ttctagttat gaatagaaga ctcgtcggag
     3541 tgttgttgaa gtcgctcaat aaaacgatgt tcttgtttgg gatagttctg agtgcacttg
     3601 gggttggaat gggtttgttc ctgccccagt ttattggtag gttgctagat caaacctatt
     3661 tgagaaatct attaacacgg ccagaattgc tggcaggttt catccttttc tttgtatcgg
     3721 tctatgcagt acaggctcta tctaattatt tcatagggcg tagtggtagt aaggcactca
     3781 aacagttgca acaatatatt tatgaatcct tgttgactac atctgtaaag gacttggatc
     3841 agtaccaatc aggcgatctt gctagtcgtt tgactaatga tatgtcggtt gttctgaact
     3901 tcatcaccgc tattcttcca aatttcttga tgaatggttt gatggttatg gggtcaattt
     3961 attttctgtg gaccatcagt ccgtggctca cgggtcttag tctcttcttg cttccgttgt
     4021 tgtcaatggt tatgattccg atgaatcagc ggttggaagg ttactactct gattatcaag
     4081 agggattagg gcgggtttct agtagaatta gtcataaatt tacaacgatt cgtttgatga
     4141 aggcatttca gggagaaaag catgaacagc gagaaatggg caagtctttt cagtatctgt
     4201 cacaaacctt tgagaaaatg attagactgt cagcggtcca acataccttg gttagtagct
     4261 tgatgacggg atttattatc ctgatgttgc ttatagcggg gatagaagta accaagggag
     4321 tgatgaccat ggctacattg acaacctttg tattgtacat gatgcaactg attgatccag
     4381 tcacagacat tgctgcttcc ctaaatgaac tgacggagtt tcatgcagtg tctaaacgtt
     4441 tggtagaatt gctggaactg aataaggaag aacaggtaga tacagagttg gttgatgctg
     4501 ctagtatcca gttggaaaaa gttcggtttt cctatcatac agatccgatt ttgaatggag
     4561 tatcggttag aattcctgaa ggagctcacg tggcgattgt tgggccaagc ggagccggaa
     4621 agtcaacgat ttttgccttg ctgatgaaat attatcaaga ctatcagggg aagattcgga
     4681 ttggtcaaca atgcttaagt gatatttcaa ccaaggagat gagaagattg atttccttca
     4741 tacctcaaga caatacgctc ttccatggga cgattagaga aaatctattg tatggaaaga
     4801 acgagtctgt gtctgaagag cgtattgctc atattctcaa ggagttggga ttgtctcctt
     4861 tagtagctga gttggaagat ggtttagata ctcggatttc agaaaatggg acaggtttgt
     4921 cggaaggcca aaaacaacgg tttagcattg cgagagcctt attgctagaa catccgattt
     4981 atttgctaga tgaggcgaca gcaagtttag acactgtcac agaacgtgtc attagcaaag
     5041 cgattgaccg gttaacagct ggcaaaacaa ggctaaccat tgctcaccgt ttgcatacgg
     5101 tgcgtgaggc agatgctatt ctggtcttag ataaaaacgg acaagtggct gactacggtc
     5161 atcaccagca gttagtggag agaaatcatc tgtatcaaga tttcttaaga ggcttaccgc
     5221 aagccagtta gtgaatggga gtcggtggac ttccattttt ttgaactatt ttacgaataa
     5281 ataagtgagg ggagaagctg tcagtgagtt agcttttcag actcaagcat tattcaaagg
     5341 ggttagaaaa tggagcgcag catgataaca gttcaacata tccataaaca gtttggagac
     5401 agggttgcct tagacaacat tagctttgat attcaagaag gacaaatctt tggattcttg
     5461 ggtccctctg gctcgggaaa gacaaccatg attaagatta ttaccgggca gctaccagca
     5521 gatagcggaa aatcttatct actaggtaaa gaatcggccc tattgtcacc agaggacttt
     5581 gaagcaatgg gcttggtcag tgattcaagt ggcttcttcg agaagatgac tttggaaaat
     5641 aatttattgt tctatgcaaa attctttggt gtcagtccga aagaagtaga ggttatttta
     5701 caaaaagtag ggttgctgga tagtaaaaag acaattgcag aaaaactatc tacaggtatg
     5761 aaacagcgaa tgttgcttgc cagagtcctg atcaattcac caaaagtatt gtttcttgat
     5821 gagccaacaa gcggtttgga tccaacaact tcaaaacgga ttcatgaact attattggag
     5881 ctaaaaggta aggggacgac gatcttcttg accacgcatg acatggcaga agcgacattc
     5941 ttatgtgatc aattggttct attgaatcaa ggaaatttgg ttgaaaaggg aagtccgcag
     6001 gatttgattc ataagtacaa tgtcactaaa aaagtgaggg ttacttttga agatggtagt
     6061 gatactgagc tgttgtttag tgagttgaca cctgagaagt tagctcaggc aaccactatt
     6121 cactcttgtg agccgacttt ggaagacatt tttattcaac agacaggagc aaccttaaat
     6181 gtataaacga tttttagcct tactttggct tcgcacacaa gtcttggtga ccaataaaaa
     6241 catcctattg ccagtattga tgccttactt catgttattg ctgtttaagt ttgtcatgaa
     6301 aacagatgat accaaggcaa tggatttgat gggaatttgt ttttcaatgg ctattggtat
     6361 gtcagtagga agtcctatat ctgcaatgat ttctgaagaa aaggaaaaga ataatctgtc
     6421 taccttgtta ctgacaggtg ttcgcccaag tgaatatgta ctgtctattt tgtgttaccc
     6481 tgttgtcatt agctttgtca atcttattct atttccagct atcacacagg ccgatgtatc
     6541 aggatacatg cttagctact cagtcatcat gcttttgaca tcactggctt ccattctaat
     6601 caatctttta atcggggcaa cttcccaatc tcaatccaag tcacaggtta cctcgatgat
     6661 tatcacaatg gcagtatcta tgggacctag cctgtctttg atgaatgaga cagtggggca
     6721 gattttgaaa tatagttttc taggagctta tattgaattt ttcaaaaatc cctatgttga
     6781 aatttggaat caggaactct attacctctt ggggtggatt gtcctgatta gtttgacctt
     6841 gattctctac ttgggaaatt ggcggaaata ctttaaaaat agattgttag ggttgaaaga
     6901 aaaaatccaa tactctctat aatatgaatg aatactgatg attacttgta caataaatag
     6961 ataggagaag agaatgaaac aaaaaactta cacattatct ttgggaggaa atgatagaga
     7021 ggactcgaaa gtttcgaaga tggaagaaag gtttgaaaaa tatatggagg gaattgcaga
     7081 gcggttgcag aaatctggga agaagaggat tgataaatgg tttatccgtg tgcgaattga
     7141 ggagtaaaaa ggctatgttt tttgacaacc agcaaatgtt ggctgttttt tgataaaatt
     7201 gacaaaaatc cttgactcat ccctagggga atagtgtatg ctaggactat caaaacagat
     7261 ggaggttgct tatgcaggtc aaagatgtgg agaagttgac aggcttgtca accaaggcta
     7321 tacgcttgta tgaggaaaag ggcttgattg aagtggcgag aaatccgatc aacgattacc
     7381 gtgattattc agaggaaaat gtgcggcagc ttcgcttgat caagttgctc cgctattttg
     7441 agttttccct agtggagatt acggacctcc tagccttgcc agaggaggac ttacgatcag
     7501 ccttgcgtga gaaaaagcgg ggaatcaatc agcgagcaga agaattgaca gacaaggttg
     7561 atttgttgga ccaggtggtc aaggaaatgg gtaagaaaga ggattggttg gaagaagcac
     7621 aggaatccat tgcttttgtg gaaagtggtg agttccaaga cttcaaacaa gatttagaag
     7681 atgccttgtt gccaagtatt tggatgactc tcttgcagac cttgtcgcta tcaggtccca
     7741 tcctctggct gtttatccga atccaagagg ggcggcagga aaatcttttc ctattagcag
     7801 tggtttccct gctagcaacc gcttggataa cgcttatctg gcgagactac ctcataacct
     7861 ggtggaaata tagagacaag gtccgccaga agaaccgtag tcaggcctgg tggattccga
     7921 ttggtcttat ctccctcgta ggtgggattg cctactttgt ccttgtcggc tggttgaccg
     7981 aaagattttt cttaccaagc gattggctct tctatgagta ttcgactggt ctgggtaagg
     8041 ttgctatatt ttttatcatg gcttttctcg tttttctttt gggcaaactg gcgaggctgg
     8101 tgaagttatc ttggaaatat ggcttgggtc tggcaggcgg ttgtatcatg ttgaccgctc
     8161 tgctgatttc taccacaaca gcagtgacca aagaccagat catcgacatc aatctgctgg
     8221 ctccgtccaa ggagtatctt tacagcgatg tcaagtctgt ctggacaggc tttgggacca
     8281 agctagtgac agtgaacagg gctgaaaggc aaggggaatt tagctatcaa attcaactgg
     8341 atgggaaaaa gattgtgttt atgcaaccaa ctgttaatca gaacttggta cctgacgata
     8401 cctatatcga gttagaggag tttgataggc agttgatgaa tctggaaatt cccaaagaaa
     8461 gttcgacaga gggcagtcag tataatgagt tagattcgca ctatctaaaa cgatttttgc
     8521 gaatagtgga aaataaataa aatgaattct gttttagttt cccttaagtt tggcgagtta
     8581 tagtatatcc aagctagaaa tagcagaaat acttttcacc taaaggtgtc cctagctcta
     8641 agtcgcaagc gacaagagct aggtatcata taatctcctg gaaatactgg actcattgag
     8701 tctggtattt tcattttgtg ctataatggt ttcatgacaa atcgaatttt agatatggaa
     8761 caaatgcagg acgaggagta tgttgagcgt accctgcgtc cacagaaatt aaatgagtac
     8821 atcggtcagg acaaggttaa ggaccagctg aaaatcttta tcgaggcagc caagctccgt
     8881 gatgaagcct tggaccatac ccttctgttt ggacctccag gtttggggaa gaccaccatg
     8941 gcttttgtca tcgccaacga actgggcgtt aatatcaagc agactagtgg tcctgttatt
     9001 gaaaaagcag gtgacttggt ggcccttctc aacgacttgg agcctggtga cgtcctcttt
     9061 atcgatgaaa tccaccgtat gcccatggcg gtcgaggaga ttctctactc agccatggaa
     9121 gacttctaca tcgacatcat gattggggct ggggaggcca gtcgctccgt gcatttggag
     9181 ttgccgcctt ttaccctgat tggagcgacc actcgtgcgg gtatgctgtc caatcctctg
     9241 cgggcccgtt ttgggattac cggtcacatg gagtattatg agttggctga tttgactgag
     9301 atagtcgagc gcacagcgga catctttgac atggagatta ctcatgaagc tgccattgaa
     9361 ctggctcgtc ggtctcgtgg aactcctcgt atcgccaacc gtttgctcaa gcgggtgcgg
     9421 gatttcgcac agattatggg caatggcctg attgacgata gcattacgga taaggccctg
     9481 actatgctgg atgtggaccg cgaggggctg gattatgtgg accaaaagat tctccgtacc
     9541 atgattgaga tgtatggcgg tggtcccgtc ggcctcaaca ccctatcggt caatatagcc
     9601 gaggagcgtg agacggtgga ggacatgtac gaaccctacc tgattcagca gggcttcctc
     9661 atgcggacgc ggacagggcg ggttgcgaca gccaaggctt acgagcactt gggttatccc
     9721 tatacggaaa aataatggca gagcagatga gacgagtaac gaccttgttt cgagttcggt
     9781 ctaaactagg aatggagata agatgacacc gacatttatt tgggatttgg atgggacgct
     9841 tttggattcc tatgaggcga ttttggcagg gattcaagaa acctatgaac aattttatct
     9901 tccttttgac cgtgaggaag tcaaacaatt tatactgcgc tattctgtta aagatttatt
     9961 ggtgcgtgat gcggacaagt acggtctgga tagcgatgaa ctcaatcgtg tgcgtgcgac
    10021 ttccttgaag gagaaaaata cgcagattcc tttgatgact ggtgcacgtg aaattctgga
    10081 ctggacagca gagaaaggaa ttcaaaattt cgtttataca cacaagagtg acaatgcttt
    10141 tcaggttttg gaggatttgg gtgtccgtca ccatttcaca gaaatcttga caagcaattc
    10201 aggttttgcc cgcaaaccaa gtccagaagc tctgctattt ctcattgaaa aatacggact
    10261 gaacaaagaa aatacctact atatcggtga ccgtttgctc gatgtagaaa cagctattaa
    10321 tgcgggtatt catagcatca acctgcaaat tgatggtgta gagcataatt ggaagattgt
    10381 ttcgttattg ggcataaaac aaatattaac cgatgaatat aaataaaaaa caaacgtaaa
    10441 accgtttgtt ttttatttaa aaacagaaaa aagtatggaa attgagtaat gattttgcta
    10501 taatatacaa aagaatattt ggaggtattt tatgaacgat aaggaatttg gacaacgtgt
    10561 gcgccagctg cgagaatcag ccaatatgac gcgtgaacag ttttgtgatg atgaactgga
    10621 gctctccgtc cgccaattaa cccgtatcga agcaggtact tctaagccga ctttttcaaa
    10681 aatccaatat atcgcaaccc gcttaggcat ggggctctat gagcttatgc cagattatgt
    10741 gtctctgcct gaacgatatt ccaaactgaa gtttgatgta ctccgtacac cgacttatga
    10801 aaatgaggaa ttgatggaaa aacgggcaga tatgatgaca gaaatttatg atgaatatta
    10861 tgatgacttg cctgaagaag agaaaatagc gattgatgcc attcaatcta ttattgatgt
    10921 atttgaaacg aagacagcag aatttggtca agatattcta gaagattatt ttgaacagat
    10981 acatagaaaa aaacaatttt cagtcaatga tttgttgata atccagctct atttaatcaa
    11041 tttgagaatg gaagttaaac agagtagtga tttccagtat tttttagagt tggttgaaaa
    11101 gtttccgagt caagtagaat tagttgaatc tggggatttg tttattttaa gggatgtgat
    11161 gataacttct gttggacttt tgggacaaaa ggaagaattt agctatattc ctacactctt
    11221 tgaagcactt gataagataa tgcagaagac ccaagatttt caaaagaaac ctattcttaa
    11281 tctgcttaag tggaaatatg agttgttaat aaataaagat aaagatgcag caactgcctt
    11341 atatgaagaa gcacttcttt ttgcaagaat aattggtaat gcacacctaa cggctaaatt
    11401 agaagaagag tggagaaaag atagtcaatt ataggacatt tttgtcctgt tggaaaattt
    11461 actaagattg taaaatagtt ttatcaaatg aaggagatag agcaatgatt acaattctta
    11521 caaaagtttt tccatttgga gatttctcaa caagctggtg gaatttttaa cattcacctt
    11581 attcaaaaag ccaacatccg tt
//
LOCUS       DBNFCX010000073        11215 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.073, whole genome shotgun sequence.
ACCESSION   DBNFCX010000073 DBNFCX010000000
VERSION     DBNFCX010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 11215)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11215)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11215
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.073"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            76..1383
                     /locus_tag="AC1PJC_001685"
     CDS             76..1383
                     /locus_tag="AC1PJC_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excalibur calcium-binding domain-containing
                     protein"
                     /protein_id="HIP6620666.1"
                     /translation="MFKKKATQIVSETSIKKSRKFLNRKTAGITGGVLLTTFIGSQLM
                     TAELPKKDDLYGQQYVTVVKHLQEAGFKNIQGVEITDLEFGKIGESNLVELVSVDGED
                     WKEGRALKNIPITISYHVPKKDAVEFNLPASKNLADVEKELKDSGFMQIELTPVLLVE
                     EGNADKKDKIDRLQIGNHTYQSNHFYSTSLPVTLTYFDVSKDNIKLPENLAEAKTKPE
                     LEKQLKTAGFTDIKWTAVADKDKAKHEKIQKISLGGAEIQLPTKQEIISKKSNPIVIT
                     YYDFSSFAELPSSISTKTAADTKKLFTDGGFSQVSEVATETNEIAKNGQIIAVEIDGK
                     SFNEMNDKVIKKDSKVIIKYWNAEKAIAEKARKEEEERLAAEAQKVAEAQSQVQQFAA
                     TPSQNTYYPNCKAVRQAGAAPIYRGEPGYGSHLDRDGDGVGCE"
     gene            1766..2347
                     /locus_tag="AC1PJC_001686"
     CDS             1766..2347
                     /locus_tag="AC1PJC_001686"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004797 - thymidine kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HIP6620667.1"
                     /translation="MAQLYYKYGTMNSGKTIEILKVAHNYEEQGKPVVIMTSALDTRD
                     AFGVVSSRIGMRRDAVAIDDDMDIFGFIEKMEPRPYCVLIDEAQFLRRHHVYALARVV
                     DELDVPVMAFGLKNDFRNELFEGSQHLLLLADKLDEIKTICQYCSKKATMVLRTQDGK
                     PTYEGEQIQIGGNETYIPVCRKHYFSPEIKELP"
     gene            2626..3705
                     /gene="prfA"
                     /locus_tag="AC1PJC_001687"
     CDS             2626..3705
                     /gene="prfA"
                     /locus_tag="AC1PJC_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001028822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HIP6620668.1"
                     /translation="MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEAATR
                     DTVTAYREYKTVLQNIVDAEEMIKESSGDADLEEMAKEELKQAKADKEAYEEKLKILL
                     LPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGG
                     IKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLIMPEVEEVEYDI
                     DPKDLRVDIYHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIR
                     ARVADHFAQIAQDEQDAERKSTIGTGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTIL
                     SGKMDEVVDALVLYDQTQKLEELNK"
     gene            3705..4538
                     /gene="prmC"
                     /locus_tag="AC1PJC_001688"
     CDS             3705..4538
                     /gene="prmC"
                     /locus_tag="AC1PJC_001688"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HIP6620669.1"
                     /translation="MNYAQLFAAYEEQLVAIGEEAESLSFTFRGLKGLNFTEFLLLLR
                     QEVTPTDKEEIDAIFQQLSQHRPAQYIIGKADFHGLEFAVDERVLIPRPETEELVDLI
                     LQENSGAGLRILDIGTGSGAIAISLAKARSDWEVVAVDISKDALAVAQENARTNQVSV
                     HFLESDVFQAVTGQFDLIVSNPPYISPDDTDEVGLNVLASEPHLALFAEEDGMAIYRQ
                     IAEQAGAFLKEIGKLYFEIGYKQGQDLTDLLALHFPKKRIRVLKDQFGHDRKVVADDN
                     G"
     gene            4525..5133
                     /locus_tag="AC1PJC_001689"
     CDS             4525..5133
                     /locus_tag="AC1PJC_001689"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HIP6620670.1"
                     /translation="MTMDKLRTILENGGAVILPTETVYGLFAQALNEDAVNRVYQLKQ
                     RPRDKAMNLNVSNLNDIYFFSQNTPFFLEKLYNRFMPGPLTIILKANEKVPFWVNSGL
                     DTVGFRLPNHEQTLRLISETGPLIGPSANISGNESGKKFSDIQAQFSVDLPGIEDDQA
                     LTGIDSTILDLSGQKARILRQGAISREEIQKAIPEIEFEVVL"
     gene            5130..5561
                     /locus_tag="AC1PJC_001690"
     CDS             5130..5561
                     /locus_tag="AC1PJC_001690"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIP6620671.1"
                     /translation="MIRPIEKGDLVVIREINAQSLGYDCSLEQTERQFFRCTSTLGHI
                     LLVYIDDISGAVQGYIHAQVYESLYSDTGLNILGLAVLPSHQGQGIGASLLKAVEQIA
                     QKEGYHFIRLNSAESRRQAHLFYEKNGYHSDKMQKRFIKHI"
     gene            5585..6844
                     /gene="glyA"
                     /locus_tag="AC1PJC_001691"
     CDS             5585..6844
                     /gene="glyA"
                     /locus_tag="AC1PJC_001691"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HIP6620672.1"
                     /translation="MIFDKVNYKEFDKEVWEAIQAEEKRQQNNIELIASENVVSKAVM
                     AAQGSILTNKYAEGYPGRRYYGGTECVDVVESLAIERAKEIFGAKFANVQPHSGSQAN
                     CAAYMALIEPGDTVMGMDLAAGGHLTHGASVSFSGQTYNFVAYNVDEETGLLDYDAIL
                     KQAKEVQPKLIVAGASAYARTIDFAKFREIADAVGAKLMVDMAHIAGLVAAGLHPNPV
                     PHAHITTTTTHKTLRGPRGGLILTNDEELIKKINSAIFPGIQGGPLEHVIAAKAVSFK
                     EVLDPAFKDYAQKVIENSKAMAEVFLANPNFKVITGGTDNHLFLVDVTKVVENGKVAQ
                     HLLDEVNITLNKNSIPYEKLSPFKTSGIRIGSAAITARGFGVEEARKVAQLTIKALEN
                     AENETALEEVRQEVRALTDQFPLYEGL"
     gene            6844..7818
                     /locus_tag="AC1PJC_001692"
     CDS             6844..7818
                     /locus_tag="AC1PJC_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006153495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein"
                     /protein_id="HIP6620673.1"
                     /translation="MDIFVKKAIIHQFSPDDTELVLSDQLLTVSPKIEEYLRKKIERV
                     FSDEAKTGQFNPDNPFLDYLDGDLLTNSVKIANLWKEEFSISENLKTNDLIFIEFERN
                     GVEHFAFLRISLRENLAHVGLESGSPLKITQNNLPGAGSAPDEALIVNLQTRKYHLIE
                     KRIKHNGAFLNYFSDNLLQVTPAISAKKSIKAVEQTAQKIADNFQQGDFQFQSKVKSA
                     IFNNLEEDNELSPEKLADQLFDNNLTARLNFVDQLKEVIPDKISFDEIDSSRQLKKFE
                     NQKLSLSNGIELIVPNAIYEDAESVEFIQNDNGTYSILIKNIEDIKSK"
     gene            7819..8418
                     /locus_tag="AC1PJC_001693"
     CDS             7819..8418
                     /locus_tag="AC1PJC_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme family protein"
                     /protein_id="HIP6620674.1"
                     /translation="MKKLIRTLILLLLIFLGYKFYQTYSAVKQVMTYQTMVQEVLAEN
                     DTPANEELVLAMIYTETKGQEADVMQSSESATGYANTITDSRESIRQGIIYLTENLRL
                     AEEKGVEVWTAVQAYNFGPAYIDYIAEHGGEHTLSLAKEYSRTVVAPSLGNTTEETYT
                     YFHPLALLNGGKLYVNGGNIYYARQVRFNMHLMRLINLF"
     gene            8519..9277
                     /locus_tag="AC1PJC_001694"
     CDS             8519..9277
                     /locus_tag="AC1PJC_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HIP6620675.1"
                     /translation="MKRNVLITGASSGIGKAIAYVFAANGDNIIITGRRLDKLEEIKQ
                     DIEKQYHVQVSVHSFDVTNMEQTIVNCQKILEEVGQIHILVNNAGLALGLDKFQDYDL
                     TDMMTMIDTNIKGLLTVTRQLLPQMVENNEGHIINIGSTAGIYAYAGAAVYAATKSAV
                     KVLSDGIRIDTIDKNIKVTTLQPGIVETDFSQVRFHGDKERAATVYQGIDALQANDIA
                     SCTLFVANQPAHVQISDMTIMATKQATGFTIHRD"
     gene            9294..10043
                     /locus_tag="AC1PJC_001695"
     CDS             9294..10043
                     /locus_tag="AC1PJC_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6287 domain-containing protein"
                     /protein_id="HIP6620676.1"
                     /translation="MKRKYLALALGLLTIMSLSACQTEKKGSSESTSTADTQVSNAHT
                     STSSTIQREISLSSMDIDALMQGNYDSILGTWQNSQGNLLVFNSKGLVADSQSLLGRG
                     KITDGIFETGYVDATIGDVTLLMIPKGTQVNTTEIDTTDSTRDRMIVISQETTADVVD
                     VYYRLTNSATSGIDPLKNTETGVQLDSGPKTIDYANSILGENNWRVIEGNYTRTESIP
                     YNILEGDDNARYTIYQNGVIINADYQIVYQP"
     gene            10065..10418
                     /locus_tag="AC1PJC_001696"
     CDS             10065..10418
                     /locus_tag="AC1PJC_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIRAN domain-containing protein"
                     /protein_id="HIP6620677.1"
                     /translation="MTFTSFEPTRNVQDFHLAAFAYYDGLDVIDQLKPGTPIQLVGEP
                     SNPHDSEAVAIFYQGTKLGYIPSDKNSLISRLIYFGHGDILEARIQMSNTENHPDRQF
                     RVVVKLKDNRKNDSR"
     gene            complement(10439..>11215)
                     /locus_tag="AC1PJC_001697"
     CDS             complement(10439..>11215)
                     /locus_tag="AC1PJC_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620678.1"
                     /translation="ESSGNYIIVFEQDKQPVFVDLKNENGHTREVRFASHFDSAGLLV
                     GLGAIPINYWPTCQILGVKKNNNRRGLSLSSLMDGYGRLPIFKEMAERYRARGQSTIY
                     DPYRYSYTIDEKKVIKDNQLTLIPKKEYEKIKDFHPFLQTKHGNVYAVPCFYQDRKRN
                     QITKIYIMGWYFYEKQLKISWKPSHSRKSRWRSSLVSVDKLSDRFFFQGELYKKGTYP
                     VFLEDLTIKNKAYQHRLDREFAAFLSIIEEQKQRAQLRVK"
BASE COUNT         3648 a         2193 c         2299 g         3075 t
ORIGIN      
        1 ttttcataag atattgcaaa atatatttat attttgttat aataatatcg caataaacaa
       61 taaggagaat gatttatgtt taagaaaaaa gcaactcaga tagttagcga aacgtcaatt
      121 aaaaaatcta gaaagtttct taatcggaaa acagcaggaa taactggcgg cgtcctactt
      181 accacattta tcggttcaca attaatgact gctgagcttc cgaaaaaaga tgacctttat
      241 ggacaacagt atgtaacagt cgtaaaacat cttcaggaag caggttttaa aaatattcag
      301 ggggtggaaa tcactgattt agaatttgga aaaataggtg aaagcaatct tgtcgaactc
      361 gtctctgttg acggagaaga ttggaaggaa ggacgtgctt taaaaaacat cccaattaca
      421 atctcctacc atgttcccaa aaaagatgcc gttgaattca acctaccagc ttctaaaaat
      481 ttagcagatg tcgagaaaga gctgaaagat tcaggtttta tgcaaatcga actaactcct
      541 gttctgctag tagaagaagg caatgcggac aaaaaagata aaattgatcg ccttcaaatc
      601 ggaaatcaca cctatcaatc caatcatttt tactctacta gtctccctgt cacattaacc
      661 tattttgacg ttagcaaaga taacatcaaa ctaccagaaa atctagcaga ggctaaaaca
      721 aaaccagagc tcgaaaaaca actaaaaaca gcaggattta cagacataaa gtggactgct
      781 gttgcagaca aggataaagc aaagcacgaa aaaattcaaa aaattagtct aggtggtgca
      841 gagattcaat tgcccaccaa acaggagatt atcagcaaaa aatcaaaccc cattgtaatt
      901 acctactacg atttctctag cttcgctgaa ctgccatcat ccatttcaac gaaaacagct
      961 gcagatacta aaaaattgtt taccgacggt ggtttttctc aagtatctga agtagcaaca
     1021 gagaccaatg aaattgctaa aaacggacaa atcattgcgg tcgagattga tggaaaatct
     1081 tttaacgaga tgaacgataa ggtcatcaaa aaagatagca aagtcattat caaatattgg
     1141 aatgctgaaa aagctattgc tgagaaagca cgtaaagagg aggaagaacg cctcgctgcc
     1201 gaagcgcaaa aagtagcaga agcacaaagt caagttcagc aatttgctgc tacaccatct
     1261 caaaacacat attatccaaa ttgtaaggca gttagacaag caggagctgc accgatctat
     1321 cgtggagaac caggttacgg tagtcattta gaccgtgatg gagatggagt tgggtgtgag
     1381 taaaaaaaca ttgacaacgt ttacattgcg tgctatactg ctcttataaa gagggattgc
     1441 tcatggccta taaataccgt atgattttat cgttcctact cgctggatta tgtttgtatc
     1501 tagtagcaac tgtttttgcc aagagtatct gggaaggacc attgtttctt gcattttctt
     1561 tttacagcct gatatatggt tgtgttatgc tctacaagtg gaaaccaacg gcagctaaaa
     1621 tcattttcca atgtattgga gaatttctct ctttaccatg gtcttaatat caaacaagct
     1681 caaaacgggc ttgtttttct atttcctaaa tggtcaattt atgatagaat ggagggagtg
     1741 aaaatttaag attggaaaga gaaaagtggc tcaattatat tataaatatg ggacaatgaa
     1801 ctcaggaaaa accattgaga ttttgaaggt tgcccacaac tatgaagaac aaggaaaacc
     1861 tgttgttatc atgacatctg cacttgatac tcgtgatgcc tttggtgttg tatccagtcg
     1921 tataggcatg agaagagatg cagtggcgat tgacgatgat atggatatct ttggttttat
     1981 tgaaaaaatg gaaccgcgtc cttactgtgt tctcattgat gaagcacaat ttcttcgacg
     2041 tcatcatgtc tacgcacttg ctcgcgtagt cgatgaatta gatgtacccg ttatggcttt
     2101 cggtcttaaa aatgattttc gaaatgaact atttgaaggt tcccaacatt tgctcttatt
     2161 ggctgataaa ttagatgaaa tcaaaacaat ctgccaatat tgttctaaaa aagcgacaat
     2221 ggttttgaga acacaggatg gaaaacctac ttatgaagga gaacaaatcc aaattggtgg
     2281 caatgaaacc tacattcctg tctgtcgcaa acattatttt tcaccagaaa ttaaagaatt
     2341 accctaattt ttgaaaatga aatgagaagc gactgtaaac tgagcatctg tatagaactg
     2401 aatttgccta tgactctgtg ccaattttca tgacttacat actacggcaa aggaactgaa
     2461 cacgcctacg aactgtgcct gtttcatgac ctacatatta cagaaaggaa ctgaatacgg
     2521 gctacgaact gtgcaaaaaa gatagttttt cctaggacgc tttcgtcctt cgtcaaaact
     2581 cctatttttg ctttgttcgt ttaacgccct taatatctta aaattatgaa catctacgat
     2641 caattacagg cggtggaaga ccgctacgag gaacttggtg aattgttgtc tgaccctgat
     2701 gtagtcagcg ataccaagcg ttttatggag ttgtctaagg aagaagctgc aactcgtgat
     2761 acagtaacag cctaccgcga atataagact gtacttcaaa acattgtcga tgcagaagag
     2821 atgattaaag aatcttctgg tgatgctgac ttggaggaaa tggctaagga agaactcaaa
     2881 caagctaagg ctgataaaga agcttacgaa gaaaagctga aaatccttct tttaccaaaa
     2941 gaccctaatg atgataaaaa catcatcttg gaaatccgtg gtgccgcagg tggtgatgaa
     3001 gctgccctct ttgcaggcga cctcttgacc atgtaccaaa agtatgcaga aggtcaaggc
     3061 tggcgttttg aagtcatgga ggcttcttat aatggtgtcg gcggtatcaa agaagttgtt
     3121 gccatggtct ctggtcaatc cgtttattca aaactcaagt atgaatcagg agctcaccgt
     3181 gtccaacgtg tccctgtgac agaaagccaa ggtcgtgtcc acacctcaac agcaactgtc
     3241 ctcatcatgc cagaagttga agaagtggaa tatgacattg atccaaaaga tcttcgtgtc
     3301 gatatttacc acgcatctgg tgccggtgga cagaacgtca acaaggttgc gactgccgtg
     3361 cgtatcgttc acttgccaac caatatcaag gtagaaatgc aggaagaacg gacacagcag
     3421 aaaaaccgtg aaaaggccat gaagattatc cgtgcccgtg ttgcggatca ctttgcacag
     3481 attgcccaag atgagcagga tgctgagcgt aaatcaacta tcggtacagg tgatcgttca
     3541 gagcgcatcc gtacatacaa cttcccacaa aaccgtgtga cagaccaccg tatcggctta
     3601 accttgcaaa agctggatac tatcttgtca ggtaagatgg acgaagtcgt agatgccctt
     3661 gttctctacg atcaaacgca aaaactagaa gagcttaaca aataatgaat tacgctcaat
     3721 tatttgcagc atacgaagaa caattagtcg caatcggtga agaggcagaa tccctgtcct
     3781 tcacctttcg tggcttaaag ggattgaact ttacagaatt tctcctcctg ctccgtcagg
     3841 aagttacacc gactgacaaa gaagagattg atgcgatttt tcagcaactt tcccagcacc
     3901 gacctgccca gtacattatc ggcaaggctg attttcatgg cctagagttt gcggtggatg
     3961 agcgagtctt gattccaaga cctgaaacgg aagaattagt tgatttgatt ttgcaggaaa
     4021 atagcggagc aggtttgcgt atcttagaca tcggtacagg aagcggtgcc atagctattt
     4081 cccttgcaaa agctagatct gattgggaag tggtagcagt tgacatttca aaggatgccc
     4141 tagcagtggc tcaggaaaat gcaagaacca accaagtctc tgttcacttt ctagaatcgg
     4201 atgtcttcca agcagtgaca gggcaatttg acctcattgt ttctaatccg ccctatatct
     4261 caccagatga cacagacgaa gttggactca atgtattggc ttctgagcca catctagcct
     4321 tatttgcgga agaagatggc atggctatct atagacaaat tgcggagcaa gcaggggcat
     4381 ttttgaagga aattggaaaa ctctactttg aaattggcta caagcaaggg caagatctaa
     4441 ccgacttact cgctctgcat ttccccaaaa agcgaattcg agtcctcaaa gaccaatttg
     4501 gacatgatag aaaggtcgta gcggatgaca atggataaac tccgaacaat tcttgaaaat
     4561 ggtggtgctg ttatccttcc aactgaaaca gtctatgggc tttttgccca agccttgaat
     4621 gaagatgcag tcaatcgtgt ctatcagttg aaacagcgtc cgagggacaa ggcaatgaac
     4681 ttaaatgtct caaatctgaa cgatatttat tttttcagtc aaaatacacc cttttttctg
     4741 gagaaactgt ataatagatt tatgccagga ccactaacga ttatcctgaa agcgaacgaa
     4801 aaagttcctt tttgggttaa ttctggactg gatactgttg gatttcgtct tcccaatcac
     4861 gaacaaacct tacgtttgat ttcggagact ggcccactta ttggaccgtc cgccaatatt
     4921 tcaggaaacg aaagtggcaa gaagttttcg gacatccagg cacaattttc agttgatttg
     4981 cctggcattg aggatgacca agctctgaca ggcattgatt caacgatttt ggacctttct
     5041 ggacagaaag cgcggatttt gcgccaaggt gctatcagcc gcgaagagat tcagaaagcc
     5101 attcccgaaa tagaatttga ggtagtttta tgattcgtcc cattgagaaa ggtgacttgg
     5161 tagtcatccg agaaatcaat gctcaatcct tagggtatga ttgttcattg gaacaaactg
     5221 agcgacagtt ttttagatgc acgagcacat tggggcatat cttgttggtc tatatagatg
     5281 acataagtgg cgcagtgcaa ggctacattc acgcacaagt ctatgaaagt ctctattcgg
     5341 atacaggcct caatattctc ggactagctg ttttgcctag tcatcaagga caagggattg
     5401 gagcaagcct gctgaaagcc gttgagcaaa ttgcacagaa agagggctac cattttattc
     5461 gcctcaattc tgctgaaagt cgtcgccaag cccatctttt ctacgaaaag aatggctatc
     5521 actccgataa aatgcagaag cgttttatca agcatattta gcccaataca aaggagtacc
     5581 gtatatgatt tttgacaaag ttaactacaa agaatttgat aaagaagttt gggaagctat
     5641 ccaagctgaa gaaaaacgcc aacaaaataa tatcgaattg attgcgtctg aaaacgttgt
     5701 ttctaaagct gttatggcag cccaaggttc tattttgacc aataaatacg cagaaggtta
     5761 cccaggtcgt cgttactatg gcggtacgga atgcgttgac gtagttgaaa gtttagctat
     5821 tgaacgtgct aaagaaatat tcggtgcaaa atttgctaac gttcagccac actcaggaag
     5881 ccaggccaat tgtgctgcct acatggcctt gattgagcca ggagacactg ttatggggat
     5941 ggacttagct gcaggtggtc acttgactca cggtgcatca gttagcttct caggacaaac
     6001 ttacaacttt gtagcttaca atgttgacga agaaactggc ttgcttgatt acgatgcaat
     6061 tttaaaacaa gcaaaagaag tacagccaaa attgattgta gcaggtgctt cagcctatgc
     6121 acgtacaatt gactttgcta aattccgcga aattgcagat gcagtgggtg caaaattgat
     6181 ggtggatatg gctcatattg ctggtcttgt agcagcaggt cttcatccga acccagtgcc
     6241 acatgcccat attacaacaa ctacgactca taaaactctt cgtgggccac gtggtggttt
     6301 aattttgacc aatgatgaag agcttatcaa gaaaatcaac tcagccatct tcccaggcat
     6361 ccaaggtggt ccattagagc atgtcattgc tgcaaaagcc gtatctttca aagaagtttt
     6421 ggacccagct ttcaaagact atgctcagaa agtgattgag aacagcaagg ccatggccga
     6481 agtcttcctt gcaaacccta actttaaagt catcacaggt ggaacagaca accatctctt
     6541 cctcgttgac gtgaccaaag ttgttgaaaa tggtaaagtt gctcagcatc tcttggatga
     6601 agtaaatatt actctcaata aaaactcaat tccttacgaa aaactctcac cattcaaaac
     6661 aagcggtatc cgtattggct ctgcggccat tactgctcgc ggttttggag tagaggaagc
     6721 tcgcaaggtt gcacaactaa ctatcaaagc acttgaaaat gcagaaaatg aaactgctct
     6781 tgaggaagtc cgtcaagaag tgcgtgcttt gacagatcaa ttcccacttt acgaaggttt
     6841 ataatggata tatttgtaaa aaaagccatc atacatcaat ttagtcctga tgatacagag
     6901 ctggtccttt ccgaccagct tttgactgtt agcccaaaaa tagaagaata tttgcgtaaa
     6961 aagattgaac gtgtcttttc tgatgaagca aaaacaggac aatttaaccc cgacaatcct
     7021 tttcttgact atttagatgg tgacctactg accaactctg tcaagattgc taatctatgg
     7081 aaagaagaat tttcaatttc tgagaattta aaaaccaatg acctcatttt catagagttt
     7141 gaacgaaatg gtgtggaaca ttttgccttt ttgagaatct cactgcgtga aaatctcgcc
     7201 cacgttggtc tggaaagcgg aagtccttta aaaatcaccc agaataattt acctggagca
     7261 ggttcagcac ctgatgaagc cttgattgtc aatcttcaaa cgcggaagta tcatttgatt
     7321 gagaaaagaa tcaaacacaa tggagccttc ctcaattatt tctcagataa tcttctgcaa
     7381 gttacaccag ctatttctgc aaaaaaatca atcaaagcag tagagcaaac tgcacagaag
     7441 attgctgaca atttccagca aggcgacttt caatttcaat cgaaagtcaa gtcagctatt
     7501 ttcaacaatt tggaagaaga taatgagctt tcacctgaaa aattggctga tcagttattc
     7561 gataacaacc tgaccgcacg tttaaatttc gtcgatcaac tgaaagaggt catacctgat
     7621 aagatttcct tcgatgaaat cgatagtagc cgtcaactta agaaatttga aaatcagaag
     7681 ctatctttat caaacggaat tgagttgatt gtgccaaatg caatctatga ggatgcagaa
     7741 tcggttgagt ttattcaaaa tgacaacggg acctattcta ttcttatcaa aaatattgaa
     7801 gacataaaga gcaagtaaat gaaaaaactg atacgtacgc tgatacttct tttgctgatt
     7861 tttctcggtt acaaattcta tcaaacctac agtgcagtca agcaagtgat gacctatcaa
     7921 actatggtac aagaagtatt ggctgaaaac gacacaccag ctaatgaaga actagtccta
     7981 gcaatgattt acacagaaac caagggacaa gaagcagatg tcatgcaatc aagtgagtcc
     8041 gctactggct atgctaacac tatcacggat agtagagaga gtatcaggca aggaattatc
     8101 tacctaacag aaaacctacg gttggctgag gaaaaaggag tagaggtttg gacagcagtt
     8161 caggcatata atttcggtcc agcctatatt gactatattg ctgagcatgg tggagagcat
     8221 acactctctt tagctaaaga atactccaga acagtagtag caccaagctt agggaatact
     8281 acagaagaaa catataccta ttttcatccc ttggctttgc taaatggtgg gaagttatat
     8341 gtaaatggtg gaaatatcta ctatgctaga caggttcgtt ttaatatgca cctgatgcgc
     8401 ctcattaatt tattttaata cctatcaaac tcatcggaaa tctgatgagt ttttaactac
     8461 agcattttta caaactaggt aaaattgtag tataataaag agaataggag acagagtgat
     8521 gaaacgaaat gtattgatta caggtgcaag tagtggtatt ggcaaagcaa ttgcttatgt
     8581 gtttgctgct aatggtgata atatcatcat tacaggacga agattggaca aactagaaga
     8641 aattaagcaa gatattgaaa agcaatacca tgttcaggtg tcagttcatt catttgatgt
     8701 tacgaatatg gaacaaacaa ttgtaaattg tcaaaaaatc ttagaagaag ttggacaaat
     8761 tcatattttg gtaaacaatg ctggcctggc attgggattg gacaaattcc aagactatga
     8821 tttgactgac atgatgacaa tgattgatac caatattaaa ggattactaa ctgtgacacg
     8881 tcagttattg ccacaaatgg ttgaaaataa tgagggtcat attatcaata ttggatcaac
     8941 ggccggtatt tacgcctatg caggagctgc tgtctatgct gcaaccaaat cagctgtcaa
     9001 ggtgctttca gacgggatcc gtattgacac gattgataaa aatatcaagg taactacgtt
     9061 acaacccggt atcgttgaga ctgattttag ccaagtccgt tttcatggag ataaagagag
     9121 agcagccaca gtctatcaag gaattgatgc tcttcaagca aatgatattg ccagctgtac
     9181 tctatttgtt gcaaatcaac ctgcacacgt acagatttct gatatgacca ttatggcaac
     9241 caaacaggca actggcttta ctattcatag agattagagg ggagatagct agaatgaaaa
     9301 gaaaatattt agcactcgct cttggcttgc tcacaatcat gtcgctttct gcctgtcaaa
     9361 ctgaaaagaa gggcagttcc gaaagtacct caactgctga tacccaggtt tctaatgccc
     9421 atacaagcac gtcgtcaaca atccaacgtg agatttctct tagttctatg gatatagatg
     9481 ctctaatgca aggcaattac gatagtatac taggcacctg gcaaaatagc caaggaaatt
     9541 tactagtctt caatagcaaa ggattagtag cagatagcca gtccttactt ggccgcggaa
     9601 aaataactga tggaattttt gaaacaggct atgtagacgc aacgattggc gatgtaacac
     9661 tattaatgat tcccaaagga acacaagtaa atacaaccga gatagacact actgactcta
     9721 cgcgcgatag aatgattgta ataagccaag aaacaacagc agacgtggta gatgtctatt
     9781 atcgcttgac caattcagcc actagcggta tagacccatt aaaaaatact gaaacaggcg
     9841 tccagttgga tagtggacca aaaacgattg attatgccaa ctcaatttta ggcgaaaaca
     9901 attggcgcgt cattgaaggt aactacacac gcaccgaatc tattccttat aatattttgg
     9961 aaggcgatga taatgcccgt tacactattt accaaaacgg tgttattatc aatgcagatt
    10021 atcaaattgt ttatcaacca taatgattct ctaggagatt agacatgaca ttcacatcat
    10081 ttgaaccaac acgcaatgtt caagattttc atttggcagc ctttgcctac tatgatggac
    10141 tagatgtaat cgaccaactc aagccaggaa cacctattca gctagtcgga gagccttcaa
    10201 acccacatga ctcagaagct gtagcaatct tttatcaggg cacaaagtta ggatatatcc
    10261 catcggataa aaactcacta atcagtcgct taatctattt tggacacggc gatattctag
    10321 aggcacgtat tcagatgtcc aatacagaaa atcatcctga tcgccagttt cgagtcgttg
    10381 taaaactaaa agataatcgt aaaaatgata gtcggtaatt taccaaccta accattttct
    10441 acttaacacg gagctgtgct ctctgttttt gttcttcaat aatgcttaaa aaggctgcaa
    10501 actccctatc caggcgatgt tggtaggcct tattttttat tgtgagatct tccaggaaca
    10561 ctggataggt tcctttttta tacaattctc cctgaaagaa gaagcggtcc gataatttat
    10621 caactgaaac aagagaagaa cgccagcggc ttttacgaga gtgagaaggt ttccaagata
    10681 tttttaattg cttctcataa aagtaccagc ccataatata gattttagta atctgatttc
    10741 gttttctgtc ttgatagaag caaggaactg cataaacatt tccatgcttt gtttgcaaaa
    10801 aaggatggaa atcttttatc ttttcgtatt ctttctttgg aataagggtt aattgattat
    10861 ccttaataac cttcttttca tcaatagtat atgaataacg gtaggggtca taaatagttg
    10921 attgtccacg cgctctataa cgctctgcca tttccttaaa aataggtaga cgtccataac
    10981 catccatcag actagataga ctaagtcctc gtcgattatt atttttcttc acaccaagaa
    11041 tctggcaggt aggccaataa ttgataggaa tggctcctaa gccgaccaga agaccggcgc
    11101 tgtcaaaatg actggcaaag cgtacctcac gagtgtgacc gttctcattt ttcaaatcaa
    11161 caaatacagg ttgcttgtcc tgttcaaaaa caattatata atttccagaa gactc
//
LOCUS       DBNFCX010000074        11083 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.074, whole genome shotgun sequence.
ACCESSION   DBNFCX010000074 DBNFCX010000000
VERSION     DBNFCX010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 11083)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11083)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11083
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.074"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(78..542)
                     /locus_tag="AC1PJC_001698"
     CDS             complement(78..542)
                     /locus_tag="AC1PJC_001698"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620679.1"
                     /translation="MNFSKKMKNFAMLSVACMSTGLTALAPVVSANTAESNTYVKYKT
                     RETANYTRNSFVNVKLTQQTGVPGAQVEVFLKTPYVEAPDVYFVLGEYNIIPLVRTES
                     GSYVANLTDEDLVGSEDFHVEIISKIPHGTHKHIVESKSFKLESSFLRSFVR"
     gene            complement(951..1403)
                     /locus_tag="AC1PJC_001699"
     CDS             complement(951..1403)
                     /locus_tag="AC1PJC_001699"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620680.1"
                     /translation="MNFSKKMKNFAMLSVACMSTGLTALAPVVSANTSESNTYVKYST
                     KETVTYRRSSAVDVTLSQKTGIPGARVDVKLKQKYAEAPDVYFILGENYVIPLDQTPS
                     GDYAANLTDADLKGAKKFRIEIISKIPYGSAKNIVENKSFKLDPSFRR"
     gene            complement(1683..5162)
                     /locus_tag="AC1PJC_001700"
     CDS             complement(1683..5162)
                     /locus_tag="AC1PJC_001700"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775646.1"
                     /note="This family includes IgM or IgG-cleaving cysteine
                     proteases; Derived by automated computational analysis
                     using gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IdeS/Mac family cysteine endopeptidase"
                     /protein_id="HIP6620681.1"
                     /translation="MNIQERFSLRKSAVGLVSVSLLCAIHTSTVAADTVVTGVNEIIE
                     ESQVKDEASIESEKNESLDGSNLEIVEEIADNIPSPVIAEGEIAVEMKVDGGTENVVS
                     RNDKEVTTSEQNQIEVAETKVNQTSYQTESGEQRQIIWAHGITPPAMEQSGGFVKEKY
                     GDYLNYTAPFEAGKGYYDTNKSLDASFIDLNLCFAAVSSNMVHWWLEQNSSYVERYLK
                     EKNSTVNVGENYAITDLRRYIDSFQDQQNSRVFDMFKTYYGYRTNGFVSDALVDLFIN
                     GYKPKVQGGVNLEDSQLVPDSRGGFFYDVFKEKKLTNRIFSGSYERFGEDVRTVLESK
                     GLLGLTYRTLGYATHIVTVWGAEYDNQGKIRAVYITDSDDQQEQIGLKRMGITRDASG
                     NPRLNNHVKNNSAGALLDYVHTIRLGQDLWEEYFNPLAKAKEIASQILADRKKALVLS
                     IQGQSELPESARVTYLEKLDRLYDQGVLAIQKAESSELLNVALEDSLKSLDFPMSAVG
                     EALTAELPAGELSPNAAENSQLSQEILSADGKEEEGNIALVVDSINQPVLPVDDQAIL
                     PVAVIGEPVNDEQLVANENQSQSTIALGEGIQVEGSDLPVVVDQDAVKNDEVVPVEEP
                     LESETVENQRSELLSGPLGMEGVNVKEDQVATTATEQPTTSKTTTVQASLDESASAES
                     ETVTQTAPTSSPGTLDIPVQPEVTEVAVEVGETDIPPVALPETVSAPVVQASLDESAS
                     AERETVTQTAPTSSPGTLDILVQPEVTEVAVEVGETDIPPVVLPETVSAPVVEASLDE
                     PAGAESETVAQTSPTSSPGTLDIPFPPEVTEVAVEVGETDIPPVVLPETISAPVVEAS
                     LDESASAESETVFQPAPISSPDRSAIPVQPEVAVEVGETDIPPVVLPETVSAPVVQAS
                     LDESAGVESESVAKNEATLVPVAEDIPALPGHSAIRVAESVAKLSTISEKHKFVDGEV
                     SSTLKVGSEGAANESNVPQVEFLTEATTESILAEADRSSILTETKVIQPNKLMSDLES
                     TERILVPKSKSLDSVKMDMSSQEIVLPEVPEREPQMSSIEMDKGYKETDLDESAEPKV
                     IVGGISQSSNNTRKYGQNQAVHSKIDTKQVLSVEQSSKTMTNASGQIVGISLLTLLLG
                     SVWGLLKKASKKQ"
     gene            complement(5327..6832)
                     /gene="pyk"
                     /locus_tag="AC1PJC_001701"
     CDS             complement(5327..6832)
                     /gene="pyk"
                     /locus_tag="AC1PJC_001701"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008809276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0030955 - potassium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HIP6620682.1"
                     /translation="MNKRVKIVATLGPAVEIRGGKKFGDDGYWGEKLDVEASAQKIAA
                     LITEGANVFRFNFSHGDHQEQGDRMATVRRAEEIAGKKVGFLLDTKGPEIRTELFEGD
                     AKEFSYTTGEKIRVATKQGIKSTRDVIALNVAGGLDVFDDVEVGKQVLVDDGKLGLKV
                     IEKDAEKREFVVEVENDGVIAKQKGVNIPYTKIPFPALAERDNADIRFGLEQGLNFIA
                     ISFVRTAKDVEVVRNICKETGNDHVQLFAKIENQQGIDNIDEIIEAADGIMIARGDMG
                     IEVPFEMVPVYQKMIITKVNAAGKAVITATNMLETMTEKPRATRSEVSDVFNAVIDGT
                     DATMLSGESANGKYPVESVRTMATIAKNAQTLLNEYGRLNSDHFNRASKTEVIASAVK
                     DACHSMNIKLVVTVTETGYSARSISKYRPDADILAVTFTEKVQKSLMLNWGVIPVVTK
                     RPDSTDDMFDLAERIAKEQGLVEAGDDIIIVAGVPVGVAGSTNTMRVRTVK"
     gene            complement(6899..7909)
                     /gene="pfkA"
                     /locus_tag="AC1PJC_001702"
     CDS             complement(6899..7909)
                     /gene="pfkA"
                     /locus_tag="AC1PJC_001702"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005590682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006002 - fructose 6-phosphate metabolic
                     process [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HIP6620683.1"
                     /translation="MKRIAVLTSGGDAPGMNAAIRAVVRQAISEGMEVYGINEGYAGM
                     VAGDIHELSARSVGDIISRGGTFLGSARYPEFAKLEGQLKGIEQLKKHGIEGVVVIGG
                     DGSYHGAMRLTEHGFPAIGVPGTIDNDIVGTDFTIGFDTAVTTAMDAIDKIRDTSSSH
                     RRTFVVEVMGRHAGDIALWAGIASGADVIVVPEEDFNINDIVDRIKAGYDNGKKHSII
                     VLAEGVMPAAQFAEELKAAGDTSDLRVTELGHIQRGGSPTARDRVLASRMGAHAVKLL
                     KEGRGGLAVGIRNEQMVENPILGTAEEGALFSLTADGKIVVNNPHKADLELADLNRNL
                     SI"
     gene            complement(7994..>11083)
                     /locus_tag="AC1PJC_001703"
     CDS             complement(7994..>11083)
                     /locus_tag="AC1PJC_001703"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HIP6620684.1"
                     /translation="KTVYTFMDSMVTIENYVGKAKELGYHALGIMDKNSLYAAYSFME
                     SCNKMGLQPIIGCELDWKLQGEEQGITTQLIALTTRGYRNLLKISTAKMTGQDDFETI
                     RQYLVDIAVVVPYFSGIEHLELGANYYIGVTVDTPVQDFKQAILPIHTVRFFEEEQLE
                     SLQVLHAIRDNIPLNQVADIDSRQKLLSADSLTNLFSNRFPQAVDNLRDLVAGISYQL
                     NTDLKLPRFNRDRPAVEELYERSYQGLEEKGLTNSLYKERLEKELSIIHQMGFDDYFL
                     IVWDLLRFGRSQGYYMGMGRGSAVGSLVAYALNITGIDPVKHNLLFERFLNAERYSMP
                     DIDIDIPDIHRADFIRYVRDRYGSTHAAQIVTYSTFGAKQAIRDVFKRFGTPEYELSN
                     ITKKISFRDSLTSAYQRNAAFRQIINSKIEYQKAFAIAQQIEGQPRQTSIHAAGIVMS
                     DEDLTDTIPLKIGDDMLVTQYDAHAVEANGLLKMDFLGLRNLTFVQKMAEGVRERYQQ
                     EIDIAKIDLEDKKTLELFAAGRTKGIFQFEQPGAISLLRRVKPGRFEDIVATTSLNRP
                     GASDYSDNFVKRKHGQEAVDLLDPTIAPILQPTYGIMLYQEQVMQIAQVYAGFTLGKA
                     DLLRRAMSKKNAQEMQAMEAEFLQGALKNGHAEENAREIFGMMAKFAGYGFNRSHAYA
                     YSALAFQMAYFKSHYTDVFFDVMLNHSSSAYIEDAMQFDFEVARLTINNIPYHDKFDK
                     SKVYLGLKTLKGLPKDLALWILDHRPYKSVEDFILRLPDNFKKKDLLIPLIQIGLFDD
                     FDANRKKIIENLDNLFVFAEAIGTFFAEESYSWTDVEDYSDSEKFMLEQELLGVGISP
                     HPLVTICRESKRSFTDLADLAVGNRATVLVQIQAIRLIRTKKTGEQMAFLRVTDTKRT
                     LDVTLFPESYRQYASILEEGGMGYITGRVQERDGQLQLVLEKLEPVSLEKFWILLENR
                     EHDYAVARILDKYRGSIPVVLHYQDSNQTIQAEHHMVMKTPQLEEELSEFVMKTIFR"
BASE COUNT         3156 a         2478 c         1954 g         3495 t
ORIGIN      
        1 tccgctattt ctgatatcgt tgctttacaa aaacaatcta ttaaaaaggt ttatttcgac
       61 aaattttaaa tattatctta acgaacaaaa ctacgaagga aacttgattc taatttgaat
      121 gatttactct ctacaatatg cttgtgtgtt ccgtgaggaa ttttgctaat aatttcaaca
      181 tggaaatctt ctgagccaac caaatcctca tctgtcaaat tagcgacata ggagcctgat
      241 tctgtgcgta caagtggaat aatgttgtat tcacctaaaa caaaataaac atctggtgct
      301 tctacataag gtgtttttag aaaaacttct acttgtgcac ctggaacacc agtttgttgt
      361 gtcaatttta cattcacaaa tgaattgcga gtgtaattgg ctgtttctct tgtcttgtat
      421 tttacgtaag tatttgattc agctgtatta gcgctaacaa caggagcaag cgctgtaaga
      481 cctgtactca tgcaggctac tgaaagcatg gcaaaattct tcattttctt tgaaaagttc
      541 ataacatttt ctccaatttc tattatctta tattcatatt acccaaactc aaactataaa
      601 atggtaatat gacagtacta cccaatcggg attattgttt taggtcgtaa caaatttttt
      661 gaatgcattc gattgattgt tacaagataa tcttaattga aatctctgtg tgtcgcaaca
      721 gattttcccg attttttatc tgtttttcat gagtttttct ggcagtcctt agataatttc
      781 ctaatatcca cagctctgag attatgagaa acggtagtgg gaaagaagac gactggacaa
      841 aaatagatgt tgacgcgaat aaaaagcgag gctggatttt atgcccagcc tcgtttccat
      901 taacaatcat attaaaatga gttaattttt aacaaatttt aaaccttatc ctagcgacgg
      961 aaacttgggt ccaatttgaa tgatttattc tctacaatgt tcttcgctga accgtaagga
     1021 attttgctaa taatctcaat gcggaatttc tttgcacctt ttaaatctgc atccgtcaaa
     1081 ttagctgcat agtctccaga tggtgtttga tcgagtggga taacatagtt ttcacccaaa
     1141 ataaagtaaa catctggtgc ttctgcatat ttttgtttta gttttacatc tactcgtgca
     1201 cctggaatac ctgttttttg tgacaatgtc acatccacag ctgagctgcg acggtaagta
     1261 acagtttctt ttgtactata ttttacgtaa gtatttgatt cagatgtatt ggcgctaaca
     1321 acaggagcaa gcgctgtaag acccgtactc atgcaggcta ctgaaagcat ggcaaaattt
     1381 ttcattttct ttgaaaagtt cataacagtt tctccaattt ctattatctt gtatttatat
     1441 catttacact caaactataa aatagcaata tgatgaacta atcctactag aatagtttcc
     1501 ttagtccgta acaatttttt tcgaatgcac tctattgatt gttacaagat aattttaatc
     1561 gaactccccg cttatagcaa tggattttcc cagcttttta tctatttttc atgagtctta
     1621 atatacttcc gaagtaaatt ttacgataga tggtcgctaa ttatttactc tctaatcctt
     1681 gattattgct ttttacttgc tttttttaat agtccccaaa cactaccaag caagagagtt
     1741 aataggctaa ttccaacaat ctgcccagaa gcatttgtca ttgtttttga agattgttcc
     1801 acacttaaaa cttgctttgt atctattttg gagtgaacag cctgattctg accatatttt
     1861 ctcgtattat ttgaggattg agagatacct cctacaatta ccttaggttc agctgactca
     1921 tctagatcag tctctttgta gcccttgtcc atttctatac tggacatctg aggctctctc
     1981 tctggaactt ctggcaatac aatctcctga gaactcatat ccattttaac actgtccaat
     2041 gatttggatt tagggaccaa gattctttct gtactctcca aatcactcat caatttattc
     2101 ggctgaatca cctttgtttc tgttaggatt gaagacctat ctgcttcagc caggatgctt
     2161 tctgtcgttg cttctgtcag aaactcaact tgaggaacat tcgactcatt ggcagccccc
     2221 tcagaaccca ctttcaacgt ggaagaaact tcgccatcta caaacttgtg tttttcagaa
     2281 atagtagata atttagctac tgattcggcc acacgaattg ctgaatgccc aggtaaagct
     2341 ggaatatcct cagcaacagg aactaaagtg gcttcatttt tggcgacact ctcactttct
     2401 acaccagctg attcgtcgag agatgcttgg actactgggg cagagacggt ttctggcaat
     2461 acaacaggag gaatatcagt ttctcctacc tccacagcga cttctggttg aacgggaata
     2521 gctgacctgt ctggagacga aatcggggct ggttggaaga cggtttcact ttctgcacta
     2581 gctgattcgt cgagagatgc ttcgactact ggagcagaga tggtttctgg taatacaaca
     2641 ggaggaatat cagtttctcc tacctccaca gcgacttctg taacttctgg tggaaaggga
     2701 atatctaatg tgcctggaga cgaagttggg gatgtttggg cgacggtttc actttctgca
     2761 ccagctggtt cgtcgagaga tgcttcgact actggggcag agacggtttc tggcaataca
     2821 acaggaggaa tatcagtttc tcctacctcc acagcgactt ctgtaacttc tggttgaacg
     2881 agaatatcta atgtgcctgg agacgaagtt ggagctgttt gggtgacggt ttcgcgttct
     2941 gcactagctg attcgtcgag agatgcttgg actactgggg cagagacggt ttctggcaat
     3001 gcaacaggag gaatatcagt ttctcctacc tccacagcga cttctgtaac ttctggttga
     3061 acgggaatat ctaatgtgcc tggagatgaa gttggggctg tttgggtgac ggtttcgctt
     3121 tctgcactag ctgattcgtc gagagatgct tgaacagttg tagttttgga ggtggttggt
     3181 tgttcagtag cggtcgtcgc aacttgatct tcttttacgt ttaccccctc catgcctaag
     3241 ggacctgata gaagttctga cctctgattc tcaactgttt ctgattcaag aggttcttcc
     3301 acagggacta cctcatcatt tttcacagca tcttgatcaa ctactactgg tagatcgctc
     3361 ccctctactt gaattccctc ccctaaagct atagttgact ggctctggtt ttcattagca
     3421 actaactgtt catcatttac tggttcacca atgactgcta caggcaatat cgcctggtcg
     3481 tccactggta agacgggttg attgatacta tctacaacaa gggcaatatt cccttcttct
     3541 tctttcccat ctgcagagag gatttcttga gatagctgag aattttcagc tgcattgggc
     3601 gaaagctcgc ctgctggcaa ctctgctgtc aaagcttctc caactgctga catagggaag
     3661 tctaaacttt ttaaactatc ctctaacgca acattaagta gctcggagct ttctgctttt
     3721 tgaatggcta acacaccttg atcatatagc ctatctaact tttcaagata tgttacacgt
     3781 gccgattctg gcaattcaga ttgtccttga atagacagaa ccaacgcctt ctttctatca
     3841 gctagtatct gactagctat ttctttggct tttgcgagcg gattgaaata ttcttcccat
     3901 aagtcttgac caagacggat tgtatggaca taatccaaaa gcgctccagc tgaattattt
     3961 ttcacatgat tattcaaacg tggatttcca gaagcatcac gagtgattcc catacgcttc
     4021 aaaccaattt gttcttgttg atcatcagaa tcagtgatat agacagccct aatcttacct
     4081 tgattatcgt actcagcacc ccataccgtc acaatatgcg ttgcatagcc taatgttcta
     4141 taagttagac cgagtaatcc tttgctctcc aaaacagttc gaacatcctc accaaaacgc
     4201 tcatagctac cactgaaaat acgatttgtc agttttttct ctttgaaaac gtcgtagaaa
     4261 aagccacccc tactatctgg tactaactgg ctatcttcca gattgacacc accctgtacc
     4321 ttaggtttat atccattaat aaacaagtca actaaggcat ctgacacaaa accatttgta
     4381 cgataaccgt agtaagtttt gaacatatca aagactcgac tattttgctg atcctggaac
     4441 gaatcaatat agcgacgtag gtccgttatt gcatagtttt ccccaacatt tactgtacta
     4501 tttttttcct tgagatatcg ctcaacatag gaactattct gttccaacca ccaatgtacc
     4561 atgttggaag acacggctgc aaaacatagg ttaaggtcaa taaatgaagc atcgagactt
     4621 ttattggtat cataatagcc ttttcctgcc tcaaatggcg ctgtatagtt taaatagtct
     4681 ccatactttt cctttacaaa accaccgctt tgttccattg caggaggggt aattccatga
     4741 gcccatataa tttgtcgttg ctcgccactc tccgtttgat aactggtctg attcactttt
     4801 gtctcagcaa cctctatctg attttgctcg ctcgtcgtaa cttctttatc atttctagaa
     4861 actacattct cggtccctcc gtcaactttc atctctaccg ctatttctcc ttcagcgata
     4921 acaggtgatg ggatgttgtc tgctatttcc tctacaattt caagattaga accatctagg
     4981 gattcatttt tttctgattc aatagatgcc tcatctttga cttgtgattc ttcaattatt
     5041 tcattcactc ctgtaacaac tgtatctgca gcaacagtgg atgtatgaat agcacatagc
     5101 aaagagactg agaccaagcc aaccgctgat tttctcaaag aaaatcgttc ttgaatgttc
     5161 atctttcctc cgtttatcat caaaaatttg aataaactat tctatttacg acttattttt
     5221 atttccacat cccccaagaa aatatttata aacaagcgtt tgaaagaaat tcagatatag
     5281 tctatttcca taatcacgac aaaaaggtcc aagaggacct ttttgattat tttactgtac
     5341 gaacacgcat agtgtttgtt gaacctgcaa cacctacagg cacaccagca acgataataa
     5401 tatcatctcc tgcttcaaca agaccttgct ctttggcaat acgttcagcc aaatcaaaca
     5461 tatcgtcagt tgaatctgga cgttttgtta caactgggat aacaccccag ttaagcatca
     5521 atgatttttg tactttctca gtaaatgtta ctgccaagat gtcagcatct ggacggtatt
     5581 tagagattga acgagctgag taaccagttt cagtaactgt tacaaccaac ttgatgttca
     5641 ttgagtgaca agcatctttt actgcagatg caataacttc tgttttagat gcacggttaa
     5701 agtgatcaga gttcaaacga ccgtattcgt taagaagagt ttgtgcgttt ttagcaatag
     5761 ttgccattgt acgaactgat tcaactggat atttaccgtt tgcagactca cctgaaagca
     5821 ttgttgcgtc agtaccatcg ataactgcgt tgaatacgtc tgatacttca gaacgagttg
     5881 cacgtggttt ttcagtcatt gtttccaaca tgtttgttgc tgtgataact gctttaccag
     5941 ctgcattcac tttagtgata atcatttttt ggtaaactgg aaccatttca aatggtactt
     6001 cgatacccat gtcaccacga gcaatcatga taccatctgc tgcttcgatg atttcgtcga
     6061 tgttgtcgat accttgttgg ttttcgattt tcgcaaacaa ttgaacgtga tcgttaccag
     6121 tttctttaca gatgttacga acaacttcta catcttttgc agtacgtaca aatgagatgg
     6181 caatgaagtt caaaccttgc tcaagaccga atcggatatc tgcgttatca cgctctgcaa
     6241 gagctgggaa aggaatttta gtgtaaggaa tgttcacacc tttttgtttt gcgataacac
     6301 cgtcgttttc aacttcaaca acaaattcac gtttttcagc atctttttcg atgactttaa
     6361 gaccaagttt accatcgtca acaagaactt gtttaccaac ttcaacatcg tcaaatacat
     6421 ccaaaccacc agcaacgttc aatgcaataa catcgcgagt tgatttaatg ccttgtttag
     6481 ttgctacgcg gattttttca ccagttgtgt atgaaaactc ttttgcatcg ccttcaaaca
     6541 attctgtacg gatttctgga ccttttgtat ccaacaagaa acctactttt ttaccagcga
     6601 tttcttctgc acggcgaact gttgccatac ggtcaccttg ctcttgatgg tcaccgtgtg
     6661 agaagttgaa acggaaaaca ttagcgcctt ctgtaatcaa agcagcgatt ttctgtgctg
     6721 atgcctcaac atccaatttt tcaccccagt aaccatcgtc accgaatttt ttaccaccgc
     6781 ggatttctac cgctggacca agggttgcaa caattttaac acgtttgttc atcttaacaa
     6841 aactcctttt atttcaatgg tcttatgacc cttaattaac actttaaaac aacgatgcct
     6901 agattgacaa attacggttc aaatcagcca attccaaatc tgctttatgc ggattattaa
     6961 ccacaatctt accgtcagca gtcaagctga acaatgctcc ttcttctgca gttccaagaa
     7021 ttggattttc aaccatttgc tcgttacgga tacctactgc aagacctcca cggccttctt
     7081 taagcaattt aacggcatga gcacccatac gagaagcgag tacgcgatca cgcgctgttg
     7141 gagaaccacc acgttggata tgaccaagtt ctgtcacacg aagatcactt gtatcgcctg
     7201 ctgctttcaa ttcttcagca aactgtgcag ctggcataac accttcagct aaaacaatga
     7261 tgctatgttt cttaccattg tcgtagcccg ctttaatacg gtcaacaata tcgttgatat
     7321 tgaagtcttc ttctggaaca acgataacat ctgcaccaga agcaatacca gcccaaagag
     7381 cgatgtctcc cgcatgacgt cccattactt caacaacgaa agtacgacgg tgacttgatg
     7441 aagtatcgcg gattttatca atcgcatcca tagcagttgt tacagctgta tcaaaaccga
     7501 ttgtaaaatc tgtacccacg atgtcgttat caattgtacc aggtacacca atagctggga
     7561 aaccatgctc cgtcaagcgc attgcaccgt ggtaagaacc atcaccaccg ataacaacta
     7621 caccttcaat accatgtttt ttcaattgct caatcccttt aagttgccct tctaatttgg
     7681 caaattctgg ataacgagct gaaccaagga atgttcctcc acgtgaaata atatcaccta
     7741 cagaacgtgc agacaattca tggatatcac ccgcaaccat acctgcgtaa ccttcgttga
     7801 ttccataaac ttccattcct tctgaaattg cttggcgaac aactgcacga atagcagcgt
     7861 tcataccagg ggcatcacca ccactggtca aaacagcaat acgtttcatt cgttaatgct
     7921 cctttaactt ttcattttaa ctgccctatt ataacatact tagcctaaac ttgcttgact
     7981 ttttgctatt tttttatcga aaaatcgttt tcataacaaa ttcacttaac tcttcttcta
     8041 attgaggcgt tttcataacc atgtgatgct cagcctgaat tgtctgatta ctatcttgat
     8101 aatgaagtac tactggaatg cttcctctat atttatccaa aatacgagca acggcataat
     8161 cgtgttctcg attttccaaa agaatccaaa atttctccaa actgacaggc tctaattttt
     8221 ctagaaccaa ttgcaactgt ccatcgcgct cttgcactct acctgtgatg tagcccattc
     8281 ccccttcttc caaaatagaa gcgtattggc gataagattc tgggaaaaga gtcacgtcaa
     8341 gcgtcctctt ggtatctgtc actcgaagaa atgccatctg ctccccagtc tttttggtac
     8401 gaatcaatcg aatagcttga atctgcacaa gaacggtcgc tcgattgcca accgctaaat
     8461 cagccaaatc tgtaaaacta cgcttagact ctcgacaaat agtgactaaa ggatgcggac
     8521 taataccaac acctagcaat tcctgctcta gcataaattt ttcgctgtca ctgtaatctt
     8581 ctacatctgt ccaactataa ctctcctctg caaaaaatgt accaatcgcc tctgcaaaga
     8641 caaagagatt gtctagattt tcaataatct ttttacgatt ggcgtcaaaa tcatcaaata
     8701 aaccaatctg aataagaggg attagtaaat cttttttctt gaaattatct ggcaagcgca
     8761 aaataaaatc ttctacagac ttatagggac gatgatccaa tatccacaaa gctaaatctt
     8821 taggcaaacc ttttagtgtt tttaatccta ggtaaacctt acttttatca aacttatcgt
     8881 gataaggaat attgttaatc gtgagtcgag ccacctcaaa gtcaaactgc atcgcatctt
     8941 caatataagc actgctagaa tgattgagca tgacatcaaa aaagacatcc gtatagtgac
     9001 tcttgaaata agccatttga aaggctaagg ctgaataagc ataggcgtgg ctacggttaa
     9061 aaccataacc agcgaactta gccatcatgc caaatatttc ccttgcattc tcttcagcat
     9121 gtccgttttt cagtgctccc tgtaaaaatt ccgcttccat tgcctgcatt tcttgggcat
     9181 tctttttaga catcgccctg cggagtaaat ccgcctttcc aagcgtaaag cctgcataga
     9241 cctgtgcaat ctgcatgacc tgttcctgat aaagcatgat accataagtc ggttgtaaaa
     9301 taggagcaat ggttgggtcc aacaaatcaa ctgcctcttg tccatgcttg cgttttacaa
     9361 agttatccga ataatcacta gcccccggtc tattcaaact cgttgttgca actatatctt
     9421 caaatcgacc aggtttgacc cttcgaagca ggctaatcgc accaggctgt tcaaattgaa
     9481 aaattccctt agttcgacca gcagcaaaaa gttccaaggt tttcttgtct tctaaatcta
     9541 tcttagcaat atcaatttcc tgctgataac gttcacgtac tccttctgcc attttttgca
     9601 caaaggtcag atttcgtaag ccaaggaaat ccatcttcaa cagaccattc gcctcaacag
     9661 catgtgcatc atattgggtt accagcatgt catcccctat tttaagaggg atggtatctg
     9721 tcaaatcctc atcactcatc actatccctg ccgcatggat agaagtctgt cggggttgcc
     9781 cttcaatttg ttgagcaatc gcaaaagctt tttggtactc tatcttacta ttgataatct
     9841 gacgaaaagc ggcatttcgc tgataggcag aagtaagact atctctaaat gaaattttct
     9901 tggttatatt acttaactca tattcaggtg ttccgaaacg cttaaataca tcacgaatgg
     9961 cctgcttagc tccaaatgtc gagtaggtta caatttgagc agcatgggtt gaaccataac
    10021 gatctcgtac ataacgaata aaatctgctc gatgaatatc tggaatatca atatcaatat
    10081 cgggcattga ataacgttca gcattgagaa agcgttcaaa gagaagatta tgcttaactg
    10141 gatcaatacc tgtgatattt aaggcgtagg caactaggct tccaacagct gaaccgcgcc
    10201 ccattcccat gtagtacccc tggctacgtc caaaacgaag taggtcccat acaatcaaga
    10261 aataatcatc aaatcccatt tgatgaataa tggataattc cttttccaag cgttccttat
    10321 acagtgaatt agtcaagccc ttctcttcta atccttgata ggagcgctcg tataattctt
    10381 ccactgcagg tctgtcacga ttaaaacgcg gcaattttaa atctgtattt aattgataag
    10441 aaatccctgc aaccaagtca cgtaaattat caactgcttg cggaaaccga ttagaaaata
    10501 gattggttaa gctatcagcc gataaaagct tttgtcgact atctatatct gcaacttgat
    10561 taagtggaat attatctcga atagcatgta gaacctgcag actttccaat tgttcctctt
    10621 caaaaaaacg aaccgtatga attgggagta ttgcttgctt aaagtcttga actggtgtat
    10681 caaccgtcac tccgatataa tagttagcac ctaactcaag gtgctcaatg ccagaaaaat
    10741 aaggaacaac cactgctatg tcgactaaat attgacgaat agtttcaaaa tcatcttgcc
    10801 ctgtcatctt agcagtcgaa attttcaata gattgcgata acctctggtt gtcagagcaa
    10861 tcaattgagt agtgatgccc tgctcctctc cctgtaattt ccagtccagt tcacaaccaa
    10921 taattggttg aagccccatt ttgttacagg attccataaa actataggct gcataaagac
    10981 tgtttttatc cattatcccc aatgcgtggt aaccaagctc tttagccttg cctacataat
    11041 tttctatcgt caccatgcta tccataaagg tataaactgt ctt
//
LOCUS       DBNFCX010000075        11034 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.075, whole genome shotgun sequence.
ACCESSION   DBNFCX010000075 DBNFCX010000000
VERSION     DBNFCX010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 11034)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11034)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11034
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.075"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            39..1184
                     /gene="nagA"
                     /locus_tag="AC1PJC_001704"
     CDS             39..1184
                     /gene="nagA"
                     /locus_tag="AC1PJC_001704"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008448 - N-acetylglucosamine-6-phosphate
                     deacetylase activity [Evidence IEA];
                     GO_process: GO:0006044 - N-acetylglucosamine metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HIP6620685.1"
                     /translation="MTVFIKAKSIILPESEVESAYLEITDKGQFGRIVTEKPEGEIVD
                     YSDFHLAPGLVDTHIHGYASHDVMDNDFEGIKVISEGLLSCGVTSWLPTTLTDTTENL
                     DAVCETIGTYAGQETGAKIQGIFLEGPFFTEKYKGAQNPKYMSDPSIEKLDNWHSLSK
                     GLVNKIAIAPEREGVKEFIEFANSKAIHTALAHSDATYTQAEAAVEAGANIFVHVYNG
                     MSGLHHREPGMVGAALNLKNVYAEMICDGHHVHPAAAEIVVKARGAEETVLITDCMRA
                     GGMGEGESRLGEFEVVVKDGTARLKESGSLAGSILELIEAVQNVVKWGLVSLPDALRM
                     ASLAPARSVNIDHICGRIAEGRAADFIVVDDAGRLQATYLDGVKRFG"
     gene            1207..2208
                     /gene="lacD"
                     /locus_tag="AC1PJC_001705"
     CDS             1207..2208
                     /gene="lacD"
                     /locus_tag="AC1PJC_001705"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009025 - tagatose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0019512 - lactose catabolic process via
                     tagatose-6-phosphate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase"
                     /protein_id="HIP6620686.1"
                     /translation="MTKLQLSQAKFNHMTRLSNSDQVIAALAIDQRGALKRLLAAAAG
                     GGEFGDDILIDFKKVISSDLTPYASSILLDAEYGVPASELRHADCGFIAAYEKTGYDA
                     STPGRLPDLLPNWSAKRIKELGADAVKILLYYDVDDKPEINDIKHAWVERIGSECIAE
                     DIPYFVEILTYDASDMDVTSREYAALKPHKVNGAMREFSKSRYNADVLKVEVPVNMNF
                     VEGYTDEEPVYTVEEAKAFFKEQTDSTHLPFIYLSAGVSAKLFQETLVFAKEAGSSFN
                     GVLCGRATWKDAVAIFASEGEEAAKAWLADQGRRNVEELNEVLATTARPWTEKVEVK"
     gene            2934..3893
                     /locus_tag="AC1PJC_001706"
     CDS             2934..3893
                     /locus_tag="AC1PJC_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIP6620687.1"
                     /translation="MGFKKIILSSVALLSAVTLAACSSNSSDSSSVNVGIIQYAEHEA
                     LSSAREGFVEALEEAGYKEGENLTIDLQNAQGDQANLQTMVEKLAGKNDLNFAIATPA
                     AQAMLNADSETSSVFTAVTDPVEAGLVESLEKPGGTMTGSTDATDVEGQIEMLLKVVP
                     TAKTVGIFYNSSEVNSEVQAEQAKKALEAKGVKVEVTTVTTTNDVQQAITSLAGKVDA
                     IYLPTDNTVASTASTIGDILKEAKVPAMGSDAAVIDAALFTYGVDYHAIGVQAGELAV
                     KILKGEKPADLAVEKPNTAAITVNEEMAKAVGIDAATIKALEE"
     gene            3917..4891
                     /locus_tag="AC1PJC_001707"
     CDS             3917..4891
                     /locus_tag="AC1PJC_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIP6620688.1"
                     /translation="MYYKLVKKLATISVASMGLLTLAACSSSSEQASSDVVKVGVLQY
                     MEHESLTAAREGFVAELEANGYKEGEKLVLDYQNAQGDQANLQTISEQLIDGNDIVLA
                     IATPSAQSLATVSTETPIVFTAVTDPLSADLVESIEKPGGLLTGTSDQAPIDKQVELL
                     GQAVPDAKTVGILYTTSERNSEVQVEQARELLEKAGYKVVVKGITSTNEVQDATTSLM
                     KDVDALFIPTDNTVASTMTMIGELSVEHKVPVIGGSTDMVDEGGLLTYGTNYEALGRQ
                     TAKMAIKIIEGANVSETAVEYPETVSLHVNEEMAQKLGIDTSKLAVSE"
     gene            4946..5839
                     /locus_tag="AC1PJC_001708"
     CDS             4946..5839
                     /locus_tag="AC1PJC_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIP6620689.1"
                     /translation="MDIILSSISQGLLWSVMAIGVYLTFRILDIADMTAEGSYPLGAA
                     VCATGIVNGVNPLLATFMAMVAGMGAGLISGLLHTKLKIPALLTGIVTLTGLYSINLK
                     ILGKANVALLKQETLVTQLQDFGLTKTNAVLVIGLVFVLAVVGLLTLLLNTQIGLAIR
                     STGDNIPMSEANGINVDNMKIYGYMLSNGLIALCGALLTQNNGYADLNSGTGTIVIGL
                     ASVIIAEVILRNLRLGWRLLSVVLGAVVYRLIILAILEIPGMDADLVKLFSAILLATV
                     LYVPELQKKLNIRRPKLNGNA"
     gene            5849..6649
                     /locus_tag="AC1PJC_001709"
     CDS             5849..6649
                     /locus_tag="AC1PJC_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6620690.1"
                     /translation="MSTILSIQNIHKTFEAGTVNENHVLRGLNLDVKEGDFISIIGGN
                     GAGKSTFMNSLAGALTVDSGDILLEGKSIKHVSAAKRSKDISRVFQDPKMGTASRLTI
                     EENMAIAYRRGLSRGLGWGVKDSERAIFKEALKELGLGLENRMKVDTQFLSGGQRQAL
                     TLMMASLVKPKVLLLDEHTAALDPKTSDMVMELTKKIVESHQLTALMITHNMENAIEY
                     GNRLVMLHRGQIVVDVEGEEKKNLTVQNLMDLFYKNSGEKLTDDEMIL"
     gene            complement(7005..8072)
                     /gene="aroB"
                     /locus_tag="AC1PJC_001710"
     CDS             complement(7005..8072)
                     /gene="aroB"
                     /locus_tag="AC1PJC_001710"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HIP6620691.1"
                     /translation="MKLTVNLPHNPYDILIQRGSLAQTGTWVKELWKPQKIAIITDDH
                     VGSLYRETVQSSLEQAGFETIVFEFPEGEASKNLDTVNQAYEFLVKNGMTRSDGIIAL
                     GGGVVGDLAGFVASTYMRGIHFLQIPTSLTAQVDSSIGGKTGVNTPFAKNMVGTFCQP
                     DGVLIDPDTLKTLDKRELIEGMGEVVKYGLIDDVELWETLDQLDGSVESILEHADYIV
                     YHSCEVKRKVVVEDELDNGVRLYLNFGHTIGHAIEATAGYGKVMHGEAVAIGMVQISR
                     AAEKKGLMPAGMTEKIIAMCEKFGLPTTHQPWNVDELYAALTHDKKARGKTIKLVIVP
                     QLGQAAIHQIPMEEMLEFLQV"
     gene            complement(8085..8954)
                     /locus_tag="AC1PJC_001711"
     CDS             complement(8085..8954)
                     /locus_tag="AC1PJC_001711"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HIP6620692.1"
                     /translation="MNIDGYTRLAAVVAKPIKHTISPFIHNLAFKETGVNGVYVALEI
                     PEEDLAATLENIKRYDMFGINLSMPYKQAVIPYLDDLTASARLIGAVNTVIHQNGLLI
                     GHNTDGIGFFKSLEKLRGFQVRNKRLTILGGGGASTAIIAQAALDGAKEITIFCRQQS
                     LERTQASIALITQATGVPMRVLANDDSPLMQEEITKSDLLVNGTSVGMDGVSLPVPAS
                     LQFPEKLLVADVIYQPFETPLMKLAQSQGNPTINGLGMLLFQAAEAFQAWTGKEMPTD
                     FIWDQLVQKYDIK"
     gene            complement(9000..10025)
                     /locus_tag="AC1PJC_001712"
     CDS             complement(9000..10025)
                     /locus_tag="AC1PJC_001712"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HIP6620693.1"
                     /translation="MGIHKRSTSLDIDKVKELSKLEGEFLAAKNQRDEELKRIIRGED
                     DRLLLVIGPCSSDNEEAVLEYARRLSKLQEEVKDKIFMVMRVYTAKPRTNGEGYKGLV
                     HQPDTSKLPDLINGIAAVRNLHYRVITETGLTTADEMLYSANYPLVEDLVSYHAIGAR
                     SVEDQEHRFVASGVDMPTGMKNPTSGNLTVMFNGIYAAQNKQNFIYRDAEVDTDGNPL
                     AHAILRGANTEKGGYEPNYYYDILLKTIKQYEQFGLKNPFIVIDTNHDNSGKNYLEQI
                     RIVRQTLINRDWSEAIRKYVRGFMIESYLEDGRQDSPEVFGKSITDPCLGWEKTEALI
                     REIHQTV"
     gene            complement(10035..>11034)
                     /locus_tag="AC1PJC_001713"
     CDS             complement(10035..>11034)
                     /locus_tag="AC1PJC_001713"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HIP6620694.1"
                     /translation="KIDIDQVREHSKLSPETLAKKQARDRELEAILKGEDDRLLLVIG
                     PCSSDNEEAVLDYAHRLAKLQEEVKDKIFMVMRVYTAKPRTNGDGYKGLMHQPDTDAA
                     PSLINGIKAVRNLHYRVITETGLTTADEMLYPENLPLVDDLVSYIAIGARSVENQQHR
                     FVASGIDVPTGLKNPTSGNLKVMFNGLFAAQKKQSFLFNNTEVETSGNPLAHVILRGA
                     VNENGKYLPNYYYDNLLETIELYDQFGLKNPFIIIDTNHDNSGKNYLEQIRIVRQTLI
                     NRDWNEAIRNYVRGFMIESYIEDGRQDNPDVYGKSITDPCLGWEKTQELIREIYNR"
BASE COUNT         3122 a         2134 c         2559 g         3219 t
ORIGIN      
        1 ccagtttgat aaatatatat atcaacaaag gagataatat gacagtattt ataaaagcaa
       61 aatctattat tttaccagag agtgaggtcg aatcagccta tttggaaatt actgacaagg
      121 gtcagtttgg acggattgtg actgaaaagc ctgaagggga gattgttgat tattctgact
      181 ttcatttagc accagggcta gttgatacac atatccacgg ctacgcttct cacgatgtta
      241 tggacaatga ttttgaaggg atcaaggtaa tttcagaagg tctcttgtct tgtggggtga
      301 cctcttggct tccaacgaca ttaacagata cgactgaaaa tttagatgca gtttgtgaaa
      361 cgattgggac ttatgcaggg caggaaacag gcgccaagat tcaaggtatt ttcttagaag
      421 gtcccttctt tacagaaaaa tacaagggag cacaaaatcc taagtacatg agcgatccgt
      481 ccattgaaaa gttggacaac tggcacagct tatctaaagg tttagtcaat aaaattgcta
      541 ttgctccaga acgtgaaggc gtcaaagaat tcatcgagtt tgctaacagc aaggcaattc
      601 atactgcctt ggctcacagc gatgcgacct atacgcaagc ggaagcggca gtagaagctg
      661 gtgccaatat cttcgtccat gtttacaatg ggatgagtgg gcttcatcac cgtgaaccag
      721 gtatggtcgg tgctgctttg aatttaaaaa atgtctatgc ggaaatgatt tgtgatggac
      781 accatgttca tccagctgcg gcagaaatcg tggtcaaagc acgtggagca gaggaaactg
      841 ttttgattac ggactgtatg cgagctggcg gtatgggtga aggggagtcc cgcctcggtg
      901 aatttgaagt tgttgtaaaa gatggaactg ctcgtttaaa agaaagtggt agtttggcag
      961 gttctatctt agaattgatc gaagcagtgc aaaatgttgt gaaatggggc ttggtatccc
     1021 tacctgatgc ccttcgtatg gcttctctgg caccagctcg ctctgtcaat attgaccata
     1081 tttgtggtcg gattgcagaa ggccgagctg cagactttat cgtcgtagat gatgcaggac
     1141 gcttacaagc gacctatcta gatggcgtga aacgatttgg ttaataaaat ccttaggagg
     1201 aaactaatga caaaattaca actttctcag gctaaattca atcacatgac ccgcttgtca
     1261 aacagcgatc aggtgattgc ggccttggcg attgaccaac gtggtgcatt gaaacgcctg
     1321 cttgcggctg cagcaggtgg tggcgaattt ggagatgaca ttttgattga cttcaagaaa
     1381 gtcatctcaa gcgatttgac tccttatgca agctccattc tcttggatgc ggaatacggt
     1441 gttcctgctt cagaattgcg ccatgcagat tgcggtttca ttgcagctta tgaaaaaaca
     1501 ggttacgatg cgtccacacc aggtcgtttg ccagaccttt tgccaaattg gtcagcaaaa
     1561 cgcatcaaag aattgggggc ggatgccgta aaaatcttgc tttactatga tgtagatgac
     1621 aagccagaaa tcaacgacat taagcatgct tgggtagaac gcattggtag tgagtgtatc
     1681 gcagaagata ttccttactt tgtcgaaatc ttgacttacg atgccagtga tatggatgtg
     1741 acttctcgtg aatacgcagc cctcaaacca cacaaggtca atggtgccat gcgtgaattt
     1801 agcaagtcac gttataatgc agacgtgctc aaggttgaag tacctgtcaa catgaacttt
     1861 gtagaaggct acacagatga agagccagtc tatacagttg aggaagctaa ggccttcttc
     1921 aaggaacaaa cagacagcac tcacttgcca ttcatttatt tgagcgctgg cgtatctgct
     1981 aaacttttcc aagaaaccct tgtctttgcc aaagaagcag gttcaagctt taatggtgtc
     2041 ctttgtggtc gggcgacttg gaaggatgca gtagccatct ttgcaagcga gggggaagaa
     2101 gcagccaaag cttggttggc ggatcaaggc cgccgcaacg tagaagaact caacgaggtt
     2161 ctagcaacta cagcgcgtcc ttggactgaa aaagttgaag taaaataatt gttttagtag
     2221 ggtctgggct taggttcaga cttttttgtg acatcaaata tagtcattta actcttcgaa
     2281 aatcaaaatc agtcgatgtt gacctgattt tgcaatccgc tcttatatct cccaccttga
     2341 acagttcatt tactgtgcaa gcaatcccag aaacaagaaa gcctttagtt atagctgcgg
     2401 ctgttgacgc aaaccttgtt ccccttattt ccaacctctg actatttgtg aagtagttgg
     2461 agcaagtact aaaagtaaac taaaaggcta tataaacatg atgacaggtc gttttatagc
     2521 taataatata ggagtctatt tttagaaaaa ttcgaaaaaa cttgaaaaat ctgaaaattt
     2581 acgcaatttc ctattgacaa ataatttgaa aacagttatg atagttacaa ataaatgagg
     2641 aagggaaaca gagatgttac aaatgtgtca aaatcattca gctaatcata cttatttcta
     2701 cggctatttt agatagtgtt tgtagacatg gtaaacatgg atgcaaacac gggaacgtaa
     2761 agtttgtatc tatgtggctg tagctatttt gacatgtgcc catagatgat acatctaaat
     2821 ggcacggata attcattctg ttttcctata cagatgaaat ataaggaccg tttagagtgt
     2881 agtctaagcg gtcctttctt gtttgctatt atatttataa aaggagaata atcatgggat
     2941 ttaaaaaaat tatacttagt tcagtagcac ttttgtcagc agtaacgctt gctgcatgca
     3001 gctccaattc gtcagattca agttcagtca atgttggtat tattcaatat gctgaacatg
     3061 aagcgttgag ctcagctcgt gaaggctttg tagaagcgct cgaagaagca ggctacaagg
     3121 aaggtgaaaa tctgacgatt gatttgcaaa atgcccaagg tgatcaagca aacttacaga
     3181 caatggttga gaaattggca ggaaaaaatg atcttaactt tgccatcgca acaccggcag
     3241 cccaagccat gcttaatgca gatagtgaaa catcaagtgt attcacagct gtcacagatc
     3301 cagttgaagc aggtttggtt gaatcattgg aaaaaccagg tgggaccatg acaggatcta
     3361 ctgatgcaac tgatgtggaa ggtcaaatcg agatgttgct caaagttgta ccaactgcga
     3421 agactgtcgg tattttctac aattctagcg aggtaaactc agaggttcaa gctgagcagg
     3481 ctaaaaaagc actcgaagca aaaggtgtaa aggtagaagt gacaacagtt acgactacaa
     3541 acgatgttca gcaagctatt acttcacttg caggaaaagt cgatgctatc tatcttccaa
     3601 ctgataacac agttgcctct acagcttcaa caatcggtga tattttgaaa gaagcaaaag
     3661 ttccagctat gggaagtgac gcggcagtta ttgacgcagc tctatttacc tacggtgtcg
     3721 actaccatgc tatcggtgtt caagctggtg aattggccgt gaagattttg aagggtgaaa
     3781 agccagctga cttagcagtt gaaaaaccaa atacagcggc tattaccgtc aatgaagaaa
     3841 tggctaaagc tgttggtatt gatgcagcga ctataaaagc attagaagag taaaatattt
     3901 aggagaagaa acgtttatgt attataagct agtaaaaaaa ttggcaacta tttcagtagc
     3961 aagtatgggt ttgctaacgc ttgcagcttg ttcctcatca tcagaacaag cttcctcaga
     4021 tgtggtcaaa gttggagttc tccaatatat ggagcatgaa tcattgacag ctgcccgtga
     4081 gggttttgtg gcggaattag aagcaaatgg ctacaaagag ggtgaaaaat tggttttgga
     4141 ctatcaaaat gcccaaggcg atcaagctaa ccttcaaacc atttcagaac aattaatcga
     4201 tggaaatgat attgtcttgg caatcgctac gccgtctgcc cagagtttag cgactgtgtc
     4261 tactgaaacg ccgattgtct ttactgcggt tacagatccc ttgtcagctg atttggtaga
     4321 atccattgaa aaaccaggtg gactattgac aggtacttct gatcaagctc caattgacaa
     4381 acaggttgaa ttgctaggac aagctgttcc tgatgctaag acagttggta ttttgtacac
     4441 tactagcgaa cgtaattcag aagtccaggt agagcaagct agggaattgc tagaaaaagc
     4501 aggttataag gtagtagtaa aaggaatcac ttcgactaat gaagtacaag atgcgacaac
     4561 aagtttgatg aaggatgtag atgctctctt tattccaaca gacaatactg tcgcttcaac
     4621 catgaccatg atcggtgaat tatctgtgga gcataaggtt ccagtaatcg gtggttcaac
     4681 ggacatggtg gatgaaggag gtcttttgac ttacggtacc aactatgaag ctttaggtcg
     4741 tcaaactgca aaaatggcta ttaagattat cgaaggagcc aatgtgtcag aaacagcggt
     4801 agaataccca gagaccgtca gtcttcacgt taatgaagaa atggctcaga aattaggtat
     4861 cgatacttct aagcttgctg tatctgaata agatcggtat gatagaacct agtattgact
     4921 acgaatttag aaaaaggaga aaatcgtgga tattatttta tcaagtatct cgcaaggctt
     4981 gctttggtca gttatggcga ttggtgttta cttgacgttt cgtattttag atattgctga
     5041 tatgacagct gaggggtctt atccgcttgg agctgctgtt tgtgcgacag ggattgtgaa
     5101 cggagtgaat cccttgctgg caacctttat ggctatggta gctggtatgg gtgcaggatt
     5161 gatttctggt ttacttcata caaaactaaa aattccagcc cttttgaccg gtattgtaac
     5221 cttgacggga ctctactcca tcaacttgaa aattttgggt aaggccaacg tagccctgct
     5281 caaacaagaa acactggtga cccaattgca ggatttcggt ttgacaaaaa ccaatgctgt
     5341 tttggtcatt ggtctggtct ttgtactagc agttgtgggc ctattgacgc tcttgctcaa
     5401 tacacaaatt ggtctagcta ttcgttcaac aggggataac attccaatga gtgaggccaa
     5461 tggtatcaat gtagacaata tgaaaatcta cggctatatg ttgtcgaatg gtctaattgc
     5521 cctttgtggt gctcttctta ctcagaataa tggctatgcg gatttgaact ctggtacagg
     5581 taccattgtt atcggtctag catctgtcat tattgcagaa gttatcttgc gtaacttacg
     5641 cttgggttgg agacttctat cggttgttct cggtgcagtt gtttaccgtt tgattatctt
     5701 agcgattttg gaaattccag gtatggatgc agaccttgtt aaactcttct cagctatcct
     5761 tctggcaact gttctctatg tgccagaatt gcagaagaaa ttgaatattc gtcgtccaaa
     5821 attgaatgga aatgcttagg aggaagtcat gtctacaatt ttatcaattc aaaatattca
     5881 taaaaccttc gaagcaggga cggtcaatga aaaccatgtc cttcgtgggt tgaacttaga
     5941 tgtaaaagag ggggatttta tctctatcat cggtggtaat ggtgctggta aatcaacttt
     6001 catgaactca cttgcaggtg ccttgacggt tgattcgggc gatattttgc ttgaaggtaa
     6061 atccattaag catgtctcag ctgccaaacg ctctaaggac atcagccgtg ttttccaaga
     6121 tcctaagatg ggaacagctt cccgcttgac cattgaagaa aatatggcta ttgcctatcg
     6181 tcgtggattg tcacgtggtc ttggctgggg tgtgaaggat agtgaacgtg ctatttttaa
     6241 ggaagccttg aaagagcttg gtctgggact agaaaatcgt atgaaggttg acacgcaatt
     6301 tctttcaggt ggtcaacgtc aggccttgac attgatgatg gcttcgctgg tcaaaccaaa
     6361 ggttctgctc ttggacgaac acactgcggc ccttgatccc aaaactagcg atatggtcat
     6421 ggaattgact aagaagattg tcgagagcca ccagttgaca gctctgatga ttacgcataa
     6481 tatggaaaac gccattgaat atggtaatcg tttggtcatg ttgcaccgtg gtcagattgt
     6541 tgtcgatgta gaaggagaag agaagaagaa cttgaccgtt caaaacttga tggacctttt
     6601 ctacaaaaac agtggtgaaa agctaactga cgatgagatg attttataaa aaaataagac
     6661 tactgatgat tttgaatcag tagtcatttt tcttatcttg tcatttagta tttcttttat
     6721 tacttcgacg tgagaggaaa ctccgtttcc ttatttccaa cttcaaacac tctactggat
     6781 tgtttgaact cgccttacct gattttgcaa aagcgacttg ctccgctctt ttatctccca
     6841 ccttgcacag tccattaact gtgcaagcaa tctgggggat acgaatagtc cggtggacta
     6901 ttcgtacctg agcctgaaaa caaaaaagcg aagtacatca gctggtcgcc tagaaacaag
     6961 aaagcattga gttatacctg cggcttttga tgtgaactaa aagactatac ttgtagaaat
     7021 tctagcattt cttccattgg aatttgatgg atggctgcct gtcccaattg ggggacgatg
     7081 acgagtttga tggtcttgcc acgtgctttt ttatcgtgag ttagggcggc gtataattca
     7141 tctacattcc aaggttggtg tgtagtcggc aagccgaatt tttcacacat ggcgataatc
     7201 ttttctgtca taccagctgg catcagtcct tttttctcag ctgcgcgtga gatttgtacc
     7261 ataccgatag caacagcttc accatgcatg accttgccgt agccagcggt cgcttcaata
     7321 gcatgtccaa tcgtgtgacc gaagttgagg tagagtctga caccgttgtc taattcatct
     7381 tcgacaacaa ccttgcgttt gacttcacag gagtggtaga cgatatagtc agcatgctcc
     7441 agaatgctct cgacagagcc gtctaattgg tctagggttt cccagagctc cacatcatct
     7501 attaagccat atttgacaac ctcgcccatt ccttcaatca attctcgttt atcgagtgtt
     7561 tttagggtat cagggtcaat gagaacgccg tctggctggc agaaggtccc caccatattt
     7621 ttggcaaatg gggtgttcac gccagttttt cccccgatag aagaatcaac ttgggcagtt
     7681 aggctggttg ggatttgtag gaaatggata ccacgcatat aggtagaagc gacaaaacct
     7741 gccaaatcgc caacgactcc tccgccgaga gcaatgattc catcacttcg tgtcatgcca
     7801 ttttttacga gaaattcgta ggcctggttg acggtatcaa gattttttga ggcctcacct
     7861 tctggaaatt caaaaacaat ggtttcaaaa ccagcttgtt ctaagcttga ctggactgtt
     7921 tcacggtaga gtgagccaac gtggtcatct gtaataatgg caattttttg aggtttccaa
     7981 agttctttga cccatgtacc tgtctgtgct aaacttcctc tttggataag gatgtcgtag
     8041 ggattgtggg gaagattgac ggtcagtttc atcagatttc ctctctattt gatgtcgtat
     8101 ttctggacta attggtccca aataaagtca gtcggcattt ccttaccagt ccaggcttgg
     8161 aaggcttcag ctgcttggaa aagaagcatg cccaatccgt taatagtagg gttgccttgg
     8221 gactgggcaa gcttcattaa aggtgtttca aatggttgat agatcacatc tgcaaccaag
     8281 agcttttctg ggaattgtag gctggcaggg acaggtaaag aaactccgtc cataccgaca
     8341 ctggtaccgt tgaccagcaa gtctgacttg gtaatttctt cttgcatcaa cggactatcg
     8401 tcgtttgcta agaccctcat gggaactcca gtagcttgtg taattagcgc aatacttgcc
     8461 tgtgttcttt ccaagctttg ttgacggcag aaaatggtaa tttctttggc tccatctagg
     8521 gcggcctgag caatgatagc ggtagaagca ccaccaccac ctagaatggt cagtcgcttg
     8581 ttgcgtactt ggaatcctct tagtttttct aaacttttga agaatccaat gccatcggta
     8641 ttgtgaccga ttagtaagcc gttctgatga atgacagtat tgacagcgcc aatcaggcgt
     8701 gcagaggctg ttaaatcatc tagataagga atgacagctt gtttataggg catggaaaga
     8761 ttgatgccaa acatatcgta gcgtttgata ttttcaagag tagcagccaa atcctcttct
     8821 ggaatttcca aagcgacata gacaccgttt acccctgttt ccttaaaagc cagattatga
     8881 atgaaggggg aaatggtgtg tttgattggc tttgcaacaa cggcagcaag acgagtgtaa
     8941 ccatcaatgt tcatagctta cctccaaatt atttatccta taaaaaatta aggaaagaat
     9001 tagacagttt gatgaatttc acgaatcaga gcttccgttt tttcccaacc caagcaagga
     9061 tcggtaatgg atttgccgaa tacctcaggg ctatcttgac ggccgtcttc taagtaggat
     9121 tcaatcatga aaccacggac atatttgcga atggcttcac tccaatcacg gttgatgagg
     9181 gtttgacgga cgatacggat ttgttccagg taatttttac cagaattgtc gtggttggta
     9241 tcaattacga taaatggatt tttaagacca aattgttcat actgtttgat ggttttcaag
     9301 agaatatcat agtagtagtt tggttcataa ccgccctttt cagtattggc accacgaagg
     9361 atagcatgag ctagagggtt gccatctgta tcaacttctg catcgcggta aataaagttc
     9421 tgtttgtttt gtgcggcgta gataccattg aacataacgg tcaaattacc agaagttggg
     9481 tttttcatac cagttggcat atcgacacct gatgcaacaa atctgtgttc ttggtcttca
     9541 accgaacgtg ctccgatagc atggtaggac accaagtctt ccacaagagg gtagttggca
     9601 gagtagagca tttcatcagc agttgtgagt ccggtctcag taatgacacg gtaatgcaaa
     9661 ttacgaacgg ctgcaattcc gttaatgagg tctggtaatt tagaagtatc tggctgatga
     9721 accagtcctt tatagccttc cccattggta cgtggcttag ctgtgtaaac ccgcatgacc
     9781 atgaagattt tatctttgac ttcctcttga agcttagaga gacgacgtgc atattctaga
     9841 acggcctctt cattatctga tgagcaagga ccgataacca agagcagacg gtcatcttcg
     9901 cctcggataa ttcttttcaa ttcttcatcg cgctgatttt ttgcagctag aaattctcct
     9961 tctaacttgg aaagttcctt tactttatcg atgtctaaac tggtgctacg tttgtgaatt
    10021 cccataatat cttcctatct gttgtaaatt tctcggatga gttcttgtgt tttttcccag
    10081 cctaagcaag ggtctgtgat ggattttcca tagacatctg gattgtcttg gcgaccgtct
    10141 tcaatgtagg attcaatcat gaatccgcga acgtagttac gaatggcttc gttccagtca
    10201 cggttgatta aggtttgacg gacgatacgg atttgttcca aataattttt cccagaattg
    10261 tcatggttgg tatcgatgat gatgaatgga tttttcaaac caaattggtc atagagctca
    10321 atggtttcta gaagattgtc atagtaatag tttggtaggt atttaccatt ttcattgact
    10381 gcgccacgaa gaataacgtg agcaagtggg ttgccagatg tttcgacttc agtattgtta
    10441 aagaggaagg attgcttctt ctgagcagca aaaagaccgt tgaacatgac tttgaggttg
    10501 ccagatgttg gatttttcaa gcctgttgga acatcgatgc ctgacgctac aaagcggtgc
    10561 tgctgatttt caaccgaacg agctccgata gcgatgtagg aaaccaagtc atcaaccaaa
    10621 ggcaggtttt cagggtagag catctcgtca gcagtagtta aacctgtttc cgtaatgaca
    10681 cgatagtgga ggttacgaac agctttgatt ccgttgatga ggcttggtgc agcatctgta
    10741 tctggttggt gcatgagtcc tttataacca tcaccattgg tacgtggctt ggcagtatag
    10801 acgcgcatga ccatgaaaat tttatctttg acctcttctt ggagcttggc caagcggtga
    10861 gcataatcta agacagcctc ttcattgtca gaagaacatg gcccaattac taggagaaga
    10921 cgatcatctt caccttttaa gatggcttca agttcacggt cacgagcttg ttttttagca
    10981 agtgtttctg gagaaagttt tgaatgttct cgtacttgat cgatgtcaat tttt
//
LOCUS       DBNFCX010000076        10737 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.076, whole genome shotgun sequence.
ACCESSION   DBNFCX010000076 DBNFCX010000000
VERSION     DBNFCX010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 10737)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10737)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10737
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.076"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..867)
                     /locus_tag="AC1PJC_001714"
     CDS             complement(<1..867)
                     /locus_tag="AC1PJC_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002263494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HIP6620695.1"
                     /translation="MEQLYHTTELIGIKDKNIKILFILKHQTHLEIRAKLDYDSPGCP
                     HCQGKCIKYDFQKSSKIPILDCQGFPTLLLLKKRRFQCKSCQKVTVAETALVKKNCQI
                     SQPIWEKVTQLHTENMTNIAIARRLHISVSIVQRKLAQFQFEHDFTKLPKVLSWDEFS
                     RNKGKLAFIAQNFETRSIVTILDNNRQSTIKNYFYKYPRAVRETVEVVTVDMSGSYIP
                     IIKKLFPRAKIVLDRFHIIQHLSRAMMTTRIDIMKTFDTHSLPYRSMKNHWRILQKDS
                     RKLSLNRFFSRTF"
     gene            959..1180
                     /locus_tag="AC1PJC_001715"
     CDS             959..1180
                     /locus_tag="AC1PJC_001715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620696.1"
                     /translation="MDLPTTEIIEPKNFGSFNKQISNIDRIEPNATMAYFENIDWTFP
                     SSGYAYIVKPWNEFWQDFLPQSQQKSAED"
     gene            complement(1204..2538)
                     /locus_tag="AC1PJC_001716"
     CDS             complement(1204..2538)
                     /locus_tag="AC1PJC_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HIP6620697.1"
                     /translation="MLELFKAINNLVWGPPLLLLLVGTGVYFTLRLGVFQIGKLPTAF
                     RLIFSSDQSGQGDVSSFAALCTALAATVGTGNIVGVATAITTGGPGALFWMWVAAFFG
                     MATKYAEGFLAIKYRTKDANGQAAGGPMHYITLGMGQKWKPLAIFFAISGVLVALLGM
                     GTFSQVNSIASSMSASFGLAPQLVSIVTAISIAFFIFGGIEKISDVSTKIVPFMAILY
                     ILASLIVLVVHWNELLPTLGLVLKSAFSPAAAVGGFVGATVKEAIQRGIARGVFSNES
                     GLGSAPIAAAAAKSDNPVEQGLISMTGTFIDTIIICTLTGLTILVTGQWSVEGLEGAP
                     LTQAAFATVFGNTGSIALTISLVLFAFTTILGWSYYGERCIEFLFGTKSILPYRLVFV
                     AMVALGGFLKLDLIWTIADIVNGLMALPNLIALLALSPVIIKETRQYFAKKK"
     regulatory      complement(2645..2750)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:15.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            complement(2963..3595)
                     /locus_tag="AC1PJC_001717"
     CDS             complement(2963..3595)
                     /locus_tag="AC1PJC_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6620698.1"
                     /translation="MFSIQSIQKKFGKRSLFSDVTLDLQAGKVYALIGASGSGKTTLL
                     NILAKLESYDVGDILYKGKDLKKLKPHLFFREELGYLFQNFGLLESQTIRENLDLGLI
                     GQKLSKDERKSRQEAALDAVGLSYLDLSQPIYELSGGEAQRVALAKVILKNPPLILAD
                     EPTAALDPKSSQEIMDILLSLKSPDRLIVIATHNPLIWERADLIIKMEDL"
     gene            complement(3597..5582)
                     /locus_tag="AC1PJC_001718"
     CDS             complement(3597..5582)
                     /locus_tag="AC1PJC_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1430 domain-containing protein"
                     /protein_id="HIP6620699.1"
                     /translation="MKGKFVLVSTIILAVFMIWLGVSQKETMLVHYYPSVTTLSASED
                     VTYSDVQQRLEEYSQQTDSVIARRVIEPSTSGGRTFSYDNFSKSPLPRGLEEFQASEK
                     VESALLTKYFIFQGKATVEELRSLLVSLGFDEVQIRKPSTIATLLAFLTQGGQFLAIL
                     VFLITYMALVVIANVRQLRTAGIRLIAGDSRWHLFLLSLQENAKEIAITIPFAVLPTV
                     GLAYLVGLDGYSVYYLVAALVGYHFLLGLIALFFATTFTLAIRTYHFLPLLKGKMPLQ
                     GILTIMVMGQMLALLVVSFGVAQTVYYSGIWQEYQAGAQQWENEGDYYSLAWNISADG
                     RSGLNSPENWYPLLRQALEEDGALFVKSNLNAYLMGSQLEDGTRLDSYHPAGNTLYVS
                     PNYLWIQDVNLAEGEVALPLQEGEFQLLLPEKLCPESDAYLHLYQDYINRMVRPANQA
                     RSATIKGKVAYLKDGQKQFIYNHRSGQHVQYLTDPILVVLAPSSLGKESADFWLNEVD
                     SSILFKNRDKLLRELKARNLFQFVNEVKSSSSLFTELLDRIRIETISTSMGAILGIVT
                     SIVLFNTMNLLYFEEFKREMFIKEIAGMDFLGIHKKYLTVQLLALLLALGASIVVTGH
                     IFISSISFALFIINALYLLRWQARKEGAWNIRILKGA"
     gene            complement(5602..7587)
                     /locus_tag="AC1PJC_001719"
                     /pseudo
     CDS             complement(5602..7587)
                     /locus_tag="AC1PJC_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774933.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1430 domain-containing protein"
     gene            complement(7963..8256)
                     /locus_tag="AC1PJC_001720"
     CDS             complement(7963..8256)
                     /locus_tag="AC1PJC_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620700.1"
                     /translation="MDLNDYYTDIDPDFSFRELRRKIERYRIVMQARVLLDKRDTIKR
                     TGKTDIQKIASETKQTIQTMRGRLETSIKGSVRTGIEEAVDKHSSLYDTITQS"
     gene            complement(8243..8632)
                     /locus_tag="AC1PJC_001721"
     CDS             complement(8243..8632)
                     /locus_tag="AC1PJC_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620701.1"
                     /translation="MESDVIWERIRKREQELFDLEDDYNQEKNKIEARQEDLEQRQNA
                     LKLLIEREQEEMRCFLSRHSLDYDAALSFFQELDQLQEESFYQYSQEMDQLFQQEERL
                     SQQYRTDLYRLEDTISQLRRDYSNGLE"
     gene            complement(8617..9831)
                     /locus_tag="AC1PJC_001722"
     CDS             complement(8617..9831)
                     /locus_tag="AC1PJC_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipase family protein"
                     /protein_id="HIP6620702.1"
                     /translation="MISDKDYRDISKVVYDVDLLKAPKTPLIQDTPVVNGSFIIIEPP
                     VDAGNGMQAMAVAPIKGYDSDNKPIPDTSQVVIAYAGTNSDDRRDLLTDLQTIAQGRD
                     TLQLEPSPYIEPLEAQNVTALAYADEIQKRYPNATITVTGHSLGGSLAMYVALHKDWR
                     SVTYNGPDIVMLLSLEQLSYMKKHPDQFRNYRNRYDAIGNITGNMTETAVYPRVEKSQ
                     GYMKDHGLGAWKFNKYGQLIDANGQVVSTFTGAPLEDTRLAMKRWKKQKTALSKGGLS
                     RSEEIFLDSEQARTISAGIASVADAGQMSIFAHCDDYVHQAEELWNSIDFHSYSALSY
                     WEVCALFSEHGVSQETIVGEIEETMDIYRQRAEIATEKFTVLDTQIIQAINIMLETDK
                     RLAGDFEKWNQM"
     gene            complement(9828..10229)
                     /locus_tag="AC1PJC_001723"
     CDS             complement(9828..10229)
                     /locus_tag="AC1PJC_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620703.1"
                     /translation="MSKKYTRLILVMGAICIAIGGMMMFSFHRMSEEEKLQAQIRKEQ
                     ERMVLYAVNHYEGIEKIEFVNFEKDNKTGTWDSDAIINDKFHVTFVSWGEDDITINGG
                     KSQTGDYLVPKVATTVTEISDIHVKYYKELP"
     gene            complement(10307..10543)
                     /locus_tag="AC1PJC_001724"
     CDS             complement(10307..10543)
                     /locus_tag="AC1PJC_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620704.1"
                     /translation="MVTDQDYRWLAEDVYGVDALKKVDDPPVQGASVGDDKFVILSQP
                     QDMINGMQAMAVAPIKGYDSDNKPIPDTSQVVIA"
     gene            complement(10537..>10737)
                     /locus_tag="AC1PJC_001725"
     CDS             complement(10537..>10737)
                     /locus_tag="AC1PJC_001725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620705.1"
                     /translation="GVWSAGATINNEYLVTFKAFGFAGDLGMNQSGSKITGGHLIKKA
                     VQTDISNIGHVEVIYLEGDELW"
BASE COUNT         3185 a         2493 c         1943 g         3116 t
ORIGIN      
        1 aaaagtgcga gaaaagaagc gattcagaga cagttttcga ctatcttttt ggagaatacg
       61 ccagtgattt ttcatggatc gataaggtag ggaatgcgta tcgaaagtct tcataatatc
      121 aattctagtc gtcatcatag cacggctcag gtgttggata atgtgaaatc tatcaaggac
      181 aattttagct cttggaaata gttttttgat gatgggaata tagctacccg acatgtccac
      241 tgtcacgacc tcgacagttt ctctgaccgc cctaggatac ttgtagaaat agttcttgat
      301 ggtgctttgg cggttgttgt caagaatggt cacaatcgat ctcgtttcaa aattctgagc
      361 aataaaggcg agttttccct tgttccgact aaattcatcc cagctcaaga cctttggtaa
      421 tttcgtaaaa tcatgctcaa attgaaactg agccagtttc ctctggacga tcgacacgga
      481 gatgtgtagt ctcctagcga tggctatatt ggtcatgttt tctgtatgga gttgtgtcac
      541 tttctcccaa ataggttggg aaatctgaca gtttttcttg actagagctg tctcagctac
      601 agtcactttt tggcaagatt tgcattgaaa ccgccgtttc ttaagcaaga ggagggtcgg
      661 aaagccctga caatccaaaa tcggaatctt tgacgacttt tgaaagtcgt acttgataca
      721 ctttccttgg caatgaggac aaccagggct gtcgtaatct agctttgccc tgatttctag
      781 atgggtctga tgtttcaaaa tgaagagaat tttgatgttt ttgtctttga ttccaattag
      841 ttctgtggta tgataaagtt gttccatatg agtctttcta atgtgagtgt ggttgctttt
      901 cattataggt catatgggac tttttgtata tactcaaaaa ggctccataa tctctacagt
      961 ggatttaccc actacagaaa ttatagagcc gaaaaacttc ggtagcttca acaaacagat
     1021 ttccaacatc gaccgcatcg aacccaatgc caccatggcc tactttgaaa atatcgactg
     1081 gaccttcccg tcttcaggct atgcctacat tgtcaaacct tggaacgaat tttggcagga
     1141 tttcctacca caaagccagc aaaaaagtgc agaggattaa cctttgcact tatttttatt
     1201 tccttatttc ttcttcgcaa aatactggcg tgtctccttg ataatcacag gagaaagagc
     1261 cagcaaggca atcaagtttg gtagggccat cagaccgttt acaatatctg caatggtcca
     1321 gatcaagtcc agtttgagga aaccaccgag agccaccatt gccacaaata ctaaacgata
     1381 aggcaagata gacttggtcc caaatagaaa ctcgatacaa cgttcaccat agtaagacca
     1441 tccgagaata gttgtgaaag caaaaagaac caaactaatg gtcaaggcaa tagaccctgt
     1501 attgccaaaa accgtcgcaa aggcagcttg agtgagcgga gccccttcca atccttcgac
     1561 agaccactga cctgtcacca agattgtcaa acctgttaag gtgcagataa taatcgtatc
     1621 gataaaggta cccgtcatag aaatcaaacc ttgctcaaca ggattatccg atttggctgc
     1681 tgcagctgcg ataggtgccg aacctagacc agattcattt gaaaacactc cacgcgcaat
     1741 accacgttgg atcgcttctt ttacagttgc ccctacaaag ccacctactg ctgctgcagg
     1801 tgagaaggca gatttcagaa ccaaaccaag tgtcggcaac agctcattcc agtgaactac
     1861 caagactatc aaacttgcca aaatgtataa aatcgccatg aaaggaacga ttttggtcga
     1921 aacatccgat attttttcaa ttcccccaaa gataaagaaa gcaattgaaa tggctgtcac
     1981 aatgctgacc aactggggag ccagaccaaa gctagcagac atagaagagg caatcgaatt
     2041 aacctgtgaa aatgtcccca ttcccaagag agccactaaa acacctgaaa tagcaaagaa
     2101 aattgccaaa ggcttccact tttgccccat ccccaaggtg atatagtgca taggtccacc
     2161 tgccgcttga ccattggcat ccttggttcg gtatttaatc gctaaaaatc cttccgcata
     2221 cttggttgcc attccgaaaa aggccgcaac ccacatccag aaaagagccc caggaccacc
     2281 tgtagtaata gctgtcgcaa ctccgacgat atttcctgta ccaactgtcg ctgccaaagc
     2341 tgtacaaagg gccgcaaagc tggacacatc tccctgtcca gactggtcac tggagaaaat
     2401 cagacgaaaa gctgtcggca atttgccaat ctgaaatact cccaaacgaa gggtgaaata
     2461 aacacccgtt ccgaccaata gtaacaagag gggcggtccc caaacaagat tgttgatagc
     2521 cttaaatagt tctaacatag ttcctcctaa gcgtttctaa tccgataaag ctgccggaaa
     2581 aacaaaaaga ggctgaacac ttcaacctct agaatcaacg tgaaaaatac agaaaaagcc
     2641 aatttttcaa cgctctgtcc ttttacctga gagtttcagt agctctactt ttttcaagca
     2701 ggactacctt gccccttcgg tgccaaaatg gtctctccag agttccgtcc attgaacagt
     2761 cagtttccct tctacccaat atcaaccggt tattcagttt tatctagttt tattttaatc
     2821 taatttcacg aaaaaatcaa gaatattttc tgatactcaa tgaaaatcaa aagtagccta
     2881 ggaaacgaag ccgaagatag aactggagtt catcaaggta agttgacaac ggataatttt
     2941 gattttcgaa gagtatgaat ttttacaagt cttccatttt tatgataagg tctgctcgct
     3001 cccaaatcaa aggattatgg gtcgcaatca caattagccg atctgggctc ttcaaggata
     3061 acaaaatatc cataatttct tgggagctct taggatccaa ggcagccgtc ggctcatctg
     3121 ctaaaatcaa tggcggattt ttcaggatga ctttagcaag agctacccgc tgggcttccc
     3181 ctcctgagag ttcatagata ggctgggaca ggtccagata agacagcccc actgcatcaa
     3241 gtgccgcttc ctgcctcgat ttcctttcgt ctttggacaa tttctgacca atcagtccca
     3301 aatccagatt ttctctgatt gtctgacttt ctaaaagacc aaaattctga aagagatagc
     3361 ctaattcctc cctaaaaaag agatggggct tcaacttttt caaatccttt cccttgtaga
     3421 gaatgtcacc tacatcatag gactccaact tggctaaaat attcagcaag gtcgtttttc
     3481 cgctaccact ggcacctatc aaggcataga cctttccagc ctgcaagtct agcgttacat
     3541 cagaaaacaa gctgcgcttc ccaaatttct tttgaattga ttggatagaa aacatactag
     3601 gctcctttca aaatacggat attccaagct ccttctttcc tcgcctgcca cctcaataag
     3661 taaagggcat tgattataaa caaggcaaaa ctgatgctac ttataaaaat gtgacctgtt
     3721 actactatgc tcgctcccaa agctaataaa agggccagta gctgaaccgt taggtatttc
     3781 ttatggattc ccaagaaatc catccctgca atttccttga tgaacatctc acgtttaaat
     3841 tcttcaaagt atagaagatt catggtatta aacaggacaa ttgatgtcac aatccctaaa
     3901 atggcaccca tagatgttga aatggtctct atccgaatac gatctaaaag ttccgtaaag
     3961 agggaggaac tacttttaac ttcattgaca aactgaaaca gatttcttgc cttcaattcg
     4021 cgcaaaagtt tatctctgtt tttaaataaa atactgctat ctacttcatt caaccaaaag
     4081 tcagcagatt cctttcccag acttgacggt gccagcacaa ctaaaatagg gtctgtcagg
     4141 tattgcacat gttgaccaga acgatgattg tagataaact gcttctgccc atcttttaaa
     4201 taggcaactt ttcccttaat ggtagctgag cgtgcttgat tagcaggtct aaccatacga
     4261 ttgatataat cttggtaaag atggagataa gcatcgcttt cagggcacaa tttttcaggc
     4321 aacagaagtt gaaattctcc ttcttgtaaa gggagcgcta cttctccttc tgctaagttt
     4381 acatcctgta tccacaaata atttggacta acgtagaggg tgtttccagc tggatggtag
     4441 ctgtcaaggc gtgtcccatc ttccagttgg gagcccatta aataggcatt caaattactt
     4501 ttgacaaaga gcgcgccgtc ttcctccaaa gcttgcctta gtaaaggata ccaattttca
     4561 ggcgaattta gtcctgagcg accatccgca gaaatattcc aagctaaact atagtaatcc
     4621 ccttcattct cccactgctg ggcacctgct tgatattcct gccaaatccc tgaataatag
     4681 acggtttgag ccaccccaaa tgacaccacc agtagagcca gcatttgccc cataaccata
     4741 atggtcagga ttccttgcag gggcatcttc ccttttaaca agggtaaaaa gtgataggtc
     4801 cgaatggcca aggtaaatgt agtagcgaaa aaaagggcaa tcaaaccaag caagaaatga
     4861 tagcccacta gagctgcgac cagatagtag acagaatagc catctaatcc aacgaggtag
     4921 gccagtccaa ctgttggaag aaccgcaaat gggatagtta tagctatctc tttcgcattt
     4981 tcctgtagag atagtagaaa taaatgccaa cgtgaatctc ctgcaatcaa acggatacct
     5041 gctgtacgca actgccttac attggcaatc acgaccaaag ccatataggt aataagaaag
     5101 accagtatgg ctaagaattg accaccttgt gtcagaaatg cgagtaaagt agcaatagtc
     5161 gaaggcttcc gaatctgaac ctcgtcaaat ccaagcgaaa ccagaagaga ccgaagctcc
     5221 tctaccgtcg ctttcccttg gaaaataaaa tatttggtta aaagcgcaga ctccaccttt
     5281 tctgatgcct gaaattcctc cagccctctc ggcaggggag atttactaaa attatcatag
     5341 gaaaaggtac gtccacctga tgtacttggc tcaatcaccc gcctggcaat cacactatcc
     5401 gtctgttgag aatattcctc taatcgctgt tgtacatctg agtaagtcac gtcctcagat
     5461 gccgacaagg tggtcacaga aggataataa tgaactagca tagtctcctt ttggctaacc
     5521 cccaaccaaa tcataaagac ggctagaatg atcgtcgata caagtacaaa ttttcctttc
     5581 attctacctt cacctcatta actatctgcc atttaataca ctcaactgga ttttttctgc
     5641 ctttttcgct tgtttgttca gtaacatcca actatttatc aacagagcca caactactcc
     5701 taggctaaca ataactgact ttgtcataaa cattgccaac cccatcccaa caagagcgga
     5761 gccgacttgt tctcctagat aagaaccatg caattcgata aaacgcatcc ctgctatccg
     5821 cttgatggct atttctcttt tgaaggtctc aaagtataga agattcatcg tattgaacaa
     5881 tagtatggaa gtgaatattc caaggattgt cggagatagg gtcataagaa tttcaagttg
     5941 aacatttttt ctcagggtgt tgtactgttg cctgctagat aacaagctac ctattgtgtt
     6001 tcgtaaattg tatttgtcca acagctgttc cagcatctct ttatctttga aaaatacaaa
     6061 atctggtaag gcattttccc aaaaatagga cgtttcttca aaactttcag gtgatagaac
     6121 aacaatcaac ggagcctgta aaaattgctc ataatttatc ggagtatgat tgtaaatgaa
     6181 ccatcgcttc tcgtctgaaa tgtaataaac atttgaatgc aaacttatgg atctttctcc
     6241 atccgcaagc aatttcccta ccatgtcctc aaaatacgct tagtaaacac tcgcatcatt
     6301 ttgcaaactc tttggtaata ataaagcaat ttctccctta cctaattgct ttatctcttc
     6361 cagctgattg aaatcgtaca gtccaccttc tgattgtata taattcggcg tcacataaag
     6421 taccctttct agaggaattt ccttgctgga ttcaatgatg gtatgttctt ttattgtgtt
     6481 atgccgtaaa tggtgctgga ctaacattac attatttttc gcatatgatt ctaaaattac
     6541 atgagaccaa gccattcttt gttgctgggc catcgcttca tcagctatga atgcttcacg
     6601 attcaaagac agactaaaaa catcgtgtct ttcttgccaa gccttttctc ctatcgttag
     6661 tgtatggaga actccaacat atgtcaacgt tcgactagca ccaatagaga tgatacaaac
     6721 cgctaaacac tgacctacta gtaaaatagc aaaaatcgcc ttgagaggca aagctccctt
     6781 aattagcttt tgtaactgag aaatgtttaa tgcaatcatg aatccaatac ttgtcgataa
     6841 agataggaaa aaaagcaaac aagcataaaa ggcaataccg attgctacaa aacgataata
     6901 taccattggc caacccaaaa ttaaaatagc aatcaatcca aaaacaagcg ctcctcctgt
     6961 agacaatgct atatctcttc catccactct taaaaaacga ctagcaatct gccaactcct
     7021 cacccctgaa agcatctcta tacctgccga ccgcaagtag acaatctgcc caactactgt
     7081 caatgcaaga ttggtgagta taaagataat aaggcctaag ctcggagctc ccctaccaag
     7141 aaatagactt aaactgttta atagggtcgg tctataaata tagctatcca ccaatcccag
     7201 tgactgtaag acgttttcta ccactttgat gtccagatta ccttttacaa catagtaatt
     7261 ttcagctaag ttggcctgac tagctactaa cctatccgct ttgaccaagc cctgtggaag
     7321 ctcccccttc ccaaaaacat cataactggt agtggttcgc ccactatcat ctgtttctgt
     7381 tattgtctta gcaattagac tattttcctt ttcagctaaa tttgtcaggg catccgacac
     7441 ttcttcatag gtcacttctt cccctcgact taatatggaa accgatggat agtaatgata
     7501 aattaaagaa tcgagttgca gactcactaa ccatatacag aagagacaga tgctaaaagt
     7561 agataaataa gtaaatactt ttttcataac gaaccccctt tgcacaaaaa ggaggtggac
     7621 tccaccacct ccctatcatt agaacccgta accaaaatca acatgctctc caaagtttat
     7681 tgtatcactt cgctattatc tctatcttaa catataaata aaacaaaaac aaggttgctt
     7741 gcattcttac catgccgtac gcatgaagaa aatgcgtata accatttcct agacatctgc
     7801 attttcaaag cgttttcatg aaaccaacac ttcaaccagg atcgtctttc atttccaaag
     7861 ctataaacag ttttctacca aaaacggatg ccaacagcga gaaaatagtt ttgaaaacga
     7921 aattttcttt atacgcttgt tatgcgtaac ttatatctca gcttaacttt gtgtgattgt
     7981 atcatacaag ctgctgtgtt tatccacggc ttcttcaatc cctgtacgta cactcccttt
     8041 gatactggtt tccaaccgtc ctctcatcgt ttgaatcgtt tgcttcgttt cgctggctat
     8101 cttctgaatg tctgtcttcc ctgttctttt tatagtgtcg cgtttatcca acaagactct
     8161 agcctgcatt actatgcgat agcgctctat tttccgccgt agttctcgga aagagaaatc
     8221 aggatctata tcggtatagt aatcattcaa gtccatttga atagtccctc cttaattggc
     8281 taatagtgtc ttctaagcgg tagaggtctg tccgatattg ctgggacagc ctctcctcct
     8341 gttgaaacag ttgatccatc tcttgactgt actgataaaa ggattcttct tgtaattgat
     8401 ccaactcttg aaaaaaggac aaggccgcat cataatccaa ggaatgacga ctgagaaagc
     8461 aacgcatctc ttcctgttct ctttctatca agagttttaa agcattctga cgctgttcta
     8521 ggtcttcttg acgtgcttca atcttatttt tctcttggtt atagtcatcc tccagatcaa
     8581 ataattcttg ctctcgctta cggattcttt cccatattac atctgattcc atttctcaaa
     8641 atctcctgct agtctcttat ctgtttccag cattatgttg attgcttgaa taatttgagt
     8701 gtccaagacg gtgaactttt ctgtagctat ctctgccctc tgccgatata tatccatagt
     8761 ctcttcaatc tctccgacaa tggtttcctg actaacacca tgctctgaga aaagggcaca
     8821 aacttcccaa tagctgagag ctgaatagga atgaaaatca atcgaattcc acaactcctc
     8881 tgcttggtgt acatagtcat cgcaatgggc aaaaatactc atttgccctg catctgcaac
     8941 actagcaatc cctgctgaga tggttctggc ctgctcactg tccaaaaaaa tctcctcact
     9001 acgacttagg ccacctttag ataaggctgt tttctgcttt ttccagcgtt tcatagccaa
     9061 acgagtatct tccagaggag caccagtaaa ggttgatacc acctgaccgt tggcatcaat
     9121 cagctgacca tatttgttaa acttccaagc tcccaaacca tgatctttca tatagccctg
     9181 gcttttttca acccttggat agacggctgt ttcagtcatg tttcccgtaa tattgccgat
     9241 ggcatcgtaa cgattgcggt agttccgaaa ttggtcggga tgttttttca tataagatag
     9301 ttgctctagg gaaagtagca tcacgatatc cggaccatta taggtcacac ttctccaatc
     9361 cttatgaaga gcaacataca tcgccaagga tcctcccagc gaatggcctg tgacggtaat
     9421 ggtagcattt gggtagcgtt tttgaatttc atccgcatat gctagggccg tcacattttg
     9481 ggcttctaat ggctcaatat acggacttgg ttctaattgc agggtatctc taccctgagc
     9541 aatcgtttgc aaatctgtca gcaaatctct tcgatcatct gaattggtcc ctgcataggc
     9601 aataacgact tgagaagtat ctggaatcgg tttgttgtca gagtcgtaac ccttaatcgg
     9661 agcaaccgcc atggcctgca taccgttgcc cgcatcaaca ggtggctcga tgatgataaa
     9721 actaccattt acaactggag tatcttgtat tagtggagtt ttaggtgcct ttaataggtc
     9781 tacatcataa accactttag aaatatctct ataatcttta tccgatatca tggcaactcc
     9841 ttatagtatt ttacgtgtat atcactaatt tctgttactg tggttgctac tttaggaact
     9901 aagtaatcac ctgtttgaga ttttccacca tttattgtaa tatcatcttc tccccaagat
     9961 acaaaagtaa catggaattt gtcatttata attgcatcac tatcccacgt ccctgtctta
    10021 ttatcctttt caaaatttac aaactctatc ttctcaatcc cttcatagtg attgacggcg
    10081 tacaaaacca tccgctcttg ttcctttcgg atttgagcct gcaacttttc ttcctcactc
    10141 atgcgatgaa aactaaacat catcattcct cctattgcga tacaaatggc gcccataaca
    10201 agtatgaggc gggtatattt cttggacatc tgaaacctcc ttatgttgat tatactataa
    10261 atactcggta tttacactag aatcaagata agaaaactat cttatactag gcaataacga
    10321 cttgggaagt gtctggaatc ggtttgttgt cagagtcgta acccttaatc ggagcaaccg
    10381 ccatggcctg cataccgttg atcatatctt ggggctggga gaggatgacg aatttatcgt
    10441 cacctacact tgcaccttga acaggagggt catcgacttt ctttagggca tcgacaccgt
    10501 acacatcctc tgctaaccat cgataatctt gatctgttac cataattcat ccccctcaag
    10561 gtaaatcact tcaacatgac caatatttga aatatctgtc tgtaccgcct ttttaatcaa
    10621 gtgaccacct gtaattttag atccactttg gttcattccc aagtccccag caaatccaaa
    10681 agctttaaaa gttactaggt attcattatt tattgtagca cctgcagacc aaacacc
//
LOCUS       DBNFCX010000077        10619 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.077, whole genome shotgun sequence.
ACCESSION   DBNFCX010000077 DBNFCX010000000
VERSION     DBNFCX010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 10619)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10619)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10619
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.077"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..1353)
                     /locus_tag="AC1PJC_001726"
     CDS             complement(<1..1353)
                     /locus_tag="AC1PJC_001726"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase family protein"
                     /protein_id="HIP6620706.1"
                     /translation="MSKNKHMLLGIGLAVGLTAVGYITLLEPMISDFKINQSAVNIDI
                     QTSKTKSTLPIPPLLEDKNPDPNIADFTLEPQEGETSFLPNTKTRTMGYNGSFLGPVI
                     RVSKGEQVNVHVNNKLKEATTVHWHGLEVEGEKDGGPHQGIEPGATWEPSFTVNQQAA
                     TLWYHPHFGGNTATQVYKGLAGLFYVDDEVSKSLNIPKEYGVNDIPLVIQDRSFGKDG
                     SFIYNTNMMDGATGDTIIVNGAIKPNLEVNRVKMRFRIVNGANASNFNLKLDNRDGFY
                     QIASDGGFLEKPVSQRNIMLSPGERAEIIVDFSKYEKGTQLSLMSNKEAIMTFNVKGD
                     GKDDTEVPSTLTNIERMSEAQATKIRSFELQGMGQMVSINGKKFDMNRIDETVKLGDT
                     EIWEITNPGSMMHEMGHPFHIHGTQVQILSRNGNAPSPEESGWKDTVYIEPNEKVRLI
                     V"
     gene            complement(1392..1586)
                     /locus_tag="AC1PJC_001727"
                     /pseudo
     CDS             complement(1392..1586)
                     /locus_tag="AC1PJC_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002362947.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
     gene            complement(1609..2055)
                     /locus_tag="AC1PJC_001728"
     CDS             complement(1609..2055)
                     /locus_tag="AC1PJC_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000103845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006825 - copper ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CopY/TcrY family copper transport repressor"
                     /protein_id="HIP6620707.1"
                     /translation="MSTIELNTSITDAEWEVMRVVWANDRVTSKTVISVLKEKMDWTE
                     STIKTILGRLVEKGVLNTEQEGRKFIYTANIVEKEAVRDYAEDIFNRICKKKVGNVIG
                     SIIEDHVLSFDDIDRLEKILEIKKSFAVEEVDCQCTEGQCDCHEGC"
     gene            complement(2520..2858)
                     /gene="cadX"
                     /locus_tag="AC1PJC_001729"
     CDS             complement(2520..2858)
                     /gene="cadX"
                     /locus_tag="AC1PJC_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000711077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cd(II)/Zn(II)-sensing metalloregulatory
                     transcriptional regulator CadX"
                     /protein_id="HIP6620708.1"
                     /translation="MKKDSICQVNVINQQNVTTATNYLEKEKVQKSLRILSKFTDNKQ
                     INIIFYLLAVEELCVCDIACLLNLSMASASHHLRKLANQNILDTRREGKIIYYFIKDE
                     EIRDFFNQLG"
     gene            complement(2870..3484)
                     /locus_tag="AC1PJC_001730"
     CDS             complement(2870..3484)
                     /locus_tag="AC1PJC_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000615743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CadD family cadmium resistance transporter"
                     /protein_id="HIP6620709.1"
                     /translation="MIQNVVTSIILYSGTAVDLLIILMLFFAKRKSRKDIINIYLGQF
                     LGSVSLILLSLLFAFVLDYIPSKEILGLLGLIPIFLGLKVLLLGDSDGEAIAKEGLSK
                     DNKNLIFLVAMITFASCGADNIGVFVPYFTTLNLANLIVALLTFLVMIYLLVFSAQKL
                     SQVPSVGETLEKYSRWFIAVVYLGLGIYILIENNSFDMLWTVLG"
     gene            complement(3526..3690)
                     /locus_tag="AC1PJC_001731"
     CDS             complement(3526..3690)
                     /locus_tag="AC1PJC_001731"
                     /inference="COORDINATES: protein motif:HMM:NF025711.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpXC domain-containing protein"
                     /protein_id="HIP6620710.1"
                     /translation="MKTPEIVSAILYWDFFKFTCHNCNHMVLIDYPTVVVDEEQKTII
                     QYDLFDIYKV"
     gene            complement(4442..5794)
                     /locus_tag="AC1PJC_001732"
     CDS             complement(4442..5794)
                     /locus_tag="AC1PJC_001732"
                     /inference="COORDINATES: protein motif:HMM:NF014825.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SEC-C metal-binding domain-containing protein"
                     /protein_id="HIP6620711.1"
                     /translation="MVFNTFIKCQVCGSITRIRLQVGWQEEHPIEVACGKFGTSLSGS
                     VKIGQEHPGLSFSFDNADDVQDAEADYIVECSGEFPTVKQGKAAELEGLVITPFIRYM
                     NCMKTDDSYEEFGQDVSRLNATAQKWKSYKRILTLAKNNSEYLTQEIQKEFSGQFFQC
                     RDESETLRAVHMIEVHGLYSSLRKDILNDLSFSAGIMKMDSAQMKSLIDFLNSHDGFH
                     LEELQELIYKVYDEFMAVYQRLIPAFALQYCKDNSFDFEHEGSTTSSFDSVKQFYLDV
                     YEALGNLMIIPVALNNIKYRSDINAMNPIEKNVNSLEDYIKLTKASRYHFCLDSEVYT
                     GFLKILVNAKLRNAIGHNDVEYNSVDQLITYIPNPKDRTKKKTEYLLQFENEAMHMFQ
                     GILGISEYLYRLRELALMYDGKIPLMVQERANWPKKIGRNEPCPCGSGKKYKFCHGKS
                     "
     gene            complement(5818..7638)
                     /locus_tag="AC1PJC_001733"
     CDS             complement(5818..7638)
                     /locus_tag="AC1PJC_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009559487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF262 domain-containing protein"
                     /protein_id="HIP6620712.1"
                     /translation="MKKIEGSPKNLKQLLQNTKYSIHYYQREYMWQRKHIEELIDDLT
                     SEFLEYYKTDDPRQAVADYGAYFMGSIVLAGRENAIIDGQQRFSSLTLLLMYLNNRLK
                     NISQSYNMIETMIFSESFGTKSFNINVDDRQDCMNAIFNDTDFDTTGAGESVKNLYGR
                     YQDIQDVFPADITDDMLLHFCDWVAEKVFFIEIVATTEQDAHKVFVTMNDRGLSLTST
                     EMLKGYILSEIKSDSSREKMNGIWKDKVLTLKKDDDKGDETFIKAWLRAHYAETIRET
                     KAGAVNKDFDIIGGSFHKWVRDERDKLGLNGSDDFELFIKKFAKFAEVYERIRQAETT
                     FAEETKYVYYNAQVNFTLQPQLLLAPVCYEDSWPVIIEKINLVARFIDVLIVSRVTNY
                     RSVDYSTIKNFVFNVTKDIRMTDIPTLKQKLEQQYINLAFDPAAALSDLRLNSFTKKY
                     IKNILARITGFIEEQTGVASNYCNYMNTQTKNPFEIEHIITDHYEWFTAEYSDQDDFR
                     RWRNSIGALLLLHKSINASLNDAKYDYKLKKYCSNEGNIYTESLGDLAYQNNPKFKKF
                     IADNNLGFKSYASFGKNEITERIAVLVDLVKLVWNDDMFM"
     gene            complement(7638..10283)
                     /locus_tag="AC1PJC_001734"
     CDS             complement(7638..10283)
                     /locus_tag="AC1PJC_001734"
                     /inference="COORDINATES: protein motif:HMM:NF012492.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HIP6620713.1"
                     /translation="MESNTTFGEIFFEKIDENEYLKKLYEDILYNYALKVFGYTRRLK
                     RNLAINDALRFADILSKSNHSTKADKHKVWAQEIVTMLNYIYPENPDVLYVAGSVLTS
                     VGNYQGRNIIKSDFNGADAMEKIYLELKKDYYTIPSAPDKQFMVAQKSAYDHFANSYY
                     SYSAPTSMGKSFIMRMFIKEKILSDCRHNFAIVVPTKALINEIRIKITKEDLGEILHQ
                     KNYHVVTAAGDAALSNWKDKGQNYIFVMTPERMLYLMINEPDIQIDYLFVDEAHKITG
                     ADKRSPFYYQVVNMLSERPHRPHIIFASPNVPNPEVFLDTIPDVQSANEHKLQTSYTP
                     VSQPKFIINLINREVSIYNEHNDSNIPITSIALDDADLIDVLLRFEKDEKQKEKPFIV
                     YFPSTRKTVVAARDFGANRIPKTNCQELMELAKDIKNEVHGDYYLADLVSKGVAYHIG
                     YLPASIRQRIEDLFKAGKITALFCTSTLVEGVNLPADNLFITDYRNGQKDMRPIDFRN
                     LVGRVGRLEFNLYGNVFLVATSEKASDKFETLLSKSVDKQTLSIEKGLTKPQKQNVIN
                     ILLKGDVEFPKHPQKQTEDSYDLMRKFAIILLNDIMAGRESRVRREFQKVMKPGDEDK
                     IKANFSNRQQHMKDNDITVSVDQNESLYEAIAVNGLEFPSIDSNGRYDKDELWAFLLR
                     IAKIFKWKSYESYTLGAPGNDPNKYSSLSYYRVILGQWVSGHGLQQIISEAIRFKKNN
                     PREAMFIDGKKVDYKEGSEHNNIIISEVLSVIDKIILFKLSNYFLKISNAYKDIKGKP
                     APNDWYEFVEYGSTNKRSIEIQKYGFSRESALYILQHEAEYVYKSETELKLKKSLLEC
                     PNKGVKADAELAWYNTPELFLEEEA"
     gene            complement(10273..>10619)
                     /locus_tag="AC1PJC_001735"
     CDS             complement(10273..>10619)
                     /locus_tag="AC1PJC_001735"
                     /inference="COORDINATES: protein motif:HMM:NF020452.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Hachiman antiphage defense system protein HamA"
                     /protein_id="HIP6620714.1"
                     /translation="DLVFAQSADTVLADALSKIITPAPDAPDVDSAYGIFLCCSLGLD
                     KTKYSVAEYKKLVEQKMVSNIHNYLPRIKKHIDDLGLSGRSFYIYVVPLDDATEDKTT
                     IMKKVTGGAYGI"
BASE COUNT         3157 a         2163 c         1641 g         3658 t
ORIGIN      
        1 aactataagt cttacttttt cgttaggctc aatatataca gtatctttcc atccgctctc
       61 ctctggagaa ggcgcattac cgtttcttga tagaatttga acctgtgtgc catgaatatg
      121 gaatgggtgc cccatttcat gcatcataga tcctgggttt gtaatttccc aaatctctgt
      181 atctccaagc ttcactgttt catcaattct attcatatca aactttttac cgtttattga
      241 taccatttga cccatacctt gaagctcaaa gcttcttatc ttagtagctt gtgcttctga
      301 cattctttct atattcgtta aagtactagg tacttcagta tcatctttcc catcgccttt
      361 aacattaaag gtcataatgg cttccttatt actcataagt gatagctgcg ttcccttttc
      421 atactttgaa aagtccacta ttatctctgc tctttcccca ggtgataaca taatatttct
      481 ctggctaacc ggtttttcta aaaatccacc atcagatgct atttgataga atccatctct
      541 attatctaac ttcaaattaa agttacttgc attagcacca ttaactattc taaatctcat
      601 cttgactcta ttaacctcta aattaggttt aatagctccg ttaactatga tagtatcccc
      661 tgttgctcca tccatcatat ttgtattata aataaaactg ccgtccttgc caaagcttct
      721 atcttgaatt actaaaggta tatcatttac tccatattcc ttaggaatat ttaagctttt
      781 tgatacttca tcatccacat agaatagtcc tgctaaacct ttataaactt gggtagcagt
      841 atttcctcca aagtgcggat gataccacaa tgttgctgcc tgttgattta ctgtaaaact
      901 aggctcccaa gttgctcctg gttcaattcc ttgatgaggg cccccatcct tttctccttc
      961 tacctctagt ccatgccagt gaactgtagt tgcttctttt agcttgttat ttacgtgcac
     1021 atttacttgc tcacctttac ttactctgat gacagggcct aagaagcttc cgttgtaacc
     1081 catagttcgt gtcttggtat ttggtaaaaa tgaagtttct ccttcttgag gttctaaagt
     1141 aaaatccgca atattaggat ctggattttt atcctctaat agtggtggta taggaagtgt
     1201 actttttgtt ttacttgttt gaatatctat attaactgca ctctggttta ttttaaaatc
     1261 actaatcatt ggttctaaaa gtgtaatata tccaactgca gttaatccga ctgcaagtcc
     1321 aatacctaat aacatatgtt tattcttact catttttatt cctccataaa ttattattct
     1381 aattaataat aatctgcttg agctaatgcg ggtgcatcgt taatgccgtc tccaaccatc
     1441 gctaccttct tgcctgcctc ttgtagtttt ttgacttcct ctgctttatc ttcaggtaat
     1501 acttcactta atacactgtc tatacccact tgcttagcaa tcgctttggc tgttcgttta
     1561 ttatctccag taatcatgat tacttcaaca ccgcgtcttc taagttcttt aacagccttc
     1621 atggcaatcg cattgccctt ctgtacactg acaatccact tcttctactg cgaaagattt
     1681 ttttatctct aatattttct ctagtcgatc tatatcatcg aagcttaaga catgatcttc
     1741 aatgatgctt cctattacat ttccgacttt ctttttgcaa atacggttaa aaatatcttc
     1801 tgcataatcc cttacggctt ctttctctac aatattggca gtgtaaataa actttctacc
     1861 ttcttgctct gtatttagta cgcctttttc aactaatcga cctaagatcg ttttgatagt
     1921 ggattctgtc cagtccattt tttctttcaa tacagagatg actgttttac tagttactcg
     1981 atcatttgcc caaactacac gcattacttc ccattcagca tctgtgatag aagtattaag
     2041 ttctattgtg ctcattttcc tttcctcctt gtcatttaca aatgtaaacg aatatgttca
     2101 aaataagtct actattgtaa acgaaatttg tcaagtcttt ttattaaatt ctcacttttt
     2161 ggggtcagtc ccttaaaact gaaagtttta aaatgaaatt agccatctac ctatactgtg
     2221 agatgaaggc tacgactcat tctgataagt catcgatttc atttgatgac aggtttggag
     2281 ctgttaggca aatttgccaa ggctaatcat agccttgctt tagcccaaaa aagacatcca
     2341 agagatttct cttgaatgtc tgtaaacgct gatataatcg taggtcgctt tgctttaaat
     2401 tatacttttt tcttaaacat ttgatacgag taggtatttc ttgtgagtaa ttttcatcaa
     2461 aaatttcata tataatcttc ctataatcat ggaaaagtag aaagtagtaa aaatagttgt
     2521 tatcctagtt gattaaaaaa atctctgatt tcctcatctt ttataaaata atatataatt
     2581 ttcccctctc ttctagtatc caagatgttt tgattggcta gtttacgaag atggtgggag
     2641 gcagatgcca tactgagatt tagtaaacag gctatatcgc agacacatag ttcttcaaca
     2701 gcaaggagat aaaagatgat atttatctgt ttattatcgg taaactttga taagatgcga
     2761 agtgattttt ggactttttc cttttcaagg tagttcgttg cggttgtaac attttgttga
     2821 tttataacat tcacttggca gatactatct tttttcataa ttttttctcc tagcctaaca
     2881 cagtccatag catgtcaaaa ctgttgtttt caatcaggat atatatcccc aatcctaaat
     2941 aaacaacggc aataaaccat ctgctatatt tttccaaagt ttctccaaca gaagggactt
     3001 gtgacaattt ttgggcagaa aaaaccaaga gataaatcat gactagaaag gtcagtaaag
     3061 ccactatcaa attcgctaaa tttaaggtag taaaatatgg gacaaagaca ccaatattgt
     3121 cagcaccaca acttgcaaaa gtaatcatag cgactagaaa aatcaggttt ttattatctt
     3181 tgctcaaacc ttctttggca atagcttctc catcagaatc tcctaaaagc aaaactttga
     3241 ggcctaggaa aattggaatc aaaccgagca aacctaaaat ctctttacta ggaatataat
     3301 ctaagacaaa tgcaaaaagc aaacttagca atattagact aacagagcct agaaattgtc
     3361 ctaaatagat gttaatgatg tcttttctgc tttttctttt ggcaaagaat aacattagga
     3421 taataagtaa gtctacggct gtcccagaat acaggattat tgaagtaaca acattttgaa
     3481 tcataaaata cctcattcaa atatattttt gaatgtattt taacattaaa ctttgtagat
     3541 gtcaaagagg tcatactgaa taattgtttt ttgttcttca tctactacga ctgttgggta
     3601 atcaattagc accatatggt tacagttatg gcaggtaaat ttaaagaaat cccagtacaa
     3661 aatagcagaa acaatctcag gggtcttcac cgaataaacc ctatcaaatc tttaaaaagt
     3721 actttgtttt ccgcaattag tgcagtttgt ttttgttaaa aaaattgttg tcattctact
     3781 tttcctcttc atcattatta agtaagcaac ttgctctcac ttattatact cgcaatgcaa
     3841 aataaatttt ggaatttttt tcaaaaaaag ttaaattgta tcaatttcag aactcacact
     3901 tcaatcgtcc attcaggcga tattagaggt ggggacgttt ctattcccac aaactccttg
     3961 tcaatggaaa caaacacgta cccacagggt aaatggaaat agaattggat aatttctagc
     4021 tatcacttct acccactcaa aaattttctc actctgatac ttccccacta cataacaaaa
     4081 gccttgcaat caaggctttt cattatccct ttcgttcaaa ggtttctagg cttttacgag
     4141 cagagcaaca cactcgacgt ggctcgatac gtgctgattg atgtcgcaat atcggaacat
     4201 atcgccctat tttgagccga ttttcgattg ttctcggaaa catatctatc ggcacatttt
     4261 gcccttattc aatccgcaac ctaaaccctt ctcgttgtcg gaaacatagc gagattttct
     4321 agttgctact atatataagc agcacataag cttccatcgc ctcaagcccg gactagcctt
     4381 ttagggaatt agtcatagta gaactgtttc cacatagaag gcatcgtctc aaccttatta
     4441 tttaggactt cccgtggcaa aatttgtatt tctttccact tccgcaagga cacggttcat
     4501 tgcgtccaat tttcttaggc cagtttgccc gctcttgaac catgagaggt attttaccat
     4561 catacatgag tgcaagttct ctcaaacggt atagatattc cgaaattcct aatatacctt
     4621 ggaacatatg catagcttca ttctcaaact gaagaaggta ttcagttttc ttttttgttc
     4681 tgtctttcgg attaggaata taagtaatca gctggtctac tgaattatat tcaacatcat
     4741 tatgaccgat ggcatttctc aatttcgcat tcactaggat tttcaaaaag cctgtgtaaa
     4801 cttcagagtc caaacagaaa tgatatcttg atgcttttgt aagtttaata tagtcctcca
     4861 aagaatttac attcttctct atcggattca tagcattgat gtcagacctg tatttaatat
     4921 tattgagagc tacaggtata atcattaaat tacctaatgc ttcataaaca tccagataaa
     4981 actgctttac actatcaaag ctgcttgttg tagagccttc gtgttcaaaa tcaaaagaat
     5041 tatctttaca gtattgtaat gcaaacgcag gtataagtct ttgatatacg gccataaact
     5101 catcatagac cttgtaaatt aattcctgca attcttcgag gtggaagcca tcatgagaat
     5161 taaggaaatc aatcaaactc ttcatttgcg ctgaatccat tttcattatt ccggcactaa
     5221 acgaaaggtc attaaggata tcttttctta atgatgagta aagaccatgc acctcaatca
     5281 tatgaacagc tcttagcgtt tcagattcat ctctacattg aaagaactga ccagaaaact
     5341 ccttttgaat ttcttgagtt agatattcgc tattgttttt ggctaatgtt agaattctct
     5401 tataactctt ccatttttgg gctgttgcat tcagtctaga cacatcttgt ccaaattcct
     5461 cataagagtc atccgttttc atgcaattca tatatcgaat aaacggtgta atcactagcc
     5521 cttctaattc tgctgctttt ccttgtttta cagtaggaaa ctctccggag cactcaacaa
     5581 tataatcagc ttctgcatct tgaacatcat ctgcattatc gaatgaaaaa cttaaccccg
     5641 gatgctcctg tcctatctta acgctaccag acaaggaggt tccaaattta ccacacgcaa
     5701 cttctatcgg atgttcttct tgccagccaa cttgcaagcg gattctagtg atgctgccgc
     5761 aaacttggca tttaataaag gtattaaaaa ccatgaaacc tacctccttt agctggatta
     5821 cataaacata tcatcattcc aaacgagttt taccaaatca acgagtactg ctattctctc
     5881 agtaatctca tttttgccaa atgaagcata cgatttgaat ccaagattgt tatctgcaat
     5941 gaacttctta aatttaggat tattctgata tgccaaatca ccaagcgatt cagtatagat
     6001 attgccttcg ttagaacaat atttcttcag tttataatca tactttgcat catttaagct
     6061 ggcattaatg ctcttatgaa gaagcagtaa cgcaccgata ctatttctcc agcgtctaaa
     6121 atcatcttgg tcagaatact ctgcagtaaa ccattcatag tggtctgtaa taatatgttc
     6181 aatctcgaaa ggattctttg tttgagtatt catataatta cagtagtttg atgcaacacc
     6241 agtctgctcc tcgatgaaac cagtaatacg tgcaagaatg ttcttgatgt atttctttgt
     6301 aaaactgtta agtctcaaat cacttaatgc tgctgcaggg tcaaaagcaa gattgatata
     6361 ctgttgttct aatttctgtt tcaatgtagg aatatctgtc atacggatat ctttggttac
     6421 attgaaaacg aagtttttga ttgtactgta atcaacagaa cgataattag tcactctgga
     6481 tacaattagc acatctataa atctagctac caaattaatt ttctcgatga ttactggcca
     6541 tgaatcctca tagcatacag gagccagtaa aagctgtggc tgtaatgtga agttaacctg
     6601 cgcattgtaa tatacatatt ttgtttcttc agcaaaggtt gtttcagcct gacgaatgcg
     6661 ctcataaacc tctgcgaatt ttgcaaattt ctttatgaac agctcaaaat catcggaacc
     6721 attaagccct aacttatcgc gttcatctcg cacccattta tggaaggaac caccgatgat
     6781 gtcgaaatcc ttatttactg caccggcttt tgtctcacgg attgtttctg catagtgagc
     6841 tctaagccaa gctttaataa atgtctcgtc acccttgtca tcatcttttt tcaatgtaag
     6901 aactttatcc ttccaaatac cattcatctt ttcacgtgat gaatcagatt tgatttctga
     6961 aagaatataa ccctttaaca tttctgtaga tgtaaggctc aaaccacggt cgttcattgt
     7021 aacaaatact ttatgagcat cctgctcagt tgttgctaca atttctataa agaatacttt
     7081 ttccgcaacc caatcgcaga aatgcagcaa catatcatct gtaatatcag ctgggaaaac
     7141 atcctgaata tcttgataac ggccataaag attttttact gattctccgg cacctgtagt
     7201 atcaaaatca gtatcgttga aaattgcatt catacaatcc tgacggtcat caacgttgat
     7261 gttgaaagac tttgtaccaa aggattctga gaaaatcatt gtctcaatca tgttataact
     7321 ctgactgata ttctttaatc tgttattaag atacatcagc aacaatgtca aagaagagaa
     7381 tctttgctgg ccatcaatga ttgcattttc tcttccggcc agaacaatag aacccatgaa
     7441 atatgcaccg taatcagcta cagcttgtct tgggtcatct gttttataat attccaagaa
     7501 ttctgatgta aggtcatcaa tcaattcctc tatgtgttta cgctgccaca tatattcacg
     7561 ctggtaatag tgaatagagt atttcgtatt ctgtaataat tgttttaggt tcttaggcga
     7621 accctcaatc ttcttcatta ggcttcctcc tccagaaaca gttctggtgt attataccaa
     7681 gccaactcag catcagcttt aacacccttg ttaggacatt ctaatagcga tttcttaagt
     7741 ttgagctctg tttctgattt ataaacatac tctgcttcat gctgtaaaat gtacaaagca
     7801 gattctcttg aaaagccata tttttgtatt tcgattgaac gtttatttgt tgagccatat
     7861 tcaacaaact cgtaccaatc attcggtgct ggctttcctt taatatcctt ataagcattt
     7921 gatattttca aaaagtagtt tgaaagctta aacaggataa ttttatcaat tactgatagc
     7981 acttcggaaa taatgatatt gttatgctcc gaaccttctt tataatccac ttttttgcca
     8041 tcgataaaca tagcctcacg tggattattc ttcttaaatc ttatagcctc agaaataatc
     8101 tgttggagtc catgtccaga aacccactgt ccaagaatta ctctgtaata agataatgag
     8161 ctatatttgt tcgggtcatt tcccggagca ccaagcgtat aagattcgta agatttccat
     8221 ttgaaaatct tagcaattct caataagaag gcccacagtt catctttatc atatcgacca
     8281 ttgctgtcaa tagaagggaa ttctaagcca ttaaccgcaa tcgcctcata taatgattca
     8341 ttttggtcaa ctgatacagt tatgtcatta tctttcatgt gttgctgacg atttgagaag
     8401 tttgccttaa tcttatcttc atcgcccggt ttcatcactt tttgaaattc tcgacgcaca
     8461 cgactctctc taccagccat gatatcattc aagagaataa tcgcaaattt cctcatcagg
     8521 tcatatgaat cttcagtctg tttctgcgga tgtttaggaa actcaacatc gcccttcaac
     8581 agaatattaa ttacattctg cttttgaggt tttgttaatc ccttttcaat agatagtgtt
     8641 tgtttatcaa ctgatttaga aagcaatgtt tcaaacttat ctgatgcttt ctcagatgtt
     8701 gccactaaaa atacatttcc ataaagattg aactctagac gtcctactct accaacaaga
     8761 tttcggaagt ctataggtcg catgtccttc tgtccgtttc tataatcagt gataaaaaga
     8821 ttatctgcag gaagattcac accttcaaca agagtacttg tacagaataa agctgttatc
     8881 tttccggctt taaacaaatc ctctatacgt tgacgaattg aagctggaag gtaaccaata
     8941 tggtatgcaa cccccttaga aaccaagtct gcaaggtagt aatcaccgtg gacttcattc
     9001 tttatatctt tagcgagctc catcaattct tgacaatttg ttttaggaat acgattagca
     9061 ccaaaatcac gtgcagcaac taccgtcttt ctcgtagaag gaaaatatac aataaatggt
     9121 ttctccttct gcttctcatc tttttcaaac ctaagcaaaa cgtctattaa atcagcatca
     9181 tcaagtgcaa tcgaggtaat agggatatta ctatcattgt gctcattgta gatgcttact
     9241 tctctgttaa tcagattaat aataaacttc ggctgtgaaa ccggagtata tgatgtctgc
     9301 aatttatgtt catttgcaga ctgcacatcc ggtatagtat ccaaaaacac ttcaggattt
     9361 ggcacattgg gagaagcaaa gattatatgc ggtctgtgcg gtctttccga cagcatattt
     9421 acaacctgat aatagaaagg gcttctttta tccgcacctg taattttatg agcctcatct
     9481 acaaataaat aatcaatttg aatatccggc tcatttatca tcaggtacag cattcgttcc
     9541 ggcgtcataa caaagatata attttgccct ttgtctttcc aattagatag agctgcatca
     9601 cctgctgcag taacaacgtg gtaattcttt tgatgcagaa tttcgcctaa atcctcttta
     9661 gtgattttta ttctgatttc atttatcagc gctttggtag gtacaacaat tgcaaaattg
     9721 tgtctacaat cactgaggat tttctcttta atgaacattc tcattatgaa agatttcccc
     9781 atagatgtag gcgctgaata gctataatat gaattcgcaa aatggtcata agcagacttt
     9841 tgcgctacca taaattgttt atccggtgcc gatggaattg tataataatc cttctttaat
     9901 tcgagataaa tcttttccat agcatcggcc ccattaaagt ccgacttaat gatattgcgt
     9961 ccctgatagt taccaacgct ggtcaaaaca gagccagcta catataaaac atcaggattt
    10021 tctgggtata tgtaattaag catggtgaca atttcttgag cccatacttt atgcttatct
    10081 gcttttgtgc tgtgattaga ttttgaaaga atatctgcaa atcgtaacgc atcatttata
    10141 gcaagatttc tttttaatct tctcgtataa ccgaatactt ttaaggcgta gttgtaaaga
    10201 atatcttcat acaacttctt taggtattcg ttctcatcta ttttctcaaa gaagatttct
    10261 ccgaaggtag tattagattc cataggcacc tccagttact ttcttcatta ttgtcgtttt
    10321 atcttctgtg gcatcatcta aaggcactac ataaatatag aacgagcgtc ccgacaagcc
    10381 taaatcatca atatgttttt tgattcttgg caaataatta tgaatattac tcaccatctt
    10441 ctgttcaact aattttttat attcagctac tgaatatttt gttttatcca accctaaaga
    10501 gcagcaaagg aatataccat aggcagaatc tacatccgga gcatctggtg ccggtgtaat
    10561 aatcttgctc aacgcgtctg caagaactgt atctgcactt tgagcaaaaa caaggtcgt
//
LOCUS       DBNFCX010000078        10590 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.078, whole genome shotgun sequence.
ACCESSION   DBNFCX010000078 DBNFCX010000000
VERSION     DBNFCX010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 10590)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10590)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10590
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.078"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            58..762
                     /locus_tag="AC1PJC_001736"
     CDS             58..762
                     /locus_tag="AC1PJC_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HIP6620715.1"
                     /translation="MKIHVVNNQVEGATVALDILKEKLNGGAKVLGLATGSSPLEFYR
                     LIRESDLDFSDVTSVNLDEYVGLGEESDQSYIHFMKENLFNDKPFKQSYLPNGLATDV
                     VAETERYNKILAEHPVDFQILGIGRNGHIGFNEPGAPFDGQTHLVELAPSTIEANARF
                     FDNPEDVPKQAISMGIANIMAAKTIVLMAYGQEKADAIKATVEGAVTEDIPASVLQNH
                     DDVVLILDQAAASKLA"
     gene            complement(801..1907)
                     /locus_tag="AC1PJC_001737"
     CDS             complement(801..1907)
                     /locus_tag="AC1PJC_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018376708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low temperature requirement protein A"
                     /protein_id="HIP6620716.1"
                     /translation="MSEIIAKRVSNYELFYDLVFVLATSSLTGLLHGDHIGLREILTF
                     ITANLIIMTLWINETIYLNKYGERDLLDIFTIIASMFVVGQLSLNFSHDFKATALPFT
                     IFLTLSYLLLCLQYYLRGRKIGFTADIKNSLYMFGIYLLVFFLALVAIYFNFWTYDEK
                     SLLLFYLPFFISYFFKDKLSHDVMNFPHIVERCQLITIITFGEMVIAILKNYPIQTHL
                     LTSVLFFLAMAFSFMFYISQTYLNINHHQKTNVATLLYAHMVLVLGLNFFTVSVEVLP
                     GEHASLGLPFLLIGYFLYFIGILMTSRYNQDLYQLDKMVWLQYAIVVFTTIILLIAFH
                     HHLTLIAAILVASSFMMLVISFRHRNRVEVDLEK"
     gene            complement(1980..2936)
                     /locus_tag="AC1PJC_001738"
     CDS             complement(1980..2936)
                     /locus_tag="AC1PJC_001738"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000523788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004364 - glutathione transferase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HIP6620717.1"
                     /translation="MGLLQDGKWVDQWYDTKSTGGKFVRTVTQFRNWITPDGQAGPTG
                     EGGFKAESGRYHLYISLACPWASRTLIMRKLRGLEDHISLSVVHPLMLENGWTFADGP
                     GVIKDPLFNSDYLYQVYLKADPHYSGRVTVPVLWDKETNTIVSNESAEIMRMFNSAFN
                     DITGNYDDYYPANLQAEIDAMNDFVYPNINNGVYKAGFSTSQAVYEKEVKNLFAALDK
                     LEEHLADKNYLVGNQLTEADIRLFTTLVRFDPVYFGHFKCNIKALVDYPNLWDYTKRI
                     YNHSGIAETVDFDHIKQHYYGSHKTINPTGIVPVGPDLDWTL"
     gene            3075..3791
                     /locus_tag="AC1PJC_001739"
     CDS             3075..3791
                     /locus_tag="AC1PJC_001739"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002282339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_function: GO:0140098 - catalytic activity, acting on
                     RNA [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HIP6620718.1"
                     /translation="MRLDKCLEKAKVGSRKQVKKLFKAQQIKINGQAAQSLSQIVDPE
                     LQTIQVSGKKVALEGSAYYLLHKPAGIVSAVTDQEHQTVIDLISPQDSREGLYPVGRL
                     DRDTEGLVLITNNGPLGYRMLHPSHHVDKVYYVEVNGCLAEDASKFFASGVTFLDGTR
                     CQPADLTVLEASLDHSRATIKLAEGKFHQVKKMFLAYGVKVTYLKRISFGGFELGDLE
                     RGAYRQLTPNEMEHLFTYFD"
     gene            3805..4284
                     /locus_tag="AC1PJC_001740"
     CDS             3805..4284
                     /locus_tag="AC1PJC_001740"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004602 - glutathione peroxidase activity
                     [Evidence IEA];
                     GO_function: GO:0043295 - glutathione binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HIP6620719.1"
                     /translation="MSIYDFTVQKQDGTDQSMAEYQGQVLLIVNTAPGCGLAPQYKEL
                     QELYDSYRGQGFVVLDFPCNQFLNQAPGSAEDINQICSLNYGTTFPRFAKITVNGSEA
                     SPLYRYLKKEKSTLLGGRIEWNFTKFLVDRQGRVVKRYLPTTSPLKLKEDIELYLEK"
     gene            complement(4303..5304)
                     /locus_tag="AC1PJC_001741"
     CDS             complement(4303..5304)
                     /locus_tag="AC1PJC_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FecCD family ABC transporter permease"
                     /protein_id="HIP6620720.1"
                     /translation="MIRHHNYLKIFTFLLILLFVIFLLSLSIGYSNSSFSDLIDIMSG
                     RASSSTLLIIGRIRLPRIIASIIGGASLALAGLLLQTLTRNPLADSGILGINAGAGLV
                     VALFVGLSSKINPVLLSLMPLFAMMGGGLTIFLVYWIARKKLYGIHPARLIITGVGIS
                     SMLSGIMVSIISQLDDFKMEYIVQWLSGRVNGGDWKTIAIYTPLLLLVWMATFSRSRS
                     LNIMNLNDQTAMALGLHLQRERRITLVLATALASLSVILVGNITFVGLIAGHIVRKWL
                     GNDHRVIIPATMIIGSFILLLADTIGRVLLVGTGIPTGIIVSLIGAPCFLWLLKQEG"
     gene            complement(5301..6326)
                     /locus_tag="AC1PJC_001742"
     CDS             complement(5301..6326)
                     /locus_tag="AC1PJC_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FecCD family ABC transporter permease"
                     /protein_id="HIP6620721.1"
                     /translation="MNKLVSSRYPQTKPKNIWLVFFIICLSFIAGVYLSLRFGAISYS
                     HQQLIETLTHPLTDSSAQDVIIDLRLPRMVAAILVGAAMAQAGAMMQGITRNPIADPG
                     LLGINAGAGLALIVAYALFGGLHYSQILLICLLGSCLAAGLVFGLAYQVQKGYNQLRL
                     ILSGAMVASLFSAIGQAITIYFDLSTAVIGWQAGGLVQVNWKMLAIIAPLIIIGLILA
                     QLFSHQLTILSLNETVAKNLGQRTLLMTLVLLGIVLLLSASAVALVGSLSFIGLIIPH
                     FIRMFTGKNYKLLLPLTAFAGASFLIWVDLVCRSINPPVETPISAVISIIGLPCFLWL
                     IRKEKHF"
     gene            complement(6340..7269)
                     /locus_tag="AC1PJC_001743"
     CDS             complement(6340..7269)
                     /locus_tag="AC1PJC_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIP6620722.1"
                     /translation="MKKFLAIFSLFVGLVFLTACSTSSSSTDVELSSMPKIEGITYHG
                     DIPKNPKKVVNFAYSYTGYLLQLGIDVSSYSLDLEKNSPVFGDKLKDVPQLTTADTEA
                     IAAQKPDVILVFAGDDNLETLKEIAPVIEITYGKSDYLKMLTDIGQIFGKEKEAQAWL
                     DQWDKKVATAKEELKGLIDTSSTFTVMDFFDKNIFLYGNNFGRGGELIYRALGFAAPA
                     KVQEDIINKEGWFGVSQEALPEYVGDYVLVNVNDKTKEAAASLKESDIWKNLPAVKNG
                     HVIEIDYNLFYFSDPMSLDLQIDAFVSEIQKLQ"
     gene            complement(7282..8067)
                     /locus_tag="AC1PJC_001744"
     CDS             complement(7282..8067)
                     /locus_tag="AC1PJC_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6620723.1"
                     /translation="MSSIQAENIQVSYDNRIIIDELSTSIPKGNITTIIGANGCGKST
                     LLKALTRIIPVQEGAIYLDGQAISQLPTKEVAKKLALLPQVLEATEGISVYELVSYGR
                     FPHQNGLGHLTDQDREKINWALEVTQTAPYARLPVDDLSGGQRQRVWIAMALAQDTDT
                     IFLDEPTTYLDLNHQLEVLELLKELNQSRQKTIVMVLHDVNLSARFSDYMIAMKEGDI
                     RYHGSVSNIMTTEILRDIFSIEPQLMQVAGQDYPILLTYDLKK"
     gene            complement(8219..9664)
                     /locus_tag="AC1PJC_001745"
     CDS             complement(8219..9664)
                     /locus_tag="AC1PJC_001745"
                     /EC_number="6.3.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013990079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-
                     lysine ligase"
                     /protein_id="HIP6620724.1"
                     /translation="MITIERVLEILKADANFRYIKQNDQTDSTWTDVQFDALSYDSRT
                     VSPTTLFFAKGLAFKKEFLEKAIEAGLAFYVSEIDYEVGIPAIIVHDIKQAMSLIAME
                     FHGHPQKQLKLLAFTGTKGKTTAAYFAFNILKINHKPAMLSTMNTTLDGKTFFKSTLT
                     TPESLDLFAMMAEAVKNGMTHLIMEVSSQAYLVKRVYGLTFDVGVFLNISPDHIGPIE
                     HPTFEDYFYHKRLLMDNSRAVIVNAGMDHFEVVKEQVSSKDHDFYGPTSENQISQSAG
                     FDFTATGKLAGHYDIQLIGGFNQENAIAAGLACLRLGASLEDIHTGIAQTNVPGRMEV
                     LTQQNGAKVFVDYAHNGDSVKKLIDVVLEHQTGKVFLILGAPGNKGESRRKDFGLLLN
                     DYPQIEVILTADDPNREDPAAIAEQIRAHMTRPSDFILDREEAIRTAMSQTSSPKDAV
                     IIAGKGADAYQIVNGEKAAYDGDLEVAKQYL"
     gene            9810..10556
                     /locus_tag="AC1PJC_001746"
     CDS             9810..10556
                     /locus_tag="AC1PJC_001746"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HIP6620725.1"
                     /translation="MFYSYLRTLLTFLLWAINGNIHYHDREKILPQEENYILIAPHKT
                     FWDPVFLGYAAAPKQFIFMAKKELFKDRGFGWWISKCGAFPIDRDNPGMAAIKYPVNM
                     LKKSDRSLVMFPSGSRHSSELKGGVAVIAKSAKVKLMPATYVGPMTIKGLLAGERIDV
                     AFGNPIDVSDIKRMDDTGTAEVTSRIEAEFKRLDDHAASFQTKKKPNILTYIYRIPVL
                     LLVALILGLTYAFSYIASFFWQPSTQLDKK"
BASE COUNT         3185 a         2167 c         2332 g         2906 t
ORIGIN      
        1 ggtctatacc atataataaa gaaaaacaag aaatggtata gaccaaagag gtgtattatg
       61 aaaattcatg tagtaaacaa tcaagttgaa ggagcaactg tagcattaga cattttgaaa
      121 gaaaaattga acggaggtgc caaggtatta ggtttggcaa caggctccag tccgttagaa
      181 ttttacagat tgattcgtga gtcggattta gacttttcgg atgtgacatc tgtaaacttg
      241 gatgagtatg ttggtctagg tgaggagagc gaccaatcct atattcattt tatgaaggaa
      301 aatcttttca atgacaaacc gtttaaacaa tcttatttac cgaatggttt ggcgacagat
      361 gtagttgctg aaacagaacg ttacaataaa attttggctg aacatccagt tgatttccaa
      421 attttgggta tcggtcgcaa cggccatatc ggttttaacg aaccaggtgc tccatttgat
      481 ggtcagaccc atctggttga attggcgcca tcaaccattg aagccaatgc acgcttcttt
      541 gacaatccag aagatgtgcc aaaacaagct atctccatgg gcatcgccaa cattatggca
      601 gccaagacca ttgttctcat ggcctatggt caggaaaaag ctgacgccat taaggcgact
      661 gtggaagggg cagtgacaga agatatccca gcaagcgtcc tccaaaacca tgacgatgtc
      721 gttcttatcc tcgatcaagc agctgcaagt aaattagcat aataaacaaa accgactacc
      781 atttttggca gtcggatttc ttatttttcg aggtcaactt ctacacgatt gcggtggcgg
      841 aaagagatga ccagcatcat aaatgaacta gcaaccagaa tagcggcaat caaggttaga
      901 tggtggtgga aggctatcag aagaatgatg gtagtgaata ctacaatagc atattgaagc
      961 caaaccatct tatctagttg ataaagatcc tggttgtagc gactggtcat caggattcct
     1021 ataaagtaga ggaagtaacc aatgaggagg aaaggcaagc ccaaactagc atgctcacca
     1081 ggtaagacct ccacagaaac tgtgaagaag ttgagaccca aaaccagtac catatgggca
     1141 tagagtaagg tggctacatt tgtcttttga tggtggttga tattgagata ggtttgcgaa
     1201 atgtaaaaca taaaggagaa cgccattgcc aagaagaaga gaacactagt gagcagatgc
     1261 gtctgaattg gataattctt caaaatcgca atgaccattt caccaaaggt gataatagta
     1321 atcagctggc agcgttctac gatatgagga aagttcatca catcatggct gagtttgtct
     1381 ttgaaaaaat aggaaatgaa aaatggaaga taaaaaagca agaggctctt ttcatcatag
     1441 gtccagaaat tgaagtaaat agctaccaaa gccaagaaaa ataccagcaa ataaatccca
     1501 aacatataga gactattttt tatatctgcc gtaaaaccga tttttcgacc acgaaggtag
     1561 tactgcaagc aaagtagcaa ataagacagg gtcaaaaaga tagtaaaggg tagggctgtc
     1621 gctttaaaat catgactaaa gtttagggat aattgcccca ccacaaacat agaagcgatg
     1681 atagtgaaaa tatccagcaa atctcgctca ccatatttgt tgaggtaaat cgtctcatta
     1741 atccacaagg tcatgataat caagtttgca gtgataaaag ttagaatttc cctgagtccg
     1801 atatggtcac cgtgcaaaag tccagtcagt gaagaagtag ctaatacaaa gaccaagtca
     1861 taaaacaatt catagttgga tacgcgtttt gcgataattt cagacatgtc aatctccttt
     1921 taaaaaaatc tgaaatatta taccatacga aaagggagga tgtcatctct ctttatatct
     1981 tatagtgtcc agtccaagtc tggtccgact gggacaatac ctgttgggtt aatggttttg
     2041 tggctaccgt agtagtgctg tttgatatgg tcaaagtcaa ccgtctccgc aataccagag
     2101 tggttgtaaa tccgcttggt ataatcccac aagtttggat aatcaaccaa ggccttgata
     2161 ttgcatttga aatgcccaaa gtaaacagga tcgaatcgca ccaaagtggt aaagagtcga
     2221 atatcagcct ctgtcagctg attgccaacc agatagttct tatcagccaa atgctcttct
     2281 agtttatcca aggcagcaaa aaggttcttg acctcttttt catagactgc ctgactggtt
     2341 gaaaaacctg ccttgtagac tccgttgttg atgtttggat agacaaaatc attcatggca
     2401 tcaatctcgg cttgcaggtt tgctggataa tagtcatcgt aatttccagt aatatcatta
     2461 aaagcagagt taaacatgcg catgatttca gccgattcat tgctgacgat ggtatttgtt
     2521 tctttgtccc acaggacagg aacggtcacc cggccagaat agtgtggatc agccttcaaa
     2581 tatacctgat agagataatc gctgttaaag aggggatcct tgataacacc aggaccgtcc
     2641 gcaaatgtcc agccattttc taacatgagg ggatgaacga cagacaagga aatatggtct
     2701 tccaagcccc tcaattttcg cataatcaag gtccgactag cccaaggaca agccagagaa
     2761 atatagaggt ggtagcgacc agactcagcc ttgaaaccgc cctctcctgt tgggcctgcc
     2821 tgtccgtctg gcgtaatcca gttgcgaaat tgtgtgacag tacggacaaa cttaccgcct
     2881 gttgacttgg tgtcatacca ttgatccacc catttgccat cttgtaaaag tcccatgaat
     2941 tttctccctt actgaaaaaa tgggaaatcc aataggatga ttggatttcc tttgtaaaaa
     3001 aacatatcac taactagtgt tataaacttt tttcaaaaag agtcaagcta tatgatttgt
     3061 gatacaatag tcccatgaga ttggacaaat gtttagagaa agccaaagtt ggctcgcgta
     3121 agcaagttaa aaaacttttc aaagcccagc aaatcaagat taacggacaa gcagctcaaa
     3181 gcctaagcca gattgttgac ccagagttac aaactatcca agtttcgggt aaaaaagttg
     3241 ccttagaagg ttctgcctat tatttgctcc ataaaccagc aggtatcgtt tctgcagtga
     3301 cagaccagga gcatcagaca gtcatcgact tgatttctcc gcaagacagt agggaaggtc
     3361 tctacccagt cggtcgcctg gacagggata ccgaaggcct agtcctcatt accaacaatg
     3421 gtccgctcgg ttatcgcatg ctccatccca gccaccatgt ggacaaggtc tactatgtgg
     3481 aggtaaatgg atgcttggct gaggatgctt caaaattttt tgcctcaggt gttactttct
     3541 tggatggaac acggtgtcag cctgcagatt tgactgtctt ggaggcttct ttggaccata
     3601 gcagagcgac catcaagctg gcagaaggta agtttcatca ggtcaaaaag atgtttttag
     3661 cctatggtgt caaggtcact tatctcaagc ggatttcctt tggtggtttt gaactggggg
     3721 atttggaacg aggtgcatac agacaactca caccaaatga aatggaacat ttattcactt
     3781 attttgacta gaggaggata tataatgagc atttatgatt ttacagtaca aaaacaagat
     3841 ggaacagatc agtccatggc tgagtatcaa ggacaagttt tacttatagt caatacagcg
     3901 ccaggttgtg gattggcacc acaatacaag gaactacagg agctatatga tagctatcga
     3961 ggccaaggtt ttgtagtgtt ggatttccct tgtaatcaat ttttaaatca ggctcccggt
     4021 tctgctgaag acatcaatca gatctgtagc ttgaattatg gtacaacttt tcctcgtttt
     4081 gctaaaatta ctgtgaatgg atctgaagct agtccgctat atcgctatct taagaaagaa
     4141 aaatcgacct tattgggagg tcgaattgag tggaatttta ccaagttttt ggtagataga
     4201 caagggcgtg tggtcaaacg atatttacca acaactagtc cattaaaact taaagaggat
     4261 attgaacttt acctagaaaa ataacaagaa ggctggagtc atctagcctt cttgttttag
     4321 taaccacaga aaacagggag cgccgataag ggagacgatg atgccggttg ggatgcctgt
     4381 tccgacaagt agtacccgtc ctatggtatc cgctagaagt agaatgaagc ttcctattat
     4441 catagtagct ggaatgatga cacgatggtc atttcctaac catttgcgca caatgtgacc
     4501 agcaatgagg ccaacgaagg tgatattacc aactaaaatg acactaagag aggctagggc
     4561 ggtagccaat accaaggtaa tccgcctttc acgctgtaag tggagtccca aagccatggc
     4621 tgtctggtcg tttagattca taatattgag tgagcgactt cgactaaacg ttgccatcca
     4681 caccaataga agaagaggag tatagattgc gatagtcttc caatctccac catttactcg
     4741 accgctgagc cactggacaa tgtattccat cttaaagtca tctaattggc tgatgatgct
     4801 gaccatgata ccagacagca tgctcgaaat tccaactccc gtgataatta agcgtgcagg
     4861 atggatgccg tacagcttct tacgtgcaat ccagtaaact agaaaaatgg ttaatccacc
     4921 gcccatcata gcaaatagag gcatgagact caataagaca gggttgattt ttgaagagag
     4981 accgacaaat agtgccacaa caagaccagc tcctgcgttg attcctaata ttccagaatc
     5041 tgccagagga ttgcgggtca aagtttgcag caacaaaccc gccaaagcca gagaagcccc
     5101 tccgataatg gaggcgatta ttctaggtaa gcgaattcgt ccaatgatca gtagagtcga
     5161 tgaactggca cgcccactca tgatgtcgat gagatctgaa aaggatgaat tgctatagcc
     5221 gatagataag gaaagtagga aaataacaaa taaaaggatt agcaggaatg tgaatatttt
     5281 tagatagttg tgatgtctta tcaaaagtgt ttctcctttc taatcaacca taggaagcaa
     5341 gggagaccaa tgatactgat gactgcgcta atgggagttt caacaggtgg attgatagaa
     5401 cggcaaacca aatctaccca gatgaggaaa ctagcccctg caaaggcagt taatggcaaa
     5461 agtagcttgt aatttttccc tgtaaacatg cggataaagt gaggaataat gagcccgata
     5521 aaagaaagcg agcccacaag agctaccgca gaagctgaga gtagaaggac aattcccaac
     5581 aaaaccaagg tcatcagtaa ggttcgttga cctagatttt tagcaacggt ttcgttgaga
     5641 ctcaggatgg tcagctgatg cgaaaagagt tgagcaagga tgaggccaat gatgataaga
     5701 ggagcgatga tggccagcat cttccagttt acctgtacca atccccctgc ttgccagcca
     5761 atcactgcag ttgataaatc aaagtagata gtaatagcct gaccaatagc agaaaataga
     5821 cttgctacca tggcgccaga taaaattaaa cgtagttgat tgtagccttt ttgcacctga
     5881 taagctagac caaagactag gccggctgcc agacaggagc ccagtaaaca tattaataaa
     5941 atttgactgt agtgcaaacc accgaacaga gcataggcaa caatgagagc aagtcctgct
     6001 ccagcattga ttcctaataa gccaggatcg gcaatcggat tgcgtgtaat tccttgcatc
     6061 attgccccag cttgggccat ggcagctccc accaagatgg cggctaccat tctaggcaag
     6121 cgcaaatcga tgataacatc ctgagcggaa gaatctgtca gtggatgcgt tagggtttct
     6181 atcagttgtt ggtggctata agaaatagct ccaaagcgta aactaagata gactccagct
     6241 atgaatgaaa gacagatgat gaaaaaaaca agccaaatat tctttggctt tgtttgggga
     6301 taacgagaac ttactagttt gttcatatat ccagtccttt tactgaagtt tttgaatttc
     6361 tgagacaaag gcgtcaattt gtaaatctaa agacatcggg tcggagaagt agaagaggtt
     6421 atagtctatc tcgatgacgt gaccattctt tacagcaggt agatttttcc aaatatcact
     6481 ttctttgaga gaggcagctg cttcttttgt tttatcattg acgttaacaa ggacatagtc
     6541 gccaacatat tctggaagag cttcttgaga taccccaaac cagccttctt tattgatgat
     6601 gtcttcttga acctttgcag gagcggcaaa accgagagcg cgatagatta attctccacc
     6661 acgaccaaag ttattaccgt aaaggaagat gttcttatcg aagaagtcca tgacggtaaa
     6721 tgttgaactt gtatcaatca atcctttcaa ttcctctttc gcagtagcaa ctttcttatc
     6781 ccattgatct aaccaggctt gtgcttcctt ttcttttcca aaaatctgac caatatctgt
     6841 cagcattttc aagtagtcac tctttccata agtgatttca ataactggag caatttcttt
     6901 cagtgtttct aagttatcat caccagcaaa tactagaatg acatctggtt tttgtgcggc
     6961 aattgcttct gtatctgccg ttgtcaattg tggaacatcc tttagtttgt ctccaaatac
     7021 aggactattt ttttctaaat ctagactata gctagataca tcaattccta attgtaagag
     7081 atagcctgtg taagagtaag caaagttgac aactttttta ggattttttg gaatgtcacc
     7141 gtggtaagta attccttcaa tttttggcat gctagacaat tctacgtctg ttgaagagga
     7201 agaggtagaa caagctgtta agaaaaccag cccaacaaat aaactaaaaa tagctaaaaa
     7261 ctttttcatt ttttctcctt attatttttt taaatcgtaa gttagcaaaa tagggtaatc
     7321 ttgaccagca acctgcatca attgaggttc aatgctaaaa atgtccctca gtatctcagt
     7381 tgtcataata ttggacacag acccatggta gcgaatatct ccctctttca tggcaatcat
     7441 ataatctgaa aatcgagctg ataaattgac atcgtgaagg accatcacaa tggttttctg
     7501 tcggctttga ttcagttctt ttaaaagttc taagacttcc aattgatgat tgagatcaag
     7561 ataggttgtt ggttcatcta agaaaatggt atccgtatct tgggcaagtg ccatcgcaat
     7621 ccacacacgc tgcctctgac cacctgataa atcatcaact ggtaacctag cgtagggagc
     7681 ggtctgagta acctccaagg cccagttgat tttctctcta tcctgatcag tgagatgccc
     7741 cagcccattt tgatgcggaa agcgaccata ggagactagt tcatagacgg aaatcccttc
     7801 agtcgcttct aagacctgag ggagcagggc caattttttt gcgacttctt tggttggcag
     7861 ttgtgaaatg gcttgtccat ctagatagat agccccttct tgaacaggaa taatccttgt
     7921 caacgcctta agcaaggtcg attttccaca gccattggca ccaatgatcg tcgttatatt
     7981 tccttttgga atacttgttg ataattcatc aataataatc cgattgtcgt aagagacttg
     8041 gatattttcc gcttgaatag aagacacaaa ctcctccttt ccagaatatg attcattaat
     8101 aatttgttcc gaccagtatt atatcaaaaa aatttaccaa aacaaagagt tttctgaaaa
     8161 ttttaattta atgagaattg ttataaaaaa gtccttgtct gtgaacaagg accgtatgtt
     8221 acaaatattg ttttgctact tccaaatcac cgtcataggc ggccttttcg ccgttgacaa
     8281 tctggtaggc gtcagctccc ttgcctgcga tgatgacggc atctttcgga gagcttgtct
     8341 gactcatggc tgtgcgaata gcttcttcgc ggtccaagat aaagtcactt gggcgagtca
     8401 tgtgggcacg gatttgttca gcaatagcag ctgggtcttc acggttgggg tcatcagctg
     8461 tcagaatgac ctcaatctgc ggatagtcgt tgagcagcag tccgaagtcc ttgcggcgac
     8521 tttctccctt gttaccagga gctcccaaaa tcaaaaacac cttgccagtc tggtgctcta
     8581 agacgacatc aatcagcttc ttgacactat cgccgttatg ggcgtagtcc acgaatacct
     8641 tggcaccgtt ttgctgggtc aggacttcca tacgaccagg gacattggtt tgggcaattc
     8701 ctgtgtgaat atcttccaga cttgctccca agcggagaca ggcgaggccg gctgcgatgg
     8761 cattttcttg gttgaagcca ccgatcagct ggatgtcgta atggccagcc aatttgccag
     8821 tcgctgtgaa atcaaaacct gctgactgac taatctggtt ttcagaagtc ggcccataaa
     8881 agtcatggtc tttggagctg acttgctctt tcacgacttc aaaatggtcc attcctgcat
     8941 tgacaataac cgctctgcta ttgtccatca aaagacgctt atggtagaag tagtcctcaa
     9001 aggtcgggtg ctcaatgggg ccgatgtggt cggggctgat gttgagaaaa acgccgacgt
     9061 caaaagtcag cccgtaaacc cgcttgacca agtaagcctg gctggacacc tccataatca
     9121 agtgagtcat gccgttcttg accgcctccg ccatcatggc aaagaggtct aggctttcag
     9181 gcgtggtcag ggtggacttg aagaaggttt ttccgtccag cgtggtgttc atggtcgaaa
     9241 gcatggcagg cttgtggttg attttaagga tgttaaaagc aaaataagcc gccgttgtct
     9301 tacccttggt gccggtgaag gccaggagtt tgagctgttt ctggggatga ccatgaaatt
     9361 ccatggcaat caggctcata gcctgcttga tgtcatggac gatgatagca ggaatgccga
     9421 cttcgtagtc gatttcagag acgtaaaaag ccagtccagc ctcgatagct ttttccagaa
     9481 attccttctt aaaggccaaa cccttggcaa aaaagagggt cgttgggcta acagtccggc
     9541 tgtcatagct gagagcgtca aactggacat ccgtccatgt gctgtcagtt tggtcattct
     9601 gtttgatata gcggaagtta gcatccgcct tcaatatttc taatacacgt tcaattgtaa
     9661 tcatgcttct attgtaaacc tatcgaggat atttgacaag tctgggctat gtaaatagtg
     9721 ggtattttga ccgtaaattt gaatgaatat gacatttcgt cctgacgcaa atttgtgcta
     9781 taataggagg gattaaaaag gagaagttta tgttttattc ttatctacga acactattaa
     9841 ctttcttgtt gtgggccatc aatggcaata ttcactatca tgatagagag aagattttgc
     9901 cacaggagga aaattatatt cttatcgctc cgcacaaaac cttctgggat ccagtctttc
     9961 ttggctacgc agctgctccc aagcagttca tctttatggc taaaaaagaa ctcttcaagg
    10021 accgcggttt tggttggtgg atttcaaaat gtggagcctt tcccattgac cgtgacaatc
    10081 ctggcatggc agccatcaag tatccagtta acatgttgaa aaaaagtgac cgttcgctgg
    10141 tcatgtttcc ttctggaagt cgtcattcat ctgagctaaa aggtggtgtg gcggtcattg
    10201 ccaagtcagc caaggtcaaa ctcatgccag caacctatgt gggtcccatg actatcaaag
    10261 ggctcttagc tggtgagcga atcgatgtgg cttttggaaa tcctatcgat gtttcggaca
    10321 tcaagcgtat ggatgataca ggtacagcag aagtaactag ccgaattgag gctgagttca
    10381 aacgcttaga tgaccatgcg gcatctttcc aaaccaagaa aaaaccaaat atcttgactt
    10441 atatctaccg tatcccagtt cttttgctgg ttgctcttat cttgggattg acctatgcct
    10501 ttagctatat tgccagcttc ttctggcaac caagtactca gttggataaa aaataagtaa
    10561 atgaaactcg cagcttgcgg gttttttata
//
LOCUS       DBNFCX010000079        10301 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.079, whole genome shotgun sequence.
ACCESSION   DBNFCX010000079 DBNFCX010000000
VERSION     DBNFCX010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 10301)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10301)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10301
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.079"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            52..387
                     /locus_tag="AC1PJC_001747"
     CDS             52..387
                     /locus_tag="AC1PJC_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase BlpT"
                     /protein_id="HIP6620726.1"
                     /translation="MEKTQIIQDVLALIQDLNRAFQADKVGTADEQRLQHNLTETTRI
                     LSEAESVTNTELIAIEKFYRSTSFLVGLGDLRLSETSRQAWRAFDRYYYETIREELKL
                     YGGSAIAQV"
     gene            476..1177
                     /locus_tag="AC1PJC_001748"
     CDS             476..1177
                     /locus_tag="AC1PJC_001748"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6620727.1"
                     /translation="MSYIQVKNSSKYYQMGDATIVANDSVSFEIEQGELVIILGSSGA
                     GKSTLLNILGGMDSNDEGEVWIDGVDIAKLSSHELTNYRRDDVGFVFQFYNLVANLTA
                     KENVELAAEIVKDALDAEEVLEQVGLGHRINNFPAQLSGGEQQRVAIARAVAKKPKIL
                     LCDEPTGALDYQTGKQVLQILQDMSRKQGATVIIVTHNSSLAPIADRVIRMRDARVHS
                     VELHAEPQDIASLEY"
     gene            1189..4554
                     /locus_tag="AC1PJC_001749"
     CDS             1189..4554
                     /locus_tag="AC1PJC_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HIP6620728.1"
                     /translation="MKKKIYWKDMRQSLLSSKGRFLSIFSLMMLGALALTGLKVTAPN
                     MEKTAQAYIASHRTMDLAVISGLGLSQADLDELETIEGATLEAGYFKDVVTNEGQTAI
                     RLFSAPKTLSTYKLVEGEMPSQKGEIALSASFKNRYKLDDTVQVTESDKDGKILTQTS
                     FTLVGFVASAEIWDNETMGMAASGDGQLGGYGLVSQDTFKSEVYTIARIRYDDLVDLP
                     YYSQAYQDRLDQHQEDLEKLLANNDEQRLATIQSDGQTDISKGEEEIAQAQSQLEQAE
                     SELETGEEQLATGRREFARGRAKVVQTEAELRAAQAQLLKSKFELEESKKELDGRKAQ
                     LDQTASFLDGYQMELETSAQQLEEAKQELDSQNAQLSQTASQISTGRASWFQAQQELD
                     LEIANHLQEGQTLSAYPDLLARQEGLDVEKGRLDQMESAHEQANQAYLQGYDYYQTKQ
                     NEYNSNLAQYQTWNQEYQAGLARYQAGLSQYEQGIAAYNKGVEDYEWGLSQLESSNQL
                     LRQEELRLEKADKELSQAQSQFSEKKATADQEISQAQTEIAQAKSDLSKLEKAPYQVY
                     TRSSLPGGDGYTTYSNATRSIAAVGNVFPVVLYLVAALVTFTTMARFVDEERTQSGLL
                     KALGYTNRQIMAKFILYGLAAGLVGTIVGIIAGNLLLSPLISNIITQTTVIGPAKLHF
                     YPLWTGLALLLSLASSVLPAYLVARRELTEKPAQLLLPKPPVTGSSIWLEKWPAIWSR
                     LSFTHKVTARNIFRYKLRMLMTIFGVAGTVALLFGGLGIRSSISGVVQRQFGELIHYD
                     MLVVENSRATEEELDKLTHFLQSDQVRQSLPVAFEQLNQTVEENGQRKNLSISLYISD
                     RRDFGNQVSLESSTGQPIKLSDRGIVLTEKLAQIYGVSVGDKLSLTLEDKEVSVRVEA
                     VADMYAGHFIYMTDSYYEQVTGKQKTANAYLVQLKDSQLGHIQTLASQLLAMPAVRSL
                     VQNTSLIDMLTTIAGSLQTIMTILVILSILLGLVILYNLTIINMSERIRELSTIKVLG
                     FHNKEVTMYIYRETIALSLIGMLVGLVGGIYLHKLLLAMIGSDSIRFNPSVGLEVYLI
                     PILAISGILAVLGWYVNHHLRKVDMLEALKSVD"
     gene            4929..6236
                     /locus_tag="AC1PJC_001750"
     CDS             4929..6236
                     /locus_tag="AC1PJC_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620729.1"
                     /translation="MKKISDLGLTGRKLVGEGLILVFIGIGFLIAGWQFPGLILRFVH
                     AGLFFLALYELSMTFFRKKKSSESIIALVGKAVLFGILASLDLAVQIPLYFAAIFVGI
                     YQLFTALINFITFYLYRKDGVQPRIRFLIDGVWLSLLGIASLFVSGTQLVVQTIVIGG
                     YLILYGLTNLRDGFLFEEAIEQQNLKRHVRLPLPLFLAALIPRMTLQKVNDYLADNEG
                     QTAQSIYNRHKEIAEFPALEVFVHVGEEGFGAVGHVDLSYKGQVYGFGSYDVLSERLG
                     GAIGDGVLFKAERQAYIDFCNQEGMTMLGYQLALSSEQEKAVETRLAEIEGLLLPWQP
                     SAEKVSRRSDGQPIEMYAYRMKEAIGAALFKFKKSKFKTYFVLSTNCVLLADSVIGQA
                     GTDVLGLRGFIAPGTYQSYLDQEYEKPHSLVVAKNIYYRKEKS"
     gene            6312..8948
                     /gene="polA"
                     /locus_tag="AC1PJC_001751"
     CDS             6312..8948
                     /gene="polA"
                     /locus_tag="AC1PJC_001751"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014932012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HIP6620730.1"
                     /translation="MKKNKLLLIDGSSVAFRAFFALYNQIDRFKSPTGLHTNAIYGFN
                     LMLDHMMKRIEPTHILVAFDAGKTTFRTEMYADYKAGRAKTPDEFREQFPFIRQMLDA
                     MGVKHYELDQYEADDIIGTLDKMAERTEIPFDVTIVSGDKDLIQLTDENTVVEISKKG
                     VAEFEEFTPAYLMEKMGITPTQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLTEFGSL
                     DGIYENIDSMKASKMKENLIADKEKAFLSRTLATIDTQAPIEIGLDDIVYQGPKLEEL
                     GQFYDDMGFKQLRAQLGTTSSQEEAVLDFQIVTEISPAMLKQDQFFYFEILGENYHRE
                     DLVGLAWGDKEKIYVGGPELLDSPVLRDFLENQTIKTYDFKRGKVLLDRKEITLPPAT
                     FDSRLAKYLLSTVEDNSLTTIANLYGQTSLVPDEAVYGKGAKLDLPEREVFFPHLARK
                     VQVLIETEEPMLTKLEENQQLDLLFDMELPLANVLAKMEIAGIKVEAETLKAMQSENE
                     VLIDQLTKEIYELAGQEFNINSPKQLGTILFEDMGLPLEYTKKTKTGYSTAVDVLERL
                     APIAPVVSKILEYRQITKLQSTYVVGLQDAILEDGKIHTRYVQDLTQTGRLSSTDPNL
                     QNIPVRLEQGRLIRKAFVPSLENSVLLASDYSQIELRVLAHISQDQHLIEAFQQGADI
                     HTSTAMRVFGIEKAEDVTPNDRRNAKAVNFGVVYGISDFGLSNNLGITRKEAKAYIDT
                     YFERFPGIKNYMETIVREARDKGYVETIYKRRRELPDINSRNFNVRNFAERTAINSPI
                     QGSAADILKVAMINLDKALTEAGLATRMLLQVHDEIVLEVPVAELETVKAMVKETMES
                     AISLSVPLIADENEGPTWYEAK"
     gene            8961..9716
                     /locus_tag="AC1PJC_001752"
     CDS             8961..9716
                     /locus_tag="AC1PJC_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HIP6620731.1"
                     /translation="MKKIVLCIGLCSLLLAGCGKTSQKAEKTPASSGEEFSTTLPILQ
                     EKQDTTNEQFNVLANAELVAVNSTPPADETQKGHKIYAANNGVAEKDENGNIKEYFRY
                     YDVPSTWTINAENTQDETVAAVYDVKEGSSNYMVQLYNINAFNQSPLEDGRNMTPEEL
                     EARMVETNHSFSEKTVVTINGQEWQVGRQLLTDQKLARLTFYRMESTAAYDDSVVVGS
                     IYYSLDPGTDKDRTNLKKVIGQVKDVVYQIAKK"
     gene            9836..10273
                     /locus_tag="AC1PJC_001753"
     CDS             9836..10273
                     /locus_tag="AC1PJC_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HIP6620732.1"
                     /translation="MSYSFQNPSQDIIFDYLKNAKTIAVVGLSSREETAAYRVSKLMQ
                     EAGYKIIPVNPKAAGGTILGELVYSSLAEIDQPIDIVDVFRRSEFLPEVAQEFIQSNA
                     KVFWAQLGLESQEAEKLLRQAGRNDIVMNKCIKIEYLEMKEQY"
BASE COUNT         3012 a         2055 c         2412 g         2822 t
ORIGIN      
        1 tctttgtcta atttgatata ctaaatttat caaaaactag gagggtcttt tatggaaaag
       61 acacagatta ttcaagacgt tttggccctc attcaagatt tgaatcgggc cttccaagca
      121 gataaagtag gaacagctga tgaacagcga ttgcaacata atctgacaga gacgacacgc
      181 atattgtcgg aggccgagtc ggtcaccaat acagaactga ttgcgattga gaaattctac
      241 cgttcgacca gttttttggt tggactgggc gatttgcgat tgagtgaaac cagcaggcag
      301 gcttggcggg catttgaccg atattactac gaaacgataa gagaagaact caaactctat
      361 ggcggctctg ctattgccca agtgtaaaag atgaaggaga gggtgaaaac cctcttttgt
      421 gctataataa gtagtaagaa tacagttgtt aggaagagaa gaagcgaggt gtgccatgtc
      481 ctacatccaa gtaaagaatt cgtcaaaata ctatcaaatg ggggatgcga ccattgtggc
      541 caatgacagc gtgtcctttg agattgagca gggtgagttg gtcatcattc tgggttcatc
      601 tggtgcgggc aaatccactc tgctcaatat cttaggtggc atggatagca acgatgaggg
      661 ggaggtttgg attgacggtg tggatatcgc caagctgtca agtcatgaac tgaccaatta
      721 tcgtagagat gatgtaggtt ttgtctttca attttataac ttggttgcca atctgaccgc
      781 caaggaaaat gtggaactgg ctgcggaaat cgtcaaggat gccttggatg ccgaggaggt
      841 cttggaacaa gttggactag gccatcgtat caataatttc cctgctcagc tttcaggtgg
      901 tgagcagcaa cgggttgcca ttgcccgtgc tgttgccaaa aagcctaaaa ttttgctttg
      961 cgatgaacca actggcgctc tggattacca aacaggtaag caggtcttgc aaatcctaca
     1021 agatatgtca cgcaagcagg gggcgacggt gattatcgtg acccacaata gttccctagc
     1081 ccctattgca gacagggtca ttcggatgcg ggacgcccgt gtgcactccg ttgagttaca
     1141 cgcagaacca caggatattg caagcctaga atattagtgg gtgaaactat gaaaaagaaa
     1201 atctactgga aggatatgag acaatctctg ctttcttcca aggggcgttt tttgtccata
     1261 tttagcctga tgatgctagg agctctagct ttgacaggtc tgaaagtaac agctcccaat
     1321 atggaaaaga cggcccaagc ctatatagcc agtcatcgaa cgatggattt ggcagtaatt
     1381 tcaggtctgg gacttagtca agctgacctt gacgaattag aaacgataga aggtgctact
     1441 cttgaagcgg gctactttaa agatgtggtt actaatgaag gacagactgc aattcggctg
     1501 ttttcagctc ccaagaccct atcgacctat aagctagtag aaggggaaat gcccagccaa
     1561 aagggggaaa tagccctatc agcttctttc aaaaatcgtt acaaattgga cgatactgtt
     1621 caagtgacgg agtctgataa ggatggaaaa atcttgacac agacaagttt tactcttgtg
     1681 ggctttgtcg catcagcaga aatttgggac aatgaaacca tgggcatggc tgcaagtggt
     1741 gatgggcagt taggtggcta tggccttgtt agtcaggata ccttcaaatc agaagtttac
     1801 actattgccc gtattcgcta tgatgatttg gttgatttac catattacag tcaggcctat
     1861 caagacaggt tggaccagca ccaagaagac ttagaaaagt tattggctaa caatgatgaa
     1921 caacgattgg caactattca gtcagatgga cagacagaca tttcaaaagg ggaagaggaa
     1981 attgctcagg ctcaatccca gcttgaacag gcagagtcag aactggaaac aggggaggag
     2041 caattagcga caggtcgtag agagtttgcg cgtggtaggg ctaaggttgt ccaaacggaa
     2101 gctgaattac gagctgccca agcccaacta ttaaaaagta agtttgaatt ggaagaaagt
     2161 aaaaaggaat tggatgggcg taaggctcaa ctagatcaga ctgcttcgtt tctagacggc
     2221 tatcagatgg aattagaaac gtcagcccag cagttagaag aggccaagca agaattggat
     2281 tcccaaaatg cccaactgag tcagaccgca tctcagattt ccacagggcg agctagttgg
     2341 tttcaagctc agcaagagtt agaccttgaa attgccaatc acttgcaaga aggtcaaacc
     2401 ctctcagcct atcctgactt gttggctaga caagaaggtt tggatgttga gaaaggtcga
     2461 ttagaccaaa tggaatctgc acatgagcag gccaaccaag cctatttaca aggttatgat
     2521 tactatcaaa ctaaacaaaa tgaatacaat agtaatctag cccagtacca aacttggaat
     2581 caagaatatc aggcaggttt ggcccgttat caagcaggtt tgagtcagta tgaacaaggt
     2641 attgcagcct acaataaagg agtagaagac tatgaatggg gactgagtca gttagagtct
     2701 tcaaatcaac tgctccgtca ggaagaactc cgtttggaga aggctgataa agagttaagt
     2761 caagctcaat cccaattttc tgagaagaaa gccacggccg atcaagaaat tagccaagct
     2821 caaaccgaga ttgctcaggc taaatccgac ttaagtaagc tggaaaaagc gccctatcag
     2881 gtctatactc gatcaagcct accaggtgga gatggctata ctacctatag caatgcgact
     2941 aggtctattg ctgcagtggg caatgtcttc cccgttgttc tctaccttgt cgcagctcta
     3001 gtgactttta ccactatggc ccgttttgtc gatgaagagc gaacacagtc aggtctcctc
     3061 aaggcccttg gttatacgaa tagacagatt atggctaagt tcattctcta tggtttggcg
     3121 gcaggtctgg taggaacaat agtcggtata atagcaggca atctcctctt gtctccactt
     3181 atttccaaca ttattacgca gacaaccgtg attggaccag ctaaacttca tttttatccc
     3241 ctttggacag gtttagcctt gctcctgtct ttggcttcct cggtcctgcc agcttacttg
     3301 gtggctcgtc gggagctgac agaaaaacct gctcagctac ttttacctaa gccacctgtt
     3361 acaggctcca gcatttggct agaaaaatgg ccagctatct ggtcgcgtct aagttttacc
     3421 cacaaggtga cagcccgcaa tatcttccgc tacaagcttc gtatgcttat gaccatcttt
     3481 ggagtagcag ggaccgtcgc ccttcttttt ggaggactgg gtatccgttc ctccatctca
     3541 ggagttgtcc aacgacagtt tggggagcta atccattatg atatgttggt ggtggaaaat
     3601 agcagagcta ctgaggaaga gttggataag ttaacacatt ttcttcagtc agatcaggtt
     3661 cgccaatcct tgccagtggc atttgaacag ctcaatcaaa cggtagaaga aaacggtcag
     3721 agaaagaatt tatcgattag tctctacatt tcagaccgtc gggattttgg aaatcaagtc
     3781 agtctggaaa gttcgacagg tcagcctatt aaactgagtg acagggggat tgttctcaca
     3841 gaaaaattgg cgcaaatcta cggggtctct gttggtgata agttatcact gaccttggaa
     3901 gataaggaag tttcagtcag ggtagaggct gtggctgata tgtacgcagg gcattttatc
     3961 tatatgacag atagctacta cgaacaagtg accggcaagc agaagactgc caatgcctat
     4021 ctggttcagt tgaaagacag tcagttgggg catattcaga ctcttgcaag tcaactccta
     4081 gcgatgccag cagtcagaag tttggttcaa aatacttctc ttatagacat gcttaccacg
     4141 attgcgggct cgcttcagac cataatgacc attctagtca tcctatccat cttgcttggc
     4201 ttggttattc tttacaacct tacaattatc aatatgtccg aacggattcg tgaattatcc
     4261 accatcaagg tactgggctt ccacaataaa gaggtgacca tgtacatcta tcgtgaaacc
     4321 attgcccttt cgctgattgg tatgttggtt ggactggttg gtggtattta tctccacaag
     4381 ctccttcttg ccatgattgg ttcggacagt atccgcttca atccatctgt cggactagaa
     4441 gtctatctca ttcctatctt agccattagt ggaattttgg ctgttcttgg ttggtatgtc
     4501 aatcaccatc tgagaaaggt ggatatgctg gaggccttga agtcagttga ttaaaacagt
     4561 ctgggaatag actgttttaa cccgagccta aaaacacgaa agcgaggaca gtctgggaat
     4621 agactgtttt aacccgagcc ttgaaatggg agagcgaggc acagtcttgg tttggaagga
     4681 attttaaaaa gagaatgaca gtcttgcgat tcaaaagagg ctgggcaaaa agcccaggac
     4741 cactactcag agttcgtgtc aacatctcag cgcagtggtt gattggcaga tttgttcgtg
     4801 tttcacactc caaatctgac ctaatcaact gtgcgggggt gggaagacga actcttttta
     4861 tcttggtcga attctttccc actccctttt ctgtaaacac aagtctagaa gtgtgctata
     4921 atcatctcat gaaaaaaata agtgatttag gattaacagg tcgaaaatta gttggagaag
     4981 gtctaatctt agtcttcatc ggtattggat ttttaattgc tggttggcaa tttccaggac
     5041 tgattcttcg atttgttcac gcaggtttat tctttttggc tttatatgaa ttgagcatga
     5101 catttttcag aaagaagaaa tcgagtgaaa gtatcattgc gctagttggg aaggctgttc
     5161 ttttcgggat cctagccagt ctcgatttag ctgttcaaat tcccctctat ttcgcggcta
     5221 tttttgttgg gatttatcaa ctttttacag ctcttattaa tttcattact ttttacctat
     5281 atcgaaaaga tggggtacag ccacgcattc gttttttgat tgacggagtt tggctatccc
     5341 tgttaggcat cgcctctctc tttgtatcag gcacacagct ggttgttcaa accattgtca
     5401 tcggaggtta tctgattttg tatggactaa ctaatctgcg tgatggcttc ttgtttgagg
     5461 aggctattga gcaacaaaat cttaagcgcc atgtccgttt gcccctacct ttatttttag
     5521 cagctttgat tcctcgtatg accctgcaaa aagtcaatga ttacttggcg gataatgagg
     5581 gacaaacggc tcaatctatt tataaccgcc acaaagaaat tgcggagttt ccagcattag
     5641 aagtctttgt acacgttgga gaagaagggt tcggagcagt tggacatgtt gatttgagtt
     5701 acaaagggca ggtctacggt tttggttcat atgatgtcct gtcagagcgt ttgggtggtg
     5761 cgattggtga cggagttttg tttaaagctg agcgtcaggc ctatattgat ttttgtaacc
     5821 aagaaggaat gactatgttg ggctatcaat tggcattgag ttctgagcag gaaaaagcgg
     5881 tagaaactcg actagctgaa atagaaggtt tactgcttcc atggcaacca agtgcggaaa
     5941 aggtctctag acggtcagac ggccagccta tcgaaatgta tgcctaccgc atgaaagagg
     6001 caattggggc agcacttttc aaatttaaaa aatcaaaatt caaaacctac tttgtcctct
     6061 caaccaactg cgtccttttg gctgattcag taatcggtca agcaggaaca gatgtcctag
     6121 gcttgcgtgg tttcattgct ccaggaacct accaatctta cctagatcaa gaatatgaaa
     6181 aacctcatag tttagtagtc gcaaagaaca tttattatcg aaaagagaaa tcctagtcac
     6241 tgactgggat tttctattat tccagccctc cctagtctac taaaacatac gtttcatgct
     6301 ataatagaga catgaaaaaa aataaattat tattaatcga tggctcttcg gtagccttcc
     6361 gtgctttctt tgcactttat aatcaaattg atcgttttaa gagtccgaca ggtcttcaca
     6421 ccaatgctat ctacggcttc aatctcatgc tggaccacat gatgaagcgg attgagccga
     6481 cccacattct tgtggctttt gatgctggaa agaccacttt ccgcacggag atgtatgcag
     6541 actataaggc aggtcgtgcc aagactccag acgaattccg tgagcagttt ccttttatcc
     6601 gtcagatgtt ggatgccatg ggagtcaagc attacgaact ggatcagtac gaggcagacg
     6661 atattatcgg taccttggac aaaatggcag agcggacaga gattcctttc gatgtgacca
     6721 ttgttagcgg tgataaggac ttgatccagc tgacagacga aaacaccgta gttgagattt
     6781 ctaagaaagg cgtagccgaa ttcgaagaat ttactccagc ctacctcatg gaaaaaatgg
     6841 ggattacccc tactcagttt attgacctca aggctttgat gggagataag tccgataaca
     6901 ttcctggcgt gaccaaaatc ggtgaaaaaa caggtctaaa actcctgaca gaattcggtt
     6961 cattggatgg tatctacgaa aacattgaca gcatgaaggc ttctaagatg aaagaaaacc
     7021 tgattgctga taaggagaag gccttcctat ctcgtacact tgctaccatt gatactcagg
     7081 caccaatcga aattggtctg gatgacattg tttatcaagg tccaaagcta gaagagctag
     7141 gacaattcta cgatgatatg ggcttcaagc aattaagggc tcagttaggt acgaccagct
     7201 cgcaagagga agcggtactc gattttcaaa tcgtaacgga aatcagcccc gctatgctca
     7261 aacaagacca gtttttctat tttgaaatct tgggtgaaaa ttatcaccga gaggatttgg
     7321 ttggtttagc ttggggggat aaggagaaaa tctatgtcgg agggcctgag ctacttgata
     7381 gtccagtctt gcgtgacttt ttagaaaacc aaaccataaa aacctatgac tttaagcgtg
     7441 gaaaagttct tctcgaccga aaagagatta cgctacctcc agctactttc gatagccgtc
     7501 tagccaaata cttgctttcc actgttgagg acaactccct aacaaccatt gccaacctct
     7561 atggtcagac cagtcttgtt ccagatgagg cagtttatgg caagggagct aagttagact
     7621 tacctgaacg cgaggtcttt ttcccacact tggcacgtaa ggttcaggtt ttgattgaga
     7681 cagaagagcc gatgctgact aaattagaag aaaatcagca attagatctt ttgtttgaca
     7741 tggagttgcc actggcaaat gttttagcta agatggagat tgctggtatt aaagtggaag
     7801 ctgagactct caaagctatg caatctgaaa acgaagtttt gattgaccag ttgaccaagg
     7861 aaatctatga actagctggt caggaattta atatcaattc gcctaagcag cttgggacca
     7921 ttctctttga agatatgggc ctacccttgg aatataccaa gaagaccaag acaggctatt
     7981 caacagcagt ggatgtctta gaacgcttag cgccaattgc accagttgtt tcaaaaatct
     8041 tggaataccg tcagattacc aagcttcaat caacttatgt agtcggcttg caggatgcca
     8101 ttttagaaga tggtaagatt catacccgct atgtacagga tttgacccaa acaggtcgcc
     8161 tatcttcgac ggatcctaac ttgcaaaata ttcctgttcg tctagaacaa gggcgcttga
     8221 ttcgtaaggc atttgtgcca tctcttgaaa atagtgtcct tttggcatcg gactattcac
     8281 agattgaatt gcgcgtcttg gctcatattt ctcaggacca gcatttgatt gaggccttcc
     8341 agcaaggtgc agatattcac acttcgacag ctatgcgggt ctttggtatc gaaaaagctg
     8401 aggatgtgac accaaatgac cgtcggaatg ccaaggctgt aaacttcggt gtcgtctatg
     8461 gtatttcaga tttcggtcta tccaataact tggggattac acgtaaggaa gctaaagcct
     8521 atatcgatac ctattttgaa cgcttcccag gaattaagaa ttacatggaa accattgttc
     8581 gtgaggcacg tgataagggt tatgtagaga cgatttacaa acgccgtcgt gaattaccag
     8641 atataaactc tcgcaatttc aatgtccgta attttgcgga acgaacagcc atcaactcac
     8701 caattcaagg ttcggccgca gatattctca aggtagccat gattaatctt gacaaggctt
     8761 tgactgaagc aggtcttgcg acacgtatgt tattgcaagt acacgatgag attgttttgg
     8821 aagtcccagt ggcagagcta gaaacggtaa aagctatggt aaaagagacc atggaatcgg
     8881 cgattagcct gtctgtacca ttgattgcgg atgaaaatga gggaccgaca tggtatgaag
     8941 ctaagtaaga aaggaagagt atgaaaaaga tagttctttg tattggtcta tgtagtcttc
     9001 tgctcgcagg ttgcggaaaa acatcgcaga aggcagagaa aacaccagct tcctcagggg
     9061 aagagttttc aaccacttta ccgattttac aagaaaagca ggatactacg aacgaacagt
     9121 tcaatgtgtt agcaaatgca gagcttgtag ctgttaatag tacaccacct gctgacgaaa
     9181 cacaaaaagg ccacaagatt tatgcggcca ataatggtgt tgctgaaaaa gatgaaaatg
     9241 ggaatatcaa ggaatatttc cgttattatg atgtgccatc tacttggaca attaatgcag
     9301 aaaatactca ggatgagaca gtcgctgcag tctatgatgt taaagaaggt tccagcaatt
     9361 acatggtcca actctataat atcaatgctt ttaatcagtc tccattggaa gacggtcgca
     9421 atatgacgcc ggaggaatta gaagcacgga tggttgaaac aaatcattct ttcagtgaaa
     9481 agacggttgt cacaatcaat ggtcaggaat ggcaggttgg gcgacagtta ttaacagatc
     9541 aaaaattagc tcgtctgact ttttatcgga tggaatcaac agctgcttat gatgactccg
     9601 tggttgtggg ttcaatctat tattccttag atccaggaac cgataaagat cggaccaatc
     9661 ttaaaaaggt tatcgggcaa gttaaggatg tcgtgtacca aattgctaaa aaataatcaa
     9721 ggtagacaag ctataatcag taacgagtta aaactgacaa gattgtgtta tagcacacct
     9781 tattcattaa gcttttattg attctaacat ttaatataca ttaaaggagg tctctatgtc
     9841 ttattccttc caaaatccta gtcaggacat tatatttgac tatctgaaaa atgctaagac
     9901 cattgcagtg gtcggtttgt ctagtcgaga agagacggca gcctaccgcg tttccaagct
     9961 catgcaggaa gcgggctata aaattattcc agttaatccc aaggctgctg gtgggactat
    10021 tttaggcgag ttggtctata gtagtctggc agagattgac caacctattg atattgtaga
    10081 tgttttccgc agaagtgaat ttttaccaga ggtagcacag gaatttatcc agtcgaacgc
    10141 caaagttttc tgggctcaac tcggtttaga aagtcaagaa gcagaaaaac tattgcgtca
    10201 ggcaggtcgt aacgatattg tcatgaataa atgtatcaag attgaatatc ttgaaatgaa
    10261 agaacaatat taatagaggc tgggcagaaa gtccatcctc g
//
LOCUS       DBNFCX010000080        10131 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.080, whole genome shotgun sequence.
ACCESSION   DBNFCX010000080 DBNFCX010000000
VERSION     DBNFCX010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 10131)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10131)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10131
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.080"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            83..1324
                     /gene="pbp3"
                     /locus_tag="AC1PJC_001754"
     CDS             83..1324
                     /gene="pbp3"
                     /locus_tag="AC1PJC_001754"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase PBP3"
                     /protein_id="HIP6620733.1"
                     /translation="MRKFLLTLTTVIALFFTSTPILAEDFSVAAKHAIAVEVSSGKIL
                     YEQDAETKASIASISKTLSIYLVYEALAKGEITLDTMVDISDYPYSLTSNTELSNVNL
                     DARSYSVRDLLNASLITSSNSAIIALAEKIAGSEAAFVDRMKAKVQEWGITDAKIVNV
                     SGLDNTDLGENIYPGSSPEDVNMFSALDVAIIARRLILDYPQVLDITSLNAYDFGGYT
                     YYSTNQMLSDGTHARGGVDGLKTGTSNSAGSSFLATTQQAGMRIITVVLNATDGLTSP
                     ENRFVATNDLMNYVYSNFSLVTLVKKGEAFEDSKINVFNGEKETSPVVAAADLTVVQR
                     NQTDNVPTATFTTDIKEIDAPLKAGTLVGKLQLKDQDLIGKGYISEQASVDMIIPSDM
                     KEASWPFSWWNQFVRYVNEKL"
     gene            complement(1591..3006)
                     /gene="sufB"
                     /locus_tag="AC1PJC_001755"
     CDS             complement(1591..3006)
                     /gene="sufB"
                     /locus_tag="AC1PJC_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016397186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HIP6620734.1"
                     /translation="MSEERIEPTPIDLGEYKFGFHDENVELVASTGKGLNEEVIREMS
                     RIKGEPEWMLEFRLKSYETFKKMPMQTWGADLSELDFEDIVYYQKPSDKPARSWDDVP
                     DKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEYDKHGIIFTDTDTALKEHP
                     ELFKKYFGKLVPPSDNKLAALNSAVWSGGTFIYVPKGVKLDIPLQTYFRINNEGTGQF
                     ERTLIIVDEGASVHYVEGCTAPTYSTASLHAAIVEIIAHEGAYMRYTTIQNWSDNVYN
                     LVTKRARAEKNATVEWIDGNLGAKTTMKYPAVYLEGEGARGTMLSIAFANKGQVQDTG
                     AKMIHNAPHTSSSIVSKSIARGGGEVNYRGQVTFAKNSAKSISHIECDTIIMDDISKS
                     DTIPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKEL
                     PMEYAVELNRLIAYEMEGSVG"
     gene            complement(3144..3584)
                     /gene="sufU"
                     /locus_tag="AC1PJC_001756"
     CDS             complement(3144..3584)
                     /gene="sufU"
                     /locus_tag="AC1PJC_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly sulfur transfer protein
                     SufU"
                     /protein_id="HIP6620735.1"
                     /translation="MALSRLDSLYMAVVSEHSKSPRHRGSLDGVEKLELHNPTCGDVI
                     ELSVKIEKDVITDIAFDGVGCTISTASASMMTEAVLGKEIKHIEELAEIFSQMVQGQE
                     DTRQKELGDASLLAGVAKFPQRIKCATLPWNALKKALERSESAD"
     gene            complement(3571..4794)
                     /locus_tag="AC1PJC_001757"
     CDS             complement(3571..4794)
                     /locus_tag="AC1PJC_001757"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0006534 - cysteine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HIP6620736.1"
                     /translation="MDLERIRKDFSILDQVVNDEPLVYLDNAATTQKPQQVLDVLADY
                     YQKDNANVHRGVHTLSERATARYEAARQKVADFIQAKSSKEILFTRGTTTSLNWVAQF
                     AKELLQPDQEVIISVQEHHSNIIPWQQACQQTGAKLRYVTLKDGELDMAHLRSLLSSK
                     TKFVSLAHVSNVLGGVVPIGEIAELVHQVGAYLVVDGAQSVPHMAVNVQELDVDFYAF
                     SGHKMLGPTGIGVLYGKEELLNLMSPVEFGGEMIDFVYEQSATWKELPWKFEAGTPNI
                     AGAIGLGVAVDYLTEIGMDAIQAHEAELVDYVFPKLQAIPGLSIYGSQDLSKRTGVIA
                     FNLDDLHPHDVATALDYEGVAVRAGHHCAQPLLRYLQVPATVRASFYIYNTKADCDKL
                     VEAIIKTKEFFNGPI"
     gene            complement(4798..6060)
                     /gene="sufD"
                     /locus_tag="AC1PJC_001758"
     CDS             complement(4798..6060)
                     /gene="sufD"
                     /locus_tag="AC1PJC_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012130766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HIP6620737.1"
                     /translation="MTKEKIQEFSALQAEPTWLTDLRLKAFDKIAELDLPVIERVKFH
                     RWNLGDGSLATNDEIGAVPDFTAIGDNPMLVQVGSQTVLEQLPVDLVEKGVVFTDFAS
                     AMDIIPDVIEKYLGAAVAYDEHKLAAYNTAYFNATAVLYVPDNVEIDQPVEALFYQDS
                     TSPVAFNKRVLIIAGKNAKLNYLERFESLGDGAVATSANIVVEVIALAGSQIKFAAID
                     RLGKHLDTYLNRRGYLGNDATIDWAIGLLNEGNVVADLDSELKGNGSHANLKVVGLSS
                     GRQVQGVDTRVTNYGHNSVGHILQHGVILESGTLTFNGIGHIVRGAKGADAQQESRVL
                     MLSDKARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDRATAERLVVRGF
                     LGAVITEIPVKEVRDQLIAVIEEKLTKR"
     gene            complement(6077..6850)
                     /gene="sufC"
                     /locus_tag="AC1PJC_001759"
     CDS             complement(6077..6850)
                     /gene="sufC"
                     /locus_tag="AC1PJC_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HIP6620738.1"
                     /translation="MSVLEIKDLHVEIEGKEILKGVNLTLKTGEIAAIMGPNGTGKST
                     LSAAIMGNPSYEVTQGEILFDGVNILELEVDERARMGLFLAMQYPSEIPGITNAEFLR
                     AAMNAGKEDEDKISVRDFITKLDEKMELLNMKEEMAERYLNEGFSGGEKKRNEILQLL
                     MLEPTFALLDEIDSGLDIDALKVVSKGINAMRGEGFGAMIITHYQRLLNYITPDVVHV
                     MMEGRVVLSGGPELAQRLEKEGYVQVAAELGIDYKEDDI"
     gene            complement(7330..8502)
                     /locus_tag="AC1PJC_001760"
     CDS             complement(7330..8502)
                     /locus_tag="AC1PJC_001760"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0070085 - glycosylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HIP6620739.1"
                     /translation="MIPFALKYIMVIITTMVISAIATPLVRFMSLRVGAVDNPNARRI
                     NKVPMPSAGGLAIFVAFTISVLWFLPGIVTRVNYHGTYLHYIWPLVLASSIIVLTGFI
                     DDVKELKPAPKMFGILAAATIIWIFTEFRFDSFKIPFGGPFLQFPVWLSFLLTVLWIV
                     SITNAVNLIDGLDGLVSGVSIISLTTMGIVSYFFLHDSNIFLTLTIFVLVAAIVGFLP
                     YNYNPAIIYLGDTGALFIGFMIGVLSLQGLKNSTAVAVVTPMIILGVPITDTVVAIIR
                     RKLSGQKIYEADKMHLHHRLLSLGLTHRGTVLVIYAISFLFSLTSLLLNVSSRIGGTL
                     LLVTMGLGIEILCELIGIFGINRTPLLNLLRFIGNSSYRQEKIAKYKKCCEEKKRK"
     gene            complement(8499..9221)
                     /gene="mecA"
                     /locus_tag="AC1PJC_001761"
     CDS             complement(8499..9221)
                     /gene="mecA"
                     /locus_tag="AC1PJC_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adaptor protein MecA"
                     /protein_id="HIP6620740.1"
                     /translation="MKVKQISDSTLKITIKLDDLEERGMELSDFLIPQEKTEEFFYTV
                     LDELDLPMTFRESGMLSFRVTPKPDRVDIFVTKSDLDQSLNFDEFTDLSELGDVASMT
                     PDEFFKSLEQTVREKSAPDATAVRHLEEVEQEEEADEEEQERYIYYILEFPTIEDLFT
                     FVGTVDYPVEESELYKMDGHYYLTVLINVENRSKQYPGYILSRMLEFTNDTKLTRPAL
                     QEHGTLMLPLAAIEELRKVPTV"
     gene            complement(9349..>10131)
                     /locus_tag="AC1PJC_001762"
     CDS             complement(9349..>10131)
                     /locus_tag="AC1PJC_001762"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000905329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HIP6620741.1"
                     /translation="EWLPVSSTGHLILVQEFVKLNQSKNFLEMFNIVIQLGAILAVMT
                     IYFKKLNPFQPGKTKRDIQLTWQLWAKVVIACIPSILIAVPLDNWFEAHFNFMVPIAI
                     ALIVYGIAFIWIENRNRGIEPQVTDLAKMSYKTALLIGCFQVLSIVPGTSRSGATILG
                     AIILGTSRSVAADFTFFLGIPTMFGYSGLKAVKYFLDGNSLNMEQVWILLVASVTAYL
                     VSLVVIRFLTDFVKKHDFTVFGYYRIILGAILLVYAFITFLF"
BASE COUNT         2874 a         2342 c         2089 g         2826 t
ORIGIN      
        1 ctcatttttt acatattttt tccaaatttt tctcacattt cttgtgatat aatagaataa
       61 agtaacagcc aaaggaatga ttatgcgtaa atttttacta acactcacta cagttattgc
      121 tctttttttc acttccacac ctattttggc agaagatttt tctgttgcag ccaagcatgc
      181 tatcgcagtt gaagtaagta gcggcaaaat cttgtatgag caagatgccg aaaccaaagc
      241 aagcatcgct tctatcagta agacattgag tatttacctg gtctacgaag cactggcaaa
      301 gggtgagatc actttagata ctatggtaga tatttctgat tatccctata gcctcacttc
      361 taatacagaa ttaagcaacg tcaaccttga tgcacggtcc tattcagtaa gagacctctt
      421 aaacgcttct ttaataacat catccaatag tgctattatt gctctggcag aaaaaatagc
      481 cggtagcgaa gctgcattcg tggatcgaat gaaagcaaaa gtccaagaat ggggaattac
      541 tgacgcaaag attgtcaatg tatccggact agacaatacc gacttgggtg aaaatattta
      601 tccaggttcc agtcctgaag atgtaaatat gttttcagcc ctagatgttg ctatcattgc
      661 aagacgatta atactcgatt atcctcaggt actcgacatt acctcactaa acgcctacga
      721 ttttggtggc tacacttact atagcaccaa ccaaatgcta agcgatggta ctcacgctcg
      781 tggaggggtt gacggcttaa aaacagggac ctcaaactca gcaggttcaa gttttcttgc
      841 aacaactcaa caagctggta tgcgcattat cacagtagta ttgaatgcca ctgatgggct
      901 gacctctcca gaaaatcgtt ttgtcgcgac aaatgatttg atgaactatg tttattctaa
      961 cttttcactt gttacgctag taaaaaaagg tgaagctttt gaagatagta aaataaatgt
     1021 tttcaatggt gaaaaagaaa caagtcctgt tgttgcggca gcagatttaa ctgttgttca
     1081 acgaaatcaa actgataatg tccccaccgc aactttcaca acggatatca aagaaattga
     1141 tgctcccctc aaagcaggga ccttggttgg caaactgcaa ctgaaagatc aagatctcat
     1201 tggaaaaggt tatatttccg agcaagctag tgtcgatatg attatcccta gcgatatgaa
     1261 agaagcatcc tggcctttct cttggtggaa tcaatttgtc cgctatgtca atgaaaaatt
     1321 ataaaaaaat agtatgtcga acgattttcg acatactatt tttttatcgc agagcgacat
     1381 ctgctgcacc ttatctccaa cctcggttgg agagagttcc tgcggaactc ctagctacat
     1441 atcgttttct tacagaaaac gacgagcgtg gaaggtatcg aatttttata agattacaaa
     1501 gaagagcgac tgccgtcgct ccctatttcc aacgtcggtt ggagattttt tgacttttag
     1561 caaactcatg tttgctaaat tgccaaaaat ctaaccaacc gacccctcca tctcataggc
     1621 aatcagtctg ttgagttcga ctgcgtattc cattgggagt tcttttgtga atggttcgac
     1681 aaagcccatg acaatcatct ctgtagcttc ggattcggat aggccacggc tcatgaggta
     1741 gtagagctgt tcttctgaga tttttgatac tttggcttcg tgttcgaggg ccacttgtga
     1801 gttgtggatt tcattaaatg gaatggtatc tgatttggaa atatcatcca tgataatcgt
     1861 gtcacactct atgtggctga tagacttggc tgagttttta gcaaaggtta cttgaccacg
     1921 gtagttgact tctccgccac cacgggcaat ggatttggac acgatagatg atgaggtgtg
     1981 cggggcgttg tgaatcatct tggcaccggt atcttggacc tgacccttgt tggcaaaggc
     2041 aatggacaac atggttccac gtgccccttc accttctagg taaaccgcag ggtatttcat
     2101 ggtcgtctta gcaccaaggt tgccgtcaat ccactcaact gtggcatttt tctcggcacg
     2161 ggcacgcttg gttaccaagt tataaacgtt gtcagaccag ttttgaatgg tcgtgtaacg
     2221 catataggca ccttcgtggg caatgatttc cacaatagca gcgtgaaggc tggccgttga
     2281 gtaagtcgga gcggtacagc cttctacgta gtgaacactt gctccttcat ccacgataat
     2341 gagggtgcgt tcaaactgac ctgttccttc gttgttgata cggaagtagg tttgaagcgg
     2401 aatatccaat ttaacgcctt ttggtacgta gatgaaggta ccacctgacc aaaccgctga
     2461 gttgagggca gccagtttat tgtctgacgg cggaacgagt tttccaaaat attttttgaa
     2521 aagctctggg tgttccttga gagccgtgtc ggtatccgta aagataatgc catgcttgtc
     2581 gtactcttct ttcatattgt ggtagaccac ttctgattcg tactgagcag aagctcctgc
     2641 caagtaagca cgctcggcct ctggaatacc gatgcgttca aaggtttcct tgattttgtc
     2701 tggtacatca tcccagctgc gtgctggttt atctgacggt ttttggtaat agacaatatc
     2761 ttcaaaatcc agttcagaca agtcagctcc ccaggtctgc atcggcattt tcttgaaggt
     2821 ttcataggat ttcaaccgga attccagcat ccattcaggc tcgcctttga tacgggacat
     2881 ttcacgaatg acttcttcgt tcaaaccctt acctgtcgaa gccaccagtt ccacgttttc
     2941 atcatggaaa ccgaatttgt attccccaag atcaatcggg gttggttcaa ttctttcttc
     3001 tgacataata taagatacta agcccaataa gtatgagatt ggcagtttcg ctcacttcaa
     3061 tgcttgctgg gcctgttcaa ttccaatcag aaactgaaca atcctttctg tatgattttc
     3121 attttttgtt tattcgatgg tgctcagtca gcactctcac ttcgttccag tgctttcttt
     3181 agggcattcc acggtaaagt agcacacttg atgcgttggg ggaatttggc aacacctgcg
     3241 aggagagagg cgtctcccag ttccttctgg cgtgtgtcct cttgcccttg taccatttgt
     3301 gagaagattt ctgctagttc ttcaatatgc ttaatttctt ttccaaggac tgcttcagtc
     3361 atcatagaag ctgatgcggt tgaaatggtg cacccaactc cgtcaaaagc aatatcggta
     3421 atcacatctt tttcaatctt gactgatagt tcaatcacat caccgcaggt tggattatgg
     3481 agttctaact tttccactcc gtccaaactt ccgcggtgac gaggcgactt ggagtgttca
     3541 gacacaactg ccatataaag agagtctaat ctagataggg ccattgaaaa actcctttgt
     3601 cttgatgatt gcctcgacca acttatcaca gtcagccttg gtattgtaga tataaaaact
     3661 tgctcgtaca gtagcaggca cctgcaaata tctgagaagc ggttgggcac aatggtggcc
     3721 agcccgcaca gcaacacctt catagtccag agcagttgcc acatcgtgtg gatgcaagtc
     3781 gtccaagtta aaggcaataa ctcccgtccg cttggacagg tcctgactac cataaatgct
     3841 caagcctgga atagcctgca attttggaaa gacatagtca actagttctg cctcgtgggc
     3901 ctggatagcg tccataccaa tttcggtcag gtaatcaacg gctactccca gaccaatcgc
     3961 acctgcaata ttgggcgttc cagcttcaaa cttccaaggc aattccttcc aagtagctga
     4021 ctgctcatag acaaagtcaa tcatttcacc gccgaattca actggcgaca tgagattgag
     4081 caattcttcc ttaccgtaga gaacgccaat tcctgtcggt cctaacattt tatgacctga
     4141 aaaggcatag aaatccacgt ctaattcttg cacgttgacg gccatgtggg gaactgactg
     4201 ggctccgtcc accaccaagt aggcaccgac ttgatgcacc agctctgcta tttccccaat
     4261 aggaaccacg ccacctagga cattggatac gtgggccaga gagacgaact tggtcttaga
     4321 agacagtagc gaccgcaggt gagccatgtc tagctcgccg tcttttaggg tcacatagcg
     4381 gagcttggca ccggtttgct gacaggcttg ctgccaagga atgatattgg agtggtgctc
     4441 ttggactgag attatcactt cctggtctgg ctggagaagt tcctttgcaa actgagctac
     4501 ccagttgaga ctagtggtcg tacctctggt gaagagaatt tccttgctag acttggcctg
     4561 gataaaatca gccaccttct gccgagccgc ctcatagcga gcagttgccc gttccgaaag
     4621 ggtgtgaacg ccacggtgga cattggcatt gtccttctgg taataatccg ccagcacatc
     4681 tagtacctgc tgcggttttt gagtggtcgc cgcattgtcc aaatagacca gcggctcatc
     4741 gttaacaact tggtctagga ttgaaaaatc cttgcgaatg cgttccaaat ccatatctta
     4801 tctctttgtt agtttttctt caatcacggc aatcagttgg tcacgaactt ccttaacagg
     4861 aatttctgta atgactgcac caaggaaacc acgaacaacc aagcgttcag cagttgctcg
     4921 gtccaagcca cgactcataa ggtagtacat gtcttctgga tccacctgac caatagaggc
     4981 tgcgtgtcca gctgtgacct cattctcatc gataaggaga attggattag catctgagcg
     5041 agccttgtca gacagcatga ggacacggct ttcctgctgg gcatccgcac ctttagcacc
     5101 acggacaatg tgtccgatgc cgttgaaggt caaggttccg ctttctaaga taaccccatg
     5161 ttgcaggatg tgaccgaccg aattatgacc gtagttggtc acgcgcgtat ccacaccttg
     5221 gacctgacga cctgatgaca gtccgacaac tttgaggttg gcatggctac catttccttt
     5281 taattcactg tccaaatcgg caaccacatt tccttcgttg agcagaccaa tcgcccagtc
     5341 aatcgttgca tcgtttccga gatagccgcg acggttgagg taggtatcca aatgcttgcc
     5401 aaggcggtca atggccgcaa acttgatttg gctaccagcg agggcaatta cttctacaac
     5461 aatattggct gaagtcgcta ctgctccatc acctagactt tcaaaacgtt ctagataatt
     5521 aagcttggca ttttttccag cgatgatgag aacacgtttg ttaaaggcaa ctggactggt
     5581 gctgtcttgg tagaaaagag cttcaaccgg ctggtcgatt tcaacattat ctggcacgta
     5641 gaggacagct gttgcgttaa aataggctgt gttgtaagcc gctaatttgt gctcatcata
     5701 ggctacggca gcgccgaggt atttttcaat gacatcagga atgatgtcca tagccgatgc
     5761 gaagtcagta aagactacac ctttctctac aaggtcaacc ggcaactgtt ctagaaccgt
     5821 ttggctgcca acttggacca acatcggatt gtcaccgata gctgtaaaat ctggaacagc
     5881 cccgatttca tcatttgtgg ctaggcttcc gtcaccaagg ttccaacggt gaaacttgac
     5941 ccgctcgata accggcaagt ccagctctgc tattttgtca aaagccttaa ggcgcaggtc
     6001 tgtcaaccaa gttggttctg cctgcaaggc tgaaaattct tgaatctttt ctttggtcat
     6061 agcttcctcc aaagacttaa atgtcatctt ctttatagtc gatgccaagc tctgctgcta
     6121 cttggacata tccttctttt tccaagcgtt gcgccaattc tggtccgcct gacagaacaa
     6181 cacggccttc catcatgaca tggacaacgt ctggtgtgat gtagttgagc aagcgttggt
     6241 agtgagtaat aatcatggca ccaaagcctt caccacgcat agcattgatc ccctttgaca
     6301 cgactttaag ggcatcaata tccaatcctg agtcaatctc atcaagaagg gcaaaagtcg
     6361 gttccaacat gagtaattgc agaatctcat tgcgtttttt ctcaccacct gagaaacctt
     6421 cgttgaggta gcgctctgcc atttcctctt tcatgttaag gagctccatc ttttcatcca
     6481 acttagtaat gaaatcacga acagaaatct tgtcttcgtc ttccttacca gcgttcattg
     6541 cagcacgaag aaattccgca ttagtaatcc ctggaatttc tgacgggtat tgcatagcca
     6601 agaagagtcc catacgggca cgttcatcga cttctaattc taaaatattg acaccgtcaa
     6661 acagaatctc accttgggta acttcataac ttggattgcc catgatggct gctgaaaggg
     6721 tggatttccc tgttccgttc ggtcccatga tggctgcaat ttcacctgtt ttaagggtca
     6781 aattcacacc ttttaggatt tccttgcctt cgatttcaac atgaaggtct ttgatttcta
     6841 atactgacat gctgtgctcc ttttcatttt tgtcctcttc aaaaaccaca ttaactgacc
     6901 aagctaacta gatacaccga taagactcaa ctttggcaat agggaaagaa ctcgaccatc
     6961 catagaagag ttcgttttcc cacccccgta cagttgatta ggtcagattt ggagtgtaaa
     7021 acacgaacaa atctgccaat caaccactgc gctgagatgt tgacactaac gttgagaagc
     7081 ggtacggggc ttgagcccag cctcactcca ctggactgtc aaactcaatc aaccactact
     7141 gcgctgagat gttgaggcta actttgagaa gcggtgcggg gcttgaaccc agcctctttt
     7201 cttgttaatg atgattttca gagagtgtta atctataaaa tagtcttttc tgacaatttt
     7261 aattaaccat atccactata ttatatcaaa aaaagagcct aacggctctt atcttgttta
     7321 gaaagattct tattttcttt ttttctcttc acagcacttt ttatactttg cgattttttc
     7381 ttgacggtaa ctactattac caataaaccg aagaagattg agcaatggag ttcgattaat
     7441 accaaagatg ccaatcaatt cacagagaat ctcaattccc agtcccatgg tcaccaatag
     7501 gagagtcccc cctattcgac tcgaaacatt gagcaagaga gaggttaggg agaataagaa
     7561 agagatggca taaatcacta atactgtgcc acgatgagta agtcccagag agagcaagcg
     7621 atgatgcaga tgcatcttat ccgcttcata gattttttgc ccagacaatt ttcgacgaat
     7681 gatggctact acagtatccg taataggcac tccaagaata atcatcggag taaccactgc
     7741 aacagctgtc gaatttttca gtccttgaag ggacaagact ccaatcataa acccgatgaa
     7801 gagggctccg gtatcgccaa gataaatgat ggcgggatta tagttataag gtaaaaatcc
     7861 aacaatcgcc gcaaccaaaa caaagatggt taaggtcaaa aaaatattgc tatcatgcaa
     7921 aaagaaataa gacacaattc ccatcgttgt cagggaaata atcgatactc ccgaaaccag
     7981 accatccaga ccatcaatca agttgactgc attcgtaatg gaaacaatcc aaaggaccgt
     8041 taatagaaaa gagagccaga caggaaattg aaggaaaggt cctccaaaag gaatcttaaa
     8101 gctatcaaaa cgaaattccg taaaaatcca aatgattgtc gctgcagcta gaataccaaa
     8161 cattttagga gcaggcttta gttccttgac atcatcaatg aatcccgtaa gaacgataat
     8221 gctggatgct aggaccaggg gccagatata atgcaagtaa gtgccatggt aattgacacg
     8281 ggtaacaatt cctggtaaaa accataggac agaaatggta aatgccacaa agatagccag
     8341 acctcccgct gaaggcatgg gtaccttatt tatccgccgt gcattgggat tatcgactgc
     8401 tccaaccctc agggacataa aacgaaccaa gggggtcgca atggctgata tgaccatggt
     8461 tgtaataatg accattatgt attttagagc aaaaggaatc atactgtcgg aaccttccta
     8521 agctcctcga ttgccgcaag cggaagcatc aaagttccgt gttcttgtaa agcaggtctg
     8581 gtcaacttag tatcattggt aaattccaac attcgtgaga gaatgtagcc tggatactgc
     8641 ttggaacgat tttctacatt gataagaacg gtcaagtagt agtgaccatc cattttatat
     8701 aattccgatt cttctactgg ataatcaacc gtaccaacaa aagtaaacag atcctctatc
     8761 gttggaaatt ccaaaatata gtaaatatag cgctcctgct cctcttcatc tgcttcttcc
     8821 tcttgctcta cctcttccaa atgacgaacg gctgttgcat ccggtgcgct tttctcacga
     8881 acggtttgct ccaaactctt gaaaaactca tctggagtca tacttgcgac atcaccaagt
     8941 tccgacaaat ctgtaaattc atcgaaattc aagctctgat ccaaatcaga tttggtaaca
     9001 aagatgtcca cccgatctgg cttcggagtc acacgaaaac tcagcatacc gctttctcgg
     9061 aaagtcattg gtaaatccaa ttcatccaaa acagtataga agaactcctc tgtcttttct
     9121 tgcggaatga gaaagtccga aagttccatt cctctctctt ccaaatcatc taattttata
     9181 gtgattttca aggttgaatc actaatttgc tttactttca taactacctc attcattgat
     9241 tcatcaattt cttaaaattg attgatcatt ttcaatactc atacatatct tccaccatta
     9301 tactaaaacc aagctcgaaa gacaaaagaa aagcaggtct ccctgctctt aaaataaaaa
     9361 tgtgataaag gcataaacca ataaaatcgc ccctaaaatg atgcggtagt aaccaaagac
     9421 cgtgaaatca tgttttttaa caaagtctgt caagaaacga ataacaacta aggataccaa
     9481 gtaagccgtc acactagcga ctagcaagat ccatacctgc tccatattca ggctattgcc
     9541 atctaagaaa tatttaacag ccttcaagcc actataacca aacatggttg gaatcccaag
     9601 gaagaaggta aaatctgctg ccacagatcg gctggtcccc aaaataatcg ctcccagaat
     9661 ggtcgcacct gagcgactag tccccggaac gatgcttaag acctggaaac acccaatcaa
     9721 caaggcagtt ttataagaca ttttcgctaa gtccgtcacc tgtggctcta tacctctgtt
     9781 acggttctca atccaaataa aggcaatacc gtagacaatc aaagcaatcg caatcggtac
     9841 cataaaattg aagtgcgctt caaaccaatt atccagcggg actgcaatta ggatggacgg
     9901 aatacaggca atgacaacct tggcccacaa ttgccaagtc aattgaatat cacgcttggt
     9961 ttttccaggc tgaaatggat tcaatttttt aaagtaaatg gtcataactg ctagaattgc
    10021 tcctagctga atgacaatat taaacatttc taggaagttc ttactttgat ttaatttcac
    10081 gaactcttga accaaaatta aatgccccgt tgaagaaact ggcaaccatt c
//
LOCUS       DBNFCX010000081        10096 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.081, whole genome shotgun sequence.
ACCESSION   DBNFCX010000081 DBNFCX010000000
VERSION     DBNFCX010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 10096)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10096)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10096
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.081"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..689)
                     /locus_tag="AC1PJC_001763"
     CDS             complement(<1..689)
                     /locus_tag="AC1PJC_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3307 domain-containing protein"
                     /protein_id="HIP6620742.1"
                     /translation="MSFSVISSYLIQHPVLTALLIAHFLSDFTFQSQALADAKKLHLK
                     ALFVHLFIVAIPLLILALLTPVQNGDLFFQVWLSHLAIDYVKYFLNKHHWIKDSWEAG
                     AFLADQLLHIISIIMLYHTIGVNVASHSLWIEPNYILLQILFILLISKPVNILFKLYF
                     SKYQIVEGEEEQTVTGAGALIGQLERLIMGIFLLLGQYTAIGLVFTAKSIARYDKISK
                     SQAFAEYYLIGS"
     gene            complement(693..1361)
                     /locus_tag="AC1PJC_001764"
     CDS             complement(693..1361)
                     /locus_tag="AC1PJC_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SatD family protein"
                     /protein_id="HIP6620743.1"
                     /translation="MNYIAIIGDIVNSKQTSNRSSIQERLKQQLNRINHSFAQDFASP
                     FTITKGDEFQALCKPNPYIFLIIDQIQLAFRDEVEIRFGIGLGEILTAIDPKLSIGAD
                     GPAYWEARKAIDFIHDNHDYGTSKIAFSSEYKQIDRVINPLLTSSDFIKAAWNRSQTD
                     LFETLISKKIYQEDFTQKPIAEKMKLSQSAFTKRLKSSGIKLYLRNRQTAMNLILQLS
                     QKEG"
     gene            complement(1555..3129)
                     /gene="ffh"
                     /locus_tag="AC1PJC_001765"
     CDS             complement(1555..3129)
                     /gene="ffh"
                     /locus_tag="AC1PJC_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000863601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HIP6620744.1"
                     /translation="MAFESLTERLQNVFKNLRRKGKISESDIQEATKEIRLALLEADV
                     ALPVVKDFIKKVRERAIGHEVIETLNPAQQIIKIVDEELTAVLGSETSEIIKSPKIPT
                     IIMMAGLQGAGKTTFTGKLANKLKQEENARPLLIAADIYRPAAIDQLRTLGQQIDVPV
                     FELGNQVPALEIVRQGLEQAKANHNDYVLIDTAGRLQIDQALMAELREIKEFAQPNEI
                     LLVVDAMSGQEAANVAREFNDQLAITGVILTKIDGDTRGGAALSVRHITGQPIKFTGT
                     GEKITDIETFHPDRMSSRILGMGDMLTLIEKASKEYDEKKSLELAEKMRENTFDFNDF
                     IDQLDQVQNMGPMEDLLKMIPGMAGNPALANLKVDEREIARKRAIVSSMTPAERENPD
                     LLTPSRRRRIANGSGNSFVEVNKFIKDFNQAKTMMQGVMSGDMNKMMKQMGINPNNLP
                     KNMPNMNGMDMSALEDMMGGAGMPDMSQLMGGAGMPDMSQMFGGGLKGRIGEFAMKQA
                     MKRQANKIKKAKKKRK"
     gene            complement(3142..3474)
                     /locus_tag="AC1PJC_001766"
     CDS             complement(3142..3474)
                     /locus_tag="AC1PJC_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding protein"
                     /protein_id="HIP6620745.1"
                     /translation="MEIEKTNRMNALFEFYAALLTDKQMNYIELYYADDYSLAEIAEE
                     FQVSRQAVYDNIKRTEKLLEDYEMKLHMYSDYVVRSQIFDEMLNKYPEDAYLKEKIAI
                     LTSIDNRE"
     gene            complement(3577..4275)
                     /locus_tag="AC1PJC_001767"
     CDS             complement(3577..4275)
                     /locus_tag="AC1PJC_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003076949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HIP6620746.1"
                     /translation="MKAAYITIHDKIKEQIDNGIWKIGQRLPSERDLADEFGVSRMTL
                     RQGITLLVEEGILQRKIGSGTYVASTRVQEKMRGTTSFTELVQLQGKTPSSKLLSYTR
                     TKPNEKEVEQLGLSRGEYVIRMERVRYADNVPVVYEVASIPERLIKNVPKEDVTNHFF
                     KTLMDNGYRIGTSKQTIFARLANEKVAQYLQISKNQAILALKQVSYLEDGQAFEFVNS
                     QYVGERFEFYLENS"
     gene            4551..6101
                     /gene="guaA"
                     /locus_tag="AC1PJC_001768"
     CDS             4551..6101
                     /gene="guaA"
                     /locus_tag="AC1PJC_001768"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HIP6620747.1"
                     /translation="MTKQDVQKIIVLDYGSQYNQLISRRIREFGVFSELKNHKITAEE
                     VRAINPIGIVLSGGPNSVYAENAFDIDPEIFELGIPILGICYGMQLITHKLGGKVVPA
                     GEAGNREYGQSNLQLKTESALFAGTPEEQLVLMSHGDAVTEIPVDFHLVGLSADCPYA
                     AIENTERRIYGIQFHPEVRHSVYGNDILKNFAFGICGAKGDWTMENFIETEIEKIRQT
                     VGDKKVLLGLSGGVDSSVVGVLLQRAIGDQLTCIFVDHGLLRKNEGDQVMEMLGGKFG
                     LNIIRVDAAKRFLDLLAGVSDPEKKRKIIGNEFVYVFDDEASKLTDVEFLAQGTLYTD
                     IIESGTDTAETIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTALGMPDEVVWRQ
                     PFPGPGLAIRVMGEITEEKLQTVRESDAILREEIAKAGLDRDVWQYFTVNTGVRSVGV
                     MGDGRTYDYTIAIRAITSVDGMTADFAKLPWDVLQKISVRIVNEVDHVNRIVYDITSK
                     PPATVEWE"
     gene            complement(6276..7325)
                     /gene="mcrC"
                     /locus_tag="AC1PJC_001769"
     CDS             complement(6276..7325)
                     /gene="mcrC"
                     /locus_tag="AC1PJC_001769"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methylcytosine-specific restriction
                     endonuclease system specificity protein McrC"
                     /protein_id="HIP6620748.1"
                     /translation="MIPVQNIYYMLSYAFKILHKQEYKRIATEEFKNAADLLAEIMII
                     SLSIQVKRGLGREYRSQTESLSALKGKINISESLTPPNWRRKQLVCQYDDFSLDSRMN
                     RIIKASIEILLKADISRDRKKKLRKLLVFFGEVSKINLHSINWNLQYNRNNQSYQLLM
                     SICYLVVNGLIHTEREGNKKLMNFLDERRESLLYEKFILGYYKKHYPQIQVTASQIPW
                     ALDDGFGEMLPIMQSDIYLKYKDTILIIDAKYYSSNTQIRFDKRTLHSNNLYQIFTYV
                     KNQAYRLSDTNDTVAGMLLYAKTDIDIQPNQVYQMHGNQISVKNLDLNLQFASIAEQL
                     DDIITSHFLSPPKRY"
     gene            complement(7322..9019)
                     /locus_tag="AC1PJC_001770"
     CDS             complement(7322..9019)
                     /locus_tag="AC1PJC_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HIP6620749.1"
                     /translation="MDEQNQFNWVNFYKEFAWKLVDYKDNRAELVEKVKAIYTKIKIH
                     MPTLEKDNQLIDIDPFTIFGLFNKQIKEENRIKILTAIAELFNLQTEIPSSFESIPVL
                     MNQNATFYYFIGDRDEKDIDDLWELFIAALTYSKEPTAEKKEKFSHYFDLAINKKGNG
                     NSKITMALYWIAPDFFLSLDSQNEAYVYESGEIPTDIVQKLPKMKSKISADDYFYISD
                     SMHHYLNSAESKLKNFKELSSMAWKYSKQINQEEKERSAGAISPLAEEADTGNEIGSE
                     EVVEDSYTKNHFLSEVYMTEEEYNQLTSILQMKKNIILQGAPGVGKTFVAERLAFSLM
                     GKPDLERVMTIQFHQSYSYEDFIMGFRPSTSGFELRRGAFYTFCKKAESDKSHDYFFI
                     IDEINRGNLSKIFGELFMLIENDKRGKSLQLLYSDEQFSIPENLYIIGMMNTADRSLA
                     LLDYALRRRFAFFDIKTGFSTTGFKDYQTNLKNEKFDRLISCVEKLNQAISTEEVLGD
                     SFCIGHSYFCGLSAEVLDQGLLEAIVEYELIPLLKEYWFDEPTKIHDWSSKLRSTIQ"
     gene            9215..10003
                     /locus_tag="AC1PJC_001771"
     CDS             9215..10003
                     /locus_tag="AC1PJC_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620750.1"
                     /translation="MAVLKYSKVLLLVLFIATGLSCIGIYWLGKEQNRLLNEQCHALN
                     IRIINDLGTKIDAIGGPQNPRIIGFFQQDDTTAISQRIGTASEEELKIAKPDNLFQKE
                     WIVLYPQTRSSPFENTSAYAVMKTSIKADWLHVTTSSETELDIFYEKADESLLTLEDL
                     VQDKESFRATLKTILVSAKNEAEIQVQKDILEMFESDDWSAIPFAYTEKSLILEKAVI
                     SISAFVDSLNPYYFSEQTLADLRLSEESRQALEDSVDKTIITYP"
BASE COUNT         2884 a         1979 c         1961 g         3272 t
ORIGIN      
        1 gaaccaatta aatagtattc agcaaaggct tggcttttgg atattttatc atagcgtgcg
       61 atggactttg ctgtaaatac cagtccgata gctgtgtatt gccccagaag cagaaaaatt
      121 cccattatga ggcgctccaa ctgaccaatc aaggctcctg cacctgtcac agtctgctct
      181 tcttctcctt ccactatctg atatttgcta aagtagagtt tgaaaagaat attgacgggc
      241 ttgctgatca gaaggataaa aaggatttgc agaaggatat aatttggttc aatccagagt
      301 gagtgtgaag cgacattaac accgatagtg tgataaagca tgatgattga gatgatatgt
      361 agcaattgat cagctaagaa tgctccagct tcccaggagt cctttatcca atggtgtttg
      421 ttgagaaaat atttgacata gtcaatcgca aggtggctca gccaaacttg aaaaaataaa
      481 tctccgtttt gaacgggggt aagtaaggct agaataagaa gagggatagc aacaatgaaa
      541 aggtgcacga aaagagcttt caaatgaagc tttttagcat ccgccagtgc ttgactttgg
      601 aaggtgaaat cacttaaaaa gtgggcaata agcaaggcgg ttaaaactgg atgttgaata
      661 agatagctag aaataactga aaatgacatg ctttatcctt ctttctgact gagctggaga
      721 atcaaattca tggcagtttg acgattacgc aggtagagtt tgattccgct ggatttcaaa
      781 cgtttggtaa aggcgctttg actgagtttc attttctcag caattggctt ttgtgtgaaa
      841 tcttcttgat agattttttt ggagattaag gtctcaaaca gatccgtttg cgaacgattc
      901 caggcagctt tgatgaaatc gctagaagtt agcaaggggt taatcacacg atcgatttgc
      961 ttgtattcag atgaaaatgc aattttgctg gtgccatagt catggttgtc atgaatgaag
     1021 tcaatagcct tgcgtgcttc ccaataagct ggaccatctg ctccaatact tagcttggga
     1081 tcgatagctg tcagaatctc acccaaacca attccaaatc gaatctccac ctcatcacga
     1141 aaggctagtt ggatttggtc aattattaaa aaaatataag ggttaggctt gcataaggct
     1201 tgaaattcat ctccctttgt aatggtaaat ggtgatgcga agtcctgagc gaaggaatga
     1261 ttgattctat tcagctgctg ttttagccgc tcttgaatac tagagcggtt ggaagtttgt
     1321 tttgaattga caatatctcc tattattgcg atatagttca taacttgtcc tctgattcct
     1381 attatatttc cattataacg gacaatataa agattgtcca ctaaaaagga cattttttaa
     1441 tatttccgtt ataacggaaa gtgttggggt tcaaaaatca tttttcctgc tttgctactt
     1501 ctattttacg ttgctgtatc ttacttcttc gaataaaaag taaaaaagaa gagattattt
     1561 tctcttcttt ttggctttct tgattttatt ggcttggcgt ttcatggctt gtttcatagc
     1621 aaactcaccg attctacctt tcaaaccgcc tccaaacatt tgggacatat ctggcatacc
     1681 agctcctccc atcagttggc tcatatcagg catgcctgca ccacccatca tatcttcaag
     1741 agcagacata tccataccgt tcatgtttgg catgttttta gggagattat ttgggttgat
     1801 tcccatttgt ttcatcattt tgttcatgtc gcctgacatg acaccctgca tcatggtttt
     1861 cgcttggttg aaatccttga taaatttatt gacttcgaca aagctatttc cagaaccgtt
     1921 agcaatacga cgacgacggc tcggtgtcaa caaatcagga ttttctcgtt cggctggtgt
     1981 catagaagat acgatagctc gttttcgtgc aatttcacgc tcgtcaactt tcaagttggc
     2041 aagggctggg ttaccagcca tacctggaat catcttcagc aggtcttcca ttggtcccat
     2101 attctgaact tggtccagct gatcaatgaa atcgttgaaa tcaaaggtat tttcacgcat
     2161 tttttcagcg agttccaatg atttcttctc gtcgtactct ttgctggctt tttcaatcag
     2221 ggtcaacatg tcacccatac ctaagatacg agaagacatt cggtctgggt ggaaggtttc
     2281 gatgtcggtg attttttcac cagtaccggt gaatttgatt ggctgaccag taatgtgacg
     2341 gacagacaag gctgcaccac cacgtgtatc gccgtcaatc ttggtcaaaa tcacaccagt
     2401 aatagccagt tgatcattga actcacgcgc aacgttggca gcttcctgac cactcatagc
     2461 atcgacgacc aagaggattt cgtttggctg agcaaactct ttgatttctc tcaattcggc
     2521 cataagggct tggtcaatct gcaaacgacc ggccgtatca atcagaacgt agtcattatg
     2581 attagctttg gcttgttcta aaccttggcg tacaatctcc agtgcaggga cttgattgcc
     2641 caactcgaat acaggtacat caatttgttg accaagggtc ctcaactggt caatggcagc
     2701 tggacggtaa atatcggcag caatcaagag tggacgggca ttttcttcct gcttgagttt
     2761 attagccaac ttacctgtga aggtcgtttt accagccccc tgcaatccag ccatcataat
     2821 gatagttgga atttttggtg atttgataat ttctgaagtt tcagaaccta atacagccgt
     2881 caattcttca tcaacgattt tgatgatttg ttgagcgggg ttcagggttt caatgacttc
     2941 atgaccgata gcacgttcac gtactttttt gatgaaatct tttacaactg gcaaggcaac
     3001 gtcggcttct agtaatgcca gacgaatttc cttggttgct tcctgaatat cactctcaga
     3061 aattttcccc ttacgacgca gatttttaaa aacattctgt aaacgttctg ttaagctttc
     3121 aaaagccata tacttctcct cttattctct attatcaata ctggttagaa tagcgatttt
     3181 ttccttcaaa taagcatctt ctggatactt attcagcatt tcatcgaaaa tctggctacg
     3241 cactacatag tcagaataca tatgtagttt catctcgtag tcttccagta atttttctgt
     3301 tcgtttaatg ttatcataga ccgcctgacg gctgacttga aattcttcag caatctcagc
     3361 caaactgtaa tcatcggcat aatagagctc gatgtagttc atttgcttgt ctgttagcaa
     3421 ggctgcatag aattcaaata aggcattcat tcggttggtt ttttcaattt ccataaactt
     3481 tattatatca aaaattccat attttataaa taagaaaatc cgtcatcact agaaagatta
     3541 cggattttaa aaatgtttta cataattatt tttatgttaa ctgttttcta aatagaattc
     3601 gaaacgttcc ccaacatact gactatttac aaattcaaat gcttgaccat cctcgagata
     3661 agatacctgt tttagtgcga gaatagcctg gtttttagaa atttgtaaat attgagccac
     3721 tttttcgttg gctaaacgcg caaaaatggt ttgtttgctc gttccaattc gataaccatt
     3781 gtccataagt gttttaaaga aatggttggt aacgtcttct ttggggacat tttttatcaa
     3841 gcgttcagga atgctggcaa cctcatacac gacgggaaca ttatctgcat agcggacccg
     3901 ctccattcga ataacatact cgccacggga taaacctaac tgttcaactt ctttttcatt
     3961 aggtttggtt cgtgtatagg acaataattt gctgcttggc gtctttcctt ggagttgtac
     4021 taattcagta aaggaagtcg tgcctcgcat cttttcttga acccgtgtac tggcgacata
     4081 agtaccggaa ccaatcttgc gttgtagaat accttcttcc actaaaagtg tgattccttg
     4141 acggagcgtc atacgagaaa caccaaattc atctgctaaa tcgcgttcac ttggtaaacg
     4201 ttgaccaatt ttccagattc cgttatcgat ttgttcctta attttatcgt gaattgtgat
     4261 atatgctgct ttcatttatc tagcctttct cttctttcta gtttaccaaa aataaaggcg
     4321 tttggctaat tcaggccaca ctctattggt aaaattctcc taggcaaaca atgaagtcag
     4381 attacctaaa ataaagtgag taaaaacaat aaaaatacga acactaatat ttttattatc
     4441 actcatagtt tgcaaaacag atatttaaca aataaaattt ggaaaatgtt cgcttttatg
     4501 ttaaaataac tactagtatt tgaatttttt tcaaaacgaa agggaaaaac atgacaaaac
     4561 aagatgtcca aaaaattatt gtattggatt atggtagcca gtacaaccaa cttatttcac
     4621 gtcgaattcg tgaatttggt gtcttttcag aattgaaaaa ccataaaatt acagctgagg
     4681 aagttcgtgc tatcaatcca attggtatcg ttctttcagg tggaccgaac tctgtctacg
     4741 cagaaaatgc ctttgatatt gatccagaaa tctttgaatt gggtattcct atcttaggga
     4801 tttgctatgg tatgcagtta attacccata aattgggagg taaggttgtt cctgctggtg
     4861 aggctggaaa tcgtgaatat ggtcaatcaa atcttcaact gaagactgaa tcagcgcttt
     4921 ttgctggaac accagaagaa cagcttgtac tcatgagcca cggtgatgca gtaactgaaa
     4981 ttcctgttga tttccacctg gttggtctgt ctgctgactg cccttacgct gccattgaaa
     5041 acacggaacg ccgtatctac ggtatccagt tccacccaga agttcgtcat tccgtatatg
     5101 gaaacgatat tttgaaaaac tttgcgtttg gtatctgtgg agccaaaggc gactggacaa
     5161 tggaaaactt catcgaaaca gaaattgaaa aaatccgcca gactgttggg gacaagaaag
     5221 tcttgctcgg tttatcaggc ggtgtggatt cgtctgttgt tggtgtgctt cttcaacgtg
     5281 ctattggtga ccaattgacc tgtatcttcg ttgaccacgg tcttcttcgt aagaatgaag
     5341 gcgatcaggt tatggaaatg ttgggcggta aatttggcct caatattatt cgcgtcgatg
     5401 ctgctaagcg tttcttagac ctacttgctg gcgtatctga ccctgagaag aaacgtaaaa
     5461 tcatcggtaa tgaatttgtt tacgtatttg acgatgaagc gagcaagttg actgatgttg
     5521 aattcctagc gcaaggaaca ctttataccg atattatcga gtcaggaacg gatactgctg
     5581 agacaatcaa atctcaccac aacgttggtg gtctgccaga agatatgcag ttcaagttga
     5641 ttgaaccgct caatactctc tttaaggatg aagttcgtgc tctcggtact gctcttggta
     5701 tgccggatga agttgtatgg cgccaaccat tcccaggacc aggccttgcc attcgtgtca
     5761 tgggtgaaat cactgaggaa aaacttcaaa ccgttcgcga atctgacgct atcttgcgtg
     5821 aggaaattgc aaaagcgggt cttgaccgcg atgtgtggca atatttcacg gttaatactg
     5881 gcgttcgctc cgtaggtgtt atgggagacg gtcgtaccta cgactacacc atcgccatcc
     5941 gtgctatcac ttctgtcgat ggaatgacag ctgactttgc caaactacca tgggatgttc
     6001 ttcaaaaaat ctctgtccgt atcgtaaacg aagtcgacca cgtcaaccgc atcgtctatg
     6061 atataacaag taaaccacca gcaacagttg agtgggagta aattagtcca gtggactaat
     6121 ttacccgacg cctaaaaaca aaaaagcgtc gctgatctgg gaaatcaatt aaccagacgc
     6181 tccaaaatag gaaagagtct tataaaaaaa caatcaaaga gtagtttagt gctactactt
     6241 tgattgtttt tttgttttct agcttaaaac tctaactagt accgttttgg aggggataga
     6301 aaatgcgatg taatgatgtc atccagttgt tcagcaatac ttgcaaactg caggtttaag
     6361 tccaaatttt tgacactaat ctggtttcca tgcatttggt agacctggtt aggttgaata
     6421 tctatatcgg ttttagcgta tagaagcatt cctgctactg tatcgtttgt atctgacagg
     6481 cgataagcct gatttttcac ataggtaaaa atttggtata gattatttga atggagtgtg
     6541 cgcttatcaa agcgaatctg tgtgttacta gaataatatt tagcatcaat aatcaatata
     6601 gtatctttat atttgaggta aatatcactt tgcatgatgg ggagcatttc tccaaaacca
     6661 tcatctagtg cccaaggtat ctgagaggcg gtaacctgta tttggggata atgcttttta
     6721 taatatccaa gaatgaactt ctcatatagc aaggattccc tccgctcatc aagaaaattc
     6781 atcaatttct tattcccctc cctctctgta tgaattaatc cattcaccac caaatagcag
     6841 attgacatta gtaattgata cgactgattg tttcgattat attgtaaatt ccaattgatt
     6901 gagtgcagat taattttcga gacttctcca aagaaaacta agagttttct caatttcttt
     6961 ttcctgtccc tgcttatatc agcttttagc agtatctcaa tgcttgcttt gataatgcga
     7021 ttcattctac tgtcaagaga aaaatcatcg tattggcaaa caagttgctt tctacgccaa
     7081 ttcggaggtg ttaaagattc agagatattt attttacctt taagagccga gagtgactcg
     7141 gtttgagaac gatactctcg accaagtcct cttttcacct gtatcgagag gctgattatc
     7201 attatttccg ccagtagatc tgcagcattt ttaaattctt cagtagcgat ccgcttatat
     7261 tcctgcttat gaaggatttt gaatgcgtag gatagcatat agtagatatt ttggacaggt
     7321 atcactggat ggtactcctt aacttactac tccaatcatg aatttttgtc ggttcatcaa
     7381 accaatattc tttcaagaga ggaatcagtt catattcaac aatggcttct agcaaacctt
     7441 ggtccagtac ttctgccgat aaaccgcaga agtaactatg cccaatacag aagctatctc
     7501 ccaatacttc ctctgttgaa atggcctgat ttagcttttc tacacaggaa atgagtctat
     7561 cgaatttttc gtttttcaga tttgtttgat aatctttgaa tcccgtagtt gaaaaacctg
     7621 tcttgatgtc aaagaaggca aagcgtcgtc tcagtgcata atcaagtagg gccaaactcc
     7681 tatctgcggt attcatcatg ccgatgatat atagattttc tggaattgag aattgctcat
     7741 ccgagtagag gagctgtaaa gacttgcctc gtttgtcatt ttctatcagc ataaacaatt
     7801 caccaaaaat tttgctcaaa tttcccctgt ttatttcatc aataataaag aaataatcat
     7861 gactcttgtc agactctgct tttttgcaga aagtatagaa tgcccctctt ctcagctcaa
     7921 agccacttgt cgaaggtcta aagcccatga tgaagtcctc gtaggaatag ctttggtgaa
     7981 actgaattgt catgaccctt tctaaatctg gtttacccat taatgaaaat gctaggcgtt
     8041 ctgcaacaaa cgtctttcca actcctggcg ctccttgtaa gatgatattc tttttcattt
     8101 ggagtatgga ggttaattga ttatactctt cttctgtcat atagacttct gataggaagt
     8161 gatttttcgt atagctatct tctactacct cttcactacc tatctcgttt ccagtatcag
     8221 cttcctcagc cagtggagaa attgcgccag cacttctttc cttctcttct tgattgatct
     8281 gtttagagta tttccaagcc atggatgata attctttaaa atttttcagt ttgctctctg
     8341 cactgtttaa ataatgatgc atagagtccg atatataaaa ataatcatcg gcagaaattt
     8401 ttgacttcat ctttggtaat ttttggacaa tgtcagttgg aatctcccca gactcataca
     8461 catacgcttc attttgacta tctaagctca agaaaaagtc gggagcaatc caatacaagg
     8521 ccatcgtaat cttgctgttg ccatttcctt tcttgtttat agccaaatca aaatagtgtg
     8581 aaaatttttc tttcttctca gccgtaggct ccttgctata ggtcaaagca gcaatgaaaa
     8641 gttcccataa gtcatcaata tctttctcat cacgatctcc gataaagtaa tagaaagtcg
     8701 cattctgatt catcagtact ggtatgcttt caaaagagga tgggatttcc gtttggaggt
     8761 tgaataattc tgctatagct gtcagaattt taatgcgatt ctcctctttt atttgcttat
     8821 tgaagagtcc aaatatcgta aaaggatcaa tatctatcag ttgattgtcc ttttctaatg
     8881 tgggcatatg tatctttatt ttggtataga tagcttttac tttctcaacc agctctgctc
     8941 tattatcttt atagtctacc aatttccaag caaattcctt ataaaagttt acccaattga
     9001 attgattttg ttcatccata gtatcctcca acggtgttgt atctacacct attaaattat
     9061 gagttcgaat ttacctatat tttatcatta aacattcctg tcgtaaactt agaatttata
     9121 tacttgtgta accgtttaat gtggtacctt aaaatagttg cttttgatat ttttatatga
     9181 taatatgtga ctgaaaacgt tttagaaagg tgtgatggct gtgctgaaat actcgaaagt
     9241 gctgttactt gtcttgttta ttgctactgg tctatcttgt atcggaatct actggctcgg
     9301 aaaagagcaa aatagactat taaatgagca gtgtcatgcc ttgaacatac gcattattaa
     9361 tgatctggga acaaaaattg atgccattgg cggtccgcaa aatccgcgta tcattggatt
     9421 ctttcagcaa gatgacacta ctgctatcag ccagcggatt ggtacagctt ctgaggagga
     9481 attgaaaata gctaaacctg acaatctatt ccagaaagag tggattgttc tctatcctca
     9541 aacgcgcagc agtccctttg aaaatacttc tgcctatgca gtaatgaaaa ccagtatcaa
     9601 ggctgactgg ctccatgtga ctacttcgtc agagacggaa ttagatattt tttatgagaa
     9661 ggcagatgaa agcttgttga ccttggaaga cttggtgcaa gacaaggaaa gttttcgtgc
     9721 tacactaaaa acaatcctag tttcagctaa aaatgaggct gaaattcaag ttcaaaaaga
     9781 tattttagaa atgttcgaga gtgatgattg gtctgctatt ccctttgctt acactgaaaa
     9841 atctctgata ttggagaaag ctgtcatttc aatttctgca tttgtagata gtctaaatcc
     9901 ctactatttt tcagaacaaa cccttgcaga tttgcgttta tcagaagaat cgcgccaggc
     9961 tttagaagat tcggtagata agacaatcat cacctatcct tgaataaacg gtgggagtgg
    10021 gaaagtcgtc atggatgtct ttcccagctt ctttatattt ttgtttaaca aattaaacat
    10081 ttttgtggat ttgaaa
//
LOCUS       DBNFCX010000082         9770 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.082, whole genome shotgun sequence.
ACCESSION   DBNFCX010000082 DBNFCX010000000
VERSION     DBNFCX010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 9770)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9770)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9770
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.082"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..281)
                     /locus_tag="AC1PJC_001772"
     CDS             complement(<1..281)
                     /locus_tag="AC1PJC_001772"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620751.1"
                     /translation="MIQITVDEQFEHAAKVYCKKIYDSFSKIEKEKLNLWVKDYLLLF
                     QKDYFEDGNNRNSYDYFFQIMIAPYEDLLAMKKYIDSRYVRIKYNKKKY"
     gene            complement(374..1198)
                     /locus_tag="AC1PJC_001773"
     CDS             complement(374..1198)
                     /locus_tag="AC1PJC_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620752.1"
                     /translation="MNKQQKNLNAISSLQRMLTKENKAYMRKLHGYMILASAFHEQEK
                     RATELLLSIHQDVLDAQTDGQSAEEFLGKDSKQMADELLSDLPPIRWYYGLRLTGLIS
                     LVYISWFFLGLFGVTGEMVLEWRGLLCDLLLALILPSSAFFILKNLVYERLKIKSYLL
                     MGTWGLSFVGLVGLRFWISRQFYEGIPLPLWASLLVILGVAAGLFYYRSKSAIVDTLI
                     LAYVLTVLSGFSQVTASQFGYGPRDWTGWLPLIFMFLALITTLVGTFFILKKEVVR"
     gene            complement(1200..1994)
                     /locus_tag="AC1PJC_001774"
     CDS             complement(1200..1994)
                     /locus_tag="AC1PJC_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620753.1"
                     /translation="MSRQMEYRKQIEMIESQLTKENKEYMGRINGYMMIASVFHRQEE
                     AVTAQLLSIYQDVLEAQKDGQSAEDFLGKDSKQMADDLLSYLPPIGFMEVANLSGLML
                     IIYLGSQWLMDFAGTGTISLNWLGLICDAVLSLLLPAGIFLIIRGLIYQTSKIKVWAS
                     FLCIPLLFLLICGLRLWAIPKEPDLVLTGWGLLVPLTLLGLALLFFQKEKLVRYVFLP
                     TYLFMIVGGVVNMVMAVPVWFNLMLVILPAMVFGIGTAVLLVRKER"
     gene            complement(1996..2313)
                     /locus_tag="AC1PJC_001775"
     CDS             complement(1996..2313)
                     /locus_tag="AC1PJC_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HIP6620754.1"
                     /translation="MKETQMLKGVLDGCVLQVIARQEIYGYELVQELRKLGFENMVGG
                     TVYPLLQKLEKNSLIFSQNKPSPDGPDRKYFYLTDQGKAYLEDFWSQWTELVQKVQRL
                     KGE"
     gene            complement(2310..2474)
                     /locus_tag="AC1PJC_001776"
     CDS             complement(2310..2474)
                     /locus_tag="AC1PJC_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620755.1"
                     /translation="MKLDKKSRENWKLAGITLVTAVITGWALDSILILGILLVSGLLF
                     GFFTDDEEGL"
     gene            complement(2662..4674)
                     /locus_tag="AC1PJC_001777"
     CDS             complement(2662..4674)
                     /locus_tag="AC1PJC_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIP6620756.1"
                     /translation="MFGLTVRLALTNLKKNRRLYFPYALMTIVSTAIAYIFASLAFHP
                     DLGQVKGADGVTMVLGFGMIVVMLAVAIMVFYANSFVMKQRSKEFGVYSILGLEKKHL
                     LLMTFLENLVFAASSILTGLLLGLALDKLFYALLLKAMQMPVLLASTFQLKSLVTVLI
                     YLFGIFALVSLFNIGKLGLTDSLKLVQGKKRGDKKTGFLWLQTLLALILLGAGYAIAQ
                     LVTSPLKAIPSFFGATLLVIFGTYLLFHAGVISLLNWLKQRQTYYYKPENFISVSNLI
                     FRMRKNALGLATITILSSMFLVTMVGGLNIYIGGKDYIANQNPNDYSIDVGMQPTASK
                     DQTEKWEEWAEAILEETDIPVESKVVYPYQQAYFSEVTNQQIKFLTDEEAAGMDFSDR
                     IGIGLIIDQGTYEKMTGEKLQLASDQVAIYSKGVQYQAGQTFTFDEMEMEVVQVLPKN
                     VTLGHLPDHGSFLLSQYLVIVVQDLTVFEKQTRSRYYMGFESSLSEEEQVDRYEVYVS
                     NRFENELWSSSMLPDVAYPIGISYRAYAMRGFFSFAGSLFFIGLLLSLIFLMAVVLVI
                     YFKQISEGYEDRDRFVIMTKVGLDEDQTRQSIRKQLLTVFFLPILLAFVHLAFAYKML
                     SSILLSIGVVNAGLLLQVTVGICGGYLLLYLVVYAITTRSYKQIIS"
     gene            complement(4676..5434)
                     /locus_tag="AC1PJC_001778"
     CDS             complement(4676..5434)
                     /locus_tag="AC1PJC_001778"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6620757.1"
                     /translation="MSVLDVQHVQKIYSSRFKAGQVEALKDIHFTVEKGEYVAIMGES
                     GSGKSTLLNILATLDKPTQGKVLLNGLDTQSIKSKEAAAFRREKLGFVFQDFNLLDTL
                     SVKDNVLLPLVLSRYPIDEMNKRLIHTLNSLGIATLQDKMPYEISGGQQQRVAVARAI
                     ITRPEILLADEPTGALDSKSTATLLDIFEKINQEGQTILMVTHSTAAASRAKRVLFIK
                     DGILYNQIYRGERTSQEMYQLISDTLTVMANRGE"
     gene            complement(5530..6510)
                     /locus_tag="AC1PJC_001779"
     CDS             complement(5530..6510)
                     /locus_tag="AC1PJC_001779"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HIP6620758.1"
                     /translation="MNKEMLSDFLTSWLRHRWLFLVSYCLFATTILAYSGLFDIERNL
                     VFYALTLLTICWLLALLWDFVREFSRFGKIWRGQKVTTGTASERLLQEKVERLEVQNK
                     LLIEKQRQEQTELDDYYTLWAHQMKTPIAASQLLVKEVDSSPVRHQLESELFKIEQYT
                     GLVLNYLRLQSFHDDLVIESVNLEELVRSLVKKYSLFFIQANTSLDLGQLDRTVKTDK
                     RWLGLLIEQILSNALKYCQGGSVSIVLDGDDLVIRDTGIGIAESDLERVFERGFSGFN
                     GRRTQQSSGLGLYLSRKIAAELGYSLKLQSKVGQGTEVRIGIKEVELIFD"
     gene            complement(6503..7186)
                     /locus_tag="AC1PJC_001780"
     CDS             complement(6503..7186)
                     /locus_tag="AC1PJC_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HIP6620759.1"
                     /translation="MQRILLVEDDKTISQLVAKNLINWGYQVQEVKDFQMVLEQMEEF
                     QPHLILLDIGLPFFNGYYWCQEIRKTSRVPIMFLSSHDQPMDIVMAINMGADDYVTKP
                     FDMTVFLAKIQGLLRRTYDFVGEQSLLWFEEISLDLKTMQVSYGQVVEELTRNEFQIL
                     RVLFEHGKEVVSREELMRELWNSDIFVDDNTLSVNIARLRKKLAELDLPDVIATKKGV
                     GYGLVWTHE"
     gene            7322..8491
                     /locus_tag="AC1PJC_001781"
     CDS             7322..8491
                     /locus_tag="AC1PJC_001781"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2974 domain-containing protein"
                     /protein_id="HIP6620760.1"
                     /translation="MPNLLNYIEDTQYDSFYDQPLNKLDILALTELSYLPFDRLVPAS
                     FTETGIRLDHLAEQFEATYQNDFPPFSMVTKNRLALFALLAKSIRFKSIKAFGFVDDY
                     QLDQEQQFSAISYRLDRRTILTAFRGTDDTIIGWKEDFHMTYMDEIPAQRSASGYLEK
                     LMSSQDGNFYIAGHSKGGNLALYAASQQVPELQEHILAIYPFDSPGLHKKHLDAPGYK
                     NIQDRIHPIIPQNSIVGMMLETPKNAQIVQSNTVGLLQHISFSWEIEGNDFKSAPTLT
                     NDSLQTDQTLKAWTASLTDEELKDFFDLFFGIFIQAGIERFSDITVNPLQKLQEMDRL
                     RKEFSPQEAEMMDKLIRLLFDTRYQIWRDNIPSPEISLPDWRKLFQRNTTENKEN"
     gene            complement(8506..9630)
                     /locus_tag="AC1PJC_001782"
     CDS             complement(8506..9630)
                     /locus_tag="AC1PJC_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase"
                     /protein_id="HIP6620761.1"
                     /translation="MKLPRFGVEEWLNVHENSAIYDIAGVSISSLTLEELFALSGTNP
                     EDFYKKLQSTKLNYGWIEGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYGLIE
                     PGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEGNGWLPDLEKLRQLIRPNTRMICIN
                     NANNPTGAVMDRAYLEELAEIASEVGAYILSDEVYRSFSGLDVPSIIEVYDKGIAVNS
                     LSKTYSLPGIRVGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQLALASRQEILKRN
                     RRILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDMPMEDFCLQLLQEYGVLLV
                     PGNRFDRDGYVRLGYACEKETLIKGLEKLSQFLRRFDNKN"
BASE COUNT         2900 a         2346 c         1881 g         2643 t
ORIGIN      
        1 ttatattttt tcttattata cttgattctg acatatcttg aatcaatata ttttttcatc
       61 gctaataaat cttcatatgg agcaatcatt atttgaaaaa aatagtcata actgtttcta
      121 ttgtttccat cttcaaaata atccttttga aatagcaata gataatcttt tacccaaaga
      181 tttaattttt ctttttcaat ctttgaaaag ctatcatata tttttttaca atacactttg
      241 gctgcatgtt caaattgttc gtctactgta atttgtatca tcttaagtct ctccgtttaa
      301 atatctacat tgtactgtca ttaaaactat tggtactatt gcaaaaaata gttccaaact
      361 taatgtatga tttttatctc accacttctt ttttcaaaat gaaaaatgta ccgacaagtg
      421 tagtgattag ggcaagaaac ataaaaatca agggcaacca acctgtccag tctctcggtc
      481 cgtagccaaa ctgactcgca gtcacctgac taaagccgct gagcaccgtt agcacatagg
      541 ctagaatcaa ggtatctaca attgctgact tactgcgata gtagaagaga ccagctgcga
      601 ctcctagaat caccaaaaga ctggcccaca agggcagggg aataccttca taaaactgac
      661 ggctaatcca aaaacgcagt ccaactagcc ccacaaaact aagcccccaa gtccccatca
      721 gcaaatagga cttgattttt aaccgttcat agactaggtt ctttaggatg aaaaatgcag
      781 agctgggtag aatgagcgcc agaagcaaat cgcacagcaa gccccgccat tctaggacca
      841 tctcaccagt cactccaaac aaacctaaga aaaaccagct aatatagacc aaggaaatca
      901 atcctgttaa tcgcaaacca tagtaccagc gaatgggcgg taggtcagac aagagttcat
      961 ccgccatctg cttgctatct tttcctaaaa attcctcagc ggattgaccg tctgtttggg
     1021 catccaagac atcttggtga atagaaagca atagttctgt cgcccttttc tcctgctcat
     1081 gaaaggccga agccaatatc atatatccat gaagtttacg catgtaggcc ttgttttcct
     1141 tggtcaacat cctctgtaag ctgctaatag cattcaaatt tttctgttgc ttgttcatct
     1201 tacctctcct ttctcaccaa caaaactgca gttccaatcc caaagaccat agctggaaga
     1261 atcaccaaca tcagattgaa ccaaactgga acagccatga ccatatttac cacaccgcca
     1321 acaatcataa agagataggt cggtaaaaag acatagcgga ctaatttttc cttttggaaa
     1381 aatagcagag cgagaccgag caaggtgagt ggtactagaa gcccccagcc agtcaagact
     1441 aagtcaggtt ccttggggat tgcccagaga cgaagtccgc aaatcaggag aaaaagaagg
     1501 gggatgcaga gaaagcttgc ccaaaccttg attttgctgg tctggtaaat gagaccgcga
     1561 atgatgagga aaatccctgc tggtagaagg aggctgagga ccgcgtcgca gatcaaaccc
     1621 agccagttga gcgaaatggt gcctgtccct gcaaaatcca tcagccattg gctgccgagg
     1681 taaatgatga gcatgaggcc actcaggttt gcgacttcca tgaaaccaat cggagggagg
     1741 tagctgagta ggtcgtctgc catttgcttg ctgtctttgc ccagaaaatc ctccgccgac
     1801 tgaccgtctt tttgggcttc cagaacatct tggtaaatgg ataaaagctg ggcagtcact
     1861 gcttcttcct gcctgtgaaa gacagaggca atcatcatgt agccattgat acggcccatg
     1921 tattccttgt tttccttggt cagctggctt tcaatcattt caatctgctt gcggtattcc
     1981 atttgtctgc tcatcttatt ctcctttcaa tcgctgaacc ttttgaacca attccgtcca
     2041 ctggctccaa aaatcttcta gataagcctt tccctggtct gtaagataga aatacttcct
     2101 gtctggtccg tctggcgagg gcttgttctg actaaaaatc aggctatttt tctctaactt
     2161 ctgaaggagg ggatagactg tccctccgac catgttttca aagcccagct tcctcagctc
     2221 ttggaccaac tcataaccat agatttcctg tcgggcaatg acctgcaaga cacagccatc
     2281 taggaccccc ttgagcattt gggtttcttt cataagccct cctcatcatc tgtaaaaaat
     2341 ccaaacagta agcctgatac taacaggatg cctaagatca aaatagaatc caaagcccag
     2401 ccagttataa cggccgtcac aagcgtgatg cctgctagtt tccaattttc ccgacttttc
     2461 ttatccagtt tcatactgcc tccccatcta gtttgtaata ccaactagtc taataaaaat
     2521 aaaagtgatt ttctttgtcc tctatcacta gtttgtttta cctattagct ttgtatctat
     2581 agtataacac aaggtggcta gtatgtaaaa taaaatagtg aaaactattc aaaaaataaa
     2641 aaaacttggg ttgccccaag tttaggaaat aatctgtttg taagaccgtg tcgtgatggc
     2701 atagaccact aggtagagga ggagatagcc accacagatg cctactgtca cctgtaacaa
     2761 aagccctgca ttaaccacgc cgatagataa aagaatggat gataacatct tgtaggcaaa
     2821 ggcaagatgg acaaaggcaa gtaggatagg taggaaaaag acggtcagca attgcttgcg
     2881 aatggactgt ctcgtctgat cctcatccag accaacctta gtcataatga cgaagcgatc
     2941 tctgtcttca tagccttctg aaatctgttt gaagtaaatc accagcacca ccgccatcaa
     3001 aaagatgagt gatagcaaga ggccgatgaa gaaaagtgaa cctgcaaaac tgaagaaacc
     3061 acgcatcgca taggcacgat aggagatacc aatcggataa gccacgtctg gtaacatact
     3121 tgaactccat agttcgtttt caaatctatt cgatacgtat acctcatagc gatcaacctg
     3181 ctcttcttcc gacagactac tttcaaagcc catataatag cgactcctag tttgcttttc
     3241 aaaaacagtt aagtcctgca ccacaatgac caagtactga cttagaagga aggacccatg
     3301 gtctggcaga tgtcctaaag tcacattctt gggcaagact tggacaactt ccatctccat
     3361 ttcatcaaag gtgaaggttt gaccagcttg atactggact cccttactat aaatggctac
     3421 ttgatcactt gccaactgga gtttttctcc agtcatcttt tcataggtgc cttgatcaat
     3481 gattaaaccg atacctatgc ggtcagagaa atccatacca gcggcttctt catccgtcaa
     3541 aaattttatt tgctgatttg tcacctcaga aaaataggct tgctgataag gatagactac
     3601 cttactttca actggaatat ctgtctcttc caagatagct tccgcccact cctcccactt
     3661 ctccgtttga tcttttgaag cggttggctg cattccaaca tcaatcgaat aatcatttgg
     3721 attttgattg gcaatataat ctttgccacc gatgtaaata ttgagtcctc caaccatggt
     3781 caccaaaaac atacttgaga ggatggtaat ggtcgcaagg cccagagcat ttttccgcat
     3841 acggaaaatc aagttagaca cagaaataaa attctcaggc ttgtagtaat aggtctgacg
     3901 ctgttttagc cagtttaaga gactgataac acctgcatgg aagagcaggt aggtcccaaa
     3961 tataaccaga agagtcgctc caaagaaact tggaatagct ttcagcggac tggtcaccag
     4021 ttgggcaatg gcgtagcctg cccccaataa gataagggct aagagggttt gtagccagag
     4081 gaagcccgtt ttcttatccc ctctcttctt accttgaacc agtttgagag agtcggtcaa
     4141 gcccagtttt ccaatattaa agaggctgac caaggcaaaa atcccaaaga gatagataag
     4201 tacagtaacc agacttttca actggaaggt tgaagccaag agcacaggca tctgcatggc
     4261 tttcagcaag agggcgtaga agagtttatc tagagccaag cccagcaaca agcctgtcaa
     4321 aatactactg gctgcaaaaa ctagattttc tagaaaagtc atcaggagga ggtgtttttt
     4381 ctccagacca agaatgctat agacaccgaa ctcttttgac cgttgcttca tgacaaaact
     4441 attggcatag aagaccatga tggcaaccgc caacatgacc acaatcatac cgaagcccaa
     4501 taccatggtt accccatcgg ctcccttgac ctgacctaaa tcaggatgaa aggcaagcga
     4561 tgcaaatata taggcaatgg ctgttgaaac tatagtcatt agggcatagg gaaaatagag
     4621 cctgcggttc tttttgagat tggtcagagc caatcgaaca gttagtccaa acatactact
     4681 cacctcgatt cgccatgact gtcaatgtat ctgaaatcaa ctgatacatt tcctgactag
     4741 ttcgctcacc acggtagatt tgattgtaga ggataccatc cttgatgaag aggacccgtt
     4801 tggcacgact ggccgctgca gttgagtggg tcaccatcaa aatggtttgc ccctcttgat
     4861 tgattttttc aaaaatatct aaaagggttg ccgttgattt ggagtcgagg gccccagttg
     4921 gctcatctgc caaaagaatt tcaggtcgtg tgataatggc acgcgccacc gcaacccgtt
     4981 gctgctgacc acccgaaatc tcgtagggca tcttgtcttg caaggtcgca attcccaggc
     5041 tattaagcgt atgaatgagt cgcttgttca tctcatcaat cggatagcga gacaaaacca
     5101 gaggcaagag cacattgtcc ttgacagaga gggtgtctaa gagattaaaa tcttggaaga
     5161 caaagcccaa tttctcccga cgaaaggctg ccgcttcctt gctcttgata gactgggtat
     5221 ccaatccgtt aagcaagacc ttgccctgcg ttggcttatc aagggttgcc aaaatattga
     5281 gcaaggtgga cttaccagaa cccgactcac ccataatggc gacatattca cccttttcca
     5341 ctgtaaaatg aatatccttc aaagcctcaa cctgacccgc cttaaagcga gaactgtata
     5401 tcttttgaac gtgttgaaca tctaaaactg acataacttg actccttttc tttttctacc
     5461 ttcattctac acggtcccaa gataaactac catagcctta gctttcattt acgtgacagt
     5521 tttgtaagat tagtcaaaaa tcaactccac ttctttgata ccgattcgca cttctgttcc
     5581 ctgacctact tttgattgta gctttaggga atagcccagc tccgcagcaa ttttccgtga
     5641 gagatagagc cccagacccg aagattgctg ggttctgcgg ccattgaaac ctgagaaacc
     5701 acgctcaaag acccgttcca agtcactctc tgcaatccca attcccgtat cgcgaatgac
     5761 caaatcatcc ccatccaaaa caatcgaaac gcttcccccc tgacaatact tgagggcatt
     5821 ggataaaatt tgttctatca agagacccag ccagcgtttg tcggtcttta ctgtcctatc
     5881 caactgcccc aagtccaagc tggtattggc ctgaatgaaa aatagagaat atttcttgac
     5941 cagacttctg accagctctt ccaaattgac ggattcgata accaaatcat catgaaagga
     6001 ctgtaaacgg agatagttca aaaccagacc tgtgtattgc tcaatcttga agagttctga
     6061 ttctaattga tgacgaactg gactactatc tacttcctta accaagagct gactggctgc
     6121 aatcggcgtt ttcatctggt gagcccaaag ggtatagtag tcatctaatt ctgtctgttc
     6181 ctgacgctgt ttttcaatca agagcttgtt ctggacttct agtcgctcca ctttttcctg
     6241 caacaaacgc tcactggctg tcccagtagt cactttctga ccacgccaga tttttccaaa
     6301 gcgggaaaat tccctgacaa aatcccagag gagggcgagg agccagcaga tagtgagcag
     6361 ggtgagggcg tagaaaacca gattcctttc gatgtcaaag agcccactat aagccagaat
     6421 ggtcgtggca aaaagacagt aactgaccag aaatagccaa cgatgacgga gccaagaagt
     6481 tagaaaatca gacaacattt ccttattcat gtgtccacac caggccgtag cctactcctt
     6541 tcttggtcgc aatcacatct ggcagatcca gttctgccaa tttcttacgc aggcgagcga
     6601 tgttaaccga cagggtattg tcatccacaa aaatatcact gttccagagt tctctcatca
     6661 gctcctcacg gctgaccact tccttgccat gttcaaataa aacgcgtaaa atctgaaatt
     6721 catttcgcgt cagctcttcc acaacctgtc cataggacac ctgcatggtc tttaggtcta
     6781 gggaaatctc ctcaaaccag agtaaacttt gttctccgac aaagtcatag gttcttctga
     6841 gaagcccctg tattttggcc aggaaaactg tcatatcaaa gggcttggtc acatagtcat
     6901 ccgcccccat attgatcgcc ataacgatat ccattggctg gtcatgggaa gacagaaaca
     6961 taatgggcac acgggatgtc ttgcgaattt cctgacacca gtaatagcca ttgaaaaacg
     7021 gcagaccaat atccagtaaa atcaaatggg gctgaaactc ttccatctgt tccaaaacca
     7081 tctgaaaatc cttgacctct tgcacctggt aaccccagtt tatcaagttt ttagcaacta
     7141 gttggctaat cgttttatca tcctcaacca gaagaattct ctgcataaca ttttccctct
     7201 cttactatat actatttatt atagcctaaa tttcagtaaa aaagggggat tttctacatt
     7261 gctaacccag atttgtcatt ccacacatat ttcgctatac tagaaaaaag aaaggattgc
     7321 catgccgaat ttactgaatt acatcgaaga tacccaatac gacagctttt acgaccagcc
     7381 cctcaacaaa ctggacattt tggccctgac cgagctttcc tacctacctt ttgacagact
     7441 ggttcccgct tcctttacag aaactggcat ccggctggac catctggccg agcagtttga
     7501 ggccacctat cagaatgatt tcccaccttt ttccatggtg accaaaaacc gcctagcctt
     7561 atttgccctt ctagccaaat ccatacgctt caagtctatc aaagcatttg gcttcgttga
     7621 cgactatcag ttggaccaag agcaacaatt ctccgctatc agctatcgcc tggatagacg
     7681 gaccatcttg acagcttttc gtgggactga tgacaccatc atcggttgga aggaagattt
     7741 ccacatgacc tatatggatg aaattcctgc ccagcgttct gcaagtggct atttagaaaa
     7801 gctgatgtct agtcaagatg gaaatttcta tatcgctggg cattcaaaag gtggaaattt
     7861 agccctttat gctgccagcc agcaagtccc tgagttgcaa gaacacatcc tagctattta
     7921 tccttttgat tctcctggac ttcataaaaa acatttagat gcccctggct acaaaaacat
     7981 ccaagaccgt atccacccta tcattcctca aaattctatt gtaggaatga tgttggaaac
     8041 acctaaaaac gcccaaattg ttcagagcaa cacagtcgga ctgctccaac acatcagctt
     8101 ttcgtgggaa attgaaggaa atgatttcaa gtcagcaccc accctgacca atgacagcct
     8161 acaaaccgac caaaccctaa aagcctggac tgctagcctg acggatgaag aattgaaaga
     8221 tttctttgac ctcttttttg gaattttcat ccaggcaggt attgagcgtt tcagcgacat
     8281 aactgtcaat cccctacaaa aattacagga aatggaccga ttgaggaaag aattttctcc
     8341 tcaagaagct gaaatgatgg acaagctcat tcggctcctc tttgataccc gttatcaaat
     8401 ctggagggac aatattccaa gccctgaaat ctctctacca gattggcgga aacttttcca
     8461 aagaaataca actgaaaata aagaaaacta gctcaaccac ctgagctagt ttttgttatc
     8521 gaatcttctt aaaaattggg ataatttttc taatcctttg attagagttt ctttttcaca
     8581 ggcatagccc agacggacat agccatcacg atcaaaccga ttaccaggca ctagaagaac
     8641 accgtattcc tgcagaagtt gcaagcaaaa atcttccatg ggcatatcca ctgcaatctt
     8701 gacaaagctt gtggatacga ctgctggtcg gatataggaa acgaggggtt cttcctcaat
     8761 ccattggtcc aaaatagcta aattttcttc taaaatgcgc cgatttcttt tcaaaatctc
     8821 ttggcgagaa gctagagcga gttgggccac cagatcgtca aagacacctg cacaaatcat
     8881 ggtgtaatcc cggtaatctc tcagaatatc ggttacttga tgattggcag ccacccaacc
     8941 gacacgaata cctggcagag aataggtctt agacagacta ttaaccgcaa tacccttgtc
     9001 atagacttct ataatagatg gcacatccag tccagaaaag gaacgataga cttcatccga
     9061 taggatgtaa gccccaactt cactagcaat ttccgccaat tcttccaaat aagccctatc
     9121 catgacagca ccagttggat tattggcatt attgatgcaa atcatcctgg tattgggacg
     9181 aatgagctga cgcagttttt ccaagtctgg caaccagcca tttccctcct caatctgcca
     9241 caaatccact tctgctccca aagactttgg aatatcgtag agttgttggt aggtcggata
     9301 aagggaaatg acatggtctc ctggctcaat caaaccataa agaactaaca agtttgcccc
     9361 tgttgccccg ttggtctgga gaatctgttc tggcttgacg cctgtataga gttgactaac
     9421 cgatttttta aatgctggtg aaccttctat ccagccataa ttgagtttag tgctctgcaa
     9481 tttcttataa aaatcctcag gattggttcc cgacaaggca aatagttcct ccaaagtcaa
     9541 tgaagaaatg gacactcctg caatatcata aatcgcgcta ttttcatgga cattcagcca
     9601 ttcctcaacg ccaaaacgtg gtaatttcat aagacttcct acttttattt atcctgctct
     9661 tattgtacca tattctttca ataattgtat aaatatgcga tatatcataa aaggaatata
     9721 tttttacaat tgaaaaagca gactttctca aacgagactg cctgctctgc
//
LOCUS       DBNFCX010000083         9635 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.083, whole genome shotgun sequence.
ACCESSION   DBNFCX010000083 DBNFCX010000000
VERSION     DBNFCX010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 9635)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9635)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9635
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.083"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            132..344
                     /locus_tag="AC1PJC_001783"
     CDS             132..344
                     /locus_tag="AC1PJC_001783"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620762.1"
                     /translation="MKQLDKNTLFISAVIVLSCSVLLFHMDPIQIVDREIWLWLHSFI
                     HVLFLKPAASLGFLMGLYLLYKALKK"
     gene            411..1295
                     /locus_tag="AC1PJC_001784"
     CDS             411..1295
                     /locus_tag="AC1PJC_001784"
                     /inference="COORDINATES: protein motif:HMM:NF012235.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6620763.1"
                     /translation="MLKVVDVCKRYGAHQVLSYVSFELQAGDLVALVGPNGVGKSTLL
                     NIISNTETADRGSVTINGRSNSDRAIFQDMSVMLDAQALYPQLTGYDHLTYVAATHKL
                     GKKEVDGLVEELGMGYYVKKRVAGYSMGMKQKLLFAMAVLPKPKLLLLDEPHIGLDPT
                     NIIQQREFLLNLQAEGVAILLSSHHLSEIEKLTNQVYFLKASKLIATEVELTADYDYH
                     LAVENSKQVQEFLRDYPQLLWKKAEQGLVEIFLPERDLLDCLDRIPIQQVAGLTKASD
                     YMESLYRDLYVEEGGEGT"
     gene            1292..3634
                     /locus_tag="AC1PJC_001785"
     CDS             1292..3634
                     /locus_tag="AC1PJC_001785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620764.1"
                     /translation="MRLNFEIKKILWSPLYCLLLLGFLSLAYLPISQRQVHQATYVET
                     YKKELSELASVLADIKIEEGLEETPRMVGLKSDIESVGQALDEGKFEAIPNYRKLMYQ
                     DLDYFISRNRQLFQTRNSLTLSEVERLARWNDWLLEYQLPDGPENKAWSTGRIVQAYL
                     ESLFGFLPVFLVLGFLLANQLSEKTLAHQVWQLRQWDSLSLQGMRRLVASLLSLLLAV
                     GIGLLFILVYDGLTGQLAVSSFQAPVEILGQSQLIGSWLYGLISIGFWLILLLAVRLL
                     FGFLDHLLASRLTFLVIGLLLALVLSYQAGAVAGWSGQILPLLAFPSFLDTAVFSQVF
                     LQVDVFLLLTIGLFFVYYVLTEKKRLVLTVGHQKEWETGPLDKVWSFEILILSRLKTW
                     KGLVLVNLLLALLFSLVTGLQKQEVAQEERVSMELVAQSYEQDGVYVEVLQSEINRLR
                     QLVKEDASYQEELELRLGLLQEYRVYKDLYVKQWQNYQENPNALPASHLAMLEAEQVY
                     LWAREEKAFANGDIGASQTVDNLRRYQTRNQVSQYYWQQLMEAGVPATKRGKDVILTS
                     LENRFDTNDALVPVDDPSWDRSRDLSGIGSLRSLFDGPVYLLVLLLAVWIGSRGKAVE
                     VAGKNWRLYQTQPVDLRQVLFTKWLLGLGQALGFTLLFLASIFLVNSLVGGIGYLEDG
                     LILLSHSERGIFLELLMGQELWAWFLPDAPYLLWMVFGLLVLEIVLVSLNHLLQVRFS
                     NRLVVFILLAGLLALLDYLLFQDLILDGQEVFRQLALLFS"
     gene            complement(3680..4294)
                     /gene="def"
                     /locus_tag="AC1PJC_001786"
     CDS             complement(3680..4294)
                     /gene="def"
                     /locus_tag="AC1PJC_001786"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HIP6620765.1"
                     /translation="MSVIERLTKAAHLIDMDDIIREGHPTLRQVAEEVAFPLSDQEII
                     LGEKMMQFLKHSQDPVMAEKMKLRGGVGLAAPQIDVSKRIIAVLVPNPEDEEGNPPAQ
                     AYSLQEVMYNPKIVAHSVQEAAMEGGEGCLSVDREVQGYVVRHARVTVDYMDKNGEKH
                     RIKLKGFNAIVVQHEIDHLNGVMFYDRIDPEHPFAVKEGMLVIE"
     gene            4424..5593
                     /locus_tag="AC1PJC_001787"
     CDS             4424..5593
                     /locus_tag="AC1PJC_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HIP6620766.1"
                     /translation="MKRILEKASLLALSTMLVSTFAVSPAIPQMIEHFAQQGIAAAQV
                     ENLITVTSFAIMVTLLANGLVVRFLSERNIIIAGLLLMAIGGALPMFLTAYPLILLAR
                     ILLGLGIGLINARAINIIGNFFTGQERVQMMGLRGSAEVLGSAGLTLLVGWLTQFGWQ
                     PAFLVYLFALVILALFLLFVPKEELLARMEVKVEENAPRVKLDKTMWMMGIYLAFLAF
                     FVINVNTFLTIRIPQIVLAKGIGTAQQASLILSLMQVMGIVAGTVFSSLVGRLKGWLL
                     AVSYVVFGLAVIGIAFADNLWVLGLGGMVSGFFYSIILTIVFSQVTDRAPKALLNAVM
                     TIVLMGCNIGGATSAILPTYLEKLNPTPTGAFGIYAIGCALISAGLIYKQLKKWE"
     gene            5890..6516
                     /locus_tag="AC1PJC_001788"
     CDS             5890..6516
                     /locus_tag="AC1PJC_001788"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIP6620767.1"
                     /translation="MLENNRLNELILRFPEDVQLIFKDMIPSYQLGYADYVYQTDNYA
                     TQNRRIKNLAKNFRRMDYFYIMPLPQDLALEIANQWRYQPPLDAYTISANPETYAEMI
                     SPEARGDRFFAVIRNAALMGYFCIGQDGETVDIRLGMKPSLTGQGNGRAFYQAIEDYL
                     VEHVQPASIKLTVASSHQVAQKLFHALGFTEIEKQAEYIKMEKKVVCD"
     gene            6507..7235
                     /locus_tag="AC1PJC_001789"
     CDS             6507..7235
                     /locus_tag="AC1PJC_001789"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004185339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_function: GO:0140098 - catalytic activity, acting on
                     RNA [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HIP6620768.1"
                     /translation="MRLDKFLVDCGVGSRTEVKKLLKNKQVTVNGQVETSPKQQINEK
                     QDQIALAGQVLSHETFVYYLLNKPKGVISATEDDRHRTVLDLLDNTARQKEVFPVGRL
                     DIDTHGLLLLTNNGQLAHAMLSPKKHVDKLYRAQVDGIMTQEDVERFAAGIELKDFTC
                     QPAQLTILSTDEAKQTSLVDITIREGKFHQIKRMVQACGKTVTDLQRLTMGPLRLDPK
                     LALGEYRRLTAAELKQLEVFGVEL"
     gene            complement(7277..7858)
                     /locus_tag="AC1PJC_001790"
     CDS             complement(7277..7858)
                     /locus_tag="AC1PJC_001790"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002959164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016763 - pentosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0043101 - purine-containing compound
                     salvage [Evidence IEA];
                     GO_process: GO:0046110 - xanthine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HIP6620769.1"
                     /translation="MKALEARILKDGQVLGENILKVDSFLTHQVDFRLMKEMGQVLAD
                     AYRSKEITKVVTIEASGIAPAVYVAESLDVPMIFAKKHKNITMTEGILTAEVYSFTKQ
                     VTSTVSIASKFLSPEDRILIVDDFLANGQAAKGLIDIIQQAGAQVIGVGIVIEKSFQD
                     GRQVLIDAGVPVTSLARIEKFQDGQVVFAPADI"
     gene            8075..9385
                     /locus_tag="AC1PJC_001791"
     CDS             8075..9385
                     /locus_tag="AC1PJC_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015851 - nucleobase transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleobase:cation symporter-2 family protein"
                     /protein_id="HIP6620770.1"
                     /translation="MSQKITNEHSSDMLYGIDEQPPKGMAVLLAFQHILAAFAGIIAV
                     PLVVASALGLSVEDTSIMVSASIFVAGIATILQSKGVGPVGSRVSGMMGTDFTFANPA
                     ISVGSQLGIAGIVGATIAGSFVEIALSRFVKPLMRFFPPLITGTVVSLIGITLMPVSM
                     DWAAGGAGASDYASVENISIAFIVLVFTLALNHYGKGMLKTASVFFGMVFGYILCIFL
                     GKVDLSAVGEAAWFALPKIFHYGVKFDLSSILAFIPAYVVSLIGTVGIMMAIGEASNQ
                     KISSERAANGVLADGVGSLIAGVFGAGPNTAFSQNVGLITLTKVASRHVMILAGIILT
                     LLGVFPKLSALISIMPQPVLGGVGIIMFGLVAAQGIKTLATVKIGDRELLIISIAFAL
                     GIGVTVRPELLSHLPSALQMVFSSGISTGTLAALVLNLVLKEEK"
BASE COUNT         2380 a         1998 c         2323 g         2934 t
ORIGIN      
        1 tcttctcttt ttaccacagc aatacttatt tttacttgtt tgtttaaata aaaaatgtta
       61 ttgttattat attgaatagc ttcaaagggt gtggactttg gaaatagtca gttatgaaaa
      121 ggagtaacct aatgaaacag cttgataaaa acaccttatt tataagtgca gttattgttc
      181 tttcgtgtag tgtcctatta tttcatatgg acccgattca gattgtagat agagagattt
      241 ggctctggct acattcattt attcatgtgc tatttttaaa acctgctgct agtctaggtt
      301 ttcttatggg gctttatctg ctatacaagg ctctcaagaa gtagtctagc taactaagct
      361 gatgaaagtc tgctacaccg ctctgccatt tctccaagga aggagtttct atgctaaaag
      421 tagttgatgt ctgcaagcga tacggtgccc accaggtctt gtcttatgtg tcctttgagt
      481 tgcaagcggg ggacttggtt gccctagtcg gtcccaatgg tgtgggaaaa tccactctgt
      541 tgaatatcat cagcaacaca gaaaccgctg accgtgggtc ggtaaccatc aatggtcgtt
      601 ccaatagtga ccgagcgatt tttcaggata tgtctgtcat gttggacgcc caagcccttt
      661 atccacagtt gacgggttac gaccatctga cctatgtggc tgccacccac aagctgggga
      721 aaaaggaagt ggatgggctg gtggaagaat tggggatggg ctactatgtc aaaaagcggg
      781 tggctggcta ttccatgggc atgaagcaaa agctgctctt tgccatggct gtccttccca
      841 agcccaagct cttgttgctg gatgaacccc atatcggctt ggatccgacc aatatcattc
      901 aacagcggga atttcttcta aacctacaag cagaaggggt tgccattttg ctttcttccc
      961 accatctgtc ggagattgag aagctgacta atcaggttta tttcctcaag gccagcaagt
     1021 tgattgccac agaagtggag ttaacggctg attatgatta ccatcttgct gtggaaaact
     1081 ccaagcaggt tcaggaattt ttacgggatt atcctcaact cttgtggaaa aaggcagagc
     1141 agggtctggt ggaaatcttc ttgcctgaga gagatttgct agattgtttg gatcgtattc
     1201 caatccagca ggtggctggt cttacaaaag ccagcgacta tatggaatcc ctctatcgtg
     1261 atctctacgt ggaggaaggt ggtgagggga catgaggctg aactttgaaa tcaagaaaat
     1321 cctctggtcg cctctttact gcctgctctt gctgggtttt ctaagtctgg cctaccttcc
     1381 tatttctcag cgccaagtcc accaagcgac ctatgtggaa acctataaaa aagaattgag
     1441 tgaattggct agtgtcttgg cagatataaa aattgaggag ggattagaag aaacaccgcg
     1501 gatggtgggc ttgaaatccg atatagaaag tgtcggtcag gccttggacg agggaaagtt
     1561 tgaagctatc cccaactacc gcaaactcat gtatcaggat ttggactatt ttatcagtcg
     1621 caatcgacag ctttttcaaa ctcggaattc cttgacgctt agtgaggtcg agcgtttggc
     1681 cagatggaat gactggttgt tggagtatca attgcctgat ggtcctgaaa acaaggcttg
     1741 gtcaacaggg cgtattgttc aagcctactt agaaagtttg tttggttttc ttcccgtatt
     1801 tttggtgctt ggttttctac ttgccaatca actgtcggaa aagacactgg cgcatcaagt
     1861 ttggcagttg cggcaatggg atagtctgag tttgcagggg atgaggcgtt tggttgcttc
     1921 cttgctttcg cttttgctgg ctgtggggat aggtttactt tttatcctgg tctatgatgg
     1981 gctgacaggt cagttggctg tatctagttt tcaagcccct gttgagattt tgggtcagag
     2041 tcagttgata ggctcttggc tttacgggct tatctcgatt ggtttttggc taatcttact
     2101 cctagctgtt cgcctacttt ttggattttt ggaccacttg ttagccagtc ggctgacttt
     2161 tttggtgatt ggattactgt tggctttggt tctttcctat caggctggtg cagtagctgg
     2221 ttggtcaggt caaattctgc ctttgcttgc ctttcctagt tttttagaca cagctgtatt
     2281 ttcacaggtc tttttacagg tggatgtttt cctcctgcta accattgggc ttttctttgt
     2341 ttattatgtg ctgacagaaa agaaaaggct ggtcctgacc gtggggcatc agaaagaatg
     2401 ggaaaccggt cctttggaca aggtttggtc ttttgaaata ctcatcctta gtcggctcaa
     2461 gacttggaaa gggctcgtct tagtaaactt gctcctagct ctgctatttt ccctagtaac
     2521 aggcctacaa aagcaagagg ttgcccagga ggagagggtt tcgatggagt tggttgccca
     2581 gtcctatgag caggatgggg tctatgtgga ggttttgcag tcggaaatca accgtctgag
     2641 gcagttggtc aaagaggacg cgagctatca ggaagagttg gagctgaggc ttggtctctt
     2701 gcaagaatat cgtgtctata aggacctcta tgtcaagcag tggcagaact atcaggaaaa
     2761 tcctaatgct ttgccagcca gtcaccttgc tatgctggag gcagagcagg tctatctatg
     2821 ggctagagag gagaaggctt ttgccaatgg tgatattggg gccagccaga cggtggacaa
     2881 tcttcgccgt taccagaccc gcaatcaggt cagtcagtat tactggcagc agctgatgga
     2941 ggctggggtg ccagcaacta agcgaggaaa ggatgtcatt ttgaccagct tggaaaatcg
     3001 ttttgatacc aatgatgcct tggttcccgt agacgatcca tcttgggacc gctccagaga
     3061 tctgtcaggt atcggcagtc tgcgctctct ttttgatggt ccggtctatt tgttggtgct
     3121 cttgctggcg gtttggattg gcagtcgggg taaggcggtg gaggttgcag ggaaaaactg
     3181 gcgtctctat cagacccagc ctgtggattt gcgtcaggtt ctattcacca agtggttgct
     3241 aggactgggc caggcacttg gttttacgct gctctttcta gctagtattt tcttagtcaa
     3301 tagtctggtc ggaggaatcg gttatctgga agatggcctt atcttgcttt cgcattcgga
     3361 gaggggtatt tttcttgaac tcctgatggg acaagaactc tgggcttggt tcctgcccga
     3421 tgctccttat ctcttgtgga tggtgtttgg cttgcttgtc ttggaaattg ttctagtcag
     3481 tctcaatcat cttttgcaag ttcggttttc aaatcgctta gtggtattca tcctattagc
     3541 tggtttgctg gctctgctgg actacctcct ctttcaagac ctgattttgg atgggcagga
     3601 ggtctttagg cagttagctc tgctattttc ataaaaaaaa gaaaaactgg ctgaaaattt
     3661 ttcagtcagt ttcttatgtt tattcaatta ccaacatgcc ttctttaacg gcaaatgggt
     3721 gttctgggtc aatgcggtcg tagaacatga caccgttgag gtggtcgatt tcgtgttgga
     3781 ccacaatggc attaaatcct ttgagtttga tacggtgctt ttctccgttt ttgtccatgt
     3841 aatcaacagt cacgcgcgca tggcggacaa cgtagccttg gacttcgcgg tcaacggata
     3901 agcagccctc gcccccttcc atagccgctt cttggacaga atgtgccacg attttagggt
     3961 tgtacatgac ctcttggagg gagtaggctt gggcaggtgg attgccttcc tcatcttctg
     4021 gatttgggac taagacagca atgatgcgtt tggaaacgtc aatctgaggt gcagctagac
     4081 caactccacc acggagtttc atcttctccg ccatgacagg atcctgcgaa tgtttgagga
     4141 actgcatcat tttttcgcct aaaataattt cctgatcaga tagtggaaat gcaacttctt
     4201 cggcaacttg gcgtagggtt ggatgccctt cacggatgat gtcatccatg tcaatcaaat
     4261 gggcagcttt tgtcaatcgt tcaataacag acatgattct ctcctttgaa tatagttaag
     4321 ataagtatag catgaaatgg gagagaataa aagtcggact tttctatcca ttcgctttca
     4381 aatctgttat actagtaaaa gacgaacgtt gaaagggaga aaaatgaaaa gaattttaga
     4441 aaaagccagt ttgctggccc tatccaccat gctggtttcg acatttgctg tctcgccagc
     4501 tattccacag atgattgagc attttgccca gcagggaatt gcagcggccc aggtggaaaa
     4561 cttaattacg gtgacctctt ttgctattat ggttactcta ttggcaaacg gtctagttgt
     4621 ccgtttcttg tctgaacgaa acattatcat tgcagggctt ttgcttatgg ccatcggcgg
     4681 agctttgccc atgtttctaa ctgcttatcc tctgatttta ttggctcgca tcttgcttgg
     4741 tttggggatt ggcttaatca atgcgcgtgc gattaacatc atcggtaatt ttttcaccgg
     4801 tcaggagcgg gtgcagatga tgggcttgcg tggttcagca gaggttttgg gaagcgcagg
     4861 cttaacgctt cttgtcggtt ggttgaccca gtttggttgg caacctgcct tcttggtcta
     4921 cctttttgcc ttggtcatct tggctctctt ccttctcttt gttcccaagg aggaattgct
     4981 ggctcgtatg gaggtaaagg ttgaggagaa cgcgcccagg gtcaaactgg acaagaccat
     5041 gtggatgatg ggaatttatc tggcattctt agccttcttt gttatcaatg tcaatacctt
     5101 cctgaccatt cgtattcctc agattgtttt agccaagggc atcggtactg ctcagcaagc
     5161 cagtctcatt ctcagtctta tgcaggtcat ggggattgtg gcagggacgg tctttagtag
     5221 cctggttggt cgtttgaagg gttggctttt agctgtttcc tacgtggtct ttggactagc
     5281 ggttatcggc attgcctttg cggataatct ctgggtgctg ggactcggtg gcatggtgtc
     5341 aggatttttc tacagcatca ttctaaccat tgtctttagt caggtaacag accgtgcacc
     5401 caaggccttg ctcaatgcgg tcatgacaat cgtccttatg ggctgcaata tcggtggggc
     5461 gacatctgct atcttgccga cttatctgga aaaactcaac ccaaccccaa caggtgcctt
     5521 tggtatttac gccatcggct gtgccttgat aagcgcagga ttgatttata aacaactgaa
     5581 gaagtgggag tgagaaagaa ctcgactggt ctaaaaagag ttcgtcaaca agtctttatt
     5641 tcaagttgtt gagctgaaac agtctatccc cagactgttt cactcccacc cccgcatagc
     5701 tcaaactgtc tgggagacag tttgaggttg gagatgaagc gaactttgtt cgcaacagtc
     5761 gtaatggtca gatttggagt gtaatacacg aacaaatctg ccaatcaacc actgcgctga
     5821 gatgttgaca cgaactctaa gtagtagccg ctgggctttt ttcccagcct cttttggtat
     5881 aatattctta tgttagaaaa taaccgctta aatgaattaa tactacgttt tcccgaggat
     5941 gttcagttga tttttaagga catgattccc tcctatcagt tgggctatgc ggattatgtc
     6001 tatcagacag ataattacgc cacccaaaac cgtcggatta aaaatttggc aaaaaatttc
     6061 cgaagaatgg attattttta catcatgccc ctgccccagg atctggcatt ggaaattgct
     6121 aaccaatggc gctatcaacc acctttggat gcctatacaa ttagtgcaaa ccccgagact
     6181 tatgctgaga tgatttcacc agaggcgcgt ggggaccgct tttttgcagt catccgcaat
     6241 gccgccctca tgggctattt ctgtattggc caagatggcg agacagttga cattcgtttg
     6301 gggatgaaac cttctttgac aggtcaggga aatggcagag ctttctatca ggctattgaa
     6361 gactatttag tagagcatgt tcagccagct agtatcaaac tgacagttgc tagctctcat
     6421 caagttgccc aaaaactctt tcatgctctt ggttttacag aaatagaaaa gcaagcagaa
     6481 tatatcaaaa tggaaaagaa agtcgtatgc gattagataa atttttagtg gattgtggtg
     6541 ttggcagtcg gacagaagtc aagaaactcc tgaaaaacaa gcaagtcaca gtcaacggcc
     6601 aagtagaaac ctccccaaaa cagcagatta acgaaaaaca agaccagatt gcactagcag
     6661 gccaggtctt gagtcatgaa acctttgttt actatctgtt aaacaagccc aagggtgtga
     6721 tttcagccac cgaggatgac cgtcatcgga ctgtcttgga cctgctagat aatacagctc
     6781 gccagaagga agtttttcct gttggacgct tggacatcga tacccatggc ttgctccttt
     6841 tgaccaacaa cggtcagctg gctcatgcca tgctttctcc gaaaaaacat gttgataaac
     6901 tctaccgtgc acaggtggac gggatcatga cccaagagga tgtcgaacga tttgcggcag
     6961 gaattgagct gaaagacttt acctgtcaac cagcccagtt gaccatcctc tctacagatg
     7021 aagctaagca gacctcgctc gttgacatca ccatccgaga agggaaattt caccaaatca
     7081 aacgcatggt gcaggcctgt ggcaagaccg tgacagactt gcaacgattg accatggggc
     7141 ctcttcgctt agatccaaaa ttagcgcttg gagaatatcg caggttgact gctgccgaat
     7201 taaagcaatt agaagtcttt ggtgtggaat tatagataaa tagaagagac ttgctcccga
     7261 ttggaagcaa gtccttttaa atatccgcag gtgcaaaaac aacctgtcca tcttgaaatt
     7321 tttcaatacg agcgagagaa gtaacaggga cacctgcatc tatcaagact tggcggccgt
     7381 cttggaagga cttctcgatg acgataccaa cgccaattac ctgagctccg gcctgttgga
     7441 taatgtcaat caagccttta gcagcttgtc cattggccaa aaagtcatca acgattagaa
     7501 tacgatcctc aggtgacaaa aacttactag caatagaaac ggtgctagta acttgcttgg
     7561 taaaggaata gacttcggca gtcaaaatgc cttcggtcat agtaatattt ttatgctttt
     7621 tagcaaaaat cattggcaca tctaagcttt ctgcaacata gacggctggt gcaatacccg
     7681 aggcttcaat cgtgacaacc ttggtaattt ctttagagcg ataggcatct gccaagacct
     7741 gccccatttc tttcatcaag cgaaaatcaa cctgatgggt caagaatgag tcaactttta
     7801 agatgttttc tcctaatacc tgaccatctt ttaaaatgcg tgcctccaaa gctttcatat
     7861 ctatcttctc ctccaaatga tacttttgtg tattatagca ttttttggct aaaatcaaaa
     7921 caataaacga atttttgtgt tgagatattg tatatattga caaaattcat tgcaaaatac
     7981 gaatgttctg tgtttatcgg agcaaaatgt attgaaaatg attatatttt ctgttagact
     8041 aataccaata tttaggaata aagaaggaga aatcatgtct cagaaaataa caaacgaaca
     8101 ttcttcggat atgctttacg gaattgatga acaaccacca aaagggatgg ctgttttgct
     8161 tgcttttcag catattttag cagcttttgc aggaatcatc gcagtgcctc ttgtcgttgc
     8221 aagtgccttg ggattatcgg tagaagatac ttctattatg gtatcagcct ctatctttgt
     8281 tgctggtatt gctaccattt tacaatctaa aggtgttggg ccagtaggtt cacgtgtctc
     8341 tggtatgatg gggacggact ttacctttgc caatccagct atcagcgttg gtagtcagtt
     8401 gggaattgct ggtattgtag gagcaaccat tgctggttca tttgtagaga ttgctctcag
     8461 tcgttttgtc aaacccttga tgcgcttctt tccaccattg attacaggga ccgttgtatc
     8521 cctcatcggt attaccctca tgccagttag tatggactgg gcggctggtg gagctggcgc
     8581 ttcagactat gcttcagttg aaaatatcag tattgccttt atcgtcttgg tcttcacttt
     8641 ggctttaaat cattatggta aaggaatgct gaaaacagcc tctgtcttct ttgggatggt
     8701 ttttggttat atcttgtgta tttttcttgg gaaagttgat ttatcggctg taggagaagc
     8761 agcctggttt gctcttccta aaattttcca ttacggtgta aaatttgacc tatcttctat
     8821 tctagccttc attccagctt atgtcgtatc cttgatcgga acggtcggaa ttatgatggc
     8881 cattggagaa gcctcaaatc aaaagatttc ttctgagcgg gcagcaaatg gtgttctggc
     8941 agatggtgtt ggttccttga ttgcaggtgt ttttggtgct ggtccaaata cagccttctc
     9001 acaaaacgtt ggcctcatta ctttgacaaa agttgctagt cgtcatgtca tgattttagc
     9061 aggtattatc ttaaccctac ttggcgtctt tcccaaatta tcagccttga tttccatcat
     9121 gccgcagcct gttcttggtg gtgttgggat tatcatgttc ggtttggttg ctgcccaagg
     9181 gattaagact cttgcaactg taaaaattgg tgaccgtgag ctcttgatta tctctattgc
     9241 ctttgcgctg gggattggag tgaccgttcg tccagaatta ttgagtcatc ttccatcagc
     9301 tcttcaaatg gtcttctcat caggtatttc aacagggacc ttggctgcct tggtattaaa
     9361 tctggtgttg aaagaggaaa aataagagtt attttattag tttgcttaga ttaaaagaga
     9421 aggctgggca aaaagcccag gaccactact cagagttcgt gtcaacatct cagcgcagtg
     9481 gttgattggc agatttgttc gtgttttaca ctccaaatct ggtctctacg actgatgcga
     9541 acagagttcg cttcatttcc aacctccaac agtcactact ctgactgttg gagctatgcg
     9601 ggggtgggag tgaaacagtc tggggataga ctgtt
//
LOCUS       DBNFCX010000084         9443 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.084, whole genome shotgun sequence.
ACCESSION   DBNFCX010000084 DBNFCX010000000
VERSION     DBNFCX010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 9443)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9443)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9443
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.084"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            85..660
                     /locus_tag="AC1PJC_001792"
     CDS             85..660
                     /locus_tag="AC1PJC_001792"
                     /inference="COORDINATES: protein motif:HMM:NF016932.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HIP6620771.1"
                     /translation="MKFDVKIVANHILNSVGGTPKVQRFYNSNKNQFIDIFQSHNNPM
                     NTVNTFSTIGLSMYSIDRKFADDSELRVEFIAASPAENTLFANVLASCSFNIISGTHT
                     CSHGTVFTNILDQYFEGINMKHIMFVSPSLWNIDDLLFDDRTITWLMALPISEKELEY
                     LRNNGSDQLEQLFEEQQIDFYDLNRPDVVFR"
     gene            complement(719..937)
                     /locus_tag="AC1PJC_001793"
                     /pseudo
     CDS             complement(719..937)
                     /locus_tag="AC1PJC_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003059249.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
     gene            complement(1203..1352)
                     /gene="rpmG"
                     /locus_tag="AC1PJC_001794"
     CDS             complement(1203..1352)
                     /gene="rpmG"
                     /locus_tag="AC1PJC_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001265622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HIP6620772.1"
                     /translation="MRVNITLEHKESGERLYLTSKNKRNTPDRLQLKKYSPKLRKHVI
                     FTEVK"
     gene            complement(1368..1550)
                     /gene="rpmF"
                     /locus_tag="AC1PJC_001795"
     CDS             complement(1368..1550)
                     /gene="rpmF"
                     /locus_tag="AC1PJC_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000290417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HIP6620773.1"
                     /translation="MAVPARRTSKAKKNKRRTHYKVAAPTVKFDETTGDYSRSHRVSL
                     KGYYKGRKIAKAASAE"
     gene            1826..3109
                     /gene="hisS"
                     /locus_tag="AC1PJC_001796"
     CDS             1826..3109
                     /gene="hisS"
                     /locus_tag="AC1PJC_001796"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004821 - histidine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006427 - histidyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HIP6620774.1"
                     /translation="MKLQKPKGTQDLLPQDSAKWQYVESFTRSIFKQYNYAEIRTPIF
                     EHYEVISRSVGDTTDIVTKEMYDFYDKGERHITLRPEGTAPVVRSYVENKLFAPEVQK
                     PAKFYYMGPMFRYERPQAGRLRQFHQIGVECFGSNNPATDVETIAMAYHFFEELGIKD
                     IRLHLNSLGNPESRAAYRQALIDYLTPLKDQLSKDSQRRLEENPLRVLDSKEKEDKIA
                     VENAPSILDYLDEESTAHFEAVKSMLDSLGIAYTIDTNMVRGLDYYNHTIFEFMTEVG
                     GNDLTICAGGRYDGLVTYFGGPETSAFGFGMGIERLILVLEKQGIELPLDTQLDVYIA
                     VLGQEANSGALELVQAIRKQGFRAERDYLDRKLKAQFKSADVFGAKAIITLGGSEIES
                     GQVVVKNNQTRSQVETSLEALKTDFASTLEELEKQ"
     gene            complement(3190..4215)
                     /gene="adhP"
                     /locus_tag="AC1PJC_001797"
     CDS             complement(3190..4215)
                     /gene="adhP"
                     /locus_tag="AC1PJC_001797"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HIP6620775.1"
                     /translation="MKAVVVNPESTGVVVVEKELRPLEAGEALVQIEYCGVCHTDLHV
                     ANGDFGKVPGRVLGHEGIGIVTEIAPGVTSLKVGDRVSVAWFFQGCGMCEYCTTGRET
                     LCRTVKNAGYSVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTCYKAIKEAHL
                     EPGQWIAIYGAGGLGNLAVQYAKKVFNAHVIAVDINNDKLELAKEVGADVTINGLEVE
                     DVPGYIKEITGGGVHSTVVTAVSKVAFNQAIDSVRAGGYVVAVGLPSEYMDLSIVKTV
                     LDGIKVVGSLVGTRKDLEEAFHFGAMGLVVPVVQKRPVEDAEAVFDEMAAGTIQGRMV
                     LDFCHSH"
     gene            4668..7319
                     /gene="adhE"
                     /locus_tag="AC1PJC_001798"
                     /gene_synonym="adhC"
     CDS             4668..7319
                     /gene="adhE"
                     /locus_tag="AC1PJC_001798"
                     /gene_synonym="adhC"
                     /EC_number="1.1.1.1"
                     /EC_number="1.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000763984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004022 - alcohol dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006066 - alcohol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0015976 - carbon utilization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetaldehyde-CoA/alcohol
                     dehydrogenase"
                     /protein_id="HIP6620776.1"
                     /translation="MADKKVVSPEEKLVEARKHVDELVQKGLVALDEFRKLGQEEVDY
                     IVAKASVAALDKHGELAMHAFEETKRGVFEDKATKNLFACEHVVNNMRHTKTVGVIEE
                     DEVTGLTLIAEPVGVVCGITPTTNPTSTAIFKSLIALKTRNPIVFAFHPSAQESSAHA
                     ARVVYEAAVAAGAPENCIQWITKPSMEATSELMKHDGIATILATGGNAMVRAAYSCGK
                     PALGVGAGNVPAYVEKSANIRQAAHDIVMSKSFDNGMVCASEQAVIIDKEVYDEFVAE
                     FKSYKTYFVNKKEKALLEEYCFGVKANSKNCAEGKLNADIVGRPAAWIAEQAGFSVPE
                     GTNILAAEVAEIGEKEPLTREKLSPVIAVLKVDGRAEGLEAARQMVEFHGLGHSAAIH
                     TEDAELAKEFGTIVRAIRVIWNSPSTFGGIGDVYNAFLPSLTLGCGSYGRNSISDNVS
                     AMNLLNIKKVGRRRNNMQWFKVPSKTYFERDSIQYLQKCRDVERVMIVTDRAMVELGF
                     LDRIIEQLDLRRNKVVYQIFSDVEPDPDITTVYKGTELMRTFKPDTIIALGGGSPMDA
                     AKVMWLFYEQPTVDFHDLVQKFMDIRKRAFKFPELGKKSKFIAIPTTSGTGSEVTPFA
                     VISDKANNRKYPIADYSLTPTVAIVDPALVLTVPAHVTADTGMDVLTHATEAYVSTVA
                     NDFTDGLALQAIKLVFENLESSVKNADFVSREKMHNASTMAGMAFANAFLGISHSMAH
                     KIGGRFHTVHGRTNAILLPYVIRYNGTRPAKTATWPKYNYYKADEKYQDIARLLGLPC
                     STPEEAVAAYAQAVYDLGERIGIQMNLKAQGIDEKELKEHSRELALLAYEDQCTPANP
                     RLAMVDHMQEIIEDAYYGYKERPGRLK"
     gene            7771..9255
                     /gene="thrC"
                     /locus_tag="AC1PJC_001799"
     CDS             7771..9255
                     /gene="thrC"
                     /locus_tag="AC1PJC_001799"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006595200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HIP6620777.1"
                     /translation="MTLVYQSTRDAKNTVSASQAILQGLATDGGLFTPISIPTVDLDF
                     SVLKDASYQEVAKLILSAFLDDFTADELDYCINNAYDSKFDTPVIAPVVKLKGQYNLE
                     LFRGSTIAFKDMALSILPYLMTTAAKKHGLENEIVILTATSGDTGKAAMAGFADVPGT
                     QIIVFYPRDGVSKVQELQMTTQTGANTHVVAIDGNFDDAQTNVKHMFNDEALRAKLAA
                     KKLQFSSANSMNIGRLVPQIVYYVYAYAQLVKTGEIAAGDKVNFTVPTGNFGNILAAY
                     YAKQIGLPVGKLICASNDNNVLTDFFSTGVYDKNRTFRVTTSPSMDILVSSNLERLIF
                     HLFGNDAGKTADLMEALNTAGQYDIQGADADILSLFAAAFATEEETAAEIKRVYDESD
                     YIEDPHTAVASAVYKQYVEQTGDQTPTVIASTASPYKFPVVAVEAVTGQSGLSDFEAL
                     AKLHEISGVALPPAVDGLETAPVRHNTVVAADDMQAEVERYLGV"
BASE COUNT         2788 a         1950 c         2023 g         2682 t
ORIGIN      
        1 acctgaactt cccccatcca atatgggaca tggaggggaa gatttaacaa atacatattt
       61 tggaccatag aaggattttt gtaaatgaaa tttgatgtta aaatagtggc taatcatatt
      121 cttaacagtg ttggtggaac acctaaagtt cagaggtttt acaattcaaa taagaatcaa
      181 tttattgata tttttcaaag tcataataat ccgatgaata ctgtcaatac tttttcaaca
      241 ataggtttat caatgtacag cattgataga aaatttgccg atgattcgga gttgagagta
      301 gagtttatag ctgcgtcgcc tgcagaaaac actctatttg caaatgtgtt ggcaagttgc
      361 tcctttaata ttatttctgg aacgcatact tgctctcatg gtactgtttt tactaatatt
      421 ttggatcagt attttgaggg tatcaatatg aagcatatta tgttcgtctc tccgtccttg
      481 tggaatattg atgatcttct atttgatgat aggactatta catggctcat ggcgttacca
      541 atatcagaaa aggagttaga atacttgcgt aataatggca gtgatcagtt agaacaattg
      601 tttgaagagc agcaaattga tttctatgat ttgaatagac cagatgttgt ttttagataa
      661 ggcaatatat tgacgagtac tcaaaaatcc cttgaagaat taatttcttc aaggaatttt
      721 actgttccat aggcataaag ttcccaacta ttttccccac aatccttggt tcatcttctg
      781 ctggggcaaa tttgtctggg taatccttat tgatggagac cagacggaag ccgttgtctt
      841 caaggtagac tttctttatg aagacttggt cattccaagc aatggcgtag actgcactgt
      901 cgtaatcaaa atcaccttct cttataagag cgacttcaaa ctggctccat tttcttaatc
      961 aagaccggga caataatctt gtattgaaca atcaaatggt agcaaatgcg gagaaattag
     1021 atacaacaaa agagcacctc atttatttga agtgctcttc taatatctgc atgttctact
     1081 ttattttatt atctaaaaaa tgtagagttt caattgattt gtactgcaat gtaatgaaag
     1141 ttcatctttc aaaaatcgca taaaatcaag gtttctaccg tctattgacg tgtagtgaat
     1201 ccctatttca cctcagtaaa aatcacgtgc ttacgcaatt ttggtgagta ttttttcaat
     1261 tgaagacggt ctggagtgtt acgtttgttt tttgaagtaa ggtacaaacg ctcaccagat
     1321 tctttgtgtt caagtgtaat atttacgcgc atggtatctc ccttctatta ttcagctgaa
     1381 gcagccttag cgattttacg tcctttgtag tatcctttca aagatacacg gtgtgaacgt
     1441 gagtaatctc cagtagtttc atcaaatttc acagttggag ctgctacttt atagtgagta
     1501 cgacgtttgt ttttcttcgc ttttgaagtg cgacgtgcag gtactgccat ttatttcttc
     1561 ctccattaaa tgtcagggcc aagccccttt taaatctaaa aatagtgcgt atgactttcg
     1621 ccaactttaa cagtataaca aaagtttttt gtaaagtaaa gttacttgac agattttttt
     1681 catttttttg gaaaatagca gagcatttat ggtaaaataa ggaggattgc aaggctcgac
     1741 tggtagagtt tgagcactta tgacttaatt tggaaaggaa taagcacaac ttcgagtgat
     1801 gtaagttggc tttatacact ttattatgaa actacaaaaa cctaaaggaa cacaggattt
     1861 actaccgcag gattctgcca aatggcagta cgtggaaagc tttacccgca gcattttcaa
     1921 acagtacaat tacgctgaga ttcgcacacc gattttcgag cattacgagg tgatcagccg
     1981 ttcggttggc gatacgacgg acattgtgac caaggagatg tacgatttct atgacaaggg
     2041 agagcgtcat atcactcttc gtccagaagg gacggcaccg gttgttcgct cctatgtaga
     2101 aaacaagctc tttgctccag aagtacaaaa gccagctaag ttctattaca tgggtcccat
     2161 gttccgctac gagcgtccgc aggctggtcg tctacgccag ttccaccaga ttggtgtgga
     2221 gtgctttggt tccaataacc cagcgacaga cgtagaaacc attgctatgg cctatcattt
     2281 ctttgaagag ttggggatca aggacattcg tctccacctc aacagtctgg gcaatccaga
     2341 gagccgtgcc gcttatcgcc aggccttgat tgactacctg acgccactta aagaccagct
     2401 atctaaggac agtcagcgcc gcttggaaga aaatcccttg cgtgtgttgg attccaagga
     2461 aaaagaagac aagattgctg tggaaaatgc accgtccatc ttggactatc tagatgaaga
     2521 aagtacagct cattttgaag cggtcaagtc tatgttggac agcctaggta ttgcttacac
     2581 cattgacacc aacatggtgc gtggtttgga ctactacaac cacaccattt tcgagtttat
     2641 gacagaagtg ggtggtaacg acctgaccat ctgtgccggt ggacgttacg acggtttggt
     2701 gacctacttt ggcggacctg aaacgtcagc ttttggcttt ggtatgggca ttgagcgcct
     2761 catcctagtc cttgaaaagc aaggcatcga gctccctctc gacacccagt tagatgttta
     2821 catcgcggtt ttaggtcagg aggccaatag cggagcgttg gagctggttc aagccatccg
     2881 caagcaaggt ttccgtgcag agcgtgacta tctggaccgc aagctcaagg cccagtttaa
     2941 gtcagcagat gtctttggag ccaaggccat cattaccctg ggtggtagcg aaatcgaatc
     3001 tggacaggtt gtggttaaaa ataaccagac aagaagtcaa gttgaaacaa gcttggaagc
     3061 actcaaaaca gattttgcaa gtactttaga agaattggag aagcagtagt ctaaagctgc
     3121 ttctttttat tttagaaagc aaaaaagaag cgattggata atcacttctt gaaaatagtg
     3181 gagaacgcat tagtgtgagt ggcagaagtc taagaccatg cggccttgaa tagttcccgc
     3241 tgccatttca tcaaagactg cttcggcatc ttcgactgga cgtttttgaa cgactggaac
     3301 aactagtccc atagcaccga agtggaaggc ttcttctaaa tctttacgag taccaactag
     3361 tgagccgacc actttgatac cgtctagcac agtcttcacg atactgaggt ccatgtattc
     3421 agatggaagt ccgacagcca ccacatagcc accagcacga acactgtcaa tagcttggtt
     3481 gaaggctact ttggaaacag ctgttacaac agtagagtgt acaccgccac cagtaatttc
     3541 tttaatatat ccaggaacat cttctacttc aagtccgttg atcgtcacat ctgcaccaac
     3601 ttctttggcg agttccaatt tatcattatt aatgtctaca gcgataacat gagcgttgaa
     3661 gactttttta gcgtattgta cagcaaggtt tccgagtcca ccagcaccat agatagcgat
     3721 ccattgacct ggttccaagt gagcttcttt aatcgctttg tagcaagtaa cgccagcaca
     3781 agtgatagaa cttgcttgag ctggatcaag accttctgga acttttactg catagtctgc
     3841 tgttacaata cattgctcag ccataccacc gtcaacagag tagcctgcat tttttacggt
     3901 acggcagaga gtttcgcgac cggttgtaca atattcacac ataccacagc cttggaagaa
     3961 ccaagcaacg ctgacacggt caccaacttt tagactggta acaccaggtg cgatttctgt
     4021 aacaataccg attccttcgt gaccaagaac gcgaccagga accttaccaa aatcaccatt
     4081 ggcaacgtgg aggtcagtgt gacaaacacc acagtactca atttggacca aagcctcacc
     4141 agcttcgagt ggacgaagtt ccttttcgac aacgacaaca ccagtagatt ctggatttac
     4201 aacgactgct ttcataagca gacctcctgt tttaatattt tatgtacatt tttggatgtg
     4261 ttaatatagt tcttttatat tgttaagaat atcacaatgt gagcaaaaat gcaagagtag
     4321 aaaaggaggg acaaatgaat ataaaattga aaattatcac gtaattacta caaaattttc
     4381 aaaaaaatct atttacatgg aagcgttttc ttgataaact agtatcgtaa acgttagaga
     4441 aagaataaat gataaagatt tgtcttactt tatgtatttt tcgaccaaac aaagcagaaa
     4501 caaatctgaa tgttttctga aaacaagaaa aagtaagcgc tttctataac aaaacagaaa
     4561 aaatgtgaaa aaattaacaa tttctcttta caaataaaat aaaaaatagt agaataacat
     4621 tgtgaaaaag ttaacaaata gttagcgagt atatttggag gaacacaatg gctgataaaa
     4681 aagtagtatc accagaagaa aagttggtag aagcgcgcaa gcacgtcgat gagcttgttc
     4741 aaaaaggttt ggttgctctt gatgagttcc gtaaacttgg tcaagaagaa gtagactata
     4801 ttgtagcgaa agcttcggtt gcggcccttg ataaacacgg tgaattggca atgcacgcct
     4861 ttgaagaaac caagcgtggt gtattcgaag acaaggctac taagaacttg tttgcctgtg
     4921 agcacgttgt caataacatg cgccacacga aaactgttgg cgttatcgaa gaagatgaag
     4981 tgacaggttt gactttgatt gctgagccgg tcggtgttgt ttgtggtatc acaccaacaa
     5041 caaacccaac ttctacagca atctttaaat cattgattgc cttgaagaca cgtaatccaa
     5101 ttgtctttgc cttccaccca tctgcgcaag aatcttctgc tcatgcagct cgtgttgtct
     5161 atgaagcagc tgtggcagct ggtgctcctg aaaactgtat ccagtggatt acaaaaccat
     5221 ctatggaagc aacatctgaa ttgatgaaac atgatggtat tgcaacaatc cttgcaactg
     5281 gtggtaacgc aatggtgcgt gcagcttact cttgtggtaa acctgccctt ggtgtaggtg
     5341 caggtaacgt tccagcctat gttgaaaaat cagcaaacat ccgtcaggca gcacatgaca
     5401 tcgttatgtc taagtcattt gacaacggta tggtctgtgc gtcagaacaa gcagttatca
     5461 ttgataaaga agtttacgat gagtttgtag cagagttcaa atcttacaaa acttacttcg
     5521 ttaataagaa agaaaaagct cttcttgaag aatactgctt cggtgtgaaa gctaacagca
     5581 aaaactgtgc tgaaggtaaa ttgaacgcag acatcgttgg tcgcccagct gcatggatcg
     5641 ctgagcaggc cggcttctca gtaccagaag gtacaaacat cttggcagct gaggttgctg
     5701 aaatcggtga gaaagagcca ttgactcgtg agaaattgtc acctgttatt gccgtcttga
     5761 aagttgatgg tcgtgcagaa ggtcttgaag cagctcgcca aatggttgaa ttccacggtc
     5821 tcggtcactc tgcagctatt catacggaag acgcagaatt ggcgaaagag tttggtacaa
     5881 tcgtacgtgc tatccgtgtt atttggaact ctccatctac tttcggtggt atcggtgatg
     5941 tttacaacgc attcttgcca tcattgacac ttggttgtgg ttcttacgga cgcaactcaa
     6001 tcagtgataa cgtaagtgct atgaacttgc tcaacatcaa gaaagtagga agacgtagaa
     6061 ataatatgca atggtttaaa gttccttcta aaacatactt cgaacgtgac tctatccaat
     6121 atctccaaaa atgccgtgac gttgaacgtg tcatgatcgt tacagaccgt gccatggtag
     6181 aacttggatt cctagatcgt atcatcgaac aattggacct tcgtcgtaat aaagttgttt
     6241 accaaatctt ctcagacgtt gagccagatc cagacatcac aacggtttat aaaggtacag
     6301 aattgatgcg taccttcaaa ccagatacaa tcatcgcact cggtggtggt tcaccaatgg
     6361 atgctgccaa agttatgtgg ctcttctacg aacaaccaac agttgatttc catgacctag
     6421 ttcaaaaatt catggatatc cgtaaacgtg ccttcaagtt cccagaactt ggtaagaaat
     6481 ctaagtttat tgcgattcca actacatcag gtacaggttc agaagtaaca ccgttcgccg
     6541 taatctctga taaagcaaac aaccgtaaat acccaatcgc tgactactca ttgacaccaa
     6601 ctgtggcaat cgttgaccca gcactcgtat tgacagtacc tgcacacgtt acagcagata
     6661 ctggtatgga cgtattgact cacgctacag aagcatacgt ttcaacagta gcaaacgact
     6721 ttacagatgg tttagcactt caagctatca aactagtatt tgaaaacctt gaaagctcag
     6781 tgaagaatgc tgacttcgta tcacgtgaga aaatgcacaa cgcatcaact atggcaggta
     6841 tggccttcgc caacgcattc ctaggtattt ctcactcaat ggctcataag attggtggac
     6901 gtttccatac tgttcacggt cgtacaaacg ctatcttgct tccatacgtt atccgctaca
     6961 acggtactcg tccagctaaa acagctacat ggcctaagta caactactat aaagcagatg
     7021 aaaaatatca agacatcgct cgtcttctag gtttaccatg ttcaacacca gaagaagctg
     7081 ttgcagcata cgcacaagca gtttacgacc tcggtgaacg catcggtatc caaatgaact
     7141 tgaaagcaca aggtatcgac gagaaagaac tcaaagaaca ctctcgcgaa ttggctcttc
     7201 ttgcctacga agatcaatgt accccagcta acccacgtct agcaatggtt gaccacatgc
     7261 aagaaatcat cgaggatgcc tactacggtt acaaagaacg tccaggtcgt ttgaaataat
     7321 cctattccgt cgtctttcgt cgttagattt cctcggtgaa cttcagttct accttcgtca
     7381 atctgcctag aaaggcttag gactagaatt atttcggtcg ttcgccttgt ctcatttaga
     7441 aaattattcc ttgatggttt gggtagtttc gtcaatctgc ctagaaagac ttaggactag
     7501 aaaaagtcta ggtaggagta gcaaatcgta tcctactcag ttgaacggag tatgatttat
     7561 aggtaaattg cctccaaata tcgtaagaca atcctctatt gaaaaatagg ggattgtttg
     7621 tttagaaata atggtggaga ttctgtaaaa agcaaaagtg gttggaaagt tagggtttag
     7681 ccgagaaaaa gagacttttc tatctatctt tcacaatttt ctgtcaattt atggtagaat
     7741 agaaaaaata gattttttat gagggatacc atgacattag tatatcaatc aacacgcgat
     7801 gctaaaaata ctgtatcggc tagtcaggcg attttgcagg gcttggcgac cgacggtggt
     7861 ttgtttacac cgatttctat tccaacagtt gacttggatt tttctgtttt gaaagatgct
     7921 tcttatcaag aagttgctaa actgattttg tcagctttct tggatgattt tacggcagat
     7981 gaactggact actgtatcaa taacgcctac gacagcaagt ttgacacgcc agttattgcc
     8041 ccagtggtta agctaaaagg tcaatacaac ttggagcttt tccgtggctc aactattgct
     8101 tttaaggata tggcactgtc tatcctgcct tacttgatga cgactgcggc taaaaagcat
     8161 ggtttggaaa atgagattgt catcttgacc gcgacttcag gcgatacagg caaggcagct
     8221 atggctggct ttgcggatgt cccaggtacg caaataatcg tcttctaccc acgcgacggt
     8281 gtgtctaagg ttcaggagtt gcagatgacc acgcagacag gtgccaacac gcatgtggtg
     8341 gccattgacg gtaacttcga cgatgcccag acaaatgtca aacatatgtt caacgatgag
     8401 gctctccgtg ccaagttggc agctaagaaa ctccagtttt catctgccaa ctccatgaac
     8461 atcggccgct tggtgccaca gattgtttac tatgtctatg cctatgctca gctggttaag
     8521 actggcgaga ttgcggcggg tgacaaggtc aacttcaccg ttccgacagg taacttcggt
     8581 aacatcttgg cggcttatta cgccaaacag attggtctgc cagttggcaa gcttatctgt
     8641 gcgtccaacg acaacaatgt cctgactgac ttcttctcga caggcgttta cgacaagaac
     8701 cgtaccttcc gcgtgactac cagtccgtcc atggacatct tggtgtcctc taacttggag
     8761 cgcttgattt tccatctctt tggcaatgac gctggcaaaa cagccgatct catggaagct
     8821 ttgaacacag ctggtcagta cgacattcaa ggggctgacg cggatatcct ctctctcttt
     8881 gctgccgcct ttgcgacaga agaagaaacc gctgcggaaa tcaagcgtgt ctatgacgag
     8941 tcagactaca ttgaagatcc acatacggct gttgcttcag ctgtctataa acagtatgtg
     9001 gagcaaacag gggaccaaac tccgactgtg attgcttcta cagcaagtcc ttacaagttc
     9061 ccagtagttg cggttgaggc tgtgacaggc cagtcaggtt tgtctgactt tgaagccctt
     9121 gcaaaattgc atgagatttc aggtgtagcc ttgccaccag ctgtggatgg cttggaaaca
     9181 gcacctgttc gccacaatac cgttgttgca gctgacgata tgcaggctga agtagagcgc
     9241 tatttgggtg tttaatttcg atttatttta tgacaaactg ctcattttga acagtttgtt
     9301 ttctttttgc tgtttaaatt aaaatttaca gacaattcaa agaatggtat aataggagct
     9361 agtttgacac aaatttgtct aatcataaaa tgaaaaaata ggtgaattat ggcacaagaa
     9421 caggagaaaa tctccagaga aaa
//
LOCUS       DBNFCX010000085         9405 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.085, whole genome shotgun sequence.
ACCESSION   DBNFCX010000085 DBNFCX010000000
VERSION     DBNFCX010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 9405)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9405)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9405
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.085"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..368
                     /locus_tag="AC1PJC_001800"
     CDS             <1..368
                     /locus_tag="AC1PJC_001800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620778.1"
                     /translation="IVCKIFDESNIQYWNGNAFIEFKGNIKNKIGYKCIARKGTGYNL
                     LESEGQKAYDKLYRHRNRLAHNTLSYQRNLPTLLELENKEFGDSNYFIWFYILIVIDK
                     IMIKLFNEFNKATKRLLDI"
     gene            854..1552
                     /locus_tag="AC1PJC_001801"
     CDS             854..1552
                     /locus_tag="AC1PJC_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000698673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class B sortase"
                     /protein_id="HIP6620779.1"
                     /translation="MKFLKVSLAMLFLIGVLFLFFQALTGLEKTSIEQSPQDALKQKF
                     HQNPDVYAWVRIDGTRVDYPVAQHPTDDSYYLSHDLDGNETYYGAIFTELINTKTFED
                     SVTILYGHAMVDDSMFGSLDYFADWQFFQDHTVITIDTIDHRYEYDIVAAHPYTDDHL
                     FHNFQLGTKSGLDEYLDTLKERVDTFGGAYRQLAVDSDRDRVLILSTCDAISDNYRYV
                     LTAKLRRVTERIDT"
     gene            1549..2178
                     /locus_tag="AC1PJC_001802"
     CDS             1549..2178
                     /locus_tag="AC1PJC_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000590655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620780.1"
                     /translation="MIHEVKFSRFWRLSLGLLLLGIGQRLLYTGAISPWARDRGLPIF
                     LIVLSLVALGLGMALIFPLIIWFYKRHRSDKRLPQLILAYLLSAVVAGLFIGGIGQLL
                     YDHTSFAYYAVRTGVWTTSTIIQSILKLLLCFGLVSIHKNLPIRKRSNYLYLPLVGVF
                     LASIGIVLLNYFLPTIGSIVTSLIDAIVLISTLYYFIYLVKETPYETTS"
     gene            2162..>9405
                     /locus_tag="AC1PJC_001803"
     CDS             2162..>9405
                     /locus_tag="AC1PJC_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018378354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNRLRE domain-containing protein"
                     /protein_id="HIP6620781.1"
                     /translation="MKRLHKLMNWLLLVTLLISNSPIMYAQEISQAIEQSQTEQSYQE
                     AVTEATSQTVGSENANTEKPSSEQTEPSTKKEEGDAIQQPKVTDGTNPEEAALKAQYG
                     EPVAVSGQEQLFRVDDTHFVTYIGSDVKTYIDQDGVEVPVDLSLYSYHANGQHYYLPK
                     ESPVGVVLPSEVKEETPIDVIYKDEKISLYPLEKTYDQATVEQNAVLYNNVDGKTDIQ
                     YTVQSNGVKEEIVLAEWGGKNSFTYGLDASAYDVSLEDNQILVREKGKSTILFVLTAP
                     MMVDNAGESSSALTLDLKQTEKGYEVIVIASEDWLSSKERQYPVRIDPTITVPREKIL
                     DVVTSTVHGQYQGYAYGYVGYMTNLMIGVPEAKDIGRSRMYFKINYDFKKSIPSEARI
                     DSATFNLYQYTAPGSMATQFGAYRLKQDFDINNLNWNNSVGLEMEIAGANAISAKKIG
                     MHNFDIRETVNSWVQGLEPNYGLVIAATDEGADGGAFYTTEATADNAGQIGFTPDKAP
                     SLTINWSVPDPVDVNYPIGNTTINLRTMVKTDKKGQLQFQGVFADGLTTPGAQVDYNL
                     SDASKNYQGQNTASFSYKYPDSSPFDSVFEKGTTKYKDKLSNWQTQVPFTEPELNKVY
                     TIDAESKKDGQTSGKKSSDTFLIYKVTQYDTLPKIANYYGVPLKQIAFDNRIQDMLVV
                     KNNTLFIRNPRKNATKPYNPPTLTDDVKKDVDMLLMGRGLHCEFDFEPININTGNFYL
                     DRTDVTIRDVNDEFEITRFYNSKAAGINSLFGRGWSFAFNEQLSSDEDQNLYYTRTDG
                     SILKFTKDGDKYEAPAGYDLQLEVKTLETKQGDFGGEDKEDYEVKEYRITDTDNQEKV
                     FNFHGLLTSQTDEKGNKTAFDYNENFQLTKITSPTGLVFTLTYNDAGYIGAIQVPNGS
                     TLSYEYDENGNLITYTDATGVPTRYEYDDKGLMTAWYDGNGTKIIENEYDDQNRVVKQ
                     TDGTGAVSTLAYSDGQTVTTDANGNQTTYTYDDQYRTTGITYPDGTSISKTYDGDNRL
                     ASETNELGQTTSYTYDSNGNVLSETRFDGAVKTSTYDDKNHLLSVTDFGGEATKKRYD
                     DKGNLLQTTLPDGSSISYEVDGQGRIVSTTDAAGNTTSFAYEGANLVKITNPLGGVST
                     LTYNAHNQVTGITNPRGGTTTITYDAEGRKLSEKDADGVGTTHTFDQAGQVIGVTEGN
                     GNTTTFTYDAFGRKIGASNGEGGNYSYTYDGVGNQLSLTDAEGHTTTYTYDSRGRLLT
                     ETDALGQIITYQRDGIGRVVTRTNEAGNSSSFTYDDRHQAIKTITDALGQVTENTYDV
                     SGHLTDVTYPIGTKTQTTYDVMGRVLSYIDEAGQTVSYTYDSVGNKLTETKDDQTTSY
                     SYDVAGNVTGITYPDGTTVTYKLDAMGNILSMTDALGQETTYEYSPAGRLVATVNALG
                     HRTSYTYDGNGNQNSVTDAAGYTASSTFTGQNQVASVTDGLGNQTTFAYNQMEQLLEE
                     VDALGGKTSYTYDALGHPIAVVDANGHTTKMSYTPTAQLKEVVLPDGSSVTQEYDALD
                     RLVKQTHSSGLITEYTYDAADRLLTKKDNQDLNEVYTYDKVGNRLTLTNSLGEVTKYS
                     YDSDNQLTKVEYADGTSETFTYDVMGNVATSTDQEGKTKTYHYDANGNLTKTVDHLKR
                     ETSYSYDALDRVVTEKDPDGNTMTYEYDVLGNLSKVKDANGHESQYGYDANQQLVLYT
                     DPKGQTTAFKYDPLGRVVETLSPTGAKQTFTYDGLGNRLTETTGEGNTTTFTYDSLSR
                     LASMKRPTGGETTYTYDATGSLIKETDANGHSTSYVNDLYGRVTKRTLPNQAEYTYSY
                     DALGRLSKQTGPQGLAKSYTYDVAGNLTKETDQSDRSNSYTYDKVGRLLTAKNALDLE
                     TTYSYDEAGNLAKLTRPSGATTSFDYTTLDQLKTVTTPTGREITSTYDPVGQATKRVV
                     NGKRETSYTYDPNGNLLEETNPLGQVTKRTYDALNRLVSESDTAGQLTMYTYDHDNRV
                     TKVMDDAGATASLAYDANGNVTSVFSGSQRVTSYTYDLEDQLLTATQGTGDKASTSTY
                     TYDGVGNVTSITNGNGKVTTYKYDQLSNVVERMTAMGDKETYTYNIDNQLEKVTKADG
                     KTITYDYNKLDQLLKVDYSEKQDGQVLYTYDADGRRVSMSDLTGTTNYETNAEGAITG
                     VRQGDGSLIQYDYDDYGNISKMTYPDGRTVSYTYDELDRLTSVTDVKGKKTTYTYNEA
                     GDMTEVKRADGTRSFLTYDKARRVTELRHVDKKDKLISSYTYEYDDGNYITKESINQD
                     GKTVVHAYSYDTLGQVETMTVSDKAGKELSKLSYTYDLAGNKLTSTESIDGKEEKTTF
                     SYDDNNRLTKLENKDGITTYTYDKNGNRTASKKNDEKQDYIYDTENRLLAV"
BASE COUNT         2925 a         1902 c         2099 g         2479 t
ORIGIN      
        1 atattgtatg taaaattttc gatgaaagta atatccaata ttggaatggt aatgctttta
       61 tagaattcaa gggtaatata aagaataaaa ttggatataa gtgcattgct agaaagggaa
      121 caggttacaa tttattggag agtgaagggc agaaagcata cgataagtta taccgacata
      181 gaaatcgatt ggctcataat acactatcat atcaacgtaa tttgcctacg ttactagaat
      241 tagaaaataa agaatttggg gattctaact attttatttg gttctacata ttgatagtta
      301 tagataaaat tatgataaag ctatttaatg aatttaataa agctaccaaa aggctcctgg
      361 atatttgaat tatcacagct attagacagt tttgttataa atttagttcc ataatttaat
      421 cctagcctta aacctttccg tttcgttcca taatattggt aagacctatc accacaagtc
      481 gagtgtgttg ctctgctcgt aaaagcctag aaaccttgga acgaaaggga taatgaaaag
      541 ccttgattgt aaggcttttt gtattggggt ggggaagtat cagagtaact atttcagttg
      601 aagtagttga tgtgctggtg gattttagag ggatttattt ccgtagacgc aaggggggac
      661 atgagataag gagtatgagg ggatagatgt cccccccttt ttattactga tgagatgtct
      721 aggaaagtga tttataaaaa tgacagtaag tagacgctcg agtgatgccc tagctttata
      781 agttttagaa actttacata ttctttacaa ggattacgct attctgttat aatgattagt
      841 gtaaggagga ggcatgaagt ttctaaaagt tagcttagcg atgctgtttc tgattggggt
      901 attattccta ttttttcagg ccttaactgg tctggaaaaa actagtattg aacaatctcc
      961 gcaagatgct ctcaagcaaa aatttcatca aaatccagat gtttatgctt gggtgaggat
     1021 tgatgggaca cgggttgatt atcctgtcgc ccaacatcca acagatgata gttactatct
     1081 ctcgcatgat ttagatggaa atgaaactta ctatggagct atattcacgg agctgatcaa
     1141 tacgaaaacc tttgaggatt ccgtcacgat tctttatggc catgccatgg ttgatgactc
     1201 tatgtttggt tccttggact attttgcgga ttggcagttt ttccaagacc ataccgtgat
     1261 aacgattgat accatagacc atcgctatga gtatgacatc gtagctgcac atccttatac
     1321 agatgaccac ctctttcaca acttccagtt aggaacaaaa agtggattag acgaatacct
     1381 tgacacctta aaggaacgag tagatacttt tggcggcgcc taccgtcagc tagccgtaga
     1441 tagtgaccga gatagggtgt taattttatc aacttgtgac gcaataagcg ataactatcg
     1501 ctatgtactt actgctaaat taagaagggt tacagaaagg atagatacat gatacatgag
     1561 gtgaagtttt ctagattttg gagactgtct ctaggtctct tacttttggg aattggtcag
     1621 agactacttt atacaggagc tatttctccg tgggctaggg atagggggtt accaatcttc
     1681 ctgattgttt tgagcttagt tgctcttggt ttagggatgg cactaatctt tcctttgatt
     1741 atatggtttt ataaacgcca tcggtctgat aaacggctac cgcagcttat cttagcctat
     1801 cttcttagtg cagtagttgc gggcttattt atcggtggga ttggtcaact cttgtacgac
     1861 cataccagtt ttgcttacta tgctgttcgg acaggtgttt ggacaacgag taccattata
     1921 caaagtattc tcaagttact cttgtgcttt ggcttagtca gtattcataa aaacttaccc
     1981 attagaaaac gaagtaacta cctttatttg ccgctagtag gagtgttcct ggcctctatc
     2041 ggtatcgttc tgcttaacta ttttctacca actattggtt caatcgttac atcattgatt
     2101 gatgcgattg tgttgatttc tacactctat tattttatat acctcgtaaa ggagacgcct
     2161 tatgaaacga cttcataaat tgatgaactg gcttttgctg gtgaccttgt tgatttcgaa
     2221 tagtcccatt atgtatgcgc aagagatttc tcaagccatt gagcagagcc agacggaaca
     2281 atcttatcaa gaggctgtca cggaagcaac aagccaaaca gttggttcgg agaatgccaa
     2341 tactgaaaaa ccatcttctg aacagacaga gccgtcgact aaaaaagagg aaggagatgc
     2401 catccaacaa cctaaagtga cggatgggac taatcctgaa gaagcagctt taaaagcaca
     2461 atatggagag ccggttgctg tcagtgggca ggaacagctt tttcgtgttg acgacactca
     2521 tttcgtaacc tacattggta gtgatgtgaa gacctacatc gatcaagatg gagtagaagt
     2581 tccggttgat ttatctcttt attcctatca tgctaatggg caacactatt atcttcctaa
     2641 agagtctcca gtaggtgtcg ttcttccaag tgaagtcaag gaagaaacac caattgatgt
     2701 gatttataag gacgagaaga tttccctata cccattagag aaaacatatg accaagccac
     2761 tgttgaacaa aatgcagttt tgtataataa cgttgatggt aagacagata ttcaatatac
     2821 tgtccaatct aacggggtta aggaagaaat cgtcttggct gagtgggggg gaaagaatag
     2881 ctttacctat ggactagatg cttccgctta tgatgtctct ctagaagata atcaaatcct
     2941 tgtcagagaa aaagggaagt caacgattct ctttgtttta acagctccta tgatggtgga
     3001 taatgctgga gaatccagtt cagcactgac actggactta aaacaaactg aaaaagggta
     3061 tgaagtcatt gtgatagcta gtgaagactg gctatcttct aaagaacgtc aatatccagt
     3121 tcgtattgac ccgaccatca ctgttcctcg tgagaaaatc ctagatgtcg ttacctcaac
     3181 cgtacatggt caataccaag gttatgccta cggttatgtt ggctacatga caaacttgat
     3241 gataggggtg ccagaagcta aagatatcgg acgttctcgg atgtatttca aaatcaacta
     3301 tgatttcaag aaaagtatcc cttccgaggc acggattgac agtgcgacct ttaaccttta
     3361 tcaatatact gccccaggct ctatggcgac tcaatttggt gcctatagac tgaaacaaga
     3421 ctttgatatc aataatttaa attggaataa ttctgtcggt ttagagatgg agattgcagg
     3481 agccaatgcc atcagtgcca agaaaatcgg tatgcacaac tttgatatcc gtgagacggt
     3541 taattcttgg gttcaaggtt tagaaccgaa ctacggactg gttattgcag ctacagatga
     3601 aggtgcagat ggtggagctt tctatacgac agaagctacg gcagataatg caggtcagat
     3661 tggttttacc ccagataagg caccttctct aacaatcaat tggtctgtgc cagatcctgt
     3721 agatgttaac tacccaatcg ggaataccac tattaacctt cggacgatgg tgaagactga
     3781 taagaaaggt caacttcagt tccaaggtgt ttttgcggat ggtttaacca caccaggtgc
     3841 acaggtagat tataacctga gtgacgcatc aaaaaattat caagggcaaa ataccgcaag
     3901 tttctcctac aagtatccag atagtagtcc atttgattca gtatttgaaa aaggaacaac
     3961 caaatataag gacaaacttt ccaactggca aacccaggta ccatttactg aacctgagtt
     4021 aaataaggtg tataccatcg atgctgaaag taaaaaggat ggtcaaacca gtggtaagaa
     4081 atcaagtgat accttcctaa tttataaggt tacccaatat gatacgctac ctaaaatagc
     4141 caattattat ggtgtgccac tgaaacaaat tgcttttgac aaccgaattc aggatatgtt
     4201 agtggtgaaa aataacaccc tttttatccg taatccgaga aagaatgcga ctaagccgta
     4261 caatccgccc actctaacag acgatgtcaa aaaagatgtc gacatgcttt tgatggggcg
     4321 tggcctgcac tgtgagtttg attttgaacc gattaacatc aatacaggga atttctattt
     4381 ggatcggacc gatgtaacga ttcgtgatgt gaatgatgag tttgaaatta ctcgcttcta
     4441 taactctaag gccgctggta ttaatagtct ttttggtcgt ggttggtcct ttgcctttaa
     4501 tgaacaactt tctagtgatg aggaccagaa tctctattat acacgtaccg atggttctat
     4561 tttgaaattc actaaagatg gggataaata cgaagcacct gctggttatg atttacagct
     4621 tgaggtaaaa acacttgaga cgaagcaggg agatttcggt ggagaagaca aagaagatta
     4681 cgaggtcaag gagtaccgta tcacggatac ggataaccaa gaaaaagtct tcaatttcca
     4741 tggtcttctg accagtcaga cagacgaaaa aggcaacaag acagcctttg actataatga
     4801 gaatttccaa ctaacgaaaa ttacctcacc tacgggtctt gtctttacct tgacctataa
     4861 tgatgcaggt tatattggcg ctattcaagt gccaaacgga tctacccttt catatgaata
     4921 tgatgagaat ggtaacctca taacctacac agatgcgact ggagttccaa ctcgttatga
     4981 gtacgatgat aaggggctca tgacagcttg gtatgatggt aatggtacta agattattga
     5041 gaatgaatac gatgaccaaa atcgtgttgt caaacagacc gatggcacag gagctgtttc
     5101 aactctagct tatagtgatg gtcagactgt tacaacggat gctaatggca atcaaacaac
     5161 ctatacctat gatgaccagt atcgcacaac aggtattact tatccagatg gcaccagcat
     5221 ttctaaaacc tatgatggag acaaccgctt agctagtgag accaatgaac ttggtcaaac
     5281 gactagctac acttatgatt cgaacggaaa tgtcttaagc gagacacgtt ttgatggtgc
     5341 agtgaagacg tctacttatg atgacaagaa tcatctctta tctgtaacag attttggcgg
     5401 tgaagcaacc aagaagcgct atgatgataa ggggaatctt cttcaaacca ccttaccaga
     5461 tggttcaagc atctcttatg aggtggatgg acaaggacgt attgtatcca caactgatgc
     5521 ggcaggtaac acgacgagct ttgcttatga aggggctaat cttgttaaga ttaccaaccc
     5581 acttggtggt gtatctaccc ttacttataa tgcccataat caagtaactg gtatcaccaa
     5641 tcctcgtgga ggaactacca ccattaccta cgatgcagaa ggtcgtaagc tcagtgaaaa
     5701 ggatgcggat ggtgttggaa cgacccatac ctttgaccag gcgggccaag taatcggtgt
     5761 gaccgaagga aatggcaaca ccactacctt tacctacgat gcctttggcc gtaagattgg
     5821 cgcttctaat ggagaaggag gcaactacag ctatacctat gatggtgttg ggaatcaact
     5881 atctctgacc gatgcggaag gccatacgac aacttatacc tatgacagtc gtggccgtct
     5941 cttgacagaa acagatgcac ttggacaaat catcacctac caacgtgatg gaatcggtcg
     6001 cgtcgttaca cgaacgaatg aagctggaaa tagcagtagc tttacctatg atgaccgaca
     6061 tcaagctatt aagacgatta cggatgcttt agggcaggta acagagaata cctatgatgt
     6121 ttctggccac ttaacggatg tgacctatcc aatcggtacg aaaacacaga ctacctatga
     6181 tgttatgggg agagtcttat cttatataga tgaagcaggt caaacggttt cttataccta
     6241 cgattctgta gggaataaac tgacagagac taaggacgat cagacgacta gctatagtta
     6301 tgatgtggca gggaatgtga ctggtatcac gtacccagat ggtacaacag ttacttataa
     6361 actagatgct atgggcaaca tcttgtctat gacagatgca cttggacaag aaacgactta
     6421 tgaatatagt ccggcaggac gactggtcgc gacggtcaat gcccttggcc atcgaacaag
     6481 ttacacttat gacggtaacg gtaaccaaaa tagcgtgacc gatgcggcag gctatacagc
     6541 ttctagcacc ttcacagggc aaaaccaagt cgcaagtgtc acagatggat taggcaatca
     6601 aacaaccttt gcttataacc agatggagca gttgctagaa gaggttgatg ctctaggagg
     6661 gaagacgagc tacacctacg atgccttggg acatcctatc gctgtcgtgg atgctaatgg
     6721 tcataccact aagatgagct atacaccaac tgctcaactg aaagaagtgg ttctccctga
     6781 tggatcaagt gtcacacaag agtacgatgc cctagaccgt ctcgtcaaac aaactcattc
     6841 gagtggtctt atcacagagt atacctatga tgcggcagac cgccttctga caaagaaaga
     6901 caatcaggat ctcaacgagg tttacaccta tgataaggtt gggaatcgac tgactttgac
     6961 aaatagtctt ggggaagtaa ccaagtacag ctatgatagc gacaatcagc tcactaaggt
     7021 agagtatgcg gatgggacta gcgagacctt tacttatgat gtcatgggca atgttgcgac
     7081 atcaacagac caagaaggta agactaagac ctaccattat gatgccaatg gcaacttgac
     7141 aaagactgtc gatcacctca agcgtgagac atcttacagc tatgatgcgc tggacagagt
     7201 tgtaacagaa aaagaccccg acgggaatac catgacctat gagtacgacg tactcggaaa
     7261 tctttctaaa gtgaaagatg ccaatggtca cgaaagtcag tacggctatg atgccaatca
     7321 gcaactggtt ctctacacgg atccaaaggg tcagaccaca gccttcaaat atgacccgct
     7381 gggacgtgtg gtggagactc tttccccaac aggtgccaaa caaaccttca cctatgatgg
     7441 gctgggcaac cgcctaacag aaactacagg cgaaggcaat acaactacct ttacctacga
     7501 cagtttgagc cgtctagcaa gcatgaaacg ccctacaggt ggcgagacga catataccta
     7561 tgatgcgaca ggtagtctga ttaaggagac agatgccaac ggacatagta cgagctatgt
     7621 caacgacctc tatggtcgtg tgaccaagcg gactcttcca aaccaagcag agtataccta
     7681 cagctacgac gccctgggac gcttgtccaa acaaactggt ccacaaggtt tggctaagag
     7741 ctatacctac gatgtggcgg gtaacctgac caaggaaacg gaccagtcag atcgaagcaa
     7801 tagctatacc tatgacaagg tcggtcgtct cttaacagcc aagaatgccc tagaccttga
     7861 aaccacttat agttatgatg aggcaggaaa ccttgccaag ttgacgcgtc cgtcaggcgc
     7921 aactactagc tttgattaca caacccttga ccaactcaag acagttacaa caccaacagg
     7981 ccgtgaaatc acctcaacct acgatcctgt tggccaggct actaagcgag tggttaatgg
     8041 aaaacgtgag acaagctaca cctatgatcc gaatggtaat cttttagaag agactaatcc
     8101 tttaggtcaa gtcaccaagc ggacctacga cgcccttaac cgtcttgtta gtgagagtga
     8161 tactgcaggt caactgacca tgtataccta tgaccacgat aaccgtgtga cgaaggtaat
     8221 ggatgacgca ggagcgacag cctccttggc ttacgatgcc aatggtaatg tgacaagtgt
     8281 attttcaggt agtcagcgtg tgacaagcta cacctacgac cttgaggacc agctactgac
     8341 agctacacaa ggcacaggcg acaaagcctc aacatcaacc tatacttatg atggtgtggg
     8401 caatgtcacc tctatcacca atggcaacgg taaagtcaca acttacaaat acgaccaact
     8461 ctccaacgta gtggaacgca tgaccgcgat gggggataag gaaacttata cctataatat
     8521 cgataaccaa cttgagaaag tcaccaaggc tgatggtaaa accattacct acgactacaa
     8581 caagctcgat caactcctca aagtagacta ctctgagaaa caagatggcc aagtcctcta
     8641 tacctatgat gcggatggtc gccgtgtatc catgagtgat ctgacaggta cgaccaacta
     8701 tgagaccaac gcagaaggcg caatcaccgg tgttcgtcaa ggggatggta gtctcatcca
     8761 gtatgactac gatgactatg gcaacatctc taagatgacc tacccagatg gtcgtaccgt
     8821 ttcatacacc tatgatgagc tggatcgtct aacttctgtg acagatgtta agggtaagaa
     8881 gacaacctat acctataatg aagcaggcga tatgacagaa gtcaagcgtg cagatggtac
     8941 gaggagcttc ttgacctacg acaaggctcg tcgtgtgacg gagcttcgcc atgtcgataa
     9001 gaaggataag ttgatttcta gttataccta tgagtatgat gatggcaact atatcactaa
     9061 ggagagcatt aaccaagatg gtaaaaccgt agttcacgct tattcctacg atacactagg
     9121 tcaagtggag acgatgacgg tatcagacaa agcaggaaaa gaactgtcta aactctctta
     9181 cacttatgat ttagcgggga ataaactaac cagcacggaa agtatagatg gtaaggaaga
     9241 aaaaacgacc ttcagctatg atgacaacaa tcgcctgacc aaattggaga ataaggacgg
     9301 cattaccact tatacttacg acaaaaacgg taaccgtact gcgtctaaga aaaatgatga
     9361 gaagcaagat tatatctacg acacggagaa ccgtctcctt gcggt
//
LOCUS       DBNFCX010000086         9212 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.086, whole genome shotgun sequence.
ACCESSION   DBNFCX010000086 DBNFCX010000000
VERSION     DBNFCX010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 9212)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9212)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9212
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.086"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..997
                     /locus_tag="AC1PJC_001804"
     CDS             <1..997
                     /locus_tag="AC1PJC_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HIP6620782.1"
                     /translation="LPMILTGLLYYLLNPMVDWMEKHKISRTVGISILFVLISLLIIW
                     GLAVAIPSIQEQVTSFAQNLPSNIQKIEGQVTGLLQDQRFEQFRPTALEMLNKVNDQI
                     VAYAQKFSSSAVNWASNLISTASQIIVAILIMPFILFYLLRDGQYLNKHITQYLPTKW
                     REPIGTVLSDVNGQLSNYVRGQVTVAIIVALMFSVMFSIIGLSYPITLGVMAGFLNLI
                     PYLGSFLAMIPAVILGLIAGPIMLIKVLVVFMIEQTIEGRFVTPLIIGSSLSIHPITI
                     LFVLLTAGQMYGVLGVLLGIPIYASIKVLVKAAFEWYKAHSSLYEDEENEVVNEQ"
     gene            987..2216
                     /locus_tag="AC1PJC_001805"
     CDS             987..2216
                     /locus_tag="AC1PJC_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620783.1"
                     /translation="MNNSEKMLVCLDQQDLDKADKYFKRALVQDDSETLLSLAAYLEG
                     IGFFPQARQIYEQVKEEFPEVLINLAQIAFEDGLVEESFGYLEEISEDSSVYVEALLV
                     KADLYQAEGLSDVAREKLLEASHLSDEPIILFGLAELDMELELFNEAISYYAQLDNRE
                     IYELTGVSTYQRIGIAYASLGKFEAAIEFLEKAVELEYDDQTVFELAALLFEREEYQK
                     ANLYFKQLDTINPDFEGYEYAYAQSLHAEHKIDDALAMTQKGLAKNDFDANLLLQASQ
                     YAYELHDEAGAEDYLLRAKEVADDSNELALRLSNLYLEQERFEEVVALFDEEVDNVLA
                     RWNMAKAYQALERDDEASELYDELAGELAENPEFLADYVAVLRQLGRLDEAKEQASRY
                     IQLVPDDLAMQEFLNEE"
     gene            2220..2936
                     /gene="budA"
                     /locus_tag="AC1PJC_001806"
     CDS             2220..2936
                     /gene="budA"
                     /locus_tag="AC1PJC_001806"
                     /EC_number="4.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019322637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047605 - acetolactate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0045151 - acetoin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate decarboxylase"
                     /protein_id="HIP6620784.1"
                     /translation="MQVNRLFQYNTLGALMAGLYGGSLTVGELLEHGDLGLGTLDSID
                     GELIVLDGKAYQAKGAGEKPEVVEVPADMKVPYAAVIFHEAEVIFKQRFEMTSDELHQ
                     RIESYYDGENLFRSIKIKGTFSHMHVRMIPKSASDVRFAEVASRQPEYTAENISGTIV
                     GIWTPEIFHGVSVAGYHLHFISDDLTFGGHVMDYVISEGMVEVGPVDQLDQRFPVQDR
                     QYLFAKFNAKQVREDIDKAE"
     gene            complement(2962..4620)
                     /locus_tag="AC1PJC_001807"
     CDS             complement(2962..4620)
                     /locus_tag="AC1PJC_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011836787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990112 - RQC complex [Evidence IEA];
                     GO_function: GO:0001968 - fibronectin binding [Evidence
                     IEA];
                     GO_process: GO:0072344 - rescue of stalled ribosome
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rqc2 family fibronectin-binding protein"
                     /protein_id="HIP6620785.1"
                     /translation="MSFDGFFLHHMTAELRANLEGGRIQKINQPFEQEIVLNIRSNRQ
                     SHKLLLSAHSVFGRVQLTQTEFTNPKVPNTFTMILRKYLQGAIIEEIRQLDNDRILEF
                     SVSNKDEIGDHIQATLIVEIMGKHSNIILVDKSEQKIIEAIKHVGFSQNSYRTILPGS
                     TYIRPPETHSLNPYTVSDEKLFEILSTQELSPKNLQQVFQGLGRDTASELASHLQTDR
                     LKNFRAFFDQATQPSLTDKSYAALPFANSPEKQPHFESLSSLLDFYYQDKAERDRVAQ
                     QANELIKRVASELEKNRKKLVKQEQELADTETAELVRQKGELLTTYLHQVPNDQSSVR
                     LDNYYTGEELEIELDVALTPSQNAQRYFKKYQKLKEAVKHLTSLIEETKATIVYLESV
                     DTMLGQASLAEIDEIREELIETGYLKRRHREKIHKRQKPERYLATDGKTIILVGKNNL
                     QNDELTFKMAKKGELWFHAKDIPGSHVVITDNLDPSDEVKTDAAELAAYFSKARHSNL
                     VQVDMIEAKKLHKPTGGKPGFVTYRGQKTLRVTPTEDKIKSMKI"
     gene            5451..6449
                     /gene="trpX"
                     /locus_tag="AC1PJC_001808"
     CDS             5451..6449
                     /gene="trpX"
                     /locus_tag="AC1PJC_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009730063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan ABC transporter substrate-binding
                     protein"
                     /protein_id="HIP6620786.1"
                     /translation="MKNKNLLATIVALTVMVVAALFMTQKEQSNSSTSTEKVKIGVLQ
                     FVTHDSLDEIYKGIKAGLEEGGHTTTDNLEIDFMNAEGDQSQVQTMSKKLVDNGNELL
                     IGIATPAAQGLANATTELPIIMGAVTDPVGANLVTDLKNPGGNITGVADQTPVADAVS
                     LIKEITPDAKTIGVLYSSNEDNSKIQVAEFKAAAEEAGYTVLEYAVASSNEIAATVEV
                     ASSKADVLFTPVDNTVASAFSTVVSVANKTKTPIFTSVEDMVEGGGIASVTLSQYDLG
                     VATGKMAAKILDGATPADTPVQIFNEGTVVVNQKVAKELGITLSDDVISKASKVIE"
     gene            6472..7338
                     /locus_tag="AC1PJC_001809"
     CDS             6472..7338
                     /locus_tag="AC1PJC_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002902146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIP6620787.1"
                     /translation="MIVSTVSQALLWAVLGLGIFVTFRILNFPDMTTEGSFPLGGAVA
                     VTLLTQGVHPILATLAAVLVGCLAGFVTGLLYTKGKIPTLLAGILVMSSCHSVILFIM
                     GRANLGLLNTKRLQDFLPFSEQINGLLLGLGSLAVVIGALMFFLYTRLGQAFIATGDN
                     PDMARSFGINTSRMELLGLVLSNGIIALAGALIAQQEGYADVSRGIGVIVVGMASLII
                     GEVIYGNLTMLERFLAIVVGAIFYQFLILVVISLGINTSYLRIFSAMILATCLMVPEL
                     KNKLLKGASLSR"
     gene            7335..8093
                     /locus_tag="AC1PJC_001810"
     CDS             7335..8093
                     /locus_tag="AC1PJC_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000125420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6620788.1"
                     /translation="MKAIVELKNTTKVVTNGFDEERVILDNVNLTIYQGDFITILGGN
                     GAGKSTLFNVIAGTLPLTSGSVHILGEDVTNWPAEKRAKYLSRVFQDPKMGTAPRMTV
                     AENLLIAKYRGEGRGLVPRRLAQQTEEFAQLLPRVGNGLEKHLDTPAGLLSGGQRQAL
                     SLLMASLKQPELLLLDEHTAALDPKTSQSLMQLTDELIETKGMTALMVTHQMEDALRH
                     GNRLIVMKNGQIIQDQTAEEKSKMKLEDYYKLFD"
     gene            8276..8761
                     /locus_tag="AC1PJC_001811"
     CDS             8276..8761
                     /locus_tag="AC1PJC_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl-tRNA synthetase associated
                     domain-containing protein"
                     /protein_id="HIP6620789.1"
                     /translation="MDKLVFESLADLGMDYTIVEHPPALTTEEADRYIEGLEGVRTKS
                     MFLTNKKKTAFYLLIMDDQKQLDMDQFRDLVGANRIRMASSESLMEKMHLPAGAVSVF
                     GLLHNVDKDIQVFFDKEILSEPILTFHPNVNTKTIFVKTEDVLRFVEEIGFSATIVDL
                     G"
     gene            8767..9171
                     /locus_tag="AC1PJC_001812"
     CDS             8767..9171
                     /locus_tag="AC1PJC_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HIP6620790.1"
                     /translation="MRKCLAICSLLCCLFLVGCRTGAAYQAEIEPMEQSELYTEKEIE
                     AAILVVQDYFDHHFNSCKLLTIGYSGDNEKEFDEWAEHYGAEEAIILTSSFKVAAEGA
                     EPTLEPNSTHTDWKWILVRNVGGKWEHKGHGY"
BASE COUNT         2498 a         1751 c         2205 g         2758 t
ORIGIN      
        1 gttaccgatg attttaacag gtcttttgta ttacctatta aatccgatgg ttgactggat
       61 ggaaaagcat aaaatttctc gtacagttgg tatttccatt ctctttgttt taatcagtct
      121 tctcattatc tggggactgg cggtggcaat tccgagtatt caagagcaag tgacatcttt
      181 tgcgcaaaat cttccttcga atatccagaa aatcgaagga caggtaactg gtctcctaca
      241 ggatcagcgc tttgaacaat ttagaccaac agctctggag atgttaaata aggtcaatga
      301 tcagatcgtt gcctatgctc agaagttttc ttcaagcgct gtgaactggg caagtaattt
      361 gatttcaacc gcttcacaga ttattgttgc tattttgatt atgcccttta ttctctttta
      421 tctattacgg gatggtcagt atttgaataa acacatcacc caatatctac caaccaagtg
      481 gagagaaccg attggaacag tgctatcaga tgtgaatggg caattgtcaa actatgttcg
      541 tggtcaggtg accgttgcga ttattgttgc cctgatgttc tcagtgatgt tctcaatcat
      601 tggtcttagc tatccaataa ctttgggggt gatggctggt ttcctcaatc taattccgta
      661 tttgggttct ttcttggcca tgattccagc tgttatttta ggattgattg ctggtccaat
      721 catgctgata aaggttttag tagtctttat gattgagcag actatagaag gtcgttttgt
      781 gacaccattg attatcggaa gctccctaag tattcatccg attaccattt tatttgtatt
      841 attgacagct ggtcagatgt acggtgtcct aggagttctt ctgggaattc caatatatgc
      901 ctctattaag gttttagtga aagcggcatt tgaatggtac aaggcacaca gtagtttgta
      961 tgaagatgaa gaaaatgagg ttgtgaatga acaatagtga aaaaatgttg gtttgtttgg
     1021 atcaacagga tttagacaag gcagataagt atttcaagcg cgccttggta caagatgata
     1081 gcgaaacgct tttgtccttg gcagcctact tagaaggcat tggttttttc ccacaggcta
     1141 gacaaatcta tgaacaggtt aaagaagaat ttcccgaagt actgatcaat cttgcccaaa
     1201 tagcatttga agatggcttg gttgaagaat ctttcggata cttggaggaa atttcggaag
     1261 acagttctgt ctatgtggaa gccttattgg ttaaggcgga cctgtatcag gcagaaggct
     1321 tgtcggatgt ggcgcgtgaa aaattgttag aagcaagtca cttatcagat gaacccatca
     1381 tcctctttgg cttagcagaa ttggatatgg aactggagct ttttaatgag gctatttcct
     1441 actatgccca gctggataat cgtgaaatct acgaattaac gggagtttct acctatcagc
     1501 gaattggcat tgcctatgca agtttaggga aatttgaagc ggccattgaa tttttggaaa
     1561 aagctgttga gttggaatac gatgaccaga cggtttttga gttagcagct ctgctatttg
     1621 aacgagaaga ataccaaaag gccaatctct atttcaagca gttggatacc atcaatcctg
     1681 attttgaggg ctatgaatat gcctatgctc agtcgcttca tgccgagcat aagattgatg
     1741 atgccttggc tatgactcaa aaaggcctgg ctaaaaatga ctttgatgcc aatctcttgc
     1801 ttcaggcttc acagtatgcc tatgaattgc atgacgaggc gggggcggaa gattatcttc
     1861 tacgggcaaa agaggtagca gatgatagta acgaactagc tctgcgcttg tccaatctgt
     1921 atcttgagca ggaacgattt gaagaggttg tggctttatt tgatgaagag gtagataacg
     1981 ttctagctcg ctggaatatg gccaaagcct atcaagctct agaaagagat gatgaagcga
     2041 gtgagcttta cgatgaattg gctggagaat tggctgagaa tcctgaattt ttggctgatt
     2101 acgtagcggt tttacgtcaa cttggtcgtt tggatgaggc aaaagagcaa gctagtcgtt
     2161 atatccaatt ggtgccagac gatttagcca tgcaagaatt tttgaatgaa gagtaggtta
     2221 tgcaagtaaa tcgattattt caatacaata ccttaggtgc cttaatggct ggactgtatg
     2281 gcggctcctt gacggttggc gaattgttgg aacatggtga tttgggtttg ggaaccctgg
     2341 attccattga tggcgagctg attgtcttgg atggaaaggc ttatcaggcc aagggagcag
     2401 gggaaaaacc agaagtggtt gaagttccag ctgatatgaa ggttccctat gcggcggtta
     2461 ttttccatga ggcagaagtg attttcaaac aacgctttga aatgactagc gatgaattgc
     2521 atcagcggat tgaatcctat tatgatgggg aaaatctttt tcgttccatc aaaatcaaag
     2581 ggacattttc gcatatgcac gtgcgcatga ttcctaaatc ggcttctgat gtccgttttg
     2641 cggaggtggc aagtcgccag cctgagtata ccgctgagaa tatttcaggt accattgttg
     2701 gtatttggac accagaaatt tttcacgggg tcagtgtggc tggctatcat ttgcacttta
     2761 tctcggatga tttgacattt ggcgggcatg tcatggatta tgttatctca gaaggaatgg
     2821 ttgaagtagg gccagtcgat caactagatc aacgcttccc agtccaagac cgccagtatc
     2881 tttttgctaa gttcaacgct aagcaagtta gagaagatat tgataaggcg gagtaggttt
     2941 caatatagaa aaatccatga attagatttt catggatttt attttgtctt cagttggggt
     3001 gacacggagg gttttctgac cgcggtaggt cacaaaacca ggcttgccac ctgttggctt
     3061 atggagtttt tttgcttcaa tcatatcgac ttgaaccaag ttagaatgcc ttgccttgga
     3121 gaaataggcg gctaactccg ccgcatcggt cttgacctcg tcgcttgggt ccaagttgtc
     3181 tgtgatgacc acgtgactgc ctggaatgtc tttggcatgg aaccagagtt cgcctttttt
     3241 ggccattttg aaggtcaact catcattttg taggttattt ttcccgacca gaataatggt
     3301 tttcccgtcc gtcgccaagt atcgctcagg tttctgacgc ttatggattt tctcacgatg
     3361 acggcgtttg aggtagcctg tttcaatcaa ttcctcacgg atttcatcga tttctgccag
     3421 actagcctgt cccagcatgg tgtcaacgga ctccagatag acaatggttg ccttggtttc
     3481 ctcaatcaag ctggtcaggt gcttgaccgc ctccttgagt ttctggtact ttttgaaata
     3541 acgttgggca ttctggctag gagtaagagc cacgtccaac tcaatctcca gttcctcgcc
     3601 cgtatagtag ttgtctaacc gcacactcga ctggtcattt ggcacttgat gcagataggt
     3661 ggtcaggagc tcgccctttt gccgcaccaa ctccgccgtc tccgtatccg ccaattcctg
     3721 ctcctgcttg accagtttct tgcgattctt ctccaactca ctggccaccc gcttgatcag
     3781 ctcattggcc tgctgggcca cccggtcccg ctccgccttg tcctgatagt agaagtccag
     3841 cagactgctc aggctctcaa agtgtggctg tttttcaggg ctattggcaa atggcagagc
     3901 agcataggat ttgtctgtca ggctaggctg agttgcctgg tcaaaaaagg cacggaagtt
     3961 cttcaggcgg tctgtctgca agtgactggc cagttcagaa gccgtatccc gacccaaacc
     4021 ttgaaagacc tgttggagat tttttggact cagttcctga gtcgataaga tttcaaacaa
     4081 tttctcatca gacaccgtat aaggattgag agaatgcgtc tccggtggac gaatgtaggt
     4141 tgagcctggc aagatggttc ggtaggaatt ttgcgagaaa ccaacgtgct tgatagcctc
     4201 aataatcttc tgttcagact tatccaccaa gatgatattg ctgtgcttgc ccatgatttc
     4261 cacaatcaag gtagcttgga tatggtcgcc aatctcgtcc ttgttggaca ccgaaaattc
     4321 taagatgcgg tcattgtcca actgacgaat ttcctcgata atggctccct gcaagtattt
     4381 ccgcagaatc atggtaaagg tattgggtac cttaggatta gtaaattctg tttgagtaag
     4441 ctggacacgg ccaaaaacgg aatgtgcaga caagagcaat ttatggctct gacggttgct
     4501 tcggatgttc agaacaattt cctgttcaaa gggctggttg attttctgaa tccgcccacc
     4561 ttctaaattg gcccttaact cagccgtcat gtgatgtaaa aaaaatccgt caaaagacat
     4621 ggttttcctc tttctaatag ctataactca gtctagtata tcatattttg atgttttttg
     4681 atgagactga taatccctac taacataaaa agttttcaga aaatttaatc aaaaaccttg
     4741 acaaagagtg atggatgccg tataatcatc tgtaatcaga agaagtagta aagcagaagt
     4801 cttcagggag cctgtggtgc tgggaacagg tggcggagtt ttatgaaatg ggctgatgtg
     4861 catttatgtc tattttatga cgtcgttagt cggtcttgcc gtaccaccag tactgccttc
     4921 acccgactgt ctagtcctaa aatgccctaa attcacaagg attgtttggt atagcatact
     4981 ttgcgtagac tgttttggct gagtacgagg caggtcgacg cagcttatac tggcggtata
     5041 gcaaggagag ttaacgaagt aactagccaa aacagtcatg caaatgaact taaaacaatg
     5101 atagttcggt ccgcacacct tacagtgcaa ctccttgtta gaggagatga gatatgggag
     5161 gattctagac aattcccata agtgaggtgg caccgtgtca ttgacgccct cgcaggttgg
     5221 tttttcctgc gggggctttt tcctttagtc attcagttta tcttttatta cgtcgttaac
     5281 tcgctttgcc gtactttagt actgcctgca gctcgttgcc tagtactaaa agcaaactga
     5341 aagactatta tctaaatgag gtaatcatga tgaaacgatg gcgatggtgg gataatatat
     5401 tgatgacgta gaaattgtat attgtgtatt ttacgaggag aatgaatatg ttgaaaaata
     5461 aaaatttact tgctacaatt gttgccctta ctgttatggt agttgctgct ttgtttatga
     5521 cacagaaaga gcagagcaat tcatctacat caacggagaa agttaagatt ggagttcttc
     5581 agtttgtaac ccatgattca ctagatgaga tttataaggg aatcaaagca ggacttgaag
     5641 aaggtggtca taccacaacg gataatttag aaattgattt tatgaatgct gagggtgatc
     5701 aatcccaagt tcaaaccatg agtaaaaaat tggtggacaa tggcaatgaa ttattgattg
     5761 gtatcgcaac acctgctgca cagggattag caaacgctac gacagaatta cctattatca
     5821 tgggagctgt gacagatcca gtcggagcca acctggtgac ggatttgaaa aatcctggtg
     5881 gaaatatcac aggggtagct gaccaaacac cagtagcaga cgcagtttct ctcattaaag
     5941 aaattacacc agacgctaaa actatcggtg tcctctattc ttcaaatgag gacaattcaa
     6001 aaattcaagt agcggaattt aaggcagcag cagaagaggc tggctatact gttcttgaat
     6061 atgcagttgc ttctagtaat gaaattgcag cgacagtaga ggtcgcaagt agtaaagcag
     6121 atgttctctt tacaccagta gacaacacag ttgcctcagc attttcaact gtcgtatctg
     6181 tggcaaataa aaccaaaact ccgattttca ccagcgtaga agatatggta gaaggcggag
     6241 gtatcgcatc tgttaccctt agccaatatg acttgggtgt ggcaactggt aagatggctg
     6301 cgaaaattct tgatggtgcc actccagcgg atacacctgt acaaatcttt aacgagggta
     6361 ccgttgttgt caaccaaaaa gttgctaaag aattaggaat taccttgtca gatgatgtga
     6421 ttagtaaagc aagcaaggtt atcgaataag agataagaga aaaggaaaaa tatgattgta
     6481 tcaacagttt cacaggctct tttatgggct gtactaggtt tgggaatatt cgttaccttt
     6541 cggattctga attttcctga tatgacgaca gagggctctt tcccacttgg aggagcggtt
     6601 gctgttacct tattgacgca aggagttcat cctatcttgg ctactctagc agcagttctt
     6661 gttggctgtt tggcgggctt tgtcacaggc ttgctctaca ccaagggaaa aatccctaca
     6721 cttttagccg gtattctagt tatgtcttcc tgtcactctg tcattctatt tatcatgggt
     6781 agggcaaatc taggcttact gaataccaaa cgtttacaag attttcttcc tttttctgag
     6841 caaattaatg gtctcttgct aggtctaggt agcctagcgg tggtgattgg tgccttgatg
     6901 ttcttcctct atactcgcct tggacaggcc tttattgcaa ccggggacaa tccagatatg
     6961 gctcgcagtt ttggtatcaa tacaagtcga atggagttgc taggtcttgt tctttcaaat
     7021 gggatcatcg ctcttgcagg tgccttgatt gcacaacaag aaggctatgc ggatgtgtcg
     7081 cgtggtattg gagtcattgt ggtcggtatg gctagtctga ttatcggtga ggtaatttat
     7141 ggtaacctta ctatgttaga acgattcttg gccattgttg tcggagcgat tttctatcag
     7201 ttcttaattt tggtggtcat ttccctcggt atcaatacca gctacctccg tatcttctcg
     7261 gccatgattc tggcaacttg cctcatggtt cctgagttga aaaataaact tctgaaagga
     7321 gccagtctgt cacgatgaaa gcaattgttg aattaaaaaa taccaccaag gtggtgacaa
     7381 acggttttga tgaagaacgt gtgattttgg acaatgtcaa tctgaccatt tatcagggtg
     7441 attttattac cattttgggt ggaaatgggg ctgggaagtc aaccctcttt aatgtcattg
     7501 ctggaaccct acccttgact agtggttcag tccatattct tggtgaggac gtgaccaatt
     7561 ggcctgcaga aaaacgtgct aagtatctgt cacgtgtttt ccaagatcct aaaatgggta
     7621 cagcgccacg gatgacggtg gcagaaaatc tactgatagc taagtaccgt ggcgagggac
     7681 ggggcttagt gccacgcaga ttggcccaac agacggaaga atttgcccag cttttgccga
     7741 gagtgggaaa tggtctagaa aaacatctgg acacgccagc agggctctta tcaggtggtc
     7801 aacgccaggc attgagtttg ttgatggcga gtttgaaaca gcctgaactt ttactcttgg
     7861 atgagcatac tgcagccctc gaccctaaaa ccagccaatc cttgatgcaa ctgacggatg
     7921 aattgattga gaccaaggga atgacggccc tcatggtcac tcaccagatg gaagatgctc
     7981 tgcgtcacgg taatcgcttg attgtcatga aaaatggtca gattattcag gaccaaacgg
     8041 ctgaagaaaa atccaagatg aaactggaag attattataa gttgtttgat taagaacctg
     8101 tgtggatagt tcgcaacttc caaccaagtt tggttttggt taaaactgaa tcttatatca
     8161 aacacatcac ttgtgaatac aggtctaaag tctggagaaa tccaggcttt tcttatcctt
     8221 tgaattttta gttaaaaagc agtataatat actaaatata tcaagaggtg ctgtcatgga
     8281 taaattggtt tttgaaagct tagctgactt gggaatggac tacaccattg tagagcatcc
     8341 accagctctg acaactgagg aagcagaccg ttacattgaa gggttagaag gagtacggac
     8401 caagtccatg tttctgacta ataagaaaaa gactgcattt tatttattga tcatggatga
     8461 ccagaagcag ctggatatgg accagtttcg tgatttggta ggagccaatc gtattcgcat
     8521 ggcctcaagt gaaagcttga tggaaaaaat gcacttgcct gcgggtgcgg tatctgtttt
     8581 tggcttgtta cataatgttg ataaggatat tcaagtcttt tttgataaag aaatcctttc
     8641 tgaacccatt ctaaccttcc accccaatgt taatacgaaa acaatttttg taaagacaga
     8701 ggatgtttta cgttttgtcg aagagattgg tttttcggca acgattgttg acttggggta
     8761 acaaagatga gaaaatgttt agctatttgt agtctgttgt gttgtctttt tttggtagga
     8821 tgtcggacag gagcagctta tcaggcagag attgaaccga tggaacaatc agaattgtat
     8881 acggaaaaag agattgaggc ggctattctt gtagttcaag attactttga tcaccatttt
     8941 aacagttgta aattgctgac tatcggttac agtggtgata atgaaaagga atttgatgag
     9001 tgggcggagc actatggtgc agaggaagct attatcctaa cttcgtcttt taaggtagca
     9061 gctgaggggg cagagcccac cttagagcct aatagtaccc atacggattg gaaatggatt
     9121 ttagtgcgga atgttggtgg taagtgggaa cataagggac atggttacta atgtatatgt
     9181 agaacttcgt tgattttcag cggagttttt tg
//
LOCUS       DBNFCX010000087         9128 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.087, whole genome shotgun sequence.
ACCESSION   DBNFCX010000087 DBNFCX010000000
VERSION     DBNFCX010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 9128)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9128)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9128
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.087"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(168..1400)
                     /locus_tag="AC1PJC_001813"
     CDS             complement(168..1400)
                     /locus_tag="AC1PJC_001813"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HIP6620791.1"
                     /translation="MEKRANSIRRKRYASYRTKMHLFFICGLATIILAIIIVSEHLVP
                     RLNQVSESMHSDNSVRIMAHGDLLYHLPILRGAERPDGSYDFSENFTYVKPWIEQADF
                     AIADFEGTISPDVELAGYPLFNAPAIVANNIHDAGYDLVDLAHNHILDSHLSGLVSTV
                     NTFRDAGVDTVGVYAEGNRATAPLYIREVNGIRIAVLAYAYGFNGMEALLSQEEYDAY
                     LSDFDKEKMRAEIERAEKEADITIVMPQTGVEYQLEPTEEQTSLYHQMIDWGADIVLG
                     GHPHVVEPAEIIEKDGQRKLIIYSMGNFLSNQRIESMDDTPNSQWTERGVLMDIRIQK
                     ENGQTSIRAAQAHPTWVNRISQGTYSLDGYERFSYQTYVLEDWVAGGRYYGQLDLDTQ
                     ARVDTAYQEMKDFVNLVW"
     gene            complement(1732..2670)
                     /locus_tag="AC1PJC_001814"
     CDS             complement(1732..2670)
                     /locus_tag="AC1PJC_001814"
                     /EC_number="1.3.98.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011999807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate oxidase"
                     /protein_id="HIP6620792.1"
                     /translation="MVSTATTLGGFTFDNCLMNAAGVWCMTKEELDVVKNSKAGTFVT
                     KTATLDYRAGNPEPRYQNVPLGSINSMGLPNQGLAYYLDYLLELQETEPERTFVLSVV
                     GMSPDETHEILRTVEASDFKGLTELNLSCPNVPGKPQIAYDFETTETILQEVFTYFTK
                     PLGIKLPPYFDIVHFDQAATIFNQFPLKFVNCVNSIGNGLYIKDESVVIKPKNGFGGI
                     GGEYIKPTALANVHAFYQRLKPEIQIVGTGGVLTGRDAFEHILCGASMVQVGTTLQKE
                     GVAAFERITAELQAIMSEKGYETIEDFRGKLQHLDD"
     gene            complement(2866..5505)
                     /locus_tag="AC1PJC_001815"
     CDS             complement(2866..5505)
                     /locus_tag="AC1PJC_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009986 - cell surface [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HIP6620793.1"
                     /translation="MKKKSVAIPVTLATGVLAVGTVGFQANQVSADTIVPTVSEEQAA
                     PVKVVSEQELASAQAAVTEAEQVAQAASNTATAKEQVAANAVQGVVEATDNLAKAEEL
                     VAKATEEEIEKTQTTIEELKETAASQETAQTLAEKELAEAKKAEKVPAEKVAQAQTAY
                     EKANSTLIAAQATATAATNQVAEAQAALATAEANVATTTNQVATAEQAVQAAQTALQT
                     AEQADKETAQQLAVAKENLAQAKQAQATAEADLATKVAAVTTAESSVKEAQAAVAAAE
                     AYLASLVSDGTELTPLEFFGAEVEEPSEGNAMVGVSGTFYEPDQAAILARINEIRKEA
                     FDEGLVDRYVPLKWSTILEYTTQIRAAEAEYTLGHIRWTDKSIFTVDTDNPEIVAVRS
                     ENLAWNFGRSGEAMLTAIEQFYAEKEDFVNQTPDAVVGHYVSLINPNYTHTALSAFLS
                     AGNDGWTGVAQHFTVGDTTEEAVGLYGDAVQILEAKEDYLFDYELLTPEIISDVNQNI
                     VLNVSAVFAPYDDYARVVSVYSGLTWESADENIAVVSESGVLTGISEGETSVYVTFPN
                     GKKETVKVKIVDIQKARDAVEQAKANLAKQEAELAKAKTARQAAQTSVETAKATVANR
                     QATYNQLLSVESKVTKAQAELDKAQATLTDAKEKAAAAKQDLTTAEQTLADKEQAASV
                     AKQDLSVAQAAHTTAKNALSEAQASLSALQEITATKEAALKLAEANLAKTVADLKAAE
                     AYLASLLNAQENYRLAQQLLEEAKVAAAEALAQRDAALEAKQAAQTDFETALSKYKSM
                     RLAYEAQLALQKAAEAKELKQAPVATPKPLSKPEVSQTSSKVTATQTKTLPATGSVES
                     MLGLTGLALLGTLALANQRRRRN"
     gene            5737..7083
                     /gene="gdhA"
                     /locus_tag="AC1PJC_001816"
     CDS             5737..7083
                     /gene="gdhA"
                     /locus_tag="AC1PJC_001816"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011999806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016639 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HIP6620794.1"
                     /translation="MSNAKAYIQASFEAVKARNPHETEFLQAVEELFSTLEPVFEAHP
                     EYIEENILARIVEPERIISFRVPWTDKDGNVQVNRGYRVQFNSAVGPYKGGLRFHPTV
                     NQSILKFLGFEQIFKNVLTGLPIGGGKGGSDFDPKGKTDAEIMRFCQSFMTELQKHIG
                     PSLDVPAGDIGVGGREIGYMYGQYKRLRQFDAGVLTGKPLGFGGSLIRPEATGYGLVY
                     FTDNMLAANGKSFKDQTVLISGSGNVAQYAVQKATELGAKVISVSDSNGYIIDETGID
                     FDLLVDIKEKRRARLTEYAAEKATAKYFEGSVWNYDGKADIALPCATQNEINGEQAAA
                     LVKNGVYCVAEGANMPSDLDAIKVYKENGVLYGLAKAANAGGVAVSALEMSQNSLRLS
                     WTREEVDGRLKDIMANIFNTAKETAEKYDLGTDYLAGANIAAFEQIADSMIAQGLV"
     gene            complement(7318..7905)
                     /locus_tag="AC1PJC_001817"
     CDS             complement(7318..7905)
                     /locus_tag="AC1PJC_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4352 domain-containing protein"
                     /protein_id="HIP6620795.1"
                     /translation="MQTKDFVVENGQMYYKKKPLHKQPLFWTTIAGAVLSFVLGVTCF
                     IFMIGLSAANFDNWDTGSDGYIDETVEYTEYQVGDSVDFSDGLHVTVTSMGKDDSVEL
                     VDSYYSTAYVVEMEVENSTAEELYFDEYYFSLMDPVSQIPFTLDLRTYDVNLVEKLKP
                     GEKVQVKLIYGIDNETNFGFTYEDAMWTELVAEGI"
     gene            complement(7916..8764)
                     /locus_tag="AC1PJC_001818"
     CDS             complement(7916..8764)
                     /locus_tag="AC1PJC_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HIP6620796.1"
                     /translation="MNEFIQKYVSQFNLDAILTTMLNKLLSLVLLFIAFYIIKKIAKA
                     SVKKVLVPSLKVSTQDIGRQKTISRLVESILNYLLYFILIYCILSILGLPVSSLLAGA
                     GIAGVAVGLGAQGFLSDLVNGFFILIERQFDVGDVVKLTNGPITISGTIVSMGIRTTQ
                     VRDADGTLHFIPNRNILVVSNQSRGDMRAQIDIPLKFNTDLEQVYRVIEEVNLREISN
                     FDQITGVTVLGPQNAISGQFVFRVNLFVANGQQNKIYHQFFGFYQDALRQAGIDLPSS
                     GPTVLK"
BASE COUNT         2571 a         2083 c         1753 g         2721 t
ORIGIN      
        1 agtgaccctg catttgaatg tagggtccta ttttttgata taatagtagt atattttttg
       61 atgattctag gagaaattat ggtcgatata agaaggaaac tccctctgtt tcaagcaaat
      121 gatgtcaaca tctgttgcaa ttaatcgaac tgtcatcttc tctctcctca ccataccaaa
      181 ttgacaaagt ctttcatttc ttgataggct gtatccacac gcgcctgcgt atctagatcc
      241 aattgtccat agtatcgacc accagcgacc cagtcttcca atacataggt ctgatagcta
      301 aagcgctcat aaccatctag tgaatacgtt ccctgagaaa tacgattcac ccaggttgga
      361 tgcgcttggg ctgcccgaat acttgtctgc ccattctctt tctgaatcct tatatccatc
      421 aagacacccc gctcggtcca ctgggaattt ggtgtatcat ccatgctttc aatacgctga
      481 ttggacagga aattccccat cgaatagata atcaattttc tctgaccatc tttttcaata
      541 atctctgcgg gctcgactac atgcggatgc ccaccaagaa cgatgtctgc tccccaatca
      601 atcatttgat ggtacaaact ggtctgttcc tccgtaggct ccaactggta ttccacaccc
      661 gtctgaggca tgacgatggt aatatctgcc tctttctcag ctcgctcaat ctctgcccgc
      721 atcttttctt tatcaaaatc cgataaatag gcatcatatt cctcctgact cagcaaagcc
      781 tccatcccat tgaaaccgta agcataggct aaaacagcta tacggatacc attgacttct
      841 cgaatgtaga gtggtgcagt tgcccgattg ccttcagcgt agacaccgac tgtatccaca
      901 cctgcatctc taaatgtatt gacagtggaa accaatccag aaagatgtga gtccaaaata
      961 tgattgtggg ctaagtccac caaatcgtag cctgcatcat ggatattgtt ggcgacaatg
     1021 gcaggcgcat taaaaagtgg gtaacctgct aattcgacat ctggggaaat ggtcccttca
     1081 aagtctgcga tagcgaaatc agcctgttct atccagggct ttacgtaggt aaaattctca
     1141 gaaaaatcgt aacttccatc tggccgttct gctcctcgaa gaataggtaa gtgatagagt
     1201 agatctccgt gggccatgat gcgaacagaa ttatctgagt gcattgattc tgatacctga
     1261 ttcagcctag gaactaggtg ctcgcttaca ataataatcg ccaagataat agtcgctaag
     1321 ccacaaataa aaaacaaatg catctttgtc cgataggacg catatcgttt tctgcgaata
     1381 gagttcgccc ttttctccat acctttaccc tcatactccc tacttaagaa cctttgttca
     1441 aaatacagtc agtagtccct caaaaaacta tttcttccat aaaagtacat cacttataaa
     1501 tagaggttct aatattagta tacgacattt ttgctaaaaa atctaaataa aatcagaatt
     1561 ccatctcaca aatatatgtt tccgctatgt attccattcc tcaaacgatt atcagaccga
     1621 tcttcacaga ccatttaaaa agagctaaca ttatcccctc gtgactccct aaaagactat
     1681 ctgggagaac ggtacaatgt tagcttcttt ttatgtcttc aacagatgat ctcaatcatc
     1741 taagtgctgt agcttgccac gaaaatcctc aatggtctcg tagccttttt cagacatgat
     1801 ggcctgcaat tcagccgtaa tgcgttcaaa ggctgccaca ccttcctttt gcagggttgt
     1861 tccaacttga accatgctgg caccacagag aatgtgttcg aaggcatccc gacctgtcaa
     1921 gacgccacca gtcccaacaa tctgaatctc cggtttcaag cgctggtaaa aagcgtggac
     1981 attggcaaga gcagtcggct tgatatactc tccaccgata ccaccaaaac catttttagg
     2041 cttgatgaca actgactcat ccttgatgta gagaccattt ccaatcgaat tgacacagtt
     2101 gacaaacttc aaaggaaact ggttgaaaat cgttgctgct tggtcaaaat gcacaatatc
     2161 gaaataaggt ggtaacttaa taccgagtgg tttggtaaag taagtgaaga cctcctgcaa
     2221 gatggtttct gtcgtttcaa aatcataggc aatctgcggt tttccaggga cattgggaca
     2281 agaaagattt aactctgtca gccccttaaa atcactggct tctacagttc tcaaaatctc
     2341 gtgagtctca tcaggcgaca ttccaactac agataaaaca aatgtgcgtt ctggctccgt
     2401 ttcctgcaat tctagtagat aatccaaata gtaagccaag ccctgatttg gcaagcccat
     2461 cgaattgata gaaccaagcg gaacattctg ataacgcggt tctggattac ccgcgcggta
     2521 gtccaaggtt gctgtttttg tcacaaaagt acccgccttc gagttcttaa ccacatccaa
     2581 ttcttccttg gtcatgcacc aaacccctgc cgcattcatc aggcagttgt caaaggtaaa
     2641 tccaccgagt gtcgttgctg ttgaaaccat ctttcctcct attttcgctc aatagatacc
     2701 aaccattgtc aaccagccat aaaaaactga cggctttccc aattggcata acaaagagcg
     2761 tcttttttat ttgtttcatt atagcatagc ttctctcgag atgaggcaaa tcgctgtcaa
     2821 tgttcgtatt ttaaaaagag agtccaaatg gaactctcta ggttattaat ttctacgtct
     2881 acgctggtta gcaagagcta aggttcctag caatgccaaa cctgtcagtc ctaacattga
     2941 ctcaacagaa ccggttgcag gtagagtctt agtttgagtt gcagttacct tgctacttgt
     3001 ttgagaaact tctggttttg acaatggttt aggagtcgct acaggagcct gcttcaattc
     3061 tttagcttca gccgcttttt gcaatgctaa ctgtgcttca taagcaagtc tcatgctctt
     3121 atattttgat agagcagttt caaaatctgt ctgcgctgct tgtttggctt ccaaggctgc
     3181 atcacgttgc gcaagagctt ctgctgccgc tactttcgct tcctcaagca actgctgagc
     3241 taaacgatag ttctcttgtg cattgagtaa gcttgcaaga taagcttctg ctgctttcaa
     3301 atctgcgact gttttggcaa ggttagcctc tgcaagtttc aaagctgctt ctttcgttgc
     3361 agttatttcc tgtaaagcgg ataggcttgc ctgtgcttct gataaagcat tttttgcagt
     3421 cgtatgggct gcttgagcga ctgataaatc ttgttttgca acacttgccg cttgttcttt
     3481 atcagcaagt gtctgctcag cagtagttaa gtcttgtttg gcagcggctg ctttttcttt
     3541 tgcatccgta agagtagctt gagctttatc aagttccgct tgagctttcg ttactttaga
     3601 ctcaacagat aataattggt tataagttgc ttgacgattt gcaacggtag ctttcgcagt
     3661 ctctacactt gtctgtgccg cttgacgtgc tgtcttagct ttcgcaagtt cggcctcctg
     3721 cttcgctaaa ttcgctttag cttgctcaac tgcatcgcgt gctttttgaa tatcaactat
     3781 tttgactttg accgtttctt tcttgccatt tgggaaggtt acgtacacgc ttgtttcgcc
     3841 ttctgagata cctgtaagca cgcctgattc tgaaactaca gcaatgttct cgtctgcaga
     3901 ttcccaagtt agtcctgaat aaacagatac gacacgggca tagtcatcgt aaggggcaaa
     3961 aactgctgaa acattcagca ctatattctg attaacatct gatattattt caggcgttag
     4021 caattcgtaa tcaaataaat aatcttcttt ggcttctaaa atctgtacgg catcaccata
     4081 caaaccaacc gcttcttctg tggtatcccc tacagtaaag tgttgtgcca cacctgtcca
     4141 accatcattg ccagctgaca agaaagctga tagggctgta tgggtgtaat tcgggttgat
     4201 tagtgataca tagtgaccta ctaccgcatc cggagtctgg ttcacaaaat cttctttttc
     4261 tgcataaaac tgctcaatag cagtcaacat tgcctcacct gatcgaccaa aattccaagc
     4321 caaattctca gaacgtacgg ctacaatttc aggattatca gtgtctacag taaagatgct
     4381 cttatctgtc caacgaatgt gacccaaggt atactctgcc tctgcagcac gaatttgagt
     4441 tgtatactct aaaatagttg accacttaag aggtacataa cgatctacaa ggccttcatc
     4501 aaaagcttcc ttacgaattt cattaattct agctaagata gctgcttgat caggttcgta
     4561 gaaggtgcct gacacaccca ccatagcatt tccttcagac ggctcttcaa cctctgctcc
     4621 gaagaattct agcggagtta attctgttcc atctgaaacc aaactagcta gatatgcttc
     4681 tgctgctgca actgccgctt gggcttcttt aacacttgat tcagccgtag ttaccgcagc
     4741 tacttttgta gccaaatcag cctcagcagt ggcctgtgct tgtttggctt gagctaagtt
     4801 ctccttggct accgccaatt gttgagctgt ttccttatcg gcttgttcag ccgtttgcaa
     4861 agcggtttgg gctgcctgaa ctgcttgctc ggcagttgca acttggttgg tagttgtcgc
     4921 tacatttgcc tccgctgttg caagagcagc ttgggcttcg gcaacttggt tagttgctgc
     4981 agtagccgta gcttgtgcag caattaatgt agaattagct ttttcatagg ctgtttgtgc
     5041 ttgagccacc ttctcagctg gaaccttttc agccttctta gcctcagcca gttccttttc
     5101 agcaagagtt tgagctgttt cttgactggc agctgtttct tttaactctt ctatagtagt
     5161 ctgagtcttt tcaatttctt cctcagtagc cttcgctaca agctcttcag cttttgctag
     5221 attatcagtc gcctccacaa cgccttgaac agcgttagca gcaacttgtt ccttagctgt
     5281 agcagtattt gaagcagctt gggcaacttg ctcagcctct gtcacagctg cctgtgcact
     5341 tgcaagctct tgctcactaa caacctttac tggtgcagct tgttcttctg agacagtagg
     5401 aacaatagta tcggcactga cttggtttgc ttgaaaacca actgtcccaa cagctaaaac
     5461 acctgtagca agcgttactg gaatagcaac agatttcttt ttcatatata ttacccctat
     5521 attttactta cgacttttat attatactat cattcctcat ttgtcaatgt tcgtatgtaa
     5581 agaaagtcta ctttttatct actcgcaact tgctcagaaa gtttagaaaa attatcattt
     5641 ttttctttac atttaaaaat catggtgcta taataattat cagataaatt aaattgtctg
     5701 acaatttaat aaataaaaaa gaaatcaggt gatcccatgt caaatgccaa agcttacatc
     5761 caagcttctt ttgaagcagt caaagcccgc aacccacatg aaacagaatt cctccaagct
     5821 gtagaagagc tcttctctac acttgagcct gtttttgaag cacacccaga atacatcgaa
     5881 gaaaacatct tggctcgtat cgttgagcct gagcgtatca tcagcttccg tgttccatgg
     5941 acagataaag atggaaatgt tcaagtcaac cgtggctacc gtgttcagtt caactcagct
     6001 gtaggtcctt acaaaggcgg tcttcgcttc cacccaactg taaaccaatc catcttgaag
     6061 ttcctcggtt ttgaacaaat cttcaaaaac gtcttgactg gtctgccaat cggtggcggt
     6121 aaaggtggat ctgacttcga tccgaaaggc aaaacagacg ctgaaatcat gcgtttctgc
     6181 caaagcttca tgactgaatt gcaaaaacac atcggacctt cacttgacgt ccctgctggt
     6241 gacatcggtg tcggtggtcg tgagattggt tacatgtacg gtcaatacaa acgcctccgc
     6301 cagtttgatg caggtgtctt gactggtaaa cctcttggct ttggtggttc attgatccgc
     6361 ccagaagcaa ctggttacgg tttggtttac ttcactgata acatgttggc agcaaacggt
     6421 aaatccttca aagaccaaac tgtccttatc tcaggttctg gtaacgttgc ccagtatgct
     6481 gttcaaaaag cgactgaact tggtgcaaaa gttatttctg tttcagactc aaatggttac
     6541 atcattgacg aaactggtat cgacttcgac ctcttggtgg acatcaaaga aaaacgccgc
     6601 gctcgtttga cagaatacgc tgcagaaaaa gcaactgcta agtacttcga aggttctgta
     6661 tggaactacg acggcaaggc tgatattgcc cttccatgtg cgactcaaaa cgaaatcaac
     6721 ggcgagcaag ctgctgccct tgtgaaaaat ggcgtttact gtgtggctga aggtgccaac
     6781 atgccatctg accttgatgc tatcaaagtt tacaaagaaa acggcgttct ttacggtctt
     6841 gcaaaagctg ccaacgctgg tggtgtagct gtatctgccc ttgaaatgag ccaaaacagc
     6901 cttcgtcttt catggactcg tgaagaagta gacggccgtc ttaaagacat catggcaaat
     6961 atcttcaaca cagccaaaga aactgctgaa aaatacgacc ttggtacaga ctaccttgca
     7021 ggtgctaaca tcgcagcctt tgaacaaatt gcggatagca tgattgccca aggtttggta
     7081 taagcttact tttagtttac taaactataa taaaaacgcc cccaaaattg acgtgctaac
     7141 tttgggggta tttttcatta aaaagaagag gagaacagtg gataaacatg ttctcctttt
     7201 taaatgtaaa aataacagat aggtcggata tagtacaatt accaagccga acaatctgaa
     7261 ccaaggggcg tataaacccg caaaattgtg ctatatttaa aactttttct acagcaatta
     7321 gataccttct gcgactaatt ccgtccacat ggcatcttcg taggtaaaac caaagtttgt
     7381 ttcattatct ataccgtaga taagttttac ttgtactttc tctcctggct tcagcttttc
     7441 aactagattc acatcatagg tccgcaaatc cagggtaaag ggaatctgac taacgggatc
     7501 catgagactg aaatagtatt cgtcaaaata gagttcttct gcggtcgaat tttcaacttc
     7561 catttcaaca acataagctg tgctgtagta gctatctact agttctacgc tatcatcttt
     7621 gcccatagac gttactgtca catgaagacc atcagaaaaa tcaactgagt caccaacttg
     7681 atactccgtg tattccacag tctcatcaat gtatccgtca ctacctgtat cccaattatc
     7741 gaaatttgct gcgcttagac caatcataaa aataaaacag gtgactccta ggacgaagga
     7801 gaggactgca ccagcaatgg ttgtccaaaa gagaggctgt ttgtgcaagg gtttcttctt
     7861 ataatacatc tgcccatttt caacgacaaa atcttttgtt tgcataataa actccttatt
     7921 ttaaaacagt tggcccactt gaaggtaaat ctattcctgc ttgacgcaga gcatcttgat
     7981 aaaaaccaaa gaattgatga tagatcttgt tctgttgacc gttggctacg aaaagattaa
     8041 cacgaaatac aaactgtccc gaaatagcgt tttggggacc taatacagtc acacctgtaa
     8101 tctggtcaaa attgctgatt tctctcaaat tgacctcttc tattacgcga tagacttgtt
     8161 ccaaatcggt attaaatttg agcggaatat cgatttgagc acgcatgtcc cctcttgact
     8221 ggttggatac taccagaata ttccggttcg gaataaagtg tagggttcca tctgcatcac
     8281 gcacttgagt tgttcgaatt cccatactaa cgatggttcc tgaaatggta atgggtccgt
     8341 tggttaattt aaccacatct ccgacgtcaa actgtcgttc aattaagata aagaatccat
     8401 tgaccaagtc tgagagaaaa ccttgtgctc ctagccccac agctaccccg gcaattccag
     8461 ctcctgcaag gagactagat actggtaaac cgagaatact cagaatacag tagataagaa
     8521 taaagtagag tagataattt aggatgcttt ccaccaaacg actaatggtc ttctggcgac
     8581 caatatcctg agtagaaact tttagagacg gcaccaacac ttttttcaca gaagctttgg
     8641 ctattttctt gatgatgtag aatgctataa ataataaaac taaggaaaga agtttattaa
     8701 gcatcgttgt caaaatagca tctagattaa actgagaaac atatttttgt ataaattcat
     8761 tcatggaatt attatagcaa aaaaacctgt gaaaaaggga aaaagacagc cgattgacgc
     8821 cgtacgcatg aagaaaatgc atgtaagcat tttcgagcta catgcatttt ttcaaaaaaa
     8881 tttcacggaa ttcgcactat cacaagaaca gtttcctatc tctaaggcta ttatatcatg
     8941 tttttctact aaaaaacgga cttctcatcg gaaaaactga tttctgaaaa cgtttatcgt
     9001 ggattttaag ggaaaaaata aaacaaaaca gtacaacatc ttgaggctac tatcttattt
     9061 ttatcattaa tttaactcta aaaggtcatg acaaaacgac accttatgtt tcaaaatttt
     9121 tgataaga
//
LOCUS       DBNFCX010000088         8889 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.088, whole genome shotgun sequence.
ACCESSION   DBNFCX010000088 DBNFCX010000000
VERSION     DBNFCX010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 8889)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8889)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8889
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.088"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            107..577
                     /gene="rimP"
                     /locus_tag="AC1PJC_001819"
     CDS             107..577
                     /gene="rimP"
                     /locus_tag="AC1PJC_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042274 - ribosomal small subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HIP6620797.1"
                     /translation="MSSIIELVTAAITPAIQTPYELVDVEYGKMGGDYVLSIFVDKEG
                     GISLQDTADLSEKISPILDTIKPDPFPDQYMLEVTSPGLERPLKTADAVEKAVGKYIH
                     VKLYQAIDKIKVFEGTLLSFDGTDLIMEYMDKTRKKEVTIPYQTVAKARLAVKL"
     gene            650..1792
                     /gene="nusA"
                     /locus_tag="AC1PJC_001820"
     CDS             650..1792
                     /gene="nusA"
                     /locus_tag="AC1PJC_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HIP6620798.1"
                     /translation="MSKEMLEAFRILEEDMGINKADIIDAVTESLRSAYKRRYGQSES
                     AVIEFDEKKGDFHVFTVREVVDEVFDSRLEISLKDALAISSAYEMGDKIKFQEDPAEF
                     GRVAAQSAKQTIMEKMRKQKRAITFNTYKQHENEIMSGTVERFDNRFIYVNLGTIEAQ
                     LSKQDQIPGEVFQSHDRIEVYVYKVEDNGRGVNVFVSRSHPEMIKRLMEQEIPEVYDG
                     TVEIMSVAREAGDRTKVAVRSHNPNVDAIGTIVGRGGSNIKKITSKFHPARYDAKNDR
                     MIPTEENIDVIEWVADEAEFIYNALAPAEVDQVLFDTEDGKHATVVVPDDKLSLAIGR
                     RGQNVRLAAHLTGFRIDIKSASEYEAFEATQYATDEVVEEVEEEQE"
     gene            1809..2105
                     /gene="rnpM"
                     /locus_tag="AC1PJC_001821"
                     /gene_synonym="ylxR"
     CDS             1809..2105
                     /gene="rnpM"
                     /locus_tag="AC1PJC_001821"
                     /gene_synonym="ylxR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006531117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase P modulator RnpM"
                     /protein_id="HIP6620799.1"
                     /translation="MAKARKIPLRKSVVSGEIIDKRDLLRIVKNKEGQVFIDPTGKAN
                     GRGAYIKLDNDEASQAKKRRVFDRSFSMEVAEEFYDELIAYVDHKIKRRELGLE"
     gene            2062..2400
                     /locus_tag="AC1PJC_001822"
     CDS             2062..2400
                     /locus_tag="AC1PJC_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxQ-related RNA-binding protein"
                     /protein_id="HIP6620800.1"
                     /translation="MLIIRSRGENLDSNKRQKILNLLGLAQRAGRLVSGEDLVVEAIQ
                     KGQAKLVFLAEDAAGNLSKKVTDKSHTYQVEVVTVFSTLELSAAVGKARKVLAVTDAG
                     FTKKMRSIME"
     gene            2418..5240
                     /gene="infB"
                     /locus_tag="AC1PJC_001823"
     CDS             2418..5240
                     /gene="infB"
                     /locus_tag="AC1PJC_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HIP6620801.1"
                     /translation="MSKKRLNEIARELGVSSKEVVAKAQELGFEVKSHASSVDEASAK
                     RLAESFGGQESEATKVAAKVSKPEKVDETPKVETAKEEKAKETQPVVKEEVAASAVQS
                     APHRPQSRNFKAEREARAKEQAAKRAQGQGKGGQAKSGQDRRDNRQQGQGRSNNERND
                     RRDNRRDQRPEERKDNRFGERRDNRANRRQDNRSGQSARFEQREAAKPAGPKIDFKAR
                     AAALKAEQNAEYARTSEERFRQAQEAKKQPKKPKEIKFEEPVVESKPFVKPAPVASVP
                     EQVAETTVDTRRKKQARPDKKRDFNSDEEDGPRKQQRNRNSQNQVRNQRTSNWNNNKK
                     NKKGKANQPAKPVTERKFHELPTEFEYTAGMTVAEIAKRIKREPAEIVKKLFLMGVMA
                     TQNQSLDGDTIELLMVDYGIEAKEKVEVDNADIERFFVEEGYLNEEEMTERPPVVTIM
                     GHVDHGKTTLLDTLRNSRVATGEAGGITQHIGAYQIEEAGKKITFLDTPGHAAFTSMR
                     ARGASVTDLTILVVAADDGVMPQTIEAINHSKAANVPIIVAINKIDKPGANPERVIGE
                     LAEHGVISTAWGGESEFVEISAKFNQNIDELLETVLLVAEIQELKADPTVRAIGTVIE
                     AHLDKGKGAVATLLVQQGTLNVQDPIVVGNTFGRVRAMTNDLGRRVKTAGPSTPVSIT
                     GLNEAPMAGDHFAVYEDEKSARAAGEERAKRALLKQRQATQRVSLENLFDTLKAGEVK
                     SVNVIIKADVQGSVEALASSLQKIEVEGVRVNIVHSAVGAINESDITLAEASNALVIG
                     FNVRPTAEARSQAEADDVEVRLHSIIYKVIEEMEDAMKGMLDPEYEEKIIGEAIIRET
                     FKVSKVGTIGGFMVVRGKVTRDSSVRVIRDGVVVFDGKLASLKRYKDDVKEVGNAQEG
                     GLMIENYNDLKVDDTIEAYIMEEIKK"
     gene            5395..5748
                     /gene="rbfA"
                     /locus_tag="AC1PJC_001824"
     CDS             5395..5748
                     /gene="rbfA"
                     /locus_tag="AC1PJC_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HIP6620802.1"
                     /translation="MANHFRTDRVGMEIKREVNEILQKKVRDPRVQGVTITDVQMVGD
                     LSMAKVYYTIMSNLASDNQKAQTGLEKATGTIKRELGRKLTLYKIPDLVFEKDQSIEY
                     GNKIDQMLRALEQKD"
     gene            6007..6696
                     /locus_tag="AC1PJC_001825"
     CDS             6007..6696
                     /locus_tag="AC1PJC_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin lysis protein"
                     /protein_id="HIP6620803.1"
                     /translation="MKKFISRIMLVSTVVLLAACQSIQTKEDETSNTSSSSQVTTSSD
                     QQSTSESSSETTSSSDSQTEASSTNTQAIPTVYQSVIDRYQANLGQVSEAINQDEVSS
                     YLSLLTSQGQEYSGAFYSLYDIDQNGTEELLIALNKSGDYILIDLYTQLSGENFRLVD
                     NFRNIGFEIGPDAILRPLQDGTYLFEGGGVYRIYQYNAMIPGLKRISESDTNPETSPL
                     LELKSLHWVKL"
     gene            6905..7961
                     /locus_tag="AC1PJC_001826"
     CDS             join(6905..7369,7371..7961)
                     /locus_tag="AC1PJC_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612110.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HIP6620804.1"
                     /translation="MTKEFTQTQVEELKQALKDKNNAPHHRKIQALILYSECHNLTSV
                     AKSVGFVHQTVRNLLNRYLSGGLEALLKENRGGRRRSYMTHEEEEVFLKEHLSSSLNG
                     EFVTVNTLFKAYQERVGHKTTREGFYALLKRHGWRKVSPRPQHPKKADAETILRLKIK
                     SLFEERTSKRFIDGKEYQKIRLMYQDEAGFGRISKLGSCWSPKGYRPHVASHHIREYR
                     YCYGAVDAHTGDSFFIIAGGCNSDWMNAFLRQLSAAYPEDYIVLVMDNAIWHKSQTLN
                     IPKNIEFTFIPPYTPEMNPIEQVWTEIRKLGLKNKVFRTLNEVIDKLQEVIQTLTAYQ
                     LKSIVDRDWTSAIFDFN"
     gene            8132..8290
                     /locus_tag="AC1PJC_001827"
                     /pseudo
     CDS             8132..8290
                     /locus_tag="AC1PJC_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000040325.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
     gene            8520..>8889
                     /locus_tag="AC1PJC_001828"
     CDS             8520..>8889
                     /locus_tag="AC1PJC_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011681501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIP6620805.1"
                     /translation="MKNFGEIFKKFRESRGLKLKDVAKVGISTSQLSRFEKGETDLTI
                     SKFLLILDEINMPIDEFMYAVHDFHRDELNELLSKVRYYVSTRDVEGMKKLLYSQIES
                     EDKREKFYHINIILLKIRLQD"
BASE COUNT         2859 a         1613 c         2047 g         2370 t
ORIGIN      
        1 gaatgatagt acaagggagc ttactgtcaa aggaaataga gtgtcctgga tagtgcgaac
       61 tatttgagta atgtatttct agcgactgta aaaataggag gtgtttatgt catcaattat
      121 tgaattggtc acagcagcaa ttacccccgc tattcaaact ccttacgagt tggtagatgt
      181 ggaatatggt aaaatgggcg gtgactatgt cctatcgatt tttgtcgata aggagggtgg
      241 aatttccctt caagatacag cagatttatc cgaaaagatc agtccgattt tggacactat
      301 caaaccagat ccatttccag accaatacat gctggaggta acaagtccag gtttggaacg
      361 tcctttaaaa acggcagatg ctgttgagaa ggcggttgga aagtacatcc atgtcaagct
      421 ctatcaggca attgataaaa tcaaggtttt cgaaggaacg ttgctctcct ttgatggaac
      481 agacctgatt atggaatata tggataaaac tcgtaagaag gaagtgacta ttccttacca
      541 gacggtggct aaggcccgtt tggctgttaa gttataatgc tctttcatga gtattttaaa
      601 agatattaga ctttaagaaa ggaccttttg agcgcaaaag gaaaacaaca tgagtaaaga
      661 aatgctagaa gccttccgta ttttagagga agacatgggt attaacaaag cggatatcat
      721 tgatgcagtt acagagtcgc ttcgttcagc ttataaacgc cgttatggtc aatcagaatc
      781 agcagtgatt gaatttgacg agaaaaaagg cgatttccat gtatttactg ttcgtgaagt
      841 agtagatgaa gtatttgata gccgactaga aattagtcta aaagatgcct tggctatttc
      901 atcagcttat gaaatgggtg acaaaattaa attccaagaa gacccagcgg aatttggacg
      961 tgtagctgct caatcagcta aacagaccat catggaaaag atgcgcaaac aaaagcgtgc
     1021 cattaccttc aatacctaca agcaacatga aaatgagatt atgtcaggta cggtagagcg
     1081 ttttgataat cgctttatct atgtcaacct tggtacgatt gaagcacagt tgtcaaaaca
     1141 ggatcaaatt cctggtgagg ttttccaatc tcatgatcgc atcgaggtct atgtctacaa
     1201 ggtagaagac aatggtcgtg gggttaacgt atttgtcagc cgtagccatc cagaaatgat
     1261 caaacgtctc atggaacagg aaattccaga agtatacgat ggaacagttg aaatcatgag
     1321 tgttgcccgt gaagctggag accgtacgaa agtggctgtt cgtagtcata atccaaacgt
     1381 ggatgccatc ggtacgatcg ttggtcgtgg tggttcaaat atcaagaaaa tcactagcaa
     1441 attccatcca gctcgttatg atgctaagaa tgaccgtatg attcctactg aggaaaatat
     1501 tgacgttatc gagtgggtag ctgacgaagc ggaatttatc tacaatgcct tagcacctgc
     1561 tgaagttgac caagtattgt ttgacacgga agatgggaaa catgctacag tcgttgtacc
     1621 agatgataag ttgtcattgg caattggtcg tcgtggtcaa aacgttcgtt tggcagcgca
     1681 tttgacagga ttccgtatcg acatcaagtc agcatcggag tatgaagctt ttgaagcaac
     1741 tcaatatgca acagacgaag ttgtagaaga agtcgaagaa gaacaagaat aaggcaaaag
     1801 gagcaaccat ggcaaaagct agaaaaatac ccttgcgcaa gtctgtggtg tccggtgaaa
     1861 tcatcgacaa acgggatttg ctccgtattg taaaaaataa agaaggtcaa gtatttatcg
     1921 atccaacagg caaggcaaac ggtcgtgggg cttacatcaa gcttgataat gatgaggcaa
     1981 gccaagctaa gaaacgtcgt gtcttcgatc gttcctttag tatggaagtg gccgaagaat
     2041 tttacgatga attaattgcc tatgttgatc ataagatcaa gaggagagaa cttggactcg
     2101 aataagagac agaaaatctt aaatttatta ggtttggccc agcgagctgg tcgcctggtt
     2161 tcgggtgagg acctggttgt tgaagctatt caaaaagggc aggcaaagtt ggtgttttta
     2221 gccgaagatg ctgctggaaa tttaagtaaa aaagtaacag ataaaagtca tacctatcaa
     2281 gtagaagttg taacagtgtt ttcaacactg gaattgagtg cagctgttgg caaggctaga
     2341 aaagttcttg cagtgacaga cgctggattt acaaagaaga tgaggtctat tatggaatag
     2401 aacaggagga caaggcattg tctaagaaga gattgaatga aatagcccgt gaattaggcg
     2461 taagcagtaa ggaagttgtt gctaaggctc aagaattggg ttttgaagtc aaaagtcatg
     2521 cttcaagcgt agatgaagca agtgctaaac gccttgcaga aagctttggg ggacaagaat
     2581 cagaggcaac taaagttgcg gcaaaagtta gcaagcctga gaaggttgat gaaactccaa
     2641 aggtggaaac agctaaggaa gaaaaagcta aggaaacaca gccagtagta aaagaagaag
     2701 ttgcggcaag cgcagtacaa tcagctccac atcgtccaca gagtcgaaac tttaaggcag
     2761 agcgtgaagc acgggccaaa gagcaggctg ctaagcgagc tcagggtcaa ggaaaaggtg
     2821 gtcaagctaa atctggtcag gaccgtcgtg ataaccgtca acaaggtcag ggacgttcaa
     2881 acaatgagcg aaatgatcgc cgcgacaatc gtcgtgacca gcgtccagaa gagcggaaag
     2941 acaaccgatt tggtgaacgc cgcgataatc gtgccaaccg tcgtcaggac aaccgttcag
     3001 gtcagtcagc tcgctttgaa caaagagagg ctgcaaaacc agcaggacct aaaattgact
     3061 tcaaagcgcg tgctgctgct ttgaaagcag aacaaaatgc ggagtatgct cgtaccagtg
     3121 aagaacgttt tcgtcaggct caggaagcta aaaagcaacc taagaagcca aaagaaatta
     3181 agtttgaaga accggttgtg gaaagcaaac catttgtgaa gcctgcacct gttgcatcgg
     3241 taccagagca agttgcagaa actactgtag atacccgtcg taagaaacaa gctcgaccag
     3301 ataaaaaacg tgactttaat agtgacgaag aagatggtcc acggaaacaa caaagaaatc
     3361 gaaatagtca aaatcaagtg agaaatcaaa gaacaagtaa ctggaataac aacaagaaaa
     3421 ataaaaaagg caaggctaac caacctgcta aacctgtcac agaacgcaag ttccacgaat
     3481 tgccaactga atttgaatac actgctggca tgaccgtcgc agaaattgca aaacggatca
     3541 aacgtgaacc tgctgaaatt gtgaaaaaac tcttccttat gggagttatg gcgactcaaa
     3601 accaatcttt ggatggagat actatcgaac tcctcatggt tgattatggt attgaagcga
     3661 aagaaaaggt agaggtcgat aacgcagata ttgagcgttt cttcgtagaa gagggctacc
     3721 tcaatgaaga agagatgaca gaacgcccac ctgttgtgac tatcatggga cacgttgacc
     3781 atggtaaaac aaccttgttg gataccctac gtaattctcg tgttgctact ggggaagctg
     3841 gtggtatcac acagcatatc ggtgcctacc aaattgagga agctggtaag aaaattacct
     3901 tcttggatac tccaggacac gcggccttta cttctatgcg tgcacgtggt gcatctgtta
     3961 ccgacttgac catcctagtc gttgcagcag atgatggtgt catgccacaa acgattgagg
     4021 ctatcaacca ctcaaaagca gctaatgtgc caatcattgt agctatcaac aagattgaca
     4081 agccaggtgc aaacccagag cgtgtcatcg gtgaattggc tgagcacggt gttatctcaa
     4141 ccgcttgggg tggagaatct gaatttgtag aaatctcagc taagtttaac caaaacattg
     4201 atgaattgtt ggaaactgtt cttttggttg ctgaaattca agaactgaag gcagacccaa
     4261 ctgttcgtgc gattggtaca gttatcgaag cgcatttgga taaaggtaaa ggtgcggttg
     4321 caaccctcct cgttcaacaa gggacactta atgttcaaga cccaatcgtt gtcggcaata
     4381 ccttcggacg tgttcgtgcc atgacaaacg accttggtcg tcgtgttaaa actgctggtc
     4441 catctacacc ggtatctatt actggtttga acgaagctcc tatggcaggc gatcactttg
     4501 cagtttacga ggatgagaaa tcagctcgtg cagcaggtga agaacgtgct aaacgtgctc
     4561 ttcttaaaca gcgtcaagca acgcaacgag ttagtcttga aaacctcttt gataccctta
     4621 aagcaggtga ggttaagtca gttaatgtga ttatcaaggc cgacgtacaa ggttctgttg
     4681 aagctcttgc atcatcgctt caaaagattg aagtcgaggg agtacgtgtc aatatcgtcc
     4741 actctgcagt tggtgctatc aatgaatcag atattactct tgcggaagct tcaaatgctc
     4801 ttgtgattgg tttcaacgtt cgtccaacag ctgaagcgcg tagccaagct gaagcagatg
     4861 atgttgaagt acgtcttcac agcatcattt acaaggttat cgaagagatg gaagatgcca
     4921 tgaaaggtat gcttgatcca gaatatgaag aaaaaatcat tggtgaggca atcattcgtg
     4981 aaaccttcaa ggtatccaaa gttggaacga ttggtggttt catggtcgta cgtggtaagg
     5041 ttacccgtga ttcaagtgtt cgagttatcc gtgatggtgt tgtagtattt gatggtaaac
     5101 tagctagttt gaaacgctat aaagacgacg tgaaagaagt tggtaatgcc caagagggtg
     5161 gtttgatgat tgagaactac aacgacttga aagttgatga taccattgaa gcttacatca
     5221 tggaagaaat caaaaaataa tattttctca ctgtcaaagt catagacaag tgattttgtc
     5281 gaggaagtga taatttaata gatttagtag gttttaaaac aatagttttt aatctacttg
     5341 gattattcaa gctggggaaa ctcagctttt ctatcatcta agaaaggaaa gaatatggcg
     5401 aatcattttc gtacagaccg tgtcgggatg gaaatcaagc gtgaagtcaa tgagattttg
     5461 caaaagaaag ttcgtgatcc acgtgtgcag ggagtgacca ttacagatgt tcagatggtc
     5521 ggcgatttat caatggccaa ggtttactac acaatcatga gtaatttggc atccgataat
     5581 caaaaagcac aaacgggtct tgaaaaagcg acgggaacca ttaagagaga acttggtcgt
     5641 aagttaactc tttataaaat tccggatttg gtctttgaaa aagaccaatc aattgagtat
     5701 ggtaacaaaa ttgatcaaat gctccgtgct ctcgaacaga aagattaaga aagtcgaatg
     5761 gaaacattcg gctttttctg ggtacgacga gcatgttgta catctgaggt gaaagttctc
     5821 caagggcacc tgctaacggt aaagccaata gcgactccca agctagacta tcgcgaggta
     5881 gcggataaaa aacggtttga agagagacta ttttacatgc gtacggtgtg tgaaaaaaag
     5941 gtgagcgttt acaagccttt ctaaagatgg tatactaata taaaagagat tgcgtaggag
     6001 gaagttatga aaaagtttat tagtcgtata atgttggtat ccacggttgt gttattagca
     6061 gcatgtcaat ccattcagac caaggaggat gaaacttcca atactagttc atcgagccaa
     6121 gttacaacta gttcggacca acaatctacc tcagagtctt cctcagagac tacatctagt
     6181 tcagactcac aaaccgaagc atcttctaca aatactcagg cgataccgac tgtgtaccag
     6241 tccgttatcg atcgttacca agccaattta ggtcaggttt ctgaagcgat taatcaggac
     6301 gaggttagta gttatctaag tttactgacg agtcaaggcc aagaatacag cggagcattt
     6361 tatagcctat acgatattga tcaaaatggg acagaggaat tgctcatagc cttgaataaa
     6421 tctggtgact atatcctcat tgatctttac acgcagctat ctggggagaa ttttcgttta
     6481 gtagataatt tccgaaatat tggttttgaa attggcccgg atgccattct tcgtccctta
     6541 caggatggaa cctatttatt tgaagggggt ggagtatacc ggatttatca gtacaatgca
     6601 atgattccag gattgaaacg gatttctgaa tcggatacta atcctgaaac atcccccttg
     6661 cttgagttga aaagcttgca ttgggttaag ctatagattt tatcaatgat tattcctagg
     6721 ctgggtttcc cggccttttg tagttcctaa gcactttgag tacatcggta tgtcgtaaat
     6781 cggaggagca agtcctctgt gggcacccac agcccatgaa cccaatagcg actcccaagt
     6841 ctgactatcg tgaggtcgag acctaatact taacaaaaat caaaaatagc gatatgatag
     6901 tattatgaca aaagaattta cccagacaca agttgaagaa ttaaagcaag cacttaaaga
     6961 taaaaataat gctccgcatc atagaaaaat ccaggcactc attctttatt ctgaatgcca
     7021 taatttaaca tccgtagcta aatcagtagg ttttgtccat cagacagtcc gaaacttatt
     7081 gaatcgctat ctaagtggtg gcttagaagc cctcttaaag gaaaatcgtg gtggtcgccg
     7141 ccgttcgtat atgacgcatg aggaggaaga agttttcctt aaagagcatc tctcttcctc
     7201 tttgaatgga gaattcgtta ctgttaacac cctctttaaa gcttatcaag agagagttgg
     7261 gcacaagaca actcgagaag gtttctatgc tctcctgaaa cgtcatggtt ggcgtaaagt
     7321 tagcccacgt ccccaacatc cgaaaaaagc agacgccgaa accattttag cgtctaaaaa
     7381 taaaatcttt attcgaggag agaacgagta agcgctttat tgatggaaaa gaatatcaaa
     7441 aaatccgcct tatgtatcaa gatgaggcgg gttttgggcg tatcagtaaa cttggctcgt
     7501 gttggtctcc taaaggttat cgccctcacg tagcaagtca tcatattcgt gagtaccgct
     7561 attgttatgg agctgtggat gcccatacag gcgactcgtt tttcatcata gcaggcggat
     7621 gtaatagtga ttggatgaat gcatttctac gccaactatc ggcagcttat ccagaagatt
     7681 atattgtttt agtcatggat aatgccatct ggcataaatc tcagacctta aatatcccta
     7741 agaatattga atttaccttc attccaccct acacacctga aatgaatcct attgagcaag
     7801 tctggactga gattcgtaaa cttggtctca agaataaagt atttaggacc ttaaatgagg
     7861 taatcgataa acttcaagag gttattcaaa ccttaaccgc ttatcaactc aaatcaattg
     7921 tagatagaga ctggacttcc gctatttttg attttaactg agtataaaat caaaatgagt
     7981 ataattggaa atttttatat cagatatgta aatttaatga taaactacct aaaaattttc
     8041 tagtttcagt actttgcaaa atgtaatgaa tagttgttgg tagctatgcc ggaacggttt
     8101 gtgaaatttg attctaattt agtataaggc gtatatagcg aataaagtat ctggataggg
     8161 tgaccgttat ccattagtgg ctcagaagtc ggtattgaaa tgtgccatat caaaaccagt
     8221 cctcgctaaa catggactgg cttcttactt agattattat ctagaacgac atgcgttaaa
     8281 aattagttga accgccgttt accgaacggt atgtacggtg gtgtgagagg gggtggtgag
     8341 tagctcttac tcgattttat cctacaccga tgacgataat tccttctaaa ataacaaaaa
     8401 gaagagttaa taaatggtat tttttcatgt gataatcctc acttttattt ttctttattg
     8461 tatgctatta taggatcaaa caaaaattat tcccatatat gcgtgatgga ggaggagaga
     8521 tgaaaaattt tggagaaatt tttaaaaagt ttcgagaatc gagaggatta aaattaaaag
     8581 atgtcgcaaa ggttggtatc tcaacgtctc agctctctcg atttgagaaa ggagagactg
     8641 acttaacgat ttcaaagttc ttactcatat tggatgaaat taacatgccg atcgatgaat
     8701 ttatgtatgc ggttcatgat tttcatagag atgaactaaa tgagctcctg tcaaaagtac
     8761 gttattatgt atctactcgt gatgtcgaag gcatgaaaaa acttctttat tctcagatag
     8821 aatcggagga taaacgggag aaattttatc acatcaatat cattttatta aagattcgcc
     8881 tgcaagatt
//
LOCUS       DBNFCX010000089         8750 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.089, whole genome shotgun sequence.
ACCESSION   DBNFCX010000089 DBNFCX010000000
VERSION     DBNFCX010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 8750)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8750)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8750
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.089"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(81..2699)
                     /gene="alaS"
                     /locus_tag="AC1PJC_001829"
     CDS             complement(81..2699)
                     /gene="alaS"
                     /locus_tag="AC1PJC_001829"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000661542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HIP6620806.1"
                     /translation="MKNLSSAQIRQMWLDFWKSKGHSVEPSANLVPVNDPTLLWINSG
                     VATLKKYFDGSVIPDNPRITNAQKSIRTNDIENVGKTARHHTMFEMLGNFSIGDYFRD
                     EAIEWGFELLTSPEWFAFPKDKLYMTYYPDDVDSYNRWIALGVEPSHLIPLEDNFWEI
                     GAGPSGPDTEIFFDRGTDFDPENIGLRLLEEDIENDRYIEIWNIVLSQFNADPAVPRS
                     EYKELPNKNIDTGAGLERLAAIFQGAKTNFETDLFLPIIREVEKISGKTYDQDGDNMS
                     FKVIADHIRALSFAIGDGALPGNEGRGYVLRRLLRRASMHGQRLGITEPFLYKLVETV
                     GNIMESYYPEVLEKRAFIEKIVKSEEESFARTIHTGSQFAEQLMDKLAAEGKSEIDGR
                     DIFKLYDTYGFQVELTEELAEHRGMTLDIAGFEAAMKEQQDRARASVVKGGSMGMQNE
                     TLAAITEESTFVYGQTALEASLSVIVADNARTEAVSEGQALLVFDQTPFYAEMGGQVA
                     DHGFVKNAAGDIVATVIDVQKAPNGQPLHTVELSASISVGQTYTLEIETKRRKGVEKN
                     HTATHLLHAALHNIIGEHATQAGSLNEQDFLRFDFTHFEAVTAEELRRIEEEVNEQIW
                     NAIPVVTVETDIDTAKEMGAMALFGEKYGKEVRVVTIGDYSVELCGGTHVSNTAEIGI
                     FKILKEEGIGSGTRRIVAVTGREAFLAYRDQEDALKEVAVTIKSPQIKEVPNKVESLA
                     QQVRDLQKENAALKEKAAAAAAGDVFKDVKEANGVRYIASQVQVSDAGALRTFADNWK
                     QKDYSDVLVLVAAIGDKVNVLVASKSSDVHAGNLIKVLAPIVAGRGGGKPDMAMAGGS
                     DASAIQTLLNSVAENL"
     gene            complement(3090..3575)
                     /locus_tag="AC1PJC_001830"
     CDS             complement(3090..3575)
                     /locus_tag="AC1PJC_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LURP-one-related/scramblase family protein"
                     /protein_id="HIP6620807.1"
                     /translation="MKQFQVKQRFTFGGEKFDIRDSFGDLAYQVEGSFLEIPKRFIVT
                     NSRGGEVCQITKKFLTFLPQFTIDMAEGHSFYLQKEFTFFKDRYTVENLGLILDGNIW
                     DLDFRLKRPDGMLVAEISKELFRLTSHYSVTVLEDSYADLVISLVVAIDYIEMMEDAS
                     T"
     gene            complement(3938..4939)
                     /gene="prsA"
                     /locus_tag="AC1PJC_001831"
     CDS             complement(3938..4939)
                     /gene="prsA"
                     /locus_tag="AC1PJC_001831"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase PrsA"
                     /protein_id="HIP6620808.1"
                     /translation="MKQTKKILAGAVTLFAAVTLAACSNAADKDIITMKGDTITVSEF
                     YEKVKTNSQAQQVLLSMVISNVFEEQYGDKVTAKEVDEAYDKMAKQYGDSFATALSSA
                     GLTQETYKEQIRTNKLVEYAVKQAAEKELTDENYKAAYEVYTPEVTARVIKLADEAKA
                     KEVLAAAQAEGADFAQLAKDNSTDTATKDNGGEVKFDSTSTTVPTEVQKAVFALDAGQ
                     VGASIVSAVDLKTYATSYYVVKLEAKSEKSAKWEDYKDKLKEIILAQKQSDSSFVATV
                     LKEALQKANVKVKDSAFQNLLSQYVTTEESSSSSTESSSSSTESSSSTTESSSSSGQ"
     gene            complement(5001..5720)
                     /locus_tag="AC1PJC_001832"
     CDS             complement(5001..5720)
                     /locus_tag="AC1PJC_001832"
                     /EC_number="2.1.-.-"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008171 - O-methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-methyltransferase"
                     /protein_id="HIP6620809.1"
                     /translation="MVESYSKNANHNMRRPVVKEEIVDFMRTRQAQNTGFLKELEEFA
                     RQENIPVIPHETVAYFRLLMQTLQPKRILEIGTAIGFSALLMADNSPHSKITTIDRNE
                     EMIGFAKENFAKYDQRQQIELLEGEAMDILPTLPDDAYDFVFMDSAKSKYIVFLPEVL
                     KKVKVGGLIILDDIFQGGDVAKDIKDVRRGQRTIYKGLQRLFDATLDNPDVTASLVSM
                     SDGLLMLRKNRENVDLKLTEI"
     gene            complement(5795..6343)
                     /locus_tag="AC1PJC_001833"
     CDS             complement(5795..6343)
                     /locus_tag="AC1PJC_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004299013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6630 family protein"
                     /protein_id="HIP6620810.1"
                     /translation="MLTEEQLQDIFELADLMSNGDRELFLQLRDVVFASDPNQILNSI
                     ERILEPDSFDDFLDRVGESEKENLWLILIKLLEHLNYICVRDYKDNLEDFIYFFDRLH
                     QVRNAGISLKLDSDGLNPAASISEWARVVDSKYLDENFCLGAVDMDTDSYYLFFSKQA
                     TFVRLQELAGNLGYRIDYAKNM"
     gene            complement(6354..6800)
                     /locus_tag="AC1PJC_001834"
     CDS             complement(6354..6800)
                     /locus_tag="AC1PJC_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620811.1"
                     /translation="MISYKRSIVVPVAVSIGLILIGIGLMTKPEPAVVSGLCYLLLNI
                     PSALYAYFLRKQGAVFVLNEQYLEYQSKAGGDYQRYSLEEIAEIRYIVSPVYRGYQSK
                     RLRIVGNKGELLAVVNLNKLDGADFNDIYHFVEQVAPHIRWDFSNS"
     gene            complement(6802..8604)
                     /gene="pepF"
                     /locus_tag="AC1PJC_001835"
     CDS             complement(6802..8604)
                     /gene="pepF"
                     /locus_tag="AC1PJC_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004299006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligoendopeptidase F"
                     /protein_id="HIP6620812.1"
                     /translation="MSKQRYEIEEKYQWDLTTIFPTDDAWEAELADLQAETEKTKEFA
                     GHLLDSAKSLLTISETQLGLMRRIEKLYVYASMKNDQDTREGKYQEFQAKAMGLYSVF
                     SQAFAFYEPEFMAITEEQLEAFKAEEPALVQYSHQFEKLLAAKDHVLSQEVEEVLAAT
                     SEIFESPAETFSVLDNASLRFPEIADEDGHLVPLSHGNYIHFMESKNREVRQEAYEAM
                     YGTYEQFQHTYAKTLQSNVKVNNLKARLRKYDSARHASLAANFIPESVYDTLVAAVNK
                     HLPLLHRYINLRKKLLGIDDLKMYDMYTPLSDFSTKISYEDALKKCQETLEIFGEEYS
                     AIVKEAFENRWIDVHVNEGKRSGAYSGGAYDTNAFMLLNWQDNLDNMYTLIHETGHSL
                     HSMLTRKTQPYVYGHYSLFLAEIASTTNENLLTEKLLAEVEDDKERFAILNHYLDGFR
                     GTVFRQTQFAEFEQAIYKADQEGQVLTADFLNELYGQTNEKYYGLSAEENPEIQFEWA
                     RIPHFYYNFYVYQYATGFAAASALANKIVNGSPEDKENYLNYLKAGSSDYSLNVIAKA
                     GVDMTKEDYLNDAFKVFEARLEELEALVEKGVHL"
BASE COUNT         2516 a         1940 c         1701 g         2593 t
ORIGIN      
        1 gaaaataaaa aactaaaatc atgtttttat tataccaaaa actcttctac ccaatggata
       61 aaagagtttt tcagtataga ttataagttt tcagcaacgc tgttcaagag ggtttggata
      121 gcagaagcat cgctaccacc tgccatggcc atgtctggct taccaccacc acgacctgct
      181 acgattggcg caaggacttt gatgaggtta cctgcatgaa catcgcttga cttgcttgcc
      241 acaaggacat tgaccttgtc gccgatggcc gcaaccaaca ccaagacatc agagtagtct
      301 ttctgcttcc agttgtcagc gaaggtacgg agggcacctg cgtctgaaac ttggacctgg
      361 ctagcaatgt agcgaacacc atttgcctct ttaacatctt tgaagacatc tccagcagct
      421 gctgccgctg ctttttcttt cagagctgca ttttcttttt gcaggtcacg aacttgttgt
      481 gcaagacttt caaccttgtt tggcacttcc ttgatctgtg gtgacttgat ggttaccgct
      541 acttctttaa gggcatcttc ttggtcacgg taggcaagga aggcttcacg gcctgttacc
      601 gcaacgatac ggcgagtacc tgaaccgata ccttcttctt tcaaaatctt gaagataccg
      661 atttcagcgg tgttgctaac atgggtacca ccacagagct ccacagagta gtcaccgata
      721 gtaacaacgc ggacttcttt accgtatttt tcaccgaaga gggccatggc acccatttcc
      781 ttggctgtgt caatatctgt ctcaactgtc acaactggaa tggcattcca aatttgctca
      841 ttgacttctt cttcaatacg acgaagttct tccgcagtaa ctgcctcaaa atgcgtaaag
      901 tcaaagcgga ggaagtcttg ctcgttcaag gaaccagcct gtgttgcatg ctcgccgata
      961 atattgtgaa gagctgcatg gagcaagtga gttgctgtgt ggttcttctc aacaccctta
     1021 cggcgttttg tttcgatttc aagtgtgtag gtttgaccaa ctgaaatact tgcggacagt
     1081 tctacggtgt gcaatggctg accattcggt gctttctgca catcgatgac agtcgcaaca
     1141 atgtctccag cagcattttt cacaaaacca tggtctgcaa cctgaccacc catttctgca
     1201 tagaatggtg tttggtcaaa gacaaggagg gcttgacctt ctgagactgc ttctgtacgc
     1261 gcattatcag ccacaatgac agataagctt gcttcaagag ctgtttggcc gtaaacaaag
     1321 gtcgactctt ctgtgatagc agccagggtt tcattttgca tacccattga accacctttg
     1381 acaactgagg cacgggcacg gtcttgttgc tctttcatag ccgcttcaaa accagcaata
     1441 tcaagggtca taccacggtg ctcagccaat tcttctgtca attctacttg gaaaccatag
     1501 gtatcataga gtttgaaaat gtcgcgacca tcaatctcag acttaccttc tgctgctaat
     1561 ttgtccatca attgctcagc aaattgtgaa cctgtatgga tagtacgagc aaatgactct
     1621 tcttcactct taacaatctt ctcaatgaag gcacgttttt caagtacttc tggatagtag
     1681 ctttccataa tattgccaac tgtctccacc aatttgtaca agaatggctc cgtaatgcct
     1741 aaacgttggc catgcataga agcacgacgg agaagacgac gaaggacata accacggcct
     1801 tcatttccag gaagggcacc gtcaccaata gcaaaagaaa gggcacggat gtggtctgca
     1861 ataaccttga agctcatgtt gtcgccatct tggtcatagg tcttaccaga aatcttttct
     1921 acttcacgaa tgattggcaa gaagaggtcc gtttcaaagt tggtcttagc cccttggaaa
     1981 atagctgcca aacgctccaa acctgcgccc gtatcgatgt ttttgtttgg caattccttg
     2041 tactcagaac gcggaacagc tgggtctgcg ttgaactggg acaatacgat attccaaatc
     2101 tcgatgtaac ggtcattttc aatatcttct tccaagagac ggagaccaat gttttcaggg
     2161 tcaaagtcag taccacggtc gaagaaaatc tccgtatctg gaccagaagg acctgcacca
     2221 atttcccaga agttatcttc aagcggaatc aagtggcttg gctcaacacc aagagcaatc
     2281 caacgattgt atgaatccac atcatcagga tagtaagtca tgtagagctt gtcttttgga
     2341 aaagcaaacc attctgggct tgtcaagagc tcaaaccccc actcaatcgc ttcatcacgg
     2401 aaataatcac caatagagaa gttaccaagc atttcaaaca tggtgtggtg gcgggctgtc
     2461 ttaccaacat tctcgatgtc gttggtacgg attgattttt gggcatttgt aatccgtggg
     2521 ttatctggaa tgacagagcc atcaaagtat ttcttgaggg ttgccacacc agagttgatc
     2581 cataaaagag taggatcgtt tactgggaca agatttgctg aaggctcaac agagtgaccc
     2641 tttgatttcc agaaatccaa ccacatttga cgaatttgag cagaagataa atttttcata
     2701 aactaagata ccaagagcgt taagaaagcg agaagaaaat aggagaccaa cgctgtgcgc
     2761 cagcgcacta ggcggtctat ctttttttcg acgcttttag ctcgggttca atttaacgaa
     2821 acagttaaat taaacatttc ctttcatata gtaataattg aggggaaagt ccgtagcccg
     2881 agttcaacta agatactaag ggcgttaagc ggacaccgtc aaaataggaa acctgacgaa
     2941 gacgcttgca tctaggaagt gtttctcttt ttgacaaagt ccgtagcccg agttcatttc
     3001 agaataaact cgataccctt tcctttcata agtgatagtt aggcgggttc aatttaacgg
     3061 accagttaaa ctgaatgatt atttcacgat taagtcgatg catcttccat catttcgatg
     3121 tagtcaattg cgaccactaa ggaaatgacc aaatctgcat aggagtcctc caatacagta
     3181 acggagtaat gagaagttaa acgaaagagt tctttggaga tttcagctac gagcatacca
     3241 tctggtcttt tcaagcgaaa atccaaatcc cagatatttc cgtctaggat taaacctaga
     3301 ttttccacag tatagcgatc cttgaaaaaa gtaaattcct tttgcaagta gaaagaatga
     3361 ccctctgcca tatcaatggt aaactggggc aggaaggtca aaaacttctt agtaatctga
     3421 caaacttccc cacctctgga attggtcacg ataaatcgtt ttggaatttc gaggaaagag
     3481 ccctccactt gataagcaag atccccaaaa ctatcacgaa tatcaaattt ttcaccacca
     3541 aaggtaaagc gctgtttcac ttgaaattgc ttcatgataa cctccaaaaa aaataacaag
     3601 aaaccaaacg aagggcgaaa aaccgcggta ccaccttcat tcaatgactt gtcattctca
     3661 tttcataacc tatattcaca agtgaagcac tcgtatataa gagatagcat ttcgctaatc
     3721 aaagcagttt ttaaggtaat acgactgtat tttgaaaaaa actaacgatg agtagctgaa
     3781 aaactagact tagatataag tactaaacta tgaatacagg ttctcatatt caattgttct
     3841 attaagtagc aagatacttg gcctagatgg ctcgcaacaa ccgccaattt tctgaactaa
     3901 gtaatcaagt atctattctt aataagtaaa acgtcaatta ttgacctgaa gaactagaag
     3961 attctgttgt agaagaagag ctttcagtcg acgaagagct actttccgtt gatgaagaac
     4021 tactttcttc agttgtcaca tattgtgaaa gaagattttg gaaagcactg tctttaacct
     4081 taacgtttgc tttttggagt gcttctttca gcacagtagc aacaaacgat gaatcacttt
     4141 gcttttgcgc caaaataatt tcttttagct tatctttata atcttcccat ttggcagatt
     4201 tttctgactt agcttccaat tttacaacat agtagctagt tgcataagtt tttaagtcaa
     4261 ctgcagaaac aattgaagcc cctacttgac cggcatccaa ggcaaagacc gctttttgga
     4321 cttctgtagg aacagttgtt gaagttgaat cgaatttaac ttcgcctcca ttgtcttttg
     4381 tagcagtatc cgtagagttg tctttcgcca attgagcaaa atctgcacct tcagcttgtg
     4441 ctgctgctaa aacttctttt gccttggctt catctgctaa tttgatgaca cgtgctgtta
     4501 cttctggggt atagacctcg taagccgcct tgtagttttc atctgtcaat tccttctcag
     4561 cggcctgttt tacagcatac tcaaccaatt tattagtacg gatttgttct ttgtaagttt
     4621 cttgagtcaa gccagctgaa gaaagagctg ttgcaaatga atcaccgtat tgctttgcca
     4681 ttttgtcata agcctcatca acttctttcg cagtcacttt gtcaccatac tgctcttcaa
     4741 atacgttact gataaccatt gacaacaaaa cctgttgagc ttgtgagttt gtttttacct
     4801 tctcataaaa ttcagaaaca gtgattgtgt cacctttcat cgtaatgata tctttatcag
     4861 ctgcattgga acaagcagcg agtgttactg cagcaaatag tgttactgca cctgcaagaa
     4921 tttttttagt ttgtttcatt agaaactctc tccttttttt cgttaaccct tttattataa
     4981 cacaaaagct taaaaacttc ttaaatttct gtaagtttta aatcaacatt ttccctattt
     5041 tttctcaaca taaggagacc gtcactcatg gaaacaagac tagcagtcac atctggatta
     5101 tccaaagtcg catcgaataa acgttgcaat cccttataaa tagtgcgctg ccctcttctg
     5161 acatccttga tgtctttggc aacatctcct ccttggaaga tgtcatccaa aatgattaga
     5221 ccgcctactt tgaccttttt caagacttct ggtaaaaata caatatattt cgatttagca
     5281 gaatccatga aaacaaaatc gtatgcgtca tctggtaaag tcggaagaat gtccatggct
     5341 tccccttcca gcaattcaat ctgctggcgc tgatcatatt tggcaaagtt ttcctttgca
     5401 aagccaatca tttcttcatt tcgatcaatc gttgtaatct tcgaatgcgg gctattgtca
     5461 gccatcagta acgcagagaa gccaatagca gttccaattt ctaaaatacg tttaggttgg
     5521 agtgtctgca tcagcaagcg gaaataagct accgtttcgt gagggataac tggaatattt
     5581 tcttgacgag caaactcttc cagttctttc aaaaaacctg tattttgcgc ctgacgtgtt
     5641 cgcataaaat ccacaatttc ttccttgaca accggacggc gcatattgtg atttgcgttt
     5701 ttactatatg attcgaccat agagtccatt atatcataag ccgacaagat tttcttcctc
     5761 aacacactaa aaggtaggtt tccccacctt ttctttacat atttttggcg taatcaattc
     5821 gataccctaa atttccagct agttcttgaa gtcgaacaaa agtcgcttgc ttactgaaaa
     5881 agagatagta actatccgtg tccatatcta ctgcccctag acaaaagttt tcatcaagat
     5941 atttgctatc aacgactctt gcccattctg aaatagaggc agctggattt aatccatctg
     6001 aatccaattt gagagaaatc cctgcattgc ggacttgatg aagacggtca aaaaagtaga
     6061 taaaatcttc aagattatcc ttataatcac gcacacaaat atagttcaaa tgctctagta
     6121 attttatcaa gattaaccaa agattttcct tttcagactc cccaacacga tccaagaaat
     6181 catcgaatga atctggttct aagatgcgtt caatagagtt tagaatctga ttcggatcac
     6241 tagcaaaaac cacatctcta agttggagaa atagctccct gtcaccattt gacatgaggt
     6301 ccgccagttc aaaaatgtcc tgtagctgtt cttccgttaa cataatacct ccattatgaa
     6361 tttgaaaaat cccatcttat atgcggtgct acttgctcta caaaatggta aatatcatta
     6421 aaatctgcac catcaagctt attcaaattg acgactgcaa gcagttctcc cttatttcct
     6481 acaattcgca aacgtttcga ttgatagcca cgatagacgg gagaaacgat gtatcgaatc
     6541 tccgcaatct cttctaacga atagcgctga taatctcctc ctgctttgct ttgatattct
     6601 aaatactgct cattcaagac aaagacagct ccctgtttgc gcaagaaata agcatataat
     6661 gctgacggaa tattcagcaa taaataacac aatcctgaaa ccactgctgg ttccggcttt
     6721 gtcattaagc caattccaat caagatcaaa ccaatactga ctgcaactgg taccacaatc
     6781 gaacgtttat aggaaatcat attagaggtg cacacctttc tcaacgagag cttctaattc
     6841 ttccaaacga gcttcaaata ccttgaaagc atcattgagg taatcttcct tggtcatgtc
     6901 tacacctgct ttggcaatga cattgaggga ataatctgag ctaccagcct tcaagtagtt
     6961 gagatagttt tctttatctt ctggactacc attgacaatc ttgtttgcta gagctgatgc
     7021 tgctgcgaaa cctgtcgcat actgatagac atagaaattg taatagaagt gtggaatacg
     7081 agcccactca aactggattt ctggattttc ttctgcagaa agtccgtagt atttctcgtt
     7141 tgtctgacca tacaattcat tgaggaaatc agccgtcaag acctgacctt cctggtctgc
     7201 cttgtaaatc gcttgctcaa actcggcaaa ttgggtctgg cggaagactg taccacggaa
     7261 accatctagg taatgattta gaatagcaaa gcgttccttg tcatcttcta cttctgccaa
     7321 gagtttttct gtcaaaagat tttcattggt cgttgaagca atttcagcca agaataggga
     7381 ataatgtcca tagacataag gttgagtctt acgagtcaac atagaatgaa gtgagtggcc
     7441 tgtttcatgg ataagagtgt acatgttatc caagttatcc tgccagttga gaagcatgaa
     7501 ggcgttggtg tcgtaggcac ctcctgagta tgctcctgag cgttttcctt cattaacatg
     7561 gacatcaatc cagcggtttt cgaaggcttc ttttacaata gccgaatact cctcaccgaa
     7621 aatttccaag gtttcttggc attttttgag agcatcttca taagaaatct tggtactgaa
     7681 atctgacaat ggtgtgtaca tatcgtacat cttcaagtca tcaataccca ggagtttctt
     7741 acgcaaattg atgtaacggt gcaagagcgg aaggtgcttg ttgactgccg ccactaatgt
     7801 atcgtaaacg gattctggaa tgaaattagc tgcaagtgat gcgtggcggg ctgaatcgta
     7861 cttccgcaaa cgagctttca ggttattgac cttgacatta gactgcaaag tcttagcata
     7921 ggtatgctgg aactgttcgt aggtaccgta catagcctca tatgcttctt ggcggacttc
     7981 acggttttta gactccataa agtgaatgta gttaccgtgt gaaaggggca ccaagtgacc
     8041 atcctcatct gcgatttctg ggaaacgcag gctggcattg tccaagactg agaaagtttc
     8101 agcaggtgat tcgaaaatct cgctggtcgc tgccaatact tcttccacct cttgtgacag
     8161 gacatggtcc ttagccgcta aaagtttttc aaattggtga ctgtactgaa caagagctgg
     8221 ctcctctgcc ttaaaggctt ccaactgctc ttcagtaatg gccataaatt caggctcata
     8281 gaaggcaaaa gcctgtgaaa agaccgaata caagcccatg gctttagctt gaaattcctg
     8341 gtatttgcct tcacgagtat cttggtcgtt cttcatagac gcatagacat agagtttttc
     8401 aatgcgacgc ataagaccaa gttgcgtttc gctgattgtc aaaaggctct tcgctgagtc
     8461 gagcaagtga cctgcaaatt cttttgtttt ttcagtttca gcttgtaaat ctgcaagttc
     8521 tgcctcccag gcatcatcgg ttgggaaaat ggtggtcaaa tcccactggt atttttcttc
     8581 aatttcgtaa cgttgtttag acataattaa tcctccgtat cctttattct aacataaaaa
     8641 atcccctctt tccataggaa agtgagggct tattggttac tattcaactg gaaaacagtt
     8701 tttgccattc gccatcgcaa gtcgccacta ggctaacaaa gtctacaacc
//
LOCUS       DBNFCX010000090         8649 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.090, whole genome shotgun sequence.
ACCESSION   DBNFCX010000090 DBNFCX010000000
VERSION     DBNFCX010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 8649)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8649)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8649
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.090"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..306
                     /locus_tag="AC1PJC_001836"
     CDS             <1..306
                     /locus_tag="AC1PJC_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HIP6620813.1"
                     /translation="VSSILIEFLVLAIVEKQDSYGYEISQTIKIVADIKESTLYPILK
                     KLEKAGYVTTYTQEFQGRKRKYYTITPAGREHLPFLQGEWNSYKDHIDGIIEGSLRK"
     gene            303..1415
                     /locus_tag="AC1PJC_001837"
     CDS             303..1415
                     /locus_tag="AC1PJC_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HIP6620814.1"
                     /translation="MTRADYLNQLEQALFQLHPSARQETLDYFNEYFDEKDNDEEAII
                     ELGTPDEAAKEIIANLPEDALITEKDQASPHSSKPFDFNFDFDFQFDWENFFNNFKHS
                     AYQARERIELTAKIEELPEFSNLQISLEDQALSVQSYDGEAVLLHNPVSEDGSYQAFD
                     YQLVQDSLYISSKPTPNHLYFSNNQISSAILKIPKKLLPLTSLNLKTTDSSLTIVDVQ
                     VCEQLVINAKDSSISMTKVSCPSSALRLEDSTLTISDGQMSELKLEASDAVITLSSMS
                     LSDARITLEDCVWKLKDFVLEKSLNCQAEDSVLTYKPSTDISLDIWEEDSSLKLPKDK
                     AFTMMKEGDITHLSYKQENSPAQLVIHCQDCQLTVG"
     gene            1427..2005
                     /locus_tag="AC1PJC_001838"
     CDS             1427..2005
                     /locus_tag="AC1PJC_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1700 domain-containing protein"
                     /protein_id="HIP6620815.1"
                     /translation="MNRKEYLQKLEKHLKHLPKEDFHDTLDYFNEFFDEKENDEEAIR
                     ELGSPKDAAREILANLYDKEKIEDKPNTSNMVWLTILSILAAPVGIPLAISLVALFII
                     LLVLIFSVFLLLISLWIVLLSLAIAQLLLAFDLFTLSWSTSLLFTGLALICLALTLLG
                     SKFTLDLGSKTFLLVLHWVQRKIRKGGYYETA"
     gene            1992..2846
                     /locus_tag="AC1PJC_001839"
     CDS             1992..2846
                     /locus_tag="AC1PJC_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HIP6620816.1"
                     /translation="MKQLKPFTKISLSLFTLGTILSLIGYFAGGWTNMKTVAENYFQP
                     QTASFTDIRSIEVNEKLSIMPSPDNQFHLHYYRNQHKDIDLLSHQVQDGKLTISSAYQ
                     GIVTYDGLLEPILNLVNDQNVAYYQPVLQVPKNSTIETLSGNLQGDLYLDKVTIQNLE
                     LTVEDGDMLIENSQLSFAHLSHLNGEVAINHSTLISPKDISDTVGSSLTIEDGDFKAE
                     NLKLEGRHNISNYNGSIDISLHPKTKTDIHIDARQNNLGIDLPTYSNPQATNYLYIST
                     LDGELNIR"
     gene            complement(2882..3241)
                     /locus_tag="AC1PJC_001840"
     CDS             complement(2882..3241)
                     /locus_tag="AC1PJC_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HIP6620817.1"
                     /translation="MSIFTTILASIVAIEHLYIMYLETFATHSDSTSRVFNMEKEELQ
                     RKSVTTLFKNQGIYNGLLAVFLIYGIFTGNLEVTTIFVLFVIGAAGYGAATSSPKIIL
                     TQGGPAILALISILLFK"
     gene            complement(3261..3686)
                     /locus_tag="AC1PJC_001841"
     CDS             complement(3261..3686)
                     /locus_tag="AC1PJC_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HIP6620818.1"
                     /translation="MQEMEDLLYRLKVADETISNLFEKQLGISLTRYSILQTLLKDAP
                     LHQLALQERLQIDRAAVTRHLKLLEVSGYIIRKRNPDNQREVLVWPTEQAREALITNP
                     SAHHQAIKTSMNQILTVEESEQFLATLDKLLIGLQNLPI"
     gene            3848..4606
                     /locus_tag="AC1PJC_001842"
     CDS             3848..4606
                     /locus_tag="AC1PJC_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HIP6620819.1"
                     /translation="MENTPKLNLVIDVLMLAGAILAQSGAEIHRVEDTMIRIAHSQGI
                     ERANVLAIPAAIFFSIDHTNISRMKRIVNSNYDMQKVCDVNQISRSLANEEISLEDAW
                     SQLNAIKQQKPPYNNIQITLAAVVAAPFFTIMFGGSLLDAAGAVLATALAFPISLIVE
                     RYIGIDFVTTFVGAFIFSLTSYLLSTTTTLPINPNLINAGAVMPFVPGIAFTNAVRDL
                     MTNHINTGMTKFFQTALIILSLGAGTTVAFMLVR"
     gene            4610..5062
                     /locus_tag="AC1PJC_001843"
     CDS             4610..5062
                     /locus_tag="AC1PJC_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HIP6620820.1"
                     /translation="MTPVNFLLQALASYIAIAAFLIVLNVQRKMLVPGGLLGMLVWLI
                     YLSLLGPTNVLIATFLAAIIGSCISQIMSILLKTPSVIFSLAILAPLVPGYRAYMTTT
                     YFVSGDHAQALTNITTVLTLALVIPIGMASGTILLRLYKVLRTGKKTA"
     gene            5119..6312
                     /locus_tag="AC1PJC_001844"
     CDS             5119..6312
                     /locus_tag="AC1PJC_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HIP6620821.1"
                     /translation="MNQNVTNLKLAERGALLSIGAYIVLSGIKLVAGQLFHSDALRAD
                     AFNNISDIIGNIAVLVGLKMAQKPADTDHKFGHWKMEDLASLITSFIMFVVGFQVLYD
                     TLQKLISNSSIEVDIMGAIVGIFSALVMLAVYLYNNRLANKVRSKALEAAAKDNLSDA
                     VTSIGTSIAIFAAAFNFPIVDKIAAIIITFFILKTAYDIFMESFFTLSDGFDENLLKK
                     YEEDILKLPKIVSVKSQRGRTYGANIYLDVVLEMNPDLSVYESHEVTEQVEQLLTLKH
                     GVFDVDIHVEPSEIPHDEMYEHVYDKLFRFETEIQAHADGYEELIDDQYLLIDAKGRY
                     RNKTQMLADHPIQTTYLSNYQMTSISQKSKLVTFEIGDYVHTSLWRRHENWTVIFHQI
                     SKKQA"
     gene            complement(6493..7323)
                     /locus_tag="AC1PJC_001845"
     CDS             complement(6493..7323)
                     /locus_tag="AC1PJC_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000735768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HIP6620822.1"
                     /translation="MKKMMLGALALVTSLTLAACGSNDSATKSDNWTAYESEKSVTIG
                     FDKTFVPMGFEQTDGSYTGFDIDLANAVFEKYGITVKWQPIDWDLKETELNNGNIDLI
                     WNGYSITDERKEKVLFTNPYMDNQQVLVTKKSSNISQVSDMKDKILGAQAGSSGYSVF
                     ESQPAILKDIVQNNDASQYATFNEALIDLKNDRIDGLLIDRVYANYYLQQEGIIADYN
                     IIDAGFENEAFAVGARKSDTTLVENINKAFAELYKEGKFQEISQKWFGEDVATDAVKN
                     "
     gene            complement(7350..7982)
                     /locus_tag="AC1PJC_001846"
     CDS             complement(7350..7982)
                     /locus_tag="AC1PJC_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015424 - ABC-type amino acid transporter
                     activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HIP6620823.1"
                     /translation="MLELRNLSKRFEDKQIFSNYDLVIPEGKIVAIVGQSGGGKTTLL
                     RMLAGLETIDSGTLMYNGQELPLEELGKRHLLGFVFQDFQLFPHLSVLENLVLSPMKT
                     QNMSRSEAEDKALKLLDTLGLANHATAYPFSLSGGQKQRVALARAMMIDPEIIGYDEP
                     TSALDPELRKEVEKLILENRATGITQIVVTHDMQFAENIADEIIKIEPKH"
     gene            complement(7992..8633)
                     /locus_tag="AC1PJC_001847"
     CDS             complement(7992..8633)
                     /locus_tag="AC1PJC_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004228788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HIP6620824.1"
                     /translation="MDYVLEVLPSLLNGAAVSLQVFFLVLILSLPLGAVFAFLMQIKF
                     KPLQWLLHFYVLIMRGTPLLLQLIFVYYVLPSVGITFDRMPAVILAFTLNYAAYFSEI
                     FRGGIEAIPKGQYEAAKVLKFTPVQTIRYIVLPQVVKIVLPSVFNEIMTLVKDTSLVY
                     ALGVSDLLLASRTAANRDASLAPMFIAGAIYLLMIGAVTLISKQVEKKFDYYR"
BASE COUNT         2683 a         1910 c         1557 g         2499 t
ORIGIN      
        1 gtatcctcta tcttgataga atttctggta ttagccatcg tggaaaagca ggattcctac
       61 ggctatgaaa tcagtcaaac catcaagata gttgctgata taaaggaatc cacactctac
      121 cctattttga aaaaattgga aaaggctggc tatgtcacca cctacaccca agaatttcaa
      181 gggagaaagc ggaaatacta taccatcact cctgctggac gtgaacacct ccccttcctg
      241 cagggtgaat ggaatagcta caaagaccat attgacggaa ttatagaagg gagcttacga
      301 aaatgacacg cgcagattat ttgaaccaac tggaacaagc attatttcaa cttcatccaa
      361 gtgccagaca ggagacttta gactacttca atgagtattt tgacgaaaag gataacgacg
      421 aggaagctat tatagagcta ggaacacctg atgaagcagc aaaagaaatc attgccaatc
      481 tacctgaaga tgccctaatc accgagaaag accaagcaag tccacattca tctaaaccat
      541 ttgatttcaa ctttgatttt gattttcaat ttgactggga gaattttttc aacaatttca
      601 aacattcagc ctatcaagct agggaaagaa ttgaattgac ggcgaagatt gaagaattac
      661 ctgagttttc aaatctacag atttcgcttg aagatcaggc ccttagtgtt caaagttacg
      721 acggagaagc tgtcttattg cacaatcctg tttcagaaga tggtagctac caggcttttg
      781 actatcaact agtccaagat agtttgtaca tatctagcaa gcctacccct aatcacctct
      841 acttctcaaa caatcaaatc agctctgcta ttctcaaaat ccctaaaaaa ctcctgcccc
      901 ttactagtct caatctgaaa acgacagata gtagtctgac aatagtggac gtgcaagtat
      961 gcgaacagct agtcatcaat gcaaaagata gcagtatcag catgacgaaa gtgagctgcc
     1021 caagctctgc tctacggtta gaagactcta cactaactat ctcagatgga cagatgagcg
     1081 agttaaaatt ggaagccagc gatgctgtta tcactctctc aagcatgagc ctttcagatg
     1141 caaggataac attagaagac tgtgtctgga agttgaagga ttttgtcctt gaaaagagcc
     1201 ttaactgcca ggctgaagat tctgtcttaa cctataaacc aagtacagac atcagtttgg
     1261 acatctggga ggaagattct agccttaaac ttccaaagga taaggcgttt acaatgatga
     1321 aagagggtga catcactcat ctcagctaca agcaagaaaa tagccctgct cagctggtta
     1381 ttcattgtca agactgccag cttactgttg gataaaggag gtttccatga atcgcaagga
     1441 atatttacag aagcttgaaa aacatctgaa gcacctgcca aaagaagatt ttcacgatac
     1501 cttggactat ttcaatgagt ttttcgatga gaaagaaaac gacgaggaag caattcgaga
     1561 attgggcagt ccaaaagatg cagcccgtga aattctagcc aatctctatg ataaagagaa
     1621 gattgaggat aagccaaata ccagcaatat ggtctggctg accatcctct ctatccttgc
     1681 cgcacccgtc ggcatacccc tagcaatcag cttggtcgcc ctcttcatca tccttctcgt
     1741 gctcatcttc agtgtcttcc tacttcttat ctcactctgg attgtcctcc tcagtctggc
     1801 aatcgcccag ctactcctcg cctttgacct cttcacacta tcatggtcta cctccctact
     1861 cttcacaggc ctggccctca tctgcttggc cctcactcta ttgggtagta aattcactct
     1921 agaccttgga agcaaaacct tcttgcttgt tttacattgg gtacaaagaa agatccgcaa
     1981 aggaggctat tatgaaacag cttaaaccat ttacgaaaat cagtctgagc ctgttcactc
     2041 ttggaacaat tctcagccta atcggctact ttgctggtgg ttggacaaat atgaaaactg
     2101 ttgcagaaaa ctattttcag ccccaaacgg caagctttac ggatattcgt tctatagagg
     2161 tcaatgaaaa actgtccatt atgccctcgc ctgacaacca attccacctc cactactatc
     2221 gaaatcagca taaggacatc gacctactca gccaccaagt tcaagatgga aaattaacca
     2281 tttctagtgc ctatcaaggc atcgttactt atgatggttt actcgaacct atcttaaatc
     2341 ttgtcaatga ccagaatgtt gcctactacc aacctgtctt acaggtccct aaaaatagca
     2401 caatcgaaac actctcaggc aaccttcaag gagaccttta tctggataaa gtaactattc
     2461 aaaatcttga actcactgta gaagatgggg atatgttgat tgaaaacagt caactcagct
     2521 ttgctcattt gtcacacctc aatggagaag tagcaatcaa tcattccaca ttaataagtc
     2581 cgaaagacat ttccgatact gttggcagta gcttaacgat tgaggatggg gattttaaag
     2641 ctgaaaacct aaaactagaa ggaagacata acatcagtaa ttacaatggt tccattgaca
     2701 tttctcttca tcccaaaaca aaaactgaca tccatataga tgcccgtcaa aataatctgg
     2761 gaattgacct tccaacctat tccaatcccc aagccactaa ttacctctat atctctacac
     2821 tagatggaga actgaatatt cggtaattgc aaaaagccct cctcacggaa ggctttttaa
     2881 cctatttaaa caacaaaata gagatcaatg ccaagatagc tggtccacct tgggttaaga
     2941 tgatttttgg actagaagtc gctgctccgt agcctgctgc tccaataaca aacaagacaa
     3001 aaatagttgt cacttcaagg ttgcctgtga aaattccata gataaggaag acggccaaca
     3061 aaccattata gattccctga tttttaaata gggttgtcac agacttacgt tgtaattctt
     3121 ccttctccat attgaatacg cgactagtag agtctgaatg ggtcgcaaag gtttccaaat
     3181 acatgatata taggtgctca atagctacga tactagctag aatagtggta aaaatagaca
     3241 taatgtctcc tctcaaaaaa ttatataggt agattttgta agccaatcaa cagtttatca
     3301 agagtggcta ggaattgctc gctctcctca acagttagaa tctgattcat cgaagttttg
     3361 atagcttggt ggtgggcaga aggattcgtg attagcgctt ctctagcctg ctcagttggc
     3421 cagacaagta cttctctctg attgtcagga tttcgcttgc gaataatata gccgctcact
     3481 tccaacaatt tgagatgacg cgtaaccgct gcgcggtcta tctgaagccg ctcctgcaaa
     3541 gccaactgat gcaggggtgc atcttttagt aatgtttgca atattgaata gcgtgtcaaa
     3601 ctgattccca actgcttttc aaaaagattg gaaatcgtct catctgccac tttcaatctg
     3661 tataacaaat cttccatttc ttgcattatc tacctctttt gattgattaa tcaatcattg
     3721 ataagtcaat tatactacaa tccgaacaat tttcaactat tttgcctaac tatttaaaaa
     3781 atatgttgtc tacacctata ttttgttata attaagaaaa taactagcag agggatagga
     3841 cttacttatg gaaaacactc ctaaactaaa cttggtcata gatgtgctca tgctcgctgg
     3901 tgccattttg gcacaaagcg gtgcagaaat tcaccgagtt gaagatacca tgattcggat
     3961 tgcacattca caaggaattg aacgggccaa tgtccttgcc atccctgctg ctatcttttt
     4021 ctccatcgac catacgaata tttcgcgtat gaaacgcatc gtaaattcaa attacgacat
     4081 gcagaaagtt tgtgacgtca accaaatctc ccgttcccta gccaatgaag aaatcagcct
     4141 agaagacgct tggagccaat taaatgcaat caaacaacaa aagccacctt ataacaatat
     4201 ccaaataacc ttagctgccg tagtagccgc accatttttt accattatgt tcggaggttc
     4261 tcttttagat gcagcaggtg ctgtcctcgc aacagcttta gctttcccta tctcactaat
     4321 tgtcgaacgc tatattggaa ttgattttgt taccaccttc gttggcgcct ttatcttctc
     4381 acttacctct tacttattaa gcacaaccac tactctcccc attaatccta acctgattaa
     4441 cgcaggggca gtcatgcctt ttgtaccagg gattgctttt acaaatgctg taagagacct
     4501 catgaccaat catatcaata cagggatgac taaatttttc caaacagcgc ttattatctt
     4561 atcgctcggt gcaggtacaa ctgtggcctt tatgcttgtg aggtaatcta tgacaccagt
     4621 taacttctta ttacaggcac tcgcctctta tatcgctatc gcagccttct taattgttct
     4681 caatgttcaa agaaaaatgc tggtccctgg tggactccta ggcatgctag tctggctcat
     4741 ctatctttca ttattaggac caactaatgt actgattgca accttccttg cagcaattat
     4801 cggatcttgc attagtcaaa tcatgagtat tttacttaaa acaccatctg ttattttttc
     4861 acttgctatc ctagcaccgc ttgttccagg ctatcgagcc tacatgacca cgacttattt
     4921 cgtttctggt gaccacgctc aagccctaac caatatcact accgtcttaa ctttagcctt
     4981 agtcattccc atcggtatgg ccagcggaac aatattatta cgcctttata aggttcttcg
     5041 aacaggcaaa aaaacagcct aaccccttga aaataagggg cctttttgtt aaaatgaaaa
     5101 cttatcaaag gagatgctat gaaccaaaac gtaaccaatc taaaacttgc tgaacgtggt
     5161 gccttgctat ctatcggtgc ctatattgtc ttatcaggta tcaaactcgt tgcaggacag
     5221 ctctttcatt cagatgcctt acgagcagat gccttcaata atatttctga tattatcggt
     5281 aatatcgctg tacttgttgg actaaaaatg gcacagaaac cagctgatac cgatcataaa
     5341 tttggacact ggaaaatgga agacttggca agcttgatta catccttcat catgtttgtc
     5401 gttggtttcc aagtactcta tgataccctc caaaaactaa tcagcaattc ttctatcgaa
     5461 gtagacatta tgggggccat tgtcggaatt ttttctgcac tagttatgtt agctgtttat
     5521 ttatataata accgcttggc aaacaaagta cgttccaagg ccttagaagc agctgccaag
     5581 gataatctat ccgatgcagt cacttccata ggaacttcta tcgcaatctt tgctgcggct
     5641 ttcaacttcc ctattgtcga taaaattgca gccatcatca ttaccttctt tatcctaaaa
     5701 acagcctacg atatttttat ggaaagcttc tttaccctat ctgatggatt tgatgaaaac
     5761 ctattgaaaa agtacgagga agatattctc aaactgccaa aaatcgtttc tgtcaaatca
     5821 caacgtggtc ggacttatgg agccaatatc taccttgatg ttgttttaga aatgaatcca
     5881 gacttatccg tttatgaaag tcatgaagtg actgagcagg ttgagcaact cctaacactc
     5941 aaacatggag tttttgatgt ggatattcac gtagaaccat ctgaaattcc acacgatgag
     6001 atgtatgagc atgtgtacga caaactcttc cgttttgaaa cagagataca agctcatgcg
     6061 gatgggtatg aagaattgat tgacgaccag tatctcttaa ttgatgccaa aggccgctac
     6121 cgaaataaaa ctcagatgct tgccgaccac ccaatccaaa cgacgtattt atccaattac
     6181 caaatgacct ccattagcca aaaatcaaaa ctagttacgt ttgaaattgg tgattatgtt
     6241 catacctcac tttggcgccg tcatgaaaat tggactgtta ttttccacca gatctcaaaa
     6301 aaacaagcct agtcgaatga ctggcttttc ctttacctta aattttggtt ttatactcaa
     6361 tgaaaatcaa aagtagccta ggaaacgaag ccgaagatag aactggagtt catcaaggca
     6421 aggtgacaac ggataatttt gattttcgaa gagtattaaa aaaagagcgc atggctcttt
     6481 ttctttatat tattagtttt ttactgcatc ggttgcaaca tcctcaccaa accatttttg
     6541 ggagatttct tggaatttac cttctttata caattcagca aatgccttat taatgttttc
     6601 tacgagtgta gtatctgatt tacgagcacc gactgcgaag gcttcatttt caaaacctgc
     6661 atcaatgatg ttgtaatctg caataattcc ctcttgttgc aagtaataat ttgcatacac
     6721 acggtcaatc aagaggccat caatacgatc gtttttcaag tcaatcaagg cttcattgaa
     6781 ggtcgcatac tgacttgcat cgttattttg aacaatatct ttcaaaatag ctggttgtga
     6841 ttcaaatact gagtaaccag atgaacctgc ttgcgcaccc aaaatcttat ccttcatatc
     6901 agatacttgg ctaatattgg aagatttttt agttacaaga acttgttggt tatccatgta
     6961 gggatttgtg aagagaactt tttccttacg ctcatcagta atagaataac cattccaaat
     7021 taaatcaata ttcccattat tcaattcggt ttctttcaag tcccagtcaa ttggttgcca
     7081 ttttacagta attccatatt tttcaaagac tgcattagcc aagtcaatat cgaaacctgt
     7141 gtaagaacca tctgtctgtt caaatcccat tggaacaaag gtcttatcaa agccaatcgt
     7201 aacggatttt tcagactcgt aggctgtcca attatcagac ttagtagccg aatcattgga
     7261 gccacaagca gcaagagtta aagaagttac aagagcaaga gctccaagca tcattttttt
     7321 aatattcatc atcatatttg ttccttttct tagtgtttcg gttcaatttt gatgatttca
     7381 tctgcgatat tctcagcaaa ctgcatatca tgggtgacca caatttgcgt gattccagta
     7441 gccctatttt caagaatcag tttctcaact tcttttctta attcagggtc tagggccgaa
     7501 gttggttcgt catagccgat aatctcagga tcaatcatca tcgcacgcgc caaagccaca
     7561 cgttgtttct gtccacccga taatgaaaat gggtaggcag ttgcgtggtt agcaagtcca
     7621 agagtatcca agagtttaag ggccttgtct tctgcctctg aacgcgacat attttgcgtt
     7681 ttcataggag agagaaccaa gttttccaat acggataggt gcgggaaaag ctggaagtcc
     7741 tggaagacaa agcccagcaa atgtcgtttt cccaactcct ctaatggcag ttcttgacca
     7801 ttgtacatca aagttcctga atcaatagtc tctaaaccag ccaacatccg taaaagagtt
     7861 gtcttaccac cgccagattg accaacgatg gcaacaattt tcccttcggg aatgaccaaa
     7921 tcatagttgg agaaaatctg tttatcttca aagcgttttg acaaattgcg taactctaac
     7981 atgacttcct cctatctata ataatcaaat ttcttttcta cttgtttcga aatcagtgtt
     8041 accgcaccaa tcatcaatag gtagattgca cctgcaataa acataggcgc caagctggca
     8101 tcacgattgg cagcagtacg actagccaac aacaaatcac taaccccaag tgcatagacc
     8161 aaagaagtat cctttaccaa agtcatgatt tcattgaaaa cacttggcag gacaattttc
     8221 acgacctgtg gtaagacaat atagcgaatg gtctgaacag gggtaaattt caatacctta
     8281 gccgcttcat actgaccttt tggaatagct tcaataccac cacggaaaat ttcagagaaa
     8341 taagccgcat agttgagcgt aaaggccaga atcacagcag gcattcggtc aaatgtaata
     8401 cctacacttg gtaaaacgta ataaacaaaa attaattgta aaagcaaggg ggttcctcgc
     8461 ataattaata catagaaatg caataaccat tgtaagggtt taaatttaat ctgcattaaa
     8521 aaagcgaaaa cagctcctaa tggcaaggat aatatcaata ctagaaaaaa tacttgcaag
     8581 gagactgctg caccatttag tagactgggc agaacttcca aaacataatc catagagctc
     8641 tcctaaaag
//
LOCUS       DBNFCX010000091         8637 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.091, whole genome shotgun sequence.
ACCESSION   DBNFCX010000091 DBNFCX010000000
VERSION     DBNFCX010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 8637)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8637)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8637
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.091"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..225
                     /locus_tag="AC1PJC_001848"
     CDS             <1..225
                     /locus_tag="AC1PJC_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2971 domain-containing protein"
                     /protein_id="HIP6620825.1"
                     /translation="LENEDVNYPDNRKYIHIERSEQGKCNLYAYINVAPLRYSKIMLG
                     PKVENVDYIAPYIHYIQPDIIVETSSIPYR"
     gene            271..366
                     /locus_tag="AC1PJC_001849"
                     /pseudo
     CDS             271..366
                     /locus_tag="AC1PJC_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261961.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UvrB/UvrC motif-containing protein"
     gene            543..6608
                     /locus_tag="AC1PJC_001850"
     CDS             543..6608
                     /locus_tag="AC1PJC_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ZmpA/ZmpB/ZmpC family metallo-endopeptidase"
                     /protein_id="HIP6620826.1"
                     /translation="MKNIFGEKRQRFGFRKLSIGLVSAAVASLFFASSVAAAPSASAQ
                     SINYSYVTEQELTDAEKELIIRDLPGLAQETDANYYLIYRPATGTASTPSTSTSQVLP
                     NTGSVETELLVAGGVSLLLLAVRFGKKGKKELAGVILLTATGASFFGPTSSALTSQIL
                     AQYNHAIEISVGQALPAPAEIDGYVYVGYLKDSKAIEQTTSEEEKTAEFPASEGIRTE
                     TIVNKTEAIPFEIQTVENPQLSAGTERVVQEGQDGERTVTIKQVHSKGQIISEEEISS
                     TVTKTTVPKIVEVGTKKATDDIVTEVPDTAPSHELPTLQITEEVSTYTESIPFETQEV
                     ADDTLLEGTRQIVQEGKAGQKTIETKKTYIDGILVKTETVSETINQPAAPQIIHVGTK
                     PVTSVPDSAPSHEVPTNSLTEETLTHTEAIAFDVQEIYDANLAEGSREVEQKGQAGVR
                     TIETKNYYADGVLIKSEQVSDVVTKAPVTEVVRVGTKTADVLGVETVVATEELPFETT
                     VTETEELYVGEEKVVNEGKVGSKEVTTTYQTINGVRQPNPTVTEKVLEEPTTKEVLKG
                     TKPIEGTETETNQVEIIFETEYVDDPTLLEGKTKVVTAGVNGSKTVTTTYQTIKGVRQ
                     ENPTVTEEITKQPVKQVIARGTKVEKVPQVIITDLVENDDAKSATISYKLTDETANFQ
                     RAVALLYDNTGALVKEQAIDDPNGEITLENLDFYTDYTVKTKIFYTLDEQEQSSEQEA
                     IIESMRKFDLVYKKIEIKDIDAVTVYRRKNGSYIGQEFLEELPTSTDELFIKVTSDRF
                     KEVYLPVSSIEETTLNGKAVFKLVSSFDELVQDKDAQYVANREFYIPKMATDANTYTS
                     FKALIDAMKANPKGTFKLGAHLDASEVPVGDVASYVTNFSGTLDGVNDGYAFSISNLK
                     APLFFNLNGKVQNLNIKNASLNTTSKNPLATIAINANNATITNVAVEASIKGPQNVSG
                     LVHSATNSTIKDVSFKGSIEVTGTDASLTGGILGNGTMASVGNAKVDATITLPGTENQ
                     VAGGIVGRTMLVYDVPGSVYNAYATGSIVTTESAAIVGGIAGANQVTGPYAPYSGNVN
                     NVISDMTGAKSIIGQPANPTGKIKDGFTTTSDSLTNVTVITDEEAQAKVEAMAIQTTI
                     DDSASLNLNQYSVNYLTLDKAQADHETAYYNMEKILPFYNKELLVYYGNKVATDDKLN
                     KVRLLDVVPMKDKDVVADVYAEKANINKIMLHYADGTVDYKTVSYLEDFKNNHVVEYT
                     ISGTDLIYTPESFLNDRSALVNDLVSSLSSVVLDSDAMKAIIKYPTTLNADTQTGTAK
                     DFYFGESYNQVMANLESNVRKILVASLNGQGQASEDYIKEKITNNKEAFVLGLTYLNR
                     WYDINFGEMNTKDLTIFEPDFFGNDAASALDMILAIGNGGYDVLRAHNNVTTFASIIG
                     KQNNQTKLFDMLEDYRQLFLPEMTNNEWFKQTTKAYVVEGKSLIPEVAAKQETTDTYS
                     KYNVGAYSKIVNDTVSNPTWKYNHMLLPLLTLPQENIFIITNMNTIAIGSYEHYVDDY
                     STVENRDKVRQMVDLAAERQRDNADFWYKILDETNRDKLFRSVLNNEGYLMFGPDGTK
                     AYRNLTADVDAIQDFYGPINKWYREHPSIKTAYADGSETYYITYDMLSDYGTALYTHE
                     MVHNQDGDIYLKGYGRRIGQGMEVYAQGLLQNVFNVTEMNLGFNAVYNSDDANRVHVG
                     DPVARFNSEADFNEYYHNQFDVLYLLDYLEGTNILAQSDANKKAWLRKIENYYVQNNG
                     ANTHAGNSARALTDAEVASLKSFNDLIDQSIIVQRQYVNNPTNTSKKWDRNSYVSVPM
                     FAANFSALSNSNGSPGDIMFRRMAFELIAAKGYTDGFVPYASGQLSDLAMEKGSKIYD
                     TWTKKDVGLITDDHVLEYIYQGQYATWADFKKAMFAERLEKVAAGQLKAFTMQYELGV
                     ADSTKEVTITSFEQLQTLMKEAMDADIQANSLNLNNSRVHALKVKVYQALMNSTNDFR
                     TSIFN"
     gene            6686..7189
                     /locus_tag="AC1PJC_001851"
     CDS             6686..7189
                     /locus_tag="AC1PJC_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase family protein"
                     /protein_id="HIP6620827.1"
                     /translation="MMIKPLETKSEMLGKAYVHWKSWQEAYADLLPQEFLKNTYTLER
                     CQDWAVRYPQNILIAVMNDKVVGFACYGSSSQEDLPGAGELYALYVLADYYDQKIGYK
                     LMQAALEKLQSYETVTLWVLEGNARAVAFYEKVGFRFDGVKKTVNLGAERTEYRMILK
                     QKERENG"
     gene            7182..7649
                     /locus_tag="AC1PJC_001852"
     CDS             7182..7649
                     /locus_tag="AC1PJC_001852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase"
                     /protein_id="HIP6620828.1"
                     /translation="MARKEMVTLTNMCLIEDKEGKVVVQIRDPKRYRWSGVAFPGGHI
                     EEGENFHDSVVREVQEETGLTVTDARLVGLKHWPDKEGHRYIVFLYKATEFTGTIRST
                     EEGEVRWVEKSDLPQMDLAYDLLEILKVMDEPDLSEFFYTRKNDDGEWDKNFR"
     gene            7850..>8637
                     /locus_tag="AC1PJC_001853"
     CDS             7850..>8637
                     /locus_tag="AC1PJC_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HIP6620829.1"
                     /translation="MKKYIMTGLVLLATMTLSACSGNATQEDTSLKDVQEKGKLIVAL
                     NPEFPPFEFRTLVDGKDTIVGADIELAKAIGQELGVEVEFSAMSFDNVLNNVQSGQSD
                     IAISGISATEERAKVYDFSIPYYTSTNKVIINKEDLAQYTSLDSLAEANIGAQKGSIQ
                     EQIIKEQLPSSTVIALASNGELINQLKSQKVEAVIFEEPIAKAYVAQNDDLVILDTEI
                     KSSYSDAYAIALPKGSTALKEKVDSVITKLVESGQMDQFVQEAY"
BASE COUNT         2797 a         1627 c         1910 g         2303 t
ORIGIN      
        1 ttagaaaatg aggatgtaaa ttatccagac aacagaaaat acattcatat agagagatca
       61 gaacagggga agtgtaattt atatgcatac attaatgttg ccccactaag atactcaaag
      121 attatgttgg ggccaaaagt tgaaaatgta gactatatag ctccttatat ccattacatt
      181 cagcctgaca ttatcgttga aacttcaagt attccgtatc gataacctct tttgaaaagc
      241 tacgaagaat cgagtcagac cataagtatg aaactggaag gtcaaatgca ggaagctgca
      301 gaagtgcttg actttgaact ggcagcccag attcgtgata tggtcatcga gttgaagaat
      361 atgtagtaag agttgccagg ttccatgatt tttagcagat tgaaattaca agaggtgaca
      421 ggtagaaatt gaccataata cttaaaattt ttacttgggg acttagggac aaaaaatttg
      481 tccctgtccc tataaaaggt tataatggtt tctatactat ttagggaata gggggagttt
      541 ttatgaaaaa tatttttggt gaaaaacgac agcggttcgg ttttcggaaa ttgtcaattg
      601 gacttgtctc ggcagctgta gcaagtttgt tttttgcgtc atcggtggca gcagcaccgt
      661 cagctagtgc tcagtctatc aattattcct atgtgacaga gcaagaattg acagatgcag
      721 aaaaggagtt gattattcgt gacttgcctg gcttagctca ggaaacggat gcaaattatt
      781 acctgatcta tcgtccagct actggcacag catctactcc atcgacaagt acgtctcaag
      841 ttttgccaaa tactggctct gtagaaaccg aactattggt ggcgggtgga gtgtctctcc
      901 tgttattggc tgttagattt ggtaaaaaag gtaagaagga gctggccggt gtcatccttt
      961 tgacagctac gggagcaagc ttcttcggtc caactagctc cgcattgacg agtcaaattt
     1021 tggctcaata taaccatgca atcgaaatat ctgtcggaca agcgttaccg gccccagctg
     1081 agattgatgg ctacgtttat gtaggatatt tgaaggatag caaagctatt gaacaaacta
     1141 cttcggaaga ggaaaaaaca gcggaattcc cagcttcaga aggaatccgt acagaaacca
     1201 ttgtcaacaa gacagaggcc attccatttg aaattcaaac cgtagaaaat ccccaattat
     1261 ctgcggggac agagcgagtg gtacaggaag gacaggatgg ggagcgtact gtaacgatta
     1321 aacaagtcca ttcaaaaggt caaattattt cggaagaaga gatttcctcg acggttacaa
     1381 aaactactgt tccaaagatt gttgaagttg gtacaaaaaa agcaaccgat gatattgtta
     1441 cagaagtacc agatacagcg cctagtcacg agttacctac cttacagata acggaagaag
     1501 tatctaccta cacggagtct attccttttg aaacacaaga agttgctgat gataccttgc
     1561 tagaaggtac aagacagatt gtgcaagaag gtaaagctgg acaaaagaca attgagacaa
     1621 agaaaaccta catcgacggt attttagtaa aaacagaaac tgtctctgaa acgattaacc
     1681 aacctgctgc tccacagatt atccatgttg gaacaaagcc agtcacaagt gtaccagatt
     1741 cggcacctag ccatgaagtt ccaacgaatt ctttaacaga agaaacactt actcatacag
     1801 aagctattgc ctttgatgtg caagaaatct atgatgcaaa cttggcagaa ggcagccgtg
     1861 aagttgaaca gaagggacaa gctggtgttc ggacaatcga gactaagaat tattatgccg
     1921 atggtgtact aattaaatcc gaacaagttt cagatgtagt gacaaaagca ccagtaacag
     1981 aagttgtaag agtcggcacg aaaacagcag atgttcttgg agttgaaacc gttgtcgcaa
     2041 cagaagagct tccgtttgaa acgacagtca cagaaacaga agaactttat gttggagaag
     2101 aaaaagttgt taatgaaggt aaggttggtt ctaaggaagt taccactact tatcagacaa
     2161 tcaacggagt ccgtcaacca aacccaacag tgactgagaa agtccttgaa gagccaacaa
     2221 cgaaagaggt tctcaaagga acaaaaccaa tagaaggtac agaaaccgaa actaatcaag
     2281 ttgaaattat ctttgaaaca gagtatgttg acgacccgac actgctagaa ggtaagacca
     2341 aagttgtaac ggcgggtgta aatggctcta agacagttac aacaacttac cagactatca
     2401 agggggttcg tcaggaaaat cctactgtaa cagaagaaat taccaaacaa cctgttaagc
     2461 aagtcattgc gcgtggtaca aaggttgaaa aagtaccaca agtgattatc acagacttgg
     2521 ttgaaaatga cgatgccaag tcagcaacaa ttagctacaa gttgacagat gaaactgcca
     2581 acttccaacg agctgttgct ctcctctatg ataatacagg tgccttggtt aaagagcaag
     2641 ctattgacga tccaaatggc gaaattaccc tagaaaatct cgacttctac acagactata
     2701 ctgtgaagac caagatattc tataccctag atgaacaaga acaaagttca gagcaagaag
     2761 ccattattga aagcatgcgc aaatttgatt tggtctacaa gaagattgaa atcaaggata
     2821 ttgatgcggt gactgtttac cgtcgtaaaa atggtagcta catcggtcaa gaattcttgg
     2881 aagaactgcc aacatccacc gatgaattgt ttatcaaggt gacttcagac cgtttcaagg
     2941 aagtttacct acctgtgtca agcattgaag aaacaacctt gaatggcaag gcagtcttca
     3001 aactagtttc atcctttgat gaattggtac aggacaagga tgcccaatac gttgccaacc
     3061 gtgaattcta cattccgaag atggcgactg atgcaaatac ctacacatcc ttcaaagctt
     3121 tgattgatgc tatgaaggca aatccaaaag gtaccttcaa actaggagcg catttggacg
     3181 caagtgaagt tcctgttgga gatgttgcat cgtatgtgac caactttagc ggtaccttgg
     3241 atggggtaaa tgacggctat gccttctcaa tcagcaactt gaaagcccca ttgttcttta
     3301 acctcaatgg taaggttcaa aacttgaata tcaagaatgc cagtctaaat acaacatcta
     3361 agaacccact tgctactatt gcgattaatg ccaacaatgc aactatcacg aacgtagcag
     3421 tagaagcatc tatcaaagga ccgcaaaacg tatcaggtct ggttcattct gcaaccaact
     3481 ctactatcaa ggatgtatcc ttcaagggta gtattgaagt aactggaacc gatgcaagcc
     3541 tcactggtgg tatcttgggt aacggtacga tggcaagtgt tggaaatgcc aaggttgatg
     3601 cgaccattac cctcccaggt acagagaatc aagtagctgg tggtatcgtc ggtcgtacca
     3661 tgcttgtcta cgatgtacca ggaagtgtct ataatgcata cgcaactggt tccattgtga
     3721 cgactgaatc ggcagccatt gtcggcggaa tcgcaggtgc caaccaagta actggtcctt
     3781 atgctccata tagtggtaat gttaataatg ttatcagcga tatgactggt gcgaaaagca
     3841 ttatcggtca accagcaaat ccaactggta agattaaaga cggcttcact acaacatctg
     3901 atagcttgac caacgtcaca gtcatcaccg atgaagaagc gcaagcaaaa gtagaagcta
     3961 tggctattca aacgacaatt gatgattctg cttcacttaa tctcaatcaa tattcagtaa
     4021 attatctaac cttggataag gctcaggctg accatgaaac tgcctactac aacatggaga
     4081 aaatcttgcc attctacaac aaggaacttc ttgtttacta tggaaacaag gttgcgacag
     4141 acgataagct caacaaggtc cgtttgctgg atgttgtacc aatgaaggat aaggatgttg
     4201 ttgctgatgt ctacgctgag aaggctaata tcaataagat tatgcttcac tatgcagatg
     4261 gtacagtgga ctataagaca gtttcttatc tagaagactt caagaataat catgtggtcg
     4321 agtacaccat ttcaggtacg gacttgattt acacgccaga atcattcttg aatgacagaa
     4381 gtgcccttgt caatgacttg gtaagcagcc tttcttctgt tgtcctcgac tcggatgcta
     4441 tgaaggcgat tatcaaatat ccaacaacct tgaatgccga tactcagaca ggtactgcaa
     4501 aagatttcta ctttggtgaa agctataacc aagtgatggc caacctagaa agcaacgttc
     4561 gtaagatttt agtggctagt ctaaatggtc aaggtcaggc ttctgaagac tacatcaaag
     4621 agaaaatcac caacaacaaa gaagcctttg tgctcggttt gacttacttg aaccgttggt
     4681 atgacatcaa cttcggagag atgaatacca aagatttgac tatctttgaa cctgacttct
     4741 tcggaaatga tgcagcatct gcccttgata tgattcttgc aattggtaat ggtggctatg
     4801 atgttcttcg tgcccacaac aacgtgacca cttttgcatc catcattggt aaacaaaata
     4861 atcagaccaa gcttttcgat atgctggaag attatcgtca gctcttcttg ccagaaatga
     4921 ccaacaatga atggttcaag caaacaacca aggcttatgt tgttgaaggt aagtccttga
     4981 ttccagaagt agctgctaag caggaaacga cagatacata tagcaagtac aatgttggag
     5041 cttatagcaa gattgtgaat gatactgtat ccaatccaac ttggaagtac aaccacatgc
     5101 tcttgccact cttgactttg ccacaagaaa atatctttat catcactaac atgaatacca
     5161 tcgcgattgg ttcatacgaa cactacgtag atgattattc gacagtggaa aatcgtgata
     5221 aggttcgtca gatggttgat ttggcggcag aacgtcagcg tgataatgca gacttctggt
     5281 ataagatttt ggatgaaacc aaccgtgaca agctattcag atctgttctc aataatgaag
     5341 gctacttgat gtttggtcca gatggtacca aggcttatcg taacttgaca gctgatgttg
     5401 atgctatcca agatttctac ggtcctatca acaagtggta ccgtgagcat ccatctatca
     5461 agaccgctta tgcggacgga agtgagacct actatatcac ttacgatatg ctgtcagact
     5521 atggtacagc cctttatacc cacgaaatgg ttcacaacca agatggtgat atttatctga
     5581 aaggctatgg tcgccgtatt ggtcaaggta tggaagtcta tgctcagggt cttctgcaaa
     5641 atgtcttcaa tgttactgag atgaaccttg gattcaacgc tgtctataat agcgatgatg
     5701 ccaaccgtgt ccatgtcgga gacccagttg cacgtttcaa tagcgaagct gatttcaatg
     5761 agtattacca taaccagttc gatgtgctgt acttgctgga ttacctagaa ggtacaaaca
     5821 tcttggctca atctgatgct aacaagaaag cttggttgcg taagattgaa aactactatg
     5881 tccaaaataa tggtgccaat acccatgctg gaaactcagc gcgtgcattg acagatgccg
     5941 aagttgcaag tttgaagtcc ttcaatgatt tgattgatca gagtattatc gttcaacgcc
     6001 aatatgtcaa caatccaacc aacacaagca agaaatggga cagaaatagc tatgtcagcg
     6061 ttccgatgtt tgcggctaac ttctcagccc tttcaaattc aaacggttca ccaggcgaca
     6121 ttatgttccg tcgtatggcc tttgaattga ttgctgccaa agggtacaca gatggctttg
     6181 taccgtatgc ttcagggcaa ttatccgacc tggccatgga aaaaggttct aagatttacg
     6241 atacatggac taaaaaagat gttggtttga ttacagatga ccatgttctg gaatatatct
     6301 accaaggtca atatgctaca tgggctgact tcaagaaagc catgtttgct gaacgtttgg
     6361 aaaaagtagc agctggccag ctcaaagcat tcaccatgca atatgaatta ggtgttgctg
     6421 actcaaccaa ggaggtaacc atcacaagct ttgaacagtt gcaaaccttg atgaaagaag
     6481 ctatggacgc agatatccaa gcgaacagcc tcaacttgaa caacagtcgt gttcatgcac
     6541 tcaaagtgaa agtttatcaa gctttgatga actctacaaa tgacttcaga acatcgattt
     6601 ttaattaaat aatcataaac aagttggtct tgtgccaact tgttttttaa tgtatactag
     6661 aggaaaaaat tcggaggtac attagatgat gattaaacca ctggaaacga aaagtgaaat
     6721 gctaggcaag gcctatgttc attggaaatc gtggcaggag gcctatgctg acctgttacc
     6781 tcaggaattt ttaaagaata cttacacctt agaacgctgt caagactggg cggttcggta
     6841 tcctcagaat atcttgatag ctgtgatgaa tgataaggtg gttggctttg cctgttacgg
     6901 ctcgtctagt caggaggatt tgccaggggc aggggagctc tacgcccttt atgtcttggc
     6961 ggactattat gatcagaaga taggctacaa gctcatgcag gcagctttgg aaaaattgca
     7021 gagctacgaa accgttactc tctgggtatt ggaggggaat gcgcgtgccg ttgccttcta
     7081 tgaaaaagtg ggcttccgat ttgatggtgt caaaaaaacg gtcaatttag gtgcagaacg
     7141 tacagaatat agaatgattt taaaacagaa agagagagaa aatggctaga aaagaaatgg
     7201 tcactttgac taacatgtgt ctaatcgaag ataaggaagg gaaggtcgtt gtacagattc
     7261 gagatcccaa gcgttatcgt tggtctggtg ttgcctttcc aggtggacat attgaagaag
     7321 gcgagaattt ccatgattcg gttgttagag aagtgcaaga agaaacaggt ttaacagtca
     7381 ctgatgctcg cttggttggt cttaaacatt ggccggataa ggaagggcat cgttacattg
     7441 tatttctcta taaggcaaca gagtttacag gaactatccg atcaactgaa gaaggtgagg
     7501 tacgttgggt cgagaagtcg gacctgcctc agatggattt ggcctatgac ttactagaaa
     7561 tcctgaaagt catggatgag ccagatttgt ccgagttctt ttatactaga aaaaatgacg
     7621 atggagagtg ggacaagaat tttaggtaga agctaggaat agcttctttt ttatgttatt
     7681 tgaataaaaa tacaacaaat gagttgacaa atgtataaaa atgacataaa atgtttttat
     7741 ctttcaaaaa aggagaaaaa atatgcattt tgctacaatg aaagtccgat gttttatata
     7801 aaaaaacggt ataagtatgc acaggattat tttaaaggag aatatgatga tgaaaaaata
     7861 tattatgacg ggattggttt tgttggcaac gatgacccta agtgcttgta gtggtaatgc
     7921 tactcaagaa gatacttctt tgaaggatgt tcaggaaaag ggaaaactaa ttgttgcatt
     7981 gaatccagaa tttccaccat ttgagtttag aacactggtt gatggcaaag atacaatcgt
     8041 tggagctgac attgagcttg caaaagccat tggtcaagaa ttgggtgtag aagtcgaatt
     8101 ttcagcgatg agttttgata atgttttgaa caatgtccag tcagggcaat cggatattgc
     8161 tatttcagga atttcagcca ctgaagagcg tgcaaaagtg tatgattttt ccattcctta
     8221 ctacacctcg accaataaag ttattataaa taaagaggat cttgcacaat atacatcgct
     8281 tgattctcta gctgaggcaa atataggagc acaaaaaggt tctattcaag aacaaattat
     8341 taaagaacag cttccgtcct ccacggttat tgctctagct tcgaacggag agctaattaa
     8401 tcaattaaaa tcacagaagg tagaagcagt tatttttgaa gagccgattg cgaaagccta
     8461 tgttgcccaa aatgatgatt tggttatttt agatactgag ataaaaagta gctattcaga
     8521 tgcctatgct atcgccttgc caaaaggaag tacggcttta aaggaaaaag ttgactctgt
     8581 cattacaaaa ctagtggaat ctggacagat ggatcaattt gttcaagaag cctatga
//
LOCUS       DBNFCX010000092         8052 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.092, whole genome shotgun sequence.
ACCESSION   DBNFCX010000092 DBNFCX010000000
VERSION     DBNFCX010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 8052)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8052)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8052
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.092"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(23..1045)
                     /locus_tag="AC1PJC_001854"
     CDS             complement(23..1045)
                     /locus_tag="AC1PJC_001854"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009730267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HIP6620830.1"
                     /translation="MTVTIDWENLGFSYMKLPYRFIAHFKNGKWSEGQLTEDADLHIS
                     ESSPALHYGQQAFEGLKAYRTKEGKLQLFRPDQNAERLQRTADRLLMEPVPTDLFIKA
                     CKEVVKANADYVPPYGTGGTLYLRPLLIGVGDIIGVKPAEEYIFTVFAMPVGNYFKGG
                     LAPTNFLIQDKYDRAAPNGTGAAKVGGNYAASLLPGQYAKKQGFSDVIYLDPATHTKI
                     EEVGSANFFGITADNEFVTPISPSILPSITKYSLLYLAEHRLGMKAVEREVLVEELDQ
                     FVEAGACGTAAVISPIGGIQIADKLHVFHSETEVGPVTRKLYDELTGIQFGDIEAPEG
                     WIVEVE"
     gene            complement(1156..1773)
                     /locus_tag="AC1PJC_001855"
     CDS             complement(1156..1773)
                     /locus_tag="AC1PJC_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HIP6620831.1"
                     /translation="MKIIKLFFSIKVYLWLVLFFLLLLCGVWGYGYISGEKSNQQEVS
                     VHTAIQSVEQVNELVFLNTAVQKIVTAKNYTVLFGQELPFSEKSALLIIKYKAKFGIK
                     SPVSIEHLSENRYKITLPAFEVIGLELDAEEPYTLYDKSGEILSFATEEIDTAQLITD
                     EFQSAEQETFLADYQEDIKESAKNYYQNLFKAISPEIELEFVFNE"
     gene            complement(1835..4288)
                     /gene="parC"
                     /locus_tag="AC1PJC_001856"
     CDS             complement(1835..4288)
                     /gene="parC"
                     /locus_tag="AC1PJC_001856"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HIP6620832.1"
                     /translation="MSNIQNMSLEDIMGERFGRYSKYIIQERALPDIRDGLKPVQRRI
                     LYSMNKDGNTFDKGYRKSAKSVGNIMGNFHPHGDSSIYDAMVRMSQDWKNREILVEMH
                     GNNGSMDGDPPAAMRYTEARLSEMAGYLLADIEKKTVPFAWNFDDTEKEPTVLPAAFP
                     NLLVNGATGISAGYATDIPPHNLAEVIDAVVYMIDHPTAKLEKLMEFLPGPDFPTGAI
                     IQGADEIKKAYETGKGRVVVRSRCEIEQLKAGKKQIVITEIPYEVNKAVLVKKIDDVR
                     VNNKVPGIAEVRDESDRTGLRIAIELKKDSDEQTILNYLYKYTDLQINYNFNMVAIDN
                     FTPRQVGLQKILSSYIAHRREIIIARSKFDKEKAEKRLHIVEGLIRVISILDEVIALI
                     RASENKADAKENLKVSYDFSEEQAEAIVTLQLYRLTNTDIVTLENEEAALREQIQTLA
                     AIIGDERTMFNLMKKELREVKKQFGNPRLSELQDQAETIEIDTASLIVEEETFVSVTK
                     AGYIKRTSPRSFNASTLEEMGKRDDDQLIFLQNAKTTQHLLLFTNLGNVIYRPVHELT
                     DIRWKDIGEHLSQTLMNFDTNEEIIFAELVENFEEGTYFAVTKYGQIKRVERKEFAPW
                     RTYKSKSTKYAKLKDDKDVVITVSPVVLDDIMLMTEKGYALRFNIEEVPIIGAKAAGV
                     KAVNLKDGDVVAAAFISNTSSVYLLTQRGSLKRMAVEEIPVTSRAKRGLQVLRELKAK
                     PHRVFAAGPVLTDQGDFDLFSTANEDETTSQVLHVQSKTGKLYEVDVTQLSLSERTSN
                     GSFISDTISDEEVFRAWID"
     gene            complement(4489..4941)
                     /locus_tag="AC1PJC_001857"
     CDS             complement(4489..4941)
                     /locus_tag="AC1PJC_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620833.1"
                     /translation="MIKFLRKKLTIEQLKKVPYASQYTEVLRSIWRADVPKYGISSTL
                     QGELLRQLEKLRWEAQANGNVNWCEEHSNYCRFIKETLYKGKVLSSQQKQELVLIMDY
                     LKSCGEYAQAYQENLIDDEELEIEKLAYVDDNLYDRVGDMIAFFYQRT"
     gene            complement(4944..5447)
                     /locus_tag="AC1PJC_001858"
     CDS             complement(4944..5447)
                     /locus_tag="AC1PJC_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YkvA family protein"
                     /protein_id="HIP6620834.1"
                     /translation="MPLRVKLTDRFQKRLSEWARKRKPFKNKQELEEKFDQALKIWQS
                     SKTRQHAENLLSEQGKLEHFLHSTERKLSRMPFGGDKFAAIPGLISMVRSYIRRDYSK
                     LPKGTILAIIGALIYFFSPIDALPDFILGAGLLDDAFVLNACLKLIKTDVDDFRSWQA
                     SQWKVDE"
     gene            complement(5480..6082)
                     /gene="fic"
                     /locus_tag="AC1PJC_001859"
     CDS             complement(5480..6082)
                     /gene="fic"
                     /locus_tag="AC1PJC_001859"
                     /EC_number="2.7.7.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002395946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0070733 - AMPylase activity [Evidence
                     IEA];
                     GO_process: GO:0018117 - protein adenylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein adenylyltransferase Fic"
                     /protein_id="HIP6620835.1"
                     /translation="MVLENKLGIENAAELARLEEQISKKKAAQLFETGQLFQIEVGTF
                     AGLAYIHQALFEDIYDFAGKIRDVNIAKDNFQFAPRIFLEQSLAYIDKLPHETFDEIV
                     EKYADMNIAHPFREGNGRSMRIWLDCMLRDSLGKVVDWNSIDKDEYFNAMVRSHVSTG
                     ELKYLLLQALTEDLGQATYFKGIDHSYFYEGYNLYRTEDL"
     gene            complement(6106..>8052)
                     /gene="parE"
                     /locus_tag="AC1PJC_001860"
     CDS             complement(6106..>8052)
                     /gene="parE"
                     /locus_tag="AC1PJC_001860"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HIP6620836.1"
                     /translation="AKKEIDINNYNDDAIQVLEGLDAVRKRPGMYIGSTDGNGLHHMV
                     WEIVDNAVDEALSGFGDRIDVTINKDGSLSVSDRGRGMPVGMHATGKPTVEVIFTVLH
                     AGGKFGQGGYKTSGGLHGVGSSVVNALSSWLEVEITRDGAVYKQRFEQGGKPVTTLEK
                     IGTAPKSKTGTKVTFMPDDTIFSTTDFKFNTIAERLKESAFLLKQVTMTLTDERTGEQ
                     EEYHYENGVQDFVSYLNEDKETLTPVLYFEGEDAGFQVQVAMQYNDGYSDNILSFVNN
                     VRTKDGGTHETGLKLAITKAMNDYARKTNLLKEKDKNLEGSDYREGLSAVLSILVPEE
                     HLQFEGQTKDKLGSPLARPVVDGIVSDKLTFFLLENGELASNLVRKAIKARDAREAAR
                     KARDESRNGKKNKKDKGLLSGKLTPAQSKNPAKNELYLVEGDSAGGSAKQGRDRKFQA
                     ILPLRGKVINTAKAKMADILKNEEINTMIYTIGAGVGSDFTLEDVNYDKIIIMTDADT
                     DGAHIQTLLLTFFYRYMRPLVEAGRVYIALPPLYKMSKGKGKTEKIAYAWSDGELEDL
                     RKDFGKDFILQRYKGLGEMNADQLWETTMNPETRTLIRVTIEDLARAERRVSVLMGDK
                     VEPRRKWIEDNVKFTLEEATAFTK"
BASE COUNT         2081 a         1903 c         1707 g         2361 t
ORIGIN      
        1 tgcaagtgca agccttctga aattattcta cttcgacaat ccagccttct ggcgcttcaa
       61 tatcaccaaa ctggatacct gttaattcgt catataattt acgagtgaca ggtcctactt
      121 ctgtttcact atggaaaaca tggagtttgt ctgcaatctg gataccacca attggtgaga
      181 taactgcagc tgttccgcaa gctcctgctt cgacaaactg gtctaattct tcgacaagga
      241 cttctcgttc cactgccttc attcccagac gatgctctgc caaatacaag agagaatact
      301 tggtaatgga cggcaagatt gatggcgaaa tcggtgtaac aaactcgtta tcagctgtaa
      361 taccaaagaa attagcagac cctacttctt caatcttggt gtgggtagct gggtccaggt
      421 agatcacatc tgagaagccc tgctttttgg catattggcc cggtaatagc gatgccgcgt
      481 agttgccacc aaccttagct gcccctgttc catttggtgc cgcacggtcg tacttgtcct
      541 gaatgaggaa gttggtcgga gccaaaccac ccttgaagta gttgccaacc ggcatagcaa
      601 aaacggtgaa aatgtactct tctgctggtt ttacgccgat gatgtcgccg acaccaatca
      661 ggagcgggcg gagatagagc gtgccaccag ttccataggg aggaacgtaa tctgcattgg
      721 ctttgaccac ctctttacaa gccttgatga aaaggtccgt cggtacaggt tccatgagca
      781 agcggtcagc agttcgttga aggcgctcag cgttttggtc tggacgaaag agctggagtt
      841 tcccctcctt cgtgcgatag gccttgaggc cttcaaaagc ttgctgacca tagtgaaggg
      901 ctggtgagct ttctgaaatg tgcaggtccg catcttcggt caattgccct tcagaccatt
      961 tgccgttttt gaaatgagcg ataaagcggt aaggtagttt catataagaa aaaccaaggt
     1021 tttcccagtc gattgttact gtcataggta ttctccaaag gtatttttta ctattttact
     1081 acttttgaaa gtgattttca attaaaaatt cagaaaattt tgtgaatata agaaaaagcc
     1141 tggtaaacca gacttttact cgttaaaaac aaactctagt tcaatttcag gagaaattgc
     1201 cttaaacaaa ttttgatagt aattttttgc tgactctttt atgtcttcct gataatctgc
     1261 tagaaacgtt tcttgttctg ctgactgaaa ttcatctgtg atgagttggg cagtatcgat
     1321 ttcttccgtc gcaaaactca atatctcacc actcttatca tataaggtat aaggttcttc
     1381 tgcatctaat tccaatccaa tgacttcaaa ggctggaagg gtaattttgt acctattttc
     1441 agaaagatgt tcaatggata caggactttt aataccaaat ttcgccttgt acttgataat
     1501 taagagggct gatttttctg agaagggcag ttcttgacca aataagaccg tgtagttttt
     1561 agcggtcaca attttctgga cagccgtatt tagaaatacc aattcattga cttgctcgac
     1621 agactgaata gccgtatgga cactcacttc ctgctgatta ctcttttcac cagagatgta
     1681 gccgtatccc catacaccac acaataacag aaggaagaac agaacaagcc atagatagac
     1741 ttttatactg aaaaataatt tgataatttt catagcattt acctctccta cagtatagca
     1801 aaaagactgc tttgcgagca atcttttcat ctttttagtc tatccaggct ctgaagactt
     1861 cctcatcaga aatggtatcc gaaatgaagc tgccgttgct ggttcgttca gacaggctaa
     1921 gctgggtcac atcaacctca tagagtttgc ccgttttgga ctgcacatga agcacttgac
     1981 ttgtcgtttc atcttcattt gccgtgctaa agaggtcaaa atccccctgg tccgtcaaga
     2041 ctggacctgc cgcaaagaca cggtgaggct tagccttgag ttcgcgaagc acctgcaaac
     2101 cacgcttggc acggctggtc acagggattt cctccaccgc catccgcttc aaactaccac
     2161 gctgggtcag gagatagacg gagctggtat tgctgataaa ggccgcagcc accacatccc
     2221 catccttgag gttgaccgcc ttgacaccgg ccgccttggc accgatgatc ggcacttctt
     2281 cgatgttaaa tcgcagagcg tagccctttt ctgtcatgag catgatgtca tccaaaacta
     2341 caggcgatac agtaataacc acatctttgt catctttgag tttggcatac ttggttgact
     2401 tagacttgta agtccgccat ggagcaaact ccttccgctc cacacgtttg atttgaccgt
     2461 atttagtcac cgcgaaataa gttccctcct caaaattctc aaccagttcc gcgaagataa
     2521 tttcttcatt ggtatcaaag ttcataagag tttggctcag gtgttcaccg atgtccttcc
     2581 aacgaatatc tgtcagttca tggacaggcc ggtagatgac atttccaaga ttggtaaaga
     2641 gcaagaggtg ctgggttgtc ttggcattct gtaagaaaat cagctggtca tcgtcccgct
     2701 tgcccatttc ttccagcgtt gaggcattga aagaacgcgg actggtccgt ttgatgtaac
     2761 ctgccttggt cacgctgaca aaagtttctt cttcgacaat caagctggcg gtgtcaatct
     2821 caatcgtttc tgcctgatcc tgcaattcac tcaaacgagg attgccaaac tgtttcttga
     2881 cctcacgcag ttccttcttc ataagattga acatagtccg ctcatcgccg ataatggctg
     2941 ccaaggtctg aatctgctcg cgtagagctg cttcttcatt ctccaaagtc acaatatcgg
     3001 tgtttgtcaa acggtaaagt tgcaaggtca cgatagcctc agcctgttcc tcactgaaat
     3061 catagctgac tttcaagttt tccttggcgt cagccttgtt ttcagaagca cggataaggg
     3121 caataacctc gtccaagatg gaaatgacac ggattaagcc ttctacgatg tggaggcgtt
     3181 tttctgcctt ttccttgtca aacttagacc gggcaatgat aatctcacgg cggtgagcga
     3241 tataactgga cagaatcttc tgcaagccga cctgacgcgg tgtgaagtta tcaatggcca
     3301 ccatgttgaa gttgtaattg atttgcaggt cggtgtattt gtaaaggtag ttgagaatgg
     3361 tttgctcatc gctgtctttt ttcagctcaa tggcaatccg cagacctgta cggtctgact
     3421 catcacgcac ctcggcaatg ccaggcacct tgttgttgac acggacatca tcaatcttct
     3481 taaccagaac agccttgttg acctcataag gaatttcagt aatgacaatc tgtttcttgc
     3541 cagccttgag ttgttcgatt tcacaacggc tacgaactac gacacggccc ttaccagttt
     3601 cataggcctt cttgatttcg tcagcccctt ggataatggc acctgttggg aagtctggtc
     3661 caggcaagaa ctccattagc ttttctaatt tagctgtcgg atgatcaatc atgtagacaa
     3721 cggcatcgat gacctccgct agattatgcg gcgggatgtc agtcgcgtac cctgctgaaa
     3781 ttcctgtcgc tccattgacc aagagattag ggaaggcagc tggtagcaca gtgggttctt
     3841 tttccgtatc gtcaaagttc caggcaaatg gtacggtctt tttctcgatg tcagccaaga
     3901 gatagccagc catttccgaa aggcgagcct cggtgtaacg catagctgct ggcggatcgc
     3961 cgtccatgga accgttgttt ccgtgcatct ccaccaaaat ctcgcggttc ttccagtcct
     4021 gactcatgcg gaccatggca tcataaatag aggaatcacc gtgcgggtgg aaattcccca
     4081 tgatattccc gactgacttg gcggacttac ggtaaccctt gtcaaaggta ttgccgtcct
     4141 tattcatgga ataaagaatc cgacgttgca cgggcttgag accgtcacga atgtccggca
     4201 gggcccgctc ctgaataatg tatttggagt agcgaccaaa acgctctccc atgatgtcct
     4261 caagggacat gttttgaatg tttgacataa attaagatac aaagggacga ttcagtcccg
     4321 tgttcagtta tttctactaa ccgaacattc ctttctttgt ttcttggtgg gaagttaaat
     4381 tttctttctt ttttactttt ttgataatca ccttaagtag tgggaacgga agagagctta
     4441 tatagcaatt tctgttgcga tatccttaac taaacattag ttctttacct aagttctctg
     4501 ataaaagaaa gcaatcatat cccctactct atcataaaga ttatcatcaa catatgctaa
     4561 tttctcaatt tctaattcct catcatcaat taaattttct tgataagctt gagcatattc
     4621 accacacgat tttagataat ccattattaa aactaactct tgcttctgtt gagaagaaag
     4681 gacttttcct ttatagagag tctcctttat gaatcgacag tagtttgagt gctcttcaca
     4741 ccaattgaca ttgccatttg cttgagcttc ccagcgaagt ttttctaatt gtcgaagtaa
     4801 ttcaccttgt aaagtagaag aaatcccgta tttaggcaca tctgctcgcc aaattgaacg
     4861 tagaacctct gtatactgag aagcataagg aactttctta agttgctcga tagttagctt
     4921 ttttcttaaa aactttatca tagctactca tccactttcc actggcttgc ttgccagctt
     4981 ctaaagtcat cgacatctgt tttgattaat ttcaaacagg cattaaggac aaaggcatcg
     5041 tcaagcagac ctgctccaag gatgaaatct ggtaaggcat caataggact gaaaaaataa
     5101 atcaaagcac ctataattgc gaggattgtc cctttgggta acttgctgta atctctacgg
     5161 atatagcttc gcaccatgga aatcaagcct ggaatagccg caaacttatc tccaccaaaa
     5221 ggcatacgag acagtttccg ttccgtgcta tgtaaaaaat gttccaattt tccttgctca
     5281 gatagcaagt tttctgcatg ttgccgcgtt ttggaagatt gccaaatctt caatgcttgg
     5341 tcaaatttct cttccaactc ctgtttattt ttaaatggct tgcgctttcg agcccattca
     5401 gacaaccgtt tttgaaaacg gtcagttaat tttactctta atggcataaa atacctcaca
     5461 tagtttgtct gtgctagatt tacaaatcct cagtacgata taggttgtaa ccctcataga
     5521 aataagaatg gtcgatgccc ttgaaataag tagcctgacc aagatcttcc gttaaggctt
     5581 gcaataacag atatttaagc tctcctgttg acacatggct tctaaccatg gcattgaaat
     5641 actcatcttt atcaatgcta ttccaatcaa ccaccttgcc caaactatcc cgtagcatac
     5701 aatccaacca gatacgcata ctgcgtccat ttccttctcg gaatggatgt gcaatgttca
     5761 tatccgcata tttttcaacg atttcgtcaa aggtttcatg aggtagctta tcaatatagg
     5821 ctaaagactg ctcaagaaag attcgtggag cgaattgaaa attatctttg gcaatgttga
     5881 catcacgaat tttacctgca aagtcgtaaa tatcctcaaa taaagcctga tgaatgtatg
     5941 ccaaacctgc aaaagtccca acttctatct ggaataactg accagtttca aacagttgag
     6001 ctgctttttt cttgctgatt tgttcttcaa gacgggctaa ttcagccgca ttttcaatcc
     6061 ccaatttatt ttctaaaacc atatggcacc tcaacttccc tgagattatt tggtaaaagc
     6121 tgtcgcttcc tccaaggtaa acttcacatt gtcctcaatc cacttgcggc gtggctcgac
     6181 tttatcgccc atgaggacgg atacacggcg ttcagcacgg gctaggtctt cgatggtgac
     6241 acggataagg gtacgggttt cagggttcat ggttgtttcc caaagctgat cggcattcat
     6301 ctcaccaaga cccttgtagc gttgaaggat aaagtccttg ccaaaatcct tgcggagatc
     6361 ttctaattct ccgtcagacc aagcataagc aatcttttct gtcttgccct tgccttttga
     6421 catcttataa agtggcggaa gggcgatgta aacccgtcct gcttctacca atggtcgcat
     6481 atagcgatag aagaaagtca gcaagagggt ctgaatgtgg gcaccatccg tatccgcatc
     6541 ggtcatgata ataatcttgt catagttgac atcttccagc gtaaaatctg acccaacacc
     6601 tgcaccaatg gtgtaaatca tggtattgat ttcttcgttt ttgaggatgt ccgccatttt
     6661 tgccttggcg gtattgataa ccttaccacg caaaggtaga atggcttgga acttgcggtc
     6721 acggccctgt ttggcagagc ctccggctga atctccctcg accagataga gttcattttt
     6781 ggctggattt ttggactggg ctggagttag cttacctgac agaagcccct tgtccttctt
     6841 gtttttctta ccatttcggg attcgtcacg tgccttacgc gcagcctcgc gggcatcacg
     6901 ggccttaatg gcctttcgaa ctagattaga ggctagctcg ccattttcca aaaggaagaa
     6961 ggtcagctta tctgatacaa tgccgtccac cacaggtcgt gccaaggggc ttcccagctt
     7021 gtccttggtc tgcccttcaa actgcaaatg ctcttctggc acaaggatag aaaggaccgc
     7081 agacagacct tcacggtagt cggagccttc caagttcttg tccttttcct tgagcaagtt
     7141 ggtcttgcgg gcgtagtcat tcatagcctt ggtaatggct agtttgagcc ctgtttcgtg
     7201 ggtaccgccg tccttggtcc gaacgttgtt aacgaaggag aggatgttgt ctgaatagcc
     7261 gtcattgtac tgcatagcca cttggacctg gaatcctgca tcttctcctt cgaaatagag
     7321 gacaggtgtc agagtttcct tgtcttcgtt gaggtaggat acaaagtcct gcacgccatt
     7381 ctcatagtga tattcttcct gctcgccagt ccgctcatct gtcaaggtca tggtgacttg
     7441 tttgagcaag aaggctgatt ctttcaggcg ttcggcaatg gtgttgaact tgaaatcagt
     7501 cgttgagaag atggtatcgt caggcataaa ggtaactttt gtacctgttt ttgattttgg
     7561 agcggtacca atcttctcta gggtcgtgac tggctttccg ccctgctcaa accgttgctt
     7621 gtaaacagct ccgtcacggg taatctcaac ttccaaccag ctggacaggg cattgaccac
     7681 cgaagaacca accccgtgga gaccacctga agtcttgtag ccaccttgac cgaacttacc
     7741 acctgcgtgg agaacggtga agatgacttc aactgttggc ttacctgttg catgcatacc
     7801 gacaggcata ccacgtccac ggtcggaaac ggacagacta ccgtccttgt taatagtcac
     7861 gtcaatccgg tcaccgaaac cagacaaggc ttcatcgaca gcgttatcga caatctccca
     7921 gaccatatgg tgcaagccat ttccgtctgt ggatccgatg tacataccag ggcgtttgcg
     7981 aacggcatct aggccttcca atacctgaat ggcatcatca ttgtaattat ttatatcaat
     8041 ctctttctta gc
//
LOCUS       DBNFCX010000093         7796 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.093, whole genome shotgun sequence.
ACCESSION   DBNFCX010000093 DBNFCX010000000
VERSION     DBNFCX010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 7796)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7796)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7796
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.093"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..1612)
                     /locus_tag="AC1PJC_001861"
     CDS             complement(<1..1612)
                     /locus_tag="AC1PJC_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2971 domain-containing protein"
                     /protein_id="HIP6620837.1"
                     /translation="MKYFDMSKTIDQVVTCIGQLEKTELEKELLQFIEEIEEFEKTDS
                     LSEEYIERFFKIVDAFLNVFPVSSGNSQHLKKLLTWLHEKIKTGEVWAEIFYRDSLKI
                     HTYFELLREFIFSSRTYTQIQVFIDKGSIIDTLLKREYRVSNNLTTVNILSLINYLDV
                     FVNVPEIDKEELRSRIYPYIRDLLQYVEDLDETGLYFLLAGNEWIQILDPADLHRINQ
                     YVEINIQDNKLFIQRYLDYLKKLDAEAIAESQQILQDLYKHTDSDIMKSQIIELLDST
                     NSPDSGPHSSEEIVEQIKRTIDEIRSALMIDVNKLKENEFYGHYTKIDTLVNFLFKPE
                     TEENKNRPTYLRLSNANQLNDPMEGKALLAVLGLDRHMEQCYRSTNVFLSSLTVVKDS
                     LPMWKEYAEESRGAFLEYDQNYLETIVKHNVIEFAKVHYITTDENQNIIGDKPVDQKL
                     RYIKDNIERLEEDEATDKIREIIDYIAKISYLFKVSDYQYESEYRILVNLDDTYFTSK
                     FTDRLNSEKVRLTSGEKVSKEVFEKYIKD"
     gene            complement(1627..3612)
                     /gene="uvrB"
                     /locus_tag="AC1PJC_001862"
     CDS             complement(1627..3612)
                     /gene="uvrB"
                     /locus_tag="AC1PJC_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HIP6620838.1"
                     /translation="MINRNTENQFKLVSKYAPSGDQPQAIETLVDNIEGGEKAQILMG
                     ATGTGKTYTMSQVIARVNKPTLVIAHNKTLAGQLYSEFKEFFPENAVEYFVSYYDYYQ
                     PEAYVPSSDTYIEKDSSVNDEIDKLRHSATSALLERNDVIVVASVSCIYGLGSPKEYS
                     DSVVSLRPGQEISRDQLLNSLVDIQFERNDIDFQRGRFRVRGDVVEIFPASRDEHAFR
                     VEFFGDEIDRIREIESLTGKVLGDVDHLAIFPATHFVTNDDHMETAIAKIQAELEEQL
                     KVFEAEGKLLEAQRLKQRTDYDIEMLREMGYTNGVENYSRHMDGRSEGEPPYTLLDFF
                     PEDYLIMIDESHMTMGQIKGMYNGDRSRKEMLVNYGFRLPSALDNRPLRREEFESHVH
                     QIVYVSATPGDYEMEQTDTVVEQIIRPTGLLDPEVEVRPTMGQMDDLLGEINARVEKG
                     ERTFITTLTKKMAEDLTDYLKEMGVKVKYMHSDIKTLERTEIIRDLRLGVFDVLIGIN
                     LLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGRAARNSEGHVIMYADKVTESMR
                     KAMEETARRRQIQMAYNEEHGIIPQTIKKEIRDLISVTKAVTQDKEEVVDFNALNKDE
                     RKAMIKKLEGQMQEAAEVLDFELAAQIRDMVIELKNM"
     gene            3810..6008
                     /locus_tag="AC1PJC_001863"
     CDS             3810..6008
                     /locus_tag="AC1PJC_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding
                     protein/permease"
                     /protein_id="HIP6620839.1"
                     /translation="MKKKLLMLLASILPVFFIFTGVKADDTIDIVFDNAYAPFEFKDS
                     DQIYKGLDVDIINEVAKRSGWTMNQSFPGFDAAVNAVQAGSADALMAGTTITEARKKV
                     FTFSDPYFDTKIVIATTKANTISSYKDLKGKTVGVKNGTAAQNFLEENKDKYGYNVKT
                     FDTGDLMYNSLSAGAVDAVMDDEAVIQYAIQQGQDLSIDIEGEAIGSFGFSVKKGSQY
                     EYLVEDFNKALAEMKKDGTYETIMNKWLGASTTSAESTDYSSRLSLTGNASAKATPVK
                     SSYTIVADSSFAPFEYQDESGNYVGIDMELIKAIAEQQGFTITIQNPGFDAALNAVQA
                     GQADAVIAGMSITDARKEIFDFSNAYYTSNILLAVKNGSDIASYEDLKGKTVGAKNGT
                     ASYSFLEENKSKYGYTLKAFDEASSMYDSLNSGSIDALMDDEAVLLYAIQQGRNFATP
                     IPGEKSGEYGFAVKKGANPELIEMFNNGLAALVESGKYDEILNKYFNSTEEASTTTST
                     VDETTIVGLLKNNYGQLLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSS
                     VFVDVVRGIPLMIVAAFIFWGIPNLIESITGQQSPINDFVAGTIALSLNSGAYIAEIV
                     RGGIQAVPAGQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTTIISA
                     IGLVELFQAGKIIIARNYQSFRMYAILAIIYLVVITLLTRLARKLEKGGK"
     gene            6008..6748
                     /locus_tag="AC1PJC_001864"
     CDS             6008..6748
                     /locus_tag="AC1PJC_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004254183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015424 - ABC-type amino acid transporter
                     activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HIP6620840.1"
                     /translation="MAQLKINVHDLHKSYGKNEVLKGITAKFYEGDVVCIIGPSGSGK
                     STFLRTMNLLETITSGQVTVDGYDLTDPKTDVDAFRSNVGMVFQHFNLFPHMSVLDNI
                     TFAPIEHKLMDKSEAEKVGMELLEKVGLADKRDAMPDSLSGGQKQRVAIARALAMNPD
                     IMLFDEPTSALDPEMVGDVLNVMKDLAEQGMTMLIVTHEMGFARKVANRVIFTDGGEF
                     LEDGTPEQIFDNPQHPRLQDFLDKVLNV"
     gene            complement(6776..7270)
                     /locus_tag="AC1PJC_001865"
     CDS             complement(6776..7270)
                     /locus_tag="AC1PJC_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018379763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HIP6620841.1"
                     /translation="MKKVMIIGCPGAGKSTFSLKLKEITGLPLYHLDQLNWLPDKTTV
                     AREVFQARQEEVLRQEEWIIDGNYRGTYKLRMAACDTILFLDYPEAVCVEGLYSRVGK
                     PRVDIPWVSMTVDEELLEFVKNFRTQVRPNIFNLLSIYKDKNIFIFTSRKEANDYLKQ
                     LKKP"
     gene            complement(7267..7758)
                     /locus_tag="AC1PJC_001866"
     CDS             complement(7267..7758)
                     /locus_tag="AC1PJC_001866"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIP6620842.1"
                     /translation="MAITGIEQADILKIDKQVRLRRYDGQHDFAFEWHQDLELVWLID
                     GDQERYSLDLLNRMYDYLSKNGECYFIEIFEDDQFIPIGDVTLFADDFAIAIGDKRYW
                     KKGIGTKVLHRMIERAREVGLEEILVEEIYDWNLGSRKLFEKCGFEALEKTKKGWSYR
                     LTV"
BASE COUNT         2264 a         1746 c         1413 g         2373 t
ORIGIN      
        1 catcttttat atacttttca aatacttctt tagaaacctt ctcaccactg gttaatctta
       61 ctttctcaga atttaatcta tcagtaaatt tgctagtgaa atacgtatca tctaagttta
      121 ctaggatacg atattcagat tcatactgat aatcagaaac cttaaaaaga taggatatct
      181 tagcaatata atcaataatt tctcgaattt tatcggtagc ttcatcttcc tctaaacgct
      241 caatgttatc tttgatatac cttagttttt gatcaacagg tttatcgcca ataatatttt
      301 gattttcatc tgtagtaata taatgaactt tagcaaattc aataacgtta tgtttgacaa
      361 tcgtttccaa ataattttga tcatattcca gaaaggcacc tctggactcc tcagcatatt
      421 ctttccacat aggcaagcta tctttgacaa ctgtcaagga tgaaagaaat acattagttg
      481 atctataaca ttgttccatg tgcctatcta aaccaaggac ggccagcaaa gcctttcctt
      541 ccatcggatc attcaattga ttagcatttg acaaacgtaa ataggttgga cgatttttat
      601 tttcttccgt ctctggttta aataagaaat taaccaaggt gtctatttta gtatagtgac
      661 cataaaattc attctctttt aatttgttta catcaatcat caatgcggaa cgaatttcat
      721 caatagttct ctttatttgc tcgacaattt cctcacttga atgaggtcca ctatcaggag
      781 agttggttga atctagtaat tctattatct gacttttcat aatatcggaa tccgtatgct
      841 tatacaagtc ttgtagaatt tgttgagatt ccgcaattgc ttctgcatcc aatttcttta
      901 gatagtcaag atatcgttga ataaacagct tattatcctg tatattgatt tctacatatt
      961 gattaattct atgcaagtca gcaggatcta atatttgaat ccattcattg cctgccagta
     1021 aaaaatataa gcctgtttca tccaaatcct caacatattg aagtaaatca cggatatagg
     1081 gatatatccg tgatcttaac tcttctttat ctatttcagg aacatttaca aatacgtcta
     1141 aataatttat cagtgacaat atgttaacgg tagttaaatt attactgact ctatattccc
     1201 ttttaagaag agtatcaata atacttccct tatcaataaa aacttgaatc tgagtatagg
     1261 ttctagagga aaaaataaat tctctaagta attcaaaata ggtatgtatt tttaaagaat
     1321 ctctataaaa gatttccgcc cacacctctc ctgttttaat tttttcatgg agccaagtca
     1381 agagtttctt taagtgttgc gaattcccgg atgatactgg aaatacatta agaaaagcat
     1441 caacaatttt aaaaaaacgt tctatatact cttcggatag agagtctgtt ttctcaaact
     1501 cttcaatctc ttcaataaac tgtaacaact ctttttctag ctctgttttt tccaattgtc
     1561 caatacaggt taccacttga tcaattgttt tcgacatatc aaaatatttc ataactacct
     1621 ccatatctac atattcttca actcgatgac catatcacga atctgggctg ccagttcaaa
     1681 gtcaagtact tctgcagctt cctgcatttg accttccagt ttcttgatca tagccttgcg
     1741 ttcgtctttg ttgagggcat tgaagtccac cacttcttcc ttgtcttgag taacagcttt
     1801 ggttacacta atcaggtcac ggatttcctt cttgatagtt tgtggaatga taccatgttc
     1861 ttcattataa gccatctgga tttgacggcg gcgggctgtt tcttccatag ccttgcgcat
     1921 agactcggta accttgtccg catacataat cacatgaccc tcagagttac gagctgcccg
     1981 accgattgtc tggatgagcc cccgttcatt acggaggaag ccttccttgt cagcatctag
     2041 aatagcaacc agactgactt ctggcacgtc aatcccttca cgcaagaggt taatccctat
     2101 caagacatca aagacaccca aacgcaaatc acggataatc tccgtccgct ccaaggtctt
     2161 gatgtccgaa tgcatatact tgaccttgac acccatttct ttcaggtagt cggtcaagtc
     2221 ctctgccatt ttcttggtca gggtggtaat aaaggtccgc tcgcctttct caacacgggc
     2281 attgatttca cctaaaaggt catccatttg acccatggtt ggacggactt ccacctctgg
     2341 atccaaaagc cctgtcggcc gaataatctg ctcgacaacg gtatcggtct gctccatttc
     2401 atagtcaccc ggcgtcgcag atacatagac aatctgatgg acatggctct caaattcttc
     2461 cctgcgcagc ggacggttgt ccagtgcact cgggagacgg aaaccatagt tgaccaacat
     2521 ctccttgcgt gagcggtcac cattgtacat ccccttaatc tgccccatgg tcatatggct
     2581 ctcgtcaatc atgatgagat aatcttcagg gaaaaagtcc agcagtgtgt acggaggctc
     2641 gccctcgctt cgcccgtcca tgtgtcgtga atagttctca actccgttgg tatagcccat
     2701 ttcccgtagc atttcgatgt cgtagtcggt tcgttgtttc aatcgctgag cttctaagag
     2761 ttttccttct gcctcaaaga ccttgagctg ctcttccagt tccgcctgaa tcttggcaat
     2821 agccgtttcc atatggtcat cgttagtcac gaagtgggtg gcagggaaaa tcgccaagtg
     2881 atccacatcg cccaaaacct tacctgtcag gctttcaatc tcacgaatgc ggtcgatttc
     2941 atccccgaaa aactccacac ggaaggcatg ttcatcacga gaagccggga aaatctccac
     3001 cacatctcca cgtacacgga aacgtccccg ttggaagtcg atgtcgttgc gctcaaactg
     3061 aatatctacc agagagttga gcaactgatc acgggaaatc tcctgacctg ggcgcagact
     3121 gaccacgcta tctgaatatt ccttgggtga acccaaaccg tagatacaag aaacagaagc
     3181 cacgacaata acatcgtttc gctccagcag ggctgaggtc gctgagtgac ggagtttgtc
     3241 aatctcatca ttgaccgaac tgtccttctc gatataggtg tcgctggacg gaacataggc
     3301 ttctggctga tagtaatcat agtaagacac gaagtattct accgcatttt ctgggaagaa
     3361 ttccttgaac tcactgtaga gctgaccagc tagggtcttg ttgtgggcga tgactagggt
     3421 cggcttattg acacgggcga tgacctgact catagtatag gtcttaccag tacccgtcgc
     3481 ccccatgaga atctgagctt tttcgccccc ctcgatatta tcaaccaagg tttcaatggc
     3541 ttggggctgg tcaccagacg gtgcatattt tgacacaagt ttaaattggt tttcagtatt
     3601 tcgattgatc atactcctat tttatcataa gttcgactaa tggagaaaca ttctaaacca
     3661 ttcacaacta tgtccaaaat attaaatttt ctcacatttt aatgactttg catgtcagaa
     3721 attctaacat tataaaaacc tcgattttgc attaattttc agaatatgat atactaggac
     3781 agttatttta taatagaagg agtatggaaa tgaagaaaaa attactcatg ttattggcaa
     3841 gcattttgcc tgtattcttt atttttactg gcgttaaagc tgacgatact attgatatcg
     3901 tatttgacaa tgcttacgcc ccattcgagt ttaaagactc agatcaaatt tataaaggat
     3961 tagatgttga catcatcaac gaagtagcca agcgctcagg ttggaccatg aatcaaagct
     4021 tcccaggatt tgatgcagct gtaaacgctg tacaggctgg atctgcggac gccctaatgg
     4081 caggtacaac tatcaccgaa gcgcgtaaga aagtatttac tttctcagac ccttacttcg
     4141 acaccaaaat cgttatcgct accacaaagg caaataccat ctcttcatat aaggacctta
     4201 aaggcaagac tgtcggcgtc aaaaacggta ccgcagccca aaacttccta gaagaaaaca
     4261 aagacaagta cggatacaac gtaaaaactt ttgatactgg cgatttgatg tataatagcc
     4321 tttctgctgg tgctgttgat gcagtcatgg acgacgaagc agttattcaa tacgctatcc
     4381 aacaaggtca agacctaagc attgacatcg aaggcgaagc catcggttca tttggtttct
     4441 ctgtaaaaaa aggtagccaa tatgaatatc ttgttgaaga ctttaacaag gctttagctg
     4501 agatgaagaa agatggcacc tacgaaacaa tcatgaacaa atggttagga gcttctacca
     4561 cttctgccga aagtacagat tactcgtctc gtttaagctt gacaggaaac gcatcagcta
     4621 aagcaacacc tgtcaaatca agctacacaa ttgtggcaga ttcttctttt gctccatttg
     4681 aataccaaga tgaatcaggt aactatgtcg gaatcgatat ggaattaatc aaggcaatcg
     4741 ctgaacaaca aggatttact attaccattc aaaaccctgg tttcgacgct gcactaaatg
     4801 ctgttcaagc tggacaagct gatgcagtta ttgccggtat gtctatcaca gacgctcgta
     4861 aggaaatctt tgacttctca aacgcctact atacttcaaa catcctatta gctgttaaaa
     4921 atggtagtga catcgcttct tacgaagact taaaagggaa aactgttgga gctaaaaatg
     4981 gtactgcttc atatagtttc ttagaagaaa acaagtcaaa atatggttac accctaaaag
     5041 ccttcgacga agcttcaagt atgtatgaca gtttaaactc tggttctatt gatgctctta
     5101 tggatgacga agcggttctt ctatatgcca tccaacaagg tcgcaacttt gcaacaccaa
     5161 ttcctggcga aaaatcaggt gagtacggat ttgctgttaa aaaaggtgcc aacccagaat
     5221 taattgaaat gtttaacaac ggcttagctg ccctagttga atcaggcaag tatgatgaaa
     5281 tccttaataa gtatttcaac tcaactgaag aagcaagcac aacaacttca accgttgatg
     5341 agacaacaat tgttggtctt ttgaaaaaca actacggtca attgctctca ggtcttggta
     5401 tcacaattgg acttgccctt ctatcatttg ctattgcaat tgtgatcggt attatcttcg
     5461 gtatgtttgc tgtcagccct gttaaagcac tccgtgttac ttcatctgtt tttgtagatg
     5521 ttgttcgtgg tattccgctc atgattgtcg ctgcattcat cttctggggt attccaaact
     5581 tgattgaatc aattactggc caacagtcac cgatcaatga ctttgtcgct ggtaccattg
     5641 ccctatccct caactctggt gcctatattg ccgagattgt tcgtggcggt attcaggcag
     5701 ttccagctgg tcagatggag gcatctcgca gtttgggtat ttcctacgga acaaccatgc
     5761 gtaagattat cctacctcaa gctggtaaaa ttatgttgcc taactttatc aaccagtttg
     5821 ttattactct gaaagatact actatcattt ctgcgattgg tttggtcgaa ctcttccaag
     5881 caggaaaaat cattattgct cgtaactatc aatccttccg tatgtatgca attcttgcca
     5941 tcatttactt ggtagttatc acactcttga ctcgcttagc acgcaaactc gaaaaaggag
     6001 gcaaataatg gctcaattaa aaatcaacgt ccatgactta cacaagtctt atggtaaaaa
     6061 cgaggtcctc aaaggtatta ctgctaagtt ctatgaaggc gatgttgttt gtatcatcgg
     6121 tccttctggt tcaggtaaat cgaccttcct tcgtacaatg aacttacttg aaaccattac
     6181 aagtggtcaa gtaacagtcg atggatatga cttaaccgat cctaagacag atgttgacgc
     6241 cttccgttca aatgtcggaa tggtattcca acacttcaac ctcttccctc atatgtctgt
     6301 acttgacaat atcacatttg cgccaatcga acacaaattg atggacaagt ctgaagctga
     6361 aaaagtcggc atggaattat tggaaaaagt tggattggca gacaaacgcg acgctatgcc
     6421 agacagcctt tcaggtggtc agaagcaacg tgttgccatc gctcgtgccc tcgctatgaa
     6481 cccagacatc atgctttttg acgaaccaac ttctgccctt gaccctgaaa tggtcggcga
     6541 tgtactcaac gttatgaaag acttggcaga acaaggtatg accatgttga tcgttaccca
     6601 cgagatgggc tttgcccgca aggttgctaa tcgcgttatc ttcactgatg gcggtgagtt
     6661 ccttgaagat ggcacaccag agcaaatctt tgacaaccca caacatccac gtttacaaga
     6721 cttccttgat aaggtcttga acgtgtaagc taaacgaaaa gcctttgact agcagtcaag
     6781 gctttttgag ttgcttcaaa taatcatttg cctcttttct ggaggtaaat ataaaaatat
     6841 tcttgtcctt atatatggat agtagattga aaatattggg gcggacctgc gttcgaaaat
     6901 tctttacaaa ctctaataat tcttcatcga cagtcatcga aacccacggt atatccactc
     6961 tcggtttgcc aacacgactg tatagacctt ccacgcacac tgcttctggg taatctaaaa
     7021 atagtatcgt atcacaagcc gccattcgaa gtttataagt ccccctataa ttaccatcaa
     7081 taatccactc ttcttgcctt aatacttcct cttgacgagc ttgaaaaact tctctagcaa
     7141 ctgttgtctt gtccggtaac cagtttaact gatccaaatg atagaggggc aatcctgtaa
     7201 tttctttcaa tttcagtgaa aaggtcgatt ttccagcacc agggcaacca ataatcatta
     7261 ctttcttcat actgttaacc tataggacca acctttcttg gtcttttcaa gagcttcaaa
     7321 gccacatttc tcaaatagct ttcgtgaacc aagattccaa tcgtatattt cttcgacaag
     7381 tatttcctca agacccactt cccttgcacg ctcgatcatt cgatgtaaca ccttagtccc
     7441 aattcccttt ttccaatacc gcttatctcc aatggcaatg gcaaaatcat ctgcaaacag
     7501 cgtcacatca ccaattggga taaactgatc gtcttcaaaa atttcaataa agtaacattc
     7561 gccattttta gacaaataat catacatacg attgagcaag tcaagactat aacgttcttg
     7621 atcaccatca atcagccaga ccaattctag atcttggtgc cattcaaaag caaaatcatg
     7681 ctgaccatca taccgacgta aacggacttg tttgtctatt tttaaaatat ctgcttgctc
     7741 aattccagtg attgccattt cggatcctct ctcatttaca ataagttcat tttaac
//
LOCUS       DBNFCX010000094         7788 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.094, whole genome shotgun sequence.
ACCESSION   DBNFCX010000094 DBNFCX010000000
VERSION     DBNFCX010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 7788)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7788)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7788
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.094"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(29..970)
                     /locus_tag="AC1PJC_001867"
     CDS             complement(29..970)
                     /locus_tag="AC1PJC_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein CoiA"
                     /protein_id="HIP6620843.1"
                     /translation="MLVALDEDGQVFNVLENPAPQGRYSCPGCGGLVRYKSGKVLRSH
                     FAHVTLRDCHYFSENESAQHLSLKSCLYSWLINDEQVELEKCLPSIGQVADLFVNDRL
                     ALEVQCSSLPISRLQVRTQAYHEAGLQVLWLLGKGLWLKERLSKLHKQFLSFSMNMGF
                     YLWELDDEKKELRLRYLIHEDLRGKVHCLTKVFPFGEGNLLYILRLPFAKQALSHLTC
                     PLDRDLPRYIAQQLYYKSPNWLALQAESYSRGENLLTKTAEEWYPHIRLPRSTIGFAQ
                     IQKDLTLVYQDFDQYYGNIEDKQKQVLYPPIIYRKPM"
     gene            complement(1031..3034)
                     /gene="metG"
                     /locus_tag="AC1PJC_001868"
     CDS             complement(1031..3034)
                     /gene="metG"
                     /locus_tag="AC1PJC_001868"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HIP6620844.1"
                     /translation="MTKTPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEV
                     FYLTGLDEHGQKIEEKAKEAGLTPQAYVDGMAVGVKELWNLLDISYDKFIRTTDDYHE
                     EVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEFFTESQLEEVFRDENGKVIGGIAPSGH
                     EVAWVSEESYFLRLSKYQDKLVEFFNAHPDFIQPDGRLNEIMKNFIEPGLEDLAVSRT
                     SFTWGVPVPSNPKHVVYVWIDALLNYATALGYGQEETANYDKFWNGTVYHMVGKDILR
                     FHSIYWPIMLMMLDMKLPDRLVAHGWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRY
                     YLMRSLPVGSDGTFTPEDYVGRINYELANDLGNLLNRTVAMINKYFGGQVPTFVANVT
                     DFDADLAAVVAENLASYHKYMEAVDYPRALEAVWNIISRTNKYIDETAPWVLAKEEAD
                     RDKLAAVMAHLTAGLRVVAHLIQPFMMTTSNAIMEQLGLGTAFDLENLAFAGLPAGLT
                     VVAKGTPIFPRLDMEEEIAYIQAQMGGSSAISQEEEKEWNPADVELKNEKAAIKFEDF
                     DKMEIRVAEVKEVAKVEGSDKLLKFRLDAGDGQDRQILSGIAKYYPNEQELVGKKVQI
                     VANLKPRKMMGLLSQGMILSAEHGDNLTLLTVDPSVPNGSQIG"
     gene            complement(3147..4187)
                     /locus_tag="AC1PJC_001869"
     CDS             complement(3147..4187)
                     /locus_tag="AC1PJC_001869"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620845.1"
                     /translation="MPFISEKIDQHIENEGGSLRFFKKGTGQAQTIQQKPYSPCFKDF
                     YVAMGRFIGKDFQSNYTKTYRCWMLVEVLQNYALGLLFTVAVISFVVALIVQFVFQGE
                     FWLPELAEVVIVIVILPIFGQISHNWFLNPWVNLYFENAYHKALAKKQSRPFKSRWSW
                     TLPITVIVILVVGILTSSWIGVLTALVVMLFLIPLSWLEGFFALLFFHFLDQLFSKVN
                     TKKVEKPRFELPAQVHQQLKERFCLLYQDFQKGQYTDAYNGFDHSQKTREEFNQKIQN
                     FLTEQGLTGFHLEPFEESEIAITCVSEDRFEATLFLEDKEAQDFSEFYLICQVRYEKE
                     RITGIDLVEIGY"
     gene            complement(4241..4861)
                     /locus_tag="AC1PJC_001870"
     CDS             complement(4241..4861)
                     /locus_tag="AC1PJC_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3885 domain-containing protein"
                     /protein_id="HIP6620846.1"
                     /translation="MELNQWLKSFQLKDNRLVGPFFYGTPLALRFEIGPADEAEELSR
                     AIYLERAYARAVELFEQASSEYDYVLLSLLRQEDRDIDTYLWHFSSKFNFNKVPEPEL
                     IEVEDWTGDALVFERYLFPVTDQDLKALLREIVKADHGGFNYLSSSVLFLSSQDNIIY
                     HCYDDRGVDIAVLADDKRLELFTDCHDLLFDYDMEEMERRIASLGK"
     gene            4984..5859
                     /locus_tag="AC1PJC_001871"
     CDS             4984..5859
                     /locus_tag="AC1PJC_001871"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HIP6620847.1"
                     /translation="MKTEFINEKAQSAFNLNIITSPIIAIILLLVGDSLGAVIFTPIS
                     FLLPFSETLSVSFELFAFAFISLMVILWARYIEKSPWVGLGFTKKGAGKDFLLGWGIG
                     AAMLTTCTLIMWGLGAIEFTSIQFSTKLVGEFIILILAWSIQGTTEEILTRGWMFSSL
                     SAKHNIPIGIIVSSLFFTFLHLGNNAISLIPILDLTLFAVLACLIMLKTGNIWVIGGL
                     HAAWNCFQGNVFAFPVSGTDAGQAFVQIGITGPEWLSGGRFGVEGSVISLLVQGIMIS
                     WLVYDLYFKPKTSSL"
     gene            complement(5877..6713)
                     /locus_tag="AC1PJC_001872"
     CDS             complement(5877..6713)
                     /locus_tag="AC1PJC_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF975 family protein"
                     /protein_id="HIP6620848.1"
                     /translation="MRTNDIVSRAMMTRERTRGTTLLFLPSILLSIIYAIPVTIFRLL
                     TFLELRQNSAFVEGRLVSSIRLTYLGKFSFALLLQLFIGLSCFHLLELLRGDRQEFSL
                     KDSFSFLKTEWKKPIWTTFLYYYLLLFMAGLPANLGAALFIKGFTMSSLMVLSPGAMA
                     ELAVHQPSQLMKIGAPIFLLGMIIYLFVYYTYSQVVFVLYDHLDNASYTGPLAVFRES
                     RFLMKGNYWQRIWLDLSFLGWFIGELLTLHLLSFFVTPYYHLSRTIFYEKLKKQRLSA
                     VE"
     gene            complement(6906..>7788)
                     /locus_tag="AC1PJC_001873"
     CDS             complement(6906..>7788)
                     /locus_tag="AC1PJC_001873"
                     /inference="COORDINATES: protein motif:HMM:NF017927.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF975 family protein"
                     /protein_id="HIP6620849.1"
                     /translation="MSNSDIRAKATVIREQTDGMITLFLAPVLISFLSGVAEFGLKQI
                     WGQTGTFSWGTTIVKDGVTWTHNFISVGPSIIFDFIAQCLIVTACFQLIRLVRKQRTK
                     VSFTECFTLLDGKNFLPVFSTTLLKMLVLYLASFPAVLGMILIGLAFYSTIVIFGAPI
                     DYQPDFSAFFSSSYFQTGLILVWVGIICSLFVGYGLSQVSFLLYDYLENNTYSSPFKL
                     FSQSWQLMKGNKWRRFLLDLSFVGWFIGVLLTFGFLGLYVYPYYWTCQTIFYEDLKSK
                     NPLVFSTYKSAISSTVA"
BASE COUNT         2366 a         1777 c         1504 g         2141 t
ORIGIN      
        1 tatatacacc tccatcagct atctctattt acattggttt tctataaatt ataggtggat
       61 atagaacctg tttctgcttg tcttcaatat tgccgtaata ctggtcaaaa tcctgataaa
      121 ctagggttaa atctttttgt atttgggcaa agccaatggt agagcggggc agacggatgt
      181 ggggatacca ttcttctgcc gtctttgtca gcaaattctc ccctcggcta taagactctg
      241 cctgcagggc taaccaattg ggggatttgt aataaagctg ttgagcaatg tagcgaggca
      301 aatccctatc taacgggcaa gtaagatgcg ataaagcttg cttggcaaaa ggcagacgca
      361 agatgtacaa taaatttccc tcgccaaatg gaaaaacctt tgtcagacag tggaccttac
      421 ctcgtaagtc ttcgtgaata aggtaacgaa gacgcaattc ttttttctca tcatccaatt
      481 cccagaggta aaaacccatg ttcatactaa aagagagaaa ttgcttgtgt aatttgctta
      541 atctttcttt taaccatagg ccttttccca acagccagag aacctgaaga ccagcttcat
      601 gataggcttg cgtccttacc tgcaaacgag aaatgggtag actggaacac tgtacttcca
      661 aggctaaacg atcattgaca aataaatcag cgacctgccc tatactaggc aggcattttt
      721 caagttcaac ttgttcgtca ttgattaacc aactgtacag acaagactta agtgacaggt
      781 gctgggctga ctcattctca gaaaaatagt ggcagtcccg cagggttaca tgggcaaagt
      841 gcgaacgcag aacttttccg gatttgtatc ggaccagtcc tccacaacct ggacaagaat
      901 agcgaccttg cggcgcagga ttttccaaga cattaaaaac ttgtccatct tcatcaagtg
      961 caactaacat aaaacctcct ctctttatta gttcgcaaaa aaacacccag ctgtgctgag
     1021 tgttgtgaat ttacccaatc tgactgccgt ttggcacaga tggatcgact gttaagagtg
     1081 ttaaattgtc accatgttcg gctgagagga tcatgccctg gctgagtaag cccatcatct
     1141 tacgtggctt gaggttggca acaatttgga ctttcttgcc aaccaactct tgctcatttg
     1201 gataatactt ggcgatacca gacaggattt ggcggtcttg tccatcacca gcgtccaggc
     1261 ggaatttgag cagcttgtca gaaccctcca ccttggctac ttccttgact tcggccacgc
     1321 ggatttccat cttgtcgaag tcctcgaact tgatcgcagc tttttcgttt ttgagttcca
     1381 cgtcagctgg gttccactct ttttcttcct cttgggaaat agcagagctg ccacccattt
     1441 gggcttggat ataggcgatt tcctcttcca tatccagacg tgggaagata ggcgtgcctt
     1501 ttgcgactac ggtcaaacct gctggaagac ctgcaaaggc aagattttca aggtcaaatg
     1561 ctgttcccaa accaagttgt tccataatgg catttgaagt ggtcatcatg aatggctgaa
     1621 tgaggtgagc caccacacga agacctgctg ttaagtgagc catgactgct gccaacttgt
     1681 cgcggtccgc ttcttctttt gccaagaccc aaggtgcagt ttcatcgatg tacttgttgg
     1741 tacgggagat gatattccaa acagcttcca aagcgcgtgg gtagtcaaca gcttccatat
     1801 acttgtggta gcttgctaag ttttcagcca ctactgccgc caagtccgca tcaaaatctg
     1861 tcacattggc aacaaaggtt ggtacctgac cgccgaaata cttgttaatc atggcaacgg
     1921 tacggttgag caagtttcca aggtcgttgg ccagttcgta gttaatacga ccaacataat
     1981 cttctggtgt gaaggttccg tcagagccaa ctggcagact acgcatgagg tagtaacgaa
     2041 gtggatccaa gccgaaacgc tcgaccagca tttctggata gaccacattg cccttagact
     2101 tggacatctt accatctttc atgacaaacc aaccatgagc aaccaagcgg tctggcaact
     2161 tcatatccaa catcatgagc ataattggcc agtaaatgga gtggaaacga agaatgtcct
     2221 tgccaaccat gtggtaaact gttccattcc agaacttgtc gtagttggct gtttcttcct
     2281 gaccatagcc caaggcagtt gcgtagttga gtagggcatc gatccagaca tagacaacgt
     2341 gtttaggatt ggacggtaca ggtacacccc aggtaaatga agtacgcgat acggccaaat
     2401 cttccaagcc tggctcgatg aagtttttca tgatttcatt gagacgaccg tccggctgga
     2461 taaagtctgg gtgagcattg aagaactcga ccaacttatc ctgatacttg ctgaggcgga
     2521 ggaagtagga ttcttctgaa acccaggcaa cctcgtgacc gctcggagcg ataccgccta
     2581 ttaccttgcc attttcatct cggaagacct cttctaattg gctctcggtg aaaaattcct
     2641 cgtctgatac ggagtaccaa ccagaatact ctcccaaata aatgtcgtcc tgcgccagca
     2701 atttttcaaa aacagccgcc accacttcct cgtggtaatc atcagtcgtg cggataaatt
     2761 tgtcgtaaga gatgtccagc aagttccaga gctctttgac accaaccgcc atgccgtcaa
     2821 cgtaggcttg aggagtcaaa ccagcttctt tagccttctc ctcaatcttc tgcccatgct
     2881 catcaagccc tgtcagatag aagacctcgt ggcccatgag acgcttgtag cgagccaaga
     2941 catcgcaggc aatagttgtg taggccgatc cgatgtggag ttttccagac ggataataaa
     3001 tcggtgtggt aatgtaaaac ggtgtctttg tcatgttttt ttcctttcaa attcagagca
     3061 aatgaaaccc tgttattgac aatacttcat tatatcaaaa aaacacgctg agtgcatgtt
     3121 tttatggata cctaccaagg attgacctag tagcctatct ctaccaagtc aattcctgtt
     3181 atcctttcct tctcatagcg aacttggcaa ataagataaa attcagaaaa atcctgagcc
     3241 tctttatcct ctagaaataa agtagcttca aaacggtctt cactcacaca tgttatcgca
     3301 atttcactct cctcaaaagg ttccaagtga aaacctgtca agccttgctc tgttaaaaaa
     3361 ttctgtattt tctgattaaa ctcctctcgc gtcttttgag aatgatcaaa accattgtag
     3421 gcatcggtgt actgaccttt ttgaaaatct tgatacagta agcaaaaacg ttctttcaac
     3481 tgctgatgaa cttgggcagg aagttcaaac cgtggcttct ccactttctt ggtgttcact
     3541 ttggaaaata gctgatcaag gaagtggaaa aatagcagcg cgaagaaacc ttctaaccaa
     3601 gaaagaggga tgaggaaaag catgacaact aaggcagtca gtaccccaat ccaagaagat
     3661 gtcagaatcc caaccaccag tataacaatg acagttatgg gcaatgtcca actccaccta
     3721 gatttgaatg gtcttgattg tttcttggcc agtgctttat gataagcatt ctcaaaataa
     3781 agattgaccc agggattgag aaaccagttg tgagatatct gaccaaatat cggaagaatg
     3841 acaataacaa tcaccacttc agccagctca ggtaaccaga attcaccttg aaacacaaac
     3901 tgtacaatca aagccacaac aaatgaaatt acagcaactg tgaatagtaa gccaagagca
     3961 taattttgca acacctccac caacatccaa catcgatagg ttttggtata gttgctctga
     4021 aagtccttac caatgaacct tcccatagcc acataaaaat ccttaaaaca cggagaatat
     4081 ggcttctgtt gaatcgtttg agcctgacct gttcccttct tgaaaaatcg gagagagcca
     4141 ccctcgtttt caatatgctg gtctattttt tctgaaataa atggcatttt cccctctcat
     4201 attcctgccc aggatagcac aaccacggac cactttccta ctatttccct agggaagcaa
     4261 tcctcctctc catctcctcc atatcatagt caaaaagcag gtcatggcag tctgtaaaga
     4321 gctccaaacg tttgtcatca gctaaaacag caatatcaac tccccgatca tcgtagcaat
     4381 gatagatgat attgtcctga ctagatagga agagaactga acttgataga tagttaaaac
     4441 ctccatggtc ggctttgaca atctccctca acaaagcctt caggtcctgg tcggtaactg
     4501 gaaagagata gcgctcaaag actagcgcat ctcccgtcca atcctccact tctatcaact
     4561 caggctcagg gaccttgttg aagttaaatt tcgatgaaaa atgccagagg taggtgtcta
     4621 tatccctatc ttcctgtcga aggagcgaaa ggagcacata gtcgtattct gaactagcct
     4681 gctcaaaaag ttctactgca cgtgcatagg ctctttcaag atagattgct cttgataatt
     4741 cttctgcttc gtctgcagga ccgatttcaa atctaagagc aagaggtgtg ccataaaaga
     4801 atgggcccac tagtcgatta tctttcagtt gaaaggactt cagccattga ttcaattcca
     4861 tatactattc tccttatata gctttgtact attctaccat atactaggaa attaggtcta
     4921 gtcttctttg gaaaaatgtg atagaatagt gaactagtaa agtatctagt aaaaggaggt
     4981 cctatgaaaa ccgaatttat caatgagaag gctcaatcag ctttcaatct caacatcatc
     5041 acctctccta ttatagctat tattttgttg ctagtaggag attcactagg agcagttatt
     5101 ttcactccaa taagcttttt actcccattt agcgagaccc tttctgtaag ttttgaactg
     5161 ttcgctttcg cttttatcag cctgatggtc attttatggg cacggtatat tgaaaaaagc
     5221 ccgtgggtag gacttggttt tactaaaaaa ggtgcgggaa aagattttct actcgggtgg
     5281 ggaatcggag ctgcaatgct gaccacttgt acactcatca tgtggggatt aggcgcgatt
     5341 gaatttacaa gcatccagtt ctctacaaaa ttagtcggag aatttattat ccttatcctt
     5401 gcctggtcta tccaaggtac gacagaagaa attctaacaa gaggatggat gttctcatca
     5461 ctttcagcta aacacaatat tcctatcggt atcattgttt cttccctctt cttcacattt
     5521 ctccacctcg gaaacaatgc tatttcactc attccaattt tggatttaac cctatttgcc
     5581 gttctcgcct gcctcattat gctcaaaaca ggcaacattt gggtgattgg tggcttacac
     5641 gctgcgtgga attgcttcca agggaatgtt tttgctttcc cagtcagtgg caccgatgct
     5701 ggtcaggcct ttgttcaaat cggtatcact ggtcctgagt ggctatctgg gggaaggttt
     5761 ggcgtagagg gctccgtcat cagcttgctc gtccaaggaa taatgatttc ctggttggtt
     5821 tacgacctct atttcaagcc caaaacaagc tccctataat cataaaagac tgttagctac
     5881 tctacagctg acagtctttg ttttttcaat ttttcgtaga aaatggtcct ggataaatga
     5941 tagtaaggag tcacaaaaaa agataacaga tgaagggtca ataattcccc aataaaccaa
     6001 cctaaaaagg ataaatctaa ccagatacgt tgccaatagt ttcctttcat caagaaacga
     6061 ctttccctaa atacagccag aggaccagta taactagcat tatccaaatg gtcatacaag
     6121 acaaaaacaa cctgtgagta ggtatagtag acaaaaagat aaataatcat tcctagcagg
     6181 aaaatcggag cccctatctt catcaattga ctaggctgat gaactgccag ctctgccatt
     6241 gcccccggag ataagaccat caaactactc attgtgaagc ctttaataaa taaagcagct
     6301 cctagattag ctggaagacc agccataaaa agaagcaaat aataataaag aaaagtggtc
     6361 cagataggct tcttccattc tgtctttaga aatgaaaaac tatcttttaa agaaaactcc
     6421 tgtctatccc ctcttaacaa ttctaataaa tgaaaacagg acagaccgat gaacagctgt
     6481 aacagcagag cgaagctgaa cttacctaaa taagtcaacc tgattgaaga caccaatcgc
     6541 ccctccacaa aagcactgtt ttgacggagc tctagaaatg tcagtagacg aaaaattgtt
     6601 actggtatag cataaataat agatagcaaa atggagggca aaaatagtag tgttgtacct
     6661 cttgtccgct cgcgagtcat catcgctctt gatactatat cattcgtcct catcacaatt
     6721 cccctccaat tttctctcct tatttataaa gtcacgtcgc aaatattcta tctacatcgg
     6781 actactttac catcctacta ttagtataaa actttatcca ttaattttcc agaacatctc
     6841 ttaaaaacag gaaaatccct ccaaaatacg aagggattcc taataatttg ttatcaccat
     6901 actccctagg ctactgtgga agagatagct gatttataag ttgaaaacac caatggattc
     6961 ttggacttca aatcttcata aaatatagtc tgacaagtcc aatagtaggg atatacgtaa
     7021 agtcccaaaa aaccaaacgt caaaagaacc ccaataaacc agccaacaaa agataaatcc
     7081 aaaaggaaac ggcgccattt attccccttc atcaactgcc agctctgact gaagagttta
     7141 aatggtgaag aataggtatt gttttccaaa taatcataga gaagaaaaga gacctgactg
     7201 agcccatatc ctacgaataa actacaaata atccctaccc ataccagtat taatcctgtt
     7261 tgaaaataag acgaactgaa aaaagctgaa aaatcaggct gataatcaat aggagcacca
     7321 aagatgacaa tagtactata gaaagctaaa cctatcaata tcattccaag aacagcaggg
     7381 aaacttgcta aatacaagac cagcattttc aataatgtcg tactaaaaac tggtaaaaaa
     7441 ttcttcccat ctagtaaagt gaaacactcc gtaaagctaa ccttggttct ttgctttctt
     7501 accagtctta ttagttgaaa acaagctgtc acaattaaac attgtgcaat aaaatcaaat
     7561 atgattgacg ggccaacaga aataaaatta tgagtccaag taacaccatc tttcacaata
     7621 gttgtacccc aggagaaagt accagtttgc ccccagattt gtttcaagcc aaattctgcc
     7681 actcctgaca gaaaagaaat caaaacaggt gccaaaaaca aggttatcat cccatctgtt
     7741 tgttcacgaa taaccgttgc tttagctcga atatcgctat tagacatt
//
LOCUS       DBNFCX010000095         7745 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.095, whole genome shotgun sequence.
ACCESSION   DBNFCX010000095 DBNFCX010000000
VERSION     DBNFCX010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 7745)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7745)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7745
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.095"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..3346)
                     /locus_tag="AC1PJC_001874"
     CDS             complement(<1..3346)
                     /locus_tag="AC1PJC_001874"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620850.1"
                     /translation="MTYDANGNQISLTDAAGNTASTRYTGQNQVGQVTDALGHTTHFS
                     YNQMEQLREEIDALGGKTSYQYNELGYLTQVTNPNGHATQLSYTPTAQIKEVIQADGS
                     SIVNEYDALDRLIKQTQSSGLITEYSYDAANRLIAAKDNQSLNESYTYDAAGNRLTTT
                     NSLGQTTSMTYDSYNQLTKVTYADGSSESYTYDLSGNLATKTDVEGHETSYHYDENGN
                     LQKKVDHLGRETSYSYDQLNRVVTETDPEGHETNYEYDVLGNVASVTDANGHQSTYGY
                     DANERLVLYKDPKGQETVLKYDPLGRLLETVAPTGASQTYTYDAVGNRLSETTGEGNT
                     TSYTYDSLNRLLSLTKPTGGKTSYTYDQTGSLSTETDPSGDVTSYVNDLYGRATSRTL
                     PNQSTFSYSYDALGRLEKQTAPQGLSKTYTYDVAGNLIKEVDQSDRATSYTYDVAGRL
                     LVEKNALDLEKTYAYDEMGNLTSITSPSGAKTNLSYTKLDQLKTITSPTGRETELSYD
                     PVGQVTKRVINGKRETTYAYDPNGNLLEEVNPLGQVTKRTYDAGNRLTADTNTAGQTS
                     LYSYDKDNRLIKVSSPTGASSSLTYDGNGNLTSVLSGSKRLSSYTYDQEDQLLTATKG
                     SGDEASTSSYTYDSVGNLTSITNGNGQVTKYSYDQLGNVIEKMNALGDSETYTYDVNN
                     QLAKITKADGQTISYDYNKLDQLLTKKTSTESEGQVLYSYDADGRRVAMSDLTGQTRY
                     AYNEEGELTGVRQGDGSLITYTYDDYGNITKMVYPDGSEVAYSYDELDRLTKVTDRDG
                     KVTTYAYDKAGDMTKIERGDGTTSALTYDAAHRVTEIVHRDKKGKLISSYAYEYDDGN
                     YIAKETITQDGETLVQTYTYDSLGQIVKMTVSSKDGKELSQFSYTYDHAGNKLTSTET
                     VDGKESKTEFSYDVENRLLEMKSGDKTITYTYDKNGNRVSSGAGDAKLDYIYDTENRL
                     LAVKDKEGLLFAALYDGDDNRVFTASRTQATNTYQLFKRKPADKKRKSPYTAPDGEAN
                     SLFWYGFTQNVVQFFSGFTTSEGYDWIETFDTVSTAYHQKVAKDRATEEGLVVNPPSE
                     DNLPGEDEVLYRSQVQDVLIPYTTKED"
     gene            complement(3561..3947)
                     /locus_tag="AC1PJC_001875"
     CDS             complement(3561..3947)
                     /locus_tag="AC1PJC_001875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620851.1"
                     /translation="MNLQVQFFQNDVIKAIKGGVYQISLQKVDGERRVLYIGESFSML
                     IRCAQHLYQLRKYPEYLGMTTEILRDQNLILMFEILELEEAMGIRRKKEKEYIKKYSP
                     LLQSGLSDRMLPISRKKEAVANFIEI"
     gene            complement(3950..6229)
                     /gene="pcrA"
                     /locus_tag="AC1PJC_001876"
     CDS             complement(3950..6229)
                     /gene="pcrA"
                     /locus_tag="AC1PJC_001876"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase PcrA"
                     /protein_id="HIP6620852.1"
                     /translation="MNPLLNGMNDRQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYL
                     IDEKMVNPWNILAITFTNKAAREMKERAYALNPATQDCLIATFHSMCVRILRRDADHI
                     GYNRNFTIVDPGEQRSLMKRILKNLNLDPKKWSERSILGTISNAKNDLIDDKAFEAQA
                     GDLYTQIVAKCYTAYQKELRQSEAVDFDDLIMLTLRLFDQNPEVLTYYQQKFQYIHVD
                     EYQDTNHAQYQLVKLLASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPESKVVL
                     LEENYRSTKNVLQAANEVIENNRNRRPKKLWTQNAQGDLITYYRARDENDEAIFVAGQ
                     IDQLHREGKAYKDFAVLYRTNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDVISY
                     LNIIANPSDNISYERIVNEPKRGVGPGTVDKLRDFATSHSMSLLEASQDIMLSPIKGK
                     AAQAVFDLANLLYNLRNQLDNLTVTKVVEAVLNQTGYIDALAAQNTLEANARIENIQE
                     FLSVTKNFDEKDVEEEETGLDRLTRFLLDLALIADTDDGDTESSEVTLMTLHAAKGLE
                     FPVVFLIGMEENVFPLSRAAEEENELEEERRLAYVGITRAEQTLYLTNANSRLLFGRT
                     NYNQPSRFIREISSDLLDYQGLARPANTSFKASYVNGRATQFGQGMSLQQAMQSRKAS
                     VQPSAKLGGSMPFASSNKLSGSGTNWSVGDIAVHKKWGRGTVLEVSGSGSNQELKINF
                     PEMGLKKVLASLAPISKEE"
     gene            complement(6358..7725)
                     /gene="nox"
                     /locus_tag="AC1PJC_001877"
     CDS             complement(6358..7725)
                     /gene="nox"
                     /locus_tag="AC1PJC_001877"
                     /EC_number="1.6.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014612254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="H2O-forming NADH oxidase"
                     /protein_id="HIP6620853.1"
                     /translation="MAKIVVVGANHAGTAAIKTMLTNYGQENEIVVFDQNSNISFLGC
                     GMALWIGEQIGGPEGLFYSNKEELESLGATVYMESPVTNIDYDAKTVTALVNGQEHVE
                     SFEKLLFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIEKLKNKDI
                     NRVAVVGAGYIGVELAEAFQRKGKEVILIDVVDTCLAGYYDRDLSDLMAKNMEEHGIQ
                     LAFGETVKEVAGNGKVEKIITDKNEYDVDMVILAVGFRPNTAFAGEGIERFRNGAFLV
                     NKRQETSIPGVYAIGDCATIYDNATGDTSYIALASNAVRTGIVAAHNICGTDLEGIGV
                     QGSNGISIYGLNLVSTGLTLEKATRLGLNAAVTEVTDNQKPEFMEHGNFPVTIKIVYD
                     KDSRRILGAQMAAREDISLGIHLFSLAIQEGVTIEKLALTDLFFLPHFNKPYNYITVA
                     ALGAE"
BASE COUNT         1858 a         1832 c         1745 g         2310 t
ORIGIN      
        1 tgtcttcctt ggtcgtgtaa gggatgagga catcctgcac ttgactcctg tagagcacct
       61 cgtcttcacc cggtaggttg tcctcgcttg gtggattgac cacaagccct tcttccgtcg
      121 ctcggtcctt ggctaccttc tgatggtagg cagttgagac ggtatcgaag gtctcaatcc
      181 agtcatagcc ctcgctagtc gtgaatcccg agaagaactg aacgacattc tgcgtgaagc
      241 cataccagaa gagactgttg gcttcgccat ctggtgcagt atacggagat ttacgcttct
      301 tatccgctgg cttgcgtttg aagagctggt aggtgttggt cgcttgggtc ctgctggcag
      361 tgaagacacg gttatcatcc ccatcataga gagccgcgaa aagcagacct tccttatcct
      421 tgaccgccaa gagacgattt tccgtgtcat agatataatc cagcttggca tcaccagcac
      481 ccgatgacac acggttgccg ttcttatcat aggtgtaggt gatagtcttg tcgccagact
      541 tcatttcaag caggcgattc tcaacgtcat agctaaactc tgtcttgctt tccttaccat
      601 ccaccgtttc cgtgctggtc agcttgtttc ctgcatggtc ataggtgtag ctaaactgac
      661 ttagttcctt gccatcctta cttgaaacgg tcatcttgac gatttgacct agactatcgt
      721 aggtgtaagt ttggactaga gtttccccat cctgcgtgat ggtttccttg gcgatgtagt
      781 tgccatcgtc gtactcgtag gcatagctgg aaatcagctt gcctttcttg tcacgatgaa
      841 caatctcggt cacacgatgg gctgcgtcgt aggtcagagc acttgtcgtg ccgtctccac
      901 gctcaatctt ggtcatgtca ccagccttat cataggcgta ggtggtcacc tttccgtcac
      961 ggtcggtcac cttagtcagg cggtcgagct cgtcatagct ataggctacc tcgctaccat
     1021 ctggatagac catcttggtg atattgccat agtcgtcgta ggtgtaggta atcagactac
     1081 catcaccctg acgaacaccg gtcaattcac cctcttcatt ataagcgtag cgggtctggc
     1141 ccgtcaagtc actcatcgcc actctgcggc catccgcatc atagctgtag aggacctgac
     1201 cttctgactc ggtagaagtc ttcttggtca gcagttggtc cagcttgttg tagtcgtagc
     1261 taatggtctg accatcagcc ttagtaatct tggctagttg gttattgaca tcgtaggtgt
     1321 aggtctcgct gtctcccagc gcattcatct tttcgatgac atttcctagc tggtcatagc
     1381 tatacttcgt cacctgacca ttgccattgg tgatggaggt gagattgccc acactatcat
     1441 aggtgtagct gctggttgag gcttcatctc cacttccctt ggttgcggtc agcagttggt
     1501 cttcttggtc gtaggtgtag ctagaaaggc gcttgcttcc tgagagaaca ctggttagat
     1561 tgccattgcc atcataggtg aggctactac ttgcgcctgt cggactggac accttgatta
     1621 ggcggttatc cttgtcatag ctatagagac tggtctgacc tgcggtattg gtatcggctg
     1681 tcagacgatt gcctgcgtcg taggttcgct tggtcacctg accgagtgga ttgacttcct
     1741 ctaggagatt gccattcggg tcataggcat aagttgtctc ccgcttacca ttgataactc
     1801 gcttggtcac ttgccccaca ggatcatagc tcagctccgt ctcacggcct gtcggactgg
     1861 taatcgtttt aagctgatcc agcttcgtat aggacagatt ggtcttagca ccgctcggac
     1921 tggtgatgct ggtcagattg cccatctcat cgtaggcgta ggtcttttct agatccagag
     1981 cattcttctc caccaagaga cgaccggcaa catcgtaggt gtagctagtc gctcgatccg
     2041 actggtctac ttccttgata agattaccag ctacatcgta ggtataggtc ttggacaagc
     2101 cttgtggcgc tgtctgtttc tccagacgcc caagagcgtc ataactatag ctgaaagtcg
     2161 attgatttgg aagagttcga ctggtcgcac gcccgtagag gtcattgaca tagcttgtca
     2221 catccccact cgggtctgtc tctgtcgaga gactaccagt ttggtcatag gtatagcttg
     2281 tcttaccgcc agttggcttg gttaggctaa gcagacggtt gagactgtcg taggtatagc
     2341 tagtggtatt tccctcgcct gttgtttcag acagacgatt gcccactgcg tcgtaggtgt
     2401 aggtctggct ggcacctgta ggagccactg tctccagtaa gcgaccgagt gggtcgtatt
     2461 tcaagacggt ttcctgtccc tttggatctt tgtatagaac caggcgttca ttagcatcgt
     2521 atccgtaggt agattggtgt ccgttggcat ctgtgacact tgcgacattc cccagtacat
     2581 cgtactcgta gttggtctca tgcccctcag ggtccgtttc tgtcacgaca cggttgagtt
     2641 ggtcgtaact gtagctggtt tcgcgtccaa gatggtctac cttcttctgt aaatttccat
     2701 tttcatcata atggtagcta gtctcatgtc cttctacatc cgtcttagtc gctagattac
     2761 ctgataaatc ataggtgtag ctttcactac ttccatctgc ataagtgacc ttggtcaact
     2821 gattgtagct gtcataggtc atgcttgtgg tctgaccaag gctgttggtt gtcgtcaggc
     2881 gattgcctgc tgcgtcatag gtgtaacttt catttagaga ttgattatcc ttcgcagcta
     2941 tcagacgatt ggcagcatca tagctatact cagtaataag accgctagac tgcgtctgct
     3001 taatgaggcg atcaagagca tcatattcat tgacaatact actaccatct gcctggataa
     3061 cttctttaat ctgagccgtt ggtgtatagc tcagctgagt tgcatgacca tttggattgg
     3121 tcacttgggt caggtagcca agttcattat actggtagct tgtttttcca cctagagcat
     3181 caatttcctc acgaagttgc tccatttggt tgtagctaaa gtgagttgta tgaccaagtg
     3241 catcggtgac ttgaccaact tggttttgcc ctgtatagcg tgtgctggcg gtatttcctg
     3301 ccgcatcggt caagctgatt tgatttccgt tcgcatcata ggtcatcgtg gttatttgac
     3361 cgagagcatt tgtcgtactg ctcaaacgac cagcagcagt ataaaaagag ttcgtcttcc
     3421 cacccccgca tagttgatta ggtcagattt ggagtgtgaa acacgaacaa atctgccaat
     3481 caaccactgc gctgagatgt tgacacgaac tctggggagt ggagctgggc tttttgccca
     3541 gcctcatttt tatcactatc ttatatttct ataaaattag ccaccgcttc tttttttcta
     3601 gaaatgggta acatacgatc actaagtcca ctctgtaaca aggggctata cttcttaatg
     3661 tactcctttt ctttttttct tctgattccc atcgcttctt caagctctag aatttcaaac
     3721 attaagataa ggttttgatc acgaaggatt tcagtggtca tccctaaata ctctgggtat
     3781 tttctcaact gatataaatg ttgtgcacat cttatcagca tagaaaatga ttcaccgata
     3841 tacaagaccc gccgttcacc atcaactttt tgaagcgaaa tttgatatac tcctcccttg
     3901 atggctttta taacatcatt ttgaaaaaat tgtacctgaa gattcatccc tactcttcct
     3961 tactaatcgg tgctaagctt gccaagactt ttttgagtcc catttctggg aaattgattt
     4021 tgagttcttg attgctgcct gagcctgata cttcaaggac tgtcccgcgt ccccatttct
     4081 tgtggactgc gatgtcacca actgaccagt tggtgcctga gccagacaat ttgttacttg
     4141 atgcgaaagg catactgcct ccgagcttgg ccgatggttg tacggatgct tttcgacttt
     4201 gcatggcttg ttgcaaactc ataccttgtc caaactgtgt cgctctgcca ttgacataag
     4261 aagccttaaa gctagtattg gctggacgag cgaggccttg ataatcaagc aagtcactgg
     4321 aaatttctcg gataaagcgg cttggttggt tgtaattggt gcgaccgaaa aggagtcgag
     4381 aattggcatt ggtcaggtag agagtctgct cagcacgggt gatgccaacg taagccaaac
     4441 gacgttcttc ctccaattcg ttctcttctt ctgctgcacg actaagtggg aagacatttt
     4501 cctccatacc aatcaagaag acaactggaa attccagacc tttggctgcg tggagggtca
     4561 taagagtcac ttctgaagat tctgtatcgc catcatctgt gtcagcaatc agggccaaat
     4621 caagcaggaa gcgtgtcaac cgatccagac ctgtctcttc ttcctcaaca tccttttcat
     4681 caaagttttt ggtaacagaa aggaattcct ggatgttttc aatgcgggca tttgcttcca
     4741 gggtattttg tgctgcaagg gcatcgatgt agcctgtttg gttcaatact gcctcgacta
     4801 ctttggtaac cgtcaagttg tctaattgat tacgaagatt atagaggaga ttggctaggt
     4861 caaagactgc ctgcgctgcc ttccctttaa tcggcgacaa cataatatcc tgagaagctt
     4921 ctagcaagga catgctgtgg ctggtcgcaa aatcacggag tttgtcaacc gtaccaggtc
     4981 caacgccacg tttgggctca ttgacaatgc gttcatagga aatattatcc gatggatttg
     5041 cgatgatatt caaataagaa atcacatctc gaatttcctt acggctgtag aacttggtgc
     5101 ctccaaccat ggtataaggg atattagatt tgagcaaggc ttcttcaatg gtacgggatt
     5161 gggcattagt ccgatagagt acagcaaagt ccttataagc cttaccttct cggtgcaact
     5221 ggtcaatctg ccccgcgaca aaaatcgcct cgtcattttc atcccgagca cgataatagg
     5281 taatcaaatc cccttgggca ttctgtgtcc agagtttttt tggacggcga ttacggttgt
     5341 tttcgatgac ctcattggca gcctgcaaga cgttcttggt cgaacgatag ttttcctcca
     5401 aaagcacaac cttactctct ggatagtcct tttcaaagtc caggatattt tgcatatccg
     5461 caccacgcca accatagata gactggtccg catcaccgac cacgcagata ttcttgaaac
     5521 gtgatgccag gagcttgacc aattggtact gggcatggtt ggtatcctga tactcatcga
     5581 catggatata ctggaatttc tgctggtaat aggtcaggac ctctggattt tggtcaaaaa
     5641 ggcggagcgt caacatgatc aaatcatcaa agtcaacggc ctctgactgt cttagttcct
     5701 tttgataagc cgtgtagcat ttagcaacaa tctgcgtgta taggtcgcct gcctgcgctt
     5761 caaacgcctt gtcatcaatc aagtcgtttt tggcattaga aatagttccc aggatagaac
     5821 gttcactcca ctttttcgga tctagattga gattttttaa aatccgtttc atgagactgc
     5881 gttgctcacc tggatcgaca atggtaaaat tgcgattata accaatatgg tcagcatccc
     5941 gacgcaaaat ccgcacacac atggagtgga aggtagcaat caaacagtct tgcgtagcag
     6001 gattgagggc gtaggcccgc tccttcatct cacgcgccgc tttattggta aaggtaatgg
     6061 ccaagatatt ccaaggattg accatttttt catcaatcaa ataagcgata cggtgagtca
     6121 ggactcgcgt cttacccgaa ccagcccctg ccataatcaa tagcggacct tccgtcgtct
     6181 gtaccgcttc tgcctgtctg tcattcattc cgtttaataa agggttcatg ttctcatact
     6241 ctctctaaaa aatcattctc tccattatac caaaaaaact ctcgataggc agttgccatg
     6301 tgatagatga caagcaaaaa agcccagagt catctctgag cctttgtatt caattaatta
     6361 ttcagcaccc aaggcagcta ctgtgatgta gttgtaaggt ttgttgaagt gtggcaagaa
     6421 gaacaagtct gtcaaggcca atttttcgat tgttacacct tcttggattg ccaatgagaa
     6481 gaggtggata cccaatgaga tatcttcacg agcagccatt tgcgcaccaa ggatacgacg
     6541 tgaatcttta tcgtaaacaa tcttgatagt aacagggaag ttgccatgct ccatgaattc
     6601 tggtttttgg ttgtctgtta cttcagtaac cgcagcattc aaaccaagac gagtagcttt
     6661 ttcaagtgtc aaacctgttg atacaaggtt aagaccgtag atagagatac cgttagaccc
     6721 ttgtacaccg ataccttcaa ggtcagtacc acagatgttg tgagctgcta cgataccagt
     6781 acgtactgcg tttgaagcca aagcgatgta gcttgtgtcg ccagtagcgt tgtcgtagat
     6841 agttgcacag tcaccgatag cgtaaacgcc tgggattgaa gtttcttggc gtttgtttac
     6901 aaggaaggca ccgttacgga agcgctcgat tccttcacct gcaaatgcag tgtttggacg
     6961 gaaaccaaca gccaagataa ccatgtcaac atcgtattcg ttcttgtcag tgatgatttt
     7021 ctcaacttta ccattaccag caacttcttt aacagtttcg ccaaaggcaa gttgaatacc
     7081 atgctcttcc atgtttttag ccataaggtc tgacaagtcg cggtcatagt aaccagccaa
     7141 acatgtatct acaacgtcaa taaggataac ttctttacct ttacgttgga atgcttctgc
     7201 aagctcaaca ccgatgtaac cagcaccaac aactgctacg cggttgatgt ctttgttttt
     7261 caatttttca ataacatctg ctgagttttg gtacaattta acaaattgca agttttcaag
     7321 agttgcttca aattcaagag aaccttcttt gatttcagct cctttgattg gtggcaagat
     7381 aggttgtgaa ccagttgcga aaagaagttt ttcaaatgat tcaacatgtt cttgaccatt
     7441 tacaagcgct gtaactgttt tggcatcata gtcaatgttt gtaacaggtg actccatgta
     7501 tactgtcgcg cccaagctct ccaactcttc tttgtttgag tagaaaagtc cttcaggacc
     7561 gccaatttgc tcaccgatcc acaaagccat accacaaccc aagaatgaaa tatttgagtt
     7621 ttggtcaaat acaacgattt cattttcttg accataattt gtcaacatag ttttgattgc
     7681 ggcagtacca gcatggttag caccgacaac aacgatttta gccataatgt aaaatctcac
     7741 tttcg
//
LOCUS       DBNFCX010000096         7731 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.096, whole genome shotgun sequence.
ACCESSION   DBNFCX010000096 DBNFCX010000000
VERSION     DBNFCX010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 7731)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7731)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7731
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.096"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..734
                     /locus_tag="AC1PJC_001878"
     CDS             <1..734
                     /locus_tag="AC1PJC_001878"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620854.1"
                     /translation="FFILTAGLLVFLSACNCEKTNITSNNGSSTSSTIRKIEQSQTNS
                     EESDITYSKSESYYRSILIQSRDEQRHYIESLPQEQQQSVQTTFSAMVMKAEELKQEF
                     SSDKELIEMVLHDLLEEEEQVRDFSTSETSDLIETYAKKKNMRYLQGTPATQQKYYGY
                     SVPDELLKFVFLNGNPISFQFYGYVIGEGELYILNDCYVNEAGTELVLFVERNGQKYV
                     LESNKSPDNQKIDVFFSQDEVLTSY"
     gene            997..1158
                     /locus_tag="AC1PJC_001879"
     CDS             997..1158
                     /locus_tag="AC1PJC_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SHOCT domain-containing protein"
                     /protein_id="HIP6620855.1"
                     /translation="MDVQKINNEMTYQLTMIQAQVLLKNGSITIEEFELFRQLMLEKY
                     QPFISQLST"
     gene            1216..2451
                     /locus_tag="AC1PJC_001880"
     CDS             1216..2451
                     /locus_tag="AC1PJC_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015057811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HIP6620856.1"
                     /translation="MRTVRRIQPIKSPCKPRFKVAAYARVSDSRLHHSLSTQISYYNR
                     LIQAHPDWELVGIYYDEGISGKEQSNRQGFQNLMKDCDDGKIDRIIIKSIARFGRNTL
                     ELLTTVRQLRLKNIGVTFEKENIDSLSSEGELMLTLLASVAQEESQNLSENIRWRIQK
                     KFEKGIPHTPQDMYGYRWDGEQFQIEPNEAKVIRKVFKWYLDGDSVQQIVDKLNQEQV
                     LTRLGNPFTVASIREFFKQEAYFGRLVLQKTYRESFSRNPKRNKGQRNKYIIENAHEP
                     IVTKEYFDLVLHEKERRYQLMSQESHLNKGIFRDKISCSECGCLMIVKVDSKQVNKTV
                     RYYCRTRNRFGASSCSCRTLGEKRLLASFKSKLGIVPDKEWVENNIKHIEYDFGHRII
                     RVTPVKGRKYPIEIREGRY"
     gene            2451..4034
                     /locus_tag="AC1PJC_001881"
     CDS             2451..4034
                     /locus_tag="AC1PJC_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017771979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HIP6620857.1"
                     /translation="MKKVITIEAIPSIIRSSSDDFSLKKRRVAGYARVSTDHEDQATS
                     YESQMRYYSEYINGRDDWEFVKMYSDEGISGTNTKLRTGFKAMVEDALNGKIDLIITK
                     SVSRFARNTVDSLTTVRQLKEVGVEIYFEKENIWTLDSKGELLITIMSSLAQEESRSI
                     SENVTWGLRKQFAEGKVHFPYTNVLGFRAGEDGAIVVDQDEAKTVRYIFQQALIGKSP
                     YHIAKDLTEQGVPSPSGKSHWNATTIKRMLRNEKYKGDALLQKTYTIDFLTKKKNINR
                     GELPQYYVENNHEAIVDRETFDAVQQVLDNKGRKSSTTIFGSKLVCGDCGHFFGSKVW
                     HSTSKYRRVIYQCNDKYKGEKKCETPHVTEEELKQGFVLAINQVLDNKAEVIDNIKAL
                     FSIDSLVSIDDEIRELENEADILSQMISTLVVENARVLQDQDEYQSKYQKLSSKYETT
                     VKNIELLEVKKLAISKRNKDLQDFISVLEKQDGLVKYFDEFLWDTFVENVTITNDKQF
                     RYFFKNGAVATLKVTIVNV"
     gene            4136..4309
                     /locus_tag="AC1PJC_001882"
     CDS             4136..4309
                     /locus_tag="AC1PJC_001882"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620858.1"
                     /translation="MALIRKRKSQNRQRLGKFFEFISEDTTQQIITKNTDAVSNTKDL
                     VDHLKSKDRGRVA"
     gene            4449..5528
                     /locus_tag="AC1PJC_001883"
     CDS             4449..5528
                     /locus_tag="AC1PJC_001883"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620859.1"
                     /translation="MQEKLQKLLIFNNQSAHLFSSIEPLIDAVQQGLKQVKNSWNSST
                     RSFVIPEKEKLSWAEGVNKKWEQRIDLVEAGIDYLIKPDFISKGAGAIHPYAKTAYLM
                     GKSYMSAVSKDYKKSGFMKYGKLGKKANENLQTAWRSVKKLANEKNWKWYAKLGSKWK
                     KGSFNKFLSTFHHSITSKAANFKVFGKYPVKNINSVLGKMTDPIKTYGKKLIETVSKS
                     KIGSKLKFVGKAAKVLGWVAVGVDVTVTSVREFNNKDSRAYGSVGKSLIHAGVAQLKS
                     AGPIEGALIGAKAGPWGALAGFAAGTINTVWGIVSPDTKNAFYSGVQNVLDDGYDFIA
                     DGVGKAVKGTWNSVTSWFGGGAKYA"
     gene            5521..6399
                     /locus_tag="AC1PJC_001884"
     CDS             5521..6399
                     /locus_tag="AC1PJC_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620860.1"
                     /translation="MRKERLLSATFEQSKKVVSKKILTEEGAQVGVLSSMKLSQRFSG
                     LVILLLFIMSYGVGVYLPESLLTSTEKIRYISTSTAQSIVTIGTIFRIPLLALMYCSI
                     VMVIINVFPKKNYAHQLLYGTITLLVFLITVFLMLFPFTIGLTVGAFGWIGFLLQLLV
                     CVYLWKTLVISNVEQLKKQLYKGEPANKDWGESLMAFIKKYGGVLLLLAIVNRWTFNF
                     GEAIKTQPDIFSFLYGWAFLLVAALMIFTTGMTLKNFVAAFYFFKYQKEYRQFFKVSN
                     EQWYGKWRAKKMNKNK"
     gene            complement(6515..6661)
                     /locus_tag="AC1PJC_001885"
     CDS             complement(6515..6661)
                     /locus_tag="AC1PJC_001885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620861.1"
                     /translation="MTEFERFMLSTCFGATLGWILGIYLVHLTDLISFIRRKLKERKE
                     RTNK"
     gene            complement(6899..7462)
                     /locus_tag="AC1PJC_001886"
     CDS             complement(6899..7462)
                     /locus_tag="AC1PJC_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003672028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2815 family protein"
                     /protein_id="HIP6620862.1"
                     /translation="MLPYTKLIIPITGPNTRFSYLNANEPKSINGGTPKYSVSLIIPK
                     DDTATIDKIHEAIELAYKDGESKLKGNGKTVPALSVIKTPLRDGDLERPDDAAYQNAY
                     FVNANSPHKPGVVDANRQEIIDTSELYSGIYGRASISFYAFNSNGNKGIACGLNNLQK
                     LRDGEPLGGRTRAQDDFATEDDDDFLN"
     gene            7549..>7731
                     /locus_tag="AC1PJC_001887"
     CDS             7549..>7731
                     /locus_tag="AC1PJC_001887"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620863.1"
                     /translation="MDFTVYHATGTLFLSSIINEGLKPMDLDIKYKVKEALRLLLQIV
                     PSEYVTDYEKSKFFLDN"
BASE COUNT         2598 a         1231 c         1617 g         2285 t
ORIGIN      
        1 gatttttcat tttaacagca ggtttactgg tattcttgtc tgcatgtaat tgtgaaaaaa
       61 caaatattac atcaaataat ggtagttcta cctcatcaac tattaggaaa attgagcaat
      121 ctcaaacaaa ttcggaggaa tctgatataa cttattcgaa atcggaaagt tattatcgta
      181 gtattcttat tcaatctcga gatgaacaac gtcattatat tgaatcttta cctcaagaac
      241 agcaacaaag cgttcaaaca acattttctg caatggtaat gaaagcagag gaactcaaac
      301 aagaattttc ctcggacaaa gagttaattg aaatggtgtt gcatgacttg ttggaggaag
      361 aagaacaagt aagggatttt tctacttcgg aaacttctga tttaatagaa acttatgcca
      421 agaaaaaaaa tatgcgttat cttcaaggga ctccagctac acagcaaaaa tattacggtt
      481 actcagtacc cgatgaatta cttaagttcg tatttttgaa cggtaatcca atatcattcc
      541 agttttatgg ttatgtgatt ggagaaggcg aattgtatat cctcaatgac tgctatgtga
      601 atgaagcagg aacagaactt gttttatttg ttgaaagaaa tggccagaag tatgttttag
      661 aaagtaacaa gtcaccagat aatcaaaaaa ttgatgtttt ctttagtcaa gatgaagttt
      721 tgacttctta ttgacggtaa aatattagat aaaattaata ttgattattt ttctccttcc
      781 cacatatcaa atttcttttg gatttattag ttggtaatag ggaaaactac cttgaaatgg
      841 agtgggaaat taacctgcat agggcagggc ggtttctatt taagtttttt attaaattta
      901 gcctggtgga aacatcaggc tttatttttt ttgccttttt ttcaataagt gcggaaaaat
      961 tactcccaaa cctacctagt aaggtaggag gataatatgg acgtacaaaa aataaataat
     1021 gagatgacct atcaactaac aatgatacaa gcacaggtac ttctaaaaaa tggatcaatc
     1081 actattgagg aatttgaact ttttaggcaa ttgatgcttg aaaaatatca accgtttata
     1141 agtcaattat cgacctaata actggataat tttttctttt agagtgatat atagtagcga
     1201 aaggagtgta ttaatttgag aacagttaga agaatacaac ccataaaatc gccctgcaag
     1261 ccaagattta aggttgcagc ctatgcaagg gtttccgata gtcgtcttca tcattctctg
     1321 tcaacacaga ttagctacta taaccgtttg atacaagcgc atcctgattg ggaattggta
     1381 gggatttatt atgatgaggg tataagtggc aaagaacaaa gtaatcgaca aggctttcaa
     1441 aatcttatga aggattgtga tgatggtaag attgatagga ttatcattaa gtcaatcgct
     1501 cgatttggtc gaaatacact tgaattacta actactgttc gacaattacg tctgaaaaat
     1561 attggtgtta cttttgagaa agaaaatata gatagtctta gctcagaagg tgaattgatg
     1621 ttaaccctcc ttgcctcagt agctcaagag gagtctcaaa acctgagtga aaatataaga
     1681 tggcgaatcc aaaagaagtt tgaaaaaggg attccgcaca ctccacagga tatgtatgga
     1741 taccgttggg atggagaaca atttcagatt gaacctaatg aggcaaaggt tattcgaaaa
     1801 gtctttaaat ggtatctgga tggagattcg gtacagcaga tagttgataa actcaatcag
     1861 gaacaagtct taacaaggct tggcaatcca tttaccgtag caagcatcag agaattcttc
     1921 aagcaagaag catactttgg tcgccttgtc ttacagaaga cctatcgtga atcattctct
     1981 agaaatccga aaaggaataa agggcaacgt aataagtaca tcattgaaaa tgcacacgag
     2041 ccaattgtta caaaagaata ttttgattta gtacttcatg agaaggagcg aagatatcag
     2101 ttaatgagtc aagaaagcca cttaaataaa ggtatctttc gtgacaagat ttcatgttca
     2161 gaatgcggat gtttgatgat tgttaaagtg gattcaaaac aagttaataa aaccgtacga
     2221 tattattgta gaacacgtaa tcgatttgga gcatcatcat gttcatgtag gacgttagga
     2281 gaaaagcgac ttttggcatc gtttaaaagc aagttaggca ttgtcccaga taaagagtgg
     2341 gttgaaaata atattaaaca catcgagtat gactttggtc accgtatcat cagggtaaca
     2401 ccagtaaaag gaaggaaata tcctatagaa attagagagg gacgatatta gtgaagaaag
     2461 taattactat tgaggctata ccaagtatta ttaggtcaag ttcagatgat ttctctttga
     2521 aaaagcgtag agttgcaggc tatgccaggg tatcaactga ccatgaagac caagcaacaa
     2581 gctatgagtc acagatgcgg tactactctg aatacattaa tgggagggat gattgggaat
     2641 ttgttaaaat gtactctgat gaaggtatca gtgggacaaa cacaaaatta agaactggtt
     2701 tcaaagctat ggtggaagat gcacttaatg gcaaaatcga tttgattatt acaaaatctg
     2761 ttagtcgatt tgcgagaaat accgtagact cactgactac agttaggcag ttgaaagagg
     2821 taggtgtaga aatctacttt gagaaagaaa acatttggac attagattca aaaggtgagc
     2881 tactcataac catcatgtct agtttggcac aagaagaaag taggagcata tccgaaaacg
     2941 taacttgggg cttaaggaaa caattcgcag aagggaaggt tcatttccct tacaccaatg
     3001 ttttaggctt tagggcaggt gaagatgggg caattgtagt tgatcaggat gaagccaaaa
     3061 ctgttaggta catctttcag caagctctta ttggaaaatc accttatcat atcgcaaagg
     3121 atttgactga acaaggtgta ccttcgccta gcggtaaatc tcattggaac gcaaccacaa
     3181 tcaagcgaat gcttagaaat gagaagtata aaggggatgc tttactacaa aaaacttata
     3241 caattgattt tctaaccaaa aagaagaaca tcaacagagg tgaattgcct caatattatg
     3301 tggagaataa ccatgaagca atagtagata gagagacctt tgatgcagtt caacaagtgc
     3361 tcgacaataa aggcagaaag tcgagtacaa caatcttcgg ctcaaaacta gtatgtggag
     3421 attgtggtca cttctttggt agcaaggtat ggcattcaac ctccaaatac agaagggtaa
     3481 tctaccaatg caatgataaa tacaagggag aaaagaagtg tgaaaccccg catgtaaccg
     3541 aggaagaact gaaacaagga tttgttttag caatcaatca ggtacttgat aataaagctg
     3601 aagtaataga taacatcaaa gccctgtttt caatagatag tctggtttcc attgatgatg
     3661 agataaggga acttgaaaat gaagctgata ttctaagtca aatgatttca accttggttg
     3721 tggaaaatgc tagggttctc caagaccagg atgaatatca atctaagtat cagaaactca
     3781 gttcgaaata tgaaaccaca gtaaaaaata ttgagttact ggaggtgaag aaactagcaa
     3841 tatcaaagag gaacaaagat ctgcaggatt tcatcagtgt cttggaaaaa caagatggtc
     3901 tagttaaata ttttgatgaa ttcttgtggg atacctttgt tgagaatgtc accatcacca
     3961 atgataaaca atttcgatac ttcttcaaaa atggagcggt tgcaacatta aaagtgacga
     4021 ttgtaaatgt ttaaaaatat tccgcttaaa tgatgtcacg attctttcat gtatgaaaga
     4081 aaaatataaa cgaatgtatg gtataataaa acgataaact cgcaaggaga attgcatggc
     4141 tttaattaga aagcgtaaat cccaaaatag acagagatta ggaaaatttt ttgaattcat
     4201 ctctgaagat acaactcagc aaataattac taaaaatact gacgcagtaa gtaatacaaa
     4261 agatttggtt gatcatttaa aaagtaaaga cagaggacga gttgcgtgat aagattcaga
     4321 gggcaggcct catggctagt cggtacgact acctagcgtc tttagagcga aacaagaaag
     4381 ttcccaatct atcgcatgct tacaacctat ctcttacagc tagtcgctat atggaggttg
     4441 agcgaaggtt gcaggaaaag ttgcaaaaac ttttgatatt taataatcag tctgcacatc
     4501 tcttctcttc aattgaacct ttgatagatg ctgttcaaca aggcttgaag caagtaaaaa
     4561 attcttggaa ttcgagcact cgaagtttcg tgatacctga aaaggaaaag ctatcttggg
     4621 ctgaaggtgt gaacaagaag tgggagcagc gtatagacct tgtcgaagct ggtattgatt
     4681 acctcataaa accagatttt atttctaaag gggcaggtgc aattcatcct tatgcaaaaa
     4741 cagcatattt aatggggaag agttatatgt cagctgtctc aaaagattac aaaaaatctg
     4801 gctttatgaa atacggtaag ttggggaaaa aagccaacga gaatttacag actgcatggc
     4861 gtagtgtgaa aaagcttgca aacgagaaaa attggaagtg gtatgctaaa ctaggttcga
     4921 agtggaaaaa gggaagcttc aataagtttt tgagtacatt ccatcattcc atcacttcaa
     4981 aggctgcaaa ctttaaagta tttggtaaat atcctgtaaa aaatattaat tccgtgcttg
     5041 gaaaaatgac agatccaata aaaacctatg gaaaaaaatt aatcgagaca gtaagtaagt
     5101 ctaaaatagg aagtaaactt aaattcgtag gtaaggctgc aaaagtactg ggttgggttg
     5161 ctgttggggt tgatgtcact gtcactagtg tcagagaatt taataataag gacagtcgag
     5221 cctacggtag cgtaggaaag tctttaattc atgcaggtgt tgcacaactg aagagcgcag
     5281 gaccgattga aggggctctg ataggtgcta aagctggacc ctggggcgct cttgccggtt
     5341 ttgcggcagg cactataaat actgtttggg gtattgtgtc accagataca aaaaatgcgt
     5401 tttactctgg agtacagaat gtactagacg atggatacga tttcattgcg gatggtgtcg
     5461 ggaaagcggt taaaggtaca tggaattctg tgactagttg gtttggtgga ggagctaaat
     5521 atgcgtaaag agaggttact atcggcaacc tttgagcaat caaaaaaggt tgttagtaag
     5581 aagatactaa cagaagaagg tgcacaggtt ggcgtattat cttctatgaa gctatctcaa
     5641 aggttttctg ggctagtcat tttattactt tttattatgt catatggagt aggagtatat
     5701 ctaccagaaa gtctcttaac ctcaacagag aaaattagat acatatcaac ctctactgcc
     5761 caatcaattg tcactattgg aacaatcttt agaatcccgc tattggcact gatgtattgc
     5821 tcaatagtaa tggttatcat aaatgttttt ccaaaaaaaa attatgcaca tcaattgctt
     5881 tatggaacca ttactcttct tgttttttta atcacagtat ttttgatgct gtttcccttt
     5941 acaatcggtc tcacagtagg tgcctttgga tggattggtt ttttacttca actgttagta
     6001 tgtgtatatc tgtggaagac tctagtaatc tcaaatgtag aacagcttaa aaaacaactt
     6061 tataaggggg aaccagctaa taaagactgg ggagagagcc taatggcatt tatcaagaag
     6121 tatggaggtg ttctattact tctagctatt gtcaatcgtt ggaccttcaa ttttggggaa
     6181 gcgatcaaaa cgcaaccaga cattttcagt ttcttgtatg gttgggcttt cttattagtt
     6241 gcggctctca tgatttttac tacgggcatg accctgaaaa attttgtagc tgcattttac
     6301 tttttcaagt accaaaaaga atatcgccag ttctttaaag tctcaaacga gcaatggtat
     6361 ggtaaatggc gtgcaaaaaa gatgaataaa aataaataat aggagtaaaa taatgactaa
     6421 ggtctacttc ggaatagctc tcaatatcga ttgatagttc tttcatcttg tcctccaaaa
     6481 caagggtagt gtttttgctt cactacccta ttatttactt atttgtccgt tctttccgct
     6541 ctttcagctt tcgtctgata aaagagatga ggtcggttag gtgaactaga tagattccca
     6601 aaatccatcc aagtgttgcc ccaaaacatg tcgaaagcat aaatcgttca aattcagtca
     6661 tcatattctc cttatttatc ttgaaaccat ttcgctgatg gaaatagtag gtgtagtgcc
     6721 atttttgctt ttattaagaa ccactttatc attgctaccc aagcgtatgc ctagactaga
     6781 aatagaatgg tgtaaagtgt agcttgcgtt atatagttca tcaaatcagt cagtattgtc
     6841 atttgttctc cttttacatg aaacagtagg gtggggattg cccacccact ggtttagctt
     6901 agttcaaaaa gtcatcatca tcttcagtcg caaagtcgtc ctgtgcacga gtacgtccac
     6961 caagaggttc accgtcacgg agtttctgaa ggttgttcag cccacaggca attcccttat
     7021 taccatttga gttgaaggca tagaaggaga tggacgcacg accatagata ccagaataga
     7081 gttctgatgt gtcaatgatt tcttgacggt tggcatctac cacacccggt ttatgtggcg
     7141 agttagcgtt gacgaagtag gcgttttggt atgctgcatc atcaggacgt tccaagtcac
     7201 cgtcacggag tggggtctta atcacagata gtgctggaac ggtcttcccg ttgcctttga
     7261 gtttagactc accatctttg taggcaagct caatggcttc gtgaatttta tcaatggttg
     7321 ctgtatcatc tttaggaatg ataagcgaca cactgtattt gggtgttcca ccattgatgg
     7381 atttaggctc gttggcattc aagtagctga aacgagtgtt tggaccagtg attggtataa
     7441 ttaacttagt gtacggaaga atattttcat ttcggtaaat tattgtattt aaactttaat
     7501 atttgattaa attaatagac agtataatat caatttatgg ggggatttat ggatttcaca
     7561 gtttaccacg caacaggtac gttgtttcta tcttctatta ttaatgaagg gctaaaacca
     7621 atggacttgg atattaaata caaagttaaa gaagccttaa gattattact gcaaattgtt
     7681 cctagtgagt atgtcacaga ttacgaaaaa tctaaatttt ttcttgataa t
//
LOCUS       DBNFCX010000097         7347 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.097, whole genome shotgun sequence.
ACCESSION   DBNFCX010000097 DBNFCX010000000
VERSION     DBNFCX010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 7347)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7347)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7347
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.097"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(55..1332)
                     /locus_tag="AC1PJC_001888"
     CDS             complement(55..1332)
                     /locus_tag="AC1PJC_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HIP6620864.1"
                     /translation="MNKQTYKEILTIAFPAMGENLLQMLMGVVDSYLVASIGIVALSG
                     VSLANNILAVYQAVFIALAAAVSSRLAQALGEGGSEGIGGTASESVKFTVFIGLLLGI
                     FSVLAGPIVLTSLGAESEVVQAGGLYLILVGGGASFLGLMTSLSAILRTLGEPRFPMY
                     ISLLSNVLNALFSAFSVFVLHAGVAGVAIGTVLSRLIGCSLLWSRLPISLKPWTWSFD
                     KELLRLALPATGERLMMRVGDVVVVALIASLGTATVAGNAIGETLTQFNYMPALGIAT
                     ATIILTAKHRQDKAMVRHIFRTSFGRSLLFMFLVAGMTYFAGPLLIDLYTKDIQAAQA
                     SQTVLFYAMLGVPFTAGTLILTALWQGLGNARLPFYATTIGMWLVRIGIAYLLVTFFK
                     IGLSAIWIATILDNAFRAGVLFFQYRYSKQESI"
     gene            complement(1338..2765)
                     /locus_tag="AC1PJC_001889"
     CDS             complement(1338..2765)
                     /locus_tag="AC1PJC_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6620865.1"
                     /translation="MLSRFSDSRPAVTVKNVALTYSGADKPALQIEDLTIPEGQCVVL
                     CGQSGSGKSSFLKVLNGLTPEYYPAQLSGQIFLGDLDLQKSSLEEISRHIASVFQHPS
                     TQFFHSQVLQELVFPCENQGLSREEIENRLAWVMELFGLASLSQRTISSLSGGQQQRL
                     ALAVAAMQGTDVLVLDEPTANLDQEGIAIVEDILKTLKSQGKTIIIAEHRLSYLSQLA
                     DRYLYFQDGQVVTDYPASDFLHRTEECRQDMGLRCYDSEPYGRAIAELADQFVNDKEG
                     LLVENLSVSQKENTLYEIEKLCLASGQVVGLVGANGSGKTSLARYLVGLAEDKKSRIS
                     WQGQTLSSRQRLEKTAFVMQDVRLQLFAESVERELTLGRKNRDVDEHLVARFGLSDLL
                     ERHPVSLSGGEQQRVMIVASLLADKEIFIFDEPTSGLDLRRMQQVASALVDLKMKNKL
                     VLLISHDEELLNLVCDKIVDIKQLK"
     gene            complement(2729..3388)
                     /locus_tag="AC1PJC_001890"
     CDS             complement(2729..3388)
                     /locus_tag="AC1PJC_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     component T"
                     /protein_id="HIP6620866.1"
                     /translation="MKLDARTKIILVIFTSFSYGMRLTILENAVLVLGLSLLFWFSGK
                     RKMAIMSPIAYSIFCLLSYITFLPAWLTHLLLVLTYTWPPLLAGHLLLMTTSGYELIH
                     GLRKWYLPEVFLLTLGVMFRFLPAIKQDARTICASLKVRGIFLRKRDVVCKPLQYMEF
                     FLVPLMMSLLRTAQELTVASLTKGLAVSTKSPAYIRSSWTVLDWSLCLCCLGFLILVR
                     L"
     gene            complement(3385..3978)
                     /locus_tag="AC1PJC_001891"
     CDS             complement(3385..3978)
                     /locus_tag="AC1PJC_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MptD family putative ECF transporter S
                     component"
                     /protein_id="HIP6620867.1"
                     /translation="MKKLQVKDLMVTGAFAALYFVCVGLGTLLSLVFDRSGNMMYAPA
                     GAALLAGPVYMLLIAKVGKPGSISLVGAVMACFFFLSGYMTAAFLPSLTFGFLAEMVA
                     KSGHYKQKWTNLFSYIIFSFGNLGPIILMWFMRDAYEANLLARGKSAEYVARVMLDFT
                     PENVLWLSTTIILTALISGLFGQYMLQRYFKQSGYLS"
     gene            complement(3979..5640)
                     /locus_tag="AC1PJC_001892"
     CDS             complement(3979..5640)
                     /locus_tag="AC1PJC_001892"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6620868.1"
                     /translation="MDKEEMPTWVLIPRLLQSMKHLLPRIAVAVCFAVLGQVVTIAIP
                     VMLVYLAFNALTGNPAPLWTLGILILLALLRGAFRYGEHYFGHYVAFHTLAAYRRLIF
                     AKLRALAPGKLDRQDSGSLLKMIGEDIEALEVFFAHTIAPICTGILVAFGLTVYFGLS
                     SWGLGLLALVTYALLAIAIPNRFAKQLQPLLKEQNASRKGYVSYFIESLKSMKDLMQF
                     QQTDARFAKLTQKSQEVNGQERKVAQTNFMQYAVSFLVVGLSIMGFAWLTFDLVGSQS
                     LKLATGVALLVSFTSSFAPFLELSRLPLGFKRAMNAGRNIYALLDEKEAERTGELVEV
                     RVTDIAIEQLDFDYDDRETGLYRNLSVQFEQGGIIGLVGESGAGKSTLMKLIMRWYDW
                     KQGQIRLSGLDSRQVDKAHLQGSFAYVPQVPQIFRQTIRENLVLGRTDVSDETIMDLA
                     EKCHMKERILAALQGLDTIVEASDFSAGEGQRLELMRALLKNADCYIFDEPTSNLDSL
                     NEARFIQLVKEHCQGMVFLISHRSSTMACADTIFCLEDGQLVKEK"
     gene            complement(5633..7345)
                     /locus_tag="AC1PJC_001893"
     CDS             complement(5633..7345)
                     /locus_tag="AC1PJC_001893"
                     /EC_number="7.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003039008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0042883 - cysteine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HIP6620869.1"
                     /translation="MQRLKERIKPKMKLVYLAAFLSWVQFLMRIISFYLIAKGFVSYY
                     EGGQVDLVRFVLILLGLNAFGYGVALIAKRLQGLGSQFARDSLKQSFFEALLAKDGQF
                     ESKATAADVFNIASQGIDSLDTYYSYYMASSLRTQFNCATVLLLVFLIFPLGAVIFIL
                     ALPLIPISIIAMQKRSKRIMNRYWGSYMDVGNLFLDDLKGLNTLYSYQADATYEKTFN
                     EQAEDFCDATMELLSFQLQAVGYMDTVMYLGIGLSGFVAVNSLAAGNLSLFSMLFFVL
                     IATEFFAPIREQGYGMHLVMMNTKMADRIFGFLDSMTAEQEIDAAHVPAFDSLKLEDL
                     AFAYGEKLVLKDISMAMTAGKVYALAGESGQGKTTLAQLLLGRLRAAKGAIYLGEQEI
                     SGISQLSLNEQVLYVSGQSTLLNQSIYENLRMAGDWSKEDILAWADQHGVLQFVKHLP
                     DGLDTIVGDDGAFLSPGQRQQVICARAVLAKRSLYIFDEVTSSVDQDNEGLIYELINL
                     VAKDAIVIIITHKMKQVEQADDILFLSAEGAVTGSHTTLYQTSLAYGQLVDQQRELEE
                     AVYG"
BASE COUNT         2262 a         1882 c         1472 g         1731 t
ORIGIN      
        1 atatagtata tagctacaaa cttaaaagaa actgaaaatt ttcttagcat tatcttaaat
       61 tgattcttgt tttgaatacc tatactgaaa aaatagcacc cctgctcgga aggcattatc
      121 taaaatcgtt gcaatccaaa tggctgacaa accgatttta aaaaatgtta caagtaaata
      181 agctatgcca atccgcacta gccacatacc gatagttgtg gcataaaaag gtaatctagc
      241 atttcccaaa ccttgccaaa gagctgtcaa aataagagtg ccagctgtaa agggaactcc
      301 caacatggca taaaataata ctgtttgact agcttgtgct gcttgaatat ccttagtata
      361 aaggtcgatt aggagaggcc ccgcaaaata agtcatacca gccaccaaaa acataaacag
      421 caaagaacgg ccaaagcttg ttcgaaaaat atgtcgaacc atagccttat cctgtctgtg
      481 ttttgctgta aggatgattg tagcggtagc aatccctaaa gccggcatat agttaaactg
      541 cgtcagggtt tctccaatcg catttccagc taccgtcgct gttcctaagc tggcaatcaa
      601 agccacgact accacatctc ccacccgcat catcaaccgt tcaccggttg ctggcagagc
      661 aagtctaagc agttctttat caaaggacca ggtccatggt tttaaagaaa ttggtaagcg
      721 agaccaaagc aggctacaac caatcaaccg cgataagacc gtgccaatcg caactccagc
      781 tacacctgca tgaagcacaa agactgaaaa tgccgaaaat agtgcattta gaacatttga
      841 gagcaggctg atatacatag gaaaacgtgg ttcccccaag gttcgtaaga ttgcactcaa
      901 acttgtcatg agtcccaaaa aagatgctcc cccaccaacc aatatcaaat aaagacctcc
      961 agcctgtacc acttctgatt ctgcccccaa gctagtaagt actattggac ctgccagaac
     1021 tgaaaaaatt cctaaaagga gaccgataaa aactgtaaac ttgacacttt cactagcagt
     1081 tcctccaatg ccttctgaac ccccttcacc caaagcctga gccaaacgag aagacaccgc
     1141 tgctgctaga gcaataaaaa ccgcctgata gacggctaaa atattattag caagggaaac
     1201 tccagacaaa gctacaatgc caatactggc tactagataa gagtctacta cccccattaa
     1261 catctggaga aggttttccc ccatggctgg aaaggcaatg gttaaaattt ctttataggt
     1321 ttgtttgttc ataatctcta tttcaactgt ttaatatcta ctattttatc acaaaccaga
     1381 ttcaatagct cttcatcgtg agaaattaac aaaaccaact tattcttcat ttttaagtct
     1441 actaaagcgg aagcaacttg ctgcattcgt ctcaaatcca agccgctcgt cggttcatca
     1501 aaaatgaaaa tttccttatc tgccagtaag ctagctacta tcatcacgcg ctgttgttca
     1561 ccgcccgata aactgaccgg atgtctctcc aacaaatccg atagaccaaa acgagccacc
     1621 aaatgttcat cgacatctct atttttcctt ccaagagtaa gttctcgctc aacactttcc
     1681 gcaaatagtt ggagtcgaac atcctgcata acaaaggctg ttttttccaa tctctggcga
     1741 ctagataagg tttgaccttg ccaagaaatc ctactcttct tatcttccgc taaaccgacc
     1801 agataacgag caaggcttgt ttttccagaa ccattcgctc caaccaaacc caccacctgt
     1861 cctgatgcca agcagagttt ttcaatctcg tagagggtat tctctttctg acttaccgat
     1921 aaattttcaa caagtaaacc ctctttatca ttaacaaact ggtctgccag ctctgctatt
     1981 gcccgcccat aaggctccga gtcataacaa cgcagtccca tatcctgacg gcattcttct
     2041 gtccgatgga ggaagtcgct ggctggataa tccgtcacca cttgcccatc ttgaaaatat
     2101 aaatagcgat ctgccaactg actgagataa gacagtctat gctcggcaat aataatggtc
     2161 tttccttggc tttttaaagt tttcaagatg tcctctacaa tcgcaatccc ttcctgatct
     2221 aggttggcag tcggctcatc taaaaccaag acatctgtcc cttgcatggc tgcaacggcc
     2281 aaggctagac gttgttgctg accacctgat agactggaaa tcgttcgctg gctaagagaa
     2341 gccaaaccaa ataattccat aacccaagcc aggcgattct cgatttcttc tcttgacaaa
     2401 ccctgatttt cacaagggaa aaccaattcc tgcaagacct gactatgaaa aaattgagta
     2461 gacggatgct gaaagactga agcaatgtgc cgagatattt cctccagact agatttttgt
     2521 aaatccaagt cccctaagaa aatttgtccc gaaagctgag caggataata ttctggcgtc
     2581 aaaccattta acaccttgag aaaactagac ttcccagagc cactctgccc acataaaaca
     2641 acacactggc cttctggaat ggtcagatcc tctatctgca aggctggttt atctgctcct
     2701 gaataagtta atgctacatt ttttaccgtc acagccggac gagaatcaga aaaccgagac
     2761 aacataaaca aagactccaa tctagcacgg tccaagacga ccgaatatat gcaggtgatt
     2821 ttgtagatac agccaaacct tttgtcagac tggctactgt caattcctga gctgttcgca
     2881 agagagacat catcaaggga accaagaaaa actccatgta ctggagtggc ttacaaacca
     2941 catctctctt ccgtaaaaaa attcctctaa ccttcaaaga ggcacaaatc gtacgagcat
     3001 cctgtttaat ggcaggtagg aaacgaaaca ttactcccaa cgtcaaaaga aatacctctg
     3061 gcaggtacca tttccgcaag ccatgaatga gttcgtaacc acttgtcgtc atcagtaata
     3121 gatgtcctgc taaaagcgga ggccatgtat aggtcaatac aagcaacaaa tgcgtcagcc
     3181 atgctggtaa aaatgtaata taggacaaca gacaaaaaat agaataggct atcggactca
     3241 ttatagccat tttccgcttt ccagaaaacc agaaaagcag gctaaggcct aagaccagca
     3301 ctgcattttc taatattgtg agacgcatcc cataggaaaa actagtgaag atgacgagaa
     3361 taatttttgt acgagcatct aatttcatga aagataacct gattgtttaa aatagcgctg
     3421 aagcatatat tgaccaaaca gaccactgat aagagctgtt aagataatgg tcgttgacaa
     3481 ccatagcaca ttctctggag tgaaatcaag catgacacga gcgacgtatt ctgctgattt
     3541 tccacgtgcc aaaagattgg cctcataggc atctcgcatg aaccacataa gaataatagg
     3601 tcccaagttt ccaaaagaga aaatgatata gctaaaaaga ttggtccatt tttgtttata
     3661 gtgacctgac ttcgctacca tttctgccaa aaaaccaaag gtcaaacttg ggagaaaggc
     3721 cgctgtcata tagcctgata ggaaaaagaa acaggccatg actgcaccga ctagactaat
     3781 agaacccggt ttcccaacct tggcaatcaa gagcatatag actggaccag ctaagagagc
     3841 tgctccagct ggtgcataca tcatattacc cgaacgatca aaaaccaagc tcaacaaggt
     3901 tcctagacca acacaaacaa agtagagggc agcaaaagcc cctgttacca tcagatcttt
     3961 tacttgtaat ttcttcattt atttttcctt tactaattgt ccatcttcca agcagaaaat
     4021 ggtatccgca caagccatgg tcgagcttct atgggaaatc aagaagacca tgccctgaca
     4081 atgttcctta accagctgga taaagcgggc ttcattgagc gaatctaggt tactagttgg
     4141 ctcatcaaag atatagcagt ccgcattttt gagcagggct cgcatgagtt ccaggcgttg
     4201 tccttctcct gctgaaaagt cactggcttc cacaatcgta tccaagccct gcagtgctgc
     4261 caaaatccgt tctttcatgt ggcatttttc tgccaagtcc atgatggttt catccgacac
     4321 atctgtccgt cccaaaacaa gattttctct aatggtctgg cggaagattt gcggcacctg
     4381 aggtacatag gcaaaggagc cctgcaaatg tgccttatct acctgccgac tatccaagcc
     4441 agacaggcgg atttgaccct gcttccaatc ataccaccgc atgattagtt tcatcaaggt
     4501 ggattttcct gcaccggact caccgactaa gccaataatc ccaccctgtt caaactggac
     4561 agacaggttt cgatagagcc ctgtttctcg gtcatcatag tcgaagtcca gttgttcgat
     4621 agcaatgtcc gtcactctga cctcaacaag ctcacctgtt cgctctgctt ctttttcatc
     4681 caaaagagca tagatattgc gaccagcatt catagcccgc ttgaaaccaa gaggcagacg
     4741 gctgagctcc aagaagggag caaaggagct agtgaaagaa accagcagag ctacccccgt
     4801 tgccaatttc aagctctgac tgcccaccaa gtcgaaggtc agccaggcaa accccatgat
     4861 agacaggcct accaccaaga aggaaacggc atactgcatg aagttagttt gagcgacctt
     4921 tcgctcctga ccattgacct cttggctttt ctgcgtcagc ttggcaaaac gagcatctgt
     4981 ctgctggaac tgcatcaggt ccttcatgct cttaagactt tcaataaagt aggaaacata
     5041 gcccttacgg ctagcatttt gctctttgag caagggctgc agctgcttgg caaaccgatt
     5101 tggaatagca attgccaaaa gggcataggt caccagagcc aagaggccca aaccccagct
     5161 agataaacca aaatagaccg tcaaaccaaa agccaccaaa atccctgtac aaatcggggc
     5221 aatagtatgg gcaaagaaaa cttccaaggc ctcaatgtcc tcaccaatca tcttaagcag
     5281 gctaccgctg tcctgccgat ccaatttacc aggagccaag gccctcagtt ttgcgaaaat
     5341 caaacgacgg taagccgcca gggtatgaaa ggccacatag tgaccaaagt aatgctcacc
     5401 atagcggaag gcgccacgta aaagagctag gagaatgagg attcccaagg tccatagcgg
     5461 agcaggattg ccagtaaggg cattgaaagc cagatagacc agcataactg gaatagcaat
     5521 ggtcactacc tgtcccaaga ccgcaaagca aaccgccacc gcaatccgtg gcaagaggtg
     5581 cttcatggac tgcaagagtc tcggaatcag cacccatgtc ggcatttctt ccttatccat
     5641 aaacggcttc ctccaattct ctttgttgat cgaccagctg accataggcc aagctagtct
     5701 gataaagtgt cgtatgactg cctgtcacag ctccctccgc agacaagaag agaatgtcat
     5761 ctgcctgctc cacctgtttc atcttatgtg taataataat aacaatcgca tccttggcca
     5821 ccaagttaat gagttcgtaa atcaaacctt cattgtcctg atcgacgctg gacgtcacct
     5881 cgtcaaagat ataaagggag cgtttagcca agaccgcacg ggcacagata acctgctggc
     5941 gttgaccagg cgacaagaaa gcaccgtcat cgcccacaat cgtgtctaac ccgtctggca
     6001 aatgcttaac aaactgcaag accccatgct gatctgccca agccaagatg tcctccttgg
     6061 accaatcacc agccatgcgt aaattctcat agattgactg gttgagcaag gttgactggc
     6121 ccgagacata gaggacctgc tcattcagag aaagctgact gatacctgaa atctcctgct
     6181 cacccaagta aatagctccc ttagccgccc gcaagcgtcc caagagcaac tgggccaagg
     6241 tcgttttccc ctgaccagac tcgccggcca aagcatagac cttaccagcc gtcatggcca
     6301 tagaaatatc tttcaagact agcttttctc cgtaggcaaa ggccagatct tctagtttta
     6361 gactgtcaaa agcaggcaca tgggcagcat cgatttcctg ctccgctgtc atactgtcca
     6421 aaaaaccaaa gatgcgatcc gccatcttgg tattcatcat caccaagtgc ataccgtagc
     6481 cctgctcccg aataggtgca aaaaactccg tcgcaatgag gacaaagaag agcatactaa
     6541 agagggagag attccctgcc gctaggctat tgaccgccac aaaaccagaa agaccaatcc
     6601 ccagatacat gaccgtatcc atgtagccca ccgcttgcag ctgaaagctt agtagctcca
     6661 tggtcgcatc gcagaagtcc tcggcctgct cattgaaggt tttctcataa gtcgcgtccg
     6721 cctgatagga atagagggtg ttgagccctt tgaggtcgtc caggaaaaga ttgcccacat
     6781 ccatgtagga tccccagtag cgattcatga tccgcttgga ccgcttctgc atagcgataa
     6841 tggaaatcgg gatcagaggc agagccagga taaaaatgac cgcacccagc gggaaaatca
     6901 gaaagaccag caagagaacg gtcgcacagt tgaactgggt ccgcaaggaa gaagccatgt
     6961 agtaggaata ataggtatcc aggctgtcaa tcccctgtga ggcgatgtta aagacatccg
     7021 ccgccgttgc tttggattca aactgaccat ccttagccaa gagggcctcg aagaaggatt
     7081 gcttgagcga atctcttgca aactgggaac ccaagccctg caaacgcttg gcaatcagag
     7141 ccacaccata gccaaaagca ttgagcccca gcaagatgag gacaaagcgt accagatcaa
     7201 cctgaccacc ctcatagtag ctcacaaagc ccttagcaat cagatagaag gaaataatcc
     7261 gcatcaaaaa ctgcacccag gatagaaagg ctgccaaata aaccagcttc atcttgggtt
     7321 tgatgcgttc tttgagccgc tgcaaga
//
LOCUS       DBNFCX010000098         7281 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.098, whole genome shotgun sequence.
ACCESSION   DBNFCX010000098 DBNFCX010000000
VERSION     DBNFCX010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 7281)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7281)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7281
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.098"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(103..1173)
                     /locus_tag="AC1PJC_001894"
     CDS             complement(103..1173)
                     /locus_tag="AC1PJC_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIP6620870.1"
                     /translation="MKRLYSFFVGIIAIVLVLWGISYKLEADSTQGTTDKLVIYNWGD
                     YIDPELLEEFTAETGIQVDYQTFDSNESMYTKIKQGGTTYDLTIPSEYMISKMTEENM
                     LIKLDKSKIEGIENIDPRFMGLSFDKNNDYSIPYFWGTLGIVYNETMVENPPQEWEDL
                     WSEEYRDNIMLIDGVREVMGFGLQSLGYSLNSNNPTEIEKAAEHLYNLTPNVKAIVAD
                     EIKGYMIQDAAAIAVSFSGEASEMLDGNENLRYVVPSKGSNLWFDNMVIPKTAKNIDG
                     AYAFMSFMLRPENALRNAEYVGYSTPIPAAKAMLGEETQNDESFYPSEETMKKMEVYD
                     NLGPEMLGMYNDLYLQFKMYRK"
     gene            complement(1173..1943)
                     /locus_tag="AC1PJC_001895"
     CDS             complement(1173..1943)
                     /locus_tag="AC1PJC_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIP6620871.1"
                     /translation="MKKFANIYLTVAFLLLYLPIFYLIFYAFNEGGDMNGFTGFTLEH
                     FSSMLSDSRLMLILAQTFLLAFLSSLIATLIGTFGAIYIYQAKPRFQNALLSVNNILM
                     VAPDVMIGASFLILFTMIGFQLGFVSVLLSHIAFSIPIVVLMVLPRLKEMNADMISAA
                     YDLGATQPQMLKEIMLPYLTPAIIAGYFMAFTYSLDDFAVTFFVTGNGYSNLSVEIYS
                     RARQGISLEINALSTLVFLFSILLVVGYYFISREKEAN"
     gene            complement(1943..2743)
                     /locus_tag="AC1PJC_001896"
     CDS             complement(1943..2743)
                     /locus_tag="AC1PJC_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIP6620872.1"
                     /translation="MKKTSRLFAIPYALWVFLFVLAPVALIIFKSFFDIHGNFTLANY
                     QTYFNSPNMTYLRMSFNSIFYAGIITLVTLLVSYPTAYFLTKLKHRQLWLMLIILPTW
                     VNLLLKAYAFIGIFGQHGSINQFLEFIGLGAQQILFTDFSFIAVAAYIEIPFMILPIF
                     NALDDLDKNLINASRDLGATPWQTFTKVIFPLSMNGVRSGVQAVFIPSLSLFMLTRLI
                     GGNRVITLGTAIEQHFLTTQNWGMGSTIGVVLILAMLLIMWMTKERKK"
     gene            complement(2727..3881)
                     /locus_tag="AC1PJC_001897"
     CDS             complement(2727..3881)
                     /locus_tag="AC1PJC_001897"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000184097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6620873.1"
                     /translation="MKKPIIEFKNVSKVFEDNGTTVLKDISFELEEGKFYTLLGASGS
                     GKSTILNIIAGLLDASSGDIYLDGQRINDVPTNKRDVHTVFQSYALFPHMTVFENVAF
                     PLKLRKVDKAEIERRVTEALQMVRLSGYENRSIQKLSGGQRQRVAIARAIINQPRVVL
                     LDEPLSALDLKLRTEMQYELRELQQRLGITFVFVTHDQEEALAMSDWIFVMNEGEIVQ
                     SGTPVDIYDEPINHFVATFIGESNILPGRMIEDYLVEFNGKRFEAVDGGMRPNEEVEV
                     VIRPEDLQITLPEEGKLQVKVDTQLFRGVHYEIIAYDDLGNEWMIHSTRKAIVGEVIG
                     LSFEPEDIHIMRLNETEEEFDARIEEYVEVEEVEDGLINAIEEERNEENL"
     gene            complement(3920..4828)
                     /gene="murB"
                     /locus_tag="AC1PJC_001898"
     CDS             complement(3920..4828)
                     /gene="murB"
                     /locus_tag="AC1PJC_001898"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HIP6620874.1"
                     /translation="MKDKIRLELEGIDIRFDEPLKEYTYTKVGGAVDYLAFPRNRYEI
                     VRIVEFAKREGIPWQVLGNSSNIIVRDGGIRGFVIRMDKLNSVTVSGYTIEAEAGANL
                     IETTKVALFHSLSGFEFACGIPGSIGGAVYMNAGAYGGEVAHILVSAQILTPAGYVET
                     LDNRELRFGYRSSILQENGAIVLSAKFALKPGNHTVIQQEMARLTHLRELKQPLEYPS
                     CGSVFKRPLGHFAGQLIMDAGLKGYRIGGVEVSEKHAGFMVNIENGTASDYENLIAHV
                     IQVVEKSSGITLEREVRIIGDPADTL"
     gene            complement(5064..5924)
                     /gene="thrB"
                     /locus_tag="AC1PJC_001899"
     CDS             complement(5064..5924)
                     /gene="thrB"
                     /locus_tag="AC1PJC_001899"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HIP6620875.1"
                     /translation="MKIIIPATSANIGPGFDSVGVALSKYLTIEVFEETDEWVIEHNL
                     EHVPSDKNNLLIKTALKIEKGLQPHRIRMISDIPLARGLGSSSSVIVAGIELANQLAG
                     LNMTADEKLLKATEIEGHPDNVAPAIFGNLVISSYVNKRVQAVVTEFPEASFVAFIPN
                     YPLRTVESRGVLPSQMGYKKAVAASAIANVAVASLMAGDLEKAGKAIQSDMFHEPFRQ
                     LLVKEFCPIKQTAQELGAYATYLSGAGPTVMVLAPKDKEDAIVLALEELNLDGTVHRL
                     QVDTKGIAIV"
     gene            complement(5928..7214)
                     /locus_tag="AC1PJC_001900"
     CDS             complement(5928..7214)
                     /locus_tag="AC1PJC_001900"
                     /EC_number="1.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019782768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004412 - homoserine dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HIP6620876.1"
                     /translation="MVVKIGLLGFGTVASGVPFLLEENQEKIEKAAHDSIEVAKVLVK
                     DEAEKDRLLAAGHNYNFVTNIDEILADEDIAIVVELMGRIEPAKTFITRALEAGKHIV
                     TANKDLLAVHGSELRALAEEKGLALYYEAAVAGGIPILRTLVNSLAADKVTRILGVLN
                     GTSNFMLTKMVDEGWTYEKALQTAQELGYAESDPTNDVEGIDAAYKAVILSQFAFGMT
                     VDFEHVAHKGISNITPEDVAVAQELGYVIKLVGDIQETTSGIAAEVSPTFLPKNHPLA
                     SVNGVMNAVFVESIGIGQSMYYGPGAGQKPTATSVMADIIRIVRRLKDNTIGKAFNEY
                     SRPLQLAAPSDVKSEYYFSIDAPDKNGKMLRLAEIFNSEEISFKQILQQAADGETARL
                     VIVTHEMSKTQLENVTDKLSKETDFTVLNTFKVLGE"
BASE COUNT         2230 a         1586 c         1362 g         2103 t
ORIGIN      
        1 ggaatatgtg atactgaatg tattaaatga acagtaaaaa gcaaccacta tttgcggttg
       61 ctcatactat tctgatttga aaactagata tggatattca gactatttcc gatacatctt
      121 gaattggaga tagaggtcat tatacattcc aagcatctct ggtccaagat tatcataaac
      181 ttccatcttc ttcatcgttt cttctgaagg atagaaggat tcgtcgttct gagtctcctc
      241 acccagcata gccttggctg caggaattgg tgttgaatag ccaacatatt ctgcattgcg
      301 aagcgcattt tcaggacgaa gcataaaact cataaaggcg taagctccat caatattttt
      361 tgctgttttt ggaatgacca tattatcgaa ccaaagatta gaaccttttg atggtacaac
      421 atagcgcaga ttttcatttc catctaacat ttcactcgcc tcacctgaga atgaaacagc
      481 aattgctgcc gcatcttgta tcatataacc ttttatctca tcagcaacaa ttgctttgac
      541 atttggagtt aaattataaa gatgttcggc tgccttttca atctcggtag gattgttgga
      601 attgagacta tagcccagtg attgtagacc aaagcccatg acttcacgca caccatcaat
      661 taacatgata ttgtcacggt actcctctga ccacaagtct tcccattcct gaggaggatt
      721 ttctaccatg gtttcattgt aaacaatgcc caaagttccc cagaaatatg gaatagaata
      781 atcattattc ttgtcaaagc taagtcccat aaatcgtgga tcgatatttt ctatcccttc
      841 gatcttagat ttatccagct tgattaacat attttcttct gtcatcttag aaatcatgta
      901 ctcagatggg attgtcaaat cgtatgttgt tccaccctgc ttaatctttg tgtacatgga
      961 ttcgttggag tcaaaggtct gataatctac ctgaatacca gtttcagccg taaattcttc
     1021 cagcaattct gggtcaatat aatcgcccca gttatagatg acaagtttat cagttgtccc
     1081 ctgggttgaa tcagcttcta acttataact aattccccat aaaactagga caatagctat
     1141 aattcctaca aaaaatgaat acaatcgttt cattagttgg cctccttttc acgtgagatg
     1201 aaataataac ccactaccaa taagatagag aaaaggaaaa ctagggttga caaggcattg
     1261 atttctagag aaatcccttg acgagcccgc gagtagattt caactgaaag gtttgagtag
     1321 ccattccctg ttacaaagaa ggtcacggca aagtcatcta aggaataggt aaaggccatg
     1381 aagtagcctg caatgatggc tggtgttagg tatggcaaca tgatttcttt cagcatttgt
     1441 ggctgagttg cccccaaatc ataagctgca gaaatcatat ccgcattcat ttccttcaga
     1501 cgaggtaaga ccattaagac tacgattgga atagaaaagg caatatgact gagcaatact
     1561 gagacaaagc cgagctgaaa accaatcata gtaaagagaa tcaggaaact tgccccaatc
     1621 ataacgtctg gtgctaccat caagatatta ttgacagaca agagtgcatt ttgaaaacga
     1681 ggttttgcct gatagatata gatggcgccg aaagttccta taagggttgc aatcaaagaa
     1741 ctcaaaaaag ctaataggaa ggtttgagct aagatgagca tgagacggct atcactgagc
     1801 atggaagaaa aatgctccaa ggtaaagcct gtaaagccat tcatatcccc gccttcatta
     1861 aaggcataaa aaatgagata gaaaatcggt aagtagagaa ggagaaaggc aactgttaag
     1921 tagatatttg caaatttctt cattatttct tcctctcttt cgtcatccac ataatcaaga
     1981 gcatggccaa aatcaagacc acaccaatgg ttgaacccat tccccagttt tgtgttgtga
     2041 ggaaatgttg ttcaatggct gttcccagtg taatgactcg attaccgcca atcaaacggg
     2101 tcaacatgaa gaggctcaaa cttggaatga aaactgcctg aacacctgag cgaacgccgt
     2161 tcatggaaag aggaaaaata acttttgtga aggtctgcca aggagttgct cccaaatcac
     2221 gactggcatt gattaggttt ttatccaaat catctaatgc gttaaagatc ggcaaaatca
     2281 taaacggaat ctcgatatag gctgcaacag caataaagga gaaatctgtg aaaagaattt
     2341 gctgagctcc tagaccaata aattctagga actggttgat agagccgtgt tgcccaaaaa
     2401 taccgataaa ggcataggct ttcagcaaaa gattgaccca ggtcggcaag ataatcaaca
     2461 tgagccagag ttgtctatgc ttgagcttgg tcaagaaata ggctgttggg taggaaacca
     2521 aaagtgtgac cagagtaata atacctgcgt aaaaaataga gttaaaactc attcgcagat
     2581 aggtcatatt tggcgagtta aaataggtct ggtagttggc caaagtgaaa ttgccatgaa
     2641 tatcaaagaa agatttgaag ataatcaagg caactggagc gagtacaaag agaaagaccc
     2701 atagggcata gggaattgca aaaagcctag aggttttctt cattgcgttc ctcctcaatg
     2761 gcgttaatca agccatcttc tacttcttcc acttcaacat attcttcgat acgagcatcg
     2821 aattcttcct ctgtttcatt gagacgcatg atatgaatat cttctggctc aaagcttagt
     2881 ccaatcactt ctccgacaat ggccttacga gttgagtgaa tcatccactc attaccaagg
     2941 tcgtcatagg cgatgatttc gtagtgaaca ccacggaaga gctgtgtatc cacttttacc
     3001 tgcaatttcc cttcttcagg taaggtaatc tgcaaatctt ctggacggat aacaacttca
     3061 acttcttcgt ttggtcgcat accgccatcg acagcttcaa agcgtttgcc gttaaactca
     3121 accaagtagt cttctatcat gcggcctgga aggatattgg attcaccgat gaaggtagca
     3181 acaaaatggt tgattggctc gtcgtaaatg tccactggcg tcccagactg gacaatctca
     3241 ccttcattca tgacaaaaat ccagtcactc atggccagag cttcttcttg gtcatgggta
     3301 acgaagacga aggtaattcc tagacgttgt tgcaattcac gcagttcgta ctgcatttcc
     3361 gttcttagtt tcaagtccag agcagaaagt ggttcatcta gcaagacaac acgaggctga
     3421 ttgataatcg cacgtgcaat agcaacccgc tggcgttgac caccagacaa tttctgaatg
     3481 gaacgatttt cataaccaga aagtcggacc atttgtaagg cttctgtcac acggcgttcg
     3541 atttcagcct tgtcaacctt tcgtaattta agaggaaaag ccacattttc aaagacagtc
     3601 atatgtggga aaagggcata ggactggaaa acagtatgga catcccgttt attggtcgga
     3661 acatcattaa tccgttgacc gtccagataa atatcacctg aactcgcatc caatagacca
     3721 gcaataatgt tcaaaatcgt tgatttacct gaaccagaag ctcctaaaag ggtataaaat
     3781 ttcccctctt ccaattcaaa actaatatcc tttaatacag ttgttccatt gtcttcaaat
     3841 acttttgaaa cgttcttaaa ttcaataatt ggctttttca attctcataa attccttctt
     3901 ttttgtaaga gcctgatggc tagagtgtat cagcaggatc gccgataata cgaacctctc
     3961 tctccagagt aattcctgaa gatttttcaa caacttgaat cacatgggca atcaaatttt
     4021 cgtaatcaga tgctgtacca ttttctatat tgaccataaa gccagcgtgt ttttcagaaa
     4081 cttcgactcc accaattcga taacctttta aacccgcatc cataatcaac tgtcctgcga
     4141 agtgaccaag tggacgcttg aagactgaac cacaagatgg atattccaaa ggttgcttga
     4201 gctcgcgcaa atgtgtcaaa cgagccattt cttgttgaat aaccgtatga tttcctggct
     4261 tgagggcaaa ttttgcagac aaaacaatcg caccgttttc ctgcaaaata gaagaacggt
     4321 agccaaatcg taactcacga ttgtccaatg tttcgacata acctgctgga gtcaaaatct
     4381 gtgctgaaac tagaatgtgg gccacttcac ctccgtaagc acctgcattc atatagacag
     4441 caccaccaat gcttcccgga ataccacaag caaattcaaa tcctgataaa gaatggaaaa
     4501 gtgcaacttt tgttgtttca atcagattgg cacctgcttc tgcttcaatg gtgtatcctg
     4561 atacagtaac ggagttaagt ttatccatac ggataacaaa accacgaata ccgccatcgc
     4621 ggacaatgat attacttgaa tttcctaata cttgccacgg aataccttcg cgtttagcaa
     4681 attctactat acgaacaatc tcgtaacgat tccgcggaaa agctagataa tcaacagctc
     4741 ctcctacttt tgtataggta tattctttta aaggttcatc gaatcgaata tcgatgcctt
     4801 ctaattcaag cctaatttta tctttcataa ccttctcatt tcaatttaag atatacagga
     4861 tttattatac caaaaattac aggagaaaac gaataaaatt caacaaaaat acttttacaa
     4921 gccaaattaa tttgccccaa tattttgaaa tggagaatgg aatgcacaaa aaaaaggagt
     4981 tcccttccta ccgcatatag tagcgatagc gaactccaat aaaataaaca tgtttagttt
     5041 tacaaatgac agattctcac tatctataca atagcaatcc ctttggtatc aacttgaagg
     5101 cggtggacag ttccgtctag atttagttcc tctaatgcta gaacaatagc atcctcctta
     5161 tctttgggcg ctaataccat cactgttgga ccggcacctg ataagtaggt tgcataggct
     5221 cccaactcct gtgcagtttg cttgattgga caaaactcct taacaagtag ctgacgaaac
     5281 ggttcatgga acatatctga ctgaattgct ttcccagctt tttccagatc acctgccatc
     5341 aaactggcaa cagcaacgtt tgcaatggca ctagcagcca ctgctttctt gtaccccatc
     5401 tgagaaggca gtacacctcg gctttcaacc gtacgcagtg ggtagtttgg aataaaggca
     5461 acaaaacttg cttctgggaa ttctgttaca actgcctgta ctctcttatt aacatagcta
     5521 gagatgacta aattaccaaa aatcgctggg gccacattat cagggtgtcc ttcaatttct
     5581 gtagctttga gcaatttttc atccgctgtc atattcaaac ctgctaattg attagccaat
     5641 tcgataccag ctacgataac ggaactggat gaacccaaac cacgtgccaa gggaatatca
     5701 ctaatcattc tgatacgatg cggctgcaat cctttttcaa tctttaaagc tgtcttgatc
     5761 aaaagattgt tcttgtctga tggaacatgt tcaagattgt gctcaatcac ccattcatca
     5821 gtctcttcaa atacttcaat cgttagatat ttcgaaaggg caacacctac tgaatcaaat
     5881 cctggaccga tattagctga agttgctgga ataataattt tcattgctta ttctcccagt
     5941 actttaaagg tatttaagac agtaaagtct gtttctttac tcaatttgtc tgttacattt
     6001 tccaactgag tcttactcat ttcatgggtc acaatcacta ggcgagctgt ttctccatct
     6061 gcagcttgtt gcagaatttg cttgaaggaa atttcttcag aattgaagat ttctgctaaa
     6121 cgaagcattt ttccattttt atcaggcgca tcaattgaga aataatattc gctcttcaca
     6181 tcgcttgggg ctgccaattg aagtgggcgg ctatattcgt taaaagcttt gccgatagta
     6241 ttgtctttca agcgacgaac gatacgaata atgtcagcca taacacttgt tgcagtcggt
     6301 ttttgcccag cacccgggcc atagtacata gactggccga tgccgataga ttcgacaaat
     6361 acagcattca tcacaccgtt cacgcttgca agtggatgat ttttcggtag gaaggttgga
     6421 gatacttcgg cagcaatacc agaggtagtt tcttgaatat cacccacaag tttgatgaca
     6481 tagcccaatt cttgtgccac tgctacatct tctggcgtga tatttgagat acccttgtgt
     6541 gctacgtgtt caaaatcaac tgtcatcccg aaagcaaatt gactgaggat aacagccttg
     6601 taagccgcat caatcccctc aacgtcattt gttgggtcag attctgcata gccaagttcc
     6661 tgggctgttt gaagagcttt ttcgtaagtc cagccttcat caaccatctt ggtcaacatg
     6721 aagtttgaag taccattcaa tacacctagg atacgagtca ccttatcagc agccaatgag
     6781 ttaaccaagg tacgcaagat tggaatacca cccgcaactg cagcttcata ataaagcgca
     6841 agacctttct cttcagccaa ggcacgcaat tcgctaccat gaacagcaag taaatcctta
     6901 ttggctgtta caatatgctt gcctgcttcc aaggcacgtg taataaatgt ttttgctggc
     6961 tcaatacgtc ccatcagctc aactacaata gcgatatctt cgtcagccaa aatttcatca
     7021 atatttgtca caaaattgta attgtggcct gcagccaaga gacggtcttt ttctgcttca
     7081 tccttgacca aaaccttagc aacttcaata ctatcatgtg cggctttctc tattttttcc
     7141 tggttttctt ctaataaaaa tggcacacca ctcgcaacgg ttccaaatcc taataatcct
     7201 atcttaacta ccatgtgctc tcctttaaaa tgtatttctc ccattataac aaatattctg
     7261 actatttggc aaaaaatttg a
//
LOCUS       DBNFCX010000099         7255 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.099, whole genome shotgun sequence.
ACCESSION   DBNFCX010000099 DBNFCX010000000
VERSION     DBNFCX010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 7255)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7255)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7255
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.099"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..621
                     /locus_tag="AC1PJC_001901"
     CDS             <1..621
                     /locus_tag="AC1PJC_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003059249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HIP6620877.1"
                     /translation="KLGINRASYNKWESGKSTPNQKNLTALAKILDVPVTYFESEYNI
                     VNNYLQLSPDNQAKAEDFVEELLLSQQASNIIPLFSVQVLSDIQLSAGIGEGIFDEFE
                     TETVYSDEEQYGYDFAAWIEGDSMEPIYKSGEVALIRSNGFDYDGAVYALTWNDSVYI
                     KKLYRDEDGFRMVSLNKDYPEKFIPYEDEPRIVGLVVGHFMPVEGV"
     gene            624..851
                     /locus_tag="AC1PJC_001902"
     CDS             624..851
                     /locus_tag="AC1PJC_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015057765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620878.1"
                     /translation="MKLKDILELGTYGFNPDCKVEIFNMDNFEERLENEGFDEILIPQ
                     NEDAKIYPYAFLIEDSILIAMTDEDDNTNEP"
     gene            841..969
                     /locus_tag="AC1PJC_001903"
     CDS             841..969
                     /locus_tag="AC1PJC_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620879.1"
                     /translation="MNLKEMIYIKDERIIFTPYKIEYDITDYIGELIEELEKLKRR"
     gene            974..2389
                     /locus_tag="AC1PJC_001904"
     CDS             974..2389
                     /locus_tag="AC1PJC_001904"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003059255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Y-family DNA polymerase"
                     /protein_id="HIP6620880.1"
                     /translation="MGYIDYSIEPQSDIAFLDMKSFYASVECVDRGLHPLYTSLCVMS
                     RVDNAAGLILASSPMFKKVFGKANVERSYDLPFDINTRKFSYQNAWKQGIDVTPKYKS
                     FIEHWAKRTLIVPPRMDRYIEKNLEIQHIFQDYAAPDDILPYSIDEGFIDLTSSLSYF
                     ISDRSMSRKDMLDNVSAMIQRDIYRKTGIISTVGMSNSNPLLAKLALDNEAKKTATMR
                     ANWSYEDVETKVWAIPKLTDFWGIGSKTEIHLQKLGIHSIKELANFNPDILKKEFGKV
                     GVQLWFHANGVDESNVHEPYKPKSRGLGNSQVLPRDYRTQREIEIVLAEMADQVANRL
                     RSAHKKATVVSIHIGYSRTEMKKSINAQKKIEPANLPKTMVSHVLELFQKKYSSGAVR
                     QIGVSYSGFVDESYTLLSLFDDVEQIEKDNRLQTAIDVVREQFGFLAIQKGTVLTEGS
                     RNIERSKLIGGHSAGGLEGLK"
     gene            2386..2754
                     /locus_tag="AC1PJC_001905"
     CDS             2386..2754
                     /locus_tag="AC1PJC_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004254363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620881.1"
                     /translation="MIDRSYLPFQSAREYQDTKMQKWMGFFLSEHTSALSDDTNKVTY
                     MSDLSLEKKLLLLSQVYAGQLHTRIQVIEKNKRVSYTGTIPSLNKDFILIKTTTGHIN
                     LKLKDIISIELVEEVLYESA"
     gene            2741..3040
                     /locus_tag="AC1PJC_001906"
     CDS             2741..3040
                     /locus_tag="AC1PJC_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5960 family protein"
                     /protein_id="HIP6620882.1"
                     /translation="MNQLEFQRNHLQMDYYSESYQDFERDFYRYSNMNIPLTFLTDDI
                     LKIMATSRKNYFVLNKEKSRDNRDHFFIFEVSTLDENPLICRYSYKKTTTYLVQK"
     gene            complement(3102..4046)
                     /locus_tag="AC1PJC_001907"
     CDS             complement(3102..4046)
                     /locus_tag="AC1PJC_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000222594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
                     /protein_id="HIP6620883.1"
                     /translation="MTYTHLTTNELVMIEAYYKEGIAVSHICQSLKRSRQTIHKVIAY
                     LKAAHTAYDYYKDYKANKKRCGRRQTQLTQSEQDFIQRHLELNWSLDVVKGTYPDKIP
                     CSMRTLYRLADRGIFKKADLPWKGKRKPNGIAEKRGKQAFRRDIRERSEIYPDFDTEF
                     GHLEGDTIVGKHHKSAVVTLVEKQSKAIITLQTNGRKASDIEQSLNRWLSQFPKHLFK
                     SVTFDCGKEFSNWKTIANQHDIDIFFADPGCPGQRGLNEHSNGLLRRHGLPKQMDFNG
                     IPQKYLSAITDKRNRIPRKSLNYRTPYQVFLSYVKCLA"
     gene            complement(4409..4624)
                     /locus_tag="AC1PJC_001908"
     CDS             complement(4409..4624)
                     /locus_tag="AC1PJC_001908"
                     /inference="COORDINATES: protein motif:HMM:NF019151.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GmrSD restriction endonuclease domain-containing
                     protein"
                     /protein_id="HIP6620884.1"
                     /translation="MKTLKGLNAQFINFLHIYPQNPTELLPWENEELNCFGNLALITV
                     SGNSTFNNATPVGKASSNPGIIAQSLS"
     gene            complement(4906..7032)
                     /locus_tag="AC1PJC_001909"
     CDS             complement(4906..7032)
                     /locus_tag="AC1PJC_001909"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016475988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015662 - P-type ion transporter activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0140358 - P-type transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HIP6620885.1"
                     /translation="MNNNNKHLSHCHHNHGDMDHSKHEYVSTEEHGDHKNQHQEHHAE
                     HDHSGHSGHDHSGHGGHEHHHHGNFKELFLQSLPLGIIIMLLSPMYGFELPFQFTFPY
                     SDIVVAILSTILIIYGGRPFYQGAVDEFKQKEPGMMALVSLGISVSYLYSIYAVIITY
                     VTGGHVMDFFFEFASLLLIMLLGHWIEMKAIGEAGDAQAALAKLVPKDAHVVLEDDSI
                     EIRPVADLQVGDLIRVQAGENVPADGTIERGESRVNEALLTGESKAVKKGPGDEVIGG
                     STNGEGVLYIKVNETGDQSFISQVQNLISQAQSQPSRAENIAQKVAGWLFYIAVIVAL
                     IAFVVWMVIGDIPTAVIFTITTLVIACPHALGLAIPLVTARSTSLGASRGLLVKDRQA
                     LEIAQDADVMILDKTGTLTTGEFKVLDVKLLNDKYTKEEIIALLAGIEGGSSHPIAQS
                     IISFAKQQNIRPASFDSIDVISGAGVEGKAGGHRYQLISQKAYGRNLDMDIPKGATLS
                     VLVENDDAIGAVALGDELKPTSRELIKALKKNNIQPIMATGDNEKAAQGAAVDLGIEY
                     KSNQSPQDKYELVKTLKDEGKKVIMVGDGVNDAPSLALADVGIAVGAGTQVALDSADV
                     ILTQSDPGDIESFIELAHKTTRKMKQNLFWGAGYNFIAIPLAAGILAPIGITLSPALG
                     AILMSVSTVIVAINAILLNLDPKNNG"
     gene            complement(7052..7189)
                     /locus_tag="AC1PJC_001910"
                     /pseudo
     CDS             complement(7052..7189)
                     /locus_tag="AC1PJC_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006703336.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CopY/TcrY family copper transport repressor"
     gene            complement(7198..>7255)
                     /locus_tag="AC1PJC_001911"
     CDS             complement(7198..>7255)
                     /locus_tag="AC1PJC_001911"
                     /inference="COORDINATES: protein motif:HMM:NF019351.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HIP6620886.1"
                     /translation="CHILEHEEAGMMGQIKVE"
BASE COUNT         2235 a         1423 c         1307 g         2290 t
ORIGIN      
        1 aaattaggta ttaatagagc ttcatacaat aaatgggagt caggaaagtc caccccgaat
       61 caaaaaaacc ttactgctct cgccaaaatc ctagatgtac cagtcaccta tttcgaatct
      121 gagtacaata tcgtcaataa ctatcttcag ttatctcctg acaatcaggc aaaagcagaa
      181 gactttgtag aggagcttct tctttcccaa caagcttcaa acatcattcc actcttctca
      241 gtccaagtac tatcagatat ccagctctca gctggtattg gagaaggaat ctttgacgag
      301 tttgaaactg aaacggtcta ctctgatgag gaacaatacg gctacgattt tgccgcatgg
      361 atcgagggag actctatgga gcctatctat aagagcggtg aagtcgcact aattcgttca
      421 aatggatttg actatgatgg agctgtctat gcactaactt ggaatgactc tgtctatatc
      481 aaaaagctct atcgtgatga ggatggattt agaatggttt ccctgaataa ggactatcct
      541 gagaagttca tcccttatga ggatgaacca agaattgtcg gtctagttgt agggcacttt
      601 atgcctgtcg agggagtata gtcatgaaat taaaagatat tttagaactt ggaacatatg
      661 gtttcaaccc tgattgtaaa gttgaaattt tcaatatgga caactttgaa gagcgactag
      721 aaaatgaagg attcgatgaa attcttattc ctcaaaatga agatgcaaaa atctatcctt
      781 acgctttttt gatagaggat tctattttga tcgctatgac cgacgaggat gacaatacca
      841 atgaacctta aagaaatgat ttacataaag gacgaacgta ttatctttac tccttacaaa
      901 attgaatacg acatcacaga ctacatcggt gaacttatcg aagagctaga aaaactcaaa
      961 aggagataac cctatgggct atatcgacta ttctatagaa cctcaaagtg acatagcctt
     1021 cctcgatatg aagtcctttt acgcttcggt tgagtgtgtg gacagaggtt tgcatccact
     1081 ctacacatca ctatgcgtca tgagccgtgt tgataatgca gcgggattaa tacttgcttc
     1141 ctcccctatg tttaagaaag tattcgggaa agcaaacgta gagcgttcct acgacttacc
     1201 atttgacata aacactcgta aattcagcta ccagaatgcg tggaaacagg ggatagacgt
     1261 aacaccgaaa tataaatctt tcatcgaaca ctgggcaaag cgtacactca ttgttcctcc
     1321 acgcatggac agatatattg aaaagaattt agagattcaa catatctttc aagactatgc
     1381 tgctccagat gacattctcc cctattcaat tgatgaaggt tttatcgacc ttactagctc
     1441 actttcttac tttatttctg ataggtcaat gtctaggaaa gatatgttgg ataatgtttc
     1501 ggctatgatt caaagggata tttatcgcaa aacaggtatt atctcaactg tgggaatgag
     1561 taattccaac cctcttctag ctaaactagc tcttgataat gaagctaaga aaactgctac
     1621 aatgagagct aactggtcat acgaagatgt agaaaccaag gtatgggcta taccaaaatt
     1681 aacagacttt tgggggattg gtagtaaaac cgagattcat ttacaaaaac ttggtattca
     1741 ttcaatcaaa gaactagcca acttcaatcc tgatattctc aaaaaagaat tcggtaaagt
     1801 cggtgttcag ctatggtttc atgctaatgg tgttgatgag agcaacgtcc atgaacccta
     1861 taaaccaaaa tcacgaggat tgggtaattc tcaagtactt cctagagatt acagaacaca
     1921 aagagaaatt gaaatcgtat tagctgaaat ggctgaccaa gttgctaatc gactacgttc
     1981 agcccataag aaggcaactg ttgtttcaat ccatattggc tattctagga ctgagatgaa
     2041 aaaatctata aatgctcaga aaaaaataga accagcaaat ctcccaaaaa caatggtaag
     2101 tcatgtactt gaattattcc aaaaaaaata ctcctctgga gcggtgagac aaattggtgt
     2161 atcatatagt ggcttcgtag atgaaagcta tactctacta tcactctttg atgatgtaga
     2221 acaaattgaa aaagataata gacttcagac agctattgac gttgtcagag aacagtttgg
     2281 ctttttagcc atacaaaaag gaaccgtcct aactgaaggt tccagaaata ttgaacgcag
     2341 taaacttatt ggcggacatt ccgctggtgg attggaggga ttaaaatgat tgaccgttca
     2401 tacttaccat ttcagtcagc aagagagtac caggatacta agatgcaaaa atggatgggc
     2461 tttttcctat ctgagcatac atcagcactc tctgatgata caaacaaagt aacgtacatg
     2521 tctgatttat cactagagaa gaaattatta ctcctcagtc aagtatacgc tgggcagcta
     2581 cacacgcgca ttcaagtgat tgaaaaaaac aagcgtgttt cctacactgg gacaatacca
     2641 agtctgaata aggatttcat tttgataaaa actacaacag gtcacatcaa tttgaaatta
     2701 aaagacatta ttagtattga acttgtcgag gaggtgctct atgaatcagc ttgagtttca
     2761 gcgtaatcac ctgcaaatgg actattacag cgagagctac caagattttg aacgtgactt
     2821 ttaccgctac tccaatatga atattccatt gaccttcctg accgatgata tcctcaaaat
     2881 aatggcgact tcacgtaaga attactttgt cctcaataag gaaaagtcca gagataaccg
     2941 cgatcacttc ttcatatttg aagtaagtac cttagatgag aatccactaa tttgccgata
     3001 ttcgtataag aaaactacaa catatttagt acaaaaatag gagtgatgca aaagaccact
     3061 cctattttct atcgtctcat tatataaccc aaattgtcaa attaagctag acattttacg
     3121 taactcagaa aaacctgata tggtgttcga taatttaaag atttcctagg aattctattt
     3181 cgtttatcag tgatagctga taaatatttc tgaggaatac cattgaaatc catttgcttt
     3241 ggtagtccat gacgtcttaa taaaccattt gaatgttcat ttaacccacg ttgaccaggg
     3301 caacctggat ccgcaaagaa aatatcaatg tcgtgttggt tggctattgt cttccaatta
     3361 gagaattctt tcccacaatc aaaagtgaca gatttaaaga gatgttttgg gaattgtgat
     3421 agccatctat ttagcgactg ctcaatgtcg ctagcttttc gaccattggt ttgaagtgtg
     3481 ataatagctt tagattgctt ctctaccaag gtgacaacag cacttttgtg atgtttacca
     3541 acgattgtat ctccttcaag atgtccaaat tctgtatcaa aatctggata gatttctgaa
     3601 cgctcacgga tatccctcct aaaagcttgt ttgccacgtt tttcggctat accatttggt
     3661 ttgcgttttc ccttccatgg taaatcagct ttcttgaaga taccacggtc agctaggcga
     3721 taaagagttc tcatagaaca agggatttta tcgggataag ttcctttgac aacatccaaa
     3781 ctccaattaa gttctaaatg cctttgaata aaatcttgtt cactttgagt gagttgggtc
     3841 tgacgacgac cacaacgttt cttgttagct ttgtagtcct tgtagtaatc ataagcagtg
     3901 tgggcagcct tgagataagc aatgacctta tgaatcgttt gtcttgatct tttgagggat
     3961 tgacaaatat ggctaacggc tattccttct ttgtaataag cctctatcat gacaagttca
     4021 tttgtggtaa gatgggtata ggtcatttat gttagttcct ttcagacaaa tgtggtgttt
     4081 atctgagcct aacataaatg gcttttttct gtctagctta attttacaaa ttaggaaatt
     4141 aaaataacta ttttattgaa gcaactagat tcttaggaat tattttttct ataatatcta
     4201 attgcgccga atatactggt acttcttcct tttaaatgaa atgtttaggt tttattggct
     4261 tatcaaaata gattggtttg caagaatatc tctactctca tctacccttt ttgggagacg
     4321 agaattttaa acatctcgtc ctgatgaata tgtgccaatt tttggtccca aatattgtta
     4381 ttttgtttca tcatttcagc catgattttc agctcaaact ctgcgcaatt attcctgggt
     4441 ttgaactagc tttgccaaca ggcgttgcat tattaaacgt tgaattaccg gagaccgtaa
     4501 tcaaggctaa attaccaaag caattcagct cttcattttc ccaagggagc aactctgttg
     4561 gattttgcgg atagatatga agaaaattta taaattgtgc atttaagccc ttcaaagtct
     4621 tcaactttaa acattagcgg cttgtaactt tcaaatcgct gattgatgtt gtcatagtat
     4681 atcattgttg aaaaagccca caaagcacct acgattagta cgagtacagt gagcacaatc
     4741 attcgtactc ttgatttttt tgagtttctc attaaaaatc gtgttggtag aaaaatcgtc
     4801 tacttctacc aacacgattt tacaaagagc cagtacttac atctcttttt ctcctgtaaa
     4861 actattgtat cttgatactt taatgagttt caatcattcg atctgttaac cgttattttt
     4921 gggatctaaa tttaataaaa tagcattaat ggcgacgatg actgttgaca cagacattag
     4981 aattgctcct aatgcagggc ttaatgtgat accaatagga gccaaaattc ctgcagctag
     5041 agggatagct ataaagttat aaccagctcc ccaaaatagg ttttgtttca ttttacgagt
     5101 tgttttgtgt gctaattcaa tgaatgattc aatatctcct ggatcggatt gagtcaatat
     5161 gacatcagct gaatccaatg caacttgagt tccagcacct acagctatac caacatctgc
     5221 taaggcaaga gaaggagcat catttacacc atcacctacc atgataactt tctttccttc
     5281 atctttaagt gttttaacta actcatattt gtcttgtgga gattgatttg atttatattc
     5341 aatccctaaa tctactgccg cgccttgagc cgctttttca ttatcacctg ttgccataat
     5401 tggttgaata ttgttctttt taagagcttt aattaactct ctactcgttg gttttaattc
     5461 gtcccctaaa gctacagcac caatggcatc atcgttttct actaagacac taagagttgc
     5521 tccttttgga atatccatat caagattacg tccataggct ttttgactga ttaattggta
     5581 acggtgccca cctgctttac cctctactcc agcaccggaa atcacatcaa tcgaatcaaa
     5641 agatgctgga cgtatatttt gctgcttagc gaaacttata attgattgag caattgggtg
     5701 gctagatcct ccttcaatac ctgccaataa ggcaatgatt tcctcttttg tatatttgtc
     5761 attaagaagt tttacatcta atactttaaa ttcaccagtt gttaaagtac ctgttttatc
     5821 taaaatcatc acatctgcat cttgagctat ttctaaggct tggcggtctt tcactagtaa
     5881 cccacgactg gctcctaagc ttgtgctacg ggcggtgacc aatggaatag ccagacctaa
     5941 tgcgtgtgga caagctataa ctaatgtcgt gatagtaaag ataactgccg ttgggatatc
     6001 tccaataacc atccacacta caaaagctat tagtgcgaca atgaccgcaa tatagaagag
     6061 ccaccctgca accttttgag caatattttc tgccctggaa ggctgacttt gagcttggct
     6121 gattaaattc tgaacttgag agatgaagga ttgatcacct gtctcattca ctttaatata
     6181 aagaacccct tctccatttg ttgagcctcc gattacttca tcgccaggac cttttttaac
     6241 tgcttttgat tctccagtca aaagagcttc attcacacgt gattcgccac gctcgatagt
     6301 tccgtctgct ggcacatttt ctccggcttg aacacgaatt aaatctccta cctgtaagtc
     6361 agcaactgga cgtatttcaa ttgaatcatc ttctaacaca acgtgagcat cttttggtac
     6421 caacttagcc aatgctgctt gtgcgtctcc tgcttctcca atagctttca tctcaatcca
     6481 gtgacctaat aacatgatta ataataatga agcaaattca aagaaaaagt ccatcacgtg
     6541 tccacccgtt acgtaggtaa tgataacagc ataaatactg tataaatatg aaacacttat
     6601 acctaaagaa actagagcca tcattccagg ttctttttgt ttaaattcat caactgcgcc
     6661 ttgatagaat ggacgtccac cataaataat taatatagta gataaaatag ctactacaat
     6721 atcagaatat ggaaaagtaa actggaatgg tagttcaaat ccatacatag gagataagag
     6781 cataataatg attcctagtg gcaatgactg taagaaaagt tccttaaagt taccgtgatg
     6841 atggtgttca tgccctccgt gcccactgtg gtcatgccca ctgtgcccgc tgtgatcatg
     6901 ctcagcatga tgttcttgat gttgattctt atggtctcca tgttcttccg tgcttacgta
     6961 ctcatgtttt gaatgatcca tgtcgccatg attatggtga cagtgggata aatgtttgtt
     7021 attattgttc attttaaatt cctccttatt cttaatgatg atgtaaatga cactcgcatt
     7081 gtctttctgg acaattgcaa tccacttctt ctactgcgaa agattttttt atctctaata
     7141 ttttttctag tcgatctata tcatcgaagc ttaagacatg atcttcaata ttatttatta
     7201 ttctacttta atttgtccca tcatacctgc ttcttcatgt tcaagaatgt gacag
//
LOCUS       DBNFCX010000100         7239 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.100, whole genome shotgun sequence.
ACCESSION   DBNFCX010000100 DBNFCX010000000
VERSION     DBNFCX010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 7239)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7239)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7239
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.100"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(39..695)
                     /gene="phoU"
                     /locus_tag="AC1PJC_001912"
     CDS             complement(39..695)
                     /gene="phoU"
                     /locus_tag="AC1PJC_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000946475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0030643 - intracellular phosphate ion
                     homeostasis [Evidence IEA];
                     GO_process: GO:0045936 - negative regulation of phosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HIP6620887.1"
                     /translation="MLRAQFEEELGKLHNQFYAMGNEVLAQINNAVRAFTTHDRELAK
                     EVIEADKKINAFEVKLEKKSLEIIALQQPVSTDLRRVITVLKATSDLERMGDHAVSVA
                     KAAIRMKGEVRIPVVEEEIKKMGREVRQLVEETLELYLGDADMERAYEVAARDEVVNE
                     FYSTIQELTTEEIKKNPESLVAGRDYYQVLTYLERVGDYAKNICEWVVYLRTGDITEL
                     "
     gene            complement(724..1482)
                     /gene="pstB"
                     /locus_tag="AC1PJC_001913"
     CDS             complement(724..1482)
                     /gene="pstB"
                     /locus_tag="AC1PJC_001913"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014294590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HIP6620888.1"
                     /translation="MTSPILQVKDLSVYYNKKKALNNVSIDFYPNEITALIGPSGSGK
                     STLLRSINRMGDLNPEVTLTGAIDYNGKNIYSPRTDTVDLRKEIGMVFQQPNPFPMSI
                     YENVVYGLRINGIKDKQVLDEAVERSLIGASIWNEVKDRLHDSAVGLSGGQQQRVCVA
                     RVLATSPKIILLDEPTSALDPISAGKIEDTLYGLKDKYTMVLVTRSMQQASRISDRTG
                     FFLDGDLIEYNLTKEMFLNPANKETEDYITGKFG"
     gene            complement(1494..2297)
                     /gene="pstB"
                     /locus_tag="AC1PJC_001914"
     CDS             complement(1494..2297)
                     /gene="pstB"
                     /locus_tag="AC1PJC_001914"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000852852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HIP6620889.1"
                     /translation="MADYNWNERHIITFPEENIALSTKDVHVYYGKNEAIKGIDMQFE
                     KNKITALIGPSGCGKSTYLRSLNRMNDTIDIAKVTGQILYEGIDINRPDMNVYEIRKH
                     IGMVFQRPNPFAKSIYRNITFAHERAGVKDKQVLDEIVETSLKQAALWDQVKDDLHKS
                     AFTLSGGQQQRLCIARAISVKPQILLMDEPASALDPIATMQLEETMFELKKDYTIIIV
                     THNMQQAARASDYTAFFYLGDLIEYDKTANVFQNAKLKSTSDYVSGHFG"
     gene            complement(2322..3209)
                     /gene="pstA"
                     /locus_tag="AC1PJC_001915"
     CDS             complement(2322..3209)
                     /gene="pstA"
                     /locus_tag="AC1PJC_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019316415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HIP6620890.1"
                     /translation="MHAKKFDKLATGILYSIAGVIVVILTSLILYILLRGLPHVSWDF
                     LTSKSSSYKAGGGIGIQLYNSFFLLVVTLLISVPLSTGAGIYLAEYAKKGPLTNFIRT
                     CIEILSSLPSVVVGLFGYLIFVVQFEYGFSILSGALALTVFNLPQMTRNVEDSLRHVH
                     HTQREAGLALGLSRWETVLHVVIPEALPGIVTGIVLASGRIFGEAAALIYTAGQSAPA
                     LDWSNWNPLSVTSPISIFRQSETLAVHIWKVNSEGTIPDATQVSAGSAAILLVFILIF
                     NLSARYIGKKLHAKMTSAA"
     gene            complement(3199..4116)
                     /gene="pstC"
                     /locus_tag="AC1PJC_001916"
     CDS             complement(3199..4116)
                     /gene="pstC"
                     /locus_tag="AC1PJC_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018378778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HIP6620891.1"
                     /translation="MKNEQLAKELSSPSKNSRLEKFGKVITFLCLSLIVFIVAMILIF
                     VAQRGLSTFFVDGVSITDFLFGSKWEPSSKIFGALPMISGSFIVTILSAVVATPIAIG
                     AAVFMTEISPKRGAKILQPVIELLVGIPSVVYGFIGLQVVVPFVRSIFGGTGFGILSG
                     VFVLFVMILPTVTFMTVDSLRAVPRHYREASLAMGATRWQTIWRVILNAAKPGIFTAV
                     IFGMARAFGEALAIQMVVGNSAVIPTSLTTPAATLTSVLTMGIGNTVMGTVQNNVLWS
                     LALVLLLMSLIFNMIMKFITREGKKNYAR"
     gene            complement(4119..4988)
                     /locus_tag="AC1PJC_001917"
     CDS             complement(4119..4988)
                     /locus_tag="AC1PJC_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS family protein"
                     /protein_id="HIP6620892.1"
                     /translation="MKKKQKLGIVALFLLSSMALSGCSSWIDRGESITAVGSTALQPL
                     VEAAADEFGSVNIGKSVNVQGGGSGTGLSQVQSGAVQIGNSDVFAEEKDGIDASKLVD
                     HQVAVAGLAVIVNEQVSVKDITTEDLRKIFTGEITNWKELGGKDLEISIINRAASSGS
                     RATFDSVIMDGKTAAQSQEQDSNGMVKSIVAQTPGAISYLSFAYLDDSVKTIKLNGFE
                     PTAENVATNDWPIWSYEHMYTMGKATDLTEEFLDYMMSDEVQNGIVESMGYISINDMK
                     VVKSADGTVTEKE"
     gene            complement(5126..6427)
                     /locus_tag="AC1PJC_001918"
     CDS             complement(5126..6427)
                     /locus_tag="AC1PJC_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmF rRNA methyltransferase first C-terminal
                     domain-containing protein"
                     /protein_id="HIP6620893.1"
                     /translation="MQLPQDFIDKYNHLLGSEAQAFFESFEQDPISGFRTNPLKERQL
                     DFERPIPNMTWSYYGKVSGKSPEHVTGLVYSQEPAAQVVGQIAAPEKGMKVLDLAAAP
                     GGKSTHLLSYLENTGLLVSNEISNKRAKILAENIERFGARNVVVTNESADRLVKVFPG
                     YFDMIVLDAPCSGEGMFRKDPDAIQYWSKHYPAQCASLQREILESALNMLAPDGQLIY
                     STCTWSPEENEEVVTWLLEQYDLELIDIPKINGMVEGVGYPEVARMYPHHFAGEGQFV
                     AKFIFLGEASQKKLKPGKSNLNREQQSLWKEFEQKHLRVQLDGLLQVFGDNLYLLPHG
                     LPDLSKVKIARNGLHLGTFKKKRFEPSFALGLALHSSEVKNRVEISLEEFSSYTAGHT
                     IAVSKDLANGWYQVAVQGNGLGFAKIVSGTLKNGFPKGLRF"
     gene            complement(6427..7185)
                     /locus_tag="AC1PJC_001919"
     CDS             complement(6427..7185)
                     /locus_tag="AC1PJC_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HIP6620894.1"
                     /translation="METKYHFAQTIVLEAGNFLRQHLHDDLQIEEKGDFTDLVTHLDK
                     QVQEMLTQQIQSRYQGDGILGEEGGDVSSIHEGNVWVIDPIDGTTNFIAQKTDFAIMI
                     AYFENGVGKFGIIYDVMRDKLFHGGDSFPVYCNQERLKKPELRPLRQSLIGINAKLYA
                     GNAHGVAELANQSLGTRSVGSAGIGFAHVLEGRLFAYASYLCPWDYAAASIIGSSLGL
                     VMLSFDGPSLAYDKREFVMLVSESHLEEVKGYIF"
BASE COUNT         2174 a         1629 c         1312 g         2124 t
ORIGIN      
        1 tttattacat aaaaaagaag ccctctcgga cttctgaatt acaactctgt aatatcacct
       61 gtgcgtaggt agacaaccca ctcacaaatg tttttagcat aatcaccgac acgttccaag
      121 taggttaaaa cttggtaata gtcgcgacca gcaaccaagg attctggatt cttcttgatt
      181 tcttccgttg tcaattcttg aatagttgaa tagaattcat tgacaacctc atcacgtgct
      241 gctacttcat aagcgcgctc catatcagca tcacctaagt agagttccaa agtttcttct
      301 actaattgac gaacttcacg tcccattttc ttgatttctt cttcaacaac tgggatgcga
      361 acttctccct tcatacggat agctgcttta gcaactgaga ctgcatggtc tcccatacgc
      421 tccaaatcac tagttgcttt caagactgtg ataacgcgac gaagatctgt tgagacaggt
      481 tgttggagag caatgatttc aagtgatttt ttctctaatt tcacttcgaa agcattaatt
      541 ttcttatctg cttcaatgac ttcttttgct aattcacgat catgagttgt aaaggcacga
      601 acagcattat taatctgagc caatacttca tttcccatgg cgtaaaattg gttatgaagt
      661 tttcctaatt cctcttcaaa ttgagctctt aacatgtgaa cctctttctt tttcttatag
      721 gccttagccg aacttacctg taatgtagtc ttctgtttct ttattggcag gattcaagaa
      781 catttctttt gtcagattgt attctatcaa atcgccatca aggaagaaac ctgttcgatc
      841 tgaaatacgt gatgcctgtt gcatagaacg tgttactagc accattgtat acttatcttt
      901 cagaccataa agtgtgtcct caattttacc agctgagatt gggtcaaggg ctgaagttgg
      961 ctcatccaac aaaataattt ttgggcttgt tgccaataca cgggccacac atacacgttg
     1021 ctgctgacca cctgaaagtc caactgctga gtcatgcaag cgatctttca cttcattcca
     1081 aatagaagca ccaatcaagg aacgctcaac tgcttcgtcc aagacctgct tgtccttgat
     1141 accgttaata cgtaaaccat aaacgacatt ctcgtagata gacatcggga atgggtttgg
     1201 ttgttggaat accataccga tttccttacg aagatcaaca gtatccgtac gaggactgta
     1261 tatgttcttt ccgttgtaat caatcgcacc tgtcaatgtt acctctgggt ttaaatctcc
     1321 catacggtta atagaacgca agagggttga cttaccagaa ccagatggtc caatcaaagc
     1381 agtaatttca tttggataga aatcgattga cacattattc aaggcttttt tcttgttata
     1441 gtaaacagac aaatctttta cttgtaaaat aggtgatgtc atttgttccc tttctatcca
     1501 aaatgtcctg aaacgtagtc actagttgac ttgagttttg cattctggaa gacgtttgct
     1561 gtcttatcat attcaatcaa gtcacccaga tagaagaaag ctgtgtaatc acttgcacga
     1621 gctgcttgtt gcatattgtg cgtaacaatg ataatggtgt agtccttctt caattcaaac
     1681 atagtttctt ctaactgcat agtcgcaatc gggtccaagg ctgatgcagg ctcatccata
     1741 agcaagattt gtggttttac agagatagct cgtgcaatac acaaacgctg ttgctgtcca
     1801 cctgataagg taaaggctga cttgtgcaag tcatctttta cctgatccca aagggctgct
     1861 tgtttcagag aagtttcaac aatctcatcc aaaacctgct tatctttcac gccagcacgt
     1921 tcatgtgcga atgtgatgtt acggtaaata gattttgcaa atgggttggg acgttggaat
     1981 accattccga tatgcttacg aatttcgtaa acgttcatat ctggtctatt gatgtcgatt
     2041 ccttcataaa gaatttgacc ggttacctta gcaatatcaa tagtatcatt catacgatta
     2101 agactgcgaa gataggttga tttcccacac cctgatggtc caatcaaggc tgtaatttta
     2161 tttttttcga actgcatatc aatgcccttg atcgcttcat ttttaccata gtaaacatga
     2221 acatcttttg tcgaaagggc gatattctcc tctggaaaag taatgatatg gcgttcattc
     2281 cagttgtaat ctgccatttt ttctccttat aagtcagact tctaggctgc tgaagtcatt
     2341 ttcgcatgaa gtttcttacc gatatatcgt gcagaaaggt tgaaaatcaa gataaatacc
     2401 aagaggattg ctgctgaacc agcagaaact tgggttgcat ctggaattgt accttcgctg
     2461 tttaccttcc agatatgaac cgcaagggtt tctgattgac ggaagataga aatcggacta
     2521 gtaacactca atggattcca gtttgaccag tcaagagctg gagctgactg accagccgtg
     2581 tagataagag ctgctgcctc accgaagata cgaccagatg ccaagacgat acctgttaca
     2641 atacctggaa gagcttcagg aataaccaca tgaagaactg tttcccaacg tgataatcca
     2701 agggccaaac cggcttcacg ttgtgtgtgg tgaacgtgac gaaggctgtc ctctacgtta
     2761 cgtgtcatct gtggtaagtt gaagactgta agagccaagg cacctgataa gatagaaaaa
     2821 ccgtactcaa actgaacaac gaaaatcaag taaccaaaca aaccaacgac aacggacggt
     2881 agggatgaca aaatctcaat acaggtacgg ataaagttag tcaatggacc ttttttagca
     2941 tattcagcca aataaatacc tgcaccggtt gacaagggaa cagaaattaa gagcgttaca
     3001 accaatagga agaatgagtt gtagagctga attccaatac caccgccagc tttgtaagat
     3061 gaagatttac ttgtcaaaaa atcccagctt acatgtggca gaccacgtag caagatgtaa
     3121 agaatcagtg acgtcaagat aacgacaatc acaccagcga ttgagtaaag aataccagtc
     3181 gccaatttat caaatttttt agcgtgcata gtttttctta ccctctctcg taataaattt
     3241 cataatcatg ttaaagataa ggctcatcaa gagcaagact agggccaagg accataggac
     3301 gttgttctga acagttccca taaccgtatt accgataccc attgtcaaaa cagaagtcaa
     3361 agtcgctgct ggcgttgtca aggaagtcgg gataaccgct gagttaccaa ctaccatctg
     3421 aatcgccaag gcttcaccaa aggcacgcgc cataccaaag ataacagccg taaaaatacc
     3481 tggcttagcc gcgttcaaaa taacacgcca aatcgtctgc caacgagtgg ctcccatagc
     3541 caaacttgct tcgcggtagt gacgaggtac tgcacgcaaa ctgtcaaccg tcataaaggt
     3601 tactgttggc aaaatcataa cgaaaagtac aaatacaccc gacaagatac cgaaacctgt
     3661 tccaccgaag attgaacgta caaatggcac aactacttgc aaaccaatga aaccatatac
     3721 aaccgatgga ataccgacca aaagttcgat aacaggttgt aagatttttg caccacgttt
     3781 tggtgatatt tctgtcatga agactgctgc accgattgcg ataggggtcg caacaacagc
     3841 tgacagaatc gtaacaatga aagaacctga aatcattggc agggcaccaa atattttcga
     3901 gcttggttcc cacttgcttc caaataagaa atcagtgatg ctcacaccgt caacaaagaa
     3961 agtcgataat ccacgctgcg caacgaaaat caaaatcatt gcaacaataa agacaatcaa
     4021 tgatagacaa aggaatgtaa ttaccttacc aaacttctct aatcgagaat ttttagatgg
     4081 agacgataac tcttttgcta gttgttcgtt tttcatgctt actccttctc agtcaccgtg
     4141 ccatcagcac ttttcacaac tttcatatcg ttgatagaaa tgtatcccat actttcaacg
     4201 ataccatttt gaacttcatc tgacatcatg taatctaaaa attcttctgt caaatcagtc
     4261 gcttttccca tcgtatacat atgctcatag gaccaaattg gccaatcatt tgttgctaca
     4321 ttttcagcgg ttggttcaaa accgtttagc ttaattgttt taacggaatc atctagataa
     4381 gcaaatgata ggtaggaaat tgcacctggt gtctgagcaa caatagattt taccataccg
     4441 ttagaatctt gttcttgact ctgagctgcg gtttttccat ccatgataac actatcaaag
     4501 gtcgcacgtg aacctgaact agctgcacgg ttaatgattg aaatttccaa atccttacca
     4561 cccagctctt tccagttggt aatctcacca gtaaaaattt tacgcagatc ttctgtagta
     4621 atatctttaa ccgatacttg ctcatttaca ataacggcca aaccagctac tgctacttga
     4681 tggtcaacaa gtttacttgc atcaatacca tctttttcct cagcaaatac gtcagagtta
     4741 ccaatctgaa cagctccaga ctgaacttgt gacaagccag tacctgaccc tccaccctga
     4801 acgttgacag atttaccgat attgacacta ccaaattcat ctgctgctgc ctcaacaagt
     4861 ggttgaagcg ctgtcgaacc tacggctgta atagactctc ctcgatcgat ccaagaagaa
     4921 caacctgaaa gagccatact actcaaaaga aacaaagcta caattccaag cttctgcttt
     4981 tttttcattt cgttttttcc tttacatttt tcagtggaat ctcctaaaat taactctgta
     5041 ttttacatag aatttacaag atatttccac tcatccacta tatcatataa aaagacaagt
     5101 tgcaaaaaaa atctgctgat ttattttaaa atctcagccc ttttggaaag ccatttttaa
     5161 gcgttccaga tacaattttt gcgaaaccaa gaccgttccc ttgaactgct acctgatacc
     5221 agccattagc taaatccttg gaaacagcta ttgtatgtcc agcagtatag gacgagaatt
     5281 cttctaagct gatttccact cgatttttaa cctccgaact atggagtgct agacctaaag
     5341 caaaacttgg ttcaaatctt tttttcttaa acgtccccaa gtgaagacca tttcgagcaa
     5401 tctttacttt tgacaaatca ggaaggccgt gtggcagtag atagagattg tccccaaaaa
     5461 cctgcagtaa accatccaat tgaaccctta aatgcttctg ttcaaattct ttccagagag
     5521 attgctgttc tctattcaaa ttggattttc ctggttttaa ttttttctga ctggcttccc
     5581 ctagaaatat aaatttggca acgaactgac cttctcctgc aaaatggtgg ggatacatac
     5641 gagcaacttc tggataaccg actccttcta ccattccatt gattttagga atgtctatta
     5701 gttccaaatc atactgttct aagagccacg tcactacttc ttcattttcc tctggtgacc
     5761 aagtgcaagt agaataaatc aattgaccat ctggagccaa catgttcaag gccgattcta
     5821 aaatttcacg ctgtaagctg gcacattgtg ctggataatg tttggaccaa tattgaatcg
     5881 catcggggtc ttttcgaaac atcccttcac ctgaacaggg agcgtctagg acaatcatat
     5941 cgaaatatcc tggaaagacc ttgaccaaac gatcggcaga ttcatttgtt acaacaacat
     6001 tcctcgctcc gaaacgctca atattttcag ccaatatttt tgctcgtttg ttagaaattt
     6061 cattactaac caagagcccc gtattttcta agtatgaaag caagtgagta gactttcctc
     6121 ctggcgctgc tgccaagtcc aatactttca tccctttttc cggggctgca atctgaccga
     6181 caacctgtgc agctggctct tgtgagtaga ctaagccagt tacatgttct ggagactttc
     6241 ctgagacctt accatagtat gaccaagtca tattagggat tggtcgctca aagtctaatt
     6301 gcctttcttt aagaggattt gtgcgaaatc ctgagattgg gtcttgttca aaactctcaa
     6361 aaaatgcttg ggcttcacta ccaagcaaat gattatattt atctataaaa tcctgtggta
     6421 attgcattag aatatatacc ccttcacttc ctcaagatgg gattctgata ctagcatgac
     6481 aaactctcgc ttatcatagg ccagactcgg accatcaaaa cttaacatga ctaagcctaa
     6541 agaggaacca ataatactgg ctgctgcata gtcccaggga cacagataag aagcataggc
     6601 aaataatctt ccttccagaa cgtgggcgaa accaattcca gcgcttccta cagatcttgt
     6661 acctaaactt tgatttgcta attctgccac tccatgtgca ttgcctgcgt acaactttgc
     6721 attgattcct atcaaactct ggcgaagagg gcgcagctct ggtttcttta agcgttcttg
     6781 attgcaataa acagggaatg aatctcctcc gtggaaaagt ttgtctcgca tgacatcata
     6841 aatgatacca aactttccta ctccattttc aaaataggca atcataatgg caaaatcagt
     6901 tttctgagca ataaaatttg tggtgccatc aattggatca ataacccaaa catttccctc
     6961 atgaatagaa gaaacgtctc caccttcctc acctaaaatc ccatcacctt gatagcgaga
     7021 ttgaatctgt tgagtcaaca tttcttgcac ttgtttatca aggtgcgtta ccaagtctgt
     7081 aaagtcacct ttttcttcaa tctgaagatc atcatgtaaa tgctgtcgga gaaaatttcc
     7141 agcctccagg acaatcgttt gggcaaagtg atacttagtt tccaaaacga ataactcctt
     7201 tccccctatc tcgagcagcc ttaacaactc gataggttg
//
LOCUS       DBNFCX010000101         7049 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.101, whole genome shotgun sequence.
ACCESSION   DBNFCX010000101 DBNFCX010000000
VERSION     DBNFCX010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 7049)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7049)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7049
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.101"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            105..443
                     /locus_tag="AC1PJC_001920"
     CDS             105..443
                     /locus_tag="AC1PJC_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000546747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620895.1"
                     /translation="MVGEWYRSSKGIKECFENHGEFENLEHQLEELGILFEGDFDGLV
                     TSQFIEHSCTALKELFFKEDCEYGYIGSTVHYLGEGWMYFLYDSDKLTLSEARKMADS
                     HFRKKLKIKH"
     gene            735..1253
                     /locus_tag="AC1PJC_001921"
                     /pseudo
     CDS             735..1253
                     /locus_tag="AC1PJC_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941630.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0030420 - establishment of competence for
                     transformation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
     gene            1423..6795
                     /locus_tag="AC1PJC_001922"
     CDS             1423..6795
                     /locus_tag="AC1PJC_001922"
                     /inference="COORDINATES: protein motif:HMM:NF019216.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ZmpA/ZmpB/ZmpC family metallo-endopeptidase"
                     /protein_id="HIP6620896.1"
                     /translation="MNLHFLQKKHHFGIRKFSIGVVSVALAISFSVAGGQVAAAQEAT
                     QAPVSSQQTSQPVTDEPSQEQETNEVAVQTPETVGSILNEATQENLAQESQLVEVEPA
                     IQKEVVSQDISAPQAALPAEEQSNPAGDENTLPAENFHQVAEPVEPKSIQTAQEPVGS
                     TDEATQPVQSTETAAVEGVVQPVLRSARRARSVAVTEVAKLPLDAQGQLMTSVSGATV
                     HKFQVLNSDGSSQIVEAQATDQIQKTSDISDKVNQIKQELSAITYDSLYPSLNNYERI
                     YDKTDMDSIIAKENPGRTFTEAEKVVLRNKYYMDQLDMRDSFTRVQGDLEHILTGLFE
                     KSNQVDIETIKTNKEKVLLGLTYLDRQFSFKFGNYQAKDLILYHPEVFGGTGDVLTNL
                     YTIGSQNYQDLLLAQSATTFKNKVAGQLGQTDVFSFVEKGLSIFDKDKTNSEWLKEES
                     KALIVEATNSYGPTTTLYEKLKSDTRLANHLLPLLSLPSESVYVLSTSNTVSYGLTET
                     YLGQAPATADFKQKLSDYAYHQQEFLNFWYRMTQRKQEFANHPPIIVVDTVQKYGQSG
                     NARDLYSPKFGSTVLKGVREFIVPLNLYANFVFAGGQASGTSRMNNFLYKLLTNDGHE
                     VYTHELTHMLDKTIWLNGYGRRSGQLQEVFARGLFESRNMSAATVSDPIFNLNTAYTI
                     SGARTQNSHPNRFQTTEDMKTYMQGILDVIYTLDYAEAEAILKQTADDRAVLLNQIRL
                     VPDTTNTRGGMTEEVLPIDASTAANLQTVADFVDQGMISGRYKLNGMATRGVAKTNQY
                     HTIPLFEPIYAALQNDTGSGGDISFKRNAYEILGEYGYENGMVAYLSDQHANDQAALN
                     AIMPEYKGNLATFKKAMFDRRIAKVSQLKSTSEASDFAAIQSEMDKAIAKDLQQLKAN
                     ANNNVLLSTGINAVRDLKNKIFQAYLQATNDFRTSIYSEPKARELYVTNGSETSTEGQ
                     GTETSPYQSLSYALAQAKDGDTIKLVSDILHRDGQNFVTNFVIDKAVTIDGRGNKLNL
                     RGLNLLTKKDVNLTNLKLEMIPDGGQQPKIYADGNHLTFDNVSTTISQAQTDLRPILI
                     AGSLTDNPSGSHGQITITNGSSDTRFNTIYAGNVDSASSIPVTISILSDFVNADNGII
                     LSGVNGDFVEGPVAVISKSSSLKSIDGSASLDNTVTIDTARVYGLNLQNIQTLELVNK
                     ADVSLASQVSDIATGVKLASGTQLTIDNNPVTLGELSGQGKVIIPATASLVVTGDIQD
                     NVQVLVRGFEQALVQNVNKDYVIAEGWTSPNASIALENGYNRFALVQDGAAYRLIEPT
                     QTPQDIQVQLRFKDGERVVKEESLTLPAGSSVTDLVARLPQPARGHYAISSSFDQTQL
                     NNLQTSKTVEIPLELVKVFDKTAIMALELVASPTKLVYRPADTVDLSGLQVRLVDNQG
                     LSKTITPDQFGEYGVELVPVTLTPQVTSLQLRKDTHELAIPIQVTPWKADVYAVTVGE
                     KHVYETDDNLTAVETAVLAKVQVDAQAGPVEKSFVNPLPTTLGEHSVPVLVRFDDGSQ
                     KRVFVQVVVQHTAKGEGVTHELPQGVLPPLETAKGEGVTHELPQGVLPPLETAKGEGV
                     THELPQGVLPPLETAKGEGVTHELPQGVLPPLVTAKGEGVTHDLPQGVLPPLVTAKGE
                     GVTHELPQGVLPPLETAKGESLLFDRPILTVDEMLRRLTTGQSMSKGILVDFENSSNP
                     AAKEKVAPVFSVRSRIGTNGQLPATGDKNNNLALLGIMSAICQIIFLKVRRRSDVAIF
                     TDRKNK"
BASE COUNT         2159 a         1309 c         1552 g         2029 t
ORIGIN      
        1 gaaaagttat tgcttttatg aaataactga tagatgaagc ttgcattaac ttgcaaaaat
       61 atatataatg aattataaat atttgaaagg aataggtaac aattatggtt ggtgagtggt
      121 atcggtcctc taaaggaatc aaggaatgtt ttgaaaatca tggtgaattt gaaaatttag
      181 aacatcaatt agaagaacta ggaatattat ttgagggaga ttttgacggc ttggttactt
      241 cgcaatttat agaacattcc tgtactgcgc tgaaggaatt attttttaaa gaggattgtg
      301 aatatggata tatagggagc actgtccatt atttgggaga gggttggatg tatttcttat
      361 atgattctga taagttaact cttagtgagg caagaaaaat ggctgatagt cattttagaa
      421 aaaaactaaa aattaaacat taacagattt aaactctaaa aaatggtcgt ttcatttagg
      481 aacggctatt ttttacaaca aatttataat tgataaaggt ttgaaattgc agtaattgag
      541 tttgatgagt ttttggtgtg agtacggttg aaggaggtaa cattgagata ggaaaagtaa
      601 cttttacgtt ttaaaattca atagttgtat cagtttggta agacgccttg tttgaaaaat
      661 atttgaattt gtggcagcat cgtcatgagt atgtaagtat tatagacttt agtttaaaaa
      721 tcatttcagg ctaaatcggt cggattttcg tgtcgccggg aagtctgaca gtgcctgact
      781 ttgtagcgac tttgaaagaa atcaatgctc ctgtccatgt ggtaaaagtg ggcgaccgct
      841 tgccgatttt tgactcttat ctggaggtcc tctatccaga tgggacaggt gacggtggta
      901 ataatgactc cattgtcctt tacggtcgct tgttggaaac taactttctc tttacaggag
      961 acctggagca aggggagttg gacttgatag aaacctatcc caacctgcct gtcgatgtcc
     1021 tcaaagccgg tcaccacgga tctaaaggtt cttcctatcc tgaattttta gaccatatcg
     1081 aagccaagat tgccttggta tctgctggag aaaataaccg ctacaagcat ccccatcaag
     1141 aaaccttgga ccgctttgac agtcggaata tccaagtcta tcgtaccgac cagcaaggag
     1201 ccatccgctt ccgaggttgg aaggagtgga ggattgaaac ggtgagggag tagattttgg
     1261 tagtaagcta tataattata gtttatttag tctcctaacg tcatttgttg ggaaattttt
     1321 tgttgcgata aaattgacga cgtattcttt gcgtttcatt ctttttactt atataattat
     1381 agtggatttt tttattcggc tcaaaaagga gactatattt taatgaattt acatttttta
     1441 caaaaaaagc accattttgg aatccgtaag ttttccatcg gtgtcgtatc tgttgcctta
     1501 gcaattagct ttagcgttgc tggagggcag gttgcggctg cccaagaggc aacacaagca
     1561 cctgttagta gccagcaaac gagtcagcca gtgacagatg agccaagtca agagcaggaa
     1621 accaatgaag tagctgttca aactccagaa accgttggtt ccatactaaa cgaagctaca
     1681 caggagaacc tagctcaaga aagccagctt gtagaagtag aaccagctat tcagaaggaa
     1741 gtggtttctc aagacatttc agcaccccaa gcagcacttc ctgcagaaga gcagtcaaat
     1801 ccagctggtg atgagaacac tctcccagcc gaaaattttc atcaggttgc tgagccagta
     1861 gaaccaaaat ctattcaaac ggcacaagaa ccagtaggtt caacggacga ggctactcaa
     1921 ccagttcagt caactgaaac agcagcagta gaaggagtcg ttcagcctgt gctacgttca
     1981 gcacgaagag cacgcagtgt ggcagttact gaagtagcaa aactaccatt agatgcccaa
     2041 ggtcagctaa tgacttcagt cagtggagct actgttcata aattccaagt actcaattca
     2101 gatggtagta gccagatagt ggaggcacag gctacagacc agattcagaa aacttcagat
     2161 atttccgata aggtcaacca aattaaacaa gaattgtctg caatcactta tgattcgctt
     2221 tatccgtctt tgaataatta tgagagaatt tatgataaga ctgatatgga tagcattatt
     2281 gctaaggaaa accctggtcg aacctttaca gaggcagaaa aggttgttct acgaaacaaa
     2341 tattacatgg atcagttgga catgcgtgat agctttacac gtgttcaggg agatttagag
     2401 cacatcttaa caggtctttt tgagaaatca aaccaggtcg atattgaaac cataaaaaca
     2461 aataaagaga aggtcttact tggtttgacc tatcttgatc gtcagttttc ttttaagttt
     2521 gggaattatc aagccaagga tctcattctc taccatcctg aagtttttgg tggaactgga
     2581 gatgtgctga ctaatttata cactattggt agtcagaact atcaggattt attattggct
     2641 caaagtgcaa caacctttaa aaataaggtg gctggacagc ttgggcaaac agatgtattt
     2701 agctttgtag aaaaaggatt gtccatcttt gataaggaca agacgaattc tgaatggttg
     2761 aaagaggaat cgaaggcact gattgttgag gcgacgaaca gctatggacc tacaacaact
     2821 ctttatgaaa aattaaaatc tgatactaga ctagctaatc atttattgcc gcttcttagc
     2881 ttgccgagtg agtccgttta tgtgctgtct acctccaaca ctgtatctta tggcttgaca
     2941 gaaacctatc tggggcaagc acctgctaca gcagacttta aacagaaact ttctgactat
     3001 gcctatcacc agcaagaatt tttaaacttc tggtatagga tgacccagag aaagcaagaa
     3061 tttgccaacc atcctcctat tattgtagtt gatactgtgc aaaaatacgg tcaatctgga
     3121 aatgctcggg acttgtattc gccgaaattt ggttccactg ttctgaaagg tgtcagagag
     3181 tttatcgttc cattgaacct ttatgcgaat tttgtttttg ctggtggcca agctagtgga
     3241 actagcagga tgaataattt tctatataag ttattaacaa atgatggtca tgaagtctat
     3301 actcatgagt tgacccatat gctggataag acgatttggc taaatggcta tggtcgtcga
     3361 tcagggcagt tacaggaagt atttgcaagg ggattattcg aatctagaaa tatgtctgct
     3421 gccacagtgt ctgacccgat tttcaacctc aacactgcct atactatttc aggtgctaga
     3481 acccaaaata gccatccaaa tcgattccaa accactgagg atatgaagac ctatatgcag
     3541 ggaatccttg atgtgattta cactttggat tacgctgagg ctgaggctat tttaaaacaa
     3601 acggctgatg atagagcggt tttactcaat caaattcgcc ttgtacctga cactactaat
     3661 actaggggag gaatgactga agaggttctt cctattgacg caagtacagc agctaatttg
     3721 caaactgtcg ctgattttgt agatcaaggt atgatttcgg gacgctataa actgaatggc
     3781 atggcaacta gaggagtagc taaaaccaat caataccata ctattcctct ctttgaaccg
     3841 atttatgctg cccttcaaaa tgatacgggt agcggtggtg atattagctt taagagaaat
     3901 gcctatgaaa ttttaggtga atacggctat gaaaatggta tggtagctta cttgtcagat
     3961 caacatgcca atgatcaggc ggccctgaat gccattatgc cagaatacaa aggtaattta
     4021 gcaaccttca agaaggctat gtttgaccgt cggattgcca aagtatccca actgaaatcc
     4081 actagtgaag ccagtgattt tgctgctatt caaagtgaaa tggataaggc tattgccaaa
     4141 gacctacaac aattaaaagc taatgcaaat aataatgttc ttttgtcaac cgggataaat
     4201 gctgtcagag atttgaaaaa taaaatcttc caggcttatt tgcaggctac aaatgacttc
     4261 cgtacaagca tttacagcga gcctaaggcg cgtgagcttt acgtcaccaa tggttctgaa
     4321 acttcaaccg agggtcaggg caccgaaacc agcccttacc aaagtctatc ctatgctctt
     4381 gctcaagcca aagacggtga taccatcaag ctagtgagtg atattttgca tcgtgatgga
     4441 cagaattttg tgacaaattt tgttattgac aaggcagtga cgattgatgg tcgtggaaat
     4501 aaattaaatc tccgtggtct caatttgctg acgaaaaaag atgtgaacct gaccaatctc
     4561 aagcttgaga tgattccaga tggtggtcaa caaccgaaga tttatgcgga tggtaaccat
     4621 ctgacctttg ataatgtgtc aacgaccatc agtcaggctc agacagatct tcgtcctata
     4681 ttgattgcag gctctctgac agacaatcca tcaggtagtc atggtcaaat caccattact
     4741 aacggaagtt cagatacacg atttaacaca atctacgcag gaaatgtaga ttcagcaagc
     4801 agcattcctg tgacgatttc aatcctgtca gattttgtca atgccgataa tggaattatt
     4861 ctttcgggtg tcaatgggga ttttgttgag ggcccagttg cagttatttc aaaatctagc
     4921 agtttgaaat ccatagatgg aagtgcgagt ttagacaata ctgttaccat tgatactgcg
     4981 cgtgtttatg gtcttaactt acaaaatatc caaacgctcg aattggtcaa taaggcggat
     5041 gttagtttag caagtcaggt atctgatatc gcaactggtg taaaacttgc atctggtacg
     5101 cagttaacca ttgacaataa tcctgtaact cttggagagc tatctggtca aggaaaggtt
     5161 attatcccag ccacagctag ccttgtggta acaggagata ttcaagataa tgttcaagtt
     5221 cttgtcagag ggtttgaaca ggcgctggtt cagaatgtaa acaaggatta tgtcattgca
     5281 gaaggttgga catctcctaa tgccagtata gctttggaaa acggatataa tcgttttgcc
     5341 ttggttcagg atggagcagc ctatcgtttg atagagccga ctcagacacc gcaagatatc
     5401 caagtccaac ttcgctttaa agacggtgaa agggttgtta aagaggaaag cctgacctta
     5461 ccagccgggt cttcagtgac agatttggtg gctcgtttgc ctcaaccagc tcgaggtcat
     5521 tatgcgattt cctcaagttt cgaccagact caattaaata atctccaaac ttctaagaca
     5581 gttgagattc cattggaatt ggtcaaagta ttcgataaaa ctgctattat ggctcttgaa
     5641 ttggtggctt caccgaccaa gcttgtctat cgcccagcgg acacagtaga tttgtcaggt
     5701 cttcaagtga gactggtgga caatcaaggt ctgtccaaaa ccattactcc agaccaattt
     5761 ggtgagtacg gtgtggaatt ggtgcctgtt accctgacac cacaagtgac cagtctgcaa
     5821 ctccgtaagg acactcatga gttggctatt ccaattcagg ttaccccatg gaaagcagat
     5881 gtctatgcag ttactgttgg ggagaagcat gtttatgaga cggatgataa tctgactgcg
     5941 gtagaaactg ctgttttggc caaggttcag gttgatgccc aggcaggtcc tgttgaaaag
     6001 agctttgtaa accctcttcc aactactctt ggcgaacaca gtgtaccagt ccttgtcaga
     6061 tttgatgatg gtagtcagaa gcgagtattt gttcaggtag ttgttcaaca cacagccaaa
     6121 ggcgaaggtg ttacacatga attgccacaa ggtgttcttc caccgctaga aacagctaaa
     6181 ggcgaaggtg ttacacatga attgccgcaa ggtgtccttc caccgttaga aacagctaaa
     6241 ggcgaaggtg ttacacatga attgccgcaa ggtgttcttc caccgttaga aacagctaaa
     6301 ggcgaaggtg ttacacatga attgccgcaa ggtgtccttc caccgctcgt aacagctaaa
     6361 ggcgaaggtg ttacacatga cttgccacaa ggtgttcttc caccgctcgt aacagctaaa
     6421 ggcgaaggtg tcacacatga attaccacaa ggtgttcttc caccgttaga aacagctaaa
     6481 ggggaatctt tactctttga tagaccgata cttacggttg atgagatgtt gagacgattg
     6541 actacagggc agagtatgtc gaaaggaatt ctggtagatt ttgagaatag ttcaaatcca
     6601 gctgcaaaag aaaaggtagc cccagtattt tcagtaagat ctagaatagg aacgaatgga
     6661 cagttacctg ctacgggtga taaaaataat aatctagcct tgcttggcat catgtccgca
     6721 atctgtcaaa tcatattttt gaaggttcgt agaaggtctg atgtagctat ttttacagat
     6781 aggaagaaca agtaggactt gttgcgaaat atgattttaa agtgaaatct agttttgact
     6841 aggtttcact tttttgtcgt atcgtaccag gtacttttca ttatgatact catttaaaat
     6901 caaaattagc tatctactaa tcaaattgaa tatagagaat ttcaattttg aagttttcga
     6961 aaagagaatg gctagtcaaa atctatgatt tccaatctga acttagatat tgaaatttta
     7021 cacatagaaa ttgatttcaa tatgctatt
//
LOCUS       DBNFCX010000102         7011 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.102, whole genome shotgun sequence.
ACCESSION   DBNFCX010000102 DBNFCX010000000
VERSION     DBNFCX010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 7011)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7011)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7011
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.102"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            254..1297
                     /gene="pheS"
                     /locus_tag="AC1PJC_001923"
     CDS             254..1297
                     /gene="pheS"
                     /locus_tag="AC1PJC_001923"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HIP6620897.1"
                     /translation="MSNIEQQLAELSQTTLEKLKEIQHQGEKELQDLRVAVLGKKGSL
                     TDLLKGLKDLSNDMKPIVGKQVNEVRDVLTAAFEETAQKVAAAKIQQQLASETIDVTL
                     PGRQVKVGKRHVLTQTSEEIEDIFLGMGFQIVDGFEVEKDYYNFERMNLPKDHPARDM
                     QDTFYITEEILMRTHTSPVQARTMDQHDFSKGALKMISPGRVFRRDTDDATHSHQFHQ
                     IEGLVVGENVSMGDLKGTLEMIIKKMFGEERQIRLRPSYFPFTEPSVEVDVSCFKCGG
                     DGCNVCKKTGWIEILGAGMVHPQVLEMSGIDSTKYSGFAFGLGQERIAMLRYGINDIR
                     GFYQGDVRFSEQF"
     gene            1842..2363
                     /locus_tag="AC1PJC_001924"
     CDS             1842..2363
                     /locus_tag="AC1PJC_001924"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIP6620898.1"
                     /translation="MQIDSIRLEEVSVLQELAKQTFAETFAHDNDPKELEVFFEESYS
                     LGVLTSELSDPNCQHYFLRIDHQIAGYLKLNQGSAQTEQELENAFEIQRIYLLQAYQG
                     RGLGKVLFEFALEKAEQSSCDWVWLGVWEHNYKAQKFYSKYGFEKFGQHEFAVGDKID
                     VDWLLKRPLHQKG"
     gene            2365..4764
                     /gene="pheT"
                     /locus_tag="AC1PJC_001925"
     CDS             2365..4764
                     /gene="pheT"
                     /locus_tag="AC1PJC_001925"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002897790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HIP6620899.1"
                     /translation="MLVSYKWLKELVDFDATSHDLSEKMSTTGIEVEGVEQKSAGLSK
                     LVVGEVMSAEPIPDTHLNICQVNVGDEITQIVCGAPNVKAGIKVIVALPGVRIAGNYK
                     IKKGKIRGVESLGMLCSLSEIGVSDSVVPKVYADGIYHLPEDAVVGEPIFSYLDLDDE
                     IIELSITPNRADALSMRGVAHEVAAIFDSKVNFKPVVLEESDKKASDVIEVAIESDKV
                     TAYTARVIENVTIAPSPQWLQNLLMNAGIRPLNNVVDITNYILLYFGQPMHAFDFDKF
                     DGKKIVARQAKEGENLVTLDGEERDLITDDIVISVGDKAVALGGVMGGANTEIDNSSK
                     TVVLEAALFDGKSIRKTSGRLNLRSESSSRFEKGINVATLTEAMDTAAAMIAELAGGQ
                     VLSGIVSAGSVDTSDVPVTATIDYVNRSLGTNLDYAQIADIFRRLGMETTGDASQFTV
                     AVPRRRWDIRIPADLVEEIARIYGYNNLPTTLPKEDGTAGELTLTQNIRRQARSLAEG
                     AGLTEIISYALTTPEKAVEFAARPTTVTELMWPMTVDRSALRQNMVSGMLDTVAYNVA
                     RKNKNLALYEIGKIFEQSGNPKEDLPQEINKFALVLTGLVAEKDFQTPAVPVDFFHAK
                     GILEAIFDHYKLAVDFVATSEIAALHPGRTAEIHLNGAVIGFVGQVHPQTAKDYGIPE
                     TYVAEINLDAIEEALQPAQPFTEISKFPAVSRDIALLLSSDVKHQDVLDAIAGAGVKR
                     LTKVTLFDVYAGNNIEAGKKSMAYNLTFQNPADSLTDEEVAKYMEKISKALVELGAEI
                     R"
     gene            4819..5085
                     /locus_tag="AC1PJC_001926"
     CDS             4819..5085
                     /locus_tag="AC1PJC_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2087 domain-containing protein"
                     /protein_id="HIP6620900.1"
                     /translation="MNTQDIQEKFFRDGKLLVIPKKLKSKQVLFAYLQEELAKKGSTF
                     TEKEVNAFLAEIYDDYAILRRYLVDYGYLSRDQYGLKYRIEEKR"
     gene            complement(5106..5408)
                     /locus_tag="AC1PJC_001927"
     CDS             complement(5106..5408)
                     /locus_tag="AC1PJC_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620901.1"
                     /translation="MYEFVLEYGSFPVKLIDGFVNNRSEIPDFLKEDEEMIARLNEIN
                     ELFHQLFLTIECKFDYIGKQFPDKIEQLRELYHPLADDLLAKYGNQIELKIEPFIL"
     gene            5597..6340
                     /locus_tag="AC1PJC_001928"
     CDS             5597..6340
                     /locus_tag="AC1PJC_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate polymerase domain-containing
                     protein"
                     /protein_id="HIP6620902.1"
                     /translation="MKTRIVQKQFKRKETKYIVDKKTFELLEKELRQYMMADEFATST
                     ITNIYFDNEDFDMIQDSLAKKNGREKIRMRVYDATPSESSQAFLEIKKKENKIGYKYR
                     LTSNPVSVTNYIENGVIDSTIKDDKVTSELEMLRERYGTIKPKMYIYYDRVSYKGIED
                     KKVRLTIDKNLLYRDYDVDAMEGKFGKNLLDPTKVIMEVKVPEERPDWLVALLEKYQI
                     EKQSFSKYGNAYKLAHNITGEEVSKHAAV"
     gene            6327..7004
                     /locus_tag="AC1PJC_001929"
     CDS             6327..7004
                     /locus_tag="AC1PJC_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4956 domain-containing protein"
                     /protein_id="HIP6620903.1"
                     /translation="MQLFNSIFSTANSNITLAQMSMVFGVSLSMGVLLAAVYKYKSNY
                     TKEFVITLSLMPALIAVIIALVNGNLGAGVAVAGTFSLIKFRSAAGSSKEMLAVLLAM
                     AIGLATGMGFLGLAVFMTVILSACILIFENISFAQVNQNRRHLLVTVPMDFDYDQFFE
                     NQFGKSCKQADLISLKYKKKKEALILEYQVLLDKKITDKRLVDTVLSAGPLDVVLNKQ
                     MPKKKYL"
BASE COUNT         2034 a         1393 c         1651 g         1933 t
ORIGIN      
        1 gggaagattt cttgccaaac tttcttattt ttgatagaat atccttaatt gaatagaagt
       61 ctgtgagact agtacaccta tggaaactgc ccagggagtt gagccgtgac tgcaagctca
      121 atcagtgaaa gttggtcgaa ttcactcaca caaagactta gaactaaggt ctgcctagca
      181 gatgaaaacg gatggtaccg cgtgacaacg ctccgatacg agtggtgtca tgcgtttttt
      241 tattggagga attatgtcaa acattgaaca acagttggct gaattaagcc aaactacact
      301 tgaaaagtta aaagaaattc agcaccaagg agaaaaagaa ctacaagacc tgcgtgttgc
      361 ggttttgggt aaaaaagggt ccttgactga cttgttgaaa ggcttgaaag acctatctaa
      421 cgacatgaaa ccaatcgttg gtaagcaggt caatgaagta cgtgatgtgc tgacagctgc
      481 ctttgaagaa acagctcaga aggttgcagc agccaaaatt caacagcaat tagcttcaga
      541 aaccattgat gtaaccttgc caggtcgcca ggtcaaggtc ggaaaacgcc atgtcctgac
      601 tcaaacttct gaagaaatag aagatatttt cttgggcatg ggcttccaaa tcgttgacgg
      661 atttgaagtg gaaaaagatt actacaactt tgagcgcatg aatttgccaa aagaccaccc
      721 agcacgtgat atgcaggata ccttctacat cacagaagaa atccttatgc ggacccatac
      781 gtcgcctgtt caggcacgga ccatggacca gcatgatttc tcaaaaggtg ccttgaagat
      841 gatttcgcca ggacgtgttt tccgtcgtga tacggacgat gcgacccaca gccaccagtt
      901 ccaccagatt gaaggcttgg ttgtcggtga aaatgtatcc atgggtgatc tcaaaggtac
      961 gcttgaaatg atcattaaga aaatgtttgg tgaagagcgt cagattcgcc tccgtccatc
     1021 ttacttccca ttcactgagc catctgttga ggtggatgtt tcttgcttca agtgcggtgg
     1081 tgacggctgt aacgtatgta agaaaacagg ctggattgaa atcctcggtg ccggcatggt
     1141 ccacccacaa gtattggaaa tgagcggcat tgactcaacc aagtactctg gctttgcctt
     1201 cggtctcggt caggaacgca ttgctatgct ccgctacggt atcaacgata ttcgtggatt
     1261 ctatcaaggc gatgtacgat tctcggagca gttttaacgt agcactactt aaggctgaca
     1321 aagtcagctc ttaagtagac ggaaatcgct attgagcgac tttcctagct accttactag
     1381 gctttcaagc aaaaaatatc gtttcgcttg aaataccgtc gtaatttagg aagtttgtta
     1441 ggtgttcagt acgagaaacg gtagtcgcta tgacgaactg tctaatcgtc tcactagttc
     1501 taatgttgaa aaaatgtcgt tttcaacatt agaacgtcgt aatctcgcac tatttaaggt
     1561 gtgggaatcg ctgctctgcg actttcctag ctgccttact aggctttcaa tcgaaaaata
     1621 tcgttttact tgaaatccgt cgtaatctga taaaggttag tagattgttg tttgagagaa
     1681 atggtagcca ctatggcggt ctacctactc acctcactag gtttagagtt gaaaaagtat
     1741 cgttttcaac cttagaacgt cgtaaccacg gacgagtaaa gtgaggggga aatcgctatt
     1801 ctgcgacttt cctagcccag ttagaaatga gaggcaatga gatgcagata gattcgatac
     1861 gtttggaaga ggtttctgtt ttgcaggagc tggctaaaca gacttttgcc gagaccttcg
     1921 ctcacgataa tgacccgaag gaactggagg tattctttga ggagtcttat tccttggggg
     1981 tcttgactag tgagttatcg gatcccaact gccagcacta ttttctaaga atagatcatc
     2041 aaatagctgg ttatctcaag ctcaaccaag gttctgccca gacggagcag gagctggaaa
     2101 acgcttttga aatccagcgt atctatctct tgcaggccta tcaaggtcgc ggtcttggga
     2161 aggtcttgtt tgagtttgct ttggaaaaag cagagcagtc tagttgtgat tgggtctggc
     2221 tgggagtttg ggaacataat tacaaggctc agaaattcta ttccaaatac ggatttgaaa
     2281 aatttggcca gcatgaattt gcggtcggtg ataagattga tgtggattgg ctattaaaac
     2341 ggcctttgca ccagaaagga taatatgtta gtaagttaca aatggttaaa agaactggtt
     2401 gactttgatg cgacaagtca tgacttgtct gaaaaaatgt caacaacagg aattgaagta
     2461 gaaggggttg agcaaaagag tgctggcctg tctaagttgg ttgtcggtga ggttatgtct
     2521 gctgagccaa ttccagatac tcacctcaat atttgtcagg tcaatgtggg tgacgaaatc
     2581 acgcaaatcg tttgcggtgc tccaaatgtg aaagctggta tcaaggtaat cgttgctctg
     2641 ccaggagttc gtatcgctgg caactacaag atcaagaaag gcaaaatccg cggggttgag
     2701 tccttgggta tgctctgctc gttgagcgaa atcggcgtgt ccgactcagt tgtgccaaaa
     2761 gtctatgcgg acggcatcta ccacctgcca gaagatgcag tggtgggtga gccaatcttt
     2821 tcatacctgg accttgacga cgagattatt gagctgtcca tcacaccaaa ccgtgctgac
     2881 gccctttcca tgcgtggcgt ggctcatgaa gtggctgcta tctttgacag caaggtcaac
     2941 ttcaagccag tggtcttgga ggaaagtgac aagaaggcca gcgatgtgat tgaagtggcc
     3001 attgagtcag acaaggtgac tgcctacacg gctcgtgtca ttgaaaatgt gaccatcgca
     3061 ccaagtccac agtggttgca aaacctgctc atgaacgcag gtattcgccc gctcaacaat
     3121 gtggtggaca tcaccaacta catcttgctc tacttcggtc agccaatgca tgcctttgac
     3181 tttgacaagt ttgatggcaa gaaaatcgtg gctcgtcagg caaaagaggg tgagaacttg
     3241 gtaactcttg acggcgaaga acgtgacttg attaccgatg acatcgtcat ttccgttggg
     3301 gacaaggcag ttgccctcgg tggtgtcatg ggtggtgcta atacagagat tgacaatagc
     3361 tctaagaccg tcgtgctgga agctgcactt tttgatggca agtctatccg caagacctca
     3421 ggtcgcctca accttcgctc tgagtcttct tctcgatttg aaaagggcat caacgtagcg
     3481 accttgacgg aggctatgga tacagcggct gctatgattg cggaactggc tggcggtcag
     3541 gtcttgtctg gcatcgtttc tgcgggcagc gtggatactt cggatgtccc agtcacagcg
     3601 accattgatt acgtcaaccg ctcgctcggg accaatctgg actatgccca aatcgcagat
     3661 attttccgtc gtttaggtat ggaaacaact ggcgatgcaa gtcagtttac agtagcagta
     3721 ccgcgtcgtc gttgggacat tcgcattcca gcagacttgg tagaggaaat cgctcgtatc
     3781 tatggttaca ataatctgcc gaccactctt ccgaaagagg acggaacagc aggtgagttg
     3841 accctgaccc agaacatccg tcgtcaagca cgtagccttg cagaaggtgc aggtctgaca
     3901 gaaatcattt cctatgcctt gacaacacct gagaaggctg tggagtttgc ggctcgtcca
     3961 accacagtca ccgaactcat gtggccgatg acagttgacc gctctgccct ccgtcagaac
     4021 atggtgtctg gtatgttaga cacagtggcc tacaatgtgg ctcgtaagaa caagaacttg
     4081 gctctttacg aaatcggtaa aatctttgaa cagtctggga atccaaaaga ggacctgcca
     4141 caagaaatca ataagtttgc ccttgtcttg actggtttgg tagctgagaa agacttccag
     4201 acaccagctg taccagttga tttcttccat gccaaaggta tcttggaagc tatctttgat
     4261 cattacaagt tggcagttga ctttgtagcc acaagtgaga ttgctgctct gcacccaggt
     4321 cgtacagctg aaatccattt gaatggggcg gttatcggct ttgtcggtca ggtacatcct
     4381 caaacggcca aggactacgg tattcctgaa acctatgtgg ctgaaatcaa tctggatgcg
     4441 attgaagaag ctcttcagcc tgctcagcca tttaccgaaa tctctaaatt cccagcggtt
     4501 agccgtgata ttgccctgct tttgagcagt gatgtcaagc atcaggatgt cttggatgcc
     4561 attgctggtg cgggcgtgaa acgcttgacc aaggtgaccc tctttgatgt ctatgcgggc
     4621 aataatattg aggctggtaa gaagtctatg gcttataacc tgaccttcca gaatcctgcg
     4681 gatagcctga cggatgaaga agtagctaag tacatggaga aaattagtaa ggctttggtt
     4741 gagcttggag ctgaaatccg ttaacatgta aatcttgtga aatcctagtc agcgggctag
     4801 gattttttgg agggaagtat gaacactcaa gatattcaag aaaaattttt ccgagatggg
     4861 aagttgcttg tcattcctaa aaaattaaaa agtaagcagg tcttgtttgc ctatttacaa
     4921 gaagagttgg ctaagaaagg ctcgaccttc acagaaaaag aagtcaatgc ctttctagct
     4981 gagatttatg atgactatgc tatattgaga cgctacttgg tggattatgg ttacctatcg
     5041 cgtgaccagt atggtttgaa atacagaata gaagaaaaga gatgattgct gtcatctctt
     5101 ttgtcttaca aaataaaggg ttcaatcttc aactctatct ggttgccata cttggctagt
     5161 aaatcgtctg ccaggggatg atagagttct cgtagttgtt cgatcttgtc aggaaattgt
     5221 ttgccgatat agtcaaactt gcattcgatg gttaagaaaa gttggtggaa gagttcgttg
     5281 atctcgttca agcgggcaat catttcttcg tcttctttga gaaaatcagg aatttctgag
     5341 cgattgttga caaaaccgtc aatgagtttt acagggaatg agccgtattc taagacaaat
     5401 tcgtacatag ttttctcctt tgttatcatt atgctaattg taacacagat cgaaatatga
     5461 caaaagaatt tcaactttat tgcagtttaa gttttgttta attttatttt cagtttcatt
     5521 taaagctagg tcggtaaact atatcttgta aacaagacag ggacctgtca aaatttagga
     5581 tagaagaggc acaataatga aaacaagaat tgtacaaaag cagtttaagc gtaaagagac
     5641 taaatatatc gttgataaaa aaacttttga acttttagaa aaggaacttc gtcagtacat
     5701 gatggcagat gagtttgcga catcaacgat taccaatatc tactttgata atgaagattt
     5761 tgatatgatt caagattcac ttgccaaaaa gaatggacgt gagaaaattc ggatgcgtgt
     5821 ctatgatgcg acaccatctg aatcaagtca agcttttctt gaaatcaaga aaaaagaaaa
     5881 taaaattggc tataaatacc gtttaacctc aaaccctgtt tctgtaacaa actatatcga
     5941 aaatggagtg attgattcca caatcaagga tgataaggta acctcagaac tcgaaatgtt
     6001 gagagaacgc tatggtacta ttaagccgaa gatgtatatc tactacgatc gcgtatccta
     6061 taaaggaatc gaagacaaaa aagttcgtct cacaatcgat aagaacttac tttatcgaga
     6121 ctacgatgtg gatgcaatgg aaggtaaatt tggtaagaac ctattagacc caaccaaagt
     6181 aatcatggaa gtaaaagttc cagaagaacg accagactgg ttggtagccc tgcttgaaaa
     6241 ataccaaatc gaaaagcaat cattttcaaa atatggcaat gcctataagc ttgcccacaa
     6301 catcactgga gaggaagtaa gcaaacatgc agctgtttaa tagtatcttt tcaacggcca
     6361 atagcaatat taccttagcg cagatgtcca tggtttttgg agttagtcta tccatggggg
     6421 tactcttagc ggctgtttat aaatataaat ctaattatac aaaggaattt gtcatcacac
     6481 taagtttaat gccagctttg attgctgtta tcattgcatt agttaatggt aacttaggag
     6541 cgggagttgc ggtagcaggg actttcagtc ttattaaatt ccgctcagca gcaggttctt
     6601 caaaggaaat gcttgcagtc ctcttagcga tggcaatcgg tctagcgaca gggatgggct
     6661 tcctaggttt ggctgtcttt atgacggtca tcctatctgc ttgtatcttg atttttgaaa
     6721 atatcagctt tgcccaagtc aatcaaaatc gtcgtcatct cttggtaaca gtaccaatgg
     6781 actttgacta tgatcaattt tttgaaaatc aatttggtaa atcttgcaag caagccgact
     6841 tgatttccct caaatacaag aagaaaaaag aagcattgat tttagaatat caagttctcc
     6901 tcgataaaaa aattacagat aaacgcttgg tagatacggt attatcagcc ggtcctttgg
     6961 atgtcgtatt aaacaagcaa atgccgaaga agaagtattt gtaatatcaa a
//
LOCUS       DBNFCX010000103         6924 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.103, whole genome shotgun sequence.
ACCESSION   DBNFCX010000103 DBNFCX010000000
VERSION     DBNFCX010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 6924)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6924)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6924
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.103"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(4..177)
                     /locus_tag="AC1PJC_001930"
     CDS             complement(4..177)
                     /locus_tag="AC1PJC_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620904.1"
                     /translation="MKIILTIVYSLGVVWNTLYIAYNVGKLPLLNLLWPAVILVACAI
                     NLYFLWTRKQESE"
     gene            complement(211..333)
                     /locus_tag="AC1PJC_001931"
     CDS             complement(211..333)
                     /locus_tag="AC1PJC_001931"
                     /inference="COORDINATES: protein motif:HMM:NF022896.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3021 family protein"
                     /protein_id="HIP6620905.1"
                     /translation="MSDKELIYLFWFIFTLIYALLFFLNYRKMERQIKDINGRL"
     gene            complement(430..2970)
                     /gene="mutS"
                     /locus_tag="AC1PJC_001932"
     CDS             complement(430..2970)
                     /gene="mutS"
                     /locus_tag="AC1PJC_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002894103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HIP6620906.1"
                     /translation="MATEKISPGMQQYLDIKANYPDAFLLFRMGDFYELFYEDAVEAA
                     QILELSLTSRNKNAENPIPMAGVPYHAAQQYIDTLVELGHKVAIAEQMEDPKQAVGVV
                     KREVVQVITPGTVTDSSKMGADSNYLVAIDRQGVQFALSYMDVSTGQFFVTSLDDFTS
                     LCGEIRNLRARELVIGYALSEEEEQVFSNQMNLLLSFEDEVTEDVQLIDNSLTDLEKA
                     AAGKLLSYLHRTQMRDLSHLQKVVHYEIKDYLQMDYATKSSLDLLENGRTGKKHGSLY
                     WLLDETKTAMGMRLLRTWIDRPLIDLKRIENRQAVVQVFLDYFFERSDLVEALKGVYD
                     IERLASRVSFGKTMPKDLLQLSQTLGNIPAIKNILLQINEPALGNLVAGLDPIPELHA
                     LISSAIDPEAQGTITDGNIIRTGFDETLDQYRLVMREGAGWIAEIEAKEREASGINNL
                     KIDYNKKDGYYFHVTNSNLGNVPDHFFRKATLKNSERYGTEELAKIEGQMLEARDKSA
                     NLEYEIFMRIRQEVEKYIGRLQKLARTIATIDVLQAFAVVAEQQHLVCPRFTDQRELT
                     IDRGRHAVVEKVMGKQTYIPNSIHLDTDTHMQLITGPNMSGKSTYMRQLAVIVIMAQM
                     GSYVPADQAELPIFDAIFTRIGAADDLVSGQSTFMVEMMEANKAVRLATDRSLILFDE
                     LGRGTATYDGMALAQSIIEYIHDKIGAKTLFATHYHELTDLSQTLEHLENVHVSTLEK
                     DGQVTFLHKIAQGPADKSYGIHVAKIAGMPEELLERADRILQTLENQAPTAPANPAPS
                     VVEEPSGQIDLFADTPSHPVLDELEKLDIYNMTPMEVMMAVAELKKKL"
     gene            complement(2985..3425)
                     /gene="argR"
                     /locus_tag="AC1PJC_001933"
     CDS             complement(2985..3425)
                     /gene="argR"
                     /locus_tag="AC1PJC_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006525 - arginine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine repressor"
                     /protein_id="HIP6620907.1"
                     /translation="MNKAGRHDLIKAMIRQEKIGRQTDIQQGLEARGVVVTQTTLSRD
                     LRELGVIKIHENGRSFYSLAIEEERVNFIQLLAQYAYKVDRASFILVLHSELGEAALM
                     ANIIDAEKPETILGTLAGANTLLVICRDDVAAQQVEAEINYYLN"
     gene            3532..5220
                     /gene="argS"
                     /locus_tag="AC1PJC_001934"
     CDS             3532..5220
                     /gene="argS"
                     /locus_tag="AC1PJC_001934"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005591476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HIP6620908.1"
                     /translation="MNQKQVIAERLAAILPSLEVEAIYNLLEKPKSSEMGDIAFPAFS
                     LAKVERKAPQAIAADIVEKLDTTGFEKVVATGPYVNFFLDKAAISHQVLTDVITEKDQ
                     YGKLNIGQGRNVTIDMSSPNIAKPFSVGHLRSTVIGDALANIHEKLGYKPIRINHLGD
                     WGKQFGMLIVAYKLWGDKAAVEADPISELLKLYVRINAEAEEKPELDDEARQWFKKLE
                     DGDPEAHELWQWFRDESLVEFNRIYDKLDVTFDSYNGEAFYNDKMDEGIQILEEKGLL
                     QESKGARIVDLESYNLPPALIMKTDGATLYITRDMATAMYRKRTYDFVKSIYVVGQEQ
                     INHFKQLKAVLKEMDFDWSDDMTHITFGLVTKDKKKLSTRKGNIILLEPTLDEAISRA
                     LTQIEAKNPDLENKEEVAHAVGVGAVKFYDLKTDRDNGYDFDLEAMVSFEGETGPYVQ
                     YAYARIQSILRKANFVPSAENDYKLADAESWDIIKHIQNFSNVVERAGDKFDPSLIAK
                     YAINLAQAFNKYYAHTRILDESPERDSRLALAYATGLVLKEALRLLGVKAPEKM"
     gene            5399..6313
                     /locus_tag="AC1PJC_001935"
     CDS             5399..6313
                     /locus_tag="AC1PJC_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HIP6620909.1"
                     /translation="MKKFLRRKGIACQLLAAIFIVGINLQSPPSASANARGDDYPYTA
                     VDAVDPWRLYTRQCTSFVAFRLSTVNGFTLPPAYGDANVWGHRAKQEGYQVNMTPAVG
                     AVAWWETPMHVAWVSAVNGDTVEIEEYNYGVRYTYGRRVIPKNAISGYIHFKDLGAGT
                     TNSQPAVAPSGTYTFNSQLAIKSQASLSSPTLDYYYAGESVRYDKVLEADGQRWISYI
                     SYSGARRYIAIQPTITQSTNNSLPASGSYTIQSYSSVRNNPSLSSPEITFYGAGSVVR
                     YDKVITAEGRTWISYISYSGARRYIAIS"
     gene            complement(6367..6891)
                     /locus_tag="AC1PJC_001936"
     CDS             complement(6367..6891)
                     /locus_tag="AC1PJC_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIP6620910.1"
                     /translation="MKRPIHLYIFVVLSSIASVLRGFNIFFAKYDEAAVRQLLQNFNV
                     EGIDEAYFTYMRESINFQTNLVNKAFAVVLLLAVIATIVLLFLKKNDQASYTYLGYLF
                     VTLLFSTYAFIGEKGLGQIYTDSVMRQSVEAQAMMNYIIRVVLFAIYFGVTIFFHLRK
                     PKEKPSTAINSTDI"
BASE COUNT         2025 a         1735 c         1366 g         1798 t
ORIGIN      
        1 agcctattct gactcttgtt ttctagtcca taaaaagtac aggttaatag cacaggccac
       61 taaaatcaca gcaggccaaa gcaaatttaa caaaggaagt ttaccgacat tgtaggcaat
      121 atagagagta ttccacacta cccccaagct atagacaatc gtcaaaataa ttttcataag
      181 acactccaat taaatgatag tgctattata ctacaaacga ccattgatgt ccttaatctg
      241 ccgttccatt ttccgatagt ttaggaaaaa tagcaaagcg tatatcaagg taaatataaa
      301 ccagaagagg tagataagtt ccttgtccga caatagcaga ggttatgaga gaaataatgg
      361 ttccgagaat aacacctaaa ctgactaaac ggcaaaaaag ccagaacagc tgtcctgact
      421 ttcattgtct tataattttt tcttcaactc cgccactgcc atcatgactt ccataggggt
      481 catattgtag atatctagtt tttccagttc atcaagtact gggtgagaag gcgtgtctgc
      541 gaagaggtcg atttgaccag acggctcttc cactactgac ggagctgggt tagctggtgc
      601 agtaggggct tggttttcaa gcgtctgcaa aatcctatcc gctcgctcca ataactcctc
      661 tggcattcct gcaatcttag ccacatgaat cccgtaggac ttgtcagctg gaccttgggc
      721 aatcttgtgg aggaaggtga cttggccgtc cttctccaag gtcgatacat ggacattctc
      781 taagtgttcc aaggtctggc taaggtctgt caactcatgg tagtgggtgg caaaaagagt
      841 cttggctcca atcttgtcgt ggatgtactc gatgatagac tgagccagag ccataccgtc
      901 ataggtggcc gttccccgtc ccaactcatc aaagaggatg agcgaccgat ctgtcgccag
      961 acggactgcc ttattggcct ccatcatttc gaccatgaag gtcgattgac cactaaccaa
     1021 gtcgtctgcc gccccaattc gggtgaaaat agcatcgaaa atcggtaatt cagcctgatc
     1081 cgcaggtaca taggaaccca tctgcgccat gatgacgata accgccaact gtcgcatata
     1141 ggtagactta ccactcatgt ttggaccagt aatcagttgc atatgcgtat cggtatccaa
     1201 gtgaatagag ttgggaatgt aggtctgctt gcccatgacc ttctccacca ccgcatgacg
     1261 accacggtca atggtcagtt ctctttgatc tgtaaaacgt ggacaaacca aatgttgctg
     1321 ctccgccaca actgcaaagg cctgcaaaac atcgatggtt gcaatagtcc gagccagctt
     1381 ctgcaagcga ccgatatact tctcaacctc ttggcgaatc cgcatgaaaa tctcatactc
     1441 caaattagca gacttatcac gcgcctccaa catctgccct tcgatcttag ccaactcttc
     1501 cgttccatag cgctccgagt ttttcaaggt cgccttacgg aaaaaatggt ccggcacatt
     1561 acccagattg gaattggtca catggaaata gtaaccgtct tttttgttgt aatcaatctt
     1621 aagattgttg ataccagacg cttcacgctc cttggcctca atctccgcaa tccaacccgc
     1681 tccctcacgc atgaccagac gatactgatc cagcgtttcg tcaaagcctg tacggatgat
     1741 gttcccatct gtgatagtcc cttgggcttc tgggtcaata gcagagctga tcagagcatg
     1801 cagttctggg attgggtcca atccagccac cagattgcct agagcaggct cattgatttg
     1861 tagcaagata ttcttgattg ctgggatatt tcccagagtc tgggagagct gcaagagatc
     1921 cttgggcatg gtttttccaa aagacacccg acttgccaaa cgttcgatgt catagacacc
     1981 ttttaaagcc tcgaccaagt cactccgttc aaagaagtaa tccagaaaaa cctgaacgac
     2041 agcctgacga ttctcaatcc gcttaagatc aatcaaggga cgatcaatcc atgtccgcaa
     2101 tagtcgcata cccatggctg tcttggtttc gtctagcaac cagtacaaac taccatgctt
     2161 cttgcctgtc cgaccgtttt caagcaggtc cagactggac ttggttgcat agtccatttg
     2221 cagatagtcc ttgatttcat agtggaccac cttttgcaag tgactcagat ctcgcatctg
     2281 agtccgatgt aggtagctga ggagtttacc tgccgcagcc ttttccaagt ctgtcaagga
     2341 gttgtcaatc agctggacat cttccgtcac ctcatcctca aaagagagca ggaggttcat
     2401 ctggttcgaa aagacctgct cttcttcctc agataaagcg tagccgatga ctaattcacg
     2461 tgcccgtaaa ttgcggatct caccgcaaag actagtaaaa tcatccaaac tagtcacaaa
     2521 aaactgacct gttgacacat ccatataaga aagtgcgaac tgcactccct gacggtcaat
     2581 cgcaaccaaa tagttactgt ctgctcccat tttggacgag tctgttaccg taccaggagt
     2641 aatgacctgc actacttctc gcttgaccac gccgactgcc tgcttaggat cttccatctg
     2701 ctcggcaatt gcgaccttgt gccctaattc aacaagtgtg tcgatatact gttgtgccgc
     2761 gtgatacggt acccccgcca taggaatcgg attttccgca ttcttattcc gactggtcaa
     2821 ggacaattcc aaaatctgcg ccgcttctac cgcatcttca taaaataatt cataaaagtc
     2881 gcccatgcga aacagcaaaa aagcatctgg atagttggcc ttgatatcca gatactgctg
     2941 catgcctgga gaaatttttt ctgttgccat catctctcct tgttctaatt caaatagtag
     3001 ttaatttccg cttcaacttg ctgagccgct acatcatctc gacaaataac taaaagtgta
     3061 ttagctcccg ccagcgttcc caaaatagtc tctggctttt ctgcatcaat gatattggcc
     3121 atcaaggccg cttctcccag ttctgaatga aggaccaaaa taaaactagc cctatctact
     3181 ttatacgcat attgtgccaa taattggata aaattcacgc gctcttcttc gatagctaag
     3241 gaataaaatg aacgcccatt ttcatgaatt tttatcactc ccaactcacg taaatcacga
     3301 gacaaggttg tctgggttac cactactcct cgagcctcta aaccttgctg aatatccgtt
     3361 tgtcgcccta ttttttcttg acgaatcatg gcctttatta aatcatgtcg tcctgcttta
     3421 ttcatcattt tacctcaaaa tgtatattta tagaaatatt ataacacttt tccccgctat
     3481 tagcctagaa atgtgttaaa atagaatcaa taactttgga ggaaatccta tatgaatcaa
     3541 aaacaagtga ttgcagaaag attggctgcc atccttccaa gtttggaagt ggaagctatc
     3601 tacaatctgc tagaaaaacc aaaatcatca gaaatgggcg atattgcctt cccagccttc
     3661 tcactggcta aagtggaacg caaggctcct caggctatcg cagcggacat cgttgaaaaa
     3721 ctcgatacaa ctggctttga gaaggttgta gctaccggtc cttacgtcaa cttcttcttg
     3781 gacaaggctg cgatttccca ccaagtctta acagatgtta ttactgaaaa agaccaatac
     3841 ggtaaactca acattggtca aggacgcaat gtaaccatcg acatgtctag cccaaacatt
     3901 gctaaaccat tctcagttgg acatttgcgc tcaaccgtta tcggtgatgc ccttgctaac
     3961 atccacgaaa agcttggcta caagccaatc cgcatcaacc acttgggtga ctggggtaaa
     4021 caatttggta tgttgattgt tgcctacaaa ctttggggtg acaaggctgc ggtcgaagca
     4081 gacccaattt cagaactcct caaactctat gtgcgtatca acgctgaagc ggaagaaaag
     4141 cctgagttgg acgacgaagc acgtcaatgg ttcaaaaaat tggaagatgg cgacccagaa
     4201 gcgcatgaat tgtggcaatg gttccgtgat gagagcttgg tcgaattcaa ccgcatctac
     4261 gacaaacttg atgtaacatt cgacagctat aatggcgaag ccttctacaa cgataagatg
     4321 gacgaaggca tccaaatctt agaagaaaaa ggacttcttc aagaatctaa aggtgcgaga
     4381 atcgttgacc ttgaaagcta caatcttcca ccagccctca tcatgaaaac agacggtgca
     4441 acactttaca tcacacgtga catggcaaca gctatgtacc gcaaacgcac ttacgacttt
     4501 gtgaaaagca tctatgtcgt tggtcaggag caaatcaacc acttcaagca actcaaagcc
     4561 gttttgaagg aaatggattt cgactggagc gacgatatga cccacatcac cttcggtctg
     4621 gttaccaagg acaagaaaaa gctctctact cgtaaaggaa atatcatcct actcgagcca
     4681 acacttgacg aagctatttc acgcgccctt actcaaatcg aagctaaaaa ccctgacctt
     4741 gaaaacaagg aagaagtggc acacgcagtt ggtgtcggcg ctgtgaagtt ctacgacctc
     4801 aaaaccgacc gtgacaacgg ctacgacttc gacttggaag ctatggtttc cttcgagggt
     4861 gaaacaggtc cttatgtaca atacgcatac gcccgcatcc agtctatcct acgcaaagca
     4921 aactttgtac caagcgcaga aaatgactac aaactggctg atgcagaaag ctgggacatc
     4981 atcaagcaca tccaaaactt ctcaaacgtt gttgaacgtg ctggcgacaa atttgaccca
     5041 tccctcattg ctaaatatgc tatcaaccta gcacaagcct tcaacaagta ctacgcacac
     5101 actcgtatct tggatgaaag cccagagcgt gacagccgtc tagcacttgc ctacgcaaca
     5161 ggacttgtcc tcaaagaagc tctacgtctt ctcggcgtaa aagcaccaga aaaaatgtaa
     5221 tcaaagcctt cggccatcag ccgaggcttt tttctaccac gttgcctact ctcgtttccg
     5281 attccttatc acaacaactc cttatcccaa atgaaaatca aaaagattca tttcaattac
     5341 gaatatatag atgggaggta cacgtgatac ctctacatct actacacaag gagaaataat
     5401 gaaaaaattt ttgagaagaa aaggaatcgc ctgtcagctt ctagccgcca tttttattgt
     5461 cggtatcaat ttacaatccc caccttcagc atcagccaat gcaagaggag atgactatcc
     5521 ctacacagca gttgatgcag tcgatccatg gagactctac acacgccagt gcacctcctt
     5581 tgtagccttt cgacttagca cagttaacgg ttttacattg ccacctgcct atggtgatgc
     5641 caatgtttgg ggccatcgtg ccaaacaaga aggttatcaa gttaacatga cacctgctgt
     5701 cggagccgtt gcctggtggg aaactcccat gcatgtcgca tgggtttctg cagtaaatgg
     5761 agataccgta gagattgagg aatacaacta cggtgttcgc tatacctacg gaaggcgagt
     5821 tatccccaaa aatgccatta gcggctacat tcattttaaa gacctcggcg caggaacaac
     5881 caactctcaa cccgccgtag ccccaagcgg cacctatact tttaacagcc aactagccat
     5941 caaatctcaa gctagtctat ctagccctac cctcgattac tattatgctg gcgaaagcgt
     6001 ccgctacgac aaggttcttg aagccgacgg acaacgctgg attagctata tcagctattc
     6061 tggagctcgg cgctatatcg ccatccagcc taccattact caatctacaa acaatagcct
     6121 accagcatca ggtagctaca ccatccagtc ctactctagt gtccgcaaca atccaagtct
     6181 gtccagtcct gaaatcacct tctacggagc tggctcagtc gttcgctatg ataaagttat
     6241 tactgccgaa ggtcgcacat ggattagcta tatcagttac tcaggtgctc gacgctacat
     6301 cgccatctcc taatcacaaa aaagacaata tttaaaagca caatcttttt agactgtgct
     6361 ttttcattaa atatctgtcg aattaatagc tgtgctcggt ttttctttcg gtttacgcag
     6421 atggaagaaa atagttaccc caaaatagat ggcaaatagg acaactcgaa taatataatt
     6481 catcattgcc tgcgcctcga ctgactgacg cataactgaa tccgtataaa tttgccccaa
     6541 ccctttctca ccaataaaag cgtaggtcga aaataggaga gttacaaaaa gataacccag
     6601 gtaggtataa gaagcctgat catttttctt gaggaaaagc agtacaatcg tcgcaatcac
     6661 agcaagtaat aacacaactg caaatgcctt attgacaaga ttcgtctgga aattgataga
     6721 ttctctcatg taggtaaaat atgcctcatc aatcccctca acattaaaat tctgcaacaa
     6781 ttgacgcaca gcagcctcat cgtacttcgc aaaaaatata ttaaagccac gcaatacgct
     6841 tgcaatagat gacagtacaa caaaaatata caaatgaatc ggtcttttca taatagcctc
     6901 cttttttcta tattttatac tcat
//
LOCUS       DBNFCX010000104         6917 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.104, whole genome shotgun sequence.
ACCESSION   DBNFCX010000104 DBNFCX010000000
VERSION     DBNFCX010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 6917)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6917)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6917
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.104"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            25..3306
                     /locus_tag="AC1PJC_001937"
     CDS             25..3306
                     /locus_tag="AC1PJC_001937"
                     /inference="COORDINATES: protein motif:HMM:NF019142.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="G5 domain-containing protein"
                     /protein_id="HIP6620911.1"
                     /translation="MRSKRFQGLVGLALIASLLNPLPWFNNVMLIGSTVVNANDLPPG
                     ETPPGEDEELPDAEQLALIKKISGYLSEIEASLADGDKDTADYLFTESDAMGGYATSI
                     AAVSNVKNSAERAKLQARIEAIRAQLSGTVQPPSPVITTEEVTETKEEPYVTIRVKDP
                     NLEEGKEEVATPGKAGVRTIVYTVTKTDGVETGRVVKSDEVTTPVINEVIRVGTKKTV
                     VSVITLEEETETKAVPYETIRENDPTLEEGKEVVSVAGKAGVRTIVYTVTKTDGVETS
                     RVVKSDSITTPAVNEVIKVGTKKAPVITTEEVTETKAVPYETVRENDPTLEEGKEVVS
                     VAGKAGVRTIVYTVTKTDGVETSRVVKSDSITTPAVNEVIKVGTKKAPVITTEEVTET
                     KAVPYETVRENDPTLEEGKEVVSVAGKAGVRTIVYTVTKTDGVETSRVVKSDSVTTPA
                     VNEVIKVGTKKVPGITTEEVTETKAVPYETIRENDPTLEEGKEVVSVAGKAGVRTIVY
                     TVTKTDGVETSRVVKSDSVTTPAVNEVIKVGTKKAAVPVITTEEVTETKAVPYETVRE
                     NDPTLEEGKEVVSVAGKAGVRTIVYTVTKTDGVETSRVVKSDSVTTPAVNEVIKVGTK
                     KVPGITTEEVTETEAVPYETVRENDPTLEEGKEVVSVAGKAGVRTIVYTVTKTDGVET
                     SRVVKSDSITTPAVNEVIKVGTKKAPVITTEEVTETEAVPYETVREDDPTLEEGKEVV
                     SVAGKAGVRTIVYTVTKTDGVETGREVKSDVVTTPAVNEVIKVGTKKAPVITTEEVTE
                     TEAVAYETVREDDPTLEEGKEVVSVAGKAGVRTIVYTVTKTDGVETGREVKSDVVTTP
                     AVNEVIKVGTKKAPVITTEEVTETEAVAYETVREDDPTLEEGKEVVSVAGEAGVRTIV
                     YTVTKTDGVETGREVKSDVVTTPAVNEVIKVGTKKAPVITTEEVTETEAVAYETVREN
                     DPTLEEGKEVVSVAGKAGVRTIVYTVTKTDGVETSREVKSDVVTTPAVNEVIKVGTKK
                     VAPSIKNDVQKNEETVTKSQTSQNDKNKTVLPETGERVSTSIWMTFVGFVMMGVAFIK
                     KRKQQ"
     gene            3394..>6917
                     /locus_tag="AC1PJC_001938"
     CDS             3394..>6917
                     /locus_tag="AC1PJC_001938"
                     /inference="COORDINATES: protein motif:HMM:TIGR04226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018262 - isopeptide cross-linking
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isopeptide-forming domain-containing fimbrial
                     protein"
                     /protein_id="HIP6620912.1"
                     /translation="MMFSVLLSQLGMLITSVPNIQAADLGSTTTDGVTTTVSQKGCAI
                     KIETKQEVNWGLPRQPIDLVILQDASGSFKNTIGSVQSALRTLTTAVDANAYDEKNPR
                     LVFTGDEKTTDRVMVATFQGLDGIQYYDNATFYNSGAIYSTGPDTNYTSYNQMGNAGT
                     TYSYKSTNGLLTNSNQVHNFINSIAVGGGTPTVPAIDDVLNSYNQIKNSGGGMANNRK
                     TVFLLVTDGVANGYRAADGRVYIQESFNRTFALQKSWGTSSWPEASQNYLARAAELTQ
                     AGDRIKQAIGEDGTVVVGFWEDVPTFETLTGYGSAYRDGTAFERAGIDVGADKRSVQE
                     VFHAALQSVASPDKTINGNPVSFYVNEQTDANRFAENILKAVTSAMIKENIVGDFTVT
                     DGYKVNSVTINGKKVVETVTNENTEIKGTVTQEGTKVTISVPDSVFNPGKNSFEYDLT
                     KTAAEDAALSEDEETDPADGYQPETKTETVGQLTGRFKVGDYVSDEIGSKDPTTVQVT
                     DLKYCYPSATKSITDKDQSNDTGQLDDPVVKGKKSYAANLSTFSEDFTYQVLYRMNNA
                     PLNFEANPMLIDKLDYRLEYVDAYVTGQDGQRLNNFNIRTTTGNDALGNQRTIVVADI
                     PEAPGTQTQYVNEGKYGAHKFKQYTLHVKVRIKDQYSNANNPVVYRQILQENDGLGIL
                     NQANIVWNGKTNNPEDEEAKTRRSNTVYVKPPVETDIKKDVQSVPNKEAGYKPGNSQE
                     YLENRTQEFYYNVESSWPGLFDTYSISDTLVPELEVISAEVFINDVQNATLTNKLTID
                     ANKQSVALNLVKADITNALNIQIRRATNNYTQPAVVRIGIKAKIRDNANLAKYVVNGE
                     IKVPNEAQVVLNGKPQKSNIVYVTPKEPGISKKINDAKDEHNVLQESEDFTFDIKTKL
                     PDNISAYKSYKIVDVLDERLELKDGAQPFVNAELSQHFDVSYDAASRTVTAAIKPGSF
                     ALLSGGETVHLTIPAKVKSGTAFAQIPNEAKVYYRDPSSTGEKETPPTPPVIVTPPPV
                     IEKQVNGKQHADLTKRDEVFEYTIKSTVPKGADTFEITDELDEALEFAGNQGDVVVKI
                     ADTVVTDAVEVSAVGRNLGIKFTKEQLTNDAGKPIVVTFKSKIRGDANLSADKYVQTG
                     TTLIPNTAKYILNNNPKESNKVTVTPPTP"
BASE COUNT         2269 a         1267 c         1685 g         1696 t
ORIGIN      
        1 aatattatga aaaggggaaa ttttatgaga agtaaaaggt tccaaggact cgttggactt
       61 gctctcattg caagtttgtt gaacccgttg ccgtggttta acaatgtaat gttgatcggt
      121 tcgacggtag tcaatgccaa cgatcttcca cccggggaaa ctcctccagg agaagatgaa
      181 gaacttccag atgcagagca gcttgctttg attaaaaaga tttcaggcta tttgtctgaa
      241 atagaagctt cgcttgcaga tggcgataag gatactgcag actatttgtt tacagaatcc
      301 gatgctatgg gggggtatgc tactagtatc gctgcggtga gtaatgtaaa aaactccgca
      361 gaaagagcaa aactccaagc tcgtattgag gcaatccgcg ctcaattgag cgggactgtc
      421 cagccaccat ctcctgttat cacaacagaa gaagtgacag agacgaaaga agagccgtat
      481 gttaccattc gggtaaagga tccgaacctt gaagaaggca aggaagaagt tgcgacgcca
      541 ggaaaagcag gtgttcgtac aatcgtctat acagtaacga agacagatgg tgtagaaaca
      601 ggtcgcgttg ttaagagtga tgaggttaca actccagtta tcaacgaagt gattagggtt
      661 ggtacgaaga aaacagttgt ttctgtaatt actcttgaag aagagaccga gaccaaagcc
      721 gttccttatg agacaattcg tgagaacgat cctacccttg aagaaggtaa ggaagtcgta
      781 tccgtagctg gtaaggctgg tgttcgtaca atcgtctata cggtaacgaa gacagatggc
      841 gtagaaacaa gccgtgttgt taagagcgat agcattacaa ctccagctgt gaatgaagtg
      901 attaaggttg gtacgaagaa agctccagtc atcacgacag aagaagtaac ggagaccaaa
      961 gccgttcctt atgagacagt tcgcgagaat gatcctaccc tcgaagaagg taaggaagtc
     1021 gtttctgtag ctggtaaggc tggtgtccgt acaatcgtct atactgtgac aaagacagat
     1081 ggcgtagaaa caagtcgtgt tgttaagagc gatagcatta caactccagc tgtaaatgaa
     1141 gtgattaagg ttggtacgaa gaaagctcca gtcatcacaa cagaagaagt aacggagacc
     1201 aaagccgttc cttatgagac agttcgcgag aatgatccta cccttgaaga aggtaaggaa
     1261 gtcgtttctg tagctggtaa ggctggtgtc cgtacaatcg tctatacagt aacgaagaca
     1321 gatggcgtag aaacaagtcg tgttgttaag agcgacagcg ttacaactcc agctgtaaat
     1381 gaagtgatta aggttggtac gaagaaagtt ccaggcatca caacagaaga agtaacggag
     1441 accaaagccg ttccttatga gacaattcgt gagaacgatc ctacccttga agaaggtaag
     1501 gaagtcgtat ccgtagctgg taaggctggt gttcgtacaa tcgtctatac tgtgacgaag
     1561 acagatggcg tagaaacaag tcgtgttgtt aagagcgata gcgttacaac tccagctgta
     1621 aatgaagtga ttaaggttgg tacgaagaaa gcggccgttc cagtcatcac gacagaagaa
     1681 gtaacggaga ccaaagccgt tccttacgag acagttcgcg agaatgatcc tacccttgaa
     1741 gaaggtaagg aagtcgtttc tgtagctggt aaggctggtg ttcgtacaat tgtctatacg
     1801 gtaacgaaga cagatggcgt agaaacaagt cgtgttgtta agagcgatag cgttacaact
     1861 ccagctgtaa atgaagtgat taaggttggt acgaagaaag ttccaggcat cacaacagaa
     1921 gaagtaacgg agacagaagc tgttccttat gagacagttc gcgagaacga tcctaccctt
     1981 gaagaaggta aggaagtcgt ttctgtagct ggtaaggctg gtgtccgtac aatcgtctat
     2041 acagtaacga agacagatgg cgtagaaaca agccgtgttg tcaagagcga tagcattaca
     2101 actccagctg taaatgaagt gattaaggtt ggtacgaaga aagctccagt catcacaaca
     2161 gaagaagtta ccgagacaga agctgttcct tatgagacag ttcgtgaaga cgatcctacc
     2221 ctcgaagaag gtaaggaagt cgtatccgta gctggtaagg ctggtgttcg tacaatcgtc
     2281 tatacagtaa cgaagacaga cggcgtagaa acaggtcgcg aagttaagag cgatgtagtg
     2341 acaactccag ctgtgaatga agtgattaag gttggtacga agaaagctcc agtcatcaca
     2401 acagaagaag ttaccgagac agaagctgtt gcttatgaga cagttcgtga agacgatcct
     2461 accctcgaag aaggtaagga agtcgtatct gtagctggta aggctggtgt tcgtacaatc
     2521 gtctatacag taacgaagac agatggcgta gaaacaggtc gcgaagttaa gagcgatgta
     2581 gtgacaactc cagctgtgaa cgaagtgatt aaggttggta cgaagaaagc tccagtcatc
     2641 acaacagaag aagtaacgga gacagaagct gttgcttatg agacagttcg tgaagacgat
     2701 cctacccttg aagaaggtaa ggaagtcgta tccgtagctg gtgaggctgg tgttcgtaca
     2761 atcgtctata ctgtgacaaa gacagatggc gtagaaacag gtcgcgaagt taagagcgat
     2821 gtagtgacaa ctccagctgt gaacgaagtg attaaggttg gtacgaagaa agctccagtc
     2881 atcacaacag aagaagtaac ggagacagaa gctgttgctt atgagacagt tcgcgagaac
     2941 gatcctaccc ttgaagaagg taaggaagtc gtatccgtag ctggtaaggc tggtgttcgt
     3001 acaatcgtct atacagtaac gaagacagat ggggtagaaa caagtcgcga agttaagagc
     3061 gatgtagtga caactccagc tgtgaacgaa gtgattaagg ttggtacgaa gaaagtggca
     3121 ccttcaatca agaacgatgt tcaaaaaaat gaggaaacgg tgactaaatc tcaaacctca
     3181 caaaatgata aaaataaaac ggtgcttcca gaaacgggag agcgagtgtc tacatctatt
     3241 tggatgacat ttgttggttt cgttatgatg ggggtggcat ttattaaaaa acgcaaacaa
     3301 caataatacg attgttggtg agcgtagggg gatttatcta gaaaggaact tttaatagtt
     3361 atgaaaaagt atcgaaggct gagacatcta tttatgatgt tctcagttct gctatcacaa
     3421 ctaggtatgc ttataacttc cgtcccgaat atccaggccg ccgacttagg ttcaacgacc
     3481 acagatggag taaccacaac cgtctcgcaa aaaggttgtg cgattaagat tgaaacaaag
     3541 caagaagtaa actggggatt accacgtcag ccaattgact tggtaatctt gcaggatgcg
     3601 agtggatctt ttaaaaatac tatcggtagt gtgcaatctg ctctacgaac gctgacgaca
     3661 gcagtggatg cgaatgcata tgatgagaaa aatccacgac ttgttttcac gggagatgag
     3721 aaaacaacag accgtgtaat ggttgccacc ttccaaggtt tggatggaat acagtactat
     3781 gataatgcta cgttttataa tagtggtgca atctatagta caggaccaga taccaattat
     3841 acttcgtata atcaaatggg gaatgctggt accacttatt catacaaatc gacgaatggt
     3901 ttgttgacga attcaaatca ggtccataat ttcattaata gtatcgctgt tggaggagga
     3961 actccgacgg ttccggctat tgatgacgta cttaatagct ataaccagat taaaaattcc
     4021 ggcggaggaa tggcaaacaa taggaagaca gtattcttat tggtgactga tggtgtagct
     4081 aacgggtacc gtgcagctga tggtcgcgta tatatccaag aaagttttaa cagaacattt
     4141 gcgcttcaaa aaagttgggg tacaagctca tggccagagg catctcaaaa ctaccttgct
     4201 cgggcggctg agttgaccca agctggtgac aggattaagc aagcaattgg tgaagacgga
     4261 acagttgttg ttggtttctg ggaggatgtt ccaacctttg aaacactaac aggttacggt
     4321 tctgcatatc gagatggtac agcatttgaa agggcaggaa ttgatgtcgg tgctgataaa
     4381 cggtcagtac aggaagtttt ccatgctgct ttgcaatcag tagcttctcc tgataaaact
     4441 attaacggta atccagtatc tttttatgtc aatgagcaaa cagatgcaaa ccgttttgct
     4501 gaaaacattt taaaagccgt tacatctgcg atgattaaag aaaatattgt tggtgacttt
     4561 acggttacgg atggttataa agttaatagt gttaccatca atggcaagaa ggttgttgag
     4621 acagtaacga acgagaacac agaaatcaaa ggtaccgtta cccaagaagg gactaaagta
     4681 acgatttctg taccagacag cgtctttaat cctggtaaaa actcgtttga atacgacttg
     4741 actaagacag cggcagaaga tgcggctcta tcagaagatg aggaaacaga tcctgccgat
     4801 ggctaccaac cagaaactaa gaccgaaaca gtcggtcagt tgactggacg ctttaaggtt
     4861 ggtgactatg taagtgatga aattggctct aaggatccaa ccactgttca agttactgac
     4921 ttgaaatact gttacccaag tgcaacgaag tctatcactg ataaagatca atctaatgat
     4981 acaggtcagt tggatgatcc agttgtaaaa ggtaaaaagt catacgctgc taatttgagt
     5041 acatttagcg aagactttac gtaccaagtt ctttatcgca tgaataatgc gccattgaac
     5101 ttcgaagcaa atcctatgtt gatcgacaag ctagactatc gtttagagta tgtcgatgct
     5161 tatgtgacag gtcaagatgg ccaacgtcta aataatttca acattcgaac gaccacaggg
     5221 aacgatgccc taggtaatca acgaacgatt gttgttgcgg atattccgga agcgcctgga
     5281 acacagactc agtatgtgaa tgaaggtaag tatggagctc acaaattcaa gcaatatact
     5341 cttcatgtga aggtgcgtat taaggatcaa tattcgaatg cgaacaatcc ggttgtttat
     5401 cgtcaaattt tacaagagaa tgatggtttg ggtatcctaa accaagcaaa cattgtatgg
     5461 aacggtaaga caaataatcc ggaagatgaa gaagctaaga cacgtcgttc aaatactgtt
     5521 tatgttaaac ctcctgtgga aacagacatc aaaaaagatg ttcaaagtgt tccaaataag
     5581 gaagcaggtt ataaacctgg aaactcgcaa gagtatctag aaaatagaac gcaagaattc
     5641 tactataatg tggagtcttc atggccaggt ttgtttgata cctactctat ttcagatacc
     5701 ctagttcctg agctagaggt tatctcggca gaggtgttta ttaacgatgt acaaaatgct
     5761 acgttaacta acaaattaac aattgatgct aacaagcagt ccgttgcttt gaacttggtt
     5821 aaagcagata tcactaatgc gttgaatatc caaattcgcc gtgcaacaaa taactacact
     5881 caaccagctg tggttagaat tggaatcaag gcaaaaattc gagataatgc gaatttagct
     5941 aagtatgttg tgaatggcga aatcaaggtt cctaacgaag cacaagtagt gctgaacggg
     6001 aaaccgcaaa agtctaatat tgtatatgtg actccaaaag agccaggaat cagcaagaaa
     6061 atcaacgatg cgaaggatga acacaacgtt ctccaagaga gtgaagattt cacgtttgat
     6121 attaagacaa aattgcctga taatatcagc gcttataagt catacaagat tgttgacgtc
     6181 ttggatgaac gtcttgagct taaagatgga gcacaaccat ttgtcaatgc agaattaagt
     6241 caacattttg atgtaagtta cgatgcggct agccgtactg taacagcagc aatcaaacca
     6301 ggtagttttg cactattatc tggaggcgag acagttcatt taacgattcc tgctaaagtg
     6361 aaatccggta cagcctttgc acagattcct aatgaggcaa aagtctacta ccgtgatcca
     6421 tctagcacag gtgaaaaaga aactccgcca actccgccag ttattgttac tccaccacca
     6481 gttattgaaa aacaagtcaa tgggaaacag cacgccgacc ttacgaagcg tgatgaggtg
     6541 ttcgaataca cgatcaagtc aacggttcct aaaggtgcag acacgtttga aatcactgat
     6601 gagttggatg aggcacttga atttgcagga aaccaaggtg atgtagttgt taaaattgca
     6661 gatacagtgg ttacagatgc agttgaagta tcagctgtcg gacgtaattt aggtattaag
     6721 ttcacgaaag aacagcttac aaatgatgca ggtaagccaa tagttgttac ctttaaatct
     6781 aagattagag gagatgcaaa cctgtcagca gataagtatg ttcaaactgg aacaacactt
     6841 attccgaata cagctaagta tattctgaac aataatccta aagaatctaa taaagtaacc
     6901 gtcactccac caactcc
//
LOCUS       DBNFCX010000105         6661 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.105, whole genome shotgun sequence.
ACCESSION   DBNFCX010000105 DBNFCX010000000
VERSION     DBNFCX010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 6661)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6661)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6661
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.105"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            103..903
                     /locus_tag="AC1PJC_001939"
     CDS             103..903
                     /locus_tag="AC1PJC_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HIP6620913.1"
                     /translation="MKKILALAATVLAGLTLAACSSTSSQSALDKIKEKGTLVVATSP
                     DYAPFEFQALVDGKNEVVGADIILAQKIADELGVKLEVSAMSFDNVLSSVQNGKADIA
                     IAGLSYSEERAKVFDFSESYYQISDVLLIKKDSANSLTSIDAMSGKTLAVQKGSTQEA
                     YAQENISQANLISLTLMGEAVNELKSGKVDAILMDSPVAAGYVSQNSDLAVASVEFPT
                     IDENSKVIALPKGSTELKTAIDKVIAEVKASGEFDTFLEKAATYTSVE"
     gene            complement(1031..2869)
                     /gene="glgB"
                     /locus_tag="AC1PJC_001940"
     CDS             complement(1031..2869)
                     /gene="glgB"
                     /locus_tag="AC1PJC_001940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003844 - 1,4-alpha-glucan branching
                     enzyme activity [Evidence IEA];
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein GlgB"
                     /protein_id="HIP6620914.1"
                     /translation="MTEFTDLDLYYMNAGEHTTLYEKMGAHIIKERNKIIGTQFRVYA
                     PNAREVFLVGNFNEWQRSHSMEREIDGVFQLYVDGLKSLEDYKYLIITHDGREIYKAD
                     PYAFFSQVRPDTASTTYNSRYKFKDDLWMYNRVNYDFKEQPVSIYEVHLGSWKQKFAN
                     KNEGGAPVEAFNSYKEITPLLIEHIKENNYTHIELLPITEHPLDASWGYQVTGYYSPT
                     SRYGKPDELKYLVDQCHQAGIGVILDWVPLHFCKDAHGLYQFDGSWLYEYSYEQDREN
                     HQWGTANFDLGKGLTRSFLLSNLKYWLEYFHFDGIRVDALSYLLYWRGETDEDKINHA
                     AIDFIKRVNAMVHTDYKGVLMIAEDSSSFPKVTHPLEDGGIGFDMKWDLGWMNDTLKF
                     VERPAIYRKYHSNEITFGMYYNQNEQFLLPLSHDEVVHGKHSIIEKMNGDYEDKFHLA
                     RVYYSFYFAHPGKKLLFMGNEWGHIREWHEYTEMDWGLLQFPIHHSFYQMMKTLSTFY
                     KEHDAFWKYDYQAYEKGFNWVKIDEEASLYAFSRTSDEQEILTIHNFNDQELFDVHLD
                     LPADSEYKLVFSSNAIPMDTFSLYPDENGARITVPRLTSFYLERVK"
     gene            complement(2942..4387)
                     /gene="glgA"
                     /locus_tag="AC1PJC_001941"
     CDS             complement(2942..4387)
                     /gene="glgA"
                     /locus_tag="AC1PJC_001941"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004373 - alpha-1,4-glucan
                     glucosyltransferase (UDP-glucose donor) activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HIP6620915.1"
                     /translation="MTKKSVLFVASEGLPFIKTGGLADVIGSLPKELVKQGLDVRVVL
                     PLYKKIAVNNHSDFDYVSSFDVRAGDIQSMANVYSQVVDGVTFYFIEHRDFFERDELY
                     GYDDDAMRFGYFQHATCRLLEALHFFPDVMHTHDWHTAALPFLCRTFYSYREEFRNIK
                     HVFTIHNLAFQGIFHKQALWSALGMDYSYYLDGIARFHDECISFMKLGILYADKVTTV
                     SETYAREILTEEFGENMQHVLELRKYDLVGIVNGIDYDSWDSQTDQYLVRNYSLETIE
                     SKKANKLALQAQFALPQDENVLLIGIVSRLTWQKGFYLLTEVLGHLLQAHVQFVILGN
                     GEEDIENAFNHFKHAYPDKFAFYRGYNEPLAHQIYAASDLFLMPSMFEPCGISQLISM
                     HYGTLPLVRETGGLVDTVAPYNMSTKEGTGFSFGGRDAYNMRQVYDLALQTYYDRPDD
                     WYAMVEQAMKRDFSWTASAEKYIWLYREISG"
     gene            complement(4396..5511)
                     /gene="glgD"
                     /locus_tag="AC1PJC_001942"
     CDS             complement(4396..5511)
                     /gene="glgD"
                     /locus_tag="AC1PJC_001942"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008878 - glucose-1-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase subunit
                     GlgD"
                     /protein_id="HIP6620916.1"
                     /translation="MLRNTLGIVNIEGNNVHFGDVMKHRGVQAFGFLGRYRLIDFALS
                     NMSNSGITEFQVYMPAEMRSTIQHVGTGKHYNINSKRGTLRLLNSATDPNSVYRHDIN
                     AFTENIHYIENSTKDYVLVAPSYFIYSQDFSKVMDDHIATDADITVLYKNVSDAKENF
                     IGCQTLKFGEDRRVVAFEENHGKYKNRPVSLEAYIMKRTTFIDLIKRANKVSSLYWLK
                     DILRDTVDQYKIMGYAHRDYVACINTTASYFNTQIELIDQDTRKLLFKHDWPIHTQTS
                     DSSPCLYGPLAEVKRSLISNGANINGQVENSVIDRDVIIEEGVVIKNSIILNGVTIKS
                     GANIENAIIDKATKIIHPIDIKGSETSPSYLKPHQII"
     gene            complement(5524..6651)
                     /locus_tag="AC1PJC_001943"
     CDS             complement(5524..6651)
                     /locus_tag="AC1PJC_001943"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008878 - glucose-1-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HIP6620917.1"
                     /translation="MAQNKMLAMILAGGRGTRLEGLTKKVAKPAVAFGGKYRIIDFPL
                     SNCANSGIDIVGVLTQYEPVLLNSYVAQSQRWGLDVQGSGIFVLPPSEKIEGFGLYKG
                     TADAITQNIDFIDLHDPEYVLILSGDHIYKMNYDKLLDTHIQKKADATIAVIEVPIKE
                     ASRFGIMNTDEDYRIEEFEEKPENPKSNLASMGIYIFTWKTLKKYLQEDDKLDTSSHD
                     FGHDIIPKYLEDGRTLIAHPFRGYWKDVGTVNSLWESNMDLIDHAGDLDLSDRSWRIY
                     SEDKGSPAQVIGATATVKSAYIDKGAIIDGTVEHSVISTDVQVNQNAVVKNSVVLPGA
                     IIGEGVELDYVIVAENIKIADGVKLTGDIDHILLIDKNVTK"
BASE COUNT         1976 a         1292 c         1368 g         2025 t
ORIGIN      
        1 aatacattct gaaaaattgc aagaaaatac aatgaaaatc aatacgcttg tgttttttag
       61 aataagtatt ttattaaaat aaagagaagg tatttaggaa atatgaaaaa aatcttggca
      121 ttagcagcaa cagttttagc aggactgaca ttggcagctt gttcttcgac gtcatcacaa
      181 tccgcattag ataaaattaa agaaaaaggt acattggtag tggcaactag tccagactat
      241 gctccattcg agtttcaggc actagttgat ggaaagaatg aagttgttgg tgcagatatc
      301 atattggctc aaaaaatagc cgacgaactt ggggtcaagc ttgaagtttc agcaatgagt
      361 tttgacaatg tattgtctag cgttcaaaat ggcaaagctg atattgcaat tgctggtcta
      421 tcttattcgg aagagcgtgc aaaagttttt gatttctctg aaagttacta tcaaatttct
      481 gatgtattac ttatcaaaaa agatagcgct aattcactca cttcaattga tgctatgagc
      541 gggaaaactc tcgcggtaca aaagggttca acacaggaag cctacgcaca agaaaacatt
      601 agtcaagcta acctaatttc tttaaccttg atgggtgaag ctgtaaatga gctcaaatca
      661 ggaaaagttg atgctatttt aatggattct ccagttgctg ctggttatgt ttcacagaat
      721 tcagatttag ccgttgcatc cgttgaattt ccaacgattg atgagaattc gaaagtcatt
      781 gctttgccaa aaggtagtac agaactaaaa actgcgatag acaaggttat cgcagaagta
      841 aaagcaagtg gtgagtttga tactttcctt gagaaagctg caacatatac aagtgttgaa
      901 taagagaaac aaacaatcat cggaaacgat ggttgttttt gcatgcaaaa aagaatggag
      961 taagtgagcc acaccccaaa agttagacag aaaatttggg tcggttcaat actccatttt
     1021 ttacagataa ttatttcaca cgctctagat aaaaactggt caaacgtggt acagtaattc
     1081 tggctccatt ttcatcggga tagaggctaa atgtgtccat tggaatagca ttagatgaga
     1141 agacaagttt atattcgctg tcagctggca aatctaagtg tacatcaaat agttcttgat
     1201 cattaaagtt atgaatagtc aagatttctt gctcatcact agtgcgagaa aaagcataca
     1261 ggcttgcttc ttcatctatt tttacccaat taaatccttt ttcataggct tggtagtcat
     1321 atttccagaa agcatcatgt tctttataga aagtagataa tgttttcatc atttgataga
     1381 aagaatggtg gattggaaat tgtagcagtc cccagtccat ttctgtatat tcatgccatt
     1441 cacggatgtg accccattca tttcccatga agagtaattt ctttccagga tgggcaaagt
     1501 aaaagctgta gtagactcga gccagatgga acttatcttc gtagtcgcca ttcatcttct
     1561 cgataatgga gtgcttccca tgaacaactt cgtcgtgcga aagtggtagt aagaattgct
     1621 cgttttggtt atagtacata ccaaaagtga tttcatttga gtgatatttt cgataaatag
     1681 cagggcgttc cacgaatttt agtgtatcat tcatccagcc cagatcccat ttcatatcaa
     1741 atccaatacc gccatcttct agaggatgtg tgactttagg gaagcttgaa gagtcttcag
     1801 caatcatcag gactccctta tagtcggtat ggaccatggc attgacacgt ttgataaagt
     1861 caattgcggc atgatttatc ttatcttcat ctgtttcacc acgccaatag aggagataag
     1921 atagtgcatc aacacggatg ccatcaaaat ggaaatattc caaccagtat tttaaattag
     1981 aaagaaggaa agaacgagtc agtccttttc caaggtcaaa attagcagtc ccccactggt
     2041 ggttttcacg gtcttgttcg taggagtatt cgtatagcca actaccatca aactggtaga
     2101 gcccgtgagc atctttacag aaatgaagtg gtacccagtc aaggatcact ccgattcctg
     2161 cttggtgaca ttggtcaact aaatacttaa gttcatctgg cttgccatag cgactagttg
     2221 gactgtagta gcctgttacc tgatagcccc aagacgcatc gagaggatgc tcggtaattg
     2281 gcaataactc aatgtgtgtg tagttatttt ccttgatatg ttcgatgaga agtggagtaa
     2341 tttccttata actattgaaa gcttctacag gagctcctcc ttcattttta ttagcaaatt
     2401 tttgcttcca cgaacctaag tgcacctcgt agatggatac tggctgttct ttaaaatcat
     2461 agttaacacg attatacatc cagaggtcat ctttgaattt ataacgcgaa ttgtaggttg
     2521 tagaggcagt gtctggacga acttggctga aaaatgcata agggtcagcc ttatatattt
     2581 cacgcccatc gtgtgtgata atcaggtatt tataatcttc aagggatttt aatccgtcta
     2641 cataaagttg aaacactcca tcaatttcac gctccataga gtgactgcgt tgccactcgt
     2701 taaagttgcc aactaagaat acttctctgg cattcggggc atagacacga aattgggttc
     2761 cgataatttt gtttcgttct tttataatgt gagcacccat tttttcgtaa agagtggtat
     2821 gctcaccagc attcatataa tataaatcta ggtcagtaaa ttctgtcata gcaatctcca
     2881 ttaccgaaaa ggagtggact agggtcacac tccgattcag tttatttttt catcttattt
     2941 cctaaccact aatttcacgg tagagccaaa tgtatttctc tgccgaagct gtccaactaa
     3001 aatcacgctt catagcttgt tcaaccatgg cataccagtc atcgggacgg tcatagtagg
     3061 tttgaagggc taaatcatag acttgtcgca tattgtaagc gtcacgccct ccaaagctaa
     3121 aaccagttcc ttccttggta gacatattgt atggtgctac agtatcaacc aagccacctg
     3181 tttcacgcac tagagggagt gttccgtagt gcattgaaat caactggcta atgccgcatg
     3241 gttcaaacat agaaggcatg aggaagagat cacttgctgc ataaatttgg tgggcaagtg
     3301 gttcattgta accacggtag aatgcaaatt tatcaggata agcatgttta aagtgattaa
     3361 aggcattttc aatgtcttcc tcaccattgc ctaagataac aaattggaca tgggcttgaa
     3421 gaagatggcc aagtacctcg gtcaagaggt agaacccttt ttgccatgtc aaacgagaga
     3481 cgatacctat caataggaca ttctcatctt gtggaagtgc aaattgtgct tgcagggcca
     3541 gtttattagc ctttttactt tcaatcgttt caagactata atttctcaca aggtactggt
     3601 ctgtttgact atcccaactg tcatagtcga taccattgac aataccaacc aagtcatatt
     3661 tgcgcaactc tagtacatgt tgcatgtttt cgccgaattc ttccgttagg atttcgcgag
     3721 cataagtttc agaaactgta gtaaccttgt cagcgtatag gataccaagc ttcatgaagc
     3781 tgatacattc atcatgaaaa cgtgcaatac catccaaata gtagctatag tccatgccaa
     3841 gcgctgacca aagtgcttgt ttgtggaaaa taccttgaaa agccaagtta tgaatagtga
     3901 atacatgctt gatattgcgg aattcttcgc ggtagctata aaaagtacgg caaaggaatg
     3961 gaagggcagc agtgtgccag tcatgtgtgt gcatgacatc cgggaagaaa tgaagtgctt
     4021 ctaacagacg acatgtagca tgttggaaat agccaaaacg catggcatca tcgtcatatc
     4081 catatagttc atcgcgttca aagaaatcgc ggtgctcaat aaaatagaat gtcactccat
     4141 caacaacctg actgtaaaca tttgccatag attggatgtc gccagcccgc acatcaaaac
     4201 ttgatacgta atcgaaatca gagtgattgt ttactgcaat ttttttgtag agtggtagaa
     4261 cgactcggac atctaaaccc tgttttacca attctttggg taaagagcca ataacatcag
     4321 ccaatccgcc agtcttgatg aatggaagtc cctcggatgc tacaaagaga acagattttt
     4381 ttgtcatgtt agctcctaaa tgatttggtg tggtttcaag tatgaaggcg aagtttcgct
     4441 tcccttgatg tcaattgggt gaataatttt agttgcttta tcgataattg cattttcaat
     4501 attcgcccca ctcttgattg tcacgccatt gagaatgatt gagtttttga taacaacacc
     4561 ttcttcaatg ataacatcgc ggtcaatgac tgaattttcg acttgaccat tgatattcgc
     4621 tccatttgaa attaggctac gtttgacctc tgccaatgga ccatacaaac atggtgagct
     4681 atcacttgtt tgggtatgga ttggccaatc atgtttgaag aggagtttgc gggtatcttg
     4741 gtcaatcaat tcaatttgag tattgaagta ggaagctgtc gtattgatac atgcgacata
     4801 atcacgatgt gcatagccca taatcttgta ctggtcaact gtatcacgta aaatatcttt
     4861 taaccagtag agagacgata ctttgttagc acgtttaatc aagtcgataa atgtagtccg
     4921 tttcataatg taggcttcaa gggaaacggg acggttttta tatttaccgt ggttttcttc
     4981 aaaagctacg acacgacggt cttcaccaaa tttgagagtt tggcagccga tgaaattttc
     5041 tttagcatct gaaacgtttt tataaagaac ggtaatatca gcatccgttg caatatggtc
     5101 atccatgact tttgaaaaat cctggctata gatgaagtaa gatggagcaa ctagcacata
     5161 atcttttgta gaattttcga tgtagtggat gttttctgtg aaggcattaa tatcgtgacg
     5221 atagacacta tttgggtctg ttgcgctatt gagcaagcga agggtaccgc gtttgctgtt
     5281 gatattatag tgtttccctg taccaacgtg ctgaattgtt gaacgcattt cggcaggcat
     5341 gtatacttgg aattctgtaa ttccagagtt tgacatattg gatagagcaa agtcaattag
     5401 gcgataacga cctaagaaac cgaaagcttg tacgccacgg tgcttcatca cgtcaccaaa
     5461 atgtacgttg tttccttcaa tatttacaat tccgagagta tttcttagca tagcagtcct
     5521 ttcttacttg gttacattct tgtcgatcaa gaggatatgg tcgatgtctc ctgtgagttt
     5581 aactccgtca gcaattttaa tattttcagc gacgatgacg tagtcaagct caacaccttc
     5641 gccgataata gcaccaggta ggacgacaga attttttact acggcatttt ggttgacttg
     5701 cacatctgtt gaaataacag aatgttctac agtaccatcg atgattgccc ctttatcaat
     5761 ataggcagat ttaaccgttg cagttgcacc gatcacctga gcaggtgagc ccttgtcttc
     5821 tgaatagatt ctccatgagc ggtcagaaag gtccaaatct ccagcgtgat caatcaagtc
     5881 catattggat tcccagaggc tgttaacggt acctacgtct ttccaataac cacggaatgg
     5941 atgggcaatg agagtgcggc catcttccaa gtatttcgga atgatgtcgt gtccaaaatc
     6001 gtgagatgaa gtgtccaatt tgtcatcttc ttgaaggtac tttttcaagg tcttccaagt
     6061 gaagatatag atacccattg atgctaaatt gctcttagga ttttctggtt tttcttcaaa
     6121 ttcttcaata cggtaatctt cgtccgtatt catgatacca aaacgtgaag cttctttgat
     6181 cggaacttcg ataaccgcaa tcgtggcatc tgcttttttc tgaatatgtg tatcaaggag
     6241 tttgtcgtag ttcatcttat agatgtggtc accagacaaa atcaatacgt actctggatc
     6301 gtgaagatca atgaaatcaa tgttctgtgt aatagcgtcg gctgtacctt tgtaaagtcc
     6361 gaaaccttcg attttttcac tcggtggtaa tacaaagatg ccagatcctt gtacatcaag
     6421 tccccaacgt tgagactgtg caacgtatga gttcaagaga acaggctcat actgagtcaa
     6481 aactccgaca atatcaatac ctgagttggc acagttactg agaggaaagt caataatgcg
     6541 gtactttccg ccaaatgcga ccgctggttt ggcgactttt tttgtcaacc cttctagacg
     6601 tgttccacgt ccaccagcaa gaatcatagc taacatttta ttttgagcca tctaaccact
     6661 c
//
LOCUS       DBNFCX010000106         6488 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.106, whole genome shotgun sequence.
ACCESSION   DBNFCX010000106 DBNFCX010000000
VERSION     DBNFCX010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 6488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6488
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.106"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(28..651)
                     /gene="nth"
                     /locus_tag="AC1PJC_001944"
     CDS             complement(28..651)
                     /gene="nth"
                     /locus_tag="AC1PJC_001944"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018378713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140078 - class I DNA-(apurinic or
                     apyrimidinic site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HIP6620918.1"
                     /translation="MVLSKKRARKVIEEIIALYPDAKPSLDFRNHFELVCAVLLSAQT
                     TDAAVNKATPGLFAAFPTPQAMAAAKVKDIEPYISRLGLYRNKAKFLKECAQQLLERH
                     NGIVPQTREELEALAGVGRKTANVVLSVGFGIPAFAVDTHVGRICKHHDIVKKSATPL
                     ETEKRVMEVLPPELWLPAHQAMIYFGREVCHPKNPECEKFPQLYEFD"
     gene            749..1600
                     /locus_tag="AC1PJC_001945"
     CDS             749..1600
                     /locus_tag="AC1PJC_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HIP6620919.1"
                     /translation="MDLQELCRKVIQARPRNSHKGSYGRVLLIGGLYPYGGAIIMAAL
                     ATVNSGAGLVTVATEKDNIPALHSHLPEAMAFSFDDQALLISSLENADLVLIGPGLGE
                     NSRAEQLLDFVFGHLSDQQILVLDGSALTLVAKQNRKNFPCKQVILTPHQKEWERLSA
                     IPVADQTSQRNLEALQSFQENTILVAKSSATQILKTQPNQVTPIGAGGPYQATGGMGD
                     TLAGMIAGFAVQFPHVQLYERILVATYLHSYIADQLAQDYYLVKPTDVSRNIQKIMLQ
                     FQTQTTA"
     gene            complement(1655..6412)
                     /locus_tag="AC1PJC_001946"
     CDS             complement(1655..6412)
                     /locus_tag="AC1PJC_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HIP6620920.1"
                     /translation="MKKKETFSLRKYKIGTVSVLLGAVFLFAGAPSVAADELTSLVET
                     KVEATVPDAIVSESASESPVVEELVDTSVEATPTDVTTTDNEEEIPGSEALENITNAE
                     VETTQPAVETPVISEKKVEEEEKLSVADETTAITNQEEAKPQNIDSNTIITVPKVWDS
                     GYKGEGTVVAIIDSGLDVDHDVLHISDLSTAKYKSEKEIEAAKEAAGITYGEWFNDKV
                     VFGYNYVDVNTVLKEEDKRSHGMHVTSIATGNPTQPVAGQLMYGVAPEAQVMFMRVFS
                     DLKATTGAALYVKAIEDAVKLGADSINLSLGGANGSVVNMNENVTAAIEAARRAGVSV
                     VIAAGNDGTFGSGHSNPSADYPDYGLVGAPSTARDAISVASYNNTTVGSKVINIIGLE
                     NNADLNYGKSSFDNPEKSPVPFEIGKEYEYVYAGIGQASDFDGLDLTGKLALIKRGTI
                     TFSEKIANATAAGAVGVVIFNSRPGEANVSMQLDDTAIAIPSVFIPLEFGEALAANSY
                     KIAFNNETDIRPNPEAGLLSDFSSWGLSADGELKPDLAAPGGAIYAAINDNDYANMQG
                     TSMASPHVAGAAVLVKQYLQATYPTKSPQEIEALVKHLLMSTAKAHVNKETTAYTSPR
                     QQGAGIIDTAAAISTGLYLTGEDGYGSITLGNVEDTFSFTVTLHNITNEDKTLNYSTQ
                     LTTDTVQNGLITLAPRLLAEIPGGKVTVKANSSTTVTINVDASSFAEELTGLMKNGYY
                     LEGFVRFTDVADGGDIVSIPYVGFRGEFQNLAVLEEPIYNLIADGKGGFYFEPVTAQP
                     DTVDISHHYTGLVTGSTELIYSTDKRSDFAIKTLGTFKNEAGYFVLELDESGKPHLAI
                     SPNGDDNQDSLAFKGVFLRNYTDLVASVYAVDDTERTNPLWESQPQSGNKNFYSGDPK
                     NPKSSIIYPTEWNGTDSEGNALADGKYQYVLTYSSEVPGAAVQTMIFDVIIDRESPVI
                     TTATYDETNFTFNPRPAIEKGESGLYREQVFYLVADASGVTTIPSLLENGDVTVSDNK
                     VFVAQNDDGSFTLPLDLADISKFYYTVEDYAGNISYEKVENLISIGNEKGLVTVNILD
                     KDTNSPVPILFSYSVTDETGKIVAELPRYAGDTSVLKLPFGTYTFDLFLYDTEWSSLA
                     GETKAVVTISEENSTAEVNFYVTLKDKANLLVDIDALLPSGSTIQLVSTDGQTIQLPN
                     AKYSKTDYGKFVPVGTYTILPTLPEGYEFLEELDVAVLANQSNVKKLTLINKVALKEL
                     IAELAGLEETARYYNASPELQTAYAKALEDANAVYANKHNQAQVDSAVASLVAAREQL
                     NGQATDKEKLIAEVSNYTPTQANFIYYNAENTKQIAYDTAVRSAQLVLNQENVTQAVV
                     NQALADLLAAKANLDGQKTDISALRSAVSVSSVLKATDAKYLNASENVKQAYDQAVEA
                     AKAILADESASQASVDQALAVLTSAQAELDGVATSTNGAKEPANTATDKKDEGTVTPP
                     PIDSEKVDVQAPPVKDTGNSGHVPIGQKPKPQPTLPRPVTLQASLSSPNQEKQVTQLP
                     NTGDNDTRYYLVLGVIIGLGTPLVSKRRHKEEV"
BASE COUNT         1780 a         1392 c         1301 g         2015 t
ORIGIN      
        1 aaaaaatctt caaaaacaga agatttttta gtcaaattca tataattgtg ggaatttttc
       61 gcattcaggg ttcttaggat ggcaaacctc acgaccaaaa taaatcatag cttgatgagc
      121 agggagccag agttcaggag gtaggacttc catgactcgt ttttctgttt ccaggggtgt
      181 agccgatttt ttgacaatat cgtggtgttt acaaatccgt cccacgtggg tatcaactgc
      241 aaaggctggg attccgaaac cgacacttaa gacaacattg gccgtttttc ttcccactcc
      301 tgccagagct tctaattcct cacgagtctg cggaacaatg ccattatgcc gttccaataa
      361 ctgctgggcg cattctttta aaaatttggc tttattacga tacaaaccca aacgagaaat
      421 ataaggctca atatccttta cttttgctgc tgccatggct tgtggcgttg ggaaagcagc
      481 gaacaaacca ggtgttgcct tattcaccgc agcgtctgta gtttgagcag ataagagcac
      541 tgcacatacc aactcaaagt gatttcgaaa atccaaactt ggcttagcat caggatatag
      601 agcgatgatt tcttcaataa cttttcttgc acgttttttt gataatacca tgaattcatt
      661 atagcatgaa aacttggatt tatctaaaat ctggattgtc ataaacctca ttcctcgtga
      721 tataataaga agaaaagggg gaataagtat ggacttacaa gaactctgta gaaaggttat
      781 tcaagcaaga ccacgcaata gccataaggg aagctatggt cgagtcttgc tgattggtgg
      841 actgtatcct tatggtggag cgattatcat ggccgcacta gcaaccgtca acagtggagc
      901 aggcttggta actgttgcta ctgaaaaaga caacatacca gccttacata gtcatctgcc
      961 tgaagccatg gcattttcat ttgacgatca agccttgctg ataagtagct tagaaaatgc
     1021 tgacttggta ctgattggtc caggtttggg ggaaaatagc agagctgaac agttattgga
     1081 ctttgttttt ggacatttat ctgaccagca gattttagtt cttgacggct cagcccttac
     1141 cttagtcgca aaacaaaaca gaaagaactt cccgtgtaaa caagtcatcc tgacccccca
     1201 ccagaaagaa tgggaacggt tatcagccat tccggttgct gaccaaacaa gccaaagaaa
     1261 tcttgaagcc ttgcaatctt ttcaagaaaa tacaatcctt gtagctaaaa gttctgctac
     1321 tcaaatccta aaaacccagc caaaccaagt cactccaata ggagctggtg gtccctacca
     1381 agcaacagga ggtatgggag atactcttgc aggtatgatt gcaggatttg ctgtacaatt
     1441 tccccatgtt caactatatg aaagaatcct tgtggcaacc tacctccact cctatattgc
     1501 cgaccaactg gctcaagatt attatcttgt aaagccaact gatgtctcaa gaaacatcca
     1561 aaagataatg cttcaatttc aaacacaaac aaccgcctaa tcaatgatta agcggtttta
     1621 ttatttagca aacttgtgat aaagctagtg ttggttatac ttcttcctta tgacgtcgtt
     1681 tgcttactaa cggagtccct agcccaataa tgacaccaag aacaagatag tatctcgtat
     1741 cattgtctcc agtatttggt agttgagtca cctgtttttc ttgattaggg ctagatagac
     1801 tagcttgcaa agtgactgga cgaggtaaag ttggttgagg ttttggcttc tgccctatcg
     1861 gtacatgccc tgaattccca gtatctttta caggaggtgc ttgtacatca actttttctg
     1921 agtctatagg tggaggcgtt acagtgcctt catctttttt gtcagtggca gtatttgctg
     1981 gctctttggc accatttgtt gaagtagcaa caccatccag ttctgcctga gcgcttgtca
     2041 gaacggctag agcttgatcg acacttgctt ggcttgcaga ttcatcagct agaatcgctt
     2101 tcgctgcttc aactgcctgg tcataagctt gtttcacgtt ttcagatgca ttgagatact
     2161 tagcatctgt cgcttttaat acggaagaaa cggatactgc gctacgaagg gctgaaatat
     2221 cagtcttttg accatctaag ttggctttcg ccgctaacaa gtccgccaac gcttggttga
     2281 caactgcctg tgttacattc tcttggttca atacaagttg tgctgaacga acagctgtat
     2341 cataggcaat ttgtttggta ttttcagcat tgtaataaat aaagtttgcc tgagtcggtg
     2401 tgtagtttga tacttcagca attagttttt ccttatcggt agcctgaccg tttagctgtt
     2461 ctctcgctgc cacaagactg gcaactgctg aatctacttg tgcctgattg tgtttgttgg
     2521 catatactgc attggcatct tctaatgctt tggcataggc agtttgaagt tctggactag
     2581 cattgtaata acgcgctgtt tcttcaagtc cagcaagttc agcaatcagt tctttcaaag
     2641 caactttatt aatcaaggtt aatttcttaa catttgactg gtttgcaagt actgctacgt
     2701 ctaattcttc caaaaattca tagccttctg ggagggttgg aaggatagtg taggtaccaa
     2761 ctggtacaaa tttaccataa tcggtcttag aatatttagc atttggtagc tgaatagtct
     2821 ggccatcagt acttaccagt tggatggttg aaccagaagg tagtaatgca tcaatatcta
     2881 ccagcaagtt ggccttatct ttcaaagtca catagaaatt cacctcggca gtgctatttt
     2941 cttccgaaat cgtcacgact gcttttgttt cacctgctag gcttgaccat tctgtatcat
     3001 ataagaataa atcaaaggtg taagtaccaa atggtagctt aagaacgcta gtatcgccgg
     3061 catatcgtgg taattctgca acaatcttgc ctgtttcatc ggtgactgag taagagaaaa
     3121 gtattggtac aggactattt gtatctttat caagaatatt gactgttacc aacccttttt
     3181 cattgccgat actgatcaga ttctctactt tttcatagct gatgttacca gcataatcct
     3241 ctactgtgta gtagaatttt gaaatatctg caagatcaag aggcaatgta aaggagccat
     3301 cgtcgttttg tgccacaaat accttgttat cagaaacggt tacatctcca ttttctaata
     3361 aggaaggaat agttgtcaca ccgcttgcat ctgctacaag atagaatact tgctcgcgat
     3421 atagaccgga ttctcctttt tcaatggctg gacgagggtt aaatgtaaag tttgtttcat
     3481 cataggtagc tgtggtgata actggtgatt ctctatcgat gataacgtcg aaaatcatag
     3541 tttgtactgc tgcacctgga acttcagatg agtaggtcaa aacgtattga tacttaccat
     3601 ctgctaaagc atttccctcg ctgtctgtcc cattccattc agtagggtaa ataatgcttg
     3661 attttggatt tttaggatca ccactataga agttcttatt gcctgactgt ggttgacttt
     3721 cccaaagtgg atttgttcgc tcagtatcat ctacagcata gacgcttgcg actaaatcag
     3781 tataatttct caagaagaca cctttgaaag cgagcgaatc ttggttgtca tccccatttg
     3841 gcgagatagc taaatgaggc ttaccagact catcgagctc taaaacaaag tatcctgctt
     3901 catttttaaa tgtaccaagt gtcttgatcg caaagtcaga tcgtttgtct gtagaataga
     3961 ttaactccgt acttcctgta acaagacctg tgtagtgatg gctgatgtca acagtatctg
     4021 gttgtgctgt aacaggttca aagtagaagc cccccttgcc atcggcaata agattgtaaa
     4081 tcggctcttc tagaacggct agattttgga attccccacg gaaaccaacg tatggaatgc
     4141 tgacaatatc accaccatcg gctacatctg taaatcgaac aaaaccttca agatagtaac
     4201 cgtttttcat taaacctgtc aattcttctg caaagcttga tgcatcgaca ttaattgtaa
     4261 cagttgtact tgaattggct ttcacagtca ccttaccgcc cggaatctct gctaatagac
     4321 gcggagccaa ggtgatcaat ccgttttgga cagtatccgt tgttaattgc gttgagtagt
     4381 ttaaagtctt atcttcgttt gtaatgttat gaagtgtgac cgtaaagctg aatgtatcct
     4441 caacatttcc caaggtaatg ctgccataac cgtcttcgcc agtcaaatat aaacctgtag
     4501 aaatagctgc cgcagtatcg atgatacctg caccttgttg gcgtggggaa gtgtaggctg
     4561 ttgtttcttt gttcacatgt gctttagcag tagacataag caagtgtttt actaaggctt
     4621 cgatttcttg aggggactta gtagggtaag ttgcctgtaa atattgtttt actagtacgg
     4681 ctgctcctgc tacgtgtggt gaagccatac ttgttccctg catgttggca tagtcattat
     4741 cattgatggc tgcataaata gcaccacctg gagcagctaa gtctggtttt agctcgccat
     4801 ccgctgatag accccaactt gaaaaatctg aaagaagacc tgcttctggg ttagggcgaa
     4861 tatctgtttc gttattgaac gcaatcttat atgagttagc tgccaaagct tcaccaaatt
     4921 ccaatggaat gaagacagat ggaattgcaa tagctgtatc atcaagttgc atgcttacgt
     4981 tggcttcacc tggacggcta ttgaaaatga ccacccctac tgcacctgca gctgttgcat
     5041 tggctatttt ttctgagaaa gtaatcgttc ctcgtttgat gagtgcaagt tttccagtca
     5101 aatctagacc atcaaaatcc gaagcttgac cgattcccgc atagacatat tcatattctt
     5161 tcccgatttc aaatggtacg ggacttttct ctggattatc aaacgaactc ttaccgtaat
     5221 tcaagtcagc attgttttct aagccaatga tattaattac tttactacca accgttgtgt
     5281 tattgtaaga agcgacagaa attgcatcgc gagctgttga aggagcaccg accaagccat
     5341 aatctggata atcggctgac ggattagaat gacctgaacc aaatgttcca tcattaccag
     5401 ctgcaataac aacagaaacc cctgcacgac gagcagcctc gattgctgca gtcacatttt
     5461 cattcatgtt aacaacagag ccgttagctc ctcccagact gaggttgatg ctatctgcac
     5521 ccaattttac agcatcttca atcgccttta cgtacaatgc tgcacctgtt gtagctttga
     5581 ggtctgagaa tacacgcata aacatgactt gcgcttcagg agctacacca tacattaatt
     5641 gtccagcgac tggttgtgtc ggatttcctg tggcaatact tgttacgtgc ataccgtgtg
     5701 aacgtttgtc ttcttctttc aagacagtat tcacatcaac atagttataa ccaaatacaa
     5761 ccttatcgtt aaaccattca ccgtaggtaa ttcctgctgc ttctttagct gcttctatct
     5821 ctttttctga tttatatttt gcagttgaga ggtctgaaat atgcaataca tcgtggtcaa
     5881 cgtcaagacc ggaatctatg attgcaacta ctgttccctc gcccttgtaa ccactatccc
     5941 aaactttagg cactgtaatg atcgtattac tatcaatgtt ttgtggtttc gcttcttcct
     6001 gattcgtaat agcagtagtc tcatctgcta cggaaagctt ctcctcttct tctacttttt
     6061 tctctgaaat aactggagtt tctacagctg gttgagttgt ctctacttct gcatttgtga
     6121 tgttttcaag agcttctgag ccaggtattt cttcttcatt atctgtagtg gttacatcag
     6181 ttggggtagc ctccacagaa gtgtcaacca actcctcgac tacgggactt tctgaggctg
     6241 attcgctgac gattgcatca ggaacagttg cttccacctt agtctctaca aggcttgtca
     6301 attcatctgc agctaccgat ggtgcacctg caaacaaaaa aactgcaccc aaaagaacag
     6361 acacagttcc aattttatac ttccgaagtg agaaagtttc tttctttttc ataacttttc
     6421 ctcctagttt ttctccttca ttattggcaa aaccaataaa tatattaaaa cataaaatta
     6481 tcggtatt
//
LOCUS       DBNFCX010000107         6473 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.107, whole genome shotgun sequence.
ACCESSION   DBNFCX010000107 DBNFCX010000000
VERSION     DBNFCX010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 6473)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6473)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6473
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.107"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(16..1395)
                     /locus_tag="AC1PJC_001947"
     CDS             complement(16..1395)
                     /locus_tag="AC1PJC_001947"
                     /inference="COORDINATES: protein motif:HMM:NF015210.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF262 domain-containing protein"
                     /protein_id="HIP6620921.1"
                     /translation="MLEGWIRIDDASNSDIDWSQSIAELDAQLYRKYGVYIMDLYYLV
                     HGHKVIEINTEELEGYKLLCGVENQDDLQIKFQELGLEIEDSVFEEIQEILGLDNGNS
                     EESIEEFRIKHWVSNRSFGELVDMYKHGEIKTPEMQRKFVWNSVKSSRLIESIILGLP
                     IPPLFLLEVDDNEYEIIDGYQRLTTLHNFIEGLPWTGSKEGKRNVTSRLSRKNIMKDI
                     KGKSFSELSEEHKTKLRRSTIPLVEFKQLSPGDFSSKYLIFERINTGSEKLNGMQIRK
                     SLAYGSFMENLYDAANSNEKYLSLFSTTQIKKDVHVEALLRILAISDINFGRFLPRRY
                     GIKNVLDEYGEHYRNTEISVTRLEMIFSYIEQLVDLFHKNHVFRRVNSEREFEGAINI
                     GILESLVGSFVESQKPIPDNFIDIYKLELNKLWDSYILEEQENPFSTSTGSLESIQKR
                     YNIFESMIG"
     gene            complement(1376..5740)
                     /locus_tag="AC1PJC_001948"
     CDS             complement(1376..5740)
                     /locus_tag="AC1PJC_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000624952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /protein_id="HIP6620922.1"
                     /translation="MISNFEFLAIDIDTAELFRTINMAEENYTHGDYEGTLTKVRKVA
                     ENTARLVADREYLDIHERATFNDVLREIRDFISNKTIVDHFYDIKGKGNNSAHVLNPE
                     DATKENALKSLKQVFDILAWVMLTYIEPDIKASAIGQFLEPRAQEMYTTAERKFIYIQ
                     TVNNESGLFNAFEGTQKIGEGSVSSDDIETDWSPNSDFLRTVAPKRINQYMKTSGLPY
                     TLGWVELAYKKATKSWFHDYDVHNVLKRSGIKQAEQLEGTEWFKTDLETAKAAIKAVK
                     EGRNYLNITAKESFIEEPVITLRPEQEAAVEQTQKVFKKKDRMLWNAKMRFGKTLTSL
                     QLVKNEAFQRVLIMTHRPVVADSWFDDFKKMKMSADGYDYGSVNQGETLENLKRGEKP
                     FVYFASIQLLRYNGGQTNLKDFADVDWDLIIIDEAHEGTQTELSDSVMKELVKEHSKI
                     LELSGTPFNLLDQFDEEQVYTWDYVMEQQAKKKWELERPSEPNPYETLPKVSMYTFEM
                     KHKERFSDESKSFNFREFFRVAEDGQLVYKQEVRQFLDNITHPDSRTNYPFSTKSYRE
                     ELRHTLWLMPGVKEANAFEGLLKEHPIFGKEYKIVNVVRGASSDDGIANDADIEKVRS
                     AIGKDPSQTKTITLTVRKLTTGVNIPEWTAVLFLSNTNSAMNYLQAAFRAQTPFSHEK
                     LGMKTNCYVFDFAPDRALTVMAESAQINSGVGKKNTQAQKQAMARLLNFMPILGASDN
                     GMKTYDVDRMLTQLKKVYAEKAVRSGFEDDSLYNDNLLTLTADDASMFTKLNAIVGKT
                     QSQKTPKKVVINENGLTTEEHEQAEKAKKKPKAKRTAEDLEVIEKQKEAKKQRKNMIS
                     ILRGVSIRIPMMIYGMAVDLSKDITIQDFIKQVDDESWKEFMPKGFTKGMFSEITKYY
                     DAEVFIEAGRIIRQRAKSFDDLDFIERAEQIAELFGTFKNPDKETVLTPWRVVNLQVS
                     KSVGGLNFYDDNFESATDGARSNLHWVSNEVTPSIYQRDTKILDINSKTGLYPLHSAI
                     SLYYQRVAENDDNHFEADQVYQEILANNIYAIAKTPMAKTITERTLTGYRKYKTNVTY
                     IESLTDTLKTDGEQGKKLVEEAFNKVKFDVVIGNPPYQNEGIGDVARDEPIYHKFMDL
                     AYEVADKAVLITPARFLFNAGQTPKAWNQKMLADEHLKVIYFSQKSDEVFPNTDIKGG
                     VAVTYRDAKENFGAIETFTPIEWLNDLLHLIRHKVKRSFNEYLFGKSSYKFSNNLYGN
                     YPELKGRVSVAEEKSISSNIFEKLPEIFLDEKQSDNQIGIYGRINNERVTKWIEADLV
                     EEHPNLDKYKVFLPASNGSGAIGEVLSTPLVGTPLVGHTQTFISFGAFDTEREAENCL
                     KYIKTDVARAMLGTLKVTQHNQSKEVWSNVPWFDFSDYSIIDWSKSVEEIERQLYDYF
                     NVPDNIIAELKVNVRRMD"
     gene            complement(5744..6439)
                     /locus_tag="AC1PJC_001949"
     CDS             complement(5744..6439)
                     /locus_tag="AC1PJC_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011681365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylase"
                     /protein_id="HIP6620923.1"
                     /translation="MEESLIKSKQRVQKHGEVFTPAWMVQKMLDTPGVKEACESVSKT
                     FLEPSAGDGNFLQAILERKLEAVVRQYDKRNWKTKSLIALSSIYGIEFLEDNLEVARS
                     RMFLCYLDWYEQVFGTRLNSKNDIYQSAHYLIHKNIVRGNTLTQQHPVTGEPIRFNEW
                     QLVKGHPSLVRKIPFALSELLGKEVEDDRKVVEGQLSFFDIDDEFVIENESVEKADVI
                     KEITIQKVYLLGD"
BASE COUNT         1853 a         1436 c         1010 g         2174 t
ORIGIN      
        1 atcaatattc atttcttacc ctatcataga ttcaaaaata ttgtatctct tctgaataga
       61 ttctaaacta ccagtacttg tagaaaacgg attctcttgc tcttcaagga tatatgagtc
      121 ccaaagttta ttcaactcta gtttataaat atcaataaaa ttatctggta ttggtttttg
      181 actctccaca aaactaccaa ccaatgactc taatataccg atattgatag ctccttcaaa
      241 ctctctttcc gaattaactc tcctaaaaac atgattctta tgaaataaat caaccaattg
      301 ctcgatatat gaaaatatca tctctaagcg agttacactt atttcagtat tacgatagtg
      361 ctccccgtac tcatctaaaa cattctttat tccgtatctt ctcggaagga atctaccaaa
      421 atttatatct gaaatcgcaa gaatacggag caaagcctca acatgtacat ctttttttat
      481 ctgtgttgtt gaaaaaaggc ttagatattt ttcattagag ttagctgcat catacaaatt
      541 ttccataaaa gaaccatagg caagtgattt acgaatttgc atcccattca atttttcaga
      601 accagtgttt attctctcaa aaattaaata ttttgaacta aagtcacctg gactaagctg
      661 tttaaattca actagcggaa ttgtacttct ccttaacttt gttttatgtt cctctgaaag
      721 ttcgctaaaa ctcttacctt taatatcctt cattatattc ttcctagaca agcgagaagt
      781 aacatttctc tttccttctt tagatccagt ccagggcaaa ccctcaataa aattatgaag
      841 cgttgtcaac cgttgataac cgtcgatgat ttcatactca ttatcgtcaa cttctagaag
      901 gaataatggc ggaataggca agcctaaaat aattgattca attagtcgag aactctttac
      961 tgaattccag acaaatttcc tctgcatctc tggcgttttt atttcaccat gtttatacat
     1021 gtcaactaac tctccaaaag atcgattact cacccagtgt tttatccgaa attcttcaat
     1081 actctcttca ctgttcccat tatctaatcc caaaatttct tgaatctctt caaacactga
     1141 gtcttcaatt tctaaaccta gttcttggaa ttttatctgt aaatcatctt gattctcaac
     1201 accacatagc agcttataac cctctagttc ttcggtattt atttctataa ctttgtgacc
     1261 gtgtactaaa taatataaat ccataatata tactccatat tttcgataga gttgtgcgtc
     1321 taactcagct attgattgtg accaatcaat gtccgaatta gacgcatcat ctattctaat
     1381 ccatccttct aacattcact ttcagttcag caataatgtt atctggcaca ttaaagtaat
     1441 cgtaaagctg tctttcaatt tcttcaacag atttcgacca gtcgataata gaataatcac
     1501 taaaatcaaa ccacggaaca ttgctccaaa cttctttaga ttgattatgt tgagtcactt
     1561 taagtgtacc taacattgcg cgagctacgt ctgttttgat atacttcaaa caattctcag
     1621 cttccctctc ggtatcaaaa gcaccaaaag aaataaaggt ttgtgtgtga cccacgagtg
     1681 gggtacccac gagtggggtc gatagaactt cgcctatcgc cccacttccg ttggaagcag
     1741 gcaaaaatac tttgtattta tccaaattag ggtgttcttc aactaaatca gcttctatcc
     1801 actttgtcac acgttcatta ttgatacgtc cgtatattcc aatttggtta tctgattgtt
     1861 tttcatctaa aaatatttca ggtagtttct caaaaatatt tgaactaatt gatttttctt
     1921 ctgctacaga aaccctaccc ttcaactctg gataattgcc atataaatta ttgctgaatt
     1981 tataactact ctttccaaat agatattcat taaatgatct tttaacctta tgacgaatta
     2041 gatgtaataa gtcatttagc cattcaatcg gtgtaaaggt ctcaatagca ccaaaatttt
     2101 ccttagcatc tcggtaagtt acagctacgc ctcccttgat gtctgtattt ggaaagactt
     2161 catcagactt ttgagagaaa taaatcactt taagatgttc atcagccaac atcttttgat
     2221 tccatgcttt cggagtttgc cccgcattaa aaagaaaacg agctggtgta atcagaactg
     2281 ccttatctgc gacttcataa gccaagtcca taaatttatg atagattggt tcatcacgag
     2341 ctacatctcc tatcccttca ttttgatacg gaggatttcc tatcactaca tcaaatttca
     2401 ccttgttaaa tgcctcctca actagtttct taccttgttc accatctgtt tttagggtat
     2461 ctgtcaggct ttctatataa gtcacattgg ttttgtactt ccgatagcct gtcagtgtac
     2521 gttcagtaat ggtttttgcc attggtgttt tggcaatagc gtagatatta ttcgctaaaa
     2581 tctcttgata gacttggtca gcttcaaaat ggttgtcatc attttctgcc actctttgat
     2641 aatacaagct aatggcgcta tgaagggggt agagacctgt cttcgagtta atgtctaaga
     2701 ttttcgtatc tcgttgatag attgatggag tcacttcatt agacacccag tgaagatttg
     2761 acctcgcacc atctgtcgcc gactcaaagt tatcatcata gaagttcaaa ccaccgacag
     2821 acttagatac ttggagattg accacgcgcc atggtgtcag taccgtttcc ttatcagggt
     2881 ttttaaaggt cccaaacagc tctgcaatct gctccgcccg ctcgatgaag tccagatcat
     2941 caaaggattt ggcacgctga cgaatgatac gacctgcttc gataaagacc tcagcatcat
     3001 aatacttggt aatctcacta aacattccct tggtgaaacc ttttggcatg aactctttcc
     3061 acgattcatc atccacctgc ttgataaagt cttgaatggt gatatctttt gataaatcga
     3121 ccgccatacc gtaaatcatc atcggaatac ggatagaaac cccacgtaaa atagaaatca
     3181 tatttttccg ctgtttcttc gcttcttttt gtttttcgat aacctctaga tcttctgctg
     3241 ttcgtttagc ttttggtttc tttttagctt tttcagcttg ctcatgctct tcagttgtca
     3301 atccattttc attaattaca actttcttag gcgttttttg actctgtgtc ttaccaacga
     3361 tagcatttag tttggtaaac atgcttgcat catcagcggt taaagttaaa agattgtcat
     3421 tatatagact gtcatcttcg aaacctgacc gcactgcctt ttcagcataa actttcttga
     3481 gctgtgtcag cattctatcc acatcgtagg tcttcattcc attgtctgaa gcccctaaga
     3541 ttggcataaa gtttagaaga cgagccatag cttgcttttg tgcttgcgta tttttcttcc
     3601 ctacacctga gttaatctgg gcactctccg ccatgacagt caaggctcta tcaggggcaa
     3661 aatcaaaaac ataacaattc gtcttcattc ctaatttctc atgagaaaaa ggcgtctggg
     3721 cacggaaagc agcttgtagg tagttcatgg cactattggt attagacaag aagagaacag
     3781 ctgtccactc tgggatattg acgcctgttg tcagcttacg aactgtcagg gtaatggttt
     3841 ttgtctgcga agggtcttta ccaatagcag aacgaacttt ctctatgtcc gcatcgttag
     3901 caattccatc atcgctactt gctcctcgaa caacattaac aattttatat tctttcccga
     3961 aaatagggtg ttctttaagc aagccctcaa aagcattagc ttccttaaca cctggcataa
     4021 gccaaagcgt atgacgcaac tcttcacgat aagacttcgt tgaaaaaggg tagttcgtac
     4081 gactatctgg atgtgtgata ttatctaaga attggcgaac ctcttgctta taaacaagtt
     4141 gaccatcctc agccacacgg aaaaattccc taaagttgaa cgatttactc tcatcagaaa
     4201 aacgttcctt atgcttcatt tcaaaagtgt acatcgatac ttttggcaaa gtttcataag
     4261 gatttggctc acttggacgt tctaattccc acttcttctt agcctgttgt tccatgacat
     4321 agtcccaagt ataaacttgt tcctcgtcaa attgatccaa aagattgaaa ggtgtcccag
     4381 atagttcaag tatcttagaa tgttccttga cgagttcttt cattaccgaa tcactaagct
     4441 ctgtctgggt tccctcgtgc gcctcatcaa tgataatcaa atcccaatcc acatccgcaa
     4501 aatctttcag attggtttga ccaccattat accgaagcaa ttggattgaa gcgaaataca
     4561 caaaaggttt ctcacctcgc ttcaggtttt caagcgtttc tccttgatta actgagccat
     4621 aatcataccc atcagcgctc atcttcattt tcttgaaatc atcaaaccaa gaatccgcca
     4681 caacaggacg atgagtcatg atgagcactc tttgaaaggc ttcattcttg accaattgca
     4741 aggacgtcaa ggttttacca aaacgcattt tagcattcca gagcattcgg tcttttttct
     4801 taaagacttt ttgcgtctgc tcgaccgctg cctcttgttc tggacgaagg gtgataactg
     4861 gttcttcaat aaatgattct ttggcagtaa tatttagata atttctacct tctttaacag
     4921 ctttaatagc agccttagct gtctctaaat ccgtcttgaa ccactctgtt ccttccagtt
     4981 gttcagcctg tttaatccct gaacgcttca agacattatg cacatcataa tcatggaacc
     5041 aggacttggt cgcctttttg taagcaagct ctacccaacc aagcgtgtaa ggcagaccag
     5101 atgttttcat gtattgatta atacgttttg gggcaaccgt acgtaaaaag tcactatttg
     5161 gtgaccaatc tgtctcaata tcatccgaag aaacactacc ctcaccaatt ttttgcgtcc
     5221 cttcaaaagc attaaatagt ccactttcat tattaactgt ttgaatatag ataaacttcc
     5281 gctcagccgt agtgtacatt tcttgtgctc tcggttctaa aaactgaccg attgcactgg
     5341 ctttaatatc cggttcaata taggtcagca tgacccaagc taatatgtca aagacttgtt
     5401 ttagtgattt taaggcattt tcttttgtcg catcttctgg attaaggaca tgggcagaat
     5461 tattcccctt tcctttgatg tcataaaagt gatcaacgat tgttttattg gaaataaagt
     5521 ctcttatctc tcttagtaca tcgttaaagg tggcacgttc atgaatatct aaatattctc
     5581 tatcggcaac caacctcgct gtattctcag caacttttct taccttagtt agcgtgcctt
     5641 catagtcccc atgtgtataa ttttcttcag ccatatttat ggttctaaaa agctcggctg
     5701 tatctatatc aattgccaaa aattcaaaat ttgaaatcat agcctaatct cctagtaaat
     5761 acactttttg aatggttatc tcttttatca catctgcttt ttcaacagat tcattctcaa
     5821 taacaaattc atcatctata tcaaaaaaac tcagttgtcc ttccacgact ttccgatcgt
     5881 cttctacttc cttacccaaa agttctgaaa gtgcaaaagg aatttttctt accaaacttg
     5941 gatgaccttt gaccagttgc cactcattga acctgatagg ctcccctgta actggatgct
     6001 gctgagtcaa ggtatttcct ctcacaatat ttttatgaat aaggtagtgt gctgattgat
     6061 agatatcatt tttgctattt agtctagttc caaaaacttg ctcgtaccag tctaaataac
     6121 aaagaaacat ccgtgaacgt gccacttcca aattatcttc taaaaactct atgccatata
     6181 tggacgagag agcaatcaaa gactttgttt tccaatttcg tttgtcatac tgtctgacca
     6241 cagcctctag ctttctctct aaaatagctt gcaaaaaatt accatcgcct gcagatggct
     6301 ctaaaaaggt cttagataca ctttcacaag cttctttcac tccaggagta tccagcattt
     6361 tctgaaccat ccaagcaggt gtaaagactt ctccatgttt ttgaacacgt tgttttgatt
     6421 taattaagct ctcttccaaa acctactcct tgaaaacgat tatatctcca cct
//
LOCUS       DBNFCX010000108         6050 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.108, whole genome shotgun sequence.
ACCESSION   DBNFCX010000108 DBNFCX010000000
VERSION     DBNFCX010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 6050)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6050)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6050
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.108"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            30..176
                     /locus_tag="AC1PJC_001950"
     CDS             30..176
                     /locus_tag="AC1PJC_001950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620924.1"
                     /translation="MLENWLNTKQGQVFHYMMERIEDALGLLGNAYLIVKIRNRLATR
                     WFVM"
     gene            382..1602
                     /locus_tag="AC1PJC_001951"
     CDS             382..1602
                     /locus_tag="AC1PJC_001951"
                     /EC_number="6.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004326 - tetrahydrofolylpolyglutamate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008841 - dihydrofolate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HIP6620925.1"
                     /translation="MLENWLNTKQGQVFHYKMEKIEYALELLGNPQFAVPVIHVAGTN
                     GKGSTIAFMRQLFQTHSLRVGSFVSPHMVSVHDRICIDSQPISDHDFQHYLQKVYDLE
                     QEVATRYEPFRYFEVMVLIMFLYFEAQQPDVALVEVGIGGLLDTTNVVAPALSIITSI
                     GMDHQDLLGSTLREIAEQKAGIIKENVPVVLGPLSPETTVICHQIAQDKQASVHQFGQ
                     EFTYKAGQFSNTDIDLSELVLSLAGHHQEENAAVALQTFLLYMTNIQKDIQPQLIQQA
                     LAQTSWPGRLELVVQEPKIYLDGAHNVPAIERLIEFIQVQDEPVTILFSALRRKDFQE
                     MLELLEEKLPHTPLALTSFAYDGALAEENRQGRDYVENYQQFIEDWQSDGHGILIVTG
                     SLYFISEVRRIFKK"
     gene            1793..3316
                     /locus_tag="AC1PJC_001952"
     CDS             1793..3316
                     /locus_tag="AC1PJC_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol oxidase"
                     /protein_id="HIP6620926.1"
                     /translation="MTELDVVSDVVTHPEETYRRSRRASRRQQVQLNGEFHERVLKTK
                     YWPALVWSLVLSVFSVANPLLMPFATNIQTQNLYAGMAMANGQIPYGDFFGTSGLLFY
                     LLAFLGHLGGTFIIFGILQFIALLIAGIYFYKIVAYFSQSEHLATSSSHWFYVFIFAL
                     GFGGMYAEMFALPFLLTSVWFLVRYFENAVRDEAFILYGIDAALVFLIYPKSLILWLV
                     AGLVLFIFNIQHRQVTRGIYQLLATIFGFLLILYAVGYYAFEAQILGTAIQQTFLYNL
                     QLDFHHSYLYLALAIVSVFLLLSGFFKSFIQMVFSFKQGRHTYIKVLLLLTFLVQCVF
                     IIGNANFQWSQLILLLPYGFTMSVVYLRDEDVEDYRGYLRRQFFLPLAICLGIIAQPA
                     YLYLVQGDLRTDREQVANYIGEQTKDSDKIYVWDNSASIYLSSQRLSAATITTAEPYL
                     NTDDNKNSLMYDVNKNEAKFVVVNKNLPILDEIKTNLESQYQSVQTTDYFTIYQKNE"
     gene            3435..5372
                     /gene="mutL"
                     /locus_tag="AC1PJC_001953"
     CDS             3435..5372
                     /gene="mutL"
                     /locus_tag="AC1PJC_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0032300 - mismatch repair complex
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HIP6620927.1"
                     /translation="MSHIIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIE
                     ISVEEAGLKMIQITDNGEGIAPDEVALALRRHATSKIKNQSDLFRIRTLGFRGEALPS
                     IASVSHMIIETATADSAHGLHLEAKGGVIEKEEPVSRPVGTQITVSDLFYNTPARLKY
                     VRSQQAELSHIVDVVNRLSLAHPEIAFALVNEGRELIRTAGTGKLRQAISGIYGIASA
                     KKMVEIEAEDLDFQISGYVSLPELTRANRNYISIFINGRYIKNFLLNRAILEGYGSKL
                     MVGRFPLAVISIEIDPYLADVNVHPTKQEVRISKEKELMTLIREAISQALKEQDLIPD
                     ALENLAQSSTRPKVKAEQGTLPLREPKIYYDTIKQDFFLKPDVVAEDVKPLEEDRQEI
                     VESPVENKPTSVQFAERQSVDSEDQEHPNLSAKELAKLADKLDREETSTFPELEYFGQ
                     MHGTYLFAQGKTGLYIIDQHAAQERVKYEYYREKIGQVDNSAQQLLVPYIFEFPQNDA
                     LDLVHKMDALRQVGVNLEEYGANQFILREHPIWMKEEEIESGIYEMCDMLLLTDQVSI
                     KQYRAELAIMMSCKRSIKANHALDDYSARDLLRQLSYCQNPYNCPHGRPVLVHFSKSD
                     MEKMFRRIQENHTSLRELGKY"
     gene            5411..6001
                     /gene="ruvA"
                     /locus_tag="AC1PJC_001954"
     CDS             5411..6001
                     /gene="ruvA"
                     /locus_tag="AC1PJC_001954"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000271492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HIP6620928.1"
                     /translation="MYDYIKGILTKITAKYIVVETQGVGYILQVANPYAYSGQVQQEV
                     TVYTHQVIREDAHLLYGFATENEKSVFLSLISVSGIGPTTALAIIAVDDNDGLVRAIE
                     QKNITYLTKFPKIGKKTAQQMILDLEGKFVMSEEAGPVQQVAPSSENIALDEAMEAME
                     ALGYRPAELKKIKKFFDGTNDTAENYIKSALKMLMK"
BASE COUNT         1806 a         1141 c         1326 g         1777 t
ORIGIN      
        1 tatacataga cagtatgtag gaggtggttg tgttagaaaa ttggttaaac accaaacaag
       61 gtcaggtgtt tcattacatg atggagagga ttgaggatgc tctagggctg ttaggtaatg
      121 catatttaat tgttaaaatt agaaatagat tggcaacaag atggtttgtt atgtgacatt
      181 tttgtcctgt tggaaaaagt tctcaagttg taaaatagtt ttatcaaata aaggagatag
      241 agcaatgatt acaattttta caaaagtttt tccatttgga gatttctcga caagctggtg
      301 gaatttttaa cattcacctt attcaaaagc caacatccgt taggcttttt tgctatacta
      361 gacaatatat aggaggtggc tatgttagaa aattggttaa acaccaaaca aggtcaggtt
      421 tttcattaca agatggaaaa gattgagtat gccctagaac tgctagggaa tccccagttt
      481 gcagttccgg tcattcatgt tgctggaacc aatggcaagg gatcgaccat tgcctttatg
      541 cgtcagctct ttcagactca cagcttgcgt gtcggtagtt ttgtatctcc ccacatggtg
      601 agtgtacacg acaggatttg tattgacagc cagcccattt cagaccatga ttttcagcac
      661 tatttacaga aagtctacga cttggagcag gaagtcgcca ctcgttatga gccctttcgt
      721 tattttgagg tcatggtgct cattatgttc ctctatttcg aagctcaaca acccgatgtg
      781 gcactagtag aggtcggcat cggaggactt ttggatacaa ccaacgtcgt ggcaccggct
      841 ctcagcatca tcacctccat cggcatggac catcaggatt tactaggctc gactttaagg
      901 gaaatagcag agcagaaagc agggattatc aaggaaaacg tgcctgtcgt ccttggacca
      961 ctttctccag aaaccacagt tatctgtcac caaattgccc aagacaaaca agcctctgtc
     1021 caccaatttg gtcaggaatt cacctacaaa gcaggacagt tcagcaatac ggacatcgac
     1081 ctgtcagaat tagttctgag tctggcaggc catcatcaag aagagaatgc ggctgtagcc
     1141 ctacaaactt ttctactcta tatgaccaat attcaaaaag acattcaacc tcagttgatt
     1201 caacaagccc ttgcccaaac cagctggcct ggtcgtttgg aattggtagt tcaagagcca
     1261 aaaatctatt tggatggagc ccacaatgtt cctgccatcg aacgcttgat tgaatttatt
     1321 caggtacaag atgaacctgt cactattctc ttttcagccc ttcggcgcaa ggactttcaa
     1381 gaaatgcttg aattattgga agaaaagtta ccgcatactc ctcttgcatt aaccagcttc
     1441 gcttatgatg gtgccttggc tgaggaaaac cgacaaggac gagattatgt tgagaattat
     1501 cagcagttta tagaagactg gcagtctgat ggacacggga ttttgattgt cacaggctct
     1561 ctctacttta tctcagaagt tcgtcggatt tttaaaaaat gaatatcttt ttgcgaataa
     1621 ataggtatga cagatgcaga aaaagtagcc tttttaaaag aatttcaaga gaacaaacgc
     1681 catacctttc gacagttaga actgtttgca aaaatttcca gaactcccga taggaaatga
     1741 catcgggagt gctttttgat ataataagga aagcaaatcc aaggagaaga aaatgacaga
     1801 attagatgta gtttcggacg tagttactca tcctgaggaa acttatcggc gtagtcgtag
     1861 agcatcacgc agacagcaag tgcaactgaa tggtgaattt catgaaagag tattaaagac
     1921 aaagtattgg ccagctcttg tttggagctt agttttaagt gtttttagcg tagccaatcc
     1981 actgctaatg ccatttgcaa ccaatataca aactcaaaat ttatatgcag ggatggcaat
     2041 ggcaaatgga caaatccctt atggtgattt ctttgggaca agcgggttat tattctactt
     2101 acttgctttc ttaggtcatc tgggagggac tttcattatc tttggaatcc tccagtttat
     2161 agcgttactg atagcgggaa tctatttcta taagattgta gcttatttta gtcagtcaga
     2221 acacctagcg acaagttcta gtcattggtt ctatgtgttt atttttgcac ttggttttgg
     2281 agggatgtat gcagaaatgt ttgctcttcc gtttcttttg actagtgtgt ggtttctggt
     2341 ccgctatttt gaaaatgcag tgcgtgatga ggcatttatc ctctacggaa tcgatgcggc
     2401 attggtattt ttaatttacc caaaaagtct gatcctttgg ttagttgcgg gtctagtttt
     2461 atttattttt aatatccaac accgccaagt tactcgagga atctatcaat tattagcgac
     2521 catttttggt tttcttctga ttctatatgc ggtaggttat tatgcttttg aggcgcagat
     2581 tctggggaca gctattcaac aaactttcct ttataactta cagttagact ttcaccattc
     2641 ctatctatat ttagccttgg cgattgtgtc tgtattttta ctcttatctg gattctttaa
     2701 aagtttcatc caaatggtgt tttctttcaa acaaggaaga catacctata tcaaagttct
     2761 cctattattg actttcttag ttcaatgtgt ctttattatt gggaatgcta attttcaatg
     2821 gagccaactc attcttcttt taccgtatgg ttttacgatg tcagtcgttt acctgcgtga
     2881 tgaggatgta gaagattatc gtgggtattt gcgtcgtcaa ttctttcttc cgttagctat
     2941 ttgcttgggt attatcgctc aacctgctta tctttatttg gtacagggag atttgagaac
     3001 tgaccgtgaa caagttgcca attacatcgg tgaacaaacg aaagattcag ataagattta
     3061 tgtttgggat aatagcgcaa gcatctatct ttcaagtcaa cgtttatctg ccgcaacgat
     3121 tactacagca gaaccctatc tgaatactga cgacaataaa aatagcttga tgtatgacgt
     3181 caataaaaat gaggcaaaat ttgtagtcgt caataagaat ttgccaattc tagatgaaat
     3241 caagacaaat ttagaatcgc agtaccagtc tgttcagaca acggattact ttacgattta
     3301 tcaaaagaat gaatgattgc tcaggcagtc attttttctt tagcctatct gggaaaagga
     3361 gtgaaagtgg atatgtggta taatggaaaa ataagtattc gggaaaaatt attaaagaaa
     3421 tagtaggaga aatgatgtca catattattg aactaccaga aatactagcc aaccagattg
     3481 cggctggtga ggtcattgag cgaccagcca gtgtggttaa ggagttggtg gaaaattcca
     3541 ttgacgcagg ggctagtcag attgaaatta gtgttgaaga ggctggcctt aaaatgattc
     3601 aaattacgga taacggtgag gggattgccc ctgatgaagt agcgcttgct ctccgccgtc
     3661 atgccaccag taagataaaa aatcaatcgg atttgtttcg tattcgcacc ctcggttttc
     3721 gtggagaagc tctgccttcc attgcttctg tcagtcatat gatcattgag acagctacgg
     3781 cagactctgc acacggactt catttggagg ccaaaggtgg tgtcatcgag aaagaggagc
     3841 cagttagtcg tccagttggc acacagatta ctgtttcgga tttattttac aatacccctg
     3901 ctcgtctcaa atacgttcgc agtcaacagg ctgaattatc acatattgtt gatgttgtga
     3961 atcgattgag cctagctcat ccggaaatag cctttgcctt agtaaacgaa gggcgagaat
     4021 taattagaac tgcagggaca gggaaacttc gtcaggcaat ttcagggatt tatgggattg
     4081 cttccgccaa aaaaatggtt gaaattgagg cagaagatct ggattttcag atttcaggtt
     4141 acgtttcctt gccagagttg actcgtgcca accgcaacta catttccatt ttcatcaacg
     4201 gtcgttatat caagaatttt ttgctgaatc gagcgatttt ggaaggttac ggcagtaagt
     4261 tgatggttgg acgctttccg ttggcagtca tttctataga aattgacccc tatcttgctg
     4321 atgtcaatgt gcatccgacc aagcaggaag ttcgcatctc caaggaaaaa gaactcatga
     4381 ccttgattcg agaggcgatt agtcaagcgc ttaaagagca ggatttgata ccagatgctc
     4441 ttgagaattt agctcagtca agtactcgac caaaagtaaa agcagagcaa ggcaccttac
     4501 cactcagaga gccaaaaatc tattatgata cgattaagca agacttcttc ttaaaaccag
     4561 atgttgtcgc tgaggatgtc aaacctctcg aagaggatcg gcaagagatt gttgagtcac
     4621 ctgtcgaaaa taaacctaca tctgttcaat ttgcagaacg tcagtcggtg gattcagaag
     4681 atcaggagca tcctaatcta agcgcaaaag aattggcaaa actggcagat aaattagacc
     4741 gagaggaaac atcgacattt ccagagttag aatattttgg tcaaatgcat gggacgtatt
     4801 tatttgcgca aggtaagaca ggactttata tcattgacca gcatgccgca caagagaggg
     4861 tcaaatacga atactaccgt gagaaaattg gacaggttga caattcagct caacagttat
     4921 tggtgccgta tatttttgaa tttccgcaga atgatgccct tgaccttgtc cacaaaatgg
     4981 atgcccttcg tcaagttggt gtcaacttgg aagaatatgg agctaatcaa tttattctgc
     5041 gtgaacatcc tatttggatg aaggaagagg agattgagtc tggcatttat gagatgtgcg
     5101 acatgttgct cttgacggat caggtgtcaa tcaagcagta tcgggcagaa ctggctatca
     5161 tgatgtcttg taaacggtca atcaaggcca accatgcttt ggatgattat tcggcgcgtg
     5221 atttattgag acaattgtct tactgccaaa atccctataa ctgcccgcac ggtcgtccag
     5281 ttttagtaca ttttagcaag tcagatatgg aaaagatgtt ccgtcgcatt caggaaaatc
     5341 acacgagttt gcgagaattg ggcaagtatt aacatagttg aaaaagttga cacattagta
     5401 aaggaagtat atgtacgact atattaaagg aattttaaca aaaataactg caaaatacat
     5461 tgtggtagaa acgcaaggag taggctatat cttgcaggtt gctaatccct acgcctattc
     5521 aggacaagtc cagcaagaag tgactgtcta tactcatcaa gtgattcgag aagatgctca
     5581 tttgctctat ggatttgcta cagaaaatga aaaatccgtc tttctgagtc tgatttcagt
     5641 atcaggtatt ggtccaacaa cagctctggc tattattgct gttgatgata atgatggact
     5701 tgttcgtgct attgagcaga agaacattac ctacctgacc aagtttccaa agattggcaa
     5761 gaaaacagcc cagcagatga ttttggactt ggaaggcaag tttgtcatga gcgaagaagc
     5821 gggtcctgtt caacaagtag caccatccag tgaaaatatc gctcttgatg aagctatgga
     5881 agccatggaa gcccttggtt accgtccagc tgaactcaag aaaatcaaga aattcttcga
     5941 cggcaccaac gacaccgcag aaaactacat caagtcagcc cttaaaatgc tgatgaagta
     6001 ataagataca aaggacgtaa aggacaaaga gaaaatagac ggccgaacag
//
LOCUS       DBNFCX010000109         6031 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.109, whole genome shotgun sequence.
ACCESSION   DBNFCX010000109 DBNFCX010000000
VERSION     DBNFCX010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 6031)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6031)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6031
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.109"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(162..512)
                     /locus_tag="AC1PJC_001955"
     CDS             complement(162..512)
                     /locus_tag="AC1PJC_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620929.1"
                     /translation="MMFNFHRMSEEEKLQAQIRKEQERMVLYAVNHYEEIEKIEFTSF
                     EENKMTGSWSAGATINNEYLVTFKAFGFAGDLGMNQSGSKITGGHLIKKAVQTDISNI
                     GHVEVIYLEGDELW"
     gene            complement(701..1642)
                     /gene="msrB"
                     /locus_tag="AC1PJC_001956"
     CDS             complement(701..1642)
                     /gene="msrB"
                     /locus_tag="AC1PJC_001956"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HIP6620930.1"
                     /translation="MKEIYLAGGCFWGMEGYFSQIDGIIDTSVGYANGQVETTNYQLL
                     KQTDHAETLYLAYDEDRINLREILLYYFRVIDPFSVNQQGPDKGRQYRTGIYYTDEAD
                     LPTIEQVMTEQSQHFGGRPLAVEVEPLAHYIPAEDYHQDYLKKNPQGYCHIDLGQAKI
                     PLIDVADYQKPDQQVLKDSLTDLQYQVTQEAATERPFENEFWNSDQAGIYVDITTGEP
                     LFLSTDKFDSGCGWPSFTKPISKEVATYFQDKSHGMNRIEVRSRAGHAHLGHVFDDGP
                     RDKGGLRYCINSAALRFIPREEMEEAGYGLFLGLLSE"
     gene            complement(1682..3211)
                     /locus_tag="AC1PJC_001957"
     CDS             complement(1682..3211)
                     /locus_tag="AC1PJC_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HIP6620931.1"
                     /translation="MPTISYKPLNLYRQFKTAAQEFPNVAIYFDQPYASFPELGLENT
                     YQTVFEAIQKRAAQFAAAGIGYGDKVILYKSPAFDTYLLAVAVTALGAVPVMISYHLP
                     SSNLDVFAERLEKSFIVYDQETEERVAGMTRTDLVTKIFLPQVLVQEAVAFEENLLPE
                     DVIQYMTHTSGTTGVPKLICHTAQTMGWRVAWQQTIFDKMTERGLLAFHISPVHSRYN
                     IGVSSAIGLGFPLYPLSSARKDDVERALALHRPSALETHPNNFVQWARLAKEKPEVFS
                     SIRYYHSTFDAINIGTLRAFLEASKEQDPVFMQVYGQSECGPMILRYHRLENLGTVSG
                     RDMGIGLEGYTEARITDAQGNPLPAGENGHIQFLSKGRAVTYYKEDARFQDNVYGAWW
                     DSGDYGCMTPEGTLLLKDRQVDLIEHIDSNLALEDLLLDKLDFLSEVVIIRDVNGAPQ
                     PIIALAEDAEMNWEAWWAMVADLPLLKEPILMAYDDIPRTATMKVQRLKMEAEMKEKN
                     L"
     gene            complement(3479..3793)
                     /gene="trxA"
                     /locus_tag="AC1PJC_001958"
     CDS             complement(3479..3793)
                     /gene="trxA"
                     /locus_tag="AC1PJC_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HIP6620932.1"
                     /translation="MVQVITDANFEVETQEGVVLVDFWAPWCGPCRMQAPILEQLADE
                     VDEDELRIYKMDVDENPNTARQFGIMSIPTLLFKKDGQVVKQVAGVHTKDQIKAILAE
                     IG"
     gene            complement(4035..4355)
                     /locus_tag="AC1PJC_001959"
     CDS             complement(4035..4355)
                     /locus_tag="AC1PJC_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620933.1"
                     /translation="MHQLYQMLQDLYTKADQIDYATINAIEKEIERWLIRSIYAPLKL
                     REKNAILKQHKKKVQTIGNDGENSVKLIANSFDTSIKGEFSKKVQQVVKEKAKEYTKL
                     EEVE"
     gene            complement(4368..4754)
                     /locus_tag="AC1PJC_001960"
     CDS             complement(4368..4754)
                     /locus_tag="AC1PJC_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620934.1"
                     /translation="MDQYDKLKAELMKKEWEWEDIENQQRKAQKELQEHYENVEETTR
                     ILTRMLEEKYQEVLFELRQVGDEIGDLHQLLNNGMSEWHTAIDQERYSSIHRLDQKQE
                     DLDTYYKNQYRKMQDQIDEIYTKYRE"
     gene            complement(4733..5995)
                     /locus_tag="AC1PJC_001961"
     CDS             complement(4733..5995)
                     /locus_tag="AC1PJC_001961"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipase family alpha/beta hydrolase"
                     /protein_id="HIP6620935.1"
                     /translation="MVKKYIDDLSLQTAMTEYNSSMVKGNEVQDQYDRSIGYVTLDFD
                     NENGNGEQVYAVVKDPNLPKDQVLEVTVLFRGSTGPNEVLSKPADVWNDWVENDLFLG
                     LRVFAQDHPNYTQNHDHASGQLKASSEALNTIMATYPNAKVNLYGHSLGSMDVQYAIA
                     NLSDTDINRLESAYIYNGPNIYGILDDQQKARVDSVKGLIHNYADPKDPVSMVGRDLD
                     KGSLDSVGMVHFVESKDIDLGNQHMTYGYQLDSSDNIKVLQTSSTEGVNAIIIEMSRF
                     QQMKQTLSRGGFSSRETIYLDSEQARILAQGLVKVAETTHQTLEKETTSTLTEVNEVY
                     SSLGNVPFGFILSPDEVRQAYSSAGVDYHSLVGDSTNQVEKFITRSNQLKQDLVDLES
                     QIQAGIEQKVTEDQTLAQRIQEWTSTIN"
BASE COUNT         1595 a         1360 c         1188 g         1888 t
ORIGIN      
        1 accgccatgg cctgcatacc gttgatcata tcttggggct gggagaggat gacgaatttt
       61 ttatcagcta ccacttcccc cttgaacaga agggtcatcg actttcttta gggcatcgac
      121 accgtacaca tcctctgcta accatcgata atcttgatct gttaccataa ttcatccccc
      181 tcaaggtaaa tcacttcaac atgaccaata tttgaaatat ctgtctgtac cgccttttta
      241 atcaagtgac cacctgtaat tttagatcca ctttggttca ttcccaagtc cccagcaaat
      301 ccaaaagctt taaaagttac taggtattca ttatttattg tagcacctgc agaccaagat
      361 cctgtcatct tattttcttc aaagctggta aactctatct tctcaatctc ctcatagtga
      421 ttgacggcgt acaaaaccat acgctcttgt tcctttcgga tttgagcctg caacttctct
      481 tcctcactca tgcggtgaaa attaaacatc atcattcctc ctattgacag gaacaacaaa
      541 ctggtgaata aaactagtcg ttttttgcat acaaacataa aaatcctcct aatataatta
      601 tattattttt gaacataact tttcaaataa aaaggataat aaagagctta agttcaatac
      661 cttaagctct ttaatctatt tgctttgaag tgtttccctg ttattctgac agcaacccca
      721 aaaacaggcc atatcctgct tcttccattt cctctctcgg tatgaaacga agggctgctg
      781 agttgataca gtaacggaga ccccccttgt cacgtggtcc gtcatcaaag acatgaccta
      841 aatgagcatg accagcccga ctgcggactt caatacggtt catgccgtgg gacttatctt
      901 ggaaataagt cgccacttcc ttactgattg gtttggtaaa ggagggccag ccgcagcctg
      961 aatcgaattt gtccgtcgag agaaagaggg gctcaccagt cgtaatatcg acgtagatgc
     1021 cagcttggtc gctattccaa aactcatttt cgaagggtct ttccgtcgca gcttcttgag
     1081 tgacttgata ctggaggtcg gtcaagctgt cttttaagac ttgctggtct ggcttttggt
     1141 agtctgcaac atcaatcaga gggatttttg cctgcccaag atcgatatgg cagtaccctt
     1201 ggggattttt cttgagataa tcctgatggt agtcttcggc gggaatgtaa tgtgcgagtg
     1261 gctccacttc aacagctagg gggcgtccac caaagtgctg ggactgctcc gtcatgactt
     1321 gctcgatggt cggcaaatct gcctcatctg tgtaatagat accagtccga tactggcgac
     1381 ctttgtcagg tccctgctga ttgacagaga agggatcaat gacgcggaaa tagtagagga
     1441 ggatttcccg caaattgata cgatcctcgt cataggctag ataaagcgtc tctgcatggt
     1501 ctgtttgttt gaggagttga taattggtcg tctccacctg tccattggca tagccaacgc
     1561 tggtgtctat aatgccatca atctgggaaa agtagccttc cattccccag aaacaaccgc
     1621 ctgctaggta gatttctttc atgtgaactc cttcttatct gcaagcgtgg tttcgtcacc
     1681 cttacagatt tttttctttc atttctgctt ccattttgag gcgttgaacc ttcatggtcg
     1741 cagttcgtgg aatgtcgtca taagccatca agataggctc tttcaatagt ggtaggtctg
     1801 caaccatggc ccaccaagct tcccagttca tctcagcatc ttctgccagg gcgataatcg
     1861 gctgcggtgc accattgaca tcgcggataa tcacgacttc tgataaaaag tccaatttat
     1921 ccaacaatag gtcttccaag gcaaggttgc tgtcgatgtg ctcaatgagg tcaacctgac
     1981 ggtcttttag aagaagcgtt ccctctggag tcatgcagcc gtagtcacca ctatcccacc
     2041 aagcaccgta cacattatct tggaagcggg catcttcttt gtagtaagtc acagcacgac
     2101 cttttgacag gaactggata tgcccgtttt ctccagctgg gagaggattc ccttgggcat
     2161 ctgtgatacg tgcttctgtg taaccttcca gaccaatccc catatctcgt ccgctaactg
     2221 ttcctaggtt ttccaagcga tggtaacgta aaatcattgg accacattca ctttgaccat
     2281 aaacctgcat aaagactgga tcttgctctt tagaagcctc caagaaggcg cgaagcgtac
     2341 caatattgat agcatcaaag gtcgaatggt aataacgaat gctgctaaag acctctggtt
     2401 tttccttggc caatcttgcc cattggacaa agttattcgg atgggtttcc agagcacttg
     2461 gacgatgaag agcaagcgcc cgttcaacat catcttttct tgcagaagaa agcgggtaga
     2521 gggggaatcc tagtccaatc gccgacgaca cgccgatatt atagcgcgaa tgaacagggg
     2581 agatatggaa ggccagcaag cctctctccg tcatcttgtc aaaaatagtt tgttgccaag
     2641 ctactcgcca gcccatggtc tgtgctgtgt ggcagattaa ttttggaaca cctgtcgtcc
     2701 ctgaagtatg agtcatatat tgaataacat cttctggcag gagattttct tcaaaagcaa
     2761 ctgcttcttg cactaggact tggggtaaaa atatctttgt gaccaggtca gttcgagtca
     2821 ttcctgctac acgttcttcc gtttcttggt cgtagacaat gaaagacttt tccaatcgct
     2881 ccgcaaacac atctaaattc gaagatggca aatggtagga aatcataaca ggaacagcac
     2941 ccaatgccgt taccgctact gctaacaaat aggtatcaaa ggctggactc ttatatagaa
     3001 ttaccttgtc cccatagcca atacctgctg ctgcaaattg agcagctctt ttttgaatag
     3061 cctcaaaaac tgtttgataa gtattttcca atcctaattc agggaaggat gcgtagggtt
     3121 ggtcaaaata aatggcaaca tttggaaact cttgagctgc tgttttaaac tgacgataga
     3181 gatttaatgg tttgtaacta atagttggca tatctaacct ttctaaaatg acaataataa
     3241 ggttattata acatcttgtg ccaaccttca caatcttata tcttagcaaa tatcgtcatt
     3301 aagtttttct tttattactt caacgagcga ggaaatatcg tttctatatt tccaacctcc
     3361 aactatctcc cagatagttg gagcaaatac taaaagacta tattagaaaa taatcacaaa
     3421 agtaagtctg attataaaaa aagcaagtag tcgatccacc acttgctttc attttcaatt
     3481 aaccaatctc tgccaaaata gctttgattt gatctttcgt gtggacacca gcaacttgtt
     3541 tcacaacctg tccatctttt ttgaacaaaa gagttgggat agacatgatt ccaaactgac
     3601 gagctgtgtt tggattctca tcaacatcca tcttgtaaat acgcaattca tcttcgtcca
     3661 cttcgtctgc caattgctcc aaaattggtg cttgcatacg acaaggacca caccatggtg
     3721 cccaaaaatc tacaaggact acgccttctt gtgtttcaac ttcaaagttt gcatctgtaa
     3781 taacttgaac cataattttc tccgtttctg tttttctact atcattctac accaaaaaaa
     3841 aacagaaagc gaatttttgc tacgggatga agcatgagat aaacgtacct ataaaaattt
     3901 cagttgtaaa aaaaaatggg tatagctaaa ctagaccgca ggaggacgag ggggaactgg
     3961 gagactgttc tttctatcaa atccagtttt agcaatggga aaagatttac gaaagaatgc
     4021 tacgggatga gatattactc tacctcttcc aattttgtat attcttttgc cttttctttc
     4081 acaacttgtt gtaccttttt tgaaaactcg ccttttatac ttgtatcaaa actgtttgca
     4141 atcaatttta cggaattttc tccatcattt ccaattgttt gaactttctt cttgtgttgt
     4201 tttaaaattg catttttttc tcgcagtttg agtggagcat agatagagcg aatcagccaa
     4261 cgttcaattt ctttctctat agcattaatc gtcgcgtagt ctatctggtc agctttggta
     4321 tataaatctt gcaacatttg ataaagttga tgcattggct ctcccttcta ttctcgatat
     4381 tttgtataaa tttcgtcaat ctgatcttgc atttttcggt actggttttt atagtaggta
     4441 tccaagtcct cttgcttctg atccaatcgg tgaatggagc tgtatcgctc ttgatcgatt
     4501 gcggtatgcc attcggacat gccattgttg agtaactggt gcaagtctcc tatctcgtct
     4561 ccgacttgtc gcaattcaaa cagaacttct tgatactttt cttccaacat tcgagtcaat
     4621 attcgagtgg tttcttcaac attttcatag tgttcttgta gttctttttg agcttttcgt
     4681 tgttgattct caatatcctc ccattcccac tctttcttca ttaactctgc ctttaattta
     4741 tcgtactggt ccattcttgt atcctctgtg ctaatgtctg gtcttccgtt actttctgct
     4801 cgatccctgc ttggatttga ctttctaaat ccactaaatc ctgcttaagt tgattggagc
     4861 gagtgataaa cttctcgact tgattggtgc tatctcctac cagactatga tagtcaacac
     4921 ctgcactgct gtaggcctgt ctcacttcat caggactcaa aatgaagcca aaagggacat
     4981 ttcctaagct actgtagact tcatttactt ctgtaagggt ggaagtggtc tctttttcga
     5041 gtgtttggtg agtagtttcc gcaaccttaa ccagtccttg agccaggatg cgggcttgtt
     5101 cgctgtccag atagatggtt tcacgcgaac tgaagccacc acgggatagg gtttgtttca
     5161 tctgttggaa acgactcatt tcaatgatga tcgcatttac cccctcagtg gaagaagtct
     5221 gtaggacctt aatattgtca gaagagtcta actgatagcc ataggtcatg tgctgattgc
     5281 caagatcgat atccttactt tccacgaagt ggaccatccc aacggaatct aaacttcctt
     5341 tgtctaggtc acgcccaacc atactgacag ggtctttggg atctgcataa ttatgaatca
     5401 gccctttgac ggagtcgacc cgtgctttct gttggtcgtc taggatgccg tatatattag
     5461 gcccgttata gatatacgcg ctctctaaac ggttaatgtc ggtgtcagat aaattagcaa
     5521 tggcgtactg gacatccatc gaacctaggg agtggccgta cagattgact tttgcatttg
     5581 ggtaggtagc cattattgta tttagagctt ccgaagatgc ttttaattgt ccactcgcat
     5641 ggtcatggtt ctgggtatag ttcggatgat cttgggcaaa gacgcgcaaa cctaaaaaaa
     5701 gatcgttttc aacccagtca ttccacacat ctgcaggttt tgacaacact tcatttggtc
     5761 cagtcgagcc tcgaaagaga accgtaactt ccaacacttg gtctttgggc aaatttggat
     5821 ctttcacgac agcataaacc tgttcaccat tgccattctc attgtcgaag tcaagggtga
     5881 cataaccaat acttcgatcg tattgatctt ggacttcatt acctttaacc atactagagt
     5941 tatattcagt catagcggtt tggagactga gatcatctat atatttttta accatttttc
     6001 tttattccat ttctagtaga tgattaaatt t
//
LOCUS       DBNFCX010000110         5424 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.110, whole genome shotgun sequence.
ACCESSION   DBNFCX010000110 DBNFCX010000000
VERSION     DBNFCX010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 5424)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5424)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5424
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.110"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(148..618)
                     /locus_tag="AC1PJC_001962"
     CDS             complement(148..618)
                     /locus_tag="AC1PJC_001962"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620936.1"
                     /translation="MSNHVENKKDVNLIVAYKLGDRYNGEILARSVLYAHYFHAINNG
                     DKVLFTVKTENVTKVGKKKQLGQLIMTLGDFSDCSIADINDFDEFQNNMPNSSYQNSS
                     QFNTNQEIIANHTWFELSNLKWLTTSNLAQFKNVNTGKDFTESLSGQSCRIYVL"
     gene            complement(644..910)
                     /locus_tag="AC1PJC_001963"
     CDS             complement(644..910)
                     /locus_tag="AC1PJC_001963"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620937.1"
                     /translation="MTKKKQLTGLVLATGLAVFGSEVQADEIVTATSPAEVEAVSSTT
                     SSQPVTAQDVADAQAVVDEASQVAQAIDTAVATTKQDWVCLGWQ"
     gene            complement(1077..2066)
                     /gene="dhaQ"
                     /locus_tag="AC1PJC_001964"
     CDS             complement(1077..2066)
                     /gene="dhaQ"
                     /locus_tag="AC1PJC_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004371 - glycerone kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DhaKLM operon coactivator DhaQ"
                     /protein_id="HIP6620938.1"
                     /translation="MVFIRNRQATIIEDYLDGFCRTNPKVKKVKGLPIVLQKVQDDHL
                     VPIISGGGSGHEPAHIGFVGKGMLTAAVYGEIFTPPTAEEVLAAIRAVDKGKGVFLIV
                     KNFEADLVSFRKAIELARQEGIAVKYIVSHDDISVDTKNNFRMRHRGLAGTILLHKIL
                     GAAALTGYSLDELEQLGLSLATEIATIGFATKSAYLPNAALPLFDLEEGQISYGIGIH
                     GEEGYRTVRFESSEQLANEIVNKLKLKFRWKEGEDYILLVNNLGSMSEVEQGIFLNDI
                     CQFLELEGLQLSFIKTGKFMTSLDMGGISVTLCRVKDQKWLDFLEAPTEAAAW"
     gene            complement(2077..2622)
                     /gene="dhaS"
                     /locus_tag="AC1PJC_001965"
     CDS             complement(2077..2622)
                     /gene="dhaS"
                     /locus_tag="AC1PJC_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase transcriptional
                     activator DhaS"
                     /protein_id="HIP6620939.1"
                     /translation="MPTSLITKKRIAKAFKKQLSQKSFDKVSVVDIMQEAGIRRQTFY
                     NYFLDKYELLDWIFETELQEQVTDNLTYISGIKLLDELLYYIESNQSFYRQLFEIKGQ
                     NDFVSYLEGYFMVLMEKIINEYQLQEDKMISQQDKHFLILYHANAWIGLIKEGLTQSP
                     CQIHGYWKQMVALVRESFLIL"
     gene            2768..3757
                     /gene="dhaK"
                     /locus_tag="AC1PJC_001966"
     CDS             2768..3757
                     /gene="dhaK"
                     /locus_tag="AC1PJC_001966"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003049938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004371 - glycerone kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HIP6620940.1"
                     /translation="MKKIINQPEHVVDEMLKGLVFMHQDLVDRIDGFEVIIRKAEKTG
                     KVGIISGGGSGHEPSHAGFVGKGMLSAAVCGAVFTSPTPDQILEAIKAADEGAGVFMV
                     IKNYSGDIMNFEMAQELAEMEGIEVASVVVDDDIAVENSLYTQGRRGVAGTILVHKIL
                     GHAATTGKSLAEIKELADRLVPQIKTIGLALLGATVPEVGKPGFVLEEDEFEYGVGIH
                     GEPGYKKEKLQPSAKLAEELVEKLAEGFDIQDGEHYGVLINGLGATPLMEQYVFANDV
                     AQLLAKKGVVVDYKKIGNYMTSIDMAGLSLTLIKLEDPSWIDALQAPVEVVAW"
     gene            3768..4343
                     /gene="dhaL"
                     /locus_tag="AC1PJC_001967"
     CDS             3768..4343
                     /gene="dhaL"
                     /locus_tag="AC1PJC_001967"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047324 - phosphoenolpyruvate-glycerone
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaL"
                     /protein_id="HIP6620941.1"
                     /translation="MDAKKALLWMETFNKKIQENKDYLSELDSPIGDGDHGGNMARGM
                     AAVMQELSEKDYETADQVFKVVAMQLLSKVGGASGPLYGSAFMGITKASQAGADLADT
                     LQAGLEMIQKRGKAELGEKTMVDVWIPVIAALRESQLTTEIIHKAVQGTKDIAATKGR
                     ASYVGERSTGHIDPGSFSSGLLFEAMLEAGL"
     gene            4340..4714
                     /gene="dhaM"
                     /locus_tag="AC1PJC_001968"
     CDS             4340..4714
                     /gene="dhaM"
                     /locus_tag="AC1PJC_001968"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002960428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047324 - phosphoenolpyruvate-glycerone
                     phosphotransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase phosphoryl donor subunit
                     DhaM"
                     /protein_id="HIP6620942.1"
                     /translation="MTKVGILLVSHSKNLAQGIIDLVSEVAKDIPITYCGGLEDGSIG
                     TSFEIVQERVDANPADTLLAFFDLGSARMNMELAADFTDKQILIQTVPVVEGCYTAAA
                     LLQAGADLETILEQLKELTINK"
     gene            4724..>5424
                     /locus_tag="AC1PJC_001969"
     CDS             4724..>5424
                     /locus_tag="AC1PJC_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003062665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MIP/aquaporin family protein"
                     /protein_id="HIP6620943.1"
                     /translation="MNLIGELLGTFILVLLGNGVVASCILSKTKAENSGWLTIVLGWG
                     IAVTIAVYVSGIFGPAHLNPAVTIAMASIGSLPWAQVPGFLLAQFAGAMLASIVLYLH
                     FYPHWQETKDSGTILAAFSTGPALRHTASNLLGEALGTAVLVMGILAIGPNNVSAGLG
                     PIIVGLIVFAIGFSLGSTTGYAVNPARDLGPRIMHAILPIPNKGDSDWSYSWIPVVGP
                     ILGGVAGAILYNLLL"
BASE COUNT         1502 a         1273 c         1117 g         1532 t
ORIGIN      
        1 gagagccacc gtcttcactt ttctactaaa taattatacc ataaacttga taaaaatatg
       61 aacacagaac aaaatcctca gagtgctttc tgaggatttt gtttatttat attgtgagct
      121 ttccaatacc tactttttcc agcgtactta cagaacataa atacgacaag attgacctga
      181 taagctttct gtaaaatctt tacctgtgtt cacatttttg aattgtgcca agtttgaagt
      241 agtaagccat ttgagattac ttagttcaaa ccaagtatgg ttagctataa tttcttggtt
      301 cgtgttaaat tgtgatgaat tttggtagct agagtttggc atattgttct gaaactcatc
      361 gaagtcatta atatccgcaa tggagcagtc tgaaaaatct cctagtgtca tgatgagttg
      421 cccgagttgt ttctttttac ctacctttgt cacattttca gtcttcactg taaacaagac
      481 cttatctcca ttatttattg catgaaaata gtgggcatac aatacacttc tagcaagtat
      541 ttcaccattg tagcggtctc ccaatttata ggccacaatt agatttacat cctttttatt
      601 ttctacgtga ttactcatcc ctactctcct ttccgtctca ctcctactgc caacccaagc
      661 atacccaatc ctgcttcgtt gtcgccactg ctgtatcaat agcttgtgct acttgactgg
      721 cttcatcaac cactgcctga gcatctgcca catcctgagc agtgaccggt tggctactgg
      781 tcgtcgaact gacagcttcc acctctgctg gactagtggc tgtgacgatt tcgtctgctt
      841 ggacttcgct tccaaaaaca gccaaacctg tcgcaaggac gagtccggtc aattgttttt
      901 tctttgtcat cttatcatcc ttctgaatcg ttttatgaca aactttttgt ttatcagtgc
      961 cattctcctc cctgaccatt tttgtcaagg tattttgtct agaaaataga aaaagttgca
     1021 tgtaaaagcc tctatgggga aatccctaga ggtggatatt ccatgaaaag agtagcctac
     1081 caagccgcag cttctgtcgg tgcttctaaa aagtccagcc atttttgatc cttgacacga
     1141 cagagggtga cagaaattcc tcccatatca agactggtca taaatttacc tgtttttata
     1201 aaggaaagct gtaaaccttc tagctctaga aattggcaaa tgtcattcaa aaagattcct
     1261 tgctcaacct cagacataga tccaagatta ttgaccagaa gaatatagtc ttccccctcc
     1321 ttccagcgga attttaattt taatttgttc acaatttcgt tggctaactg ctcagaggat
     1381 tcaaaacgaa cggtccgata gccttcttct ccatggatac cgatgccgta agatatttgt
     1441 ccctcctcca aatcaaacaa aggcagggca gcattgggca aataggccga cttggttgca
     1501 aaaccgatgg tcgcaatctc tgttgccaga gacagtccca gctgttccaa ttcatccaag
     1561 ctatagccag taagggcagc agctcctaat atcttatgaa gtagaatggt ccctgcaagc
     1621 cccctatgcc gcatacggaa attattctta gtatcgaccg aaatatcgtc atgggatacg
     1681 atgtacttga ctgcaattcc ctcctgccga gccaattcga tggcttttct aaaagagaca
     1741 aggtctgcct caaagttttt tacaatcaga aaaactccct tgcccttatc tactgcacga
     1801 atggctgcca atacttcttc agcggttggg ggcgtaaata tttcaccata tactgcagca
     1861 gtcagcattc ctttaccgac aaatccaata tgtgccggtt cgtgccccga tccaccacct
     1921 gaaataattg gaactaaatg gtcatcctgc actttctgaa gcacaatcgg aagccccttc
     1981 actttcttca ctttaggatt agttcgacag aaaccatcca aataatcttc aataattgtt
     2041 gcctgtctat ttctaataaa caccatacat taactcctac aaaatcaaaa acgactcgcg
     2101 aacaagagcc accatttgtt tccaataacc gtgaatctga caaggcgact gcgttagtcc
     2161 ttcctttatc agtccaatcc aagcattagc atgatagaga atcaaaaaat gcttatcctg
     2221 ttgggaaatc attttatcct cctggagctg gtactcgttg ataattttct ccatcaaaac
     2281 cataaagtag ccttctaaat agctgacaaa atcattttgc cccttaatct caaagagttg
     2341 cctatagaaa gattggttac tctcgatgta gtacaagagc tcatccagaa gcttgattcc
     2401 actaatatag gtcagattgt cagttacctg ctcctgcaat tctgtttcaa atatccagtc
     2461 cagtaactca tacttgtcta aaaaatagtt gtaaaaggtt tgacgacgaa tccctgcttc
     2521 ctgcatgatg tcgacaactg agactttatc aaaggatttt tgggatagct gttttttaaa
     2581 agcctttgca atccttttct ttgtaatcaa cgaggttggc atatgtcact tcctttcgct
     2641 tcctctttat tataccctat catgcttttc tttggaacaa aagggacaca ttggacaatc
     2701 tgtcccttcc ttttttcttt cggacaatgt aaaatgaaaa cgcaaacaaa aacaaaggag
     2761 ttttctcatg aaaaaaatta tcaatcaacc cgaacatgtc gttgatgaaa tgttaaaagg
     2821 acttgtcttt atgcaccaag atcttgtcga tcgtatcgat ggatttgaag tgattatccg
     2881 caaggctgaa aaaactggta aggtcggcat catctcagga ggtggctctg gtcacgaacc
     2941 ttctcatgca ggctttgtcg gcaagggcat gttgtccgcc gctgtatgtg gcgcagtatt
     3001 tacctcacca acaccagacc aaatcttgga agccatcaag gctgctgacg agggagctgg
     3061 cgtctttatg gtcatcaaaa actactccgg cgacatcatg aactttgaga tggcgcaaga
     3121 attggcggaa atggagggca tcgaagtagc cagtgtcgtt gtggacgatg acatcgctgt
     3181 ggaaaatagc ctctataccc aaggccgtcg tggggtagca ggtaccatcc ttgtccacaa
     3241 gattctcggt cacgctgcaa caactggcaa atccctagca gaaatcaagg aactggctga
     3301 ccgtctcgtc ccacaaatca agactatcgg cttagcccta ttaggcgcta ctgtaccaga
     3361 agtgggcaaa ccaggcttcg tccttgaaga agatgaattt gaatacggtg tcggtatcca
     3421 cggcgaacct ggctataaga aagaaaaact ccaaccatct gctaaattgg ctgaagaatt
     3481 ggttgagaaa ttggcagaag gcttcgatat tcaagatggc gagcactatg gtgtccttat
     3541 caacggtctc ggcgctaccc ctctcatgga gcaatatgtc tttgccaacg acgttgctca
     3601 attgctggct aaaaaaggtg tggtcgttga ctacaagaaa atcggtaact acatgacatc
     3661 gattgatatg gctggactgt cattgacctt aatcaaacta gaagacccaa gctggattga
     3721 cgctttgcag gcccctgttg aagtggtagc ttggtaggag aaagattatg gatgcaaaaa
     3781 aagcattgct ctggatggag acattcaaca agaaaattca agaaaacaaa gattatttga
     3841 gtgagctaga ttctccaatt ggagatggag atcacggggg caacatggcg cgaggaatgg
     3901 ctgcggtcat gcaggagcta tctgaaaaag actatgagac tgctgaccaa gtctttaaag
     3961 tggttgccat gcaacttctc agcaaggttg gcggtgcttc cggtcctctc tacggctctg
     4021 cctttatggg tattactaaa gccagtcaag ctggcgctga tttggcagat acgcttcaag
     4081 caggtttgga gatgatccaa aaacgcggca aggctgaatt gggcgagaaa accatggtag
     4141 acgtttggat tcccgtcatt gctgccctaa gagaaagcca gctgacaacg gaaattatcc
     4201 ataaagccgt tcaagggaca aaggatattg ctgcgaccaa gggacgcgcg tcctatgttg
     4261 gggaaaggtc tactggacac attgatccag gctctttctc atctggactt ctctttgaag
     4321 ccatgttgga ggcaggacta tgacaaaggt tggtatctta ctcgtatccc attcaaaaaa
     4381 tttggcccag ggaatcatcg acctagtatc tgaagtcgca aaagatattc ccatcaccta
     4441 ctgtggcgga ctagaagatg gtagcatcgg taccagcttt gaaatcgtac aagagcgagt
     4501 tgatgcaaac cctgctgata ccctccttgc ctttttcgac ctaggtagcg cccgaatgaa
     4561 catggaactt gctgccgatt ttacagacaa acaaattctt atccagaccg taccagtcgt
     4621 cgaaggttgc tatactgccg cagctctctt gcaggctgga gctgacttgg agactattct
     4681 tgaacaatta aaagaactga caatcaataa ataggaggtc attatgaatc tgattggaga
     4741 attacttgga acgttcatac tagtattact tggaaacggt gtggttgcat cctgcatcct
     4801 ctctaaaacc aaggctgaaa atagcggctg gctgaccatc gtactaggat ggggcatcgc
     4861 tgtaacaatt gccgtctacg tatcaggaat ttttggacct gcccacctga atccagctgt
     4921 cactatcgca atggcatcta tcggctccct accatgggct caagtcccag gcttcctact
     4981 tgcccaattt gctggagcaa tgttggcatc catcgtcctc tatctccatt tctacccaca
     5041 ttggcaggaa acaaaagata gcggaacaat ccttgctgcc ttctctactg gaccagctct
     5101 tcgtcacaca gcttcaaact tgctcggcga ggctcttggc acagctgtct tagtcatggg
     5161 aatccttgca attggcccta acaatgtcag cgctggcctc ggcccaatca tcgtgggact
     5221 tatcgtattt gcaatcggct tctcactagg atctacaaca ggctacgcag tcaatccagc
     5281 tcgtgacctt ggtcctcgta tcatgcatgc catccttcca attccaaaca agggagattc
     5341 tgactggtct tacagctgga tcccagttgt tggcccaatt cttggaggag tcgcaggagc
     5401 tatcctctat aacctcctac taaa
//
LOCUS       DBNFCX010000111         5411 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.111, whole genome shotgun sequence.
ACCESSION   DBNFCX010000111 DBNFCX010000000
VERSION     DBNFCX010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 5411)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5411)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5411
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.111"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..2962)
                     /locus_tag="AC1PJC_001970"
     CDS             complement(<1..2962)
                     /locus_tag="AC1PJC_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016032 - viral process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail spike protein"
                     /protein_id="HIP6620944.1"
                     /translation="MLSLLDKTVRTAKWHGKPLPETIKASVKENLNGDFVLNFTYPIT
                     DSGLFRELKEDYLVRSPVPVLGYQLFRIKKVIEGDTSLEVVAYHISDDIMTRLVSPFR
                     CEQVSCATALSSMVMASKSPLGDFSFTSDIVKHRTYTTDKEQTLYSSLLDSKHSIIGT
                     WEGELVRDNLALTIKSERGQDCGVIISTHYNLKKYQRIKESSQIITRIHATSSFKHEG
                     NDRETVLQVTVDSPLINSYPFINEVTYTNNSVRTRQELIEWASSKFRLEGIDKPKDAI
                     IIEAFELDGQTVHLGDTVTLKSKLHGIDVRKKAIAYDYDPLAKNYRSITFDDKASIVT
                     GKTGGSLTNLANNLLDGKRRSEDVAVEIALENANRAFEAEFEKRHVAIDNAIEQAQSR
                     GEVYADRLKASIDSELSTIHQQMRQQEEAQQRTTRDLLAKAGVNTNLATEAKQKAEQA
                     QTGATEALRRAEQAKLDAIQEANRLTVTERSQTETKIATAKSQAISEASRLVDVAKSL
                     LSGQLATVSTSLSQTKEDIKLLASKQLVDSLTGRVTGAESMIQVQADQISQRVKTSDF
                     NQAKQRIETSESSITQLGNRITTEISQVDAKIPTSLDGLNLMTGTRDWSNRGNAWHLG
                     NNWSTETENFRGLVVRSTQAGFNGSHQNIVVKAGDVITFSFYAKANQPLSSIKVSAIW
                     TGSSVYRSPVARVRESDDIISVTSDWKRYWKTVHVMSDGSLQFRTEYNANTIPNGNKF
                     YVAGLKVAKSSLDTGYSENPADIAGELTAQRTLITQTASGVEQVSTRLTETNGKISSS
                     ETQIRQLVSDVSSKVSQTDFNTVKRIVEGHTTSIQQTQQSILLKADKTVLEGVKTTAD
                     NALAKANTNASQITQTKADLRIANDAISQKVARTDFNNLTGRVTSAESTIRTQAGQIE
                     QRLTSTQVESAINSKGYQTKSQVDSNITGRGYLTSSSLQPYATTTSVQNLVRTTSDSF
                     TQRISQTESRIPTSV"
     gene            complement(2962..3684)
                     /locus_tag="AC1PJC_001971"
     CDS             complement(2962..3684)
                     /locus_tag="AC1PJC_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HIP6620945.1"
                     /translation="MIRHNALTIGGVSTSSFPFKVIVEDSPSITVSESKSQLIEHQGL
                     SGAVLQSNPRRSLMELSYTLYLVKPSEEQLFSFLKLFLKEGFWLENASFKTIRFWCYK
                     VHHTPVQKDKLGVYELKVSFSCHPTKWFKTTTSQVFRTSGTLRSQGSAIAFPKITISG
                     NSSSETSFTIGDDVIRLERLQETLVMDNNPSQPSFKTQRGQPVKWSGDFITIDAGRND
                     TVGVVLGSGITLLTIETNWGWA"
     gene            complement(3681..>5411)
                     /locus_tag="AC1PJC_001972"
     CDS             complement(3681..>5411)
                     /locus_tag="AC1PJC_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015445172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_process: GO:0098003 - viral tail assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HIP6620946.1"
                     /translation="QSFLKGNYENDAALGISATETTRNAAANKLYGKSFNELSEAQKQ
                     LTLLQMVEDGNELSGALGQAARESDGLENVLGNLRQSGTNALAAIGQPILEMLIPVFQ
                     SLADIVSQLATWFTNLTSPIKEVVIIFTGILAVVGMLLPVFLGLQVAAAAMGTTVVGM
                     ITAFLPIVGIIVGIVAAITLLIVGLKELWTNHEGFRTAVTEIWNSIYAFLSMIIQQIS
                     SFVMSIWGTLSTWWTENQQLILNAATTVWNAITTVIQTVMTILGPLIQASWENIKLII
                     TAAWEMIKIVVETAINVVLGIIKAVMQVITGDWTGAWETIKQVLSMVWEGIKSLISLA
                     LNFIAQYISTAWTGIKNTISNVLSAISSVISSIWSAIQSTISSVLSAIGSTVSTIWNG
                     IRSTVSNILNGISNTVSSVWNGVKNTISSAINGAKDAVSNAINAIKNLFNFQIRWPHI
                     PLPHFRVSGSANPLDWLKGGIPRISIDWYAKGGILTKPTAFGVNGNSLMVGGEAGKEA
                     VLPLNEQTLGAIGRGIAKTMTSNLPTIHITITGNTVREETDLHRLAEMVGEKLVYELE
                     RQQGLRGVKP"
BASE COUNT         1404 a         1212 c         1100 g         1695 t
ORIGIN      
        1 aaactgaggt agggattcta ctttccgttt gactgattcg ctgggtaaaa ctatcagagg
       61 tggttctaac caaattctgc acactagttg tcgtcgcata gggttggaga gaactgctgg
      121 ttagatagcc acgaccagta atattggaat cgacctgtga cttggtttgg taaccttttg
      181 agttaatagc tgattcaact tgtgtacttg ttagtcgttg ttcaatttgc ccagcctgtg
      241 tacgtatagt ggattctgca cttgttactc gaccagtcaa gttattaaaa tcagttcttg
      301 caactttctg tgagatggca tcattggcaa tccgtaaatc tgccttggtt tgggtaatct
      361 gactagcgtt tgtgttggcc ttagccaagg cattatcagc ggttgttttt accccttcaa
      421 gaactgtctt atcagcctta agcaagatgg attgctgtgt ttgttggatg gatgtagtat
      481 gtccttcaac tattcgtttt actgtattaa agtctgtttg actaaccttt gaggatacat
      541 ccgaaactaa ttgtcgaatc tgtgtctcac tactagaaat ctttccattt gtctcggtta
      601 atcttgtaga aacctgctcc acaccagaag ccgtttgagt gatgagtgtc cgttgggcgg
      661 tcaattctcc agcaatatct gctgggtttt ctgaataccc tgtatccagt gagctttttg
      721 cgactttcaa tcctgctaca tagaatttat tcccatttgg gatggtgttt gcattgtact
      781 ccgttcgaaa ttggagtgaa ccatctgaca tgacatgaac tgttttccag tagcgtttcc
      841 agtcactggt gacagaaatg atatcgtctg attctctcac tcttgcgact ggagatcgat
      901 aaacactcga accagtccaa atcgctgaaa ctttgatgga agaaagtggc tgattcgctt
      961 tggcataaaa gctaaaagta atgacatctc ctgctttcac aacaatattc tgatgacttc
     1021 cgttaaaccc tgcttgagtt gaacgaacaa ccagtcctct gaaattctct gtttcggtag
     1081 accagttgtt tcctaaatgc caggcatttc ctctattcga ccaatcacga gtaccagtca
     1141 tcaaatttag gccatctagg ctagttggaa ttttcgcatc cacctgactg atttcagttg
     1201 ttatgcgatt ccccaattgc gtaatagatg actcggaagt ttcgattctc tgttttgctt
     1261 ggttaaaatc actggttttt acacgctggg aaatttggtc tgcttgcact tgaatcatgg
     1321 attctgcacc ggttactcga ccagtcagac tatccaccag ttgcttactc gcaagaagtt
     1381 ttatatcctc cttggtttgc gagagacttg tacttacagt agccaactgt ccactcaaca
     1441 gtgattttgc tacatcaact aatcgactag cttcagagat agcttgtgat tttgctgtcg
     1501 caatctttgt ctcagtttga ctacgctctg ttacagtcaa gcggttagct tcttgaatgg
     1561 catcaagctt ggcttgttct gccctcctga gggcttcagt cgcaccagtt tgagcctgtt
     1621 ctgctttttg tttggcttct gtagctaggt tggtgtttac cccagccttt gccaataaat
     1681 cacgagttgt gcgttgctgt gcctcttctt gttgccgcat ctgttggtga atagtagaaa
     1741 gttcactatc aatgctagcc tttaatcgat ccgcatagac ctccccacga ctttgagcct
     1801 gttcgatagc gttatcgatg gctacgtgac gtttctcaaa ttctgcttca aaggctctgt
     1861 tggcattctc aagggcaatt tcaacggcaa catcctcact ccgccttttc ccatcaagga
     1921 gattatttgc taggttagtc aagctaccgc cagttttacc tgtaacgata cttgccttat
     1981 catcaaaagt gatagagcgg taattcttag ctaaaggatc ataatcataa gcgatggctt
     2041 tcttcctcac atcaattccg tgtagcttgc tttttaaagt tactgtatcg cctagatgaa
     2101 ctgtttgacc atctaactca aatgcctcaa tgatgatggc atcttttggt ttatcaattc
     2161 cctctaagcg aaacttgcta ctagcccact ctattaactc ttgacgagtt ctgacgctat
     2221 tattggtata ggtcacctca ttgatgaaag gataggagtt tatcagtgga ctgtctactg
     2281 taacttgaag tacagtttcc ctatcattcc cctcgtgttt gaagcttgaa gtggcatgaa
     2341 tacgagtgat aatctgtgaa ctttctttga ttcgttgata ctttttcaaa ttgtagtgag
     2401 tcgagatgat taccccacag tcttgtcctc gctcactctt tatagttagg gcaagattat
     2461 cacgaaccag ttccccctcc caagttccaa taatagaatg tttgctatcc aacaggctgg
     2521 agtaaagcgt ttgttccttg tccgttgtat aggttctgtg cttgacaatg tcactggtaa
     2581 aagaaaaatc tcccagtgga gacttacttg ccatgaccat gctagataga gctgttgcac
     2641 aggatacctg ttcacaccta aatggcgata ccaaccttgt catgatgtca tctgatatgt
     2701 gataggctac aacttcaaga ctggtgtcgc cttcaatgac tttctttatc cgaaacaatt
     2761 ggtatcccaa tactggaact ggactacgaa cgaggtagtc ctcttttaac tctcgaaata
     2821 atccgctgtc tgtaattgga taggtaaaat tcaggacaaa atccccattc aagttttctt
     2881 tgacacttgc ttttatggtc tctgggagtg gtttcccatg ccattttgcc gttcgaacgg
     2941 ttttgtctaa taaagatagc actatgccca cccccaattc gtttctattg ttaataatgt
     3001 gatgccagaa cctaagacaa ctccaactgt gtcatttctg cctgcatcta tggtaatgaa
     3061 atcgccagac cattttacag gctgacctct ttgtgtctta aaacttggct gactaggatt
     3121 attgtccata acaagtgttt cctgtaatcg ctccaagcgg atgacatcat ccccaatcgt
     3181 aaagctagtt tcactacttg agttgccact tatggtaatc tttggaaacg ctatggctga
     3241 accttgactt ctcaaagtac cactagtcct aaatacctgc gaggtcgtcg ttttgaacca
     3301 cttggttggg tgacaagaaa aagaaacctt aagctcatac acacccagct tatccttttg
     3361 aactggagta tggtgaacct tgtaacacca aaagcgtatg gtcttgaaac tagcgttctc
     3421 aagccaaaat ccttctttca gaaatagctt caaaaaagaa aataactgtt cttcactagg
     3481 tttaacaaga tagagggtgt agctcagttc catgagactt ctacgaggat tgctttgaag
     3541 aaccgctcct gacaggcctt ggtgttctat caattgtgac ttactttcac ttactgtgat
     3601 tgaagggcta tcttccacga ttaccttaaa aggaaaacta gatgtggata ctccaccaat
     3661 ggttaatgca ttatgtctaa tcatggtttc actcctctca atccttgctg acgttctaat
     3721 tcatatacta gtttctctcc aaccatctcc gctagtcgat gaaggtcagt ctcttctctt
     3781 actgtgttac ctgtaatagt gatgtgaatg gtcggtagat tgcttgtcat ggtctttgcg
     3841 attcctcgac caattgcacc taacgtttgt tcattcaaag gcaagactgc ttcttttcca
     3901 gcctcacctc caaccattag gctattgccg tttaccccaa atgcggttgg tttggttaaa
     3961 attcctcctt tggcatacca atctatagaa attcttggaa ttccgccctt caaccaatcg
     4021 agcggattgg ctgaaccaga tactcgaaaa tgaggaaggg gaatatgcgg ccatctgatt
     4081 tggaagttaa aaagattttt aatggcattg atggcgttac tcacggcatc ttttgcacca
     4141 ttgatggcac ttgaaattgt atttttcaca ccgttccaaa cagatgaaac tgtattggat
     4201 atcccattca gaatgttgga tacggtactt ctgataccat tccatatagt tgatactgtt
     4261 gaaccaatcg cagacagaac actggaaatt gtcgactgaa tagctgacca gatagatgaa
     4321 atgacagaac taatggcaga taatacattt gagatggtat tcttgatacc cgtccaagca
     4381 gttgagatgt actgggcaat gaaattgaga gctaaggaaa taagggactt aatgccctcc
     4441 cataccatcg acaagacctg tttgatggtt tcccaagcgc cagtccaatc accagtgata
     4501 acctgcatga ctgccttgat gataccaagt accacattga tagcagtctc gaccacaatc
     4561 tttatcatct cccaagcggc tgtgatgatg agtttgatat tctcccaact tgcttggatg
     4621 agcggtccaa gaatagtcat taccgtttga ataacggtag tgatggcatt ccataccgtg
     4681 gttgcagcat ttagaatcaa ttgctggttt tcagtccacc atgtggatag cgttccccag
     4741 atggacataa caaaactaga aatctgctgg atgatcatgg acagaaaggc atagatacta
     4801 ttccagattt ccgtcacagc cgttcgaaag ccttcgtgat tcgtccagag ttcttttaac
     4861 ccaacaatca ataaggtaat ggcagctaca ataccaacaa taatccccac aatcggcaaa
     4921 aatgccgtta tcattccaac aacggttgtc cccatagcgg ctgccgcaac ctgtaagccc
     4981 aagaaaacag gaagtaacat ccctaccacg gctaaaatac ctgtgaagat aatgacgact
     5041 tccttgatgg gactggttaa gttggtaaac caagtcgcta gttgactaac aatgtctgcc
     5101 aaactttgaa agactggaat aagcatctcc agaatcggtt gaccgattgc tgctagagca
     5161 ttagttccag actgtcttaa gttacccaga acgttttcca gtccgtctga ttcccttgca
     5221 gcttgtccca aggctccaga gagttcattg ccgtcctcta ccatttgaag gagggttaac
     5281 tgcttctgag cttctgatag ttcattgaag gattttccat agagcttgtt cgccgctgca
     5341 ttacgagtgg tttctgtcgc agaaatacct agagctgcgt cattttcata gtttcctttg
     5401 aggaaggact g
//
LOCUS       DBNFCX010000112         5405 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.112, whole genome shotgun sequence.
ACCESSION   DBNFCX010000112 DBNFCX010000000
VERSION     DBNFCX010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 5405)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5405)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5405
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.112"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..248
                     /locus_tag="AC1PJC_001973"
     CDS             <1..248
                     /locus_tag="AC1PJC_001973"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HIP6620947.1"
                     /translation="SLALIKPRKLESHFLNSIIQSKDFQNELWKRTLHIAFPKKINKG
                     EISEVNLKFPSLPEQEAIGTFFSTLDRHITLHQRKSI"
     gene            complement(252..1175)
                     /locus_tag="AC1PJC_001974"
     CDS             complement(252..1175)
                     /locus_tag="AC1PJC_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014294525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HIP6620948.1"
                     /translation="MNKITRETLLHEYFKEWTRLFKEGAVRPITLEKYRNNHYHLKNI
                     VPDLVLHQLDRTTYQQILNDYALTHERQTVIDFHHQLKGAVLDAVDEGYIDRDPTRKV
                     IFKGKAPRIKKMKYLNQFELHNVLSDLDLECRINWDWLILLIAKTGLRFSEALGLTPA
                     DFNFVQQNVSVTKTWNYKGNGGFLPTKNKSSMRKVQIDWQLSMQFQQLIKDLPQDKPI
                     FVNGSVCNSTPNKWLERHCKNVGVPVISIHGLRHTHASLLMYAGVSIASVSRRLGHSS
                     MTTTQKVYMHVISELENQDTDLVMRYLSGLS"
     gene            complement(1190..1753)
                     /locus_tag="AC1PJC_001975"
     CDS             complement(1190..1753)
                     /locus_tag="AC1PJC_001975"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013579.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HIP6620949.1"
                     /translation="MKCHPPPLWDRVKNTPAWELRKLGEYSTLITKGTTPRDKSGIGV
                     VNFVKVENLVNGDIIPLQKIQLEEHEGYLKRSQLIENDILFSIAGTLGRTAIVKKSIL
                     PANTNQALSIIRGYEFDRNFLVTILRGVVVREFIKKNPTIGAQPNLSLEQVSNLCFLT
                     PCSEEQSAIGTFFSTLDQQITLHQRKS"
     gene            complement(1838..4963)
                     /locus_tag="AC1PJC_001976"
     CDS             complement(1838..4963)
                     /locus_tag="AC1PJC_001976"
                     /EC_number="3.1.21.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008089776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009035 - type I site-specific
                     deoxyribonuclease activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HIP6620950.1"
                     /translation="METISKNASEREFQDKFVRELSKFKWQTPEHLNGNLQKVTVQDL
                     INNWRSELNRMNADVLEGVALTDSEFDQVMTKVKQISNSYEAAKILSMEGSTGKIDGI
                     YRDQHPHVTKKQITLTILKKAQVSGGDSSYQVAREVWSDNGNRFDLVLLINGLPLINI
                     EQKRSDKSLDEAFGQFKRYYADGEYTNNFMVFSQMMVVTTDIETRYFATPKSINDFNP
                     AFVFHWSVTKKDQASGKHLGQRVLTDFREVIEHFLMVPMAHQMVGDYLIIDEDPDNEE
                     NRRHMLMRPYQVYALQAVEKAAFGWDNAEKTPHGGFVWHTTGSGKTITSFKTAQFLST
                     RTEFDKVVFLLDRRDLDEQTSKAFKAYATYESVNVDDTKSTYQLRKQLTASKSGIVVT
                     TTFKLSNLVKDLMDADDRGLADKKIIFIIDEAHRTTMGDMMGMIKDYFIKNGLFFGFT
                     GTPLFDENKVKGKINERSELINTTEKLFGPLLHQYTIDEAIADGNVLGFHVDYINTGE
                     FRSYEDLREDLIELLTEKHPEKAVKEIERQVMRLSELDVEKHAAKEGLLVYHDQTHIP
                     KVVEEILSGWQEQSQGGEFNAMLTVAFKERVIAYYHEFKKQIAEQFTDGAVKPNIAMT
                     FSFGNENDPDNVAREVIEEMFADYEGFTGIRFIAGDKKKGEDAYFEDVTDRAKRGGSG
                     RNPKNIDILIVADQLLTGYDAKRLNTLYVDRKLELQGLIQAYSRTNRVFGSSKEFGTI
                     INFQYPRITEEIVKEALLLYGSGGSNSRVLVEKYGVAVELLRTKVEALRSELSNPTKW
                     IDIQYDDEKKETFKTAFKETFKQVERVKQYYEFVWDDEAFGLDEHSWLQYIGAYRNLF
                     PRGTGGNDWMPKELKGRTKLQGSQIIDAQSLFALIGNKTTNEGGFQVINDNNLVLILE
                     QIQELSDLGENELAEALKTFINEELVTGQLSASVDFDVAFKEWQENRQFAVIKEFASQ
                     WGIDSDLLRKSLQEYNANKPGEIPFREEITSTLDPHQATNEFAGNKLKLNMNLNKVLP
                     QWMAETRQKYK"
     gene            complement(5012..>5405)
                     /locus_tag="AC1PJC_001977"
     CDS             complement(5012..>5405)
                     /locus_tag="AC1PJC_001977"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013579.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HIP6620951.1"
                     /translation="YRLSIGDILFARTGASVGKSYIYRSVDGKVYFAGFLIRVKIKDT
                     FNPDFVFQNTLTSNYERFISITSMRSGQPGVNAQEYSNYEIMFPSLPEQEAIGTLFST
                     LDQHITLHQRKLEKLKNLKKALLNELFV"
BASE COUNT         1501 a         1205 c         1020 g         1679 t
ORIGIN      
        1 ttagcctggc actaataaaa cctagaaagc tagaaagtca ttttttaaat tcaataattc
       61 aatcaaagga ttttcaaaat gaactatgga agaggacact tcatattgct tttccaaaaa
      121 aaatcaataa aggggaaatt tcggaggtaa atcttaagtt cccctccctc cccgaacaag
      181 aagccatcgg caccttcttc tccaccctcg accgccacat cacccttcat cagcgtaagt
      241 cgatttgatg tctagcttaa gccagatagg taacgcatga ctaaatctgt atcttgattt
      301 tcaagttccg agatgacatg catatagact ttttgggtgg ttgtcatgga ggagtgtccc
      361 aatcgcctgg acacactagc tattgaaaca cctgcataca tcaaaagaga ggcatgggta
      421 tgtctaagcc cgtggataga aatgactggt acacccacat ttttgcagtg gcgctccaac
      481 cacttatttg gagtggagtt gcagactgaa ccattcacaa aaataggctt atcctggggt
      541 aagtctttga tgagttgctg aaattgcata ctcaactgcc aatcaatctg cactttccgc
      601 atggaagatt tatttttggt aggtaaaaaa ccaccatttc ccttgtaatt ccatgtcttt
      661 gtcacggaaa cattctgctg aacaaagtta aaatcagctg gtgtcagacc taaagcctct
      721 gaaaatcgca gccctgtctt cgcaatgagc aaaatcagcc agtcccagtt gatccgacac
      781 tccaagtcca aatcagaaag aacattgtgg agttcaaact gatttaagta tttcattttt
      841 ttaattcttg gtgccttgcc cttaaaaatc actttacggg tcggatctcg gtcaatataa
      901 ccctcatcaa cagcatccaa gactgcaccc ttgagctgat gatgaaagtc aatgactgtc
      961 tgacgttcat gggtcagagc atagtcattc aaaatttgct gataggttgt cctgtccaac
     1021 tgatgtaata ccaagtcagg cacaatattt tttaaatgat aatgattatt gcgatacttt
     1081 tcgagggtaa ttgggcgaac agctccctct ttaaacagtc ttgtccattc tttaaaatat
     1141 tcatgaagta aggtttctcg tgtaatttta ttcatagtat tcattccttc tacgacttac
     1201 gctgatgaag ggtgatttgt tggtctaggg tggagaagaa ggtgccgatg gcggattgtt
     1261 cttcggagca aggagttaaa aaacaaagat ttgatacctg ttcaagtgac aaatttggtt
     1321 gagcaccaat agttggattt tttttgataa actcccttac tacaacgcct cgtagaatgg
     1381 taactaaaaa atttctatca aattcatacc cacgaattat tgaaagtgcc tgattagtat
     1441 ttgcgggcag aattgatttc tttactatag cagtacgtcc taacgtacca gcaattgaaa
     1501 ataatatatc attttcaatt aattgagagc gttttaaata tccttcatgt tcttcaagtt
     1561 gaattttttg aagcggaata atatctccgt tcactaaatt ttctaccttg acaaaattta
     1621 caacacctat accagacttg tctcgcgggg tagttccctt agttattaaa gttgagtatt
     1681 cccccaactt ccgcagttcc caagcaggag tattttttac cctatcccac agtggcggtg
     1741 gatgacattt tattcatccg ataggtgctg gaaaatgttt tctgttggtt tctgaaaacg
     1801 acgaaaaaga ccaagaaaaa tcttggcctt agtggtctta tttgtatttt tgcctagttt
     1861 ctgccatcca ttgtggtaga accttgttca aattcatatt gagttttagc ttgttgccag
     1921 cgaactcatt ggtggcttga tgggggtcta aggtcgaagt gatttcctca cggaaaggaa
     1981 tttctcctgg cttgtttgca ttgtattcct gtagtgactt tctaagcaag tcactatcaa
     2041 ttccccactg actagcaaat tccttgatga ccgcaaactg tctattctcc tgccattctt
     2101 taaaagcgac gtcaaaatcg acagaggcag acaattgacc tgtgaccaat tcttcgttaa
     2161 taaaggtttt caaggcttca gccagttcat tctcaccaag gtcactcaat tcttggattt
     2221 gctccaaaat caagaccaaa ttattgtcat tgattacttg gaaaccacct tcattggttg
     2281 ttttgtttcc tatcaaagca aataaacttt gggcatcaat gatttgacta ccctgcaatt
     2341 tggtacgccc cttcaactct tttggcatcc aatcattgcc accagttcct ctaggaaaca
     2401 ggtttctata ggcaccaatg tactggagcc agctatgctc atccaatcca aaggcttcat
     2461 catcccagac aaactcatag tattgcttga cacgttccac ttgcttgaag gtttctttaa
     2521 aagcagtttt aaaggtttcc ttcttctcat catcatactg gatgtcaatc cacttggtcg
     2581 ggttggacaa ttctgaccgt agagcctcta cttttgtccg aagtaactct accgcaaccc
     2641 catatttttc aacaagaaca cggctattgc ttccaccgct accgtatagc aacaaggctt
     2701 ccttaacaat ttcctctgtt atgcgagggt attggaaatt gataatggta ccaaattcct
     2761 tgctagaacc aaaaacccgg ttggttcgag aatatgcctg tattaagccc tgtaattcca
     2821 gcttcctatc aacgtagaga gtattcaagc gtttggcatc ataacccgtc agaagctgat
     2881 ctgctacgat gagaatatcg atattcttcg gattacgacc gcttccacca cgcttggcac
     2941 ggtcagtcac atcttcaaaa tatgcatctt cgcccttttt cttatcacca gcaataaaac
     3001 ggatacctgt aaaaccttca taatccgcaa acatctcttc aatgacttcc ctagcgacat
     3061 tgtcaggatc attttcattt ccaaaactaa aggtcatggc aatattgggc tttacagctc
     3121 catccgtaaa ctgctctgct atttgctttt taaactcgtg atagtaggcg atgacccgct
     3181 ccttaaaagc aaccgtcagc atggcattga actcgccacc ctgtgattgt tcctgccagc
     3241 ccgacaaaat ctcctctacc actttaggga tgtgggtttg atcgtgatag actaaaagtc
     3301 cctctttggc cgcatgcttt tctacatcca attctgacag ccgcatgact tgacgttcaa
     3361 tctctttgac agctttttct ggatgttttt ctgttagaag ctcaatcaaa tcctcacgta
     3421 aatcttcata gctcctaaat tcccctgtat tgatgtagtc cacatggaag ccaaggacat
     3481 tcccatccgc aatcgcttcg tcaatggtat attggtgaag gagtggacca aacaattttt
     3541 cagtcgtgtt aatcaactca ctgcgttcgt taattttccc cttgaccttg ttttcatcaa
     3601 agaggggcgt accagtaaag ccgaaaaaga gaccgttttt aatgaaatag tctttaatca
     3661 tccccatcat atcgcccatg gttgtcctgt gggcctcatc aatgatgaaa atgattttct
     3721 tatctgccag acctcgatca tcagcatcca tcaagtcctt gaccaaattg ctcaatttaa
     3781 aggtagtggt tacaacaata ccgctctttg aagcagttaa ttgtttgcgg agctgatagg
     3841 tgcttttggt gtcgtcaaca ttgacagatt cataagtcgc gtaagcctta aaggccttgg
     3901 aagtctgctc atccaaatcc cgtctatcta gcaagaagac aaccttatca aactccgttc
     3961 gtgttgaaag aaattgagct gttttaaagc tggtgatggt ctttccagaa cctgtcgtat
     4021 gccaaacaaa gcccccatgt ggtgtttttt ccgcattatc ccaaccaaaa gctgcctttt
     4081 caactgcctg cagggcatag acctgatagg gacgcataag catgtggcgt ctattctcct
     4141 cattatctgg atcttcatcg ataatcaggt agtctcccac catctgatga gccattggaa
     4201 ccatcagaaa atgctcaatg acttctctga aatctgtcaa gaccctttgt cccaaatgct
     4261 taccacttgc ttggtctttc ttggtgacag accaatgaaa aacaaaggca ggattaaaat
     4321 cgttgataga cttaggcgtc gcaaaatacc gggtttcgat gtctgttgtg accaccatca
     4381 tttgtgaaaa gaccatgaag ttattggtgt attctccatc ggcataatag cgtttaaact
     4441 gaccaaaggc ctcgtccaag gacttgtcac tccgcttttg ctcaatgtta atcaagggca
     4501 gaccgttaat caataagact aggtcaaagc ggttgccatt gtccgaccaa acttcgcgag
     4561 ccacttggta gctggaatct cctccactaa cctgagcctt tttcaaaatg gttaaggtaa
     4621 tttgcttttt ggtcacatgt gggtgctggt cacggtaaat accatcgatt ttgccagtag
     4681 aaccttccat ggataggatt tttgcggcct cgtagctatt ggaaatctgc ttgacctttg
     4741 tcataacttg atcgaactcg ctatcggtaa gagcaacacc ttccaagaca tccgcattca
     4801 tacgatttag ctctgaccgc caattattta tcaaatcctg aactgtaact ttctgtaagt
     4861 ttccatttag gtgttcagga gtttgccatt taaacttgga taattcccga acgaatttat
     4921 cttgaaattc acgttctgaa gcgttttttg agatagtttc catacatttc ctttctatca
     4981 tcatgtaagt aactgctact tacgctgaaa atcatacaaa cagctcattt aaaagtgctt
     5041 ttttcaagtt tttgagtttt tctagcttac gctgatgaag ggtgatgtgt tggtctaggg
     5101 tggagaagag ggtgccgatg gcttcttgtt cggggaggga tgggaacatg atttcataat
     5161 ttgagtattc ctgcgcattg accccaggtt gtcctgaacg catagacgtg atgcttataa
     5221 atctctcata atttgaagta agagtatttt gaaaaacaaa atcaggatta aaagtatctt
     5281 tgatttttac tctaatcaag aaccctgcaa aataaacttt tccatctaca cttctataaa
     5341 tatagctttt gccgacactg gcccctgttc gtgcaaatag aatatctccg atacttaatc
     5401 tgtat
//
LOCUS       DBNFCX010000113         5376 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.113, whole genome shotgun sequence.
ACCESSION   DBNFCX010000113 DBNFCX010000000
VERSION     DBNFCX010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 5376)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5376)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5376
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.113"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            256..1017
                     /locus_tag="AC1PJC_001978"
     CDS             256..1017
                     /locus_tag="AC1PJC_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620952.1"
                     /translation="MTQKREERLIELYEKGVLTKEEARACFKEMNQEPDFLFVEEKVK
                     LNFTLPSFKVFASSKLKQSYSFEGIESLFLKLSEGRLTLAKSKNNQISVEICYNQDAP
                     EDKLPRLYVEKKGLYFHSSLACRLTINLPQEWMSVLDLELGQADARLDYLPFEDISIR
                     SSRDKKQQDIRLTTCGGYPQHLYVQLAQAPLTLHTGKGQGIRGQIESQSGHVLVNRKK
                     KNSPYQFEKSGNDLLFLKVQTGQGGFYVKGIKDVN"
     gene            1007..1279
                     /locus_tag="AC1PJC_001979"
     CDS             1007..1279
                     /locus_tag="AC1PJC_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PspC domain-containing protein"
                     /protein_id="HIP6620953.1"
                     /translation="MSIELYKVRQGKIVSGVLAGIAHKLGWESWVTRAIFIAGLLLGK
                     SFLLLIALYIAAAYFLPYKEDRDAERYGTGPRKIKEAEKINKSWFE"
     gene            complement(1427..2368)
                     /gene="manA"
                     /locus_tag="AC1PJC_001980"
     CDS             complement(1427..2368)
                     /gene="manA"
                     /locus_tag="AC1PJC_001980"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004476 - mannose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-6-phosphate isomerase, class I"
                     /protein_id="HIP6620954.1"
                     /translation="MEPLFLTPVMHEKIWGGNRLRTNYHYDIPSEKTGECWAISAHPN
                     GVTTVSNGQYKGRGLDDLYKNEKHLFGNPTDDVFPLLTKILDADDWLSVQVHPDDSYG
                     LAHEGELGKTECWYILEAEEGAEIIYGHNAQSKEELRQQIEAGDWDKLLTHVPVKKGD
                     FFFVPSGTMHAIGKGILILETQQSSDTTYRVYDFDRRDDAGNLRELHIEKSIDVLTIG
                     PVANSTPAHLKAGNLDSTLLVANPFFTVYKWNIQQEIKMEQTVPYLLVSVIEGEGTIQ
                     VGETSYPLQKGSHFILPANVTDWTFTGQMDIIASHIN"
     gene            2586..3518
                     /gene="hprK"
                     /locus_tag="AC1PJC_001981"
     CDS             2586..3518
                     /gene="hprK"
                     /locus_tag="AC1PJC_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006109 - regulation of carbohydrate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr(Ser) kinase/phosphatase"
                     /protein_id="HIP6620955.1"
                     /translation="MTVYVKDLVDNLRIECAYSTEELLQKQITTADITRPGLEMTGYF
                     DYYAPERIQLIGMKEWSYLMAMTAHNRYQVLSQMFQPETPVVIVARGLEIPEEMYKAA
                     KEKLIAICRSKTATSRLSGELSSYLDSRLAQRTSVHGVLMDIYGMGVLIQGDSGIGKS
                     ETGLELVKRGHRLVADDRVDVYAKDDVTLWGEPAEILRHLLEIRGVGIIDIMSLYGAS
                     AVKDSSEVQLAVYLENFETGKVFDRLGNSGDTIEIAGIAIPQIRIPVKTGRNISVVIE
                     AAAMNYRAKQMGFDATKIFEERLSNLIEHNREEA"
     gene            3520..4296
                     /gene="lgt"
                     /locus_tag="AC1PJC_001982"
     CDS             3520..4296
                     /gene="lgt"
                     /locus_tag="AC1PJC_001982"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HIP6620956.1"
                     /translation="MDPIAIKLGPLEIRWYAICILLGLILGVYLATKEGPRKKIRQDD
                     ILDFILIAFPLSIIGARIYYVAFSWSEYKDNILSIFAIWNGGIAIYGGLITGAIVLYF
                     FTQYRFINTLDFLDIVAPSVMIAQAIGRWGNFFNQEAYGKAVESLNYLPAFIRDQMYI
                     DGAYRQPTFLFESLWNLLGFGLVCVLRRRPKFFKQGEIAAFYLVWYGCGRLLIEGLRT
                     DSLMFLGIRISQWLSGVLILVGIIMVVLRRRKSSIPFYQP"
     gene            4310..4720
                     /locus_tag="AC1PJC_001983"
     CDS             4310..4720
                     /locus_tag="AC1PJC_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF948 domain-containing protein"
                     /protein_id="HIP6620957.1"
                     /translation="MIEISVLIIALSIAAVAVYIVLLLKKLGTVTDEAQQTLKVLTSD
                     VNVTLYQTNELLAKTNVLVEDVNGKVSTLDPLFVAVADLSTSVSDLNASARDLTVKAK
                     SAGASTVKAGGALSALSTLSSLLGKKGEKNGKKI"
     gene            4704..5240
                     /locus_tag="AC1PJC_001984"
     CDS             4704..5240
                     /locus_tag="AC1PJC_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HIP6620958.1"
                     /translation="MVKKSSSVWTSLLLGAAGGAAAAAFLASKTGKTVKEKVVNFAND
                     YKENHEEINADFVTKAQDLGKQATERFTEVKTQLETGELTVEDLVKSGKEKSLETFEQ
                     IKEKIAEQNLSTADILEAIKAKTVKAPTVDLTEEDIEDAVVVSEDIELTIDDVIIEPV
                     SETVSEVASETASETVEG"
BASE COUNT         1540 a          961 c         1249 g         1626 t
ORIGIN      
        1 tattttggtg tttgatgagt tccatcaaaa acatctgcaa cctcccccaa cttccgcagt
       61 tcccaagcgt gatgattttt atacgctcag agttgagtaa tagaattaaa ttttgggttt
      121 tcaaagcaga attttcatcc attttcagaa aaatctatca attgccttgg taaaccttga
      181 ttttctagaa tcagtcttcg ggctgatttt tttgtggaga aatgtgatat actagagtag
      241 aattgaggtg agtctatgac gcaaaagaga gaagaacgct taattgagtt atatgaaaaa
      301 ggtgtcttga ccaaggaaga ggcgcgtgcc tgttttaagg aaatgaatca agaaccagac
      361 tttctttttg tggaagaaaa agtaaaattg aattttacct tgccaagttt taaggtcttt
      421 gcttcctcca aattgaaaca atcttatagt tttgaaggga ttgaatcact ctttttaaaa
      481 ttatctgagg gacgtctaac tttggctaag tctaaaaaca atcagattag tgtggagatt
      541 tgctacaatc aagatgcacc agaagataag cttcctcgtc tttatgttga aaaaaagggg
      601 ctttattttc acagtagctt ggcctgtcgt ttgacaatca acttgcctca ggaatggatg
      661 tcggtgctgg atttggaact tggtcaggca gatgctcgct tggattactt accatttgaa
      721 gatatttcta tccgcagttc aagggataaa aaacaacagg atattcgctt gacgacttgc
      781 ggtggttatc cccaacactt gtatgtgcaa ctagctcagg ctcccttgac tttacacact
      841 ggcaaaggcc agggaattcg ggggcagatt gagtcgcaat ccggtcatgt cttggttaac
      901 cggaaaaaga aaaatagtcc ctatcagttt gaaaaatctg gcaatgattt acttttcttg
      961 aaggtacaaa caggtcaagg gggcttttac gtgaaaggaa taaaagatgt caattgaatt
     1021 gtataaagta aggcagggga agatagtatc tggggttctt gccggcatag cgcataaatt
     1081 gggctgggaa tcctgggtaa cacgcgcgat atttattgca ggtctcctct taggcaaatc
     1141 cttcctcctt ctgattgctc tctatattgc agcagcttat tttttacctt ataaggaaga
     1201 tagagacgcg gaacgctatg gaacaggtcc acgtaagata aaagaagcgg aaaagataaa
     1261 taagtcttgg tttgaataat gcaaaaaaac ttgagtttaa aggctcaagt tttttgtatg
     1321 cttatactca atgaaaatca aaagtagcct aggaaacgaa gtcgaagata gaacttgagt
     1381 tcatcaaggc aagttgacaa cggataattt tgattttcga agagtattag tttatgtggc
     1441 ttgcgatgat gtccatttgt cctgtaaatg tccagtctgt cacattggct ggtagaataa
     1501 agtggcttcc tttttgaagt gggtagctgg tttcaccgac ttggatggta ccttcccctt
     1561 caatgacact gacaagcagg taaggaactg tctgttccat tttaatttct tgctggatat
     1621 tccatttata tacggtaaag aagggattgg cgaccagaag tgtcgagtca agattgcctg
     1681 ctttgaggtg ggcaggtgtg gagttagcaa caggtccgat ggtcagtaca tcaatcgatt
     1741 tctcaatgtg tagttcacgg aggttgcctg catcgtcacg gcggtcaaag tcatagacac
     1801 ggtaggttgt atcactggat tgttgagttt ctaaaatcag gattccctta ccgatggcgt
     1861 gcatggtgcc gcttggtaca aagaagaaat cacctttttt gacggggaca tgggtcaaca
     1921 gcttgtccca atctccagct tcgatttgct gacggagttc ttctttggat tgggcattgt
     1981 gaccataaat gatctcagcg ccttcctcgg cttccaaaat gtaccaacat tctgtcttgc
     2041 ccagttctcc ttcgtgagcc aagccatagc tatcatcggg atggacttgg acgctaagcc
     2101 aatcgtctgc atcaaggatt tttgttaata atggaaagac atcatctgtt ggattgccaa
     2161 ataaatgttt ttcattctta tagaggtcat ccagtcctct tcctttatat tgaccgtttg
     2221 agacagtagt tacgccattt ggatgggcag aaatagccca acattcccca gtcttttcac
     2281 taggaatgtc gtagtggtag ttggtcctta ggcgattgcc cccccaaatt ttttcgtgca
     2341 taacaggtgt gagaaacaag ggttccatat ttttctcctt attagtaagt attgatctat
     2401 ataaagtata acagatttgt taaaaatatg tagcgtagga agagaagtgc atttaatctg
     2461 tggaagtttt gctaattttg tgagaaaaag aaagaaactc attcttttta ccaaatcagc
     2521 cccttgtttt tcccccaacc cctagcttat ggtataatat aataaaactg aaagtgaggg
     2581 aagaaatgac cgtttatgtg aaagatttgg tcgataatct gcggattgaa tgtgcttaca
     2641 gtacggaaga gctcctgcaa aagcaaatta cgacggcaga tattacccga ccaggattgg
     2701 aaatgactgg ctattttgat tactatgctc cagagcgcat ccagttgata gggatgaagg
     2761 aatggtctta tttgatggcc atgactgccc ataaccgcta tcaggttctt tctcagatgt
     2821 tccagccaga aacccctgtt gtcatagtag cacgtggctt ggaaatccct gaggagatgt
     2881 acaaggctgc aaaagaaaaa ctaattgcta tctgtcgaag caagacagca accagtcgtc
     2941 tatcgggaga attgtcttct tacttggata gtcgcctggc tcagcggacg agtgtacacg
     3001 gtgtcttgat ggacatttac ggtatgggtg tgcttatcca gggtgattct ggtatcggta
     3061 agagtgagac tggtcttgag ttggttaaac gaggacaccg attggtggct gatgaccgtg
     3121 ttgatgtcta tgcaaaagac gatgttactc tctggggtga gcctgcggaa attctgcgcc
     3181 acttattaga gattcgagga gtcggcatta tcgacatcat gagtctatac ggtgctagtg
     3241 ccgtgaaaga ttcatcagaa gtgcaattag ctgtttatct tgaaaatttt gaaacaggta
     3301 aggtatttga ccgtttggga aactctggcg atactatcga aatagcagga attgctattc
     3361 cacaaatacg tattcctgta aaaaccggtc gaaatatttc tgtcgtaatt gaagcagcag
     3421 ccatgaacta ccgtgccaaa cagatggggt ttgatgcaac gaagatcttc gaagaacgct
     3481 tgtctaatct aattgaacac aatagagaag aggcttaata tggatcctat tgcgattaaa
     3541 ttaggtccct tagaaattcg ttggtatgca atctgcattt tgcttggtct gattctaggt
     3601 gtttatctgg cgacaaaaga gggtccgcga aagaaaattc gtcaggatga tattttagat
     3661 tttattctaa tcgcatttcc gctttctatc ataggggcac ggatttacta cgtcgccttt
     3721 tcatggagtg aatataagga taacatttta tctatcttcg ctatctggaa cggtggtatt
     3781 gccatctatg gtggtttgat tacaggtgca atcgtccttt atttctttac ccagtatcgc
     3841 tttattaata ccctggattt tttggatatt gtagcgccat cggtcatgat tgctcaggca
     3901 atcggtcgtt ggggaaattt ctttaaccaa gaggcctatg gtaaggcagt agaaagtttg
     3961 aactacctgc cagcctttat ccgagaccag atgtatattg atggtgccta ccgtcaacca
     4021 accttcttgt ttgagtctct ctggaatttg ctaggctttg gcttggtttg tgtgttacgt
     4081 agacggccaa aattctttaa acagggagaa attgcagctt tctacctagt ctggtatggt
     4141 tgtggtcgcc ttttgataga aggcttgcgg acggacagcc tcatgttctt gggaatacgt
     4201 atttcacaat ggctatctgg ggtgttaatc ctcgttggta ttatcatggt tgtgttgcgg
     4261 agaagaaagt cttctattcc attctatcaa ccctaaagga gaagatatga ttattgaaat
     4321 ttctgtcttg attattgcct tgtccatcgc ggcggtggca gtatatattg ttttgttgtt
     4381 gaaaaaattg ggtacggtaa cggatgaagc ccagcaaacg cttaaggtct tgaccagcga
     4441 tgtcaatgtg actctctatc agaccaacga gcttttggct aaaaccaatg tcttagtcga
     4501 agatgtaaat ggtaaggttt cgacccttga tcctcttttt gtagcggtag ctgacttgtc
     4561 aacttctgta tcagatttga atgcttcagc gcgtgatttg acagtcaaag ccaagtctgc
     4621 tggagcaagt actgtaaaag ctggcggagc tctttcagct ctgtcaactc tctcatctct
     4681 cttaggtaag aaaggagaaa aaaatggtaa aaaaatctag tagcgtgtgg actagccttt
     4741 tgttaggggc agcaggcgga gctgctgcag ctgcttttct agcaagtaag actggtaaaa
     4801 cagtcaaaga aaaagttgta aactttgcta atgactataa agaaaaccat gaagaaatca
     4861 atgctgattt tgtcactaag gcacaagatt taggcaaaca agcgactgaa cgatttactg
     4921 aagtaaaaac tcaacttgaa actggtgaat tgacagtaga agatttggtc aagtctggta
     4981 aggaaaaatc cttggaaacc tttgagcaaa tcaaggaaaa aattgcggaa caaaacttgt
     5041 caacggctga cattttggaa gctatcaagg caaaaactgt taaagctccg acagtggatt
     5101 tgacagaaga agatattgag gatgctgtag ttgtgtctga agatattgag cttacaattg
     5161 atgatgtcat catcgaacct gtatcagaaa ccgtttcaga agtagcaagc gaaactgcct
     5221 cagaaacagt tgaaggataa aaagaaacta gcttagaaga ttctaggcta gttttgttat
     5281 ctgattatca tttgttttgt gtaaattaaa agcagataat ttcagggatt taatatgttt
     5341 gagtggatga agacaggaat ctataataaa gtagtt
//
LOCUS       DBNFCX010000114         5343 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.114, whole genome shotgun sequence.
ACCESSION   DBNFCX010000114 DBNFCX010000000
VERSION     DBNFCX010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 5343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5343
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.114"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..1790)
                     /locus_tag="AC1PJC_001985"
     CDS             complement(<1..1790)
                     /locus_tag="AC1PJC_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell surface protein"
                     /protein_id="HIP6620959.1"
                     /translation="MSKQKVVSSLLLSTVVLGGLAFYSTTTVKAESLETDVTSVSSGD
                     VVKKPVVSDGEESDFLAEEELEDDEPLEEELNEKAEEVTEPSSPEALLQPRAMMSDST
                     NSDMEEIPVDDSVSEKIADTPLIQTTNADSTNYKDSVEKEKFQKSVTIDSVKLEEKQI
                     TWRVNFDTSEWSFDRHNGGIYFILPQGLKLTSIKGNDSTELISKFPSKVESSNNKDGE
                     PYRYFSKEEDNTSFDNQWGWSAGQAPDDTVNRWKSENRLSKIYFIDKVKSTSQLTYNL
                     TAEMTDSNQKSFPLVVVMKSFRYKNSNRTEVTSLGAREITLVTPKETPLPPKEDPKQE
                     EPRQDTPEAPNPDSGIILKPLPKPEVPQTPKEEAPKEEPKQEVPQEPKEQPKETPQES
                     PTPGETQPEEPKKEEAPGQEVPKPMEPKVDKPTPEVPHVPDAPKDEPQVPSIPEEQPK
                     ETPKPEVPSTPEKQPEAPKEEPKQDAPQAPSTPKEEAPKEEVPAPEVPSVPEEKPMEV
                     PKPEAPKDTPEVSPKPEAPTEEPKKEDEPGQELPKPMEPKADKPTPEVPKQEDVQPEA
                     PKSDKAETDKPMPETKQPDVKQPKADDMPK"
     gene            complement(2079..2687)
                     /locus_tag="AC1PJC_001986"
     CDS             complement(2079..2687)
                     /locus_tag="AC1PJC_001986"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016817 - hydrolase activity, acting on
                     acid anhydrides [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009132 - nucleoside diphosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HIP6620960.1"
                     /translation="MTDQLQALLKDYQPQPLGEKRSYAVFLPLVWSDNQWQVLYEIRS
                     ESISQPGEVSFPGGGIDEGETAEEAAIREVIEELDIQQEQIELLGEIDYLVFGRSTIR
                     CFVGRLHLDWQTLQPNDEVARFFTVPLETLLKTAPVYYQLDSQIVPDCDFPFERLRGG
                     VDYPFSHRKRSVPFYENLPENIWGMTAQFTHRFTEIVKNNLS"
     gene            complement(2799..4331)
                     /locus_tag="AC1PJC_001987"
     CDS             complement(2799..4331)
                     /locus_tag="AC1PJC_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HIP6620961.1"
                     /translation="MSDVIAFGYGSSRAEMQLKRLNRHGIIAGATGTGKTVTLKVLAE
                     QLSDAGIPVFLSDIKGDLNSLVAANTKEIDSSRLEKTHYLDYSPVGYPVELWDVLGEN
                     GTPVRMTISELGPVLLTRLLGLNDTQESILNIVFSVADERGLLLIDLMDLRAMLNFVA
                     ENAAELSQYYGNIPARSVGAILRSLVVLEQQGGKIFFGEPSLDIADLMRTAEDGRGVI
                     NVLQATQLFNQPTLYSTVLLSLLSELYEVLPEVGDLDKPKMVFFFDEAHVLFKDAPKV
                     LLEKIELIVRLIRSKGVGVFFVTQNPTDIPDSVAAQLGNRIQHGLRAFTPKELKTVAT
                     VAETFRQEGDEDLGKVIQELQVGEAVVSTLQADGTPSFADRVLIYPPKSMLGTVEPSA
                     LLSVINNSPLMERYADAVNRESAHEQILAMTEAKEAELIKKAEQAEAEKQAEKEAKAA
                     AKMEEKAQKEAAKAAQKTSQPASRKTDSMMDRFTKNLMSQVGREVGRVVTRGIMGMLK
                     GK"
     gene            complement(4464..5309)
                     /gene="gla"
                     /locus_tag="AC1PJC_001988"
     CDS             complement(4464..5309)
                     /gene="gla"
                     /locus_tag="AC1PJC_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aquaglyceroporin Gla"
                     /protein_id="HIP6620962.1"
                     /translation="MDVTWTVKYITEFIATALLIIIGNGTVANVDLKGTKGNNSGWIL
                     IAIGYGLAVMMPALMFGNVSGNHINPAFTLGLAVSGLFPWEHVAQYIVAQLLGAMFGQ
                     LVIVTVYKPYFMKTENPNHILGSFSTISALDNGTKESRKAATTNGFLNEFVGSFVLFF
                     GALALTKHFFGSELVGKLIEQGYDKTVAETMTAPYTSGSIAVAHLGIGFLVMALVAAL
                     GGPTGPGLNPARDLGPRIVHALLPKSVLGENKADSKWWYAWVGVCAPIIASIAAVALF
                     KFLYL"
BASE COUNT         1368 a         1234 c         1050 g         1691 t
ORIGIN      
        1 tccttaggca tgtcgtctgc cttcggttgc ttcacatctg gttgcttagt ttctggcatt
       61 ggtttgtcag tttctgcttt atcagatttt ggtgcttctg gttggacatc ttcttgtttt
      121 ggaacttctg gtgttggttt atcagccttt ggttccatcg gttttggtaa ttcctgacct
      181 ggctcgtctt ccttcttagg ttcttccgtt ggtgcttccg gttttggtga aacctccgga
      241 gtatcttttg gcgcctctgg tttcggtact tccattggtt tttcttctgg tactgatgga
      301 acctctggcg ctggaacttc ttccttcggt gcttcctctt ttggagttga tggtgcttgt
      361 ggagcgtctt gttttggctc ttcctttgga gcttctggtt gcttttcagg agttgacgga
      421 acttctggtt ttggagtctc ttttggttgc tcctctggga ttgatggaac ttgcggctca
      481 tcttttggag cgtctggtac atgtggtact tctggtgttg gtttatcaac ctttggttcc
      541 atcggttttg gtacttcctg acctggcgct tcttccttct taggctcttc cggttgtgtt
      601 tctcctggtg ttggtgattc ctgaggagtt tcttttggtt gctcttttgg ctcttgtgga
      661 acttcttgct ttggttcttc cttcggcgct tcctcttttg gagtctgcgg cacttctggt
      721 tttggtaatg gtttcaagat aataccacta tctgggtttg gagcttctgg tgtatcttgt
      781 cttggttctt cttgttttgg atcctcctta ggtggtagag gggtttcttt cggagttaca
      841 agagtaatct cacgtgcacc tagcgacgta acctctgtac gattcgaatt tttgtaccta
      901 aaactcttca tcactactac aagtgggaat gatttttgat ttgaatcggt catttcagca
      961 gttaaattat aggtcagctg ggaagtagat tttactttgt ctatgaaata aattttagac
     1021 aaccgatttt ctgatttcca gcggttaacc gtgtcatcag gagcttgtcc tgccgaccag
     1081 ccccactgat tatcaaaact tgtattatcc tcttctttac taaaataacg gtacggttcg
     1141 ccatctttgt tgttagaact ttcaactttg ctaggaaatt tactaattaa ttccgtacta
     1201 tcatttcctt taatactagt taatttcaac ccttgtggaa gaataaaata aatacctccg
     1261 ttatgacgat caaaagacca ttcacttgtg tcaaaattta ctcgccatgt aatctgtttc
     1321 tcttctaatt tcaccgagtc tattgttact gatttttgaa atttctcttt ttctacacta
     1381 tctttataat tcgtactatc tgcatttgtt gtttgaatta gtggcgtatc agctattttt
     1441 tctgaaacag aatcatctac cggaatttct tccatatcgc tattagtaga atcactcatc
     1501 atcgcacgag gttggagaag tgcttcaggt gaagatggct cagtaacctc ttcggctttc
     1561 tcatttaatt cttcttccaa aggctcatcg tcttcaagtt cttcttcagc taaaaagtcg
     1621 ctttcctccc catctgatac taccggtttc ttaacaacat cacctgaact aactgatgta
     1681 acatctgttt ctagcgattc tgctttaacc gttgtcgttg aataaaaggc taatcctcct
     1741 aatacaactg tgcttaataa taaactggac acaactttct gcttgctcat aattggctcc
     1801 tttttaaaat atagatttat acattttcac actcatctac tgtaaatgat gacaactcct
     1861 tgaatgcgtt tacatgaata ttgtcacatt tctggataga tgatggtact tcaaaatatg
     1921 gaccgtacca agtataccag ccgcagctat cttttatctg ctacaaatct attttttgcg
     1981 tgtttttcta tacattgctc acgctgagct ttgtctccat tttttcgctg atacatatcg
     2041 caaaggctgg ttttccctca aaaaaataac ctatcatttc acgatagatt atttttcact
     2101 atttccgtaa aacgatgggt aaattgagcg gtcattcccc agatattttc tggtagattt
     2161 tcataaaatg gaacagagcg tttgcgatgg ctgaaaggat agtcaactcc tcctctcaag
     2221 cgttcaaagg gaaagtcaca atctgggaca atctgtgaat ccagttgata atagacaggg
     2281 gccgttttca gcaaggtttc cagtggaacg gtgaagaatc gagccacttc atcattgggt
     2341 tgaagggtct gccagtccaa gtgtagtcga ccgacaaaac agcgaatcgt cgagcgaccg
     2401 aaaacaagat aatcgatttc tcccagcaac tcaatttgtt cctgttgaat atcaagttct
     2461 tcgataacct cacgaatggc tgcttcttct gctgtctccc cttcatcaat tccgccacct
     2521 ggaaaggaaa cttctcccgg ttgagaaatg gactcgctcc gaatctcata taagacctgc
     2581 cactgattgt ctgaccagac taagggcaag aaaactgcat aagaacgttt ttcacccaat
     2641 ggctggggct gatagtcttt caataatgcc tgcaattgat cagtcatggc aactccttac
     2701 taactagtga tttacgttta ttttaacgaa ttttgtggca tctggcaaga actttgtcta
     2761 gataaaaaac tgagaagttt ccttctcagt ctagtcgttt atttcccttt taacatgccc
     2821 ataatgccac gagtcaccac gcgcccaact tcccggccga cttgactcat caggttcttg
     2881 gtaaaacgat ccatcatgga atctgttttg cgactggctg gctgactagt tttttgtgca
     2941 gctttagctg cttctttctg tgctttctct tccatttttg cggctgcctt agcttctttt
     3001 tctgcctgtt tttccgcctc ggcctgctct gcttttttga tgagttcggc ttctttagcc
     3061 tctgtcatgg ctaaaatctg ctcatgggct gactcacgat tgaccgcgtc agcatatctt
     3121 tccatcaaag gagaattatt gataactgac aagagggcgc ttggctccac cgttcccagc
     3181 atactctttg gaggataaat caatactcga tccgcaaagc ttggtgtccc gtcagcttga
     3241 agggtagaca caacagcttc ccccacttgc aactcctgaa tgaccttgcc caaatcctca
     3301 tcaccttctt gacggaaggt ttcagcaaca gtcgcgactg tcttaagctc ttttggtgta
     3361 aaggcgcgaa gaccatgctg gatgcggttg cccaactggg ctgccacgct atcaggaata
     3421 tccgtcggat tctgcgttac aaagaagaca cctacacctt ttgaacgaat caaacggaca
     3481 atcaattcaa tcttttcaag aagaactttt ggagcatctt tgaagagaac atgagcctca
     3541 tcaaagaaga agaccatctt aggcttgtcc aaatcgccca cctcaggcaa gacttcatag
     3601 agttctgata agagactgag aagaaccgtt gaatataatg ttggctgatt gaatagctga
     3661 gtagcttgga gaacgttgat taccccacga ccatcttctg ccgtacgcat caaatcagca
     3721 atatcaaggc ttggctcacc gaagaaaatc ttaccacctt gttgctccaa aacaaccaga
     3781 ctacgcaaga tggcaccaac cgaacgagct ggaatatttc cataatactg gctcagctct
     3841 gccgcatttt cagccacaaa attgagcata gcccgcaggt ccatcaaatc aatcaagaga
     3901 agcccacgct catctgctac actaaatacg atattcagta tagattcttg agtgtcattc
     3961 aagcccaaca aacgtgtcag taggacagga cccagctctg aaatggtcat gcggacagga
     4021 gtcccatttt cccccaagac atcccacaac tcaactggat aaccgactgg gctatagtca
     4081 agatagtgag tcttctctag acgactagaa tcaatctcct tggtattggc cgcaaccaaa
     4141 ctattcaaat cacccttgat gtccgacaga aagacaggga ttcccgcatc actcaactgc
     4201 tctgccaaga cctttaaggt cactgtcttc cctgtacctg tcgcacctgc gatgattcca
     4261 tgacgattga gtcgtttcaa ctgcatttct gctcgactgc ttccatagcc aaaagcaata
     4321 acatctgaca tattctagcc tcttttccga ttttttctag ctttattgta gcataacttt
     4381 taggaaaata gcagggcaga caaccgaatc acctcaatat ccataaaaca aacagaaaaa
     4441 cccgacgaat cgggttctct atattataga tacaagaatt tgaaaagtgc aacagcggca
     4501 attgatgcga taattggagc acatacacca acccaagcat accaccattt tgaatcagcc
     4561 ttgttttcac caagaacaga ttttggaaga agggcatgga cgatacgtgg accaaggtca
     4621 cgcgctgggt taagaccagg acctgttgga ccaccaagag ccgcaacaag tgccataact
     4681 aagaaaccaa tgcctaagtg agcaactgca attgaacctg aagtatatgg agcagtcatt
     4741 gtctcagcga ctgttttatc atagccctgt tcaatcaatt taccaaccaa ctctgaacca
     4801 aagaaatgtt tggtcaaagc aagggcaccg aagaacaata caaatgaacc aacgaactca
     4861 ttcaagaaac cattagttgt cgcagcttta cggctttctt tcgttccgtt atcaagcgcg
     4921 ctgattgttg agaatgaacc caaaatatgg tttggatttt ccgttttcat aaagtatggt
     4981 ttataaaccg ttacaataac caattgacca aacattgcac ctaacaattg agcaacgata
     5041 tactgtgcaa catgttccca tgggaagaga cctgatactg ccaatccgag ggtgaaggct
     5101 gggttgatgt ggtttccaga aacattacca aacatcaatg ctggcatcat aactgccaaa
     5161 ccataaccaa tcgcaatgag aatccaacca gagttgtttc cttttgtgcc ttttaaatca
     5221 acgtttgcaa ctgtaccgtt accaatgatg atgaggagtg cagtcgcaat aaattcagtg
     5281 atatatttca ctgtccatgt aacatccatg agtattttgt tccttccaaa ataataaatt
     5341 tta
//
LOCUS       DBNFCX010000115         5266 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.115, whole genome shotgun sequence.
ACCESSION   DBNFCX010000115 DBNFCX010000000
VERSION     DBNFCX010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 5266)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5266)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5266
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.115"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(6..1886)
                     /locus_tag="AC1PJC_001989"
     CDS             complement(6..1886)
                     /locus_tag="AC1PJC_001989"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016805 - dipeptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C69 family dipeptidase"
                     /protein_id="HIP6620963.1"
                     /translation="MKKTFVRIATFLMLVCLFPAQIVQACSGFIIGKGLTTDGSILYG
                     RTEDYPYPPDNGAHNKNYIVVPAASYAEGDMLVDETFGFTAPHLANEFKYTSTPDAAR
                     GDGSNGNYGAHGFNEKGVSMTATVTAIPNAKVLAVDPLVEAGGLGEPILIDYVLPRVT
                     SAREGVELIAKTIDEKGSAEGNIVIIADKNEVWYMEILSGHQYVAIKFPEDKYAIFAN
                     TYYLGHVDFTDTENVIASAKVEEVAKQADNYVTVDGQFHIAKSYGPATYAEADRSRVY
                     AGIKLMDPASPVTYEDAVYDLLRQPTDPSRRFSLQDTFALQRNRFEHLPEFRPDDEAG
                     KVKQGDNGANDQAADATYKYALGNENVIDAHVYQINSSLPSAFGGTVWLGLAQTRNTP
                     YVPFYGIVTDTYEAFKNRSASYDTNSWYWTVQNIDKMAISHPELFGTSIQEKWIALES
                     EWIAAQAALDAQYAGLSEDAAVALAPAVTEETLARSAEIFAQLKAVEAEMMAKIEAAT
                     TPSSSSTDSSSSTEPSTSTEPSSSSTEPSTSTEPSSSGTETSTSTSQSTSASDTGGAT
                     DTSSSSGTVVSSDKKVTPTNKKGKSSLPSTGEQVSLLLVALGVAGILTAIFLHRKKSS
                     KE"
     gene            complement(2079..2939)
                     /gene="tehB"
                     /locus_tag="AC1PJC_001990"
     CDS             complement(2079..2939)
                     /gene="tehB"
                     /locus_tag="AC1PJC_001990"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0046690 - response to tellurium ion
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase TehB"
                     /protein_id="HIP6620964.1"
                     /translation="MTVLVPYKRMPIWNQDTVPQHFLTKHNTKVGTWAKIKVLRGQLK
                     FEPISDDNEILGEFVYGTTDDVPFVEPQAWHRVTLLTEDTEFFLEFFCQPEDYFAKKY
                     DYTRTHSEVLEALKIIEPCKVLDLGCGHGRNSLYLAQQGFEVTAVDKDVPSIRTLLQV
                     KEVEDLDLQAGTYDINSASLEQDYDWIISTVVFMFLERDRVPAIIRNMQEQTRPGGYN
                     LIVAAMDTEDAPCPMNFSFTFGAGELKEYYRDWELVKYNEDFGQLHKRDENGNFLKMR
                     FATMLARKNV"
     gene            3093..4136
                     /locus_tag="AC1PJC_001991"
     CDS             3093..4136
                     /locus_tag="AC1PJC_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HIP6620965.1"
                     /translation="MKTAIYEKAGKMTVAEVEKPSLQAKDDVIIKVVRACVCGSDLWG
                     YGEDIHHDHGDTNSGHEAIGIVEEVGEDITTLVPGDFVIVPFTHGCGHCDACRAGFDG
                     TCDNHPGYTNWGNNYQSQYIRFHYGNWALVKIPGQPSDYSEGMIKSLLTLADVMPTGY
                     HAARVADVKPGDKVVVIGDGAVGQCAVIAAKMRGASQIVMMSRHADRQQMALESGATA
                     IVAERGEEGIAKVREILGGGADAALECVGTEASIDQALGVLHNGGRIGFVGVPHYNNH
                     ALGSTFAQNIIIGGGSASVTTYDKEILLDAVLKGDINPGRVFTQTYSLDNIDQAYKDM
                     ANRKTIKAMITVD"
     gene            complement(4297..4746)
                     /locus_tag="AC1PJC_001992"
     CDS             complement(4297..4746)
                     /locus_tag="AC1PJC_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000961815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HIP6620966.1"
                     /translation="MLVTYPALFYFDDTDGANAPYFVTFPDFEYSATQGEDMADAMAM
                     ASDWLGMNLADYIENGRDIPTPSSINTLSLVDNNPFRNEDFEMVYDSSKSFISMVMVD
                     VAKYLGSQEPVKKTLTIPRWADTLGRELGLNFSQTLTDAIADKKIHA"
     gene            complement(4784..4966)
                     /locus_tag="AC1PJC_001993"
     CDS             complement(4784..4966)
                     /locus_tag="AC1PJC_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002961998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003729 - mRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HIP6620967.1"
                     /translation="MPMTQKEMVKLLTAHGWIKTKGGKGSHVKLEKAGERPITIPHGE
                     INKYTERGIKKQAGLL"
BASE COUNT         1495 a         1205 c         1057 g         1509 t
ORIGIN      
        1 ttcatttatt ctttactgga ttttttccga tgaagaaaaa ttgctgttaa aattcctgca
       61 acacctagcg ccaccaacaa gaggctgact tgctcacctg tactaggaag acttgattta
      121 ccttttttat tggtaggtgt tactttctta tcagaagaca ctactgttcc gcttgaggag
      181 gaagtatccg tagctcctcc tgtgtcagaa gcacttgtag actgacttgt actggttgaa
      241 gtttcggtac cacttgatga tggctcagtg ctggtcgatg gttcagtact acttgatgat
      301 ggttcggtac tagtggatgg ttcagtacta cttgatgagt cggtgctgct ggatgacgga
      361 gttgttgctg cttcaatttt tgccatcatt tcagcttcaa cagcttttag ttgggcaaaa
      421 atctctgctg aacgagccaa ggtttcctcg gttacagctg gagccagggc tacagctgca
      481 tcttctgaaa gtccagcata ttgagcatca agagcagcct gtgcagcaat ccattcactt
      541 tcaagagcaa tccatttttc ttgaatcgat gtaccaaata actctgggtg tgagatggcc
      601 atcttatcaa tattttgtac cgtccagtac catgaattcg tgtcgtaaga agctgagcga
      661 tttttaaagg cttcataagt atcagtcaca ataccataaa atggaacata cggtgtattc
      721 cttgtctgag ccaagcccaa ccagactgtg ccaccgaaag ctgatggtaa gctgctattg
      781 atctgataaa catgggcatc gatgacgttt tcattaccaa gagcgtattt ataagtcgca
      841 tctgctgctt ggtcattcgc accattatcc ccttgtttta ccttgcctgc ttcatcatct
      901 ggacgaaatt ctggaagatg ttcaaaacgg ttacgttgta aggcaaaggt atcttgtaaa
      961 ctaaagcgac gacttggatc tgttggctga cgtagcaaat catacacagc atcttcatag
     1021 gttacaggcg atgctggatc catcaattta atacctgcat acacacggga acggtctgct
     1081 tcagcataag ttgcaggacc gtatgattta gctatatgga actgtccatc gactgtcaca
     1141 taattatccg cttgtttggc tacttcttca acctttgcag aagcaatcac attttctgta
     1201 tcggtaaaat caacatgacc tagatagtaa gtatttgcaa aaattgcata cttatcttca
     1261 gggaacttga tggctacgta ttggtgtcct gacaaaattt ccatgtacca aacttcattt
     1321 ttgtcagcaa taataacaat attcccttct gctgagcctt tttcatcgat tgtctttgca
     1381 atcagctcaa caccttcacg cgcactagtg accctaggaa gaacataatc aatcaaaatt
     1441 ggttctccca gccctccagc ttcaactaga ggatcaactg ccaagacttt agcatttgga
     1501 atagctgtta cagtagcagt catggatacg cctttttcat taaaaccatg cgccccataa
     1561 ttaccatttg aaccatcccc acgcgccgcg tcaggcgtag aggtatactt gaactcattt
     1621 gccaaatgtg gtgctgtaaa accaaatgtt tcatccacca acatatctcc ctcagcatag
     1681 cttgctgctg gaaccacaat ataattttta ttgtgcgcac cattatctgg tggataggga
     1741 taatcttccg ttctaccata aaggatagaa ccatccgttg tcaacccttt accaatgata
     1801 aagcctgaac aggcttgaac aatttgggca gggaataggc aaaccaacat tagaaatgtg
     1861 gctatacgaa caaaagtctt tttcatagac ttctcctttc ctgatactct gtgaaaatca
     1921 gaagtaggct ccttccaaag ataggaatcc agagactatt ttacacaagc ctccgaccca
     1981 aacagaaggt gattttcgtg gagtataata tgatttaccc atttgcacct acattgtaac
     2041 gcaaaaacac ttgccttgca agtgctttca gatatatttt acacattttt tctagccaac
     2101 atggtcgcaa accgcatctt aaggaaattg ccattttcat cccgcttatg gagttgacca
     2161 aaatcttcat tgtatttgac cagttcccag tcacggtagt attccttcaa ctcgcctgct
     2221 ccaaaagtaa aggagaaatt cataggacag ggcgcatctt ccgtatccat ggccgccaca
     2281 atcaagttat agccaccagg tcgtgtctgc tcctgcatat tgcggataat ggctggcacc
     2341 cgatcccgct ccaagaacat aaagaccact gttgagataa tccagtcgta gtcctgctcc
     2401 agactggctg aattgatgtc ataggtccca gcctgcaagt ccaaatcttc tacttccttg
     2461 acctgcaaga gggtccgaat acttggcaca tccttatcaa ccgccgtcac ctcaaatccc
     2521 tgctgagcca agtaaagact gttacgacca tgaccacagc ccaagtccaa gaccttacaa
     2581 ggctcgatga ttttcaaggc ctccaagact tccgaatgcg tccgagtata gtcatacttt
     2641 ttggcaaaat agtcttctgg ttgacagaaa aattccaaga aaaactccgt atcctctgtc
     2701 aacaaggtca cccgatgcca agcctgtggc tcgacaaagg gaacatcgtc tgtcgtacca
     2761 tagacaaatt ctcccaaaat ctcattatca tctgaaatcg gctcaaattt aagttgacct
     2821 ctcaagacct tgattttggc ccaagtaccc accttggtat tgtgcttggt caaaaaatgc
     2881 tggggaaccg tatcctgatt ccaaatgggc atgcgtttgt aaggaactaa aacagtcatc
     2941 atctctcctt ttctttccga tacacttagt ctatcacaaa ggaaatatga attcaaaccc
     3001 atttttttct tgacttggag tgaactccaa ggtgtataat attccatatc aatcagaaag
     3061 gatatttact gacaagtaaa tgtgtgatga atatgaaaac agctatttat gaaaaagccg
     3121 gtaagatgac cgttgctgaa gtcgaaaaac caagccttca agccaaagat gacgtcatta
     3181 tcaaggtagt tcgggcctgt gtctgtgggt cggacctttg gggctacgga gaagacattc
     3241 accatgacca cggtgacaca aactctggtc atgaagccat cggtatcgtt gaagaggtag
     3301 gcgaagacat tacaacactt gttcctggtg acttcgttat cgttccattt acacatggtt
     3361 gcggacactg tgatgcctgt cgtgctggct ttgacggtac ttgtgacaac catccaggct
     3421 acaccaactg gggcaacaac taccagtctc aatatattcg tttccactac ggcaactggg
     3481 ccttggtcaa aattcctggt cagccaagtg actactcaga aggcatgatc aaatcactct
     3541 tgactctggc agatgttatg ccaacaggct accatgctgc gcgtgttgca gatgtcaaac
     3601 ctggtgataa ggttgttgtc atcggtgatg gtgcagtggg tcaatgtgct gtaattgctg
     3661 caaaaatgcg cggagcttct cagattgtca tgatgagccg tcacgcagac cgccagcaaa
     3721 tggctttgga atcaggggct actgccatcg tagcagaacg aggcgaggaa ggaattgcca
     3781 aagtccgtga aattcttgga ggtggcgctg atgctgccct tgaatgtgtc ggaacagaag
     3841 cttctattga ccaagccctc ggcgtgcttc acaatggtgg tcgtatcggt tttgtcggtg
     3901 tgccacacta caacaaccac gcccttggct caacctttgc tcaaaatatc attatcggtg
     3961 gtggctctgc ttctgtcaca acctatgata aggaaatttt gctcgatgct gttctcaaag
     4021 gcgacatcaa cccaggtcga gttttcaccc aaacttacag cctggacaat atcgaccaag
     4081 cctacaaaga catggccaac cgaaaaacta ttaaagctat gattacggtg gattaagaaa
     4141 atagaacaaa acccctgaag ttcattacat aaacttttgg ggttttgtat aatttataga
     4201 aagataaaaa cggaaccatc ccactcatta gaactactaa tactcaacgg gagtagaaag
     4261 gtccagtttc aacatttgca ataacagaag caagtgttaa gcatgaattt ttttatctgc
     4321 aattgcatcc gtgagggtct gtgagaaatt caatcctagt tcacgtccta gagtatctgc
     4381 ccagcgtggg atagtgagtg ttttctttac tggctcttga ctgcccaaat actttgcaac
     4441 gtccaccatc accatggaga taaaagactt gctagaatcg taaaccatct caaaatcctc
     4501 attacggaaa gggttattat ctactaatga caaagtgttt atagaagacg gggtaggaat
     4561 gtctcttcca ttctcgatat aatcagctaa gttcatgcct aaccaatcgc tagccattgc
     4621 catagcgtcc gccatatcct cgccttgagt tgctgaatac tcaaaatcag ggaaagttac
     4681 aaagtaaggg gcgttagctc cgtctgtatc atcaaaataa aataaagctg gataagtgac
     4741 aagcatagtt tacctccaaa agaaaacaag cggtaggctg ttgttataac agccctgctt
     4801 gctttttgat acccctttcg gtgtatttgt ttatttcacc gtggggaatg gttataggtc
     4861 gctcgcctgc tttttcaagt ttcacgtgtg accccttacc gcctttggtt tttatccaac
     4921 catgggcggt aagtagctta accatttctt tttgtgtcat aggcatagcg cttttacctc
     4981 ctgacaagat tattatacca tacgtattac acgtgttcaa ctataaagaa tcagaaaatg
     5041 tctgaaattt gtgactgata ctcaatgaaa atcaaaataa aaaaaagaca gttcagtaaa
     5101 caaactgaac tgttctatat tttaagacac attatttcca agttcttaat tctgtccatc
     5161 cgatcgcatt actaatagta taagtctttc cagcgttgac atacttattc gtacctagat
     5221 atctcacctt aagatcgtac tcattcaaat tataactagc ttttac
//
LOCUS       DBNFCX010000116         5260 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.116, whole genome shotgun sequence.
ACCESSION   DBNFCX010000116 DBNFCX010000000
VERSION     DBNFCX010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 5260)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5260)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5260
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.116"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(169..651)
                     /locus_tag="AC1PJC_001994"
     CDS             complement(169..651)
                     /locus_tag="AC1PJC_001994"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HIP6620968.1"
                     /translation="MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKL
                     EPGETPQACAIREVFEETGLTVTKHALKGVITFPDFTPNTDWYTYVFKITGFEGSLID
                     CNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLEDKPFFSACFRYDGDKLLDYSVDFYEE
                     "
     gene            818..1381
                     /gene="folE"
                     /locus_tag="AC1PJC_001995"
     CDS             818..1381
                     /gene="folE"
                     /locus_tag="AC1PJC_001995"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HIP6620969.1"
                     /translation="MSKQEQIEQTIYQLLELLGEDPNREGLLDTPKRVAKMYLEMFNG
                     LEEDPKDQFTAVFSEGHEEVVLVKDIPFHSMCEHHLVPFYGIAHVAYIPSKGRVTGLS
                     KLARAVEVASRRPQLQERLTHQVAHALQDALEPEGVFVMVEAEHMCMSMRGIRKPGSK
                     TVTTVALGKYKEDAILRRELLSMIHNK"
     gene            1390..2202
                     /gene="folP"
                     /locus_tag="AC1PJC_001996"
     CDS             1390..2202
                     /gene="folP"
                     /locus_tag="AC1PJC_001996"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HIP6620970.1"
                     /translation="MSIEQLANQVTIMGILNVTPDSFSDGGHYNEVEAALVQVEKLLA
                     EGATVIDVGGESTRPGATFVSEEDEIARVVPIIRAIKENYDCLVSVDTYKTGTARAAL
                     EAGADILNDVWAGLYDGDMLALAAEYKVPIILMHNQKEESYADVVGEVKNFLAERAQA
                     ALDAGVSADQIWLDPGFGFSKNVQHNLDLLQGLEQITALGYPVLFGISRKRVVDYLLG
                     GNSLPTDRDQATAALSAWAVQKGCKMVRVHNVAANRDIVKVWDQLTSGGQHG"
     gene            2195..2557
                     /gene="folB"
                     /locus_tag="AC1PJC_001997"
     CDS             2195..2557
                     /gene="folB"
                     /locus_tag="AC1PJC_001997"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HIP6620971.1"
                     /translation="MDKISLNKCRFYGYHGAFKEEQVLGQIFTVDCDLFVDLTAASQT
                     DNLEDTVHYGMVFETIKAVVEGKPYILIEKVAGVICQEIFDQFPKVEKIRLAIYKENP
                     PIAGHYDSVGIELERERP"
     gene            2554..3042
                     /gene="folK"
                     /locus_tag="AC1PJC_001998"
     CDS             2554..3042
                     /gene="folK"
                     /locus_tag="AC1PJC_001998"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HIP6620972.1"
                     /translation="MKHLAYLSIGGNMGNRQAYLQAALDKLASHPGCQLGLVSNIYET
                     PAWGKTDQADFLNLACQVYTDLSAQEFLSVCQNIEQELDRVRIEKWGQRTIDLDIIFW
                     DEEKIQEENLIVPHPYAHERAFVLKPLAEIASDYCHPILKKVVSDLLAELGEQKDINI
                     FK"
     gene            3093..4403
                     /locus_tag="AC1PJC_001999"
     CDS             3093..4403
                     /locus_tag="AC1PJC_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HIP6620973.1"
                     /translation="MTILATLGVLLAIVAIIYWTSKNLHVIIAAPLASLIIILTNQMN
                     VLEVMLGKEQSYMAGLAGFLINNFAIFMLGSILARYMEASGATQTIANSILKVMGKDS
                     PYKGLLAITLIASILTYGGVSIFVVIFTLLPLSRPLFKELNINWALFPIPVFLGAGTY
                     TMTTLPGAPSIQNVIPTKVLGTSLTAAPIISLAASLTLLVFGLLYMAYCLKKSLANGE
                     TYTEEEDETAVVVADKTPNLFLSVLPLFSLIGTIFLMSKTPNVLAIGLLVSILLSALI
                     FYPYLPNQKEILNAATTASIVPAFATSSTVAFGTVLTLSAGFAVIQEWIQQIPGSPLI
                     SLSVSTALVSGIIGSSSGAVGIASSNFLPAYLEMGINPELLHRVVVVASAILTVVPQS
                     GVMITFHNLSKLSMKRGLKYSFILVTVGHLLALLVILLLAPLLY"
     gene            4665..5260
                     /locus_tag="AC1PJC_002000"
                     /pseudo
     CDS             4665..5260
                     /locus_tag="AC1PJC_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935295.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA];
                     GO_process: GO:0032196 - transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
BASE COUNT         1476 a         1057 c         1177 g         1550 t
ORIGIN      
        1 gactggtcaa taaagagttc gtcttcccac ccccgcacag ttgattaggt cagatttgga
       61 gtgtgcaaca cgaccaaatc tgccaatcaa ccactgcgct gagatgttga cactaacgtt
      121 gagaagcggt gctgggcttg agctcagcct ttttcgtttt ttattagctt attcttcata
      181 aaaatcaaca ctataatcaa gcagtttgtc cccatcatag cggaagcaag cggaaaaaaa
      241 tggtttgtcc tctaatagcc attcttgaaa atgccgatca ccctcccagg ttggtttgga
      301 caagacttgg tcatagggaa cccattctaa atctccttca ttgcagtcaa taagacttcc
      361 ttcaaaacct gttatcttaa agacataggt ataccaatct gtatttgggg tgaagtctgg
      421 gaaggttatc actcctttta gagcatgctt tgttacagta agcccagttt cctcaaagac
      481 ttcacgaata gcgcaagcct gtggtgtttc gccaggttcc agcttgccac cgaccccaat
      541 ccattttcct tgatggacat cgttttcttt cttgtttcga tgaaggagaa gaaattcctt
      601 gccattatca atgtagcaaa tcgtagcgag ttggacgggt ttcttggtca tagaggctcc
      661 ttgtagttga tttatcctat tataccacaa aggtgggagt agggacacct gcttggtgct
      721 ctggtagggg acagttttgg gattagcata ctgaaagccc ttttctgaaa acagtttttg
      781 aagtataata agaacatcaa actatttagg atgcactatg tcaaaacaag aacaaatcga
      841 acaaacaatt tatcaattat tggaattatt gggtgaggac ccgaatcgtg aaggtttatt
      901 agatacgcct aaacgggtcg ctaagatgta tttagaaatg tttaacggcc tagaagagga
      961 tcccaaagac caatttacag ctgtcttttc agaaggtcat gaagaggttg ttttggtcaa
     1021 ggatattcct tttcattcta tgtgtgaaca ccatttggta cccttttatg gcattgccca
     1081 tgtagcttat attccgagta aggggcgtgt gacaggtctt agcaaattgg cgcgtgcagt
     1141 ggaggtagca agtcgtcgcc ctcaattgca ggagcgttta actcatcaag ttgctcatgc
     1201 acttcaagat gcccttgaac cagaaggcgt ttttgtcatg gtcgaagcag agcatatgtg
     1261 catgagtatg cgtggtattc gcaagccagg tagtaagaca gtgaccacag ttgcccttgg
     1321 aaaatacaag gaagatgcca tcttgcgccg tgaactcttg tccatgattc acaataaata
     1381 ggaggttcta tgtcaatcga acagttagcg aatcaagtaa ccattatggg gattctcaat
     1441 gtgacgccag attcattttc agatggtggt cactataacg aagtagaagc agccctggta
     1501 caagtagaaa agttgttggc tgagggtgct accgtcattg atgttggtgg tgagtccact
     1561 cggccaggtg caacatttgt gtctgaagaa gacgagattg ctcgcgtggt tccgattatc
     1621 cgcgctatca aagaaaacta tgactgtctt gtcagcgtcg atacctataa aacaggaact
     1681 gcacgtgcag ccttggaagc aggtgcagat attttaaatg atgtctgggc aggactttat
     1741 gatggagata tgttagccct ggctgcggag tacaaggtac caattattct catgcacaac
     1801 cagaaagaag aaagctatgc ggatgttgtt ggagaggtca aaaactttct agctgagcgt
     1861 gcccaagcag cacttgatgc aggtgtttcc gcagaccaga tttggttgga tccaggattt
     1921 ggtttttcaa agaatgtcca acataacctt gatctcttac aaggtttgga acagattact
     1981 gctcttggtt atcccgttct atttggaata tctcgtaagc gcgtggtaga ttatctgctt
     2041 gggggaaata gtttaccaac tgaccgcgat caagcaacgg cagccttgtc tgcctgggca
     2101 gttcaaaaag gttgcaaaat ggtccgtgtc cacaatgtcg ctgccaaccg tgacatcgtt
     2161 aaagtttggg accaattgac ttctggaggt caacatggat aagatttctc tcaataaatg
     2221 tcgcttttac ggctaccatg gtgccttcaa agaagaacaa gttcttggtc aaattttcac
     2281 agttgactgt gatttgtttg ttgacctgac agcagcttca caaactgaca atttagaaga
     2341 cacagttcac tatggtatgg tcttcgaaac cattaaagca gttgtggaag gcaagcccta
     2401 catccttata gaaaaggtag caggtgttat ttgtcaggag atttttgatc aatttccaaa
     2461 ggtggagaag attcgcttgg ccatttacaa ggaaaatcca cccattgctg gacactatga
     2521 ttctgtcgga atcgaattgg agcgtgaacg accatgaagc atctagccta tctcagtatc
     2581 ggagggaaca tgggcaaccg acaagcctat ttacaggcag ccctagacaa attagccagt
     2641 catccaggtt gccagcttgg cttagtttcc aacatttatg aaactccagc ttggggcaag
     2701 accgaccagg ctgatttcct caatctagcc tgtcaagtgt atactgattt gtctgctcag
     2761 gagtttctaa gcgtttgcca gaacatcgaa caagagttgg accgagtacg gattgaaaaa
     2821 tggggccaac ggaccattga tttggatatt attttttggg atgaggagaa gattcaagaa
     2881 gagaatctga ttgttcctca tccctacgcc catgaaagag catttgttct caaacctctt
     2941 gctgagattg cttctgatta ctgtcaccca attttgaaaa aagtggtatc ggacttgctt
     3001 gcagaactag gggaacaaaa agatataaac attttcaaat agttgcctct gatactaggt
     3061 ttattagagg atagaataga taaaggagtt ttatgacaat tttagcaact ttaggagttt
     3121 tattggctat tgtagccatt atttattgga catcaaaaaa tttacatgtt atcattgctg
     3181 caccactcgc tagtttaatc atcattctga ctaatcagat gaatgttttg gaagttatgt
     3241 tgggcaaaga gcagtcttat atggcgggct tagcaggttt tttgattaat aattttgcca
     3301 tctttatgtt ggggtctatc ttggcacgtt atatggaggc aagtggagcc acgcagacga
     3361 ttgccaatag cattttgaaa gtaatgggaa aagatagtcc ctataagggc ttgttagcca
     3421 tcactttgat tgcttccatt ctgacctatg gtggtgtgag tatttttgta gttattttta
     3481 ccttgcttcc cctttcacgc ccccttttta aagagttgaa tatcaactgg gcactttttc
     3541 cgattcctgt ctttttggga gcaggtacct atacgatgac aactcttcct ggggcacctt
     3601 ccatccagaa tgttattccg acaaaagttt tgggaactag cttgaccgcg gcacccatta
     3661 tcagtttggc agccagcttg acactattag tatttggctt gctctacatg gcctactgcc
     3721 tcaagaaaag tctagcaaat ggagagacgt atacggaaga agaggatgaa actgcagtag
     3781 tggtagctga taagacacca aatctatttt tatcagtctt gcctctattc agtcttattg
     3841 ggacgatttt cctaatgagt aaaactccga atgtcctggc aatcggattg ttggtctcta
     3901 tccttctatc agccttgatt ttttatccat atctgccaaa tcaaaaagaa attttgaatg
     3961 ctgcgacaac agcatctata gtacctgctt ttgcaacttc tagtacagta gcatttggga
     4021 cggtgttaac cttgtcagca ggttttgcag tcattcaaga atggattcaa caaataccag
     4081 gatcgccgct gatcagttta tctgtttcga cagcattggt tagtggtatt atcggttcct
     4141 cttctggtgc agtaggtatt gcttcaagta acttccttcc tgcctattta gaaatgggga
     4201 ttaatccaga gttgctgcat cgtgtagtag tagttgcatc agctatcttg acagttgtgc
     4261 ctcaatctgg cgtgatgatt accttccata atctatcgaa attaagtatg aaacgtggac
     4321 tcaagtattc atttatccta gtgacagttg ggcatttgtt agccttactt gtgattttac
     4381 tgttggcgcc tttgctatat taggattgat taacaaacaa aaacatacta agattagtag
     4441 tgaggaaatc tccgacggga gaaagtactc actacttttt ctttatgata aagtagaggt
     4501 gtcttgttaa gtcgagaact cttttgacgc tagacgtcgc aacaaaaact ggcaagacac
     4561 ctgttttaga aagaatgtta tcaaagtatg tgggacgcca gacgtcgagt attgaaaatg
     4621 acatcactaa aacaaggaat cattcaagac aaagaggtaa tatcatgcgt gcagtttttg
     4681 ggattgatgt gagtaaggca agttcagaag tggccattct agtcaatggt agttcatggc
     4741 tataccatat ccaatgacgc catcggcttt gctcggctac ttggcgattt gaaaaccgtc
     4801 cacaagccag aaatcatctt tgaagcaaca ggcgtctatt ctcgtcgtct tcaatctttt
     4861 ctggatgaac atggctacgc ttatacacga ctcaatccct tagaagccaa gaagcaactg
     4921 gatagcttgc gtgtgcggaa aacagatcaa attgacgccg aaaaactagc tcaatctcag
     4981 tttgtactga atcgtaaaac gacgtatgtc caagaagaag tctaccaaaa cttgcgggat
     5041 ctcagccgtt tctatcagaa tctgaccgag gacatcgttc gagctaaaaa ccgcctgcac
     5101 aaggccttac aggtcacctt ccctgaattg gaaaatatct tgtcaacacc aactggtgaa
     5161 caatactgga acttagttat agcttttcct tgtaaggact tcgtgcttga gttaagcaag
     5221 gataaactct cagaaagcat tcgtcaatcc acttcaaaac
//
LOCUS       DBNFCX010000117         5209 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.117, whole genome shotgun sequence.
ACCESSION   DBNFCX010000117 DBNFCX010000000
VERSION     DBNFCX010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 5209)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5209)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5209
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.117"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..1109
                     /gene="cps2T"
                     /locus_tag="AC1PJC_002001"
                     /gene_synonym="wchF"
     CDS             <1..1109
                     /gene="cps2T"
                     /locus_tag="AC1PJC_002001"
                     /gene_synonym="wchF"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="beta 1-4 rhamnosyltransferase Cps2T"
                     /protein_id="HIP6620974.1"
                     /translation="KYGGFETFVQQLVSHQQSEKICYHVACLSDTSHRQHSTYLGADC
                     FTINPPKLGPARVIAYDMMAITYALKIIKEQQIERPIFYILGNTIGGFIVPFAKQIHS
                     VGGTLFVNPDGLEWKRAKWAKSVQRYLKFSEKMMVKYADLIIADNEGIEDYIQSEYSA
                     TNTRFIAYGTDLSPTKLTKESEQVRQYFTNWNIKEKEFYLIIGRFVPENNYVTAIREF
                     MASNTRRDLVIVANHEGSAYFQKLKDETGFISDKRIKFVGTVYDQELLKYLRQECRAY
                     IHGHEVGGTNPSLLEALAQTNENLVLGVDFNRKVALEGARYWSKESGSLSQLINQIDE
                     NAEAVELGEIAKKHMKDEYTWEKIVQEYEELFLQ"
     gene            1106..2035
                     /locus_tag="AC1PJC_002002"
     CDS             1106..2035
                     /locus_tag="AC1PJC_002002"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006486 - protein glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HIP6620975.1"
                     /translation="MKVNILMSTYNGQQFLAEQIRSIQEQTYTDWTLFIRDDGSSDRT
                     REIIKDFVEQDQRIHFIDVETDENLGVIKSFHRLVHYDTADFYFFSDQDDVWLPNKLE
                     VSLKKAQAYPTNLPLMVYMDLKVVNQNLEVMAESMVKSQSHHANTELVQELTENTVTG
                     GVAMINHHLAEMWQVTEDILMHDWYLALLASAFGNLVFIDQPGELYRQHSDNVLGART
                     LSKRFKKWICPHILFAVYWDLIKNSQKQARHLLQMPLSQSNRESIEAFVTIMDKPMLE
                     RFRILRKYGLRKNKAFHTLVFTTLIITKFAYKE"
     gene            2038..2844
                     /locus_tag="AC1PJC_002003"
     CDS             2038..2844
                     /locus_tag="AC1PJC_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIP6620976.1"
                     /translation="MNLLNRENQILLKEMVKTDFKLRYQGSLIGHLWSILKPLLLFTI
                     MYLVFVRFLRFDDGTPHYAVSLLLGMVTWNFFTEATNMGMMSIVSRGDLLRKLNFSKE
                     IIVFSSVAGAAINYAINLMVVFVFAAINGVPFTWSVLVIIPLFFELALLATGIAFILS
                     SLFVRFRDIGPIWEVFLQAGLYATPIIYSLTFILQRGQVTFAKLMMLNPVAQIIQDLR
                     HFIVYSGNTTVSELIENPVIVAIPYILPVVVYLLGITVFRKNAKKFAEIL"
     gene            2844..4058
                     /locus_tag="AC1PJC_002004"
     CDS             2844..4058
                     /locus_tag="AC1PJC_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6620977.1"
                     /translation="MVKNNNIAVKVEHVSKSFKLPTESSQSLRTTLVNLFKGIKGYVE
                     YNVLQDISFEVEKGDFFGIVGRNGSGKSTLLKILSQIYVPERGTVAVDGKLVSFIELG
                     VGFNPELTGKENVYLNGAMLGFTAEEIDAMYDDIVEFAELSEFMNQKLKNYSSGMQVR
                     LAFSVAIKAQGDILILDEVLAVGDEAFQRKCNDYFLERKKSGKTTILVTHDMGAVKKY
                     CNKALLIEKGYVKALGEPDDVANQYSFDNVLASISEVTENEEPLHQSDIVKDLQINLV
                     SKNQIEPDESIEIEFRYTVLEDIETHIAFTFLDLERHFDVYNDNSMDLKTFGKGEKFF
                     RVKCKLPSINQAKLKMAVSVRNSNKQPLLFAKTSDTPAIFISRKFSTDNIAEEDAATG
                     FIQRNSQWELLD"
     gene            4079..>5209
                     /locus_tag="AC1PJC_002005"
     CDS             4079..>5209
                     /locus_tag="AC1PJC_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnan synthesis F family protein"
                     /protein_id="HIP6620978.1"
                     /translation="MSRLLVYVHYNKYNVVSEYIYYQLKSIRSIYSDIVFVSNSHVSK
                     DIVQYLQSERLIDFFIQRDNIGYDFAAWKEGLNQVTFYQYDSVTLMNDTCFGPLWDLE
                     DYYSQFDSDVDVDFWGMTNHLETKIDSVVVPEHLQSYFMVFKKRILQSQAFVGFWSSV
                     SELTDIQDVIKLYESQLTKILLSEGYSYKCVLDTSICCKTLENSNITLEYPEVILKNN
                     VPFIKIKSFTEYPDRIYSLLHLIRMKTKYPVELIERHLRQIIIPGTSFIPQIRVSQTT
                     ETVRSSTSVLLHVHIESVSIFEEYIEELCKIADRCQLLITLPEADFSNKCSIVERCLF
                     TYQLRAQIVKVTDELQFFEIVNNYMGDAKYLAHITVKQTNETK"
BASE COUNT         1696 a          788 c         1059 g         1666 t
ORIGIN      
        1 caaaatatgg tggctttgag acctttgtcc aacaattggt cagtcaccag caatctgaga
       61 agatttgtta tcatgtggct tgtttatcgg atacaagtca tcgccaacat tcgacctacc
      121 tgggtgcaga ttgcttcacc attaatccac caaaacttgg accagctcgt gtgattgctt
      181 atgatatgat ggcaatcact tatgccctta aaatcattaa ggaacagcag atagagcgac
      241 caattttcta tatcttggga aataccatag gtggcttcat agtacctttt gcgaaacaga
      301 ttcactctgt tggaggtacc ttgtttgtca atccagatgg tttggaatgg aaacgggcca
      361 agtgggctaa gtcagtccaa aggtatctaa aattttctga aaaaatgatg gtcaaatatg
      421 ctgatttgat tattgctgat aatgagggaa ttgaggatta tattcaatct gaatactcgg
      481 ctaccaatac acgctttatt gcctacggta cagatttaag tccgactaag ttaacaaaag
      541 aatctgagca agttcgccaa tattttacaa attggaacat taaagagaaa gaattttatc
      601 tgattatcgg tcgttttgta cccgagaata actatgtgac agcaattcgg gagtttatgg
      661 caagcaacac gagacgtgat ttagtcatcg tggcaaacca tgaaggctct gcctattttc
      721 aaaaattgaa agatgagaca ggctttatat ccgataagcg gattaagttc gtaggaacag
      781 tatatgacca agaactactt aagtatctgc gccaagaatg tcgagcttat attcatggac
      841 atgaagttgg aggaaccaat cctagtctcc tagaagcgct ggcgcaaacc aatgaaaatt
      901 tggttttagg tgttgatttt aaccgcaaag ttgccctaga aggtgctcgg tattggagta
      961 aggagtcagg tagcctgagt caattaatta accaaattga tgagaatgct gaagcggtgg
     1021 aattaggaga aattgcaaaa aaacacatga aggatgaata cacctgggaa aaaatcgtcc
     1081 aagagtacga ggaattattt ttacaatgaa agtaaacata ctcatgtcga cctacaatgg
     1141 tcaacagttc ttagctgagc aaattcgctc tatccaagaa cagacttaca cagactggac
     1201 actatttatt cgtgatgatg gttccagtga tcgaactaga gagattatta aagattttgt
     1261 tgaacaagat cagcgaattc acttcataga tgttgagaca gacgaaaatc tcggtgtcat
     1321 caaaagtttt cataggctag ttcattatga tactgctgat ttctattttt tcagtgacca
     1381 agatgatgtt tggctaccaa ataaactgga agttagcctg aaaaaagcac aagcctatcc
     1441 aacaaatttg ccattgatgg tttatatgga cctcaaagtt gtcaatcaaa atctagaggt
     1501 tatggcagaa agcatggtaa aatctcaatc tcatcatgcc aatacggaat tggtgcaaga
     1561 gttgactgag aatactgtaa ctggcggtgt cgccatgatt aatcatcatc tcgctgaaat
     1621 gtggcaagta actgaggata ttttgatgca tgattggtat ctggccctgc ttgcgtcagc
     1681 ctttggaaat ttggtattta ttgatcaacc aggggaactg taccgccagc attctgataa
     1741 tgttttaggg gctcgaacac tctcaaaacg ctttaaaaaa tggatttgcc ctcatatttt
     1801 atttgctgtc tattgggatt tgataaaaaa tagtcaaaaa caagcccgac acttactaca
     1861 aatgcctcta tctcagtcaa atagagaatc aattgaagca tttgtaacca ttatggataa
     1921 accaatgctt gaacgattca ggattttgag aaaatatgga ttgaggaaaa ataaggcttt
     1981 tcatacattg gtatttacaa cactcattat tacaaaattt gcttataagg aatagttatg
     2041 aacttattga atagagaaaa ccagattctt ttgaaagaaa tggtaaaaac tgattttaaa
     2101 ctgcgttatc aaggttcttt gattggtcac ctgtggtcaa tcctaaaacc attgttactt
     2161 tttacaatta tgtatttagt ctttgtacgt tttttgcgtt ttgatgatgg aactccacat
     2221 tatgcagtaa gcttactgct tggtatggtt acttggaact tttttactga agcgaccaac
     2281 atgggaatga tgtccattgt ttctcgtgga gatttgttgc gtaaattgaa tttttcgaaa
     2341 gaaattattg tcttttcttc agttgcagga gctgcaatta attacgccat taacttaatg
     2401 gttgtgtttg tatttgctgc tattaacggg gttcccttta cttggtccgt tttagttata
     2461 atcccattgt tttttgaatt ggcattacta gcaacaggta tagctttcat tctatcttct
     2521 ttatttgtaa gatttagaga tattggtcca atttgggaag tgttcttaca ggctggattg
     2581 tatgcgacac caattattta ttcattgaca tttattttac agcgtgggca agtaacattt
     2641 gctaagttga tgatgttgaa ccctgttgca caaattattc aagacttgag acattttatt
     2701 gtttattctg ggaatactac agttagtgaa ttgattgaaa atcctgttat tgtggcaatt
     2761 ccgtatattc ttccagtcgt tgtttaccta ttgggtataa ctgtgtttag aaaaaatgcc
     2821 aaaaagtttg cggagatttt gtaatggtaa aaaataataa tattgctgta aaagtagaac
     2881 atgttagcaa gagttttaaa cttccaacgg agagtagtca gagtctaaga actactttag
     2941 tcaatttatt taaagggatt aaaggctacg tagagtataa tgttttgcag gatatcagtt
     3001 ttgaagttga aaaaggggac ttttttggaa ttgttggtcg caatggttct ggtaagtcga
     3061 cactgttaaa aattttatct caaatatatg ttcctgaaag agggactgta gctgtggatg
     3121 gtaaattagt ttcttttatt gaacttggtg ttggttttaa tccggaacta actggtaagg
     3181 aaaatgtata cttaaatggt gctatgttag gatttactgc agaagaaatt gatgcaatgt
     3241 atgatgatat tgttgaattt gcggaattga gtgaattcat gaatcaaaag ttgaaaaact
     3301 attctagtgg tatgcaggta cgtttagcct tttcagttgc cattaaagct caaggagata
     3361 ttctgatact tgatgaggtt ctagcagtcg gtgatgaggc ctttcagcgt aaatgtaatg
     3421 attacttcct agagcgtaaa aaaagtggaa aaacaaccat tcttgtcacc catgatatgg
     3481 gagctgtgaa aaagtattgt aataaagctc ttcttataga gaaaggatac gtcaaggcat
     3541 taggagaacc tgatgatgta gctaatcaat acagttttga taatgtgctt gcctcaataa
     3601 gcgaagttac agaaaacgaa gaacctctgc atcagagtga tattgtaaaa gatttgcaga
     3661 ttaacctggt ctcaaaaaat caaattgaac cagatgaatc aattgaaatc gagtttagat
     3721 atacggtttt agaagatatt gaaacacata ttgcatttac atttttagat ttagaacgtc
     3781 attttgatgt atataacgac aattctatgg atttaaaaac atttggtaaa ggcgagaagt
     3841 ttttccgagt gaaatgtaag ctaccttcaa ttaatcaggc aaaattaaaa atggcggtgt
     3901 cagtacgaaa tagtaataag cagccgttat tatttgccaa gacatctgac acaccagcta
     3961 tttttattag taggaagttt agtactgata atattgcaga ggaagacgca gcaactgggt
     4021 ttattcagag aaatagccaa tgggagctgc tagattaata aaatataacg gaggcagaat
     4081 gtcgcgtttg ttggtatatg ttcactataa taaatataat gttgttagtg aatatattta
     4141 ttatcaatta aagtcgatac gaagtattta ttcagacata gtttttgttt ctaacagcca
     4201 tgtttcaaag gacatagtac aatatttaca gtcggaacga ctgattgatt tttttatcca
     4261 aagagataat attggttatg attttgcggc atggaaagaa gggctgaatc aagtaacatt
     4321 ttatcaatat gattcggtaa ctctgatgaa tgatacatgt ttcggccccc tctgggacct
     4381 agaggattat tatagtcaat ttgacagtga tgttgatgta gatttttggg ggatgaccaa
     4441 tcatttagag acaaaaatag atagtgtagt tgtcccggaa catttacagt catattttat
     4501 ggtatttaaa aaacgaatct tgcagagtca agcatttgtt ggtttttggt catcggtaag
     4561 tgagttgaca gatattcaag atgttataaa attatatgag agccaattga caaaaatact
     4621 tttatcagag ggttatagct ataagtgtgt attagatacg tccatttgtt gtaaaaccct
     4681 tgaaaatagc aacattacac tagaatatcc agaagttatt cttaaaaata atgttccatt
     4741 cataaaaata aagagtttta ccgaatatcc agacagaata tactctttat tacatcttat
     4801 taggatgaaa acgaaatatc cagttgaatt aatcgagagg catttgaggc agataatcat
     4861 tccgggtacg agttttattc ctcaaatacg ggtttcgcaa acgacagaga ccgttcgttc
     4921 ttcgacgtcg gtacttcttc atgttcacat agaatcagtg tctatttttg aagagtatat
     4981 tgaagagtta tgcaaaatag ccgatcggtg ccagttacta ataacattgc cagaagctga
     5041 tttttcaaat aagtgtagta tagttgagag atgtttattc acctaccaat tgagagcaca
     5101 gattgtaaaa gtcacagatg aattacaatt ttttgaaata gtaaacaact atatgggaga
     5161 tgccaaatat cttgctcata taactgtcaa acaaacaaat gaaacaaaa
//
LOCUS       DBNFCX010000118         5202 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.118, whole genome shotgun sequence.
ACCESSION   DBNFCX010000118 DBNFCX010000000
VERSION     DBNFCX010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 5202)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5202)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5202
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.118"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            101..1036
                     /gene="mvk"
                     /locus_tag="AC1PJC_002006"
     CDS             101..1036
                     /gene="mvk"
                     /locus_tag="AC1PJC_002006"
                     /EC_number="2.7.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004496 - mevalonate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016126 - sterol biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019287 - isopentenyl diphosphate
                     biosynthetic process, mevalonate pathway [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mevalonate kinase"
                     /protein_id="HIP6620979.1"
                     /translation="MSVVGKANGKIILMGEHAVVYGQPAIAMPFSAVEIIAQVTAQGE
                     ALTVACDFYKGLVHKMPKIWESLKHAIRFSLYRIGAPTDPAIHIEISSTIPAERGMGS
                     SAAVAVAVARALFAYYKKELTDSELWDIVQSSEKIAHGNPSGIDAATTSGKSPVFFIK
                     HQPIEPLELKLRAHLVVADTGVTGNTLEAISDVAALLEKKPEAIKLVEELGNLTRLAK
                     EDLATDQAELLGSRMNHAHALLQELGVSDPSLDTLVRLAQENGALGAKLTGGGRGGCM
                     IALARAAQDAQKLAHILDQAGARQTWIQYLGETND"
     gene            1029..2054
                     /gene="mvaD"
                     /locus_tag="AC1PJC_002007"
     CDS             1029..2054
                     /gene="mvaD"
                     /locus_tag="AC1PJC_002007"
                     /EC_number="4.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0004163 - diphosphomevalonate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0019287 - isopentenyl diphosphate
                     biosynthetic process, mevalonate pathway [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diphosphomevalonate decarboxylase"
                     /protein_id="HIP6620980.1"
                     /translation="MTKQTGIARAHTNIALIKYWGKRDKELFLPMNSSLSLTLDAFYT
                     DTKVVFDPELTADEFYLNGMLQKEKEILKISRFLDLFCEYIGERAFARVESLNFVPTA
                     AGLASSASAFAALALATATALDLDLSPAILSTLARRGSGSSTRSLFGGFVEWDMGTGS
                     EDSMAHPIDDADWDIGMVVLAVNTGPKKIASREGMDHTVATSPFYTAWVETAKQDLVD
                     IKAAIASRDFEKLGQITEHNGMKMHATTLSANPPFTYWSADSLVAQEAVRQVRKATGL
                     SAYMTMDAGPNVKVLCRASQVDELVAELAKVFPREKIITSKPGPAAYVLSEDEWQTSQ
                     AAFEKDL"
     gene            2056..3135
                     /locus_tag="AC1PJC_002008"
     CDS             2056..3135
                     /locus_tag="AC1PJC_002008"
                     /EC_number="2.7.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004631 - phosphomevalonate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0016126 - sterol biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019287 - isopentenyl diphosphate
                     biosynthetic process, mevalonate pathway [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomevalonate kinase"
                     /protein_id="HIP6620981.1"
                     /translation="MKVQVKIPGKLFLAGEYAVVEAGYPAVIAALDQYLTVTIETSDR
                     GLLHSSQQADLYLTWERKENEIFIQDAHPYALIETAMQVTEAYLTAKGHACQGTYSLS
                     VQSDLDDQASGAKYGLGSSGAVTVATVKALLTYYGHRPDALLTYKLAALAQTKLGMTG
                     SFGDLAASSFGGLIAYHSLDRSWLLGKMAELSLLDLVESDWQGLSISPIQLLQGLDLL
                     VGWTGSAASTDRLVSQMEDQKSQAEKEQIHSQFLADSKTCVEQLIVACQTNDLVSARQ
                     AITQNRKLLQDFARGMGLVIETPQLSQLCDLAQTYGAVAKSSGAGGGDCGICLVDSTE
                     QKAAIETAWQEAGILPLQLKITSRE"
     gene            3146..4243
                     /gene="fni"
                     /locus_tag="AC1PJC_002009"
     CDS             3146..4243
                     /gene="fni"
                     /locus_tag="AC1PJC_002009"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004452 - isopentenyl-diphosphate
                     delta-isomerase activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type 2 isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HIP6620982.1"
                     /translation="MFYLGEFGLDRKDQHVGLANQQYSATPAKDFTETLFVHHSLPQT
                     KVDEVDISTSVAGLDFAFPFFVNAMTGGSKKTREINRLLGIMGHFGKIALASGSVSAA
                     IKDPSVAETFSVMRRENPYGIIFANLGAHHSVENAKRAVDLLEANAIQIHVNAPQEIV
                     MPEGDRDFTMWLKNIETLVRELEVPVIVKEVGFGMSRETVAQLASVGVQTIDVSGTGG
                     TDFAKIENARRTFNDYAYLEGWGQSTVTSLVEAMSVSEEVRPSLIASGGIKTPLDIVK
                     SLALGADLVGMSNHFLQYVKDGKGHRFDDGLQAIKTYQWQMAEIMTMLGAKNIADLRK
                     KDLVLAPNVQNWCEARGIDWKAYARRSQLVK"
     gene            complement(4345..5139)
                     /locus_tag="AC1PJC_002010"
     CDS             complement(4345..5139)
                     /locus_tag="AC1PJC_002010"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF012318.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like serine peptidase"
                     /protein_id="HIP6620983.1"
                     /translation="MSKKLAMIVATILLFFSYISPIKAIANTIREPLTTEEKVISPNN
                     LIYALNIDKTVNGVMRCTGTYIGDNYLLTAGHCMTDRHGSLNSTQGVTAETNAASHPV
                     AFKAFKKSVFSGNPFKPMSGYAGFQNFKNDVGLIKVTEPASVPLDTSGVHLTVHNDLQ
                     YLVGKTISTVGYSRYFKGDLTKTQGTVLRVEEDGTLTVDFYVAEQNSGSPVFYNGEII
                     GVVTGVADVPNCQGSPMCSKATITPFTMDMKAKLFDPNGIPVSVIE"
BASE COUNT         1406 a         1168 c         1267 g         1361 t
ORIGIN      
        1 ataatctcct agagaacagt cgactgcggt cggctgtttt cgtgtgttct attcttatgt
       61 aaaaatggta taatagtagt gattgtataa ggagaaaagt atgtcggtag taggaaaagc
      121 aaatggaaaa atcattttga tgggagagca tgcggtggtc tatgggcaac cagcaattgc
      181 tatgcctttt tctgctgttg aaattattgc tcaggtaact gctcaagggg aagcgctgac
      241 tgttgcttgt gacttctata aaggcttggt gcacaagatg ccaaaaatct gggaaagcct
      301 caagcatgcc atccgtttct cgctctatcg tatcggagca ccgacagacc cggctatcca
      361 tatcgagatt agttccacca ttcctgccga gcgcggtatg ggctccagtg cagccgtggc
      421 agttgcagta gcacgcgccc tctttgccta ctataaaaaa gagctgaccg acagcgaact
      481 ctgggacatc gtccagtctt cggaaaaaat tgcccacggc aatccatcag gcatagatgc
      541 ggcgaccacc agcggcaagt cccccgtctt ttttatcaag caccagccca tcgagccctt
      601 ggagctgaaa cttcgtgccc acttggtagt ggctgacacc ggcgtgacgg gaaataccct
      661 agaagccatt tcagatgtgg cggctttatt ggagaaaaag ccagaggcta tcaagctagt
      721 agaagaactg ggtaacttga cccgactggc caaggaagat ttagccacgg accaggcaga
      781 gcttctaggc agcagaatga accatgctca tgccctcctg caagaattag gcgtgtctga
      841 tcctagccta gatacgctag tccgccttgc ccaagaaaat ggagccctcg gagccaaatt
      901 aaccggtggc ggacgaggcg gttgcatgat tgctctggca agagcagctc aggatgccca
      961 aaaacttgca cacatccttg accaagcagg cgcccgccaa acctggatac agtacttagg
     1021 agaaaccaat gactaaacaa acaggcatag cccgtgccca taccaatatt gccttgatta
     1081 aatactgggg aaaacgagat aaggaattat tcctacccat gaattctagc ctatccttaa
     1141 cccttgacgc attttatacg gataccaagg tcgtttttga cccagaattg actgccgatg
     1201 agttctatct caacggaatg ttacaaaaag aaaaagaaat tttaaaaatt tctcgatttt
     1261 tggatttatt ttgcgaatat ataggtgaaa gggcatttgc ccgagtggaa agtctaaatt
     1321 ttgttccgac tgcagctggt ttggcaagct cagcatcagc tttcgcagca cttgcacttg
     1381 caaccgcaac tgctttggat ttagatttgt caccagccat cctatcaacc cttgctcgca
     1441 ggggttctgg ctctagcacc cgtagcctat tcggtggatt tgtcgagtgg gatatgggca
     1501 ctggttcgga agattctatg gcccatccca ttgacgatgc ggattgggat atcggcatgg
     1561 tcgtcttggc ggtcaatacc ggaccgaaaa agattgccag tcgagaggga atggatcaca
     1621 cggttgccac ctcaccattt tacacagcct gggtagaaac cgctaagcaa gacttggtgg
     1681 acatcaaggc agccattgcc agccgtgatt ttgaaaaact tggtcagatt acagagcaca
     1741 atggcatgaa aatgcatgca acaacgctct ctgccaatcc cccctttacc tattggtcag
     1801 ccgatagcct agtggctcaa gaggcagtcc gtcaggttcg taaagcaact ggcttatcag
     1861 cctacatgac catggatgcg ggaccaaatg tcaaggtcct ctgccgagca agtcaagtgg
     1921 atgagctagt agctgaattg gccaaagtct tcccaagaga gaaaatcatc accagcaagc
     1981 ctggtcctgc tgcctacgtc ctcagtgaag acgagtggca gacctcacaa gcagcgtttg
     2041 aaaaggactt gtagcatgaa agtacaagta aagatacctg gaaaactctt tctagcaggg
     2101 gaatacgcag tcgtcgaggc cggttatcct gcggtgattg cggcccttga ccagtacctg
     2161 accgtcacca ttgaaacaag tgaccgaggc cttcttcatt ccagccagca agcagatctc
     2221 tatctgacct gggagcgtaa ggaaaatgag attttcatcc aagatgccca tccctatgcc
     2281 ctgattgaga cagccatgca ggtgacagaa gcctatctga cggccaaggg gcatgcttgt
     2341 cagggaacct atagcctatc tgttcagtct gacctagatg accaagcttc tggtgccaag
     2401 tatggtctgg gttcctctgg tgctgtaacg gttgcgacgg tcaaggccct gttgacctac
     2461 tacggtcacc gaccagatgc cctcctgacc tacaagctgg cagccttggc ccagaccaag
     2521 ctaggcatga caggttcctt cggagattta gcggcttcca gttttggtgg cttgatcgcc
     2581 tatcattcct tggaccgttc ttggctttta gggaaaatgg cagagctgtc cctgctggat
     2641 ctggtggaaa gtgattggca aggtttgtct atcagcccta tccagttact ccaaggctta
     2701 gacctcttgg tgggatggac aggatcggcg gcttcgacgg acaggctagt ttcccagatg
     2761 gaagaccaaa aaagtcaggc tgaaaaagag caaattcata gccagtttct agccgactcc
     2821 aagacctgtg tagaacagtt gatagtagct tgtcagacaa atgacttggt atcagctaga
     2881 caggctatta ctcaaaaccg caagctctta caagactttg cgagaggaat gggtttggtc
     2941 attgaaacgc ctcaactgag tcaactctgt gacctggctc agacttatgg agcggtggcc
     3001 aaatcatctg gtgcaggcgg aggtgactgc ggcatttgct tggttgacag tacggaacaa
     3061 aaagcagcga tagagacggc ttggcaagaa gccggcattc ttccactcca actaaaaatc
     3121 acaagtagag aataaggaga accctatgtt ttatctagga gaatttggtt tagaccgcaa
     3181 ggatcaacac gttggcttgg ccaaccagca atatagtgcc acaccggcca aggactttac
     3241 ggagaccttg tttgttcatc attccctgcc tcaaaccaag gtggatgaag tggatatttc
     3301 gaccagcgta gctggtttgg attttgcctt tcctttcttt gtcaatgcca tgaccggtgg
     3361 aagcaagaag acgcgggaaa tcaaccgctt gttggggatt atggggcatt ttggcaagat
     3421 tgcgctagct tctggttcgg tcagtgcggc gatcaaggat ccgtctgttg cggaaacttt
     3481 ctccgtgatg cgtcgggaaa atccttacgg gattatcttt gccaacctag gtgcccatca
     3541 cagtgttgag aatgccaagc gggcggtgga tttgttggag gcaaatgcca ttcagatcca
     3601 tgtcaatgca ccccaggaga ttgtcatgcc tgagggagac cgtgacttta ctatgtggtt
     3661 gaaaaatatt gaaacccttg tacgtgagct ggaagtacct gtcatcgtca aggaagttgg
     3721 ttttggcatg agccgagaaa cggttgccca gctggcttct gtcggtgtgc aaactattga
     3781 tgtatctggt actgggggaa cggacttcgc caagattgaa aatgcccgtc ggactttcaa
     3841 tgattatgcc tatttagaag gttggggcca gtctaccgtg acttccttgg tagaagccat
     3901 gtctgtttct gaagaagttc gcccaagcct gattgcatct ggtggtatta agacgccact
     3961 agatattgtt aaatcattgg ctttgggtgc agaccttgtt ggtatgtcca accatttcct
     4021 tcagtatgtc aaggatggta aggggcatcg ttttgacgac ggcttgcagg ctattaagac
     4081 ttatcaatgg cagatggctg aaatcatgac catgttgggg gctaagaata ttgcagacct
     4141 tcgcaagaaa gatttggttt tggctccaaa tgtacaaaac tggtgcgaag cgcgtgggat
     4201 cgactggaaa gcctatgccc gtcggtcgca attggtaaaa taagcattaa agaaagaact
     4261 atctcaaaac tacatttcat agttacgaga tagttctttt attttcatga acagctaata
     4321 tatagaaagg gatgttaatg gttattattc aataacagaa actggaattc cgtttggatc
     4381 aaatagtttg gctttcatat ccattgtaaa cggagtaatt gttgctttgc tacacattgg
     4441 agaaccttga caatttggga catctgcaac accagtgact actcctataa tctcaccatt
     4501 gtaaaaaaca ggagaaccag agttttgctc ggctacatag aaatcaacgg ttaaagtacc
     4561 gtcttcttca acacgcagca cggtaccttg tgtttttgtc aaatctcctt tgaaatagcg
     4621 agagtaaccg acagtgctaa ttgtttttcc gacaagatat tgtaaatcgt tatgaacggt
     4681 aaggtgtact ccactagtat caagaggaac agatgcgggc tcagttacct tgattaagcc
     4741 aacatcgttt ttaaagtttt gaaaacctgc atagccagac attggtttaa atggatttcc
     4801 tgagaacacg gatttcttaa aagctttaaa agctacagga tgactagcgg catttgtttc
     4861 cgcagttaca ccttgtgtag aattaagact accatgacga tcagtcatgc aatgaccggc
     4921 ggttaagaga taattatctc caatgtaagt tcctgtacat ctcataacac cgttcactgt
     4981 cttatctata ttcagcgcat aaatcaagtt gttcggacta attacctttt cttctgttgt
     5041 aagtggttca cgtatagtgt tagcgatagc ctttataggg gatatatatg agaagaacaa
     5101 taatattgtt gcgacaatca ttgctaattt tttagacata catttctcct tcttatgaca
     5161 taaataaccc tctcttcatt aaatattagc tgataccttt ca
//
LOCUS       DBNFCX010000119         5161 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.119, whole genome shotgun sequence.
ACCESSION   DBNFCX010000119 DBNFCX010000000
VERSION     DBNFCX010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 5161)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5161)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5161
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.119"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            115..186
                     /locus_tag="AC1PJC_002011"
     tRNA            115..186
                     /locus_tag="AC1PJC_002011"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:148..150,aa:Arg,seq:cct)
     gene            complement(207..1421)
                     /locus_tag="AC1PJC_002012"
     CDS             complement(207..1421)
                     /locus_tag="AC1PJC_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HIP6620984.1"
                     /translation="MSNKMKQAIQLLFFSSLIGVGAGIITTLFGKILLGIGDLRSEYF
                     TYLIPFLPLAGVLIVFIYQKWGRELQAGMGLVFKAGQGEKAQISPILIPLIISTTWLS
                     HLVGASVGREGVAVQLGASLSHWLQKHGFTHLRKDMITKIGMAAGFAGLFQTPWAASF
                     FAIEVLIVGQYSWTSLPYCLVVAFTASTTSHLLGLEKFSHTISSFSFQFTDSFKWLFI
                     ALCFGFIGNLFALFLAQAKSISTRWLPNPYIKIAIMGVGLTVLLFFFHQGRYTGLGTN
                     LIDASLAGEQVFAFDWLLKLLLTCLCLAAGFQGGEVTPLFAIGASSGAVLAGLLGLPT
                     ELVAALGYCAVFGTATNTLLAPLFISYEVFGANILPYAIPVLAIAYLINRKQTIYGQQ
                     LRKFNNAKKPII"
     gene            complement(1411..1689)
                     /locus_tag="AC1PJC_002013"
     CDS             complement(1411..1689)
                     /locus_tag="AC1PJC_002013"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HIP6620985.1"
                     /translation="MNLDCIREQINTIDSQLVELLEKRMELVDQVTAYKQATGKPVLD
                     TSREKAVLERVGKLVQKDDYRSAIQATFSDIMAQSRTYQSSKLANHEQ"
     gene            complement(1771..2040)
                     /gene="rpsN"
                     /locus_tag="AC1PJC_002014"
     CDS             complement(1771..2040)
                     /gene="rpsN"
                     /locus_tag="AC1PJC_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012560987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HIP6620986.1"
                     /translation="MAKKSKMARYQRQLELIERYADLRKSLKEKGDYQALRKLPRDSN
                     PNRLKYRDRTDGRPHAYMRKFGVSRITFRELAHLGQLPGVKKASW"
     gene            complement(2182..2643)
                     /locus_tag="AC1PJC_002015"
     CDS             complement(2182..2643)
                     /locus_tag="AC1PJC_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin"
                     /protein_id="HIP6620987.1"
                     /translation="MALAKIVYASMTGNTEEIADIVASKLEELGLEVQVHECTTIETE
                     EILDADLIVVASYTYSYGGDGELPDEIVDFYADLADLDLTGKVYGVCGSGDTFYDDFC
                     SAVDDFDVMLGSRGATKGAENVKVDLAAEDEDIVNLEQFATDLVAKLDTLN"
     gene            2738..3682
                     /locus_tag="AC1PJC_002016"
     CDS             2738..3682
                     /locus_tag="AC1PJC_002016"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HIP6620988.1"
                     /translation="MTIYSKIIEKIHEYDTIIIHRHKRPDPDAIGSQVGLQKLLQKNF
                     PEKTIKVTGFEEPNLAWMAGMDVVADQDYQGALVIVTDTANTARVDDDRYTQGDFLIK
                     IDHHPNEEPYGELLWVNTEASSCSEMITELAIQCQLELDGDIARLLYAGIVGDTGRFL
                     YPATSSRTFEIVARLRQEDFDFARMSRQMDTIDFKIAKLTGYVYDNLEVDEHGAARVI
                     LTQDILEKYGVTDADTSFIVGAPGRIGIVQSWGIFVEQTDGNYRVRLRSKYLPINEIA
                     KRHDGGGHPLASGANSYSLSENEQIYQEIQEVVRNASK"
     gene            3669..4697
                     /locus_tag="AC1PJC_002017"
     CDS             3669..4697
                     /locus_tag="AC1PJC_002017"
                     /EC_number="2.7.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HIP6620989.1"
                     /translation="MQASSRSLRLMGTIIETRIWYPQAEPILDQVEELLYLYKDRFSA
                     NDLTSELMEVNLNAGVQAVPVADDLYELIKLGKEHSLAQESFLNITIGPLVQSWRIGF
                     SDAKLPTQEMISEKLQLINPRDIELDDEEQTVYLKKEGMAIDLGALAKGYVADKIVDF
                     LKRIGVEAGLINLGGNVLTFGQAPHNADGYWRIGIQDPQKLRGENALVLKIGEESVVT
                     SGIYERTLTVNGKTYHHILSPETGYPIESQLASLTIVSKQSVDGEIWTTRLFGQEITR
                     VYKMVEETDGIEAVLIGLDGRILVTSGLSEKVLAGEERISDSLGSPSRGGFGVRVTSD
                     LASGASVL"
     gene            4816..5058
                     /locus_tag="AC1PJC_002018"
     CDS             4816..5058
                     /locus_tag="AC1PJC_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019770973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HIP6620990.1"
                     /translation="MKKDIHPEYRTVVFMDTTTGYKFLSGSTKKSNETVEFEGETYPL
                     IRVEISSDSHPFYTGRQKFTQADGRVDRFNKKYGLK"
BASE COUNT         1587 a         1045 c         1111 g         1418 t
ORIGIN      
        1 aaaacaattg tgtttcatct tagagtaggt tctgcttttt gtaaaaattt gaaaaaactt
       61 atataacctt gttcttgcaa tctgctctct tctggggtac aatagagaag cagacttccc
      121 ttagttaaat ggatataaca aattcctcct aagaattagt tgcaggttcg attcctgcag
      181 gggagatgga gagtatacga aaaagcctaa atgataggct tttttgcatt attgaatttc
      241 ctcaactgct gtccataaat agtctgtttt ctgtttataa gataagctat ggcaagtaca
      301 ggaatagcat agggcaggat attagcgccg aagacttcat aactaatgaa gagaggagcc
      361 agtaaggtat tggtggctgt tccaaatacg gcacaatacc caagggctgc aacaagttca
      421 gttggtagac ctagtaatcc tgctaaaaca gccccagaac ttgccccaat cgcaaagagc
      481 ggagtaactt cgcccccttg aaaacctgca gccaaacaaa gacaggttag taggagtttt
      541 agtagccaat cgaaagcaaa cacctgttcc ccagctaaac tggcatcgat caaattggtt
      601 cctagaccag tataacgacc ttgatggaag aaaaatagta gaacggtcag tccaactccc
      661 atgatagcta ttttaatgta aggatttgga agccatcgag ttgagatgct ttttgcttgc
      721 gccagaaaca aagcaaataa attgccgatg aaaccgaagc aaagggcaat aaatagccat
      781 ttgaaactat ctgtaaactg gaatgaaaaa gatgaaatag tgtgggaaaa tttctccaat
      841 cccagtaaat gggaagtagt agaagccgtg aaagcgacaa ccagacaata ggggagacta
      901 gtccaagaat attggccaac aattaatacc tcaatggcaa agaaactagc agcccatggt
      961 gtttgaaata accctgcaaa acctgcggcc ataccaatct ttgttatcat atctttgcgc
     1021 aagtgtgtga aaccatgttt ttgtaaccag tgtgagagac tggctccaag ttggacagct
     1081 acaccttcgc gaccaacgga agcaccgaca agatgactga gccaagttgt agagatgatg
     1141 agtggaatga gaatgggaga aatttgcgct ttctcccctt gtccagcttt aaagactaag
     1201 cccatgcctg cttggagttc ccttccccat ttttgataaa tgaaaacaat caacacacct
     1261 gcaagcggta gaaaggggat tagatatgta aaatattcag accgtaagtc tccaatccct
     1321 agtagaattt tcccaaaaag tgtggtgatt attcctgcac cgactccaat taagctggaa
     1381 aagaaaagga gttggatggc ttgtttcatc ttattgctca tgattcgcta acttggaaga
     1441 ttgataggtt cttgattggg ccataatatc gctaaaggtt gcttgaatgg cagaacggta
     1501 atcatccttt tggactaatt ttccaactct ttcaaggaca gctttttctc ggctggtatc
     1561 caaaacaggc ttacctgttg cttgtttata ggctgtaact tggtcgacca actccattcg
     1621 tttttcaagt agttcaacta attggctatc aatcgtgtta atctgttcgc ggatgcaatc
     1681 caaattcatc ttataaacct ccgtatattg tttcagttgt tttttagtat agcaaaaaac
     1741 aaggcagaat actagccttg tttgaggaag ttaccaactt gcttttttta ccccaggaag
     1801 ttgaccaaga tgggctaatt cacggaaggt aatccgactc acaccgaatt ttcgcatata
     1861 agcgtgcgga cggccatcgg tcctgtcgcg gtatttcagt cgatttggat ttgagtcgcg
     1921 aggcaatttt cgaagtgctt gatagtcacc tttttctttg agacttttac gtaaatccgc
     1981 atagcgctcg attaactcca actgtctctg atagcgtgcc atttttgatt ttttagccat
     2041 aaaattctcc tttttttcaa aaaacttaac tggttaatta tatatcgaaa ctattaagat
     2101 tgcaagcaat aggtgtacaa tcttaataaa aggctaaaag aaaacagact agacctattg
     2161 ataagccagt ctgtttgtca attaattcaa agtatctaat tttgcaacaa ggtcagttgc
     2221 gaattgctca aggttaacaa tatcctcatc ttcagcggca aggtctacct taacattttc
     2281 ggcaccctta gttgcaccac gtgaacccaa catgacatca aagtcatcta ctgcactaca
     2341 gaagtcatca tagaaggtat cgccagaacc acaaacaccg tagaccttac cagtcaaatc
     2401 taagtcagct aggtcggcat agaaatcaac aatttcatct ggaagctcac cgtctccacc
     2461 gtaagaatag gtgtagctgg ctaccacgat gaggtccgca tccaagattt cttcggtttc
     2521 aatagtcgta cattcgtgaa cctgtacttc caaacctaac tcttctagct tactggcgac
     2581 gatgtcagcg atttcttctg tgttaccagt catactagcg taaactattt ttgctagtgc
     2641 cataatttcc tccaaattac atagtaattc cattatacca cactcccatc attttcaaaa
     2701 ggggaagttt atgctaaaat gatgaaaagg agttgctatg acaatttaca gtaaaattat
     2761 tgaaaaaatt cacgaatacg acacgattat tattcaccga cataaacgac cagatccgga
     2821 tgccattggt agtcaagttg gcttgcagaa actcttacag aagaattttc ctgaaaaaac
     2881 catcaaggta accggttttg aggaaccaaa tcttgcttgg atggcaggaa tggacgtagt
     2941 tgcagaccaa gattatcaag gagccttggt tatcgtgaca gatactgcca atacggcgcg
     3001 tgtggatgac gaccgttata ctcaaggaga tttcttgatt aaaatcgatc atcaccccaa
     3061 tgaagagcct tatggcgaac tgctctgggt caatacggaa gccagctcat gcagtgaaat
     3121 gattacggaa ctggccatcc aatgccaact ggaactagat ggagatattg ctcgtttact
     3181 ctatgcagga attgtaggcg atacaggccg ctttctctat ccagcaacca gctcgcgcac
     3241 ctttgagatt gttgctcgtc tccgccaaga agattttgac tttgcaagga tgtctcgcca
     3301 aatggatacc atcgatttca agattgccaa gttgacaggt tacgtctacg acaacttaga
     3361 ggtggatgaa catggtgcgg cacgtgttat tttgacacag gatattctcg aaaaatatgg
     3421 cgtgaccgat gcggacactt cctttatcgt aggtgcacca ggacggattg gaatcgttca
     3481 atcttggggg atttttgtgg aacaaactga cggaaattac agagtccgtt tgcgcagcaa
     3541 gtatcttcca atcaacgaga ttgccaaacg ccacgatggc ggtggccacc cactagcaag
     3601 tggtgctaac tcttattcac tctccgaaaa tgagcaaata taccaagaaa tccaagaggt
     3661 agtgaggaat gcaagcaagt agtcgctccc ttcgtcttat gggaaccatc attgaaacca
     3721 gaatatggta tcctcaggca gaaccgattt tggatcaggt agaagaattg ctctatctct
     3781 acaaggatcg gttttctgcc aatgatttga cgtctgaatt aatggaggtc aacctcaatg
     3841 cgggtgttca ggcggttcct gttgccgatg acctgtacga attgattaaa ttgggcaaag
     3901 aacacagtct ggctcaggaa tcttttttga atattaccat tggtcccctt gtacaaagct
     3961 ggcggattgg atttagcgat gccaaacttc caacccaaga aatgatcagt gaaaaactcc
     4021 agctcatcaa tccaagggac atcgaattag atgatgagga gcagacagtc tatttgaaaa
     4081 aagaaggtat ggcgattgat ctgggtgctc ttgctaaagg atatgtagca gataagattg
     4141 ttgatttctt gaaaagaata ggtgtggagg ctggactgat taatctgggt ggcaacgtcc
     4201 tgacctttgg tcaagctcct cacaatgcag atggctattg gcgaattggt atacaggatc
     4261 ctcagaaact acgtggtgaa aatgccctcg tcctaaaaat aggagaagaa tcagtagtca
     4321 cctctggtat ttacgaaaga acccttactg tgaatggaaa gacctatcat catattttga
     4381 gtcccgagac cggctatcca atcgagtcgc agctggctag tttgaccatt gtatccaaac
     4441 aatccgttga tggtgagatt tggacgactc gactgtttgg tcaagaaata actcgggttt
     4501 ataagatggt agaagaaact gatggtatcg aagcggttct gattgggctg gatggcagga
     4561 ttctagtgac ctcagggctt tctgagaaag ttcttgctgg tgaagaaaga atttctgata
     4621 gcttgggcag tccttcaaga gggggatttg gcgtcagagt aacttctgac cttgcttcag
     4681 gtgcttctgt actataactt gaaaaaatat taaaaaaata ggtaaaaaga cttgccataa
     4741 gaacaaactt ttggtaaact taaatggtta taatctatgg ctcggaaaga gtccatggca
     4801 gaaaggaatt ttaaaatgaa aaaagatatc catccagaat atcgcactgt tgtcttcatg
     4861 gacacaacta ctggctacaa gttccttagc ggttcaacta agaaatctaa cgaaacagtt
     4921 gaattcgaag gtgaaactta cccattgatc cgtgtggaaa tttcatcaga ctcacaccca
     4981 ttctatactg gacgtcaaaa gttcactcaa gcagatggac gtgtggatcg cttcaacaaa
     5041 aaatacggtc tcaaataaaa aaacagtcct taacggactg tttttttcac gagcttgaaa
     5101 ataaaagagc gagttatggt ccagtggacc attttttctt tgactctaga aataagagag
     5161 a
//
LOCUS       DBNFCX010000120         4962 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.120, whole genome shotgun sequence.
ACCESSION   DBNFCX010000120 DBNFCX010000000
VERSION     DBNFCX010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 4962)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4962)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4962
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.120"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..156
                     /locus_tag="AC1PJC_002019"
     CDS             <1..156
                     /locus_tag="AC1PJC_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head maturation protease, ClpP-related"
                     /protein_id="HIP6620991.1"
                     /translation="EEHGMETESYSFSRTAAQQDLLVKMQAKLGVQQPKKTIPINQLE
                     KRLNLLK"
     gene            175..1380
                     /locus_tag="AC1PJC_002020"
     CDS             175..1380
                     /locus_tag="AC1PJC_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000040504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HIP6620992.1"
                     /translation="MSKLLELKEKRNQAWQQAKTFLDSVRSEDGLVSEEDSKRYDDME
                     SKINLYNQEIARLERQEKIDLELAQPASQALIGQPTTVLNDKTTEEEKKGVASDSYAK
                     TFWTSVRKRHFFDVKDVLRVGEDTEGGHLVPDEYEKKLVQGLQEENFFRSLATVIRTS
                     SGERKIPVVTGHGSASWMDENGLYPETEETFGQVTLDSHKIGTAIRISEELLNDSVFD
                     LESYMTAEFARRIGTEEEKAFLIGDGSKKPTGIFTQAEVTGPTTATKDITFDDMIELY
                     HSLPAPYRKNAVWILHDTTVKAIRKLKDNNGNYIWQPSTQAGQPDLILNRPYYTSTFA
                     PLPEAGNKAIAFGDFSYYWISDRQGRTFKRLNELYANNGQIGFLASQRVDGKLVLPEA
                     VKTLTVKAK"
     gene            1383..1640
                     /locus_tag="AC1PJC_002021"
     CDS             1383..1640
                     /locus_tag="AC1PJC_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017646690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016032 - viral process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="head-tail connector protein"
                     /protein_id="HIP6620993.1"
                     /translation="MVSLAEVKQYLKVEHEDEDGLIEQLLETCQQLCEDILRQSTYSE
                     VLKTAILYGVAYLYEHREDANHKELKETLYHLLLAERKDVF"
     gene            1640..1978
                     /locus_tag="AC1PJC_002022"
     CDS             1640..1978
                     /locus_tag="AC1PJC_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000684963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head-tail adaptor protein"
                     /protein_id="HIP6620994.1"
                     /translation="MKIAPLRERLVFHVRQIVQDEIGNETSTWIPLFDRWCSCRPLTL
                     TERDGSVTKLEQEKVQFTLRYEKAILGLHSLTTHIQFRGQTYEIESIDGDTVPRKLIY
                     IVAIREESYD"
     gene            1971..2339
                     /locus_tag="AC1PJC_002023"
     CDS             1971..2339
                     /locus_tag="AC1PJC_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000161242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HIP6620995.1"
                     /translation="MTRIELDALETAIANELAEFVVDTTEVMREVVEEVTEESIETLI
                     ATSPRKSGSYAKGWKSKATIDTSTGLTKTIHNRTPGLTHLLENGHAKSSGGRVEGIKH
                     IAPVEKQAIQSLEEKLRKRV"
     gene            2346..2672
                     /locus_tag="AC1PJC_002024"
     CDS             2346..2672
                     /locus_tag="AC1PJC_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015057728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620996.1"
                     /translation="MLLSEMYSILKELQLPLAYHHFEEGSRPRPPYMVYLVTDSDNHG
                     ADNWTYHKQNNLQLELYTTKKDLAAEQKVESLLDSHLIYFEKVETYISSEKLYQVTYY
                     ITLHGG"
     gene            2674..3243
                     /locus_tag="AC1PJC_002025"
     CDS             2674..3243
                     /locus_tag="AC1PJC_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="major tail protein"
                     /protein_id="HIP6620997.1"
                     /translation="MAEKNKVTFGLQDVHWAEVTSEGSDGTLTYGNVERLRGAAELTL
                     EPTGDKGSYKADNINFYTTESNDGYEGTLKVALLTQEFLTRVLGEQLDATTNTISEIA
                     NSEKKNFALMFRFEGDKKETLHVLYYCYASRPTVGSKTKSGSDINEVELTFTASPRPL
                     DKVVRRRTTEETSDEIRENWFKAVFEPRR"
     gene            3255..3674
                     /locus_tag="AC1PJC_002026"
     CDS             3255..3674
                     /locus_tag="AC1PJC_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003047255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6620998.1"
                     /translation="MRESITIAGTTYELATNAYTPIAYKEQFGKDYFQDLFSMVNSQA
                     ILAKLDELEDGEELQAHHIDVSILSDFDMTFFHRIFWVFAKSANPRVKPFVDFYMEME
                     EFPVQEVAPVLMNMLNQGMSTRKKQMKQKQRVKKSSQ"
     gene            3857..>4962
                     /locus_tag="AC1PJC_002027"
     CDS             3857..>4962
                     /locus_tag="AC1PJC_002027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015445172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HIP6620999.1"
                     /translation="MAGNIKGITIEIGGDTQPLQDTLKGVNKQASEATKELRQIDKAL
                     RFDTGNVTLLTQKQEVLAKQVEITKEKLATLRQAQSQVEAQFKAGDIGADQYRAFQRE
                     VETTQRLLTSYETKLADVSSTLENHGRSSSSAAQQLDKLQVEQGQLASEMNKVTSQFE
                     LQESALSSNSSEAERNAIAQQKIGAQSEIVSKQISNLEKQLALTKSEYGENSIEANKM
                     EAELNQAKTALNNLNNEMDDTKSSADGAQDGMKAMSDTIRAEALQATSEKLADISQKI
                     FEVGTESMSAAAQLQASNAQFSTVFGDMENAAKDALNKIGEEMDIVPERLQGSFTQMA
                     SFAKTSGMDTAQALDLTTRATRAAADGAAFYDKS"
BASE COUNT         1604 a          973 c         1132 g         1253 t
ORIGIN      
        1 gaggaacatg gaatggagac tgagagttat tctttcagtc gaactgctgc ccaacaagat
       61 ttacttgtca aaatgcaggc gaaacttgga gtccaacaac caaagaaaac aatcccgatc
      121 aatcagttgg aaaaacgatt gaatttgctc aaataacgaa aggaaaatga actgatgtct
      181 aaattacttg aattgaaaga aaaacgtaac caagcttggc aacaagcaaa aaccttcctt
      241 gattctgtcc gctctgaaga cggactggta tcagaggagg attctaaacg ctatgatgac
      301 atggaatcaa aaatcaacct ctacaatcaa gaaattgcac gattggagcg acaagaaaag
      361 attgaccttg aacttgctca accagcgtca caggctttaa ttgggcaacc cactacagtt
      421 ttgaatgaca agactactga agaggaaaag aaaggtgtcg cttcagatag ctatgccaag
      481 actttttgga caagtgttcg taagcgtcac ttctttgatg tcaaagacgt ccttcgagtt
      541 ggggaagata ccgaaggtgg ccatctggtt cctgatgagt atgagaagaa actagttcaa
      601 ggattacaag aagagaattt cttccgtagc cttgcgactg ttatcagaac atctagtggt
      661 gaacgtaaga tccctgttgt gacaggacat ggttcagcct catggatgga tgaaaatggt
      721 ctttatcctg aaacggaaga aacctttggt caggtgacac tagactctca taagattggg
      781 actgctattc gtatttcaga agagttgcta aacgattcag tctttgacct tgaatcctat
      841 atgacagctg aatttgctcg tcgaattggt acggaagaag aaaaggcatt cttgattggg
      901 gatggttcta agaaaccgac aggtatcttt actcaggcag aagttacagg tccaacgact
      961 gctacaaagg atattacctt tgatgacatg attgaattgt atcattctct accagcacca
     1021 tatcgtaaga acgcagtttg gattttacat gatacgactg tcaaagctat ccgtaaactc
     1081 aaagataata atggcaatta catttggcag ccatccactc aagctggaca accagatttg
     1141 attctaaatc gtccatacta tacatcaacc tttgccccac ttcctgaagc aggaaacaag
     1201 gccattgcat ttggtgattt ctcatattat tggatttcgg accgtcaggg acgtaccttc
     1261 aaacgtctga acgaactcta tgccaataat ggacagattg gttttcttgc ttcacaacgt
     1321 gttgatggca agttagtcct acctgaagcc gtgaagacac taacagtaaa ggctaagtag
     1381 tcatggttag tttagcagaa gtaaaacagt atcttaaagt ggaacacgag gatgaggatg
     1441 ggctgattga gcagttgctt gaaacctgtc aacaactctg tgaagatatt ttgcgtcaat
     1501 caacttattc agaagttcta aagacggcaa tcctatacgg ggttgcctat ctttatgaac
     1561 acagagagga tgcaaatcat aaggagttga aagaaacact ttatcacttg ttgttggccg
     1621 aacgaaagga tgtgttctga tgaagattgc acctttgagg gaacgcttgg tgtttcatgt
     1681 tcgacagatt gttcaagatg agattggcaa tgaaacttcg acatggatac ctttatttga
     1741 ccggtggtgc tcttgtcgtc ctctcacctt gaccgaaagg gatgggagtg tgacgaaact
     1801 ggaacaagag aaagtccagt tcaccctcag gtatgaaaag gcaattcttg gacttcattc
     1861 cttaacgact cacattcaat ttcgtggtca aacctatgaa attgagtcta ttgatggaga
     1921 tacagtacca cgtaaactga tttacatcgt cgccattagg gaggagagtt atgactagaa
     1981 ttgaactaga tgcactagaa actgccatcg caaatgagct ggcggagttt gtagtggata
     2041 ccacagaggt gatgcgtgaa gttgtagagg aagtcactga ggaatccatc gaaaccttga
     2101 tagcaacgtc acctagaaag agtggttctt atgccaaagg gtggaagagt aaagcaacga
     2161 ttgataccag tacaggtcta accaaaacca ttcataatcg aacaccaggc ctgacgcatc
     2221 tattagaaaa tggtcatgcc aaaagctctg gtgggcgagt tgagggaatt aagcatatcg
     2281 cacctgttga gaaacaagca atacaatcct tagaagaaaa gctgagaaag cgagtgtgat
     2341 atgacatgtt actgagcgaa atgtactcca ttctcaaaga attacagctc ccactcgcct
     2401 accatcattt tgaagaaggg agtcgtccaa gaccaccgta tatggtttat ttggtcactg
     2461 attcagataa tcatggtgca gacaattgga cttatcataa gcaaaataat ctgcaattgg
     2521 aactctatac cactaagaaa gatttagcag ctgaacaaaa ggtggagtca ttattagaca
     2581 gccaccttat ttattttgaa aaagtagaga cctatatctc atctgagaaa ctctaccaag
     2641 taacctatta catcacatta catggaggat aatatggctg aaaagaataa ggtcaccttt
     2701 ggactacaag atgtccattg ggcagaagtt acaagcgaag gttctgatgg tacattgaca
     2761 tacggcaatg tagaacgact tcgtggtgct gcagaattaa cccttgaacc aacaggagac
     2821 aagggttctt ataaggcaga caatatcaat ttttatacaa cggagtcaaa cgatggttac
     2881 gaaggaacac taaaagttgc tcttctaacg caggaatttt tgactcgagt cctcggagag
     2941 cagttggatg cgacgacaaa taccatttca gaaatcgcaa acagcgaaaa gaaaaatttt
     3001 gcgttgatgt tccgtttcga aggggataaa aaagaaacat tacacgtttt gtattattgt
     3061 tacgcatctc gtccgactgt tggttcaaaa accaagtctg gttcagatat caatgaggta
     3121 gagttgacct ttactgccag ccctcgccca cttgataagg ttgtacgtag acgtacaacg
     3181 gaggaaacga gcgatgagat tcgtgaaaac tggttcaagg cagtttttga acctcgtagg
     3241 taagggagaa ggcaatgaga gaaagtatta ccatagcagg cacgacctac gagttagcaa
     3301 ccaatgccta taccccaatc gcttataaag agcagtttgg taaggactat tttcaagatt
     3361 tattctcgat ggtcaatagt caagcaatct tagcaaaact tgacgagtta gaagatggag
     3421 aggaattaca ggcacatcat attgatgttt ctattctgtc tgatttcgat atgacatttt
     3481 tccatcgaat cttttgggtc tttgcgaagt cagccaatcc acgagtgaaa ccatttgtgg
     3541 atttttatat ggagatggaa gaatttccag tgcaggaagt agcccctgtc ttgatgaata
     3601 tgttgaacca agggatgtca accagaaaaa agcagatgaa acagaaacag cgagtgaaga
     3661 aatcttcaca gtagagagtt atttctcctg ttgtaaggag actggtctga ccattgacga
     3721 tttaaaacat atctctattg ggatggcact tgactaccaa acggactatg tggagatgcg
     3781 tactcgagaa acttctcaaa cacgacgagc aactcaagct gattttgata atttctgatg
     3841 gtagaaagga gggactatgg ctggaaatat caaggggatt acgattgaaa ttggtggcga
     3901 tacccaaccc ttacaagata cacttaaggg tgtaaacaaa caagcatctg aagctaccaa
     3961 agaattaaga cagattgata aggctctcag gtttgatact ggcaatgtca ctcttctgac
     4021 gcaaaagcag gaagtcttgg caaaacaagt cgagataacc aaagaaaaat tagcaacgct
     4081 ccgtcaagcc caatctcagg tggaagctca atttaaggct ggagatattg gggcagacca
     4141 gtaccgtgcc tttcaacgtg aggtggaaac tactcaaagg ctgctaacct cctatgaaac
     4201 taagttagct gatgtgtcat caacacttga gaatcacggt cgatctagta gttcagcggc
     4261 tcaacaatta gataaactcc aagtggagca ggggcagtta gcaagtgaga tgaacaaggt
     4321 cacgtctcaa tttgagttac aagaaagtgc tttgtcatcc aatagttccg aagcagaacg
     4381 caatgccata gcccaacaaa agataggagc acagtcagaa attgtttcta aacaaatttc
     4441 caatctcgaa aagcaactag ccctgacaaa gagtgaatat ggtgagaatt ccattgaagc
     4501 caataagatg gaagctgagt tgaaccaagc aaagaccgct ctcaataacc tgaacaacga
     4561 gatggatgat accaaatcct ctgcggatgg tgctcaagat ggcatgaaag ccatgtctga
     4621 caccattcgg gctgaggcac ttcaagcgac cagtgagaag ctagcagaca tctctcagaa
     4681 aatcttcgaa gtcggaacag agtccatgtc tgcggcagct caacttcaag ccagcaatgc
     4741 ccaattctct accgtatttg gggatatgga gaatgctgct aaggatgccc tcaataagat
     4801 tggggaagag atggacattg ttccagagcg tcttcaaggc tccttcactc agatggcttc
     4861 ctttgccaaa acctctggaa tggatacggc tcaggctttg gatctgacca ctcgtgccac
     4921 cagagcagcg gctgatgggg cagcatttta cgacaaatcc at
//
LOCUS       DBNFCX010000121         4930 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.121, whole genome shotgun sequence.
ACCESSION   DBNFCX010000121 DBNFCX010000000
VERSION     DBNFCX010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 4930)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4930)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4930
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.121"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..698
                     /locus_tag="AC1PJC_002028"
     CDS             <1..698
                     /locus_tag="AC1PJC_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HIP6621000.1"
                     /translation="REKENRVKGGLYHKIQIELAFNSNHIEGSQLTQDQTRYIYETNT
                     IGFEENSTIKVDDIIETTNHFTAFDFLLDSFQDDLNETWIKEIHAILKRGTSDSRKSW
                     FQVGDYKLYPNEVGGRETTLPEYVELDMQELLRNYHALSPTSFEDILDFHVRFERIHP
                     FQDGNGRVGRLIMFKECLKHGHVPFIIGDDMKYFYYRGLAEWGEQNGFLLDTCLAAQD
                     RFKQYLEYFRIED"
     gene            736..1434
                     /locus_tag="AC1PJC_002029"
     CDS             736..1434
                     /locus_tag="AC1PJC_002029"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006486 - protein glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HIP6621001.1"
                     /translation="MDKGKTITKEYLKTNAITAHYFEKIESRKLELFLKYTTDKLLAL
                     ILLVLLSPIIIVLSIWIKLDSKGPVFYRQERVTRYGRIFRIFKFRTMVTDADKIGSLV
                     TVGQDNRITKVGHIIRKYRLDELPQLFNVLTGDMSFVGVRPEVQKYVDQYTDEMLATL
                     LLPAGITSPASIAYKDEDIVLEKYCSQGYSPDEAYVQKVLPEKMKYNLEYIRNFGIIS
                     DFKVMIDTVLKVIK"
     gene            1447..2658
                     /locus_tag="AC1PJC_002030"
     CDS             1447..2658
                     /locus_tag="AC1PJC_002030"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HIP6621002.1"
                     /translation="MKRQNIPFSPPDITQAEINEVIDTLKSGWITTGPKTKELERRLS
                     VFTGTNKTVCLNSATAGLELVLRILGVGPGDEVIVPAMTYTASCSVITHVGATPVMVD
                     IQKNSFEMEYDALEKAITPKTKVIIPVDLAGIPCDYDKIYTILENKRSLYVASDNKWQ
                     KLFGRVIILSDSAHSLGASYKGKPAGSLADFTSFSFHAVKNFTTAEGGSVTWRPHPDL
                     DDEEMYKEFQIYSLHGQTKDALAKTQLGSWEYDIVIPGYKCNMTDIMAGIGLVQLERY
                     PSLLNRRREIIEKYNAGFEGTSIKPLVHLTEDKQSSMHLYITHLQGYTLEQRNEVIQK
                     MAEAGIACNVHYKPLPLLTAYKNLGFEMKDFPNAYQYFENEVTLPLHTNLSDEDVEYV
                     IETIKRIVVSI"
     gene            2655..3668
                     /locus_tag="AC1PJC_002031"
     CDS             2655..3668
                     /locus_tag="AC1PJC_002031"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HIP6621003.1"
                     /translation="MSYLVTVIVPVLNEENYIEELLTSIEQQSYPFSKFEVFIIDGCS
                     TDNTIKKINAFIPQSQLNISLFENPKQSQASAMNIGIRHSNAKYIIRLDAHANYQSNY
                     IEAAVNLLEETGVDNVGFYIESSGKNQFAKRVARIQSSKFGVGNSNFRTENTSTVEAD
                     TVPFGAFKRETLIELEGFDERFLCNEDNDINNRIIKKGGKILLSDRSGATYYARDNLS
                     SLVKMSLRNGKWNIISLYYNSTAMRLRHFVPLLFTSSILFCLTLSFIHVLFRYMLLAE
                     MLLYVTCALYYSKSIAKSIPDFFQTVFLFFVFHFSYGLGSLIGISNYISLLLREKSTV
                     RKD"
     gene            3676..4527
                     /locus_tag="AC1PJC_002032"
     CDS             3676..4527
                     /locus_tag="AC1PJC_002032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002384308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LicD family protein"
                     /protein_id="HIP6621004.1"
                     /translation="MGKLTPETLRQLQMKTLEMSKYFVEFCKRHDITCYFCGGGCIGA
                     IRHRGFIPWDDDLDFFIPRPDYERLKKLWIEEEHDSLELIFPSEDYNDHNIFMTLRDK
                     NTTQIKPYQQSLDINHGVAIDIFPIDGAPSSKVKRSFQLFWALVYQIYCAQLVPTNYG
                     KLVTYMGKILLKLVPSKTIKYQIWHFAEQQMSKYHFDDCDMITELCAGPRYMRNLYPK
                     KAFEDSIFVEFEGAEMPIPKGYDVYLRIAFGNYMTLPPTEQQQSHHDAIFLDLNKSYI
                     HYKGIYY"
     gene            4556..>4930
                     /gene="wzy"
                     /locus_tag="AC1PJC_002033"
     CDS             4556..>4930
                     /gene="wzy"
                     /locus_tag="AC1PJC_002033"
                     /inference="COORDINATES: protein motif:HMM:NF025654.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen polysaccharide polymerase Wzy"
                     /protein_id="HIP6621005.1"
                     /translation="MEKNIIFRIGFSILFLVLIILSLWKGINEVFTAVLIVWLGVVYY
                     CFRDLPKHFTLFSFMITFFTFLLGRDATYLFLDARSFRIISDESASNHAYWSILVSLI
                     FVFLAYYFTKASSLIRIEKYRLN"
BASE COUNT         1634 a          726 c          964 g         1606 t
ORIGIN      
        1 taagagaaaa agaaaacaga gtcaaaggag gtctttatca taagattcag atcgagctgg
       61 ctttcaactc aaaccatata gaggggagtc aactgacgca agaccagaca cggtatatct
      121 atgagacgaa taccattggt tttgaagaaa attcaaccat taaggtggat gatattatcg
      181 aaacgaccaa tcattttacg gcttttgatt ttctcttaga tagctttcaa gatgacttga
      241 atgaaacctg gataaaggag attcatgcta tcttgaagag aggcacttcc gattctcgga
      301 agtcatggtt ccaagtcgga gattataaat tatacccaaa tgaagtcggc ggtcgtgaaa
      361 cgactctacc cgagtatgtg gagttagaca tgcaagaatt gcttagaaat tatcatgctc
      421 tatcacctac ttcctttgag gatattcttg actttcatgt tcgatttgaa cgcatccatc
      481 ccttccaaga tggtaacggg cgagtaggtc gattgataat gttcaaagaa tgtctcaaac
      541 atggacatgt cccctttatc atcggagatg acatgaagta tttttactat cgtggcttag
      601 ccgagtgggg agagcagaat ggtttcttgc tggatacttg tctagcagca caagatagat
      661 ttaagcagta tttggagtat tttaggattg aggattagtt aataagaata gcgaagctta
      721 taaatgggag agtgaatgga taagggaaaa acaattacaa aagaatattt aaagacaaat
      781 gctataaccg ctcactattt tgaaaaaatt gaatcaagaa agttggaatt atttttaaaa
      841 tacactacag ataagttatt agcactaatt ctattagtat tgttatcacc aattattatt
      901 gtgttatcaa tctggataaa actagacagc aagggccccg ttttttaccg tcaagaaaga
      961 gttacaagat atggtcggat ttttagaatt tttaagttta gaaccatggt tacagatgcg
     1021 gataagattg gcagtcttgt cacagtcggt caggataatc gtattacaaa agtaggtcac
     1081 attatcagaa aatataggtt ggatgaacta cctcaactgt ttaatgtttt gactggtgat
     1141 atgagctttg ttggtgtgag accagaagtg caaaaatacg tagatcagta cactgatgag
     1201 atgcttgcaa ccttactttt acctgctgga atcacttcac cagcaagtat agcatacaag
     1261 gatgaagaca ttgttttgga aaaatattgt tctcagggct atagtccaga tgaagcctat
     1321 gttcaaaaag tgttaccaga aaaaatgaaa tacaatttgg aatatatcag aaactttgga
     1381 attatttctg attttaaagt aatgattgat acagtattaa aagtgataaa ataggagatt
     1441 gatatgatga agagacaaaa tattccattt tcgccaccag atattactca agctgaaatt
     1501 aatgaagtaa ttgatacact aaaatctggt tggattacaa caggaccaaa gacaaaagag
     1561 ctagaacgtc ggctatcagt atttacagga accaataaaa ctgtgtgttt aaattctgct
     1621 actgcaggat tggaactagt cttacgaatt cttggtgtag gacccggaga tgaagttatt
     1681 gttcctgcta tgacctatac tgcctcatgt agtgtcatta ctcatgtagg agcaactcca
     1741 gtgatggttg atattcaaaa aaacagcttt gagatggaat atgatgcttt ggaaaaagcg
     1801 attactccga aaacaaaagt tatcattcct gttgatctag ctggtattcc ctgtgattat
     1861 gataagattt ataccatctt agaaaacaaa cgctctttgt atgttgcttc tgataataaa
     1921 tggcagaaac ttttcgggag agttattatc ctatctgata gtgcacactc actaggtgct
     1981 agttataagg ggaaaccagc gggttcccta gcagatttta cctcattttc tttccatgca
     2041 gttaagaatt ttacaactgc tgaaggaggt agtgtgacat ggagaccaca tcctgatttg
     2101 gatgacgaag agatgtataa agagtttcag atttactctc ttcatggtca gacaaaggat
     2161 gctctagcta agacacaatt aggttcatgg gaatatgaca ttgtcatccc tggttacaag
     2221 tgtaatatga cagatattat ggcaggtatc ggtcttgtgc aattagaacg ttacccatct
     2281 ttgttgaatc gtcgcagaga aatcattgag aaatacaatg ctggctttga ggggacttcg
     2341 attaagccgt tggtacacct gacggaagat aaacaatcgt ctatgcactt gtatatcacg
     2401 catctacaag gctatacttt agaacaacga aatgaagtca ttcaaaaaat ggctgaagca
     2461 ggtattgcgt gcaatgttca ctataaacca ttacctcttc tcacagccta caagaatctt
     2521 ggttttgaaa tgaaagattt tccgaatgcc tatcagtatt ttgaaaatga agttacactg
     2581 cctcttcata ccaacttgag tgatgaagat gtggagtatg tgatagaaac aattaaacgc
     2641 attgtggtaa gtatatgagt tatttagtta cagttattgt accagtttta aatgaagaaa
     2701 attatatcga ggagcttttg acttcaattg agcaacagtc ataccctttt tcaaaatttg
     2761 aggtttttat tattgatggt tgttcaacag ataatacaat aaaaaaaatt aatgcattca
     2821 ttcctcagag tcaattgaat atatctttgt ttgaaaatcc aaaacaatct caggcctcgg
     2881 cgatgaatat tggaataaga cactcaaatg ctaagtacat tattaggtta gatgctcatg
     2941 ctaattatca aagtaactat attgaagcag cagtaaatct attggaggag actggggttg
     3001 ataatgtagg attttatatt gaatctagtg gaaaaaatca atttgctaag cgagtggctc
     3061 gaattcagag ttcaaagttt ggtgttggaa attctaattt tagaacagaa aatacatcaa
     3121 ctgtagaagc tgatacggtt ccgtttggtg catttaaaag agagacgttg attgaattag
     3181 aaggttttga tgaacgcttc ctatgcaatg aggataatga tattaataac cgcattataa
     3241 aaaaaggtgg taaaatttta ctatcagata ggagtggtgc tacctattat gctagggata
     3301 atctttcatc acttgtgaaa atgagtttaa gaaatggaaa atggaatatt atcagtttat
     3361 attacaattc tactgcaatg aggttgcgac attttgttcc tcttcttttt acatcgagta
     3421 tattattttg tttgacgcta agctttatcc atgtcctatt taggtatatg ctgttggctg
     3481 aaatgttgct gtacgtaacc tgtgctttat attattcaaa atcaatagct aagtcaatac
     3541 ctgatttttt ccagacagtt tttttatttt tcgtttttca tttttcttat ggacttggat
     3601 cattaattgg aatttctaac tatataagct tattgttgag agaaaaaagt acagttagaa
     3661 aggattaaat ttttaatggg caaactaaca ccagaaacat tgcgtcaact tcaaatgaaa
     3721 acacttgaaa tgtccaaata tttcgttgaa ttttgtaaga ggcatgatat aacttgctat
     3781 ttctgtggag gtggctgtat tggagcaatc agacatcgag gttttatacc ttgggatgat
     3841 gatttggact tttttattcc tcgaccagac tatgagagat taaaaaaatt atggatagag
     3901 gaagaacatg actcgcttga gttgattttt ccaagtgagg actataacga tcataatatt
     3961 tttatgactc ttcgggataa gaataccact caaattaaac cttatcaaca atctttagat
     4021 attaatcatg gagtagcgat agatattttc ccaattgatg gggctccaag cagtaaagtt
     4081 aagagaagtt tccaattatt ttgggcatta gtatatcaaa tctattgtgc tcagttagtt
     4141 ccgacaaact atgggaagtt agttacctat atgggaaaaa tattattaaa actagtacct
     4201 tcaaaaacaa taaaatatca aatttggcat tttgctgaac aacaaatgtc taagtatcat
     4261 tttgatgatt gtgacatgat tactgaacta tgtgcgggtc ctagatatat gagaaatttg
     4321 tatcccaaaa aagcatttga agattcaatt tttgtagaat ttgaaggagc tgaaatgcca
     4381 attcctaaag gatatgatgt ttacttacgt atagcatttg gtaattatat gactttacca
     4441 cccactgaac agcaacaaag ccatcatgat gctattttct tggatttaaa taaaagttat
     4501 atacattata aagggattta ttattagaga ttagagcaaa taaaggagtt gttttttgga
     4561 aaaaaatatt attttcagaa taggatttag tatcttattt ctggtattaa ttattttatc
     4621 gctttggaaa gggattaacg aagtatttac ggcagtacta attgtttggt taggggttgt
     4681 ttattattgt tttcgtgatt taccgaaaca ctttacactc ttctctttta tgattacctt
     4741 tttcacattt ttattaggta gagatgctac atatttattt ttagatgcaa gaagttttag
     4801 aattatttca gatgagtcag caagtaatca tgcatattgg tcaatattgg tatcgcttat
     4861 atttgtattt ttagcatatt attttactaa agcatcttcc ttgataagga tagagaaata
     4921 caggctcaac
//
LOCUS       DBNFCX010000122         4883 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.122, whole genome shotgun sequence.
ACCESSION   DBNFCX010000122 DBNFCX010000000
VERSION     DBNFCX010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 4883)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4883)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4883
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.122"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..645
                     /locus_tag="AC1PJC_002034"
     CDS             <1..645
                     /locus_tag="AC1PJC_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HIP6621006.1"
                     /translation="YIEMLKEYKWQIALPAVAGLLMATFLIFSQPAKSDQTGLTDFPQ
                     TAQTSSSSDLVEETSTEVSEEPSQLVVDVKGAVEKPGLYTLEAGARVNDAVEAAGGLT
                     SQADPKSINLAQKLSDEAVVYVASKDENISVVASTTASSAMSQEEKNTSLVNLNTATE
                     ADLQTISGIGAKRATDIIAYREANGGFKSVDDLNNVSGIGDKTMESIRPYVTVE"
     gene            629..2302
                     /locus_tag="AC1PJC_002035"
                     /pseudo
     CDS             629..2302
                     /locus_tag="AC1PJC_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636902.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
     gene            2433..3068
                     /locus_tag="AC1PJC_002036"
     CDS             2433..3068
                     /locus_tag="AC1PJC_002036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015057861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpXC domain-containing protein"
                     /protein_id="HIP6621007.1"
                     /translation="MTTIFLTKINCTNCGKQSTFERFDRVYAVKTPEIVSTILDWDFF
                     KFTCHNCNHMVLIDYPTVVVDEEQTTIIQYCADGNVDVLSMQICSLISEGVNLSEYRI
                     RVVSDIESFVEKVQIVSVGYDDRAIELMKYMNSPLEDGDIQFNYEHMVFTQVGHESYQ
                     FMFINNQTAVASLDFSQEQYEYYLADVEDLETKTYYIDSRWAESFSRTSLA"
     gene            3196..4308
                     /locus_tag="AC1PJC_002037"
     CDS             3196..4308
                     /locus_tag="AC1PJC_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001842570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HIP6621008.1"
                     /translation="MVRRNSKITRQQKKIRDAFVSERTVEIIPAKREFTDVKTKKLRV
                     AAYCRVSTFDESQSGSFELQKQIYTERINSNPDWIMAGIYADQGASGTSIKRREQFQQ
                     MLHDCRCGKIDLIIVKSVSRFARNQLDFISIYRELKALSPPVGIYIEDINLNTLDTNS
                     EFILGIMAIVAQGESEQKSASITWSVIERFKRGIPMIPTHNLLGYTKDQYGRVVIDET
                     EAKIVRLIYDSYIEGMTASEIASTLMTNHIPTVTGLERWTSLAVYNILRNEKYKGEII
                     MQKTYTVDCFSHKTRKNNGEKPKYRLKNGIPSIIPEPRWDLVQELLKQPRRKSKSTSE
                     IFVPKLYIKKLKSGKLRDFVVLNPSWKSEDIHAVFK"
     gene            4323..4730
                     /locus_tag="AC1PJC_002038"
     CDS             4323..4730
                     /locus_tag="AC1PJC_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015057859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621009.1"
                     /translation="MRFKDFNLEVVNVERYSSDYSMTVNKNFVTFSKGIVQALEYPAH
                     VLVAFNKDTKVMGIQVCRAKTRGAFSFSKPVGEQKGIVQVGHKNLKETLLTIMSEWKS
                     DKRYRVEGIHIPEDKAFVFELTKFEELADFRKY"
BASE COUNT         1402 a          882 c         1128 g         1471 t
ORIGIN      
        1 tatatagaaa tgcttaaaga atacaagtgg cagattgctc tgcctgcagt ggctggcttg
       61 ctaatggcga cgttcttaat attcagccaa ccagcaaagt ctgaccagac aggcctgaca
      121 gactttccac agaccgcaca aacttctagc agctctgact tggtcgagga aaccagtaca
      181 gaagtaagtg aggaacccag ccagctagtc gttgatgtca aaggagcggt ggaaaaacca
      241 gggctctaca ccttagaagc tggtgcgcgt gttaatgatg cagttgaagc agctggcggc
      301 ttgaccagtc aggcagaccc aaagtctatc aatctggctc agaagctcag cgatgaggcg
      361 gtggtctatg tggccagcaa ggacgaaaac atctcggtgg tggccagcac gactgccagc
      421 tctgctatgt cccaagaaga aaaaaacacc agtctagtca atctgaatac ggcgaccgag
      481 gctgacttgc agaccatttc tggtattggt gccaagcgag cgacggacat tatcgcctat
      541 cgtgaggcca acggtggctt caagtcagtg gatgacctca acaatgtgtc gggcatcggc
      601 gacaagacta tggaaagcat ccgcccttat gtcacggttg agtaagctcc cctgccagcc
      661 cattcacttg gctcttttgg tggtggtggc ctactttgca gtccactctt tttccctctt
      721 gacaatagga ctgctcagtt tgttgttgct ggtctttgga tttcggcaag gcaaggcagt
      781 tttcatcaaa acgctgccgc ttctagcctt atgtggtctg tttttcggat gccagaagat
      841 ccaatgggag cgggcagacc agtcagcccc agagcaagtc acaactgtgc aggtcattcc
      901 agataccatt gacattaacg gggacagcct gtcttttcgt ggtcgggctg acggacaaac
      961 ctatcaggtt ttctataaat taaccagtca ggaggagcag acctattttc aaaagctggc
     1021 agacctggtt cagctagaag tggaagcaga ggtcagcctg ccagctggtc agcggaattt
     1081 caagggcttt gactatcagg cctatctgaa aacacaggga atctatcgga cagtcaagat
     1141 aactgcgatc aagaagattg tccctgtcca gtcttggaat gtttttgact ggctatctag
     1201 ctggcggaga caggccttgg tctatatcaa aaccaatttt ccagctccta tgagtcacta
     1261 catgacaggg ctcttgtttg ggaacttgga tagtgagttt gaccagatga gtgacctcta
     1321 ttccagtttg ggtatcattc atctctttgc cctgtctggt atgcaggtag gctttttcat
     1381 cgacaagttt cgttggattt tactgcgttt gggcttgacc aaggaagccg tagataagtt
     1441 gcagattccc ttttcacttt tttatgctgg tttgacaggc ttttctgtgt cggtggtgcg
     1501 gtccttggtc caaaaaattc tgggtaatct aggcttgcgg aagttggata actttgcggt
     1561 gacagtcttt gtctgtctgc tgatactccc ccgattttta ctgacagctg gcggtgtctt
     1621 gacctttacc tatgctttct tgctgacggt ttttgatttt gaggacttgg ggcaggtcaa
     1681 aaaggctgca gtggagagtc tcagtatttc gctgggaatt ttgccggtgc tgatgaccta
     1741 tttctttgcc ttccagcccc tgtctattct cttgaccttt gtcttttcct ttgtctttga
     1801 tgtcctgctt ttgccaggct tgtcggtcat ttttctctta tcaccaatta tcaagattac
     1861 ctgggtcaac ggatttttcg tttttatgga gaaaatcatt gtctgggtgg cggatttggg
     1921 ctttcggcct tggatactgg gcaagccgtc tgagctggtc ctcttgcttt tgctggtcag
     1981 cctcttcttg ctctacgatt tccacaggag aaagaaatgg cttctaggac tgagcttggt
     2041 cctcgctcta ctatttttca tcaccaaaca cccgctggaa aacgaggtga cggtggtgga
     2101 catcgggcag ggggacagca tctttttgcg ggatatgcgg gggcggacgg ttctgattga
     2161 tgtgggtggt cgggtcgatt ttgcggccaa gaaggagtgg caggagcggt cttcgcaggc
     2221 aaatgcagag cggactttga ttccctatct gcatagtcgg ggtgtggata ggattgatag
     2281 tttggtcctg acgcacaccg aagtgtgagt tctgaaattg atacaataca acttaacttt
     2341 ttttgaaaaa aattccaaaa tttattttgc attgcgaata taataagtga gagcaagttg
     2401 cttacttaat aatgatgaag aggaaaagta gaatgacaac aattttttta acaaaaataa
     2461 actgcactaa ttgcggaaaa caaagtactt ttgaaagatt tgatagggtt tatgcggtga
     2521 agacccctga gattgtttct actattttgg actgggattt ctttaaattt acctgccata
     2581 actgtaacca tatggtgcta attgattacc caacagtcgt agtagatgaa gaacaaacaa
     2641 caattattca gtattgtgca gatggtaatg ttgatgtact ttcaatgcaa atatgctctt
     2701 tgatttcaga gggtgtcaat ctcagtgagt atagaattcg agtagtttcg gatatagagt
     2761 cttttgttga gaaggtacag attgtttcag tagggtatga tgacagagca attgagctta
     2821 tgaagtatat gaatagtcct cttgaggatg gtgatattca gtttaactat gaacatatgg
     2881 ttttcaccca ggttggacat gaaagctatc aatttatgtt tattaataac cagactgcag
     2941 tagcatctct cgacttttct caagaacaat atgagtacta ccttgctgat gttgaggatc
     3001 tagaaactaa aacatattac atagattcta gatgggcgga atcattctct cgtaccagtt
     3061 tggcataaaa ttcaaaatct atttataagt atgaatggcc tgatttttgg ttaggtcatt
     3121 tttatcttct aatttagaaa aacgtagtta atatatataa ttattatgta gatttctaga
     3181 aaggaggtaa aaccaatggt aagacggaat tctaaaatta ctcgtcaaca gaagaaaatt
     3241 cgagatgcat ttgtatctga gagaactgtt gaaattattc ctgcaaagcg agagttcact
     3301 gatgttaaaa ctaagaagtt acgtgttgct gcatattgtc gagtaagtac ttttgacgaa
     3361 tctcagtcag gtagttttga acttcaaaaa caaatctata ctgaaagaat caatagtaat
     3421 cctgattgga taatggctgg aatctatgct gaccaaggag catcaggaac atcaatcaaa
     3481 cgacgtgaac aattccaaca gatgcttcat gattgtagat gtgggaagat tgacttgata
     3541 atcgttaaga gtgttagcag gtttgctcgc aatcagcttg atttcattag tatttaccga
     3601 gagttgaagg cactatcccc tccagttgga atatatatcg aagatataaa tttgaataca
     3661 ctagatacga atagtgaatt cattcttggt attatggcca tagtagctca aggtgagagt
     3721 gaacaaaaaa gtgcgtcaat tacatggtct gtaattgaac gctttaaaag agggatacca
     3781 atgattccta cccataacct tcttgggtat acgaaagacc agtatggtcg agtagtgata
     3841 gatgagacag aagcaaaaat tgttcgcctt atatatgact cgtacattga aggtatgact
     3901 gcaagtgaga ttgcctcaac tttaatgact aatcatatac caacagttac tggtttggag
     3961 cgttggacaa gtttagctgt ttataacatt ctcaggaacg agaaatataa aggcgaaatc
     4021 atcatgcaga aaacatatac tgttgattgt tttagtcata aaacacggaa aaataatggt
     4081 gaaaagccaa aatatcgatt aaaaaatgga attccctcta tcataccaga accaagatgg
     4141 gatttagtac aagaattact caaacaacct agaagaaaat cgaaatctac ttctgagata
     4201 tttgtaccta aactctacat caagaaactc aaatctggta agttgaggga ttttgttgta
     4261 cttaatccta gttggaagtc ggaagacatt cacgcagttt ttaaataaga aagaggtaaa
     4321 ttatgcgttt taaagatttt aatcttgaag ttgttaatgt tgaacgttac tcatcagatt
     4381 atagtatgac agtgaacaag aactttgtta catttagtaa gggaattgtc caagctttag
     4441 aataccctgc acatgtactt gtcgctttta ataaggatac aaaggtaatg ggtatacaag
     4501 tttgtcgggc aaaaactagg ggagcatttt ctttttcaaa acctgttggg gagcaaaaag
     4561 gtattgttca ggtaggtcat aaaaatttaa aagaaacact cttaacaatc atgagtgaat
     4621 ggaaatctga taagcgttat agagtagagg ggattcacat tcctgaagat aaggcttttg
     4681 tttttgaact aactaagttt gaagagttgg ctgattttcg taagtattag gatagtacta
     4741 ccaaatactt gaattcaact gttaataaat attgagattg aagtagtgac acatttatta
     4801 gtgtctctac tttttttatt ttgtgtaggc gttttcatgg tataatatgg tagaaatgta
     4861 atcttttaat attggaataa aaa
//
LOCUS       DBNFCX010000123         4840 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.123, whole genome shotgun sequence.
ACCESSION   DBNFCX010000123 DBNFCX010000000
VERSION     DBNFCX010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 4840)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4840)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4840
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.123"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            292..1275
                     /locus_tag="AC1PJC_002039"
     CDS             292..1275
                     /locus_tag="AC1PJC_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-related sulfurtransferase"
                     /protein_id="HIP6621010.1"
                     /translation="MSKDIRVLLYYKYVPIENAEAYAAEHLAFCKSIGLKGRILIADE
                     GINGTVSGDYETTQKYMDYVHANPLFSDLWFKIDEENEQAFKKMFVRYKKEIVHLGLE
                     DNDFDSDIDPLVTTGAYLSPKEFKEALLDEDTVVLDTRNDYEYDLGHFRGAIRPDIRN
                     FRELPQWVRDNKEKFMDKRVVVYCTGGVRCEKFSGWMVREGYKDVGQLHGGIATYGKD
                     PEVRGELWDGKMYVFDERIAVDVNHVNPVVVGKDWFDGTPCERYVNCGNPFCNRRILT
                     SEENEHKYVRGCSAECRAHERNRYISENGLTRQEWAERLEAIGETLTPANA"
     gene            1602..1850
                     /locus_tag="AC1PJC_002040"
     CDS             1602..1850
                     /locus_tag="AC1PJC_002040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621011.1"
                     /translation="MPEGGNLILMQADSFAQRVPFQVVASGNEVLISLNVASRKEVDR
                     HIDCVEANGGQITGCPTDAVAFMEQVLRTLMGIILMRL"
     gene            1962..3635
                     /locus_tag="AC1PJC_002041"
     CDS             1962..3635
                     /locus_tag="AC1PJC_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006595745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6621012.1"
                     /translation="MKKIIEFKDFTFKYQAQQEPTLKDIQLTIYQGEKVLIIGPSGSG
                     KSTIGQCLNGIIPNIYKGEHSGSLLLDGQEAFNLSVYDKSLLVSTVLQDTDGQFIGLS
                     VAEDLAFALENDMESQVVMKQKVGDWAERLSLTDLLAHRPQDLSGGQKQRVSLGGVLI
                     DESPILLFDEPLANLDPKSGQDTIDLIDRLHKQEGTTTIIIEHRLEDVLYRQVDRVVL
                     INDGRILFNGGPDDLLRTSLLQENGIREPLYLSTLRALGYPIAQAERLSSVWEIDIEA
                     LNIASLPTLHFENGEKEALLEVKHLHFSYPNKQVLTDIQLTIHKGERLAIVGKNGAGK
                     STLAKVLCGFIQGEGEILWKGQSIKEDSVKERAERIGYVLQNPNQMISQTMIFDEVAL
                     GLRMRGVTEEEIEHRVHHILKVCGLYPFRNWPISALSYGQKKRVTIASILVLNPEIIL
                     LDEPTAGQDQRHYREMMEFLDQLNAQGHTIVMITHDMQLMLDYSDRAVVVVDGQIIED
                     ASPAEILSDDTVIERANLKETSIFHLAERVGVNPLELTTFYMQEERRGR"
     gene            3632..4465
                     /locus_tag="AC1PJC_002042"
     CDS             3632..4465
                     /locus_tag="AC1PJC_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     component T family protein"
                     /protein_id="HIP6621013.1"
                     /translation="MSQQKLIGYHPGTGLIHSLSAVSKLLFFLIVSILAMITYDTRLI
                     LFIAVFSLALFKMSGIRYKEISLVLILTIIFAAMNALMVHLFAPRYGVELYGADTPLL
                     SGLGVYSLTSQQAFYLVNLLLKYFCTVPLAIIFLMTTHPSQFASSLNQIGVSYKVAYA
                     VSLTMRYIPDIQEEFYTIRMSQEARGLELSRKGKLMDRIKGNLSLVIPLIFSSLERID
                     TISTAMELRRFGKNKKRTWYTQQPLQRIDYAVLLFILALVVVTIYLFFVNQGRFYNPW
                     R"
     gene            4625..4828
                     /locus_tag="AC1PJC_002043"
     CDS             4625..4828
                     /locus_tag="AC1PJC_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HIP6621014.1"
                     /translation="MVQGTVKWFNAEKGFGFITQENGPDVFAHFSEIQSDGFKSLEDG
                     QKVTFEVEQGQRGLQATNITKIG"
BASE COUNT         1399 a          874 c         1099 g         1468 t
ORIGIN      
        1 tcgtcttccc gcccccgcac agttgattag gtcagatttg gagtgtaaaa cacgaacaaa
       61 tctgccaatc aaccactgcg ctgagatgtt gacacgaccc ttgagaagcg aggtcggtct
      121 ttttgcccag cctcattttt tacatataag cactgaacct gcgaatagag gttctaaatt
      181 ttcagttcag atttttgtct tttgaggggc taaacgatat aatcgtaagg tatcatttat
      241 tagaaatgac agagttttat catctattgc aaagattgag aaggagaaat catgtcaaaa
      301 gacattcgtg tattacttta ttataaatat gtcccaattg aaaatgcgga agcctatgct
      361 gctgagcatc tagctttctg taagtctatc ggactcaaag gacgtatttt gattgctgat
      421 gagggaatca acggtactgt ttctggtgac tatgaaacaa ctcaaaagta catggactac
      481 gttcatgcaa acccattgtt cagcgatttg tggtttaaga ttgatgaaga aaatgagcaa
      541 gctttcaaga aaatgtttgt tcgttataaa aaagaaattg ttcaccttgg tctagaagac
      601 aacgacttcg acagtgacat tgacccgcta gtgacaacag gtgcctacct gtcaccaaaa
      661 gaattcaagg aagctctttt ggacgaagac acagttgttt tggatacacg taatgactac
      721 gagtatgacc ttggtcactt ccgcggtgcc atccgcccag acatccgcaa cttccgtgag
      781 ttgccacaat gggtccgtga taacaaagag aaattcatgg acaagcgcgt agttgtttac
      841 tgtactggtg gtgttcgctg tgaaaaattc tcaggctgga tggttcgtga aggctacaag
      901 gatgtcggcc agctccacgg tggtatcgca acctatggta aagacccaga agttcgtggt
      961 gaattgtggg atggcaagat gtatgtcttt gatgagcgta tcgcggtcga tgttaaccat
     1021 gttaacccag ttgtcgttgg taaggactgg ttcgatggca caccatgtga gcgctatgtc
     1081 aactgtggca atccattctg taaccgtcgt attttgacat cagaagagaa tgagcacaag
     1141 tatgttcgtg gctgctcagc tgaatgccgt gcccacgagc gcaaccgtta catttctgaa
     1201 aacggcttga ctcgtcaaga atgggcagaa cgcttggaag cgattgggga aactcttact
     1261 ccagcaaatg cttagtaata ccaaaattgc attgagaaat cagtgcaatt tttttgtgca
     1321 atcagaattc tttatatttt ttcagtccat tctatacgaa gcctatcaat tagaaaagag
     1381 aaggggatga agtcattttg gatgaactta tccccttcga aaatcaacat tatccgttgt
     1441 caacttgcct tgatgaactt cagttctatc ttcggcttcg tttcctcggt cacttttgat
     1501 tttcattgag tattagcggt agcagacctt gaatagctgg tcggttttat gaagcaatcg
     1561 gttttgcggt tgcgacgttt ggagatatta agtctgcgac tttgcctgag ggtggcaact
     1621 tgattttgat gcaggcagat agctttgctc aacgcgtacc atttcaggta gtagcgagtg
     1681 gcaatgaagt cttgatttcg cttaatgtgg cgagtaggaa agaagtggat agacatatcg
     1741 actgtgttga agcaaatggc gggcaaatta caggatgccc gacagatgcc gtggctttta
     1801 tggagcaagt tttacggacc ttgatgggca tcattttaat gcgattgtga ggcaagaagg
     1861 tagaattcat ctgctctaga atcatagatg aacttatttg aaaagggaga aactgatgat
     1921 tcttcctttt tttcagagtc aatttacgct ataatagtcc tatgaaaaaa atcattgagt
     1981 ttaaagattt tacatttaaa taccaagcgc aacaggaacc cactttaaaa gatattcagt
     2041 taacgattta tcagggagag aaagttctga ttattggccc atctggttca ggaaagtcga
     2101 cgattggaca atgtcttaat ggtattattc ccaatattta caagggagaa catagcggaa
     2161 gtttactact ggatggtcag gaagctttta atctttcagt ttatgataag tccttactcg
     2221 tatcaacggt tcttcaagat acagatggtc aattcattgg tttatcagtt gccgaggacc
     2281 tagcttttgc tttggaaaac gacatggaaa gccaggtggt gatgaagcaa aaagtaggag
     2341 attgggcaga aagactatct ttgaccgatt tgctggcaca tcgaccacaa gatttatctg
     2401 gaggtcaaaa gcaacgtgtc agtctgggcg gagttcttat tgatgagagt cctattttgt
     2461 tgtttgatga gcctcttgct aatttagacc ccaaatcggg ccaagataca attgatttga
     2521 ttgaccgtct gcacaagcaa gaagggacca caaccattat tatcgaacac cgtttagagg
     2581 acgtactgta tcgtcaggtg gaccgagttg tattgattaa tgacggtcgg attttgttca
     2641 atggaggacc ggatgattta ttacgtacct cattgttaca ggaaaacggc atccgtgaac
     2701 ccttatatct atcgactctt cgcgccttag gatatccgat tgcgcaggca gaacgcctct
     2761 cttcagtttg ggaaattgat attgaggctt tgaatatagc atccctaccg actctacact
     2821 ttgaaaatgg agagaaagag gctttgttag aagtcaagca tcttcatttt tcctatccta
     2881 acaaacaagt tcttacagac attcaactga cgattcataa gggagaacgt ctagctattg
     2941 ttggaaaaaa tggtgctggg aaatctactt tagccaaggt gctctgtggt tttattcagg
     3001 gtgagggtga gattctctgg aaggggcagt caatcaaaga agattctgtc aaagagcgag
     3061 cagaacggat tggttatgtt cttcagaatc ccaaccaaat gattagccaa acgatgattt
     3121 ttgatgaggt tgcccttggt ttgcgcatgc gaggggtgac agaagaagaa attgaacacc
     3181 gagttcacca tatcttgaaa gtatgtggcc tgtatccgtt tcgtaattgg ccgatttcgg
     3241 cactttcgta tgggcagaaa aaacgggtaa cgatagcatc tatcttggtt ctcaatccag
     3301 aaattatttt gctagatgag ccaacagcag gacaagatca acgacattat cgggaaatga
     3361 tggagttttt ggatcaatta aatgctcaag ggcacaccat tgtcatgatt acccatgaca
     3421 tgcaactcat gctagattat tcagatagag ctgttgttgt ggtggatggg cagattattg
     3481 aagatgccag tccagcagaa attttatctg atgatacggt gattgagcga gccaatttaa
     3541 aagaaacatc aatttttcac ttggcggaga gggtgggagt taatccctta gaactaacga
     3601 cgttttatat gcaggaagaa aggagaggaa gatgagtcaa caaaaactaa ttggttacca
     3661 tccaggaact ggcttgattc atagtttatc ggctgtcagt aaattactct tttttctcat
     3721 agtttccatt cttgctatga ttacttacga tactcgcttg attcttttta tcgcagtatt
     3781 ttctctagcc ttgttcaaaa tgtcagggat tcgttataaa gaaatctctc ttgttttaat
     3841 tctgaccatc atttttgctg caatgaatgc tctgatggtt cacttgtttg caccacggta
     3901 tggagtggaa ctttacggag cagacactcc cttgctatca ggtctgggag tttattcctt
     3961 gacgagtcag caagcatttt atctggtgaa tcttctcttg aagtattttt gtacagttcc
     4021 tttagcgatt atctttctca tgactactca tcctagccag tttgcttcca gcttgaatca
     4081 aattggggta tcctacaaag ttgcttacgc agtcagtttg accatgcgtt atattccaga
     4141 tattcaagaa gagttttata cgattcgaat gtctcaagaa gcgcgtggtt tggaattgtc
     4201 caggaaagga aaattgatgg atcgtataaa agggaatcta tcccttgtca ttcctctaat
     4261 tttcagctcc ttggagagga ttgatacgat ttcaacggct atggaattgc ggcgttttgg
     4321 aaaaaataaa aaaagaacat ggtataccca acagcctcta caaagaatag attacgctgt
     4381 cttgctattt attcttgctc tagtagtcgt gacaatctat ctattttttg ttaatcaggg
     4441 tcgattctat aatccgtggc gatgattatt gagtttattg gacttatcaa ccctttatcg
     4501 ttgacatata ggaaatatac tgttacagta gggaatgtaa ataaatttag agtttaagta
     4561 tcagtttcat cttttgtttt tcctcttgat aagttttaca aataaataaa aagaggtaac
     4621 acaaatggta caaggtacag ttaaatggtt taatgcagaa aagggatttg gttttattac
     4681 tcaagaaaac ggtccagatg tatttgcaca cttttctgaa attcaatcag atggttttaa
     4741 gtcgctggaa gatggtcaga aagtgacatt tgaagtggag caaggccaac gtggtcttca
     4801 agcaaccaat attacaaaaa ttggataata aaagagggag
//
LOCUS       DBNFCX010000124         4818 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.124, whole genome shotgun sequence.
ACCESSION   DBNFCX010000124 DBNFCX010000000
VERSION     DBNFCX010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 4818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4818
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.124"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            23..1192
                     /locus_tag="AC1PJC_002044"
     CDS             23..1192
                     /locus_tag="AC1PJC_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HIP6621015.1"
                     /translation="MKTRKFAVALATFASAALLAACGNVSTTNTSAAGSSVGDTFKIG
                     YNLELSGAVSSYGQTEEKGANLAVKEINAAGGIDGKKIEVITKDNKSETAEAATVATS
                     LASEGANVVIGPATSGASAASIPALTSAGVPMITPSGTQTNLVVNDKGEVQEYFFRTT
                     FTDGYQGQIMAKYATENLSAKKVVLYFDNSSDYGKGVAEAFKKAYTGEIVSEITFASG
                     DKDFQAALTKLKDKEFDAIIMPGYYNETGTIVKQARGLGIDKPILGSDGFDSPQFTEL
                     ATASAASNVYYLSAFVTSASEKAKAFYDAYVKEYNEEPSMFSALAYDSVYMAAEAAKG
                     AADSAAVKDNLAALKDFEGVTGTMSVDKEHNVVKSVYVVGLTNGEESSVDTISID"
     gene            1394..2281
                     /locus_tag="AC1PJC_002045"
     CDS             1394..2281
                     /locus_tag="AC1PJC_002045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002897070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HIP6621016.1"
                     /translation="MLQQLVNGLILGSVYALLALGYTMVYGIIKLINFAHGDLYMMGA
                     FMGYFLLNNLTFIADGGMRFFVALILAMVGTAILGVVIEFLAYRPLRNSTRIAALITA
                     IGVSFFLEYTMVKFFTADVKAFPQAIEAVTFNLGPVSVTNIQLIILGVSLVLMVALQL
                     IVKRTKMGKAMRAVSVDSDAAQLMGINVNRTISFTFALGSALAGAAGVLLGLYYNQIE
                     PLMGMTPGLKAFVAAVLGGIGIIPGAALGGFVIGIIETFTYVIGLDTFRDAIVYAVLI
                     IILLVRPSGILGKNVKEKV"
     gene            2284..3231
                     /locus_tag="AC1PJC_002046"
     CDS             2284..3231
                     /locus_tag="AC1PJC_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HIP6621017.1"
                     /translation="MKQNLKVNAIWLAILLAGFGLIQGLVSAGILNFYYIQIVQQIGI
                     QIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAVGILGKMMPTYGGFAIALIVGMLISG
                     AVALLVGIPTLRLKGDYLAIATLGVAEIIRILIINGGSVTNGAAGIMSIPLFTSWPLV
                     YIFVIITTLVTVNFLRSPMGRATISVREDEIAAESVGVNPTFVKVSAFVFGAMTAAIA
                     GGLHAGYVGTIVPKDFAFMTSVNVLIIIVLGGLGSITGTFVAAIVLGILNVFLKSYSD
                     ISMIIYSLALILLMIFRPGGLLGTKEFSVAALLKKKEVK"
     gene            3231..3995
                     /locus_tag="AC1PJC_002047"
     CDS             3231..3995
                     /locus_tag="AC1PJC_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002913097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6621018.1"
                     /translation="MALLEVKDLTKNFGGLTAVGDVTMELHEGELVGLIGPNGAGKTT
                     LFNLLTGVYEPSEGTISLAGTILNGKAPSKIASLGLGRTFQNIRLFKNMTVLENVLIG
                     LGNHGKSEVFTSFFRLPAFYKNEEALKTKAIELLKIFDLDGDADTLAKNLPYGQQRRL
                     EIVRALATEPKILFLDEPAAGMNPQETAELTQLIRKIKEEFGITIILIEHDMSLVMEV
                     TERIYVLEYGRLIAHGTPEEIRNNKRVIEAYLGGEA"
     gene            3995..4705
                     /locus_tag="AC1PJC_002048"
     CDS             3995..4705
                     /locus_tag="AC1PJC_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000062217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6621019.1"
                     /translation="MAMLEVKNLSVNYGVIEAVKDVSFEVNEGEVVTLIGANGAGKTS
                     ILRTISGLVRPSAGTISFLGNEIQKVPARKIVADGLSQVPEGRHVFAGLTVMENLEMG
                     AFLRNNREENQANLKKIFARFPRLEERKNQDAATLSGGEQQMLAMGRALMSQPKLLLL
                     DEPSMGLAPIFIQEIFDIIQDIQKQGTTVLLIEQNANKALAIADRGYVLETGKVVLSG
                     TGKELLASEEVKKAYLGG"
BASE COUNT         1333 a          880 c         1092 g         1513 t
ORIGIN      
        1 aagaaagatt taaggagttt tcatgaaaac aagaaaattt gcagtagcgc ttgctacatt
       61 tgcctctgca gctctactcg ctgcatgtgg taatgtttcg acaaccaata cttcagccgc
      121 aggttcttct gtaggtgata catttaaaat cggctacaac ttggagttgt caggtgctgt
      181 ttcatcttat ggtcaaacag aggaaaaagg tgccaacctt gccgtgaaag aaatcaatgc
      241 tgcgggtggt attgacggca aaaaaatcga agtgatcaca aaagataaca agtctgaaac
      301 agcagaggca gcaactgttg caacaagctt ggcaagtgaa ggggcaaacg ttgtgattgg
      361 ccctgctaca tcaggagctt cagcagcctc tattccagca ttgacatctg ctggtgttcc
      421 tatgattact ccttcaggaa ctcaaacaaa cttggttgtg aacgataaag gtgaggtcca
      481 agaatacttc ttccgtacaa cctttacaga tgggtatcaa ggtcaaatta tggctaaata
      541 cgctactgag aacttgtcag ctaagaaagt tgttctttac tttgacaact cttctgatta
      601 tggtaagggt gtagcagagg cgttcaagaa agcatacaca ggagaaatcg tttcagaaat
      661 cacatttgct tctggtgata aagatttcca agctgctttg acaaaattga aagataagga
      721 atttgatgct atcatcatgc ctggttacta caatgaaaca ggtacaattg tgaagcaagc
      781 acgcggtttg ggtattgaca agccaattct tggttcagat ggttttgact caccacaatt
      841 tactgaattg gcaacagcat cagcagcatc aaatgtttac tacctttctg catttgtaac
      901 atcagcaagt gaaaaagcaa aagcattcta tgatgcctat gtgaaagaat acaatgaaga
      961 gccatcaatg ttctcagctc tagcttacga ctcagtttac atggcagcag aagcagcaaa
     1021 aggtgcagct gattcagcag ctgtgaaaga taaccttgca gctctgaaag actttgaagg
     1081 tgtgactggt acaatgtctg ttgacaaaga gcacaatgtc gttaaatcag tttatgttgt
     1141 tggtttaaca aacggagaag aatcatctgt agatactatc tctattgact aatagtggat
     1201 gaaaagaggg aattccctct ttttcacttg tcagaatgta taggaatagt atacatgcgg
     1261 atataaaatt tggttaaaat ttctgtaatt ttaatgatta aactctctat ctaacttgct
     1321 tattttcaga aaattttgta taatgtaaca atgctattga gctcgaaaaa tatttagaaa
     1381 gattggtgaa cctatgcttc aacaacttgt caatggtttg attcttggtt ctgtttatgc
     1441 ccttttggcc cttggttata ccatggtgta cggaattatc aaactcatta acttcgccca
     1501 tggtgatttg tatatgatgg gtgcttttat ggggtacttc ctattaaata atttaacttt
     1561 tattgcagat ggtggaatgc gtttctttgt tgctctcatt ttagcgatgg tagggacggc
     1621 tattctcggt gtcgttatag agtttttagc ctatcgtcct ttgcgtaatt caacgcgtat
     1681 agcagctttg attacggcta tcggtgtatc cttcttcttg gaatacacta tggtcaaatt
     1741 ctttacagca gacgtaaaag cctttccaca agccatcgag gctgtgacct ttaaccttgg
     1801 cccagtttct gtaaccaata tccagttgat tattcttggt gtatcgcttg tgttgatggt
     1861 cgctcttcaa ttaattgtca aacgtacaaa aatggggaaa gccatgcgtg cggtctctgt
     1921 agatagcgat gcagctcagc taatggggat caatgtaaac cgtacaatca gctttacttt
     1981 tgctcttggt tcagctcttg caggggcagc gggtgttctc ctaggtctct actataacca
     2041 gatagagcct ttgatgggga tgacgccagg tctgaaagcc tttgttgcgg cagtattggg
     2101 cggtatcggt attattccag gtgcagcact tggtggattt gttatcggta ttattgaaac
     2161 atttacatat gtaatcggtt tggatacttt ccgtgatgcg attgtttatg ctgttttgat
     2221 cattatcctc ttggtgcgtc caagtggtat tcttggtaaa aatgtgaaag agaaggtgta
     2281 accatgaagc aaaatttaaa agttaatgcg atttggttgg ctatcttatt ggctggtttt
     2341 ggacttattc aaggtcttgt atcagcaggg attctgaatt tttactacat ccagattgtt
     2401 cagcaaatcg gtattcaaat tatcttggca gttggtttaa acttgattgt tggtttctcg
     2461 ggtcaatttt cacttggaca tgctggattt atggctattg gtgcctacgc agtaggtatt
     2521 cttgggaaaa tgatgccgac ttatggtgga tttgctatcg ctttgattgt tgggatgtta
     2581 atctcaggtg cagtggctct tttagttggt attccaaccc ttcgtttgaa aggtgactac
     2641 cttgcaattg cgactcttgg tgttgcagag attattcgta ttttaattat caatggtggt
     2701 agtgtgacga atggtgcagc aggtattatg tctattccac tctttacaag ctggccttta
     2761 gtttatattt ttgtaatcat cacaaccttg gtgacagtta actttttgcg cagtccgatg
     2821 ggacgtgcta caatttctgt tcgtgaggat gaaattgcgg cagaatctgt aggtgtcaat
     2881 ccaacatttg ttaaagtttc agcctttgta tttggtgcca tgacggcagc cattgcaggt
     2941 ggtctccatg caggatacgt tgggacaatt gttccgaaag actttgcctt tatgacctcc
     3001 gttaacgttt tgattatcat tgtattgggt ggtttgggct ctatcacagg tacctttgta
     3061 gcagccattg tacttggtat tttgaacgta ttcctcaaga gttactctga tatttcaatg
     3121 attatctatt cattagctct tattctcttg atgattttcc gtcctggagg tcttttggga
     3181 actaaggaat tcagcgttgc ggctctactc aagaagaagg aggttaagta atggcattac
     3241 ttgaagtaaa agatttaacc aagaacttcg gtggcctgac tgccgttggt gacgtgacca
     3301 tggaacttca tgaaggggaa ttggttggtc ttatcggtcc aaacggtgct ggtaaaacga
     3361 ctcttttcaa cctcttaaca ggtgtttatg agccaagcga ggggacaatt tctcttgcag
     3421 ggactatttt gaacggtaaa gcaccatcaa aaattgcttc gcttggtcta ggtcgtactt
     3481 tccagaacat tcgtttgttc aaaaatatga ccgttttgga aaatgttttg attggtcttg
     3541 gcaaccatgg taaatcagaa gtatttacaa gtttcttccg tcttccagca ttctataaga
     3601 atgaagaagc gttgaaaaca aaagcgattg aacttttgaa aatcttcgat ttggatggag
     3661 atgcagatac attagctaaa aatcttcctt acggtcaaca acgacgtttg gaaatcgttc
     3721 gtgcccttgc gactgaaccg aaaattcttt tcttggatga accagcggct ggtatgaacc
     3781 cacaagaaac ggcagaattg acccaactca tccgtaaaat caaagaagaa tttggcatta
     3841 ctatcatctt gatcgaacac gatatgagct tggttatgga agtgacggag cggatatacg
     3901 tattggagta cggtcgtttg attgcccatg gtacaccaga agaaattcgt aataacaagc
     3961 gtgtaattga agcctacctt ggaggtgaag cttaatggca atgttagaag taaaaaatct
     4021 ttccgttaac tacggtgtta tcgaagctgt taaagatgtt agctttgagg ttaatgaagg
     4081 tgaagttgta acccttatcg gtgctaatgg tgctggtaaa acctctatcc ttcgtactat
     4141 ttcaggactt gttcgtccat cagctggaac gatttctttc cttggaaatg agattcaaaa
     4201 agttcctgct cgtaaaatcg ttgcagacgg tttgtcacaa gttccagaag gtcgacatgt
     4261 ctttgcaggc ttgactgtta tggaaaactt ggaaatgggt gcttttcttc gcaataatcg
     4321 tgaagaaaat caagccaact tgaaaaaaat cttcgcacgt tttccacgtt tggaagaacg
     4381 taaaaaccag gatgcagcta ccctttcagg tggggagcaa cagatgttgg ccatgggacg
     4441 tgccctaatg agccaaccaa agctcttgct ccttgatgaa ccatcaatgg gtttggctcc
     4501 gatctttatc caagaaattt ttgatatcat ccaagatatt caaaaacaag gaacaactgt
     4561 cctcttgatt gagcaaaatg ccaacaaagc tctcgctatt gcagatcgtg gctatgttct
     4621 agaaacagga aaagttgtcc tctcaggaac aggaaaagaa ctcctcgcct cagaagaagt
     4681 caaaaaagca tatctgggtg gctaaaatga ggctgacgcc tcattttagg ttggaaatag
     4741 ggaccgtcgg cagacggtct ttccttttat tcattttttg gaccttttta agttggagat
     4801 gagaaacgcc gagaggcg
//
LOCUS       DBNFCX010000125         4816 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.125, whole genome shotgun sequence.
ACCESSION   DBNFCX010000125 DBNFCX010000000
VERSION     DBNFCX010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 4816)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4816)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4816
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.125"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(166..2022)
                     /locus_tag="AC1PJC_002049"
     CDS             complement(166..2022)
                     /locus_tag="AC1PJC_002049"
                     /inference="COORDINATES: protein motif:HMM:NF013954.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HIP6621020.1"
                     /translation="MATTANKILVEAKKYIGVSGGTTTHKMFIDTYNSVSPLPQGYAV
                     KYHDDWCDAFISFLAIKTNAIDIIGRECGVDRHISIFKQLGIWNEDGNIVPKPGAIIT
                     FHWSKTTQPNDGFADHIGIVEKVEGNYVHTIEGNSSNAVARRSYVIGDGRIRGYAFPR
                     YISSSAEYSGGSLVNAGNMISQENIRLLIKYSQKYSLKPSFLLAQMFIESHWGNPNVS
                     SVGQVDNNWSGISEPFHAPTHLGISMRRGTARPTSEGGYYVHFNSMEDYFKAYTYILS
                     NENGLYKVSNVNNIDDFCKGLFRIGGAKSDYAGSGFEHYKSLLLPTYEAIKRQNNGKL
                     ELIDSSVDYALGNYTDSSTAPSIPFTRISETGRFYPNQTVTIRNHPSRSGGVVGRYNS
                     GESFSYDSYVVNDGHIWLSYVSYSGERRYVAWRVQNGTKFGTIDEPNSTSGSQNSTQF
                     TRVPETGRFYPNQTVTIRNHPSRSGGVVGQYNSGESFSYDSYVVNDGHIWLSYVSYSG
                     ERRYVAWRVQNGTKFGTIDEPNSTSGSQNSTQFTRVPETGRFYPNQTVTIRNHPSRSG
                     GVVGQYNSGESFSYDSYVVNDGHIWLSYVSYSGERRYVAWRVQNGAKFGTIV"
     gene            complement(2393..2788)
                     /locus_tag="AC1PJC_002050"
     CDS             complement(2393..2788)
                     /locus_tag="AC1PJC_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin family protein"
                     /protein_id="HIP6621021.1"
                     /translation="MKELLTINKILFSMIGGLIGSLFGELDGILYALLVFIIIDYLTG
                     IFVAVVEKQLSSSIGFRGIFKKIAILFLVSLGHMIDTAIIKQGGTIRTMVIFFYLSNE
                     GLSILENTVRIGLPIPEKLQAILKQINER"
     gene            complement(2766..3134)
                     /locus_tag="AC1PJC_002051"
     CDS             complement(2766..3134)
                     /locus_tag="AC1PJC_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621022.1"
                     /translation="MALLNIDKVTEPFDLETALAYMRKNGEFIRCKTAEQDFYMYLEE
                     VRRPAIKNGKRQLITTETVWAFNQWGSTTLTLNLSDLFHDCFYLMRFDENGQPDWSDP
                     IIVEEGSVESEVTDEGTVNY"
     gene            complement(3140..3346)
                     /locus_tag="AC1PJC_002052"
     CDS             complement(3140..3346)
                     /locus_tag="AC1PJC_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621023.1"
                     /translation="MNLEQINQSLKLTIQELVTKLSDEITAKNLIAIQLVERDEELSQ
                     LRKEKQELTELLEVQTKPEEGKGE"
     gene            complement(3359..>4816)
                     /locus_tag="AC1PJC_002053"
     CDS             complement(3359..>4816)
                     /locus_tag="AC1PJC_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gp58-like family protein"
                     /protein_id="HIP6621024.1"
                     /translation="SKVHLYVHISADEITFDPAVTTRTMKLQGPILDSQNVWTWTNWN
                     LYHPFYNKWSSNLTTGNNYRLIKLTSTVTQEMYQHSKGFELQVRIDGVKTGKFHVRAL
                     MVSTGDIFPDYWTPSLEDFTTVTAFHEVQDTVSSHTRTIGDHTNQISQVIQTATGIVT
                     RVGNLETSRATTATVNAIQTQVSTLAGVWSVRNLTSAGTVLSQLNLNKDGTVKIDGKL
                     VQITGTTYIQDGVIASGKIASLDAGKITSGIISAARIGAEAITADKLKVDQAFFTKFM
                     ATEAYLKQLFAKSAFITQVQSVTLSANKISGGILSAINGAMKINLSLGNIKFFTNSPS
                     ISREVSGYPHQWVSFETGTSNGKPCGVTIIGSNRWNNWNANDGGFVGIRAWNGTDTDQ
                     IDVVGDKVRLASAPYTNPDGWEIVTLPNRLSIDAFKASDRPSSILNIGDIRIYRNGTT
                     YVSLKDVLHQFNHNFKHLVNITGRGDVILTWDTIK"
BASE COUNT         1418 a         1020 c          816 g         1562 t
ORIGIN      
        1 caagtaattg ctctattttt caatcagaaa tagtaggaga gaaatctatt ttttatagca
       61 atcaaagaat tgattgaaga aattagccta aactagactt ttcttcaatc aatattaatt
      121 caaatcttta gtcaatattc taaacaaaat gttggatatg taaaattaca caatcgttcc
      181 aaattttgct ccattttgta cacgccacgc aacatagcga cgttcgccag aatatgaaac
      241 atagcttagc caaatatgac catcattgac tacataggag tcataactaa aggattctcc
      301 tgagttgtat tgtcctacta ctccaccact acgactagga tgattacgaa tcgttactgt
      361 ctgatttgga tagaatctac ctgtttctgg aacccgagta aattgagtcg agttttgtga
      421 accagacgtt gaatttggtt cgtcaatcgt tccaaatttc gttccatttt gtacacgcca
      481 cgcaacatag cgacgttcgc cagaatatga aacatagctt agccaaatat gaccatcatt
      541 gactacataa gagtcataac taaaggattc tcctgagttg tattgtccga ctactccacc
      601 actacgacta ggatgattac gaatcgttac tgtctgattt ggatagaatc tacctgtttc
      661 tggaacccga gtaaattgag tcgagttttg tgaaccagac gttgaatttg gttcatcaat
      721 cgttccaaat ttcgttccat tttgtacacg ccacgcaaca tagcgacgtt cgccagaata
      781 tgaaacatag cttagccaaa tatgaccatc attgactaca taggagtcat aactaaagga
      841 ttctcctgag ttgtatcgtc ctactactcc accactacga ctaggatgat tacgaatcgt
      901 tactgtctga tttggataga atctacctgt ttctgaaatc cgagtaaaag gtatgcttgg
      961 agctgttgat gagtcagtat aatttcccaa tgcataatcc acactactat caatcagttc
     1021 tagttttcca ttattttgtc gcttaatcgc ttcatatgta ggtaataata atgatttata
     1081 atgttcaaag ccactcccag cataatcgct cttagctcct cctatcctga ataacccttt
     1141 gcaaaaatca tcaatgttgt taacatttga gactttatac aacccattct catttgacaa
     1201 tatatatgta taagccttga agtaatcttc cattgagtta aaatggacat aatatccgcc
     1261 ttccgaggtt ggtcttgctg ttcctcttcg catagaaatt cctaaatgtg ttggtgcatg
     1321 aaacggttca gaaattccac tccagttatt atcgacttgc cccactgacg atacattagg
     1381 gttgccccag tgactttcaa taaacatctg ggctaataaa aaactaggtt ttaatgaata
     1441 tttttgagaa tacttaataa gtaatcgaat attttcttga gaaatcatat tcccagcatt
     1501 caccaatgaa ccaccagaat attctgcaga acttgaaata tatctcggaa aagcatatcc
     1561 tctaattctt ccatctccaa taacatagct tcttcgagcg accgcattac tagaattccc
     1621 ctcaattgtg tgtacgtaat ttccttcaac cttttcaaca atgccaatat ggtctgcaaa
     1681 gccatcatta ggttgagtag ttttactcca atgaaaagtt atgatcgcac ctggttttgg
     1741 cacaatatta ccatcttcat tccaaatacc taattgttta aaaattgaaa tatgtctatc
     1801 aactccacat tctctaccga taatgtctat cgcattggtt tttattgcta gaaaagaaat
     1861 aaatgcatca caccaatcat catgatactt aacagcatac ccttgaggaa gtggagatac
     1921 agaattgtac gtatcaataa acattttatg tgtagttgtt ccgccagata cacctatata
     1981 ctttttagcc tctactaaaa ttttattcgc tgttgttgcc ataatgttct atcctttatc
     2041 tttctttatt ttttatttgt atgcttactt atgttagaaa ccatttaatg agttggactt
     2101 ctcatattaa tcatctcgat tacctcctta cttactaagt acagtttgag aggatttagt
     2161 tcaaaaaatc tgaattattt atcctcctat cttactaggt agactttaga gaagattttc
     2221 cgcatttatt gaaaaaaaaa agcaaaaaat aaagcttgat gtttccacca gacttataac
     2281 ttaataatga aattctaaac ccacctacaa ctttggcatt cactgctcca ggatcatagc
     2341 ttattcgccc ttgtccatga ccacaaatga ctagatgttt tccaaaatct tctcacctct
     2401 cgttgatttg ttttaagatt gcttgtagtt tctcaggtat tggtagaccg attcgaacgg
     2461 tattttctaa gatactcaac ccctcattac tgagataaaa gaaaatgacc atggttcgaa
     2521 ttgttccacc ctgcttgatg attgcagtat caatcatatg acctagtgaa actaaaaata
     2581 aaatggctat ctttttaaag atgccacgaa aaccgatact gcttgacaat tgtttctcta
     2641 caactgccac aaaaattcct gttagatagt caataataat gaagacaagt agggcatata
     2701 agataccatc caactctcca aatagactac caatcaagcc cccaatcatg gaaaataaaa
     2761 tcttattaat agttaacagt tccttcatcg gtcacctcac tttctactga accttcctcc
     2821 acaatgatag ggtctgacca atccggttga ccgttctcat caaatcgcat cagatagaaa
     2881 caatcatgga acagatcaga aaggttcagt gttaatgtgg tactgcccca ctgattaaat
     2941 gcccaaactg tttcagttgt aatcaactgc cgtttcccat ttttaatggc aggtcgcctt
     3001 acttcttcaa gatacatgta aaaatcctgc tcagctgtct tacatcggat gaactcgcca
     3061 ttcttacgca tgtaggcaag agctgtctcc aaatcaaatg gttctgttac tttgtcaata
     3121 ttgagtagtg ccataatcgc tattctcctt tcccttcttc aggttttgtc tgaacttcta
     3181 acaactcagt caattcctgt ttttctttcc gcaattgact aagttcctca tccctctcca
     3241 ccaattggat ggcgatgagg ttcttagcgg taatttcatc agagagcttt gtgacaagct
     3301 cctgaatagt tagttttaat gattggttga tttgttctag attcatctgt gaactccttt
     3361 atttaatcgt atcccatgtc aagatgacat cacctcgacc tgtgatgttt actaagtgtt
     3421 taaaattgtg gttgaattga tgaagaacat ctttcaaact gacgtaggtt gtaccgtttc
     3481 gatagatgcg aatatctccg atattcaaaa ttgaacttgg tcggtcagat gctttaaagg
     3541 catcaatact cagtcggtta ggcaacgtta ctatttccca tccatctgga ttggtatatg
     3601 gagcactggc caaacgaacc ttatcaccta ccacatcaat ttggtcggta tctgtaccgt
     3661 tccatgctcg aattcctaca aaaccaccgt cattggcatt ccagttgttc catctattgg
     3721 aaccgataat ggttacacca catggcttac catttgatgt tcctgtttca aatgaaaccc
     3781 attggtgggg atatccacta acctcacgag aaatggatgg agagtttgta aagaacttga
     3841 tgtttccaag tgacagattg attttcatgg ctccgttgat tgctgacaag attccaccag
     3901 aaattttgtt ggcagatagg gttactgact gcacttgggt tataaaggct gatttggcaa
     3961 acaactgctt gaggtaggct tctgtagcca taaacttggt aaagaatgct tggtcaacct
     4021 ttaacttatc cgcagtgatt gcttctgctc caattcgagc tgctgatata atgcctgacg
     4081 taatctttcc tgcatcaaga ctggcaatct ttccgctagc aatcacacca tcttggatat
     4141 aggttgtacc tgttatttga acgagttttc catcaatctt gacagtgcca tccttattga
     4201 gattgagctg actgagaact gtccctgcac tggtcaaatt tcgaaccgac cacaccccag
     4261 caagtgttga aacctgcgtt tgaattgcat ttactgtcgc cgttgtagct cgacttgttt
     4321 ctagattgcc aactcgtgtc acaatcccag tagccgtttg aataacctga ctgatttgat
     4381 tggtgtgatc tccaattgtc cgagtgtgac tacttacagt atcctgcact tcatgaaaag
     4441 ctgtcactgt cgtaaagtct tctaacgatg gtgtccaata gtctggaaag atatcaccag
     4501 ttgataccat taaagctctc acatggaact taccagtttt aactccatcg attctaactt
     4561 gaagttcaaa tcctttagag tgttggtaca tctcttgagt gacggtagag gttagtttga
     4621 ttaaccgata attgttaccc gttgtcagat tgctactcca tttattatag aaagggtgat
     4681 acaaattcca gttggtccat gtccaaacat tttgactatc caagattgga ccttgaagtt
     4741 tcatagtgcg agtcgttaca gcagggtcaa aggtaatctc atccgctgag atatgaacat
     4801 atagatgaac ttttga
//
LOCUS       DBNFCX010000126         4744 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.126, whole genome shotgun sequence.
ACCESSION   DBNFCX010000126 DBNFCX010000000
VERSION     DBNFCX010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 4744)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4744)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4744
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.126"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..431)
                     /locus_tag="AC1PJC_002054"
     CDS             complement(<1..431)
                     /locus_tag="AC1PJC_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1273 domain-containing protein"
                     /protein_id="HIP6621025.1"
                     /translation="MDTKSLLVTGYRHTDLGIFSEKDPRLHIIKSAIRRNFIRFLEEG
                     VSWFILTGQLGFEYWSLEVLEDLRAEGYQLSIATIFPFENHGEQWNEANQAKLARFKQ
                     VDFVKYAYPRYENPGQFRDYNQFLLDNTTGCYLFYDSENET"
     gene            497..1114
                     /gene="recU"
                     /locus_tag="AC1PJC_002055"
     CDS             497..1114
                     /gene="recU"
                     /locus_tag="AC1PJC_002055"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RecU"
                     /protein_id="HIP6621026.1"
                     /translation="MVNYPHKVSKKINRTSPISSQRVNFANRGMSFEAAINDSNQYYL
                     AHDIAVIHKKPTPVQIVKVDYPKRSRAKIVEAYFRQASTTDYSGVFKRHYIDFEAKET
                     RQKASMPMKNFHAHQIEHMKQVVKQGGICFVLLHFSTLKETYLLPATHLIEFYQVDMG
                     SKSMPLTFIRQYGFEIQMGRFPSIPYLEIVEKNLLGGESFENYNN"
     gene            1095..3269
                     /gene="pbp1a"
                     /locus_tag="AC1PJC_002056"
     CDS             1095..3269
                     /gene="pbp1a"
                     /locus_tag="AC1PJC_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein PBP1A"
                     /protein_id="HIP6621027.1"
                     /translation="MKTTTIKKALLITANILLAGAIIACLAGAALVVYYIQSAPELTE
                     ESLTATVSSKIYDKNGNLIADLGAEKRSSAKTEEIPTDLVNAIVAIEDQRFFNHRGVD
                     VIRIAGSLINNLSGGRLQGGSTLDQQFIKLTYFSTSVEDQNLKRKIQEAWLATQLERR
                     NTKQEILTYYINKVYMSNGNYGMKTAALAFYGKELKDLTLPQLALLAGMPQAPNQYDP
                     YTNPEDAKARRDLVLAEMLEEKYIDNTQYEQAVLTPVTDGLQPLSTAAAYPAYMDNYL
                     KQVVEEVEAKTGYNLLTTGMDVYTNVDPAAQQQLWNIYNTDMYVSYPDDLLQVASTVV
                     DVSNGKVVAQLGGRKQETNVSFGTNQAVETNRDFGSTMKPITDYAPAFENGIYTSTAD
                     LILDGPYNYPGTTTPVNNWDKQYYGNISVKTAIQYSRNVTAIKALETTGLENALKFLN
                     SVGIDYPDIHYSNAISSNTSDTGSQYGASSEKMAAAYAAFANGGTYYAPQYVNKIVFS
                     DGTVTEYAPQGTQVMSAETAYMMTDMMKAVMSYGYGLNASVSGVPMAGKTGTSNYTDS
                     ETDTILASIPEANYSYMVVPDENFVGYSSQYAMAVWTGYTNRMTPILDNSMRIATDVY
                     HNMMLFMHSDYTATDWEMPSGLVRYGSNYYLRGSRSLSNAYNTYTSYSTSSSSSTETS
                     ETAEATTTSSETSSGTSTETATSSTETATTGNNPATGQTDGQ"
     gene            3328..4041
                     /gene="rsmG"
                     /locus_tag="AC1PJC_002057"
     CDS             3328..4041
                     /gene="rsmG"
                     /locus_tag="AC1PJC_002057"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004260112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA];
                     GO_process: GO:0046118 - 7-methylguanosine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HIP6621028.1"
                     /translation="MKPEVFYKTLADQGIQLSDQQKHQFHRYFQLLVEWNEKINLTAI
                     TEESEVYLKHFYDSIAPILQGHIQNEPLRLLDIGAGAGFPSLPMKIIFPQLDVTIIDS
                     LNKRINFLHLLAQELELEGVHFYHGRAEDFAQDKNFRAQFDLVTARAVARMQILSELT
                     IPYLKLNGKLIALKASSAEDELTQAKNALNLLFAKVIENHDYTLPNGDPRTLTIVEKK
                     KETPNKFPRKAGMPNKRPL"
     gene            complement(4454..>4744)
                     /locus_tag="AC1PJC_002058"
     CDS             complement(4454..>4744)
                     /locus_tag="AC1PJC_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HIP6621029.1"
                     /translation="CPDNNESAGKKRSTKIRHGNSYLKKCLCQAAFAIKKQKGSPLAD
                     RFYQIQSRRGSQKATIALAHQLLKIAYILLKEQITYPEFLAQKKTTRDELVA"
BASE COUNT         1479 a         1002 c          902 g         1361 t
ORIGIN      
        1 ttggtttcat tttcagaatc gtaaaacaaa taacaacctg tcgtattatc cagtaaaaac
       61 tggttatagt ctctaaactg ccctgggttt tcatagcgtg gataggcata ctttacaaaa
      121 tcaacctgct taaaccgtgc taactttgct tggttagcct cattccactg ttcgccatga
      181 ttttcaaatg gaaatattgt tgcaatactc agttgatatc cctcggctcg taaatcttct
      241 aagacttcta aggaccagta ttcaaaaccc aattgacctg tcagtataaa ccaactaaca
      301 ccctcttcta aaaaacgaat aaaattccta cgaattgcag atttaataat gtgcagtcga
      361 ggatcttttt ctgaaaaaat tcccaggtct gtatgtctat aacctgttac caaaaggctc
      421 ttagtatcca tttcttgtac tcttttcgct aattatggta taatatgctg atattatttt
      481 atcaagaagg agttctatgg tcaattatcc tcataaggtg tcaaaaaaaa tcaatagaac
      541 cagtcctatt tcatcccagc gagtaaactt tgctaatcgc ggaatgtctt ttgaggccgc
      601 tatcaacgat agcaatcaat attaccttgc gcacgatatt gctgtcattc acaagaagcc
      661 aactcccgtg caaattgtaa aagttgatta ccccaaacgg agccgtgcta agattgtcga
      721 agcatacttt cgacaggcat ctaccacaga ctactctggt gtttttaaaa gacattatat
      781 tgattttgaa gcgaaagaga cacgccaaaa agcatccatg cccatgaaaa attttcatgc
      841 gcatcagatt gaacacatga aacaggttgt taaacaaggt ggtatttgtt ttgtccttct
      901 tcacttttca acattaaaag aaacctatct cttgccagcc actcatttga tcgaatttta
      961 tcaagtagac atgggtagta agtcgatgcc tctaaccttt attcgacaat acggctttga
     1021 gattcaaatg gggcgtttcc ccagcatccc atatctggaa atcgttgaaa aaaatctatt
     1081 aggtggtgaa tcttttgaaa actacaacaa ttaaaaaagc tcttctaatc actgcaaata
     1141 ttttacttgc gggggctatc attgcctgcc tggccggagc tgcattggtt gtttactaca
     1201 tccaaagcgc tccagaattg acagaagaat ctttgacagc aactgtgtca agtaaaattt
     1261 acgataagaa cggaaatctt attgcagatt taggagcaga aaaacgttcg agtgccaaga
     1321 ctgaagaaat tccaacagac ttggtaaatg cgattgtcgc aatcgaagac caacgtttct
     1381 tcaatcatag aggagttgac gtgattcgta ttgcaggttc cctgattaat aacttgagcg
     1441 gaggacgttt gcaaggtggc tcgacacttg accaacagtt tatcaagctg acttatttct
     1501 cgacatccgt agaagatcaa aatttaaaaa ggaaaattca agaggcttgg ctggctactc
     1561 aattggaacg ccgcaatacc aaacaagaga ttttgaccta ctacatcaac aaggtgtata
     1621 tgtcaaatgg taattacggt atgaagactg ctgctcttgc tttttatgga aaagagttaa
     1681 aagatttgac tcttcctcaa ttagctcttt tagcaggaat gccccaagcg ccaaaccaat
     1741 atgatcctta taccaatcca gaagatgcaa aagcacgtcg cgatttggta ttggctgaga
     1801 tgctggaaga aaagtacatt gataataccc agtatgaaca agctgttcta acacctgtaa
     1861 cagatggttt acaaccacta tctactgcag ctgcttatcc tgcttatatg gacaactatc
     1921 tgaaacaagt cgttgaagaa gttgaagcaa aaacaggtta caacttgctg acaacaggga
     1981 tggatgtcta tacgaacgtc gatcctgccg cccagcagca actttggaat atctacaata
     2041 cagatatgta tgtcagctat ccagatgatt tattacaggt agcttcaacg gttgtggatg
     2101 tttctaatgg taaagtcgtt gcgcaattag gtggtcgtaa acaggaaaca aacgtctcat
     2161 ttggtaccaa ccaagccgtt gaaaccaacc gtgacttcgg ttctacaatg aagccaatca
     2221 cagactatgc tcctgctttt gaaaatggca tttatacatc tacagcagat ttaatattag
     2281 acggtcctta taactatcct ggtacaacaa ctcctgtcaa taactgggat aaacaatact
     2341 atggtaatat ctctgttaag actgctattc agtattctcg aaatgttaca gccattaaag
     2401 cattggaaac tacaggttta gaaaatgcct tgaaattttt gaatagcgtt ggtatcgatt
     2461 accctgatat tcattactct aatgctattt caagtaatac atccgacact ggtagccagt
     2521 atggggcaag tagtgaaaag atggctgctg cctacgccgc ttttgccaat ggcggcacat
     2581 actacgctcc gcagtatgtc aataaaattg tctttagtga tggaacagta acagaatacg
     2641 ctcctcaagg tactcaagtc atgtctgccg aaacagccta catgatgacc gatatgatga
     2701 aggctgttat gtcttacggt tatggattaa acgcttctgt tagtggagtt cctatggcag
     2761 gtaaaacagg tacatcaaac tataccgata gcgaaacgga tactattcta gcttcaattc
     2821 cagaagcaaa ttatagctac atggtcgttc ctgatgaaaa cttcgttgga tattctagtc
     2881 agtacgcaat ggctgtttgg accggatata ccaatcgtat gactcctatc cttgataaca
     2941 gcatgcgaat tgcaacagat gtctaccaca atatgatgct ctttatgcat tcggactata
     3001 cagctaccga ttgggagatg ccaagcgggc tcgtacgtta cggttccaac tactatctca
     3061 gaggtagtcg ctcactatcc aatgcttata acacgtacac tagctatagt acaagttctt
     3121 ctagttcgac tgaaactagt gaaacggccg aagcgacgac aacatcaagc gaaacatcat
     3181 ctggaacttc caccgagact gcaacttctt caactgaaac tgcaacaaca ggaaacaatc
     3241 ctgcgacggg acagacagat ggtcaataag aaaattccca gactcttctg ggtttttctt
     3301 ttgcttaaat tatgataaga taagattatg aaacctgaag tattttataa aaccttggca
     3361 gaccaaggca ttcaattaag cgaccaacaa aaacaccaat ttcatcgcta tttccaacta
     3421 ttagtggaat ggaatgaaaa aatcaatctg acagctatta ccgaggaaag cgaagtctat
     3481 ctgaagcatt tctacgattc tatcgctcca atcttgcaag gccatattca gaacgaacct
     3541 cttcggcttt tagatattgg agctggagct ggatttccta gcctacctat gaagattatc
     3601 tttccgcaac tagatgttac catcattgat tctctgaata aacgaattaa ctttttacat
     3661 ttgcttgccc aagaactaga gctcgaaggt gttcatttct atcatggtcg tgcagaagac
     3721 tttgcacaag ataagaactt ccgtgcacaa tttgaccttg tcacagcacg cgcagttgcc
     3781 cgcatgcaga ttctttctga attgactatt ccttatttga agctcaacgg aaaattaatc
     3841 gcactcaagg cgtccagcgc agaagatgaa ttgacccagg caaaaaacgc actcaatctc
     3901 ctcttcgcaa aagtcatcga aaaccacgac tatactcttc caaatggcga ccctcgaaca
     3961 ttgactatcg tcgaaaagaa aaaggaaact ccaaataagt ttccacgcaa agctggtatg
     4021 ccaaataaaa gaccccttta aacataagaa aagcgaggct gggcaaaaag ctcaacctcg
     4081 cttctcagag ttcgtgtcaa catctcagcg cagtggttga ttggttttaa cagtccagtg
     4141 gactgttaaa ggttggagat aagatttgcg aagcaaatct cagcaattcg tgttttacac
     4201 tccaaatctg gccattacga ctgatgcgaa cagagttcgc ttcatttcca acctccaaca
     4261 gtcactactc tgactgttgg agctatgcgg gggtgggagt gaaacagtct ggggatagac
     4321 tgtttcagct caacaactta aaacgaaaaa ttgttgacga actctttttg accagtcgag
     4381 ttcttatacg aaaactcaaa agaatgcaaa aactccctcc ctatgatata atcaaagcga
     4441 aaaatttttt atgttaggct actagctcgt ccctagtagt ctttttctgt gctaaaaatt
     4501 caggatacgt tatctgctct tttaagagga tataagctat ttttaataat tgatgtgcga
     4561 gtgcaattgt tgctttttgt gaaccacgcc gactttgaat ctgataaaat cggtctgcta
     4621 ggggactacc tttttgtttt ttgatagcga aagcggcttg gcataaacat ttcttcaaat
     4681 atgaatttcc gtgtcgaatc ttggtacttc gttttttacc agcactctca ttattatctg
     4741 gaca
//
LOCUS       DBNFCX010000127         4515 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.127, whole genome shotgun sequence.
ACCESSION   DBNFCX010000127 DBNFCX010000000
VERSION     DBNFCX010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 4515)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4515)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4515
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.127"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..382)
                     /locus_tag="AC1PJC_002059"
     CDS             complement(<1..382)
                     /locus_tag="AC1PJC_002059"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="AlwI family type II restriction endonuclease"
                     /protein_id="HIP6621030.1"
                     /translation="MKLDSPNSIFNMGDTSIRVKQLVEVNKLILKHISEYMSGGFVWE
                     RNTILQEDFYKSFIDEIARLEMEEGVELFSDFKRAKNYTVNTKRLGLRGRTLTNALMK
                     TGLISSERKVSAVGKAYLENKLKKN"
     gene            complement(687..986)
                     /locus_tag="AC1PJC_002060"
     CDS             complement(687..986)
                     /locus_tag="AC1PJC_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017649884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5960 family protein"
                     /protein_id="HIP6621031.1"
                     /translation="MNRKELYKDKLQMDYFSESYIKFEEDFYRYSADGTPLTFIIDDI
                     LLSMALSHRNYFKLNKEKSVDGRDHYFQFQVTLESDNKNVRTFRYIGQGANLKVG"
     gene            complement(979..1344)
                     /locus_tag="AC1PJC_002061"
     CDS             complement(979..1344)
                     /locus_tag="AC1PJC_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000567224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621032.1"
                     /translation="MIDRSYFPFQSAREHQDRGMMKWMGFFLSEHTTSLDEEKHKTIF
                     SDELSMLDKLTLISQLYVGQLSGQFIVKEGNQKSTYQGRVTEIAKDEIVVKSADKFHL
                     VEVKNILAIYLVEGEAEDE"
     gene            complement(1344..2759)
                     /locus_tag="AC1PJC_002062"
     CDS             complement(1344..2759)
                     /locus_tag="AC1PJC_002062"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000540291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Y-family DNA polymerase"
                     /protein_id="HIP6621033.1"
                     /translation="MGYFDYSREPQSDIAFIDMKSFYASVECVERGLHPLKTSLCVMS
                     RADNSNGLILASSPMFKKVFGKQNVGRVYDLPFDIHTRKFSYYNAKRQGIEMTPEYVK
                     FIEEWAKVTFIVPPRMSLYIEKNLEIQRILQNYGSPEDILPYSIDEGFIDLTGSLNYF
                     VSDKNLSRIAKLDVVSSKIQHDIFRQTGVYSTVGMSNSNPLLAKLALDNEAKKTKTMR
                     ANWSYEDVETKVWGIQEMTNFWGIGSRMKKRLNALGIMSIKELANSNPDVLKAHLGVN
                     GVDLFFHANGIDESNVHKPYKPKSNGIGNSQVLPRDYVRQREIEIVLSEMAEQVAVRL
                     RKVGKKTTCVSIGVGYSRSEGKKSIHAQMKVEPTNQTETLKNHVLALFHKKYSSGAVR
                     SISVYYSQLVDESFGLISLFDDVEQIEKEERLQSAIDTIRHQFGFTSLLKANALSEGS
                     RVIARSKLVGGHSAGGLDGLS"
     gene            complement(2764..3450)
                     /locus_tag="AC1PJC_002063"
     CDS             complement(2764..3450)
                     /locus_tag="AC1PJC_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018369035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIP6621034.1"
                     /translation="MFSPEALKKRRTELKISQADMARQLDITRQSYFTWESGKTKPNS
                     QNIEKLADILGVSTSYFESEYKIVETYLRLNAINREKVEDYAEELLTIQEENKIVQLY
                     SIKVIDDIELSAGLGESIYDEADTVEVLSDTDYQYDIATWIKGDSMEPVYVNGEVALI
                     REGGFDYDGAVYAVVWNERAYIKKVYLEEDGYRLVSLNPDYSDMFASAEDNPRIVGKI
                     IGHFMPVVGG"
     gene            complement(3461..4318)
                     /locus_tag="AC1PJC_002064"
     CDS             complement(3461..4318)
                     /locus_tag="AC1PJC_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000432053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ImmA/IrrE family metallo-endopeptidase"
                     /protein_id="HIP6621035.1"
                     /translation="MKNTFSKISSVVKSQLYPFIKLRELSLLSYTFEDFFDHVIKENN
                     IKVLGHHFSNRQIEGLTLIDSGGLISLSFERENPVVRQNFTKCHELGHFLLGHHGTVF
                     TELKDSQTTAEEVEANYFSACLLMPDIVLLSKIYYQKSGFQEVANSLCVSYEALSIRL
                     MDLLVYLLSEDKKNIYQAIESYMMKDNREILELFGMVHDTIVTEYNAYEPDPKDKLFY
                     LLDQNDFITNVELSELAQTEFRSSISSNKIGTWAYYDKGKAIFYAWNKEKLTNKEAYL
                     KAKSKHYLS"
BASE COUNT         1362 a          939 c          716 g         1498 t
ORIGIN      
        1 catttttctt taacttattt tccaagtaag cttttccgac tgcactaact tttcgttcag
       61 aggaaatcag tcctgttttc attagtgcat tagtcagagt tcttcctctt aaaccaagtc
      121 ttttagtatt tacagtataa tttttggctc tcttaaaatc actaaataac tctacacctt
      181 cttccatttc aagccttgca atttcatcta taaaagactt ataaaaatct tcttgtagta
      241 tagtatttcg ttcccataca aaaccaccac tcatatattc ggatatatgc tttaaaatta
      301 gcttatttac ttctactagt tgtttcacac gtatagaagt atcccccata ttaaaaatac
      361 tatttggact atctaacttc ataacaatac ctccatttct tactattatc attataccgt
      421 ttcaattccg tgtttccaat taaaatcata aatttttcaa cacaatcata attatctctt
      481 tttctttccg aaaaatggtt cttttcagga aagaaataac aaaggctatt aaaacgaact
      541 ttatacgaat agtctattat aatggaagct acataataaa aaaaaagaaa cagccaatgc
      601 gtaatacatt gactgcctct aggagtttat gaaaaagaaa aaatttagga ttgattatag
      661 tatataggtg cgaccttaaa tccttcttaa ccgactttca aatttgctcc ttgaccaata
      721 tatctaaaag tcctgacgtt cttattatca gactccaaag ttacctgaaa ctggaaatag
      781 tggtctcgtc catcgactga cttttccttg ttgagtttga aatagttcct atgagataac
      841 gccatagaaa gtagaatatc atcaatgata aaggtcaacg gtgttccatc tgctgagtaa
      901 cggtaaaaat cttcttcaaa cttgatatag ctttctgaga aataatccat ctgcaactta
      961 tctttgtaaa gctctttcct attcatcttc tgcttctcct tccactaagt aaatagctaa
     1021 aatattttta acctcaacaa gatgaaactt atctgctgat ttgaccacga tttcatcttt
     1081 ggctatttca gtcacccgtc cttgataggt ggatttttga ttgccttctt tgacgataaa
     1141 ttgccctgat agttgcccta catagagttg tgaaataagg gttagcttat ccaacatact
     1201 aagctcatca gaaaaaattg tcttatgctt ttcctcatct agtgacgtgg tgtgctccga
     1261 taagaaaaag cccatccatt tcatcatacc acggtcttga tgttccctag cggattgaaa
     1321 aggaaaataa cttctatcta tcattagctt aacccatcca atccacctgc tgaatgtcca
     1381 ccgactaact tacttctggc aataacccgt gagccttctg ataaggcatt tgccttcaaa
     1441 agtgaggtga agccaaactg atgtctgatg gtatcaatgg ctgattggag cctttcttct
     1501 ttttcgattt gttccacatc atcaaaaagg gatattagtc cgaatgattc atctactaac
     1561 tgagaataat agacgctgat acttctaacc gccccagaac tatacttctt atgaaataaa
     1621 gctagcacat gattcttcaa ggtctctgtt tgattcgttg gttcaacctt catctgagca
     1681 tgaatacttt tctttccttc acttcgagaa taacctacgc caatagagac acaagtcgtc
     1741 ttcttgccta cttttctgag acggacggct acctgctctg ccatttccga aaggactatc
     1801 tcaatctccc tttgtctaac atagtccctt ggtaatacct gagaattgcc tataccatta
     1861 gattttggtt tataaggttt atggacgtta ctttcgtcaa taccattggc atgaaagaac
     1921 aggtcaacac cattgactcc taaatgagcc ttgaggacat cagggttact attggctagt
     1981 tctttgatag acataatgcc cagagcattg agacgttttt tcatacgact gccaattccc
     2041 caaaagtttg tcatttcctg aataccccag accttagttt ctacgtcttc ataagaccaa
     2101 ttggcacgca tggttttagt cttcttggct tcattatcca acgccagctt agccaaaagt
     2161 gggttactgt tggacatgcc taccgttgaa taaactcctg tctgtcggaa aatatcatgc
     2221 tgaatcttac tggaaaccac gtcaagtttt gctattctgg acaagttttt atcagagaca
     2281 aagtagttta atgagcctgt caggtcaata aatccctcat caatggaata agggagaata
     2341 tcttctggac tgccataatt ttgtagaata cgttggattt ctaggttctt ttcaatatat
     2401 aagctcattc ttggtgggac aataaaggtc acttttgccc attcttcaat gaatttgaca
     2461 tattcaggtg tcatttcaat cccttgacgt ttggcattat agtaagaaaa ctttctggta
     2521 tgaatgtcaa agggtaagtc ataaaccctt ccaacattct gcttaccaaa gacctttttg
     2581 aacataggtg acgaggcaag aattaagccg tttgaattat ccgctctgct catgacgcaa
     2641 agagacgttt ttaaggggtg aagacctctc tcaacacact caacgctggc atagaaggac
     2701 ttcatatcaa taaaggcaat atcactttga ggctctcttg aataatcaaa atagcccata
     2761 accttatcct cccactactg gcataaagtg accaataatt tttccaacta ttcttggatt
     2821 atcttctgcg gaggcaaaca tatctgagta atcaggattg agtgagacta ggcggtagcc
     2881 atcttcttct agataaacct ttttgatata agctctttca ttccaaacca cagcgtaaac
     2941 tgcaccgtca tagtcaaagc caccctcacg gataagagca acttctccat tcacatagac
     3001 aggctccata gagtcccctt taatccacgt agcaatatca tactgatagt ctgtatctga
     3061 caaaacttcc acagtgtcag cttcatcata gatactttcc cctagaccag cagaaagttc
     3121 aatatcatca atgaccttaa tactgtacag ttgaacgatt ttattttctt cttgaatagt
     3181 aagcaattct tccgcatagt cctcaacctt ttcacgattg atagcattga gtcgcaaata
     3241 ggtctctact atcttatatt ctgattcaaa gtaacttgta gatacgccaa gaatatctgc
     3301 tagtttttcg atgttctgac tgtttggttt agtctttcca ctttcccaag tgaaatagga
     3361 ttgacgggta atatcaagct gtctagccat atcagcttga ctgattttta attccgtacg
     3421 tctctttttc agtgcttctg gtgaaaacat attagtctcc ctaacttaaa tagtgtttgc
     3481 tttttgcttt gagataagct tctttgtttg tcaatttctc tttattccaa gcataaaaga
     3541 ttgcctttcc tttatcataa tatgcccaag taccaatttt attagaagaa atagaactcc
     3601 tgaactctgt ctgagccaat tctgacagct ctacatttgt tatgaaatca ttttggtcta
     3661 gtagatagaa tagcttatct tttgggtctg gctcgtaggc attatattca gtaactattg
     3721 tatcgtgaac cataccaaat agttctagaa tttcacgatt atctttcatc atgtatgact
     3781 caatagcttg ataaatattt ttcttatctt cactaagcaa gtagacaagc aagtccatca
     3841 ggcgaatact caatgcttca taagacacac aaagagaatt agccacctct tgaaaaccag
     3901 acttctgata ataaatcttg gacagcaaaa caatatctgg catgagcagg catgctgaaa
     3961 aatagttggc ttctacttcc tctgccgtgg tctgactatc ttttaactca gtgaagactg
     4021 taccgtgatg accaagtaag aaatgaccca gctcatgaca cttggtgaaa ttctgacgaa
     4081 caactggatt ttctctttca aaagaaagtg aaatcagccc tcctgaatct atcaaggtca
     4141 aaccctctat ttgacgattt gaaaagtgat gtcctagtac cttgatgtta ttctctttga
     4201 taacatggtc aaagaaatcc tcaaaagtat aggacaagag ggacaattcc cttaatttga
     4261 taaagggata gagctgggat ttaacaactg aactaatctt tgaaaaggtg tttttcaaat
     4321 gcttcacccc ctttgtcagt tttaaaactg actctatttt acaaaaaaag tggacaaatg
     4381 tccactagtt tgtagtcctt attaactctt taaaattctt aatatgcaca tttaaaattt
     4441 caattgcatt tgaatgttcc tttttcaaag tttcaatcat cgaattagag gtgtttaata
     4501 tatggagtga atcat
//
LOCUS       DBNFCX010000128         4510 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.128, whole genome shotgun sequence.
ACCESSION   DBNFCX010000128 DBNFCX010000000
VERSION     DBNFCX010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 4510)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4510)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4510
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.128"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(107..1918)
                     /gene="glmS"
                     /locus_tag="AC1PJC_002065"
     CDS             complement(107..1918)
                     /gene="glmS"
                     /locus_tag="AC1PJC_002065"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014621492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:1901137 - carbohydrate derivative
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HIP6621036.1"
                     /translation="MCGIVGVVGNTNATDILIQGLEKLEYRGYDSAGIFVTGGEQAHL
                     VKAVGRIAELSAKVGDKTEGTTGIGHTRWATHGKPTENNAHPHTSQTAGHILVHNGVI
                     ENYAEIKEEYLAGHDLKGQTDTEIAVHLIGQFAEEGLSTLEAFKKALKIIQGSYAFAL
                     IDATDADTIYVAKNKSPLLIGLGDGYNMVCSDAMAMIRETSEYMEIHDKELVIVKKDS
                     VEVMDYDGNAIERGSYTAELDLSDIGKGTYPYYMLKEIDEQPTVMRKLISAYTNEAGQ
                     VTVDADIIKAVQEADRIYILAAGTSYHAGFASKDFLEKLTDTPVELGISSEWGYNMPL
                     LSKKPLFVMISQSGETADSRQVLVKANEMGIPSLTVTNVPGSTLSREATYTMLLHAGP
                     EIAVASTKAYTAQIATLAILAKAVGDANGNAYAKEFDLVHELSIVAQSIEASLSEKDV
                     IAEKVEKLLSTTRNAFYIGRGSDYYVSMEASLKLKEISYIQCEGFAAGELKHGTISLI
                     EDGVPVLALISNHPHLASHTRGNIQEVVARGADVLTIVDEAVAKEEDDITVTTVHPFL
                     SAIAMVVPTQLIAYYATLQRGLDVDKPRNLAKSVTVE"
     gene            complement(2108..2650)
                     /gene="lepB"
                     /locus_tag="AC1PJC_002066"
     CDS             complement(2108..2650)
                     /gene="lepB"
                     /locus_tag="AC1PJC_002066"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HIP6621037.1"
                     /translation="MVKRDLIKQISLLVLLIFGIIGLRFWLLEPVTITPEMANSYLKE
                     NDFIMTVRNVRPIHGDFILYNHEGKEYVSRVIALENETVTYMDDVLYRNDIIVTENYL
                     KTPHSQESYTDDFTLETLTNGKYNVIPEGHYLVLNDVRTNQQDSRSFGLISSEAIVGR
                     LTFRISPLSEFGFIKTGLVQ"
     gene            complement(2693..3310)
                     /locus_tag="AC1PJC_002067"
     CDS             complement(2693..3310)
                     /locus_tag="AC1PJC_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HIP6621038.1"
                     /translation="MSDIMYPEVLTVGSGAVKVATVGDSLTYGYGLENREKDAYPCIL
                     AEKLGHHYQVSNYGLSGRSLQSTADFPYFKEKNAQLSLESEADIVIIMIGSNDSRGPY
                     WNRERFIREYREMAEQYMDLPSQPDVYLVIPPYVPTSRFGLNNQIIEDELQKIIPAIG
                     NELGLPVINLYTVTEGHLEYYSDGLHLTPLGNQVIAEEIYQHLRH"
     gene            3395..4504
                     /locus_tag="AC1PJC_002068"
     CDS             3395..4504
                     /locus_tag="AC1PJC_002068"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HIP6621039.1"
                     /translation="MKKQVIIIGGGIVGSTAAFYLSQEEQVNLTLIDSGVGTATRAAA
                     GIICPWMAQKKNKDWYKLTSDGAVFYRQLVADLEKSGATEIPFKQTGTIGLKSKPELL
                     DKIQKIAEERRVDTPTIGEITPLIGSEINQYLPLLKPDYFGIHLEGGGRIDGGRLIDI
                     LQEQFLKNGGTRIYGQAKLLDNHTVEVDNQVLTADHIILATGAWLPHILEPLGYQVDV
                     RPQKGQLFELDTEFDTDNWPVCMPYGEIDILPFENGKIIIGATHEDDMGYDLELDPEK
                     IQAMHDKIAEFMPDLANYPVARTRIGTRAYTSTYSPFYGNIEDMPNVWVASGLGSTGL
                     TNGPIIGWQIAKEILNQETNFDRTPYSPNRYILKK"
BASE COUNT         1371 a          993 c          796 g         1350 t
ORIGIN      
        1 aaagaatttt tcagaatttt taataaattt aacaaaattt gggaaaattt tgtatatttt
       61 ttcaatagta caaaaagaag gctggaaatc catgccttcc ttcttcttat tcaacagtaa
      121 cagacttagc caagttacgt ggtttatcaa catccaaacc gcgttgcaat gtcgcatagt
      181 aagcaatcaa ctgtgtcgga acgaccatag caatcgctga caagaatgga tgaactgttg
      241 taacagtaat gtcatcttct tccttagcta ctgcttcatc tacaattgtc aagacatcgg
      301 caccacgcgc cactacttcc tgaatattgc ctcgagtatg gcttgcaagg tgtggatgat
      361 ttgaaatcaa ggccaagact ggaacaccat cttcaatcaa tgaaatggta ccgtgtttca
      421 attcacctgc cgcaaagcct tcacattgga tgtatgaaat ttctttcaat ttcaagctgg
      481 cttccataga aacgtagtag tcactaccac gaccgatata gaatgcgttg cgagtggttg
      541 ataagagttt ttcaactttt tcagcaatca catctttttc tgacaagctg gcctcgatag
      601 attgagctac gatggacaat tcatgcacca agtcaaattc tttcgcgtag gcattgccat
      661 ttgcatcacc gacagcctta gccaagattg ccaaagtcgc aatctgtgca gtgtaggctt
      721 ttgtagaagc taccgcaatt tctggtcctg catggagcaa catggtgtaa gttgcctcac
      781 gtgatagggt cgaaccagga acgttggtta cagtcaaact tggaatgccc atttcattag
      841 ctttaaccaa tacctgacgg ctatcagcag tttcacctga ctggctaatc atgacaaaga
      901 gtggcttttt gctcaaaagt ggcatattgt agccccactc agatgaaatt cccaactcta
      961 ctggtgtatc tgtcaatttt tccaagaagt cttttgaggc aaatcctgcg tgataggaag
     1021 ttccagcagc caagatatag atgcggtcag cttcttgtac tgccttaata atatccgcgt
     1081 caactgttac ctgaccagct tcatttgtat aggcgctaat caatttacgc ataacagttg
     1141 gttgctcatc aatttccttg agcatgtagt atggataagt tcccttacca atatctgaca
     1201 aatcaagctc agctgtatag ctaccacgtt caatcgcatt gccatcatag tccatgactt
     1261 caacactatc ttttttcacg ataaccaatt ccttatcgtg aatttccatg tattcacttg
     1321 tctcacgaat catagccatg gcatctgagc agaccatgtt atagccatca ccaagaccaa
     1381 tcaaaagtgg agatttattt ttggcaacat agattgtatc tgcatccgta gcatcaatca
     1441 aagcaaaggc gtatgaacct tgaataatct tcaatgcttt tttaaaggct tctagagttg
     1501 acaaaccttc ttctgcaaat tgaccaatca agtgtacagc aatttctgta tctgtctgcc
     1561 ctttcaagtc atgacctgca agatactctt ccttgatttc tgcgtagttt tcaatcacac
     1621 cgttgtgaac taggatatgt ccagcagttt gagaagtgtg agggtgagcg ttattctcag
     1681 ttggcttacc atgagtcgcc caacgagtat gaccaatccc tgttgttcct tcagtcttat
     1741 cgccaacttt tgcagacaat tctgcaatgc gaccaacagc tttcacaaga tgagcttgct
     1801 caccacccgt cacaaaaata cctgctgaat cataaccacg gtattctaat ttttcaagac
     1861 cttgaatcaa aatatcagtt gcgtttgtat ttcctacaac accaacgatt ccacacatac
     1921 atatcaccta cgatgtttgt taacatcggc tttcatttct ttaaaaattg gtctagtcta
     1981 atttatatct aaaaagacca gtaaaatcag tatataacaa gtttttatcc ttgtcaacat
     2041 tttaattggt ctagtctaat ttcaaaatac agatccagtc atctcaacac aataaaaaaa
     2101 gctgattcta ctgaaccagc cctgtcttaa taaaaccaaa ttctgaaagt ggactaatcc
     2161 gaaaagtcag tctaccaaca atagcctcac tagaaatcaa accaaaacta cgactatcct
     2221 gttgattcgt tcgtacatca ttcaacacca aatagtgccc ctctggaatg acgttgtact
     2281 ttccatttgt caaggtttcc aatgtaaaat catctgtata actttcttgt gaatgaggcg
     2341 tttttaagta gttctctgta acaataatat cattacgata gagaacatcg tccatatagg
     2401 tgaccgtctc attttccaat gcaatcacac gactcacata ctcttttccc tcatggttat
     2461 acaaaataaa atctccatga atcgggcgga catttcgcac tgtcatgata aagtcatttt
     2521 ccttcaaata actatttgcc atctcagggg taatcgtgac tggctcaagt aaccaaaatc
     2581 gtaggccaat gattccaaaa atcaataaga ccaataaact gatttgtttt attaaatctc
     2641 tttttaccat aatctctcca tttcactagt attataccac aatttagagc cattagtgtc
     2701 tgagatgctg gtaaatctct tcagcaataa cttgatttcc tagcggtgtc aaatgaagac
     2761 catcgctata gtattcaaga tgtccctccg tcacagtgta aaggttaata actggtaaac
     2821 caagttcgtt tccgatagct gggataattt tttgtaattc atcttcaata atttgattat
     2881 tcaatccaaa acgactggtt ggtacgtaag gcgggatgac taaataaaca tccggctggc
     2941 ttggtaaatc catatactgc tctgccattt ccctatactc tcgaataaac ctctccctat
     3001 tccaatatgg tcctcggcta tcgttactac caatcatgat gatgacaata tctgcttcac
     3061 tctcaagtga aagttgggca ttcttctctt taaagtaagg aaaatctgca gttgactgaa
     3121 gtgaacgccc actcaatcca taatttgaaa cttgatagtg atgcccaagt ttctcagcta
     3181 gaatacaagg ataggcatct ttttcccgat tctccaagcc atatccataa gtcaaactat
     3241 ctccgactgt tgcaactttt acggccccac ttccaacggt taggacctca ggatacatta
     3301 tatctgacac acgaactcct taatttttct tattttctat tgtatcatgt tgaaaaaaat
     3361 aaataaactt ctgaatttgt gatataatta acttatgaaa aaacaagtta ttattatagg
     3421 tggaggaatt gttggctcta ctgcagcctt ttatctctcc caagaagaac aagtcaatct
     3481 tactctcatt gattcaggtg tcggaacagc cacacgagct gccgcaggta tcatctgccc
     3541 atggatggct cagaaaaaaa ataaagactg gtataagctg acttccgatg gtgctgtttt
     3601 ctaccgtcaa ttggtagccg atttggaaaa atcgggtgct actgaaattc cattcaaaca
     3661 gactggaacc atcggcctaa aaagtaagcc tgaactactt gataaaatcc aaaaaattgc
     3721 cgaggaacgt cgcgtagata ctccgactat tggcgaaatt actccgctta taggctcgga
     3781 aattaaccag tatctgccac tacttaaacc agactacttt ggtatccatt tagaaggtgg
     3841 cggtcgtatt gatggtgggc gtttgattga tattcttcag gaacaatttt tgaaaaatgg
     3901 tggtacacgt atctacggac aagcaaaact gctcgacaac catactgtcg aagtagataa
     3961 tcaggtgctt actgctgacc atattatctt agccacaggg gcctggttgc cacatattct
     4021 tgaacctctt ggttatcaag tggatgttcg accacaaaaa ggacaattgt tcgaattaga
     4081 tacagaattc gataccgaca attggccagt ttgtatgcct tacggagaga ttgacatcct
     4141 accatttgaa aatggaaaaa tcattattgg tgcaactcat gaagatgaca tgggctacga
     4201 tttagaacta gaccctgaaa aaatccaagc catgcatgat aaaatagctg aattcatgcc
     4261 tgatttggca aactatcctg tagccagaac tcgcattgga acgcgcgcct atacgtcaac
     4321 gtattcacca ttctacggaa atattgagga tatgcctaat gtctgggtag ctagtggtct
     4381 aggctccacc ggtctgacaa acggtccaat tatcggttgg caaattgcta aagaaattct
     4441 caaccaagaa acaaactttg accgtacacc atattctcca aatagatata ttctcaaaaa
     4501 ataagatacg
//
LOCUS       DBNFCX010000129         4451 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.129, whole genome shotgun sequence.
ACCESSION   DBNFCX010000129 DBNFCX010000000
VERSION     DBNFCX010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 4451)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4451)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4451
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.129"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            47..427
                     /locus_tag="AC1PJC_002069"
     CDS             47..427
                     /locus_tag="AC1PJC_002069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621040.1"
                     /translation="MSFINQFKSQSKTVLAAVAISAATLGFAGGMSISKSSTGVSTQS
                     QASLAQNNSAATNGQGAPQGMPPGKGGPSQGMPPGQGTPPHDATSGATQSNSSTSSDE
                     VNALKEKNQEIKAQISGDSSSSNQ"
     gene            622..1293
                     /locus_tag="AC1PJC_002070"
     CDS             622..1293
                     /locus_tag="AC1PJC_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HIP6621041.1"
                     /translation="MIKILLVEDDLSLSNSVFDFLDDFADVMQVFDGEEGVYEAETGV
                     YDLILLDLMLPEKDGFQVLKELREKGVTTPVLITTAKESLEDKGHGFELGADDYLTKP
                     FYLEELKMRIQALLKRAGKFNENTLTYGDVTVDLSTNSTTVNGEEVELLGKEFDLLVY
                     FLQNQNVILPKTQIFDRIWGFDSDTTISVVEVYVSKIRKKLKGTTFGENLQTLRSVGY
                     ILKNA"
     gene            1286..2665
                     /locus_tag="AC1PJC_002071"
     CDS             1286..2665
                     /locus_tag="AC1PJC_002071"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HIP6621042.1"
                     /translation="MPKRIGKLVYTDKFSFFIRYFAVFTLIFGLMTAIIFQLMRSTMY
                     QNSDNTLKRIKEEPAMAVGFAIARTYEPNSVFILQDSPTSEETTSSSSDSMPVPKEQK
                     NTRDGDQLRLGVNTHVLLYSKSGEMVNPDTFTGLADLPLDKEKLGEIKEAKVESSFGM
                     SEDYRYVTIELATDELGYYSSYDIKYATILVNVSQIKSSIETYESTVAIVMVSAWLIS
                     ILASIYLSNLSMRPILISYQKQKDFVENASHELRTPLAVLQNRLESLFRHPEATILES
                     SESIGSSLEEVRNMRLLTTNLLNLARRDDGLKVDMIDVQPNYFDEIFANYLMIAEENG
                     KTLTVNNLLHQPIRTDKVLIKQLLTILFDNAMKYTDDDGRIQITANIKDKSVYFTVAD
                     NGLGISDADKKKIFDRFYRVDKARTRQKGGFGLGLSLAQQIIKTLGGKISVRDNQPKG
                     TIFEVGLPK"
     gene            2766..3995
                     /locus_tag="AC1PJC_002072"
     CDS             2766..3995
                     /locus_tag="AC1PJC_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase domain-containing protein"
                     /protein_id="HIP6621043.1"
                     /translation="MRKVSRGVLTILLSATVLSACSGGGQELSERLEAAKIEFSKEKK
                     QLEAELTALKEEVQGNFYYQQLDTDKERRVYLQFVNGLSKRMQVIDIDSVNDEIYSRV
                     YFSVAHDYPEFYWLTDEAAMSGGVDILDLEEPVYPTDLSPTRNKIEEEVNKILAQAPI
                     GSDYEKVKYFYEVIIKQTDYDLEALQTNSVTWRSQGITSVLLDKKSVCAGYSRTFQYL
                     CKKAGIDCIYVTGIAKNGQNGEFGHAWNLVKINGQYYGVDTTWGDPVFDQAISGEAHT
                     DISYDYLCVPDEILERSRIADTDLLDYWGEEQYYEPRALTYPKCTDNSLNYYVQKGVY
                     FTSFDEAAVLQSITDQRLQGTDKVVLQFGTAEAMQQMVTLASTENNAIFQALGDVGEY
                     QYYYNDQTYTFELADWF"
     gene            complement(4222..>4451)
                     /gene="rpsT"
                     /locus_tag="AC1PJC_002073"
     CDS             complement(4222..>4451)
                     /gene="rpsT"
                     /locus_tag="AC1PJC_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001274003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HIP6621044.1"
                     /translation="NIKSAIKRAELNVKQNEKNSAQKSAMRTAIKAFEANPSEELFRA
                     ASSAIDKAETKGLIHKNKASRDKARLASKLA"
BASE COUNT         1424 a          745 c          958 g         1324 t
ORIGIN      
        1 ttagcgggac tcattctgat aatattctat tgaaaagagg aatttcatgt catttattaa
       61 tcaatttaag tcacagtcaa aaacagtact agctgctgtt gctatttcag ctgctacctt
      121 gggctttgca gggggaatga gtatttctaa aagctcaaca ggagtttcaa cacaaagtca
      181 ggcaagtttg gcgcaaaata attctgcagc aacgaatgga caaggagctc cccaaggcat
      241 gccaccaggt aaaggaggtc ctagccaagg tatgccacct ggacaaggta caccccctca
      301 tgatgcaaca agtggagcaa ctcagtcaaa ctcgagtact tcttctgatg aagtgaatgc
      361 tttaaaagag aagaatcaag aaattaaagc tcaaatttca ggggatagta gttcttctaa
      421 tcaataaaca ttgagatttt ggttttttac ttgttccatg atataatgaa cacgtatcaa
      481 taaatagtta gataaagcct acccgatcat tcatttttca gatggtcacg gtaggacttt
      541 atttaaccat ttctattaag gaccatgccc tgtgcccagg tctttggttt gtttattaaa
      601 ccgaaacgta aggagtatat gatgattaaa atattgttag tggaagatga tttaagtcta
      661 tcaaattctg ttttcgattt cttggatgat tttgcggatg ttatgcaggt ttttgatgga
      721 gaagagggtg tttatgaggc ggaaacaggc gtttatgatt tgattctttt ggatttgatg
      781 ttgcctgaaa aagatggctt ccaagttttg aaagagttac gtgaaaaagg tgttacgaca
      841 ccagttctga ttacaacagc caaggaaagt ctagaggata aaggccatgg ttttgaattg
      901 ggagctgatg actacttgac aaaaccattt tatttagaag aattgaagat gcgaattcaa
      961 gctctattaa aacgagcggg taagtttaat gaaaacacac taacttatgg ggacgtgacc
     1021 gttgacttat cgacaaactc tacaactgta aatggtgaag aagttgaatt gctaggaaaa
     1081 gaattcgatc tactagtcta cttcttgcaa aatcaaaatg ttatcttacc aaaaactcaa
     1141 atttttgacc gtatttgggg atttgacagt gacactacta tttcagtagt agaagtatat
     1201 gtttctaaaa ttaggaaaaa gttgaaagga acgaccttcg gggaaaatct tcaaaccctg
     1261 cgtagtgtcg ggtacattct aaaaaatgcc taagcgaatc ggaaaattag tgtatacgga
     1321 taaattttcc ttctttatcc gttattttgc agtatttacc ctgatttttg gcttgatgac
     1381 agctatcatt tttcaattaa tgcgttcaac tatgtatcaa aattcagata ataccttgaa
     1441 acggattaag gaagaaccag cgatggctgt tggttttgcg atcgcaagaa cctatgagcc
     1501 caactctgtc tttatacttc aagatagccc aactagtgaa gaaacgacga gctctagctc
     1561 agatagcatg cctgttccta aagaacaaaa aaatactaga gatggagatc agctgagatt
     1621 aggtgtcaat actcatgtct tactctatag taaaagtgga gaaatggtca atccggatac
     1681 ttttactggt ttggccgacc taccgttaga taaggaaaaa ttgggcgaaa ttaaggaagc
     1741 aaaggttgaa tcaagcttcg gtatgtctga agattatcgc tatgtgacga ttgagctggc
     1801 tacagatgaa ctaggttatt attcgtccta tgatataaaa tatgcgacaa ttttagtgaa
     1861 tgtcagccaa ataaaatctt ccattgagac ctatgaatcg acagttgcta ttgttatggt
     1921 atcagcttgg ctcatttcta tcttggccag tatttaccta tcaaatctta gtatgcgtcc
     1981 aattctaatt agctatcaaa agcaaaaaga ctttgttgaa aatgctagtc atgagttgcg
     2041 tacgccgttg gctgttctcc aaaatcgctt ggagagccta tttcgccatc ccgaagcgac
     2101 gattttagag agtagtgaaa gcatcggatc tagtttagaa gaagtccgaa atatgcgatt
     2161 attgacaacg aacctgctca atttggctcg tcgtgatgat ggcttaaaag tcgatatgat
     2221 cgatgtccaa cccaactatt ttgatgaaat ctttgctaat taccttatga ttgcagaaga
     2281 aaatggaaaa acactaacag ttaataattt gcttcatcag ccgattcgaa cagacaaggt
     2341 ccttattaaa cagttgctta ccattttatt tgacaatgcc atgaagtata ccgacgatga
     2401 tggcagaatt caaattacag ctaatatcaa ggataaatct gtctacttca cagttgccga
     2461 caatggtctg ggaatcagcg atgccgataa gaagaaaatc tttgatcgct tttatcgagt
     2521 tgataaggcc agaacgcgtc aaaaaggtgg tttcggtcta ggattatcgt tggctcagca
     2581 aattattaag acactaggtg ggaaaatctc tgttagagat aaccaaccga aaggaactat
     2641 ttttgaggta ggattaccta agtaaaacaa tattattagg ctaggaaaat tctagtctaa
     2701 tttttttgtg tagttcgtca gaagtctcct aattatgtta tacttaaaca agaatggagg
     2761 taaatatgag gaaagtttct cgtggcgttt taaccatatt attatcggcg acagtccttt
     2821 ctgcttgttc aggaggagga caagagctga gtgaacgttt ggaagcagct aaaattgagt
     2881 tttctaaaga aaaaaagcaa ctagaagcag aattaacagc attaaaagaa gaggttcaag
     2941 gaaatttcta ctaccaacaa ttggatactg ataaggaacg tcgtgtctat ctccaatttg
     3001 ttaatgggct cagcaagcgg atgcaagtga tcgatattga ttctgttaat gatgaaatat
     3061 attcgcgcgt ctatttttct gtcgctcatg attatccaga attttactgg ctaacagatg
     3121 aagcggcaat gagtggcgga gttgatatat tggatttaga agagccagtg tatccgactg
     3181 atttatctcc gacacgaaat aaaatagaag aggaagtgaa taagatactt gctcaggcac
     3241 caatagggtc ggactatgag aaggttaaat atttttacga ggtgattata aagcaaacgg
     3301 attacgacct tgaagcccta caaaccaact ctgtcacgtg gagaagccaa ggaattacca
     3361 gtgtgctatt agataagaaa tccgtttgtg ctggctatag tcgcaccttc caatatctat
     3421 gtaaaaaagc aggcattgat tgtatctatg tcacagggat tgcaaaaaat gggcaaaacg
     3481 gtgagtttgg gcatgcttgg aatctagtca agataaatgg acaatactat ggtgtcgata
     3541 cgacttgggg agatccagtt tttgatcaag ctataagtgg agaagcgcat acagatattt
     3601 catacgatta tctatgtgtc cctgatgaaa tattagagag aagtagaatt gctgataccg
     3661 acctactcga ttattgggga gaagaacaat attacgaacc tagagcattg acctatccaa
     3721 agtgtacaga taattcattg aattactatg ttcaaaaggg agtttatttc acaagctttg
     3781 atgaagctgc agttttacag tccatcactg accagcgact acaaggtaca gataaagtag
     3841 tcttgcaatt cggaacagca gaagcaatgc aacaaatggt tacattggcc tctactgaaa
     3901 ataatgctat ttttcaggct ttgggcgatg taggagagta tcagtattat tataatgacc
     3961 aaacctatac atttgaactg gcagattggt tctaacgaat tagtttgaat ctctaggagc
     4021 gtgttcttcc ctaataataa aaaatagggg gcgggaaaga catccatggt ggctccgccc
     4081 tcacccacag aataatgaaa acgaaataaa gccctcacta ggtgtataat cttagtgagg
     4141 gctttgtggt tgacgagtta aggatgttac tcatcgaggg gaaaaataaa aaaaaaggaa
     4201 acccaaaggt ttctttttta attaagcaag ttttgatgca agacgtgctt tatcgcggct
     4261 tgctttgttt ttgtgaatca aacctttagt ttctgcttta tcgattgctg agctagcagc
     4321 acggaaaagc tcttcagatg ggttagcttc aaatgctttg attgcagtac gcatagctga
     4381 tttttgtgct gagtttttct cgttttgttt aacgttcaat tcagcgcgtt tgatagctga
     4441 cttaatgttt g
//
LOCUS       DBNFCX010000130         4425 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.130, whole genome shotgun sequence.
ACCESSION   DBNFCX010000130 DBNFCX010000000
VERSION     DBNFCX010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 4425)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4425)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4425
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.130"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            81..830
                     /locus_tag="AC1PJC_002074"
     CDS             81..830
                     /locus_tag="AC1PJC_002074"
                     /EC_number="2.1.1.223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016430 - tRNA
                     (adenine-N6)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA1(Val) (adenine(37)-N6)-methyltransferase"
                     /protein_id="HIP6621045.1"
                     /translation="MQKIDLLDGERIDQLFSTDVQIIQNREVFSYSIDSVLLSRFPKM
                     PAQKGLIVDLCSGNGAVGLFASTRTKAQIIQVELQERLADMNRRSIALNGLEEQLSVV
                     NDDLANLPQYDLRSKVDLMLCNPPYFKVDKESNLNESEHYLLARHEIATNLDSICQVA
                     QQVLKSNGRLAMVHRPDRFLDILDTLRTYKLAPKRIQFIYPKASKEANMLLIEAIKDG
                     SVDGLHILPPLVVHEENGDYTPAIREIYYGK"
     gene            820..1092
                     /locus_tag="AC1PJC_002075"
     CDS             820..1092
                     /locus_tag="AC1PJC_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HIP6621046.1"
                     /translation="MENKAYFYVLECADGSLYTGYTTDVEKRLATHNRGKGAKYTRGR
                     LPVSLLYQEAFASKQEAMSAEALFKKRSRQSKLDYIAEMTKKPRTK"
     gene            complement(1108..1719)
                     /locus_tag="AC1PJC_002076"
     CDS             complement(1108..1719)
                     /locus_tag="AC1PJC_002076"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008753 - NADPH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA];
                     GO_function: GO:0050446 - azobenzene reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent NADH-azoreductase"
                     /protein_id="HIP6621047.1"
                     /translation="MATVLIVKAHPLDAQKSYALRALEEFQTRYASLYPEDRIEIVDV
                     FEDQIPALDKPLLESMGTAKKGESISPEQAERLDRYNSLTQQFLAADKIVVVNPLWNL
                     NVPSQLVSWINTINVAGLTFMYGPEGSIGLVKDKKLLHIQSNGGVYAGQDPAAQYIKS
                     IFEFLGFEDIHQVFIEGQSADPSQAQAIFEEAMGKIDTILEVF"
     gene            complement(1841..2248)
                     /locus_tag="AC1PJC_002077"
     CDS             complement(1841..2248)
                     /locus_tag="AC1PJC_002077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase family protein"
                     /protein_id="HIP6621048.1"
                     /translation="MITYKQNPQLDFQAVLEIYDSVGWTNYTDWPTMLQKALEHSLLV
                     LAAVDGDRLVGLLRAVGDGYSIVFIQDILVLPTYQRQGIGRTLLERAIAHFPGIYQLH
                     LLTDNTEKTRSFYEAIGFTAVDSLDCVAYTYLK"
     gene            complement(2377..3957)
                     /locus_tag="AC1PJC_002078"
     CDS             complement(2377..3957)
                     /locus_tag="AC1PJC_002078"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000673092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HIP6621049.1"
                     /translation="MKFTDLQLSEDILLAVEKAGFETPSPIQEQTIPLALEGKDVIGQ
                     AQTGTGKTAAFGLPTLNKIDTNNQAIQALIIAPTRELAVQSQEELFKFGREKGVKVRS
                     VYGGSSIEKQIKALRSGAHIVVGTPGRLLDLIKRKALKLDGVETLILDEADEMLNMGF
                     LDDIEAIIERVPESRQTLLFSATMPEPIKRIGVKFMKEPEHVKIAAKELTNVNVDQYY
                     IRVKEHEKFDTMTRLMDVDQPELSIVFGRTKRRVDELTRGLKLRGFRAEGIHGDLDQN
                     KRLRVIRDFKNDQIDVLVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAG
                     QSGQSITFVSPNEMGYLAIIEDLTKKRMKGLKPATAEEAFEAKKKVALKKIERDFADE
                     TIRGNFDKFKKDAIQLAAEFTPEELALYVLTLTVQDPESLPEVEIAREKPLPFKFAPG
                     QAKGKGGRGGRDRDRGGRRDGDRNRDRGGRRGDRNDRNRRDDKFKRDNRRQDNKKPHQ
                     RTSSEKKTGFVIRNKGER"
BASE COUNT         1189 a         1020 c          932 g         1284 t
ORIGIN      
        1 agtgggccag ggctttttgc ccagcctctt ttcattcaaa ataaacagtg attttcattc
       61 aaagatggta taatatacct atgcaaaaaa ttgatttact agacggagag cggattgacc
      121 agctcttctc gacagatgtt cagattattc aaaatcggga ggtatttagc tactcgattg
      181 acagcgttct tctttcgcgg tttccaaaaa tgcctgctca gaaggggctg attgttgacc
      241 tttgtagcgg aaatggggcg gtgggtctct ttgcttctac acgcaccaag gcccagatta
      301 ttcaggtcga gttgcaggaa cgcttggcgg atatgaaccg ccgctccatc gccctcaacg
      361 gtctggagga acaactttcg gttgtcaatg acgacttggc aaatctaccc caatatgacc
      421 tacggtccaa ggttgatttg atgctctgca atcctcccta tttcaaggta gataaagagt
      481 caaacctcaa tgaaagcgag cattatcttc tggccagaca cgagattgca accaacctag
      541 atagtatttg tcaggtggcc caacaggtgc taaagtccaa tggtcgcttg gccatggtcc
      601 acaggcccga ccgattttta gatattttgg acacactaag aacctacaag ctggctccca
      661 aacgcatcca gtttatctat cccaaggcca gcaaggaggc caatatgttg ctgattgagg
      721 ctatcaagga cggctcggtg gacggtctgc atatcctgcc acctctggtt gtccatgagg
      781 aaaacggcga ctatactccg gctattcgtg agatttatta tggaaaataa ggcctacttt
      841 tatgtcttgg aatgtgccga cgggagtctt tatactggtt atacgactga tgtggagaag
      901 cggcttgcta cccataatcg tgggaaaggg gccaagtaca cccgcggacg cttgcctgtc
      961 agcttgctct atcaagaagc ctttgctagt aagcaggaag ccatgtctgc cgaggctttg
     1021 tttaagaaac gcagtcggca gagtaaatta gattatatcg cagaaatgac aaaaaaacct
     1081 cgtacaaaat agtacgaggc tttttattta aaatacttcc aaaattgtat caattttccc
     1141 catagcctct tcaaaaatag cctgagcctg gcttggatca gctgattgtc cttcgataaa
     1201 gacctgatgg atgtcttcaa atccaagaaa ctcaaagata gacttgatat attgggcagc
     1261 tggatcttga cctgcataaa caccaccatt ggactggatg tgcaggagct ttttatcctt
     1321 gaccaagccg atagagcctt ctggaccata cataaaggtc aggcctgcta cattgatggt
     1381 gttgatccag gataccagct gacttggcac attgaggttc caaaggggat tgaccacgac
     1441 aatcttatct gctgcaagaa attgttgggt caaggaattg taacggtcca atcgttctgc
     1501 ttgctcagga ctgatactct cgcctttttt agcagttccc atagattcta acaaaggctt
     1561 atccaaagct ggaatctggt cttcaaaaac atctactatt tcaatccgat cttctgggta
     1621 caaactggcg taccgagttt gaaactcttc caaagcccgc aaggcgtagg acttttgtgc
     1681 gtcgaggggg tgagccttta caattaatac agttgccatt gttcatctcc tttgttacta
     1741 attattgata attatattct actctttttg atttgaaatt caaatcattt gctcgaagca
     1801 aaaggctggt caaccagcct ctccatttct aaattgttcc ttattttaaa taggtgtaag
     1861 cgacacagtc caggctatca acggctgtaa agccaattgc ctcatagaaa gaccgtgttt
     1921 tctcagtatt gtccgtcaag agatggagtt gataaatacc tggaaaatgg gcaatggccc
     1981 tctccaaaag agtgcgacca attccctgac gctgataggt tggcagaacc aagatgtcct
     2041 gaataaaaac gattgaatac ccgtcaccaa ctgctcgcaa gagacccact agacggtcac
     2101 cgtcaacggc agcaagaacg agcagactat gttccaaggc cttctgtaac atggtaggcc
     2161 agtcagtata atttgtccaa ccaactgaat catagatttc aaggacagct tgaaaatcga
     2221 gttgaggatt ttgtttgtaa gtaatcatgt ctttctcctt tgtatttttt tagaatacaa
     2281 aggttctatc cattgtcaaa atgcccatgg tcacccctcc tgttttacta catttagtat
     2341 aacaaaaact gctccaatta tgaagcagtt tcaactttat ctctcccctt tattgcggat
     2401 aacaaagcct gttttctttt cacttgatgt gcgttggtgt ggttttttgt tgtcctgacg
     2461 gcggttatcg cgcttgaact tgtcgtcacg acggttgcgg tcgttacgat caccacggcg
     2521 tcctccacgg tctcgattgc ggtcaccgtc acgacggcca ccacgatcac ggtcgcgacc
     2581 tccacgtcca cctttgccct tggcttgacc aggtgcaaac ttgaatggca gtggtttttc
     2641 acgcgcaatt tctacctctg gcagactttc tggatcctga acagtcaagg tcaatacata
     2701 aagcgctaac tcttcagggg taaattcagc cgctaactga atagcatctt tcttgaactt
     2761 atcaaagttt ccacgaatgg tctcgtctgc gaagtcacgc tcaatctttt tcagagcaac
     2821 ttttttctta gcttcaaaag cctcttcagc ggttgccggc ttgagtccct tcatacgctt
     2881 cttagtcaaa tcttcgataa tggccaagta gcccatctcg tttggcgaaa caaaggtaat
     2941 agactgacct gattgacccg cacgacctgt acgaccgata cggtgaacat agctttctgg
     3001 gtcctgtgga atatcgtagt tgtagacatg tgttacacct gaaatatcca aaccacgggc
     3061 cgcaacgtcc gtcgcaacaa ggacatcaat ctggtcattt ttaaaatcac ggatgacacg
     3121 gaggcgcttg ttctggtcca aatctccgtg gataccctct gcacggaagc cacgcagttt
     3181 caaaccacga gtcaattcat caacacggcg cttagtacga ccgaagacga tagacaattc
     3241 tggctggtca acgtccatga ggcgtgtcat ggtgtcaaat ttttcatgtt ctttgacacg
     3301 gatatagtat tggtccacgt tgacgttggt caattccttg gccgcaatct taacgtgctc
     3361 aggctctttc atgaatttga caccaatacg cttgattggc tctggcatag tcgcagaaaa
     3421 tagtagagtc tgacgacttt ctggcacacg ttcgatgatt gcttcaatat cgtccaagaa
     3481 gcccatattg agcatctcat cagcctcatc aagaataagg gtttcaacgc cgtcaagctt
     3541 gagagcttta cgtttgatca agtccaagag acgaccaggt gtaccaacaa caatgtgggc
     3601 accagagcga agggccttga tttgtttttc aatgctagaa ccaccgtaaa cagagcggac
     3661 tttcacaccc ttttcacgac caaatttgaa gagttcttcc tgactctgca ccgccaactc
     3721 acgcgttggg gcaataatta gggcttgaat tgcttgattg tttgtatcaa ttttgttgag
     3781 agttggcaaa ccaaaggctg cagttttccc tgtccccgtc tgcgcttgac caatcacatc
     3841 ttttccttcc agagcaagcg gaatggtctg ctcctggatt ggtgacggcg tttcaaaacc
     3901 agccttctca acggcaagca aaatatcttc tgataattgt aaatctgtaa atttcaatgt
     3961 attctctttt ctaaaaggca gtgcgaagct accttatcta actttttttg taacaagata
     4021 tcagggtcga accactgata ttggatttgc aacttaccaa gtataacaca atctaacaat
     4081 aatagttaat atttaccttt aaaaagtcaa taatacgttt tcatgaggag tccatcattt
     4141 ttatagacat ttgaactagc tttgatacat agacactttc ggtttgcctt actctagtac
     4201 cagctccttg tctgaaagtt atactaaatc agacattgtc gacttgattt gatgaacttc
     4261 agttctatct gcatctgcgt cgcctagtct gtttttgatt ttcattgagt attaattcat
     4321 tcgactataa gaaaagagaa aactagttat acatgcacaa ctgggtttct cttgtatttt
     4381 tatttatgat tattcttttt caatgcttgc aagaaccagt ccaaa
//
LOCUS       DBNFCX010000131         4360 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.131, whole genome shotgun sequence.
ACCESSION   DBNFCX010000131 DBNFCX010000000
VERSION     DBNFCX010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 4360)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4360)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4360
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.131"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            287..1318
                     /gene="holA"
                     /locus_tag="AC1PJC_002079"
     CDS             287..1318
                     /gene="holA"
                     /locus_tag="AC1PJC_002079"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HIP6621050.1"
                     /translation="MLVIEQIEQLKKEKLELLTVLCGEDIGQYQIAKDLLLRKLDFDA
                     ADLGFAYFDMSEADYYQVDLDLVSLPFFSDEKVVILDYFADLTTDKKRHLTDDELKQF
                     EAYLENPVETTRLVILAPGKLDSKRRLVKLLKRDGLVLEANPLKEMDLKNHFQKEIMR
                     LGLQMGGEVFQYLLEKSNFDFAEISKNLVFLQSYKGKETIEISDIDAAIPKTLQDNIF
                     DLTQLILQSKVDEARNLVCDLRLQGEEEVKLIAIMLTQFRTYLQVQILVEQGRGEQQI
                     VAELSTIMGRKVNPYQVKYALRDSRHLSIGFLKKVVKLLIDTDFQIKTGQFDKDYLFD
                     LVLLKIATA"
     gene            1432..2037
                     /gene="sodA"
                     /locus_tag="AC1PJC_002080"
     CDS             1432..2037
                     /gene="sodA"
                     /locus_tag="AC1PJC_002080"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018378422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase SodA"
                     /protein_id="HIP6621051.1"
                     /translation="MAIILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALE
                     KHPEIGEDLVALLSDVDQIPSDIRQALINNGGGHLNHALFWELLSPEKTEISAELAAD
                     IDATFGSFDAFKEAFTAAATTRFGSGWAFLVVNKEGKLEVISTANQDTPIMQGLKPIL
                     ALDVWEHAYYLNYRNVRPNYIKAFFEVINWDKVNELYKAAK"
     gene            2301..4325
                     /locus_tag="AC1PJC_002081"
     CDS             2301..4325
                     /locus_tag="AC1PJC_002081"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017650655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface-anchored 5'-nucleotidase"
                     /protein_id="HIP6621052.1"
                     /translation="MKKNIRLKSSVLALVAGFSVITTQAVLADELAVQIMGVNDFHGA
                     LDTTGTARLEGETVRNAGTAALLDAYMDDSQAEFEETAAETETPAESIRVQAGDMVGA
                     SPSNSGLLQDEPTVKVFNKMDVEYGTLGNHEFDEGLDEYNRIMTGEAPKEGQFNEIVD
                     NYTHEAAKQEIVIANVIDKETGEIPYGWKPYAIKTIPVNDKEANIGFIGVVTTEIPNL
                     VLKKNYEQYTFLNEAETIAKYARELAEKGVNAIVVLAHVPATSKDGVAAGEAADMIAK
                     LNEIYPEHSVDLVFAGHNHVYTNGTTGKTLIVQATSQGKAYADVRAVYDTDIADFKDV
                     PTAKIIAVAPGQKTPSPEIQAIVNEANTIVKKVTEQKIGTASQATDISREVNEFKESA
                     VGNLVTSAQLAIAKKSGYNVDFAMTNNGGIRADLKVQEDGTVTWGAAQAVQPFGNILQ
                     VVQMTGEQIYTALNQQYDEGEKYFLQMSGIKYIYTKADNPTEENPYKVVKAFKEDGTE
                     IVPTETYTLVINDFLFGGGDGFSIFKEAKLIGAINPDTEVFVEYLTDLEKAGQTISAT
                     ITGRKAFVEEYVEEPKAEEQGDTAGTTTDTKTPEKASDGGDSVANQKANEQPAPSGSV
                     APISNKKAEKASGNQTLPNTGQEALGSLLISLGGLVSLGMAVSVRRKEGE"
BASE COUNT         1467 a          717 c          962 g         1214 t
ORIGIN      
        1 cggattcaat atatacaaca aaacatcaat ttttccgaaa agcacgttga tatattatat
       61 aatcattagt agtaatgagt gatgtaaaaa tattggagga gagtgcaatg ggaatggatg
      121 ttgttcagat gaaatacatc aggtgctagg ttgattggta tctgattttt tatggaaggc
      181 acagtagtga ttatttgtaa aaaagtcaaa tagtatactt ttacaaatcc tcttgttttc
      241 taattctatt tcaaatggta taatttatta agaattagag gtatacatgt tagttattga
      301 acagattgaa caattaaaaa aagagaaatt ggagcttctg accgttttat gcggtgaaga
      361 catcggacaa taccaaatag cgaaagactt acttctgagg aagcttgatt ttgatgcggc
      421 agatttaggt tttgcctatt ttgatatgtc ggaggctgat tattatcagg tagacttgga
      481 cctagtttct cttcccttct tttcagatga aaaagtagtg attcttgatt attttgcaga
      541 tttaacgaca gataaaaaac ggcatttgac agatgatgaa ctcaaacagt ttgaggccta
      601 tttggaaaat cctgtcgaaa caacacgttt ggtcattcta gcaccgggta agttggacag
      661 taagcgtcgt ctggtcaaac tcctcaaacg agatggacta gtattggaag ccaatcctct
      721 gaaggagatg gatttaaaaa atcatttcca aaaggaaata atgcgacttg gattgcagat
      781 gggaggagag gtttttcaat atcttttaga aaagtccaat tttgattttg cagaaattag
      841 taagaaccta gtctttcttc aatcttataa gggaaaagag acgattgaaa tttcagatat
      901 tgatgcggct atccccaaaa cactacaaga taatatcttt gatttaacac agttaattct
      961 acaatccaag gtagacgagg ctcgcaactt agtttgtgac ttgcgattgc aaggggagga
     1021 agaggttaag ttgattgcca tcatgttaac ccaatttcga acctatctac aagtgcaaat
     1081 actagtagag caaggccgag gggagcagca gatagtagct gagttatcaa ctattatggg
     1141 gcgtaaggtg aatccatacc aagtaaagta tgctttgcgt gattcacgcc atctgtccat
     1201 tggatttttg aaaaaagtcg tcaagctcct aatcgataca gattttcaaa ttaaaaccgg
     1261 ccaatttgat aaggattatt tatttgattt ggtattatta aaaattgcga ctgcatagta
     1321 aaaagagtat tcttagatcg agggtcaacc gtggtttcag acaaataaat tgaaaaggct
     1381 ctcacattgg agtagaatag aactatcact tagtatagga gaaaaacgaa aatggcaatt
     1441 attttaccag accttccata cgcatacgat gccttggaac cacatattga tgcagaaaca
     1501 atgacccttc accacgataa gcaccatgcg acttatgttg caaatgctaa tgctgccctt
     1561 gaaaaacatc ctgaaattgg cgaagacttg gtagctcttt tgtcagatgt ggaccaaatt
     1621 ccttcagaca tccgccaagc tttgattaac aacggtggtg gtcatttgaa ccatgctctt
     1681 ttctgggagt tgctttcacc tgaaaaaaca gaaatttcag cagaattggc agcagatatt
     1741 gatgcaactt ttggttcatt tgatgctttc aaagaagcct tcactgcagc agcaacaact
     1801 cgtttcggtt caggttgggc tttcttggtt gttaataaag aaggtaagtt ggaagttatc
     1861 tcaactgcta accaagacac accaatcatg caaggtttga aaccaatctt ggcattggat
     1921 gtttgggaac atgcttatta cctcaactac cgtaatgtcc gtccaaacta catcaaagcc
     1981 ttctttgaag taatcaactg ggacaaggtt aacgaacttt ataaagcagc taaataagaa
     2041 cagttctctt ccgtttggaa gagatttttt agttgcgaag agtactttgg agagaattgt
     2101 gtaagggaag agggctgatt tttcgtatta tggataaaaa caacaagata ttttcagaaa
     2161 aatgatgtaa aagtaagaat aaacgaatat ttttataatt ttttgttata aatgactgat
     2221 ttaatattga aaagccgtaa gaaaaggatt attatagata tgtcaatatg acaaaaaata
     2281 gaaggagcat tgatttgctt atgaaaaaga atattcggtt gaaaagcagt gtactagctc
     2341 ttgtagctgg ttttagtgtc attacaacac aggctgtttt agcagatgaa ttagctgtcc
     2401 aaattatggg agttaatgat ttccatggtg cgcttgatac gacagggaca gcgcgattgg
     2461 agggggaaac agttcggaat gcaggaactg cagccttgct tgatgcttac atggatgatt
     2521 cgcaagcaga atttgaagaa acagcagcag aaacagaaac acctgcagag tctattcgtg
     2581 ttcaagccgg agatatggtt ggtgcaagtc catcgaattc tggactttta caagatgaac
     2641 caactgtaaa agtctttaac aaaatggatg ttgaatacgg tactttgggg aaccatgaat
     2701 ttgatgaggg acttgatgag tataaccgta tcatgactgg tgaagctcca aaagaaggtc
     2761 agtttaatga gattgtagat aattatactc atgaagctgc caaacaggag attgttattg
     2821 ctaacgttat tgacaaagag acgggtgaaa ttccgtatgg ctggaaaccg tatgctatta
     2881 agactattcc tgtaaatgat aaagaagcaa atattggctt tattggtgta gttacgacag
     2941 aaattcctaa tcttgttttg aagaaaaact atgagcagta tacttttttg aatgaggcgg
     3001 agacgattgc aaaatatgcg cgtgagttag ctgaaaaggg tgtaaatgcg atagttgtac
     3061 tggctcacgt cccagctaca agcaaggatg gtgtggctgc tggtgaagct gcagatatga
     3121 ttgctaagct aaatgaaatc tatcctgaac actcagttga ccttgtgttt gccggtcaca
     3181 accatgtcta tacaaacggt acaacaggca aaaccttgat tgtacaagct acctcacaag
     3241 gtaaggctta tgcagatgtt agagctgttt atgatacaga tattgccgac tttaaagatg
     3301 ttccgactgc gaaaattatt gcagtagcac cagggcagaa aacaccaagt ccagaaattc
     3361 aggcgattgt aaacgaagca aataccatcg ttaaaaaagt aacagagcaa aaaattggta
     3421 cggctagtca agcgacagat atttcacgcg aagtgaatga atttaaagaa agtgctgtgg
     3481 gcaatctagt aacatcggct caattagcta ttgctaagaa atcaggctat aatgttgact
     3541 ttgcaatgac caacaatggc gggattcggg cagatttgaa ggtccaagag gatggaacag
     3601 ttacttgggg agcagcacaa gctgttcaac catttgggaa tatcctacaa gtcgttcaaa
     3661 tgacaggtga gcagatttat acagccttaa atcaacaata cgatgaaggc gaaaaatatt
     3721 tccttcaaat gtctggaatt aaatatatct acacgaaagc agataatcca acggaagaaa
     3781 atccttacaa ggttgttaaa gccttcaaag aagatggaac agagattgtt ccgacagaaa
     3841 cctatacact tgtcatcaat gacttcctat ttggtggtgg ggatggtttc tcgattttca
     3901 aagaagctaa gctgattggc gctatcaatc cagatacaga agtatttgtg gagtacttga
     3961 ctgatttaga aaaagcaggt caaaccatta gtgcaactat tacaggtaga aaagcatttg
     4021 tcgaggagta tgtagaagaa ccaaaagcag aagaacaagg agatactgct gggacaacta
     4081 ccgatacgaa aacacctgaa aaagcaagcg acggtggcga tagtgtagca aatcagaaag
     4141 caaacgagca accggcacca tctggaagtg tggctcctat ttcaaataag aaagctgaaa
     4201 aagcatcagg aaatcaaaca cttccaaata ccggtcaaga agccctaggc tcacttctta
     4261 ttagcttggg tggcttagtt tcactcggaa tggctgtctc agtgagacgt aaggaagggg
     4321 agtaggaatc aagcataaaa acgacaaact ttcgaagtac
//
LOCUS       DBNFCX010000132         4335 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.132, whole genome shotgun sequence.
ACCESSION   DBNFCX010000132 DBNFCX010000000
VERSION     DBNFCX010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 4335)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4335)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4335
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.132"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(136..1002)
                     /locus_tag="AC1PJC_002082"
     CDS             complement(136..1002)
                     /locus_tag="AC1PJC_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIP6621053.1"
                     /translation="MSVQLGSRLKQKRKEMKLSQKELAEGVCKQGQISRIESGAYTPG
                     SELLFELSKKLNVSMNHFFEDTVSEQEEELVEFKTVVRNFLVHRDYQGLRYVYELESN
                     NKHRLSVANQLYLEWIGGLVDFYFYDKKKEAISKMEYLLEKLESSNLFFLQVSNTLLN
                     FYFDVNDEELFDVQFERLIEKTDNFQPITIEELELKIKLQYNISRYLWLKKDYIQAIA
                     SITKAIEFCRSHRSYYSLPDLFCLLGNVHEELGNTESANQHFRQAYFLYKLDANRQME
                     LNLERYIEEDKI"
     gene            complement(1238..1723)
                     /gene="tpx"
                     /locus_tag="AC1PJC_002083"
     CDS             complement(1238..1723)
                     /gene="tpx"
                     /locus_tag="AC1PJC_002083"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA];
                     GO_function: GO:0016684 - oxidoreductase activity, acting
                     on peroxide as acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HIP6621054.1"
                     /translation="MTTFIGKPVTLVGPQLRVGDTAPDFVLMANDLSLKSLKDFGKQT
                     KVISVVPSIDTGICDTQTRRFNQELADRDNTVVITISADLPFAQKRWCGAAGLEDAVT
                     LSDYYDHAFGKSYGVLMREWNLLARAVFVLNADNEITYVEYLDNVNEHPDYEAALEAV
                     K"
     gene            complement(1802..4252)
                     /locus_tag="AC1PJC_002084"
     CDS             complement(1802..4252)
                     /locus_tag="AC1PJC_002084"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0140358 - P-type transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HIP6621055.1"
                     /translation="MKQASYPIQGMTCASCAMTVEKAVGKLAGMEEASVNLATEKLSV
                     SYDEKLLGLEDIRQAVEKAGYQLVDNLVTESYDISGMTCASCAMTVEKALGKLEGVEE
                     VTVNLATEKATIRYSRDRQNPASLERAVEQAGYQLIRPEEVEEAADKGPSKEEKLWHR
                     FVWSAAFTLPLLYIAMGPMLPWGGLPLPALLHQPLVYAISQVILLIPVLYIGRSFFQK
                     GFKTLLQGHPNMDSLIAVGTGAALVQGLLMIAFLLMGKEVAMHGHHPELYFESAAVIL
                     TLITLGKYFEARAKGQTSEAIKKLMDLAPKTAQVLRNGQEIQVPIEEVVVGDQVIVRP
                     GQQIPVDGQVLEGQTRVDESMLTGESLPVKKALGDNVFGGTLNQQGAITMQATKVGRD
                     TTLAQIIRLVEEAQGSKAPIAKLADQVSAIFVPVVMGLALLSGLAWYFLGQESWIFSL
                     SIIIAVLVIACPCALGLATPTAIMVGTGKGAENGLLFKSGQAIETLQGVNTIVFDKTG
                     TITEGKPQVTDIHLLSTKNREQVLQLAASSEQFSEHPLAQALLQAAQTEKIDLLPATD
                     FQALSGRGLSVAIAEQTIYLGNERLMREQGIDVSKGRAVAETFARQAKTPVFLASQQE
                     LLAVIAIADKVKETSRQAVQALQTMGLEVVMLTGDNEKTAQAIAKEVGIEQVVSQVLP
                     DDKANQVKLLQEQGKTVAMVGDGINDAPALAQARVGLAIGSGTDIAIESADIVLMHSD
                     ILDVVKAVKLSQATMRAIKQNLFWAFAYNVIGIPIAMGLLHVFGGPLLNPMFAGAAMA
                     LSSVSVVLNALRLKTYKL"
BASE COUNT         1210 a         1031 c          832 g         1262 t
ORIGIN      
        1 ataattaaaa gaattttgca aattaaaaac gcagaaatca tgttagcaaa ttggctaatt
       61 ccctgcgttt aaatatgtac aactcaatat ttttatctac tatcaacttt tgccaatctt
      121 tggtcattag agttcctaga ttttatcttc ttctatatat cgctccaaat tcaattccat
      181 ttgtcggtta gcatccaatt tatataaaaa atatgcctga cgaaaatgtt gattcgcact
      241 ctctgtattt ccaagttctt catggacatt acctagtaaa caaaataaat cgggtaatga
      301 ataatagctc ctgtgtgacc tacaaaattc gatggccttt gtgatgctag ctatagcttg
      361 gatgtaatcc ttctttagcc ataggtaacg tgaaatgtta tattgaagct tgatttttaa
      421 ttccaattct tcaatcgtga tcggttggaa attatccgtt ttttctatca gtctttcaaa
      481 ttgtacatca aataattctt catcattaac atcaaaataa aaatttagga gtgtatttga
      541 tacttgtaaa aaaaataaat tagaactctc caatttttct agtaaatatt ccattttaga
      601 tatggcttcc ttctttttat cataaaaata aaaatcgact aatccaccta tccactctaa
      661 gtataattga tttgctaccg ataaacgatg tttattatta gactccaatt cataaacata
      721 tcgtagtcct tggtaatctc tatggactaa gaaatttcgg acaacagttt taaattctac
      781 taattcctcc tcctgctcag aaacagtgtc ttcaaaaaag tgattcatcg aaacatttag
      841 tttttttgat aattcaaaaa gcaattcaga gcctggagta taagcaccac tctcaattct
      901 actaatttga ccttgtttac atacaccttc tgccaattct ttctgagata atttcatctc
      961 ttttcttttt tgttttaacc tagagcctag ttgtacactc attgttgtta cctcactcgt
     1021 attatacaac tattctagca cttataaatt ttaaagacaa taaaaatatc catttgcata
     1081 ttatttatga aatctgtatc agaatatgta tgttatctcc tcgtttcata ctaaatcatg
     1141 aacatcccct cttatcacaa cgtatcatca caataaattt ctagcaggat aactgagcgt
     1201 caaaaaacga tgcccgttcc gacaccgtta tattctttta tttaacagcc tccaaagccg
     1261 cttcataatc tggatgttcg ttgacattgt ccagatattc tacataggtg atttcattgt
     1321 cggcattaag gacaaagacc gcacgtgcca gcaaattcca ctctcgcatg agcacaccgt
     1381 aggattttcc aaaggcatgg tcatagtaat ccgacagggt cactgcatct tccagtccag
     1441 cagctccaca ccagcgtttt tgggcaaagg gcagatcagc tgaaatggtg atgacaaccg
     1501 tattgtcacg atcagccagt tcctgattga agcgacgggt ctgggtatcg caaatccctg
     1561 tgtcaataga aggtacaaca ctgatgacct tggtctgctt gccaaagtcc ttcaaacttt
     1621 tcaagctcag gtcattggcc atgaggacaa agtcaggagc cgtgtctccc actcgcaact
     1681 gcggacctac caaggtcacc ggttttccaa taaaggttgt cataaacatc tcccttgcac
     1741 ttaatatatc tattgtaagc gtttatgtaa aaaaatacca gttttttgac tggtattttt
     1801 gctatagttt gtaggttttc aatcgcagag cgttcaagac gactgacact gagctgaggg
     1861 ccatggctgc acctgcaaac ataggattaa gcagaggtcc accaaataca tgtaacagac
     1921 ccatagcgat tggaatgcca atcacattgt aagcaaaggc ccagaagaga ttttgcttga
     1981 tggccctcat ggttgcctgg ctgagtttga cagccttgac cacatccaaa atgtcactat
     2041 gcatgaggac aatgtcggca gactcaatgg caatatcagt ccctgaacca atggctagac
     2101 ccacacgggc ttgagctaga gctggcgcat cgttgatgcc atcccccacc atagcgactg
     2161 tcttgccctg ttcttgtaag agcttgactt ggttggcctt gtcatctggc aggacctgac
     2221 tgaccacctg ctcaatgcct acttccttgg caatggcctg ggcagttttt tcattgtccc
     2281 ctgtcagcat gacaacttct agtcccatgg tttgcagagc ctgaacagcc tgacggctgg
     2341 tctcttttac tttatcagca atggcaatga ctgctagtaa ttcttgctgg ctggctagga
     2401 aaacaggcgt cttagcttgt cgggcaaatg tttccgcaac tgcacgtcct ttggaaacat
     2461 caattccctg ttcccgcatc aaccgttcat ttcccagata gatggtctgc tctgctattg
     2521 ccaccgaaag accacgacct gaaagagcct gaaaatctgt ggcgggcaag agatcaatct
     2581 tttctgtctg agctgcttgt aggagagcct gagccaaggg atgctcggaa aattgctcgc
     2641 tacttgctgc cagctggagg acctgctcac gatttttagt agacaaaagg tggatgtctg
     2701 tcacctgagg tttgccctct gtaatggtcc cagtcttgtc gaagacaatg gtgttcacac
     2761 cttgtagggt ttcaatagct tgaccagact tgaacagtag accattttcc gccccttttc
     2821 cagtcccaac catgatagcc gtaggggttg ccagacccag agcacaaggg caggcgatga
     2881 ccaagacggc gatgatgatg cttaatgaaa aaatccatga ttcttgaccc aagaagtacc
     2941 aggccagacc ggacaagaga gccaagccca tgacgactgg tacaaatatt gcagatactt
     3001 ggtcagccaa tttggcgatg ggagccttag aaccttgagc ctcttctacc aagcgaataa
     3061 tctgggccag agtcgtatca cgaccaacct tggtagcctg catggtaatg gcgccttgct
     3121 ggttaagggt gccgccaaaa acattatcgc ctagagcctt cttcactggt aggctctcac
     3181 ccgtcagcat agactcatcc acacgtgttt ggccttcgag aacctgacca tcaacaggaa
     3241 tctgctgacc tggacgaaca atgacctggt caccgaccac cacttcttca atcggcactt
     3301 gtatttcctg gccatttcgc aagacctggg ccgtcttggg agccagatcc atcaatttct
     3361 taatggcctc agaagtctga cctttggctc tagcttcaaa atattttcct agggtaatca
     3421 aggtcaatat aacggcagct gattcaaaat acagttctgg atggtgaccg tgcatggcca
     3481 cttctttccc catcaaaaga aacgcaatca tcaaaagacc ttgaaccaag gctgcccctg
     3541 tcccaacagc aatcaaggaa tccatattgg gatggccttg caagagagtt ttaaagcctt
     3601 tttggaaaaa actgcgtccg atatagagga cagggatgag caagatgact tgactgatcg
     3661 catagactag cggttggtgg agcagagctg gtaatggaag ccctccccaa ggcaacatcg
     3721 gccccatagc aatatagagc agtggaagag taaatgctgc tgaccagaca aatcgatgcc
     3781 acagcttttc ttccttgctc ggtcccttgt ccgcagcctc ttctacttct tctggtcgaa
     3841 tcagctgata acctgcttgc tcaactgccc tttcaagact agctggattt tgcctatcac
     3901 ggctataacg gatagtcgcc ttttctgttg ctagattgac agtgacctct tctacaccct
     3961 ctagtttgcc cagagctttt tcaaccgtca tggcacagga agcacaggtc atgcctgaaa
     4021 tatcataaga ctcggtcacc aaattatcga ctaactgata acccgccttt tcaactgcct
     4081 gacgaatatc ctctagtccc aaaagctttt catcatagct aacactcaat ttttcagtcg
     4141 ctaggttgac actagcttct tccattcctg ctaatttacc aaccgctttc tcaaccgtca
     4201 tagcacagga agcgcaggtc ataccttgaa tgggatagct tgcttgtttc ataggttact
     4261 ccttttccga ctacatctgt aaacaaatta tacaacatac gactacattt gtaaacaaaa
     4321 ttgtttcaaa aaagt
//
LOCUS       DBNFCX010000133         4307 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.133, whole genome shotgun sequence.
ACCESSION   DBNFCX010000133 DBNFCX010000000
VERSION     DBNFCX010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 4307)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4307)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4307
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.133"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..311
                     /locus_tag="AC1PJC_002085"
     CDS             <1..311
                     /locus_tag="AC1PJC_002085"
                     /inference="COORDINATES: protein motif:HMM:NF012235.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIP6621056.1"
                     /translation="NSHTTKFDFNKFLGLHHNYQVNSRGKNLSLGQQQRLLILRAMVQ
                     KNKQVFVFDEPTSNLDEQSRKEFIQMLFELKESGKIICIISHDKDLQSIATDTICLSK
                     "
     gene            complement(489..1214)
                     /locus_tag="AC1PJC_002086"
     CDS             complement(489..1214)
                     /locus_tag="AC1PJC_002086"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621057.1"
                     /translation="MKKVSLSPFAWSAIYLTVSWLIFFFQVPFFNKLIQGLFQLDIEN
                     ISNLIQDQLVEGWVRRAIMLLLVMFLICLVECVLFYFLTGKLIKTFKKLEGKANQLIL
                     WGYRLLFWGSIGLIIFGLVTSLSTGLDLWRNIQALQELDFQAIGADIQALIAETPLTK
                     IGDGQALFDIIQDYIRDNSLLLASKESLVIQVSKLHSLISVWSTAYPVLLALLSYFHI
                     KDWWTKRTPGKPIVKISLTIERQ"
     gene            complement(1305..2186)
                     /locus_tag="AC1PJC_002087"
     CDS             complement(1305..2186)
                     /locus_tag="AC1PJC_002087"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621058.1"
                     /translation="MKLLSLFILRLRRNAIFLSLITAIALIPLALTYRNVLEAENLRF
                     EDRARITQVKKETEMALYSDHNEAQALDQESMDYYKKLLELATTYLEKEHIQGKSQEV
                     LETELELYQTLQNWEAKGNRVNHFTSSELAESITVYKKVLKQALTFHYSTAPKDVYLN
                     LLQVLPASIYMIPLVICCLLAWLLMTDLSKHRGLLFINGLSPGQYATNLTLLALLLQV
                     AIYALILFMLLLLAHQFQFTFQEDYPLLVGTKTLSTISIREQLQKLLLVMAGVTGFYL
                     TFIRLATAKVLQTYKRK"
     gene            complement(2199..3059)
                     /locus_tag="AC1PJC_002088"
     CDS             complement(2199..3059)
                     /locus_tag="AC1PJC_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6621059.1"
                     /translation="MRLSIHNLCKSYGKKKILDQLNLELVEPGIWALIGPNGSGKTTL
                     LDCIANLQTVDSGKIAINGKKHDNPNVYQTFAYLQDNRVLYPELTGLEHLRLVQTIQG
                     LPKERIEEVIQEIGIRDYVKIPVKNYSLGMKQHLLLAIGIMNKPQVMLLDEPLNGLDP
                     TSYIQTRKLLQKLAKNGSTIIVSSHQLNEVDQLTDQLLFLKQGKIIERKLEQVGRQYA
                     VQTSDNQTVFQKLRQVNGLTLVNDNIQVDTSVHSLHFYLDQVMTCQVEILDITLQEHQ
                     SEEIYKELFE"
     gene            complement(3062..4279)
                     /locus_tag="AC1PJC_002089"
     CDS             complement(3062..4279)
                     /locus_tag="AC1PJC_002089"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621060.1"
                     /translation="MFQIEGKLFFRSKKNLFAILVMLMTILSSSLLAGYHNRQAKLKV
                     IQHYEQSIQNFENIIQDLETQYQNQTLIQEDYQAEKDFFTDYIANYQKEIEAVKKEDW
                     TYFYEKNIQHYQQDGQYISHSYRSYEFTPQTIENTFLISKYLLEKEIPSAFPTELYLT
                     AFENPKTPTDREIVKSLGQQALKGTSHEIWQGQKQLGLVITLPLFLLAFTNFFIKDQQ
                     GTSRQIRLLQTLGLTRIRITTNKYLAFLTLYTALFLTIYLSQFLIAFLLNGNSSWIYP
                     VTTYSSKGLAYSFITTTIKPIYQVILLACGMHYLYLLFLLGVAQTLTRVLKNGLAGLV
                     ITLGLVISANFFPHIFNPFSLWNAGNLADGSAIIYHQLTGYSIPKVFTVLLISNLLIY
                     CLQFYLLTRKSEV"
BASE COUNT         1199 a          798 c         1008 g         1302 t
ORIGIN      
        1 caaattctca tacgactaaa tttgatttca ataaatttct aggattacac cataattatc
       61 aagtaaattc tcgagggaaa aatttgtctt tgggtcagca acaacgatta ttgatactga
      121 gagccatggt tcaaaaaaat aagcaggttt ttgtatttga tgagccaact agtaatttgg
      181 atgagcaatc tagaaaagaa tttatacaga tgctatttga attaaaagaa tcaggaaaaa
      241 taatttgtat catttcacat gacaaggatt tacagtcaat tgcaacagat actatatgtc
      301 taagtaagta gtatttgatt gtatttgtac aaactcatcc agttctacgt agaatacctg
      361 gacaatgtca acgaacaccc agactatgat gcggctttag aggctgttaa ataaaagaat
      421 atagcggtgc cggaacaggc atcgtttttt gcattcaaaa agccacccta ttcagagtgg
      481 ctatacattt actgacgctc aatggtcaga ctgattttga cgatcggttt tcctggagtc
      541 cgcttagtcc accagtcttt gatgtggaaa tagctgagca gggcaagtag gactggatag
      601 gcagttgacc agacactgat aagcgagtgg agttttgata cctggataac cagtgactcc
      661 ttgcttgcta gcaagaggct attgtcacga atgtagtctt gaatgatgtc aaacaaggct
      721 tgcccatcac cgattttagt cagaggagtt tcagctatca gagcctgaat gtctgcccca
      781 atcgcctgaa aatccagttc ttgcagggct tggatatttc tccataagtc cagaccagtt
      841 gaaaggctag tcaccaaacc aaagataatc aatcctattg atccccagaa caagaggcgg
      901 tagccccaaa gaatcaactg gttggccttg ccttccagtt ttttgaaggt cttgatgagc
      961 ttaccagtca agaagtaaaa gagtacgcat tcaaccagac agatgaggaa cataacaagt
     1021 agaagcatta tagctcgtcg cacccagcct tctaccagct ggtcttgaat cagattgctg
     1081 atgttttcta tgtccagttg gaagaggcct tggatcagct tgttaaaaaa tggtacttgg
     1141 aagaagaaaa tcagccaaga tactgtcaga tagattgcac tccaagcaaa tggagataga
     1201 gatacttttt tcactttttc ttgcctttct tatgctaacg tttgcacatc aaggcattgt
     1261 accatatgtt cagttttaag tctagtgact ggtttgtttt cagcttattt tcgcttgtat
     1321 gtttgtagga ctttagcagt tgctaatcgg ataaaggtca gatagaaacc tgtcacacca
     1381 gccattacca gcaggagttt ctgtaattgt tccctgatag atatggtaga tagagtcttt
     1441 gtaccgacta gtagaggata gtcttcttgg aaggtaaatt ggaactgatg tgccaataga
     1501 agtagcatga acaggatgag agcatagata gcaacttgga ggagaagagc aagtaaggtc
     1561 aggttagtgg catattgacc aggggatagt ccgttgataa agaggaggcc acgatgtttg
     1621 gaaaggtcgg tcatgaggag ccaagctaag agacagcaga tgacgagagg aatcatatag
     1681 atactagctg gaagaacttg taacaagttc agataaacat ccttgggagc agtagagtag
     1741 tgaaaagtaa gagcttgctt tagaactttt ttatagactg tgatactttc tgccagttcg
     1801 ctgctcgtaa aatgattgac tctatttccc tttgcctccc agttttgcaa ggtctggtag
     1861 agttctaact ccgtttccaa tacctcctga cttttgcctt ggatatgttc cttttctaag
     1921 taggtggtcg ccagttccaa gagtttttta taataatcca tgctttcctg gtctaaggct
     1981 tgggcttcat tatggtcaga gtacaaggcc atttcagttt cttttttgac ttgtgtgata
     2041 cgggctcgat cctcaaatcg caggttttcg gcctctagga cattccgata ggtcagggca
     2101 agtgggataa gggcgatagc ggttatcagg gatagaaaaa tagcattgcg tctcagtcgt
     2161 aggatgaaaa gggacagtag tttcatgttc agacctccct attcaaatag ttctttataa
     2221 atctcttcgg actggtgttc ctgaagtgta atatccagaa tttccacctg acacgtcatg
     2281 acttggtcta ggtagaaatg cagactatga acgctggtat ctacctgaat gttatcattg
     2341 accaaagtca atccatttac ttgtctaagt ttctgaaaaa ctgtctgatt gtcactagtc
     2401 tgaacggcat attgtcgccc aacctgttcc agttttcgct cgatgatttt tccttgtttg
     2461 agaaagagca gttggtcggt tagttgatcc acctcgttta attggtggga agacacgata
     2521 atggttgacc cattcttggc tagtttctgg agcaattttc tggtctgaat gtagctggtc
     2581 gggtccaagc cgttcaaggg ttcatccaag agcatgacct ggggcttgtt cataataccg
     2641 atagccagta ggagatgttg tttcattccc agggaataat ttttgacagg gatctttaca
     2701 taatcacgga taccgatttc ttggatgact tcctcaatcc gctctttggg taaaccttgg
     2761 atagtttgga ccaatcgcaa atgctccagt ccagtcaatt cagggtagag gacacggttg
     2821 tcctgcaggt aggcaaaggt ttggtagaca tttggattat cgtgcttttt gccatttatt
     2881 gcaatctttc ccgaatcaac ggtttgcagg ttggcaatgc agtctaggag ggttgtcttt
     2941 ccagaaccgt ttggtccaat caaggcccag attccaggct ccaccagttc taggtttagc
     3001 tggtccagta ttttcttttt cccgtaggat ttgcacaaat tgtgaatgga taatcgcatg
     3061 gttagacctc actttttctt gtcaggagat agaattgcag gcaatagatg agcaggttac
     3121 tgatgagaag gactgtaaaa acttttggaa tactgtatcc tgttaattga tggtagatga
     3181 tagcacttcc gtccgccaga ttgcctgcat tccataggct aaatggattg aagatatggg
     3241 gaaagaagtt ggcagagatg acaagtccca gtgtgataac cagtcctgcc agtccatttt
     3301 ttaatactct agtcaaggtc tgtgccactc ccagcaaaaa tagaaggtag agatagtgca
     3361 tgccacaggc tagcaagatg acttggtaaa taggttttat ggttgtggtg ataaaactgt
     3421 aagccagtcc cttactgcta taggtggtga cgggatagat ccagctacta tttccattca
     3481 gtaaaaaagc gatgagaaac tggctcaaat agatagtgag aaagagggca gtatatagtg
     3541 ttaggaaggc taggtattta tttgttgtaa ttcggattct agttagccct agggtctgta
     3601 aaaggcgtat ctgtcggctg gttccctgct ggtccttgat gaaaaaattg gtgaaagcca
     3661 ggagaaagag gggaagggtg atgaccaggc ccagctgttt ttgaccctgc cagatttcat
     3721 gacttgttcc ctttaaagcc tgctggccca ggctcttgac gatttctcta tctgttggtg
     3781 ttttgggatt ctcaaaggct gttaggtaaa gctcagttgg aaaggctgag ggtatctcct
     3841 tctctagcag gtacttggaa atcaagaagg tattttcgat agtttgtggg gtaaattcat
     3901 agcttcgata ggaatggctg atgtattggc catcctgctg atagtgctgg atatttttct
     3961 cataaaaata ggtccagtcc tccttcttga ccgcctcaat ctccttttgg tagttggcaa
     4021 tatagtctgt aaagaagtcc ttttcagcct gataatcttc ttggatgaga gtttgattct
     4081 gatactgtgt ttctaaatct tgaatgatgt tttcaaaatt ttggatagac tgttcatagt
     4141 gttggatgac ctttaattta gcttgccgat tgtgataacc tgctagtaag gaactagaca
     4201 ggatagtcat cagcatgact aagatagcga acaagttttt cttgctacgg aaaaatagct
     4261 taccttcaat ttgaaacata cctccagggg agaaatggtg aagggat
//
LOCUS       DBNFCX010000134         4255 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.134, whole genome shotgun sequence.
ACCESSION   DBNFCX010000134 DBNFCX010000000
VERSION     DBNFCX010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 4255)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4255)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4255
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.134"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..1187
                     /locus_tag="AC1PJC_002090"
     CDS             <1..1187
                     /locus_tag="AC1PJC_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621061.1"
                     /translation="LQFLPDNSIHFNSDDFHQLVEEDILEEGNYLTLLSLLVQTSKAV
                     VNTDIILSYFTENQNYDDSLIKFINNASDLKFEKDVFKSYEKEEQRNFFTKTVECMEL
                     DDTKYELILSTLGWYYTNTFDKIGIESSKLRILIDLEIIQFNSKNIEFFRDNYPEDTL
                     YLIKKHLSEYLDTESKIDQEDELLALLDDDTISDDEKTDIADHVLKISIKNKQYSEKL
                     TAHILQNQFDEEDLSYIISSQFYDNHLLDLQELVRELAIENLDTIAEEHYAQISDNLM
                     RELIAEKQSDTLTELIYNYYVYTVNLDENEKREQFSRYLHLFTLSENITALKKLNVFD
                     EWDRVLKTLNKPGTRWGQVQKTTINLAFARYLKSRKLVSSITEQSNGIRLNSYKDKTI
                     PL"
     gene            1245..2336
                     /locus_tag="AC1PJC_002091"
     CDS             1245..2336
                     /locus_tag="AC1PJC_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HIP6621062.1"
                     /translation="MSISGIVAEYNPFHTGHKYLLEQAEGLKIVVMSGNFMQRGEPAI
                     LDKWTRAQMALEHGADLVVEMPFLVSVQSADHFAKGAISILHRLGVEKLVFGTEEMLD
                     YQKIADIYVDKSEEMENFVKNLPDNLSYPQKTQAMWQEFAGLTFTGDTPNHILGLAYA
                     KAVAGTGIQLGPVQRQGAGFHSEEVETTYASATAIRKGADQLDLVRDFLPSASLFEEA
                     TKVSWRNYFLLLRYQIATHRDLSQVFQVNEELASRIRSAIGSAATVEELVDAVATKRY
                     TKARVRRVLTYILVNAVEAPLPDAVHVLGFSARGQAYLKTVKERVDLVTRIGKDPWDS
                     LTQQADAVYRLGADAIAEQTYGRVPVRVE"
     gene            2415..3143
                     /locus_tag="AC1PJC_002092"
     CDS             2415..3143
                     /locus_tag="AC1PJC_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HIP6621063.1"
                     /translation="MNENWTVKQVSHLTGLTVRTLHHYDQIGLLKPAFVAENGYRYYN
                     QENLARLQEILLFRELDFPLKDIQQLLDVTEVNRQQVLRDHITLLELKRERLDRIINH
                     ARLLTEKGGEVMDFHAFDSSQLEAYKVEAKERWGNTAAYAEFEERYDASKDRVFAQEM
                     QAIFEAFGKMQSLGAVHPDVQAQVANLQAYITENFYTCTKEILQNLGLMYVEDERFSA
                     NIDRAGGPGTAAFVSQAIAVYCKE"
     gene            3202..>4255
                     /locus_tag="AC1PJC_002093"
     CDS             3202..>4255
                     /locus_tag="AC1PJC_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-loop NTPase fold protein"
                     /protein_id="HIP6621064.1"
                     /translation="MEEKNYKKLKDLCTIPVRRVDWSGERWFVRRYKQVLALAWIVYF
                     LLREELVKEILRPVGDYLLDFPWIQWPYVNRLTILLAFTFLLFLAKIIFNILRWLNVI
                     RYFPLGKKKYPEYDFPFQEELVSFLNRKEERGRNIFWLDGSWGSGKTHFIRTFFENQL
                     YKPREIYYISCFGIRTREQAEKALIEEIEQHSTFGSLDHIPVISSLVKWSYKLLGLDL
                     MKKYSLIIFDDLERVAYSEKQKDKPEDFNDLLGFIDYLANHRNQKVLVLMNKEDMENT
                     YQQIIEGKFKPTVTNIPDQDKIIELVVERYCDESFVRDFLIELFKLLSCWNSVNLREI
                     QNSIEQFRFDFNQNDSY"
BASE COUNT         1312 a          745 c         1000 g         1198 t
ORIGIN      
        1 tcctacagtt ccttccggat aatagtatac atttcaatag cgatgatttt catcaacttg
       61 tagaagagga tattcttgaa gaggggaatt atcttacctt gctaagttta ctagttcaaa
      121 cttctaaagc tgtagtgaat accgatatta tcttatctta ttttacagag aaccaaaatt
      181 atgatgatag tcttatcaag tttatcaata atgcaagtga tttaaaattt gagaaagatg
      241 tgtttaagtc atatgagaag gaagagcaaa gaaacttttt caccaaaact gtcgaatgta
      301 tggagttaga tgacaccaaa tatgaactca tacttagcac acttggttgg tactatacca
      361 atacatttga taagattggg atagaatcaa gtaagcttag aatattaatt gatttggaaa
      421 ttattcagtt taattctaag aacattgaat ttttcagaga taattatcca gaggatacac
      481 tatacctaat caagaaacac ttatcggagt atctagatac tgaaagtaaa atagatcagg
      541 aagatgagct gctagcattg cttgatgatg acactatttc ggatgatgag aaaactgaca
      601 ttgcagacca tgttttaaaa attagtataa aaaataaaca gtattcagaa aaattgactg
      661 ctcatatttt gcaaaatcaa tttgatgaag aggatttgag ttacatcatc agcagtcaat
      721 tctatgataa tcatttattg gacttgcaag aacttgttag agaacttgcg attgaaaatc
      781 ttgatactat agctgaggag cattatgctc aaatcagcga taatttaatg agagaactaa
      841 tcgctgaaaa acaatcagat acattaacgg aattaattta taattactat gtatatacag
      901 ttaatttgga tgagaatgag aagcgagaac agttttctag gtatttgcat ttatttactc
      961 tttcagaaaa tattacagcc ttgaagaaac tcaatgtatt tgatgagtgg gatagggtat
     1021 tgaaaacatt aaataaacca gggactagat ggggacaagt gcaaaaaaca acaataaact
     1081 tggcatttgc aagatactta aagagtagga aattagtaag ctcaattacg gaacaaagta
     1141 acggaatccg cttaaatagc tacaaggata aaactatacc tttgtagacc tatgttagac
     1201 tatgatagag ttgtcgaatt aaatacaaaa aataggagaa atgcatgtct atttctggta
     1261 tcgtagcaga atacaatccc tttcatacag ggcataaata cctgctggaa caggcggaag
     1321 gtctgaaaat cgtagttatg tctggcaatt ttatgcaacg gggtgagcca gccattctgg
     1381 ataagtggac acgggctcag atggctttgg aacatggggc agatcttgtt gttgagatgc
     1441 cctttttagt gtcggtccag tcggctgacc attttgccaa gggagccatc agcattttac
     1501 acaggctagg tgtggaaaaa ctggttttcg gtacggaaga aatgctggat taccagaaaa
     1561 ttgcggatat ttatgtggat aagtcggaag agatggaaaa ttttgtgaaa aacttgccag
     1621 acaatctctc ttatccacag aagacccagg ccatgtggca ggagtttgct gggctgacct
     1681 tcacgggtga tacgccaaac catattctgg gcttggctta cgctaaggcg gtggctggga
     1741 caggcattca gctcggtcct gttcagcggc agggggctgg ttttcactcg gaagaggtgg
     1801 aaacgaccta cgcctcggcg acggctatcc gaaagggtgc tgaccagttg gacttggtgc
     1861 gtgacttttt accgtctgcc agtctctttg aagaggcgac caaggtaagc tggagaaatt
     1921 attttctcct gctccgctac cagattgcga cccaccgaga tctcagtcag gtctttcagg
     1981 taaacgaaga actagccagt cgtatccgct ctgccattgg gagcgcagcg accgtggagg
     2041 agttagtgga tgccgttgcg accaagcgct acaccaaggc gcgggtgcgg cgggtgctga
     2101 cctacatcct ggtcaatgcg gtggaagctc ccttgccaga tgcggtccat gtcctaggct
     2161 tttcggctcg aggccaggcc tatctcaaga ccgtcaagga gcgggtggac ttggtgactc
     2221 gaatcggaaa agatccctgg gacagcctga cccagcaggc agatgcggtt tatcggttgg
     2281 gggctgacgc aatagcagag cagacctacg ggcgcgtgcc ggtgagggtg gagtgagatg
     2341 taaaagtttt ttgataaaat tcttgactct caccttacgt tatcccttat actgggcata
     2401 gagaggagat ttctatgaac gaaaattgga cagttaagca ggtcagtcac ttgacaggat
     2461 tgacggtgag gaccttgcac cactatgacc agattggttt gctcaaacca gcatttgtgg
     2521 ctgaaaatgg ttatcgctac tataatcagg agaatttggc tcgtctgcaa gaaattctat
     2581 tgtttcggga attggatttt cctctcaaag atattcagca gcttctagac gtgacggaag
     2641 ttaatcgtca gcaggtcttg cgggaccata tcaccctttt agagctcaaa agggaacggc
     2701 tggatcgcat catcaatcac gccagattgc tcacagaaaa aggaggagaa gtcatggatt
     2761 ttcacgcatt tgacagcagt caactagaag cctacaaggt ggaggccaag gagcggtggg
     2821 ggaataccgc ggcctatgcc gagtttgaag agcgctacga tgctagcaaa gaccgggtgt
     2881 ttgcccaaga gatgcaggct atttttgaag cttttggaaa aatgcagagc ttgggagccg
     2941 ttcatccaga tgtgcaggct caggtagcca acttgcaggc ctatatcacg gaaaatttct
     3001 acacctgcac caaggaaatc ttacaaaatc taggtcttat gtatgttgaa gacgagcgat
     3061 tttcggccaa tatcgaccga gcaggtggac caggaacagc agcctttgtc agtcaggcaa
     3121 tagcagttta ttgcaaagaa taaacgaaag aagtctagtg agaactaggc ttttttggta
     3181 tactgggatg aggaggaaga tatggaagag aaaaattata agaagctaaa agacctctgt
     3241 acaatacctg tacgacgagt agattggagc ggagagagat ggtttgtccg aagatataag
     3301 caagttttgg ctttggcgtg gattgtctat tttcttttgc gagaagagtt agtgaaggaa
     3361 attctcagac cagtgggtga ttatctgttg gattttccct ggatacaatg gccatatgtg
     3421 aatagattga ctattttgtt agctttcact ttcctgcttt tccttgcgaa gattattttt
     3481 aacatcttgc gatggcttaa tgttatccgt tattttccac taggtaagaa aaaataccct
     3541 gaatatgact tcccttttca agaggaactg gtttctttct tgaatcgaaa ggaagaacga
     3601 ggtaggaata tcttttggtt agatggttcg tggggaagtg ggaaaaccca ctttattcgc
     3661 acattctttg aaaatcaact ttacaaaccg cgtgagattt attatatctc ctgttttggc
     3721 attcggacca gggaacaggc ggagaaggca ttgattgaag agattgagca acattcgacc
     3781 tttggaagtt tagaccatat tccagttatc agcagtcttg taaaatggtc ctataagctt
     3841 cttggtctag acttgatgaa aaagtattct cttattatct ttgacgattt ggaacgggtt
     3901 gcttatagtg aaaagcaaaa agataaacct gaagacttta atgatctttt aggctttata
     3961 gattatctcg caaaccaccg caatcaaaaa gtacttgtct tgatgaataa ggaagatatg
     4021 gaaaatactt atcaacagat tattgaaggg aaatttaaac caactgttac aaatatccca
     4081 gaccaagaca aaattattga acttgtagtg gaaagatatt gcgatgagtc atttgttaga
     4141 gattttttga tagaattatt caagctacta tcttgttgga attcggtcaa tttacgggaa
     4201 atacaaaact ctatagaaca atttcgattt gattttaacc agaatgattc ctatg
//
LOCUS       DBNFCX010000135         4176 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.136, whole genome shotgun sequence.
ACCESSION   DBNFCX010000135 DBNFCX010000000
VERSION     DBNFCX010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 4176)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4176)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4176
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.136"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            172..2127
                     /locus_tag="AC1PJC_002094"
     CDS             172..2127
                     /locus_tag="AC1PJC_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017769760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HIP6621065.1"
                     /translation="MPIKELSIDIETYCEIDLQKSGVYRYAEDDSFEPLLFAVSVDNG
                     PVTVYDFNKEKLPQDILEALVDDSIIKWAFNASFERICLSNWLKKYHPDLLSDGFLSP
                     VSWRCSMIWSAYLGLPLSLEGVGTVLKLKDQKMREGADLIRYFCLPCKPTKVNGGRIR
                     NFPHHAPNKWSTFIDYNRRDVEVELAIKERVKNFPVPSFVWNEYHQDQIINDRGIGID
                     IDFVKAAINIDAKSKAKIQAELKALTGLENPNSVLQMIGWLREHGVTTDSIDKKAVKE
                     LLKTVDETTAQVLKLRQQAAKSSVSKYQAMMNCVCKDGRARGMFQFYGANRTGRWAGR
                     LVQLQNLPQNHLPDLEEARELFRTGDLESTELLYDTQDTLSQLIRTAFVPSEGKKFIV
                     CDFSAIEARVLSHLAGERWRSKVFEQGKDIYCMSAAQMFGVPVEKHGQNSELRQKGKI
                     AELACGYGGSVGALKAMGALDRGLSEEELQPLVDSWRQANPNIVLFWWDVDRAVKSAI
                     KEQIQTETHGIQFEGSKGMLFITLPSGRKLAYVKPKMGENQFGGESVTYEGTGTAKRW
                     EKLESYGPKFVENIVQAISRDILAYSINQLKSFQVVGHVHDEVIIECPIEQKLDEIAS
                     LMGIAPDWMSDINLRADGYECLFYQKD"
     gene            complement(2168..2773)
                     /locus_tag="AC1PJC_002095"
     CDS             complement(2168..2773)
                     /locus_tag="AC1PJC_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015057845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621066.1"
                     /translation="MAKNEQNRNSKYTPESYRDEKPYNDIPCEEGEVLVPIVVMNNDM
                     IKAMGINRSNMKTARMKNGSRVPVAYAPVKLEHFDNALKIYYKDVNIYLNQFKSDSDV
                     LSLEEMMENMNNENKKGNDPTGISSHEEQLMLIETLEVLIDVVYQRNEKYGKILKLIY
                     HDFTISKQEIIDKLGMKKTQGYDAIKKAHALAKEVYKELNQ"
     gene            3145..4092
                     /locus_tag="AC1PJC_002096"
     CDS             3145..4092
                     /locus_tag="AC1PJC_002096"
                     /inference="COORDINATES: protein motif:HMM:NF042538.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-three component system protein"
                     /protein_id="HIP6621067.1"
                     /translation="MQFAEFLNLLYVNIGGEMSRSEFLNTLIENSIENPDDNPLSNLA
                     PDTINRYFIPSGNTIAKIKANKLIKVIQLSALTTHIENQLTVDTIDRLADTLHQYGFY
                     SDDSELEISEICAQLFLNFLQGKVGIQTSKKELPFVGEIEITKVRYENGKIVIGSQSL
                     QLPEKGPIPDSLIELEDVYSKQLLIAYSENDGHPKTEYYDIQNLPQKYKDHLHDQRVN
                     FFNADYVLRVIRDGFKDSEQQIAILKQETYDSISDFLFEDYTTSFKKVTETLKHITTV
                     SFSKPEITQIQNFIGNSEKKGLCHTLVNDGKFNWVDVNE"
BASE COUNT         1350 a          799 c          787 g         1240 t
ORIGIN      
        1 ttaatagcac tatactttgg atatatgacc attcgaaatg acattcgaaa tgaaatggaa
       61 cgaaaggcaa agcaaaataa agaaaaactt agccaaacac cactcagtca aaaaaacaaa
      121 tagaacttta ggtggcagta cttctgtcac ctttttcaga aaggacaaac tatgccgatt
      181 aaagaactta gcatcgacat tgaaacctat tgcgaaattg acctacaaaa atctggtgtc
      241 tatcgctatg cggaagatga cagttttgaa ccccttttgt ttgcagtatc tgttgataat
      301 ggaccagtga ctgtttacga ctttaataaa gagaagttac cacaagatat ccttgaggcc
      361 ttggtagacg atagtatcat caaatgggct ttcaacgctt catttgagcg aatttgtcta
      421 tcaaactggc tcaagaaata tcatcctgat ttgttgtcag atggatttct ctccccagtt
      481 tcatggcggt gtagcatgat ttggtccgca tatttaggac tcccactttc cttagaaggg
      541 gtcggaacag ttctcaaact caaagaccaa aagatgagag agggggctga cctcattcgc
      601 tacttctgct tgccttgtaa gccaaccaaa gtcaatgggg gacgaattcg taactttcct
      661 catcacgcac ctaacaagtg gtctacattt atcgactaca acagacgtga tgttgaggtc
      721 gaattggcca tcaaggaacg ggtgaaaaac ttcccagtac ctagctttgt ttggaatgag
      781 taccaccagg atcagattat caatgaccgt ggtattggca tagatattga ttttgtcaaa
      841 gctgctatca atattgatgc caagagcaaa gccaaaattc aagcagagtt aaaagcatta
      901 acgggtcttg aaaatcccaa ctctgttctg cagatgattg gctggctacg tgaacatgga
      961 gtaactacag attctataga caaaaaagct gtgaaagaat tactcaaaac ggttgatgaa
     1021 acaactgctc aagttcttaa acttcgacag caagctgcca aatcaagtgt ctctaagtac
     1081 caggctatga tgaactgtgt gtgtaaggat ggtagagcaa gggggatgtt ccaattttac
     1141 ggagcaaacc gaactggtcg atgggcaggc cgtttggtac agcttcagaa tttaccacag
     1201 aaccatcttc ctgaccttga ggaagctaga gaactattca gaacaggtga cttagaatct
     1261 actgaactgc tctacgatac tcaagatacc ctatcgcaac taatacgtac tgcttttgtt
     1321 ccaagtgaag gaaagaaatt cattgtttgc gacttttcag ctatcgaagc tcgtgtactc
     1381 tcccacttag ctggagagag atggcgcagt aaagtatttg aacaaggaaa agatatctac
     1441 tgtatgtccg ctgcccagat gtttggtgta ccagttgaaa aacatggaca aaattctgaa
     1501 ttgagacaaa aaggaaaaat tgcagagcta gcttgcggat atggaggttc agtcggtgca
     1561 ctcaaagcca tgggagcact tgatagggga ctatcagagg aagaactcca gcccctcgtc
     1621 gattcttggc gacaagccaa ccccaatatc gtactcttct ggtgggatgt cgatagggct
     1681 gtgaaatctg ccatcaaaga acaaatccaa actgaaactc atggtattca atttgaaggc
     1741 tccaagggaa tgttattcat tacactccct tctggaagaa aactcgccta tgtcaaacct
     1801 aaaatgggag agaaccaatt tggaggagaa tccgtcacat acgaaggaac tggaactgcc
     1861 aaacgctggg agaaacttga aagttacggc cctaagtttg tcgagaatat cgtccaagct
     1921 atcagtcgtg acatccttgc ctattctata aatcaactga aatcgttcca ggttgttggc
     1981 catgtccatg atgaagtaat aatcgaatgt cctattgaac agaaacttga tgagattgca
     2041 tcattaatgg gaattgcacc agactggatg tccgatatca atcttcgcgc cgacggatac
     2101 gaatgcttat tctatcagaa agattagcaa aaaatcgcca cctcacaact gagatggcga
     2161 ttttaaatta ttgatttagt tctttatata cctcctttgc gagtgcatgt gctttcttga
     2221 tggcatcata cccttgagtt tttttcatac caagtttatc aatgatttct tgtttgctta
     2281 tcgtgaaatc atggtaaatc agtttgagga ttttaccata tttttcgtta cgctggtata
     2341 caacatcaat caatacctct agtgtttcaa tgagcatcag ttgttcctca tgtgaagaga
     2401 ttccggttgg gtcatttccc tttttattct cattattcat attttccatc atctcttcta
     2461 aagataaaac atctgaatca cttttaaatt gatttagata gatattgaca tccttgtaat
     2521 atatcttcaa agcattatca aaatgttcaa gtttgactgg agcataagca actggtactc
     2581 gtgaaccgtt tttcatacga gcagttttca tatttgaacg attaataccc atcgctttaa
     2641 tcatatcgtt attcattact acgattggaa caagaacttc cccttcttca caaggaatat
     2701 cattgtaagg tttctcatca cgatagcttt ctggagtgta ttttgaattt cgattttgtt
     2761 cattttttgc catgtcttgt caccatttcc ttcgttcaca aaggaaatgg acatgccaaa
     2821 aaaactattt aattttgttt ctgaccacat cagcagttcc ttcgctaaat catggtcagt
     2881 cgacttcaca gactgaactg caattctcaa cttccacctt tgaagtcaaa ggccgtgatc
     2941 aagggcaagg tttcagttgg ggagtaactt tgtaaacgca ctcatttata aaattacaaa
     3001 acttttgttt tctgatataa ttattaataa gtaactccat aactagggag aggtttacat
     3061 tacaaagtat actttatttt caagttaaac ctcggatggt ttcggaggct ttcggataat
     3121 atcggaaaaa ggaggtgata ataagtgcaa tttgcagaat tcctcaattt gctatacgtc
     3181 aacataggtg gagagatgtc gagaagtgaa tttctcaata cactaattga gaattcaatt
     3241 gaaaatcctg atgataatcc cctctccaat ttggcgcccg atacaattaa tagatatttc
     3301 ataccatccg gtaatacaat agctaagatt aaagctaaca agcttatcaa agttattcag
     3361 ctctctgctc ttacaactca tatagaaaat cagttaacag tagacaccat tgatagacta
     3421 gctgatactt tacatcaata tgggttctat tcagatgatt ctgaactgga aatttctgaa
     3481 atttgtgctc aactttttct taatttctta caaggaaaag taggtattca aacttcaaaa
     3541 aaagaactgc catttgttgg tgaaattgaa attacaaaag tccgttatga aaatgggaaa
     3601 atagttatcg gctcacagtc tctacagtta ccagaaaagg gacctattcc tgattctcta
     3661 attgagttag aagatgttta cagtaagcaa cttttaattg catactctga aaatgatggt
     3721 catccaaaaa cagaatatta cgatatccag aatctccccc aaaagtacaa agatcactta
     3781 catgatcaaa gagttaattt cttcaatgcc gactatgtat tacgggtaat tagagacggc
     3841 tttaaagata gtgaacaaca aattgcaata ctaaagcaag aaacctatga ttcaattagt
     3901 gattttctgt ttgaagatta cacaacttca ttcaaaaaag ttactgagac actaaaacat
     3961 atcactacgg tttcattttc aaagcctgag ataacccaaa tccagaactt cattggtaac
     4021 tctgaaaaga aaggtctttg tcatacacta gtaaacgatg gcaaatttaa ctgggtagat
     4081 gttaatgaat aatatatttg atactacttc agaagtagct atgcaatgtt taattacaat
     4141 taattgccta aataaaaaaa gtctatctct tgatag
//
LOCUS       DBNFCX010000136         4022 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.137, whole genome shotgun sequence.
ACCESSION   DBNFCX010000136 DBNFCX010000000
VERSION     DBNFCX010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 4022)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4022)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4022
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.137"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(318..1160)
                     /locus_tag="AC1PJC_002097"
     CDS             complement(318..1160)
                     /locus_tag="AC1PJC_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF975 family protein"
                     /protein_id="HIP6621068.1"
                     /translation="MFTISNIRERARQTLNETPGIYQLAVIPVTISVIVQLISFSRNS
                     LAGVTAEELASPSYFISTSLFPIFYGLLLGLLHLSIICTIFHLIKGVKTSTSFKDVLM
                     IFNHKDFWKIFRTYILKSFLLFLWGLLFYLGIGLLIGAGTMITIIAASSQSLDPDALP
                     MEILAILGLMAMGGLLLMVLGIALYIPQFYAYSQVEYILFEQLEREEYTGAFSIIKSS
                     RKLMKGYKFKRFTLDLSFIGWFLLVIITFGLAGLYVWPYHYAAQMHFHEEILDDQAKK
                     MSYV"
     gene            1469..2611
                     /gene="tgt"
                     /locus_tag="AC1PJC_002098"
     CDS             1469..2611
                     /gene="tgt"
                     /locus_tag="AC1PJC_002098"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011184131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HIP6621069.1"
                     /translation="MTDVPIKYRLIKKEKHTGARLGEIITPHGTFPTPMFMPVGTQAT
                     VKTMSPEELKAMGSGIILSNTYHLWLRPGDELVARAGGLHKFMNWDQPILTDSGGFQV
                     YSLADSRNISEEGVTFKNHLNGSKMFLSPEKAISIQNNLGSDIMMSFDECPQFYQPYD
                     YVKKSIERTSRWAERGLKAHRRPHDQGLFGIVQGAGFEDLRRQSAHDLVSMDFPGYSI
                     GGLAVGETHDEMNAVLDFTTPLLPENKPRYLMGVGAPDSLIDGVIRGVDMFDCVLPTR
                     IARNGTCMTSRGRLVVKNAQFAEDFTPLDPECDCYTCKNYTRAYLRHLLKADETFGIR
                     LTSYHNLYFLINLMKNVRQAIMDDNLLEFRQDFMEKYGYGKNGRNF"
     gene            2982..>4022
                     /locus_tag="AC1PJC_002099"
     CDS             2982..>4022
                     /locus_tag="AC1PJC_002099"
                     /inference="COORDINATES: protein motif:HMM:TIGR01168.1"
                     /note="The YSIRK form of extended signal peptide directs
                     nascent proteins to the cross-wall site, while signal
                     peptides lacking YSIRK direct proteins instead to the cell
                     pole. A large fraction of YSIRK proteins are surface
                     proteins anchored by sortase-mediated processing of a
                     C-terminal LPXTG motif; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK-type signal peptide-containing protein"
                     /protein_id="HIP6621070.1"
                     /translation="MKRYKVELVRLTELDRRDIIGIQAFGLSRSAQKFRGDYIEHMFR
                     DQSKKMIKKQEYFSLRKFKRGLASVTVGATLFMAGAALETLVVPQAAVVYADVADYAI
                     NSTWELSDKITSGLQTPRDADLAFSSATATVVKKDGSNVAVHVAITPTNTDQTGSVYV
                     MQGNNQGVYSATANMFAGETAPATMPALAVMVQTPMSKAPEQSQELIDKLNFNGKVDQ
                     GFLTITFSEAVTNPIIDISGLGGLGQANSTTYARGSFNSTDLELLTEGVSLEAASSGA
                     NLAITPTKIAVVDRNTYNHSVVTENQHTGSGNTQSPRLAPAGAGSIRVIGTTKEVKFK
                     LAHVSTPFSSFSK"
BASE COUNT         1309 a          714 c          848 g         1151 t
ORIGIN      
        1 gggaagacga actcttttta gactggtcga gttctttctc gctccctttt tcatcgaaaa
       61 agcagttcaa tgaaccattg aactgccgga tgactctaag gaggagcact tagaattgga
      121 acaaattact acacatggcg taaaaaatag aaaggaagaa atctgctcca ataccaagca
      181 ggctaaaata gtcctttgtc gctcctcagt tatagtataa cacaatccaa atgtttgtac
      241 caattattac tatatttttt tcttaaatat cgacacaaaa gtgtatataa aaataagagc
      301 agatatcgct cttattttta tacataactc attttcttag cctgatcatc taaaatttct
      361 tcatggaagt gcatttgcgc agcatagtga tacggccata catataaacc agccaggcca
      421 aatgtaataa tgacaagaag gaaccagcca atgaaggata aatcaagtgt aaagcgttta
      481 aacttgtaac ctttcatcaa ctttcgacta gatttaatga ttgaaaaggc acctgtatat
      541 tcttcgcgtt ccaattgttc aaacaagata tattctacct gtgaataagc atagaattgt
      601 ggaatataaa gagcaattcc taaaaccata agtaggagac ctcccatggc cattagccct
      661 agtatggcaa ggatttccat aggaagtgca tcagggtcta aggattgact ggatgcagct
      721 atgattgtaa tcatcgttcc agccccgata agtaaaccaa taccaaggta aaacagtagt
      781 ccccaaagga agagcaagaa actttttaaa atgtaggttc gaaagatttt ccagaaatct
      841 ttatgattga aaatcatcag cacatcttta aatgatgtgg aagtttttac ccctttgata
      901 agatgaaata tagtgcatat aatggataag tgcagtagtc ctaatagcaa tccgtaaaat
      961 attggaaaca aggaggtaga aataaagtag ctaggactgg caagttcctc agctgttact
     1021 ccagcaaggc tattgcgaga gaaagaaatt aactgaacga taacagaaat agtgacgggg
     1081 atgacagcca attgatagat accaggtgtc tcatttagtg tttgacgagc ccgctcacgt
     1141 atattagaaa ttgtaaacat ctacataacc tccttaccca acattgtaac ataattctag
     1201 atgacaagct aggctttttt tgatagactg gaaggtgctg tgggaatttg tcagtttgtt
     1261 gtgatgcgcc tgtctattta ctattaacta agtagaagat aaggcaaata tcgctgaaat
     1321 aagaagacat tctgatggat tagaccatgc aagattgaga aactgtattt acaggtaaag
     1381 tacttttatg tatgatatga aagagctgaa ctgtgaatcc agaactaata tcctaggact
     1441 gtttttccta gcgggaggta aatataacat gacagatgtt ccaatcaagt atcgcttgat
     1501 taagaaagaa aagcacacag gtgcacgttt gggcgaaatt attaccccac acgggacctt
     1561 tccaactccg atgtttatgc cagttggaac tcaggcaacg gtaaaaacca tgtcgcctga
     1621 agaattgaag gcgatgggtt caggaattat cctatctaat acctatcatt tgtggcttcg
     1681 tccaggtgac gaattggtgg cgcgtgcagg tggtttgcac aagtttatga attgggatca
     1741 accgattttg actgactcag gtggtttcca ggtttattct ttggcggata gtcgcaatat
     1801 ctcagaagaa ggtgtgacct tcaaaaacca tctcaatggg agtaagatgt tcctgtcacc
     1861 tgaaaaagct atctctattc agaacaatct tggctctgac attatgatga gctttgatga
     1921 gtgtccgcag ttctaccagc cttatgacta tgtaaaaaaa tccattgaaa gaacgagccg
     1981 ttgggcagaa cgtggtctca aggctcaccg ccgtccgcat gaccaaggtt tatttggtat
     2041 tgtccaaggt gctggttttg aagatcttcg tcgccaatca gcccatgatt tggttagcat
     2101 ggattttcca ggatactcta ttggaggatt ggctgttggt gaaacacacg atgaaatgaa
     2161 tgctgtactg gacttcacga cccctctttt accggagaat aaaccacgct atctcatggg
     2221 tgttggagca ccagatagct tgattgatgg cgtgattcgt ggggttgata tgtttgactg
     2281 tgtattacca acacgtattg cgcgtaatgg aacctgtatg accagtcgtg gacgtcttgt
     2341 ggtgaaaaat gctcagttcg ctgaggactt tacaccgtta gatccagagt gcgattgcta
     2401 cacatgtaaa aactatacac gtgcgtatct ccgccattta cttaaggccg acgagacgtt
     2461 tggtattcgt ttgacaagtt atcacaacct ctacttcttg attaatttga tgaaaaatgt
     2521 ccgtcaagca atcatggatg acaacctttt ggaattccgt caagacttta tggaaaaata
     2581 cggttacgga aaaaacggac gtaattttta atgctattag aactccctac tattttgtag
     2641 ggagtttgtt ttattcaata gatgattttt atctgttttt tgtgtaaata acgatgttcg
     2701 gattttatat aaccacagtc tagttttaac caaaataaag atgattgtag aaagaggatt
     2761 gaatacttaa agaacagcta tgttttgact atttacccta tcgaattgac tatgtacccg
     2821 aaaatagaag aaaaatttaa ttttttatca ataaatattg ttttatctat aagaaagagg
     2881 atagagatgg tataaataaa aaaacgaata aaaatcaagt taaaaagatt taaagttcga
     2941 taaaacagca attgctatgc tgtatttgta taaaaaatgt aatgaaacga tataaggttg
     3001 agctagttag attgacggaa ttagacagaa gagatataat cggaattcag gcattcggtt
     3061 tgagtaggag tgcccaaaaa tttagaggag attacataga acatatgttt agagatcaat
     3121 caaagaagat gatcaagaaa caggagtatt tctcattgcg caaatttaag cgtggattag
     3181 cttctgttac tgtaggtgca accctgttta tggcaggtgc agcactggag acgcttgtgg
     3241 taccacaagc agcggtggta tatgcagatg tggcagacta tgctataaat tcaacatggg
     3301 aattgagtga taaaataaca agcggtcttc aaacaccacg agatgcagat ttggcatttt
     3361 caagtgctac agcgacggtt gttaagaaag acggctcaaa tgtagcagtt catgttgcaa
     3421 tcactccaac aaatacagac caaacaggta gtgtatatgt aatgcaagga aacaatcaag
     3481 gagtctatag cgccactgct aatatgtttg caggagagac ggcaccggct actatgcctg
     3541 ccttagctgt aatggttcag acaccaatgt ctaaagctcc tgagcaaagc caagagctaa
     3601 ttgataaact taactttaat ggtaaagttg accagggatt tttaacgatt acattcagtg
     3661 aagctgtaac aaatccgata attgatatct ctggcttagg tgggttaggt caggctaatt
     3721 caacaacata tgctcgtggt tcatttaact caacggatct tgaattattg accgaaggag
     3781 taagtttaga ggcggcaagt tcaggagcaa acctggcgat tactcctact aaaatagcag
     3841 ttgtcgatcg caatacgtat aatcactctg ttgttaccga gaatcaacac actggttcag
     3901 gaaatacaca atcaccacgt cttgcaccgg caggagcagg atcaatccga gttattggaa
     3961 cgacaaaaga ggtaaaattt aaacttgctc atgtgtctac tccattttct tcattttcga
     4021 aa
//
LOCUS       DBNFCX010000137         3825 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.138, whole genome shotgun sequence.
ACCESSION   DBNFCX010000137 DBNFCX010000000
VERSION     DBNFCX010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3825)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3825)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3825
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.138"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(150..2231)
                     /gene="fusA"
                     /locus_tag="AC1PJC_002100"
     CDS             complement(150..2231)
                     /gene="fusA"
                     /locus_tag="AC1PJC_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HIP6621071.1"
                     /translation="MAREFSLEKTRNIGIMAHVDAGKTTTTERILYYTGKIHKIGETH
                     EGASQMDWMEQEQERGITITSAATTAQWNNHRVNIIDTPGHVDFTIEVQRSLRVLDGA
                     VTVLDSQSGVEPQTETVWRQATEYGVPRIVFANKMDKIGADFLYSVSTLHERLQANAH
                     PIQLPIGSEDEFRGIIDLIKMKAEIYTNDLGTDILEEDIPAEYLEQAEEYREKLVEAV
                     AETDEELMMKYLEGEEITNEELKAAIRKATINVEFFPVLCGSAFKNKGVQLMLDAVID
                     YLPSPLDIPAIKGVNPDTDAEEERHASDEEPFAALAFKIMTDPFVGRLTFFRVYSGVL
                     NSGSYVLNTSKGKRERIGRILQMHANSRQEIETVYAGDIAAAVGLKDTTTGDSLTDEK
                     AKIILESIHVPEPVIQLMVEPKSKADQDKMGIALSKLAEEDPTFRVETNVETGETVIS
                     GMGELHLDVLVDRMRREFKVEANVGAPQVSYRETFRASTQARGFFKRQSGGKGQFGDV
                     WIEFTPNEEGKGFEFENAIVGGVVPREFIPAVEKGLVESMANGVLAGYPIVDVKAKLY
                     DGSYHDVDSSETAFKVAASLALKEAAKSAQPTILEPMMLVTITAPEDNLGDVMGHVTA
                     RRGRVDGMEARGNTQIVRAYVPLAEMFGYATVLRSATQGRGTFMMVFDHYEDVPKSVQ
                     DEIIKKNGGNA"
     gene            complement(2710..3180)
                     /gene="rpsG"
                     /locus_tag="AC1PJC_002101"
     CDS             complement(2710..3180)
                     /gene="rpsG"
                     /locus_tag="AC1PJC_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011285383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HIP6621072.1"
                     /translation="MSRKNQAPKREVLPDPLYNSKLVTRLINRVMLDGKRGTAASIVY
                     GAFDQIKEATGNDALEVFETAMENIMPVLEVRARRVGGSNYQVPVEVRPERRTTLGLR
                     WLVTIARNRGEHTMIDRLAKEIMDAANNTGAAVKKREDTHKMAEANRAFAHFRW"
     gene            complement(3197..3610)
                     /gene="rpsL"
                     /locus_tag="AC1PJC_002102"
     CDS             complement(3197..3610)
                     /gene="rpsL"
                     /locus_tag="AC1PJC_002102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001142328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HIP6621073.1"
                     /translation="MPTINQLVRKPRKSKVEKSKSPALNVGYNSRKKVQTNVSSPQKR
                     GVATRVGTMTPKKPNSALRKFARVRLSNLIEVTAYIPGIGHNLQEHSVVLLRGGRVKD
                     LPGVRYHIVRGALDTAGVNDRKQGRSKYGTKRPKG"
BASE COUNT         1031 a          835 c          787 g         1172 t
ORIGIN      
        1 taatgtggtc ttccaacaaa agataaaaag gtacaaaacc agtgtaaaca tataagctat
       61 gatatacaga acaagttttt tcacttgaaa ttccccacca aatttcaaac aagcaaaaaa
      121 aaggcagccg aagctgcctt ggttagcaat tatgcattgc caccgttttt cttaatgatt
      181 tcatcttgta cagattttgg tacatcttcg tagtggtcaa ataccatcat gaaagtaccg
      241 cgaccttgtg ttgctgaacg aagaacagtt gcgtaaccga acatttccgc aagtggcaca
      301 taagcacgaa cgatttgtgt gttaccacga gcttccatac catcaacgcg accacgacgt
      361 gcagtaacgt gacccataac gtcaccaagg ttatcttctg gtgcagtgat tgttacaagc
      421 atcattggct caaggatagt tggttgagct gatttagctg cttctttaag ggcaagagat
      481 gctgccactt tgaaggctgt ttcagatgag tcgacatcgt ggtatgaacc atcgtaaagc
      541 ttagctttaa cgtcaacgat tgggtaacca gcaagaacac cgttcgccat agattctacg
      601 agaccttttt caaccgctgg gatgaattca cgtggaacca caccaccgac gatagcattc
      661 tcgaactcga aacctttacc ttcttcgttt ggtgtgaatt cgatccaaac gtcaccgaat
      721 tgacctttac caccagactg gcgtttgaag aaaccacgag cttgagtaga agcgcggaat
      781 gtttcacggt atgatacttg aggagcacct acgtttgctt caaccttgaa ttcacgacgc
      841 atacggtcaa caaggacatc caagtgcaac tcacccatac cagagataac tgtttcacca
      901 gtttcaacgt ttgtttcaac gcggaatgtt ggatcttctt cagccaattt agaaagggca
      961 atacccatct tgtcttggtc agctttagac ttaggctcaa ccatcaattg gataactggt
     1021 tctggaacgt ggattgactc aaggatgatt tttgcttttt catctgtcaa tgagtcacca
     1081 gttgtagtat ctttcaaacc aaccgcagcg gcgatgtcac ctgcataaac agtttcaatt
     1141 tcttgacggc tgtttgcgtg catttgaagg atacgtccga tacgctcacg tttaccttta
     1201 gaagtgttca atacgtatga accgctgtta aggacacctg agtatacacg gaagaatgtc
     1261 aaacgaccta cgaatgggtc agtcataatc ttgaaggcaa gagctgcaaa tggctcttca
     1321 tctgatgcat gacgctcttc ttcagcatct gtatctgggt taacaccttt aatagcaggg
     1381 atgtcaagtg ggcttggaag gtagtcgata accgcatcaa gcatcaactg aacacctttg
     1441 tttttgaagg ctgaaccaca caatactggg aagaattcaa cgttgatagt tgctttacgg
     1501 atagcagctt tcaattcttc gtttgtgatt tcttcacctt caaggtattt catcatcaat
     1561 tcttcatcag tttcagcaac tgcttcaacc aatttttcac ggtattcttc agcttgctca
     1621 aggtactcag ctggaatatc ttcttcaaga atatctgtac caaggtcgtt agtatagatt
     1681 tcagctttca tcttgatcaa gtcgatgata ccacggaact catcttcaga accgattggc
     1741 aattggattg ggtgagcatt tgcttgaaga cgctcatgaa gtgtgcttac tgagtaaagg
     1801 aagtcagcac cgattttatc cattttgtta gcgaatacga tacgtggaac accgtattca
     1861 gttgcttgac gccatactgt ttcagtttgt ggctcaacac ctgattgtga gtcaagaacg
     1921 gttaccgcac catcaagaac gcgaagtgaa cgttgtactt cgattgtaaa gtccacgtgt
     1981 cctggtgtgt cgatgatgtt tacacggtgg ttgttccatt gagctgttgt cgcagcagat
     2041 gtgatagtga taccacgctc ttgctcttgc tccatccagt ccatttgcga tgcaccttcg
     2101 tgagtttcac cgattttgtg gattttacca gtgtagtaaa gaatacgctc agttgtcgtt
     2161 gttttacccg cgtcaacgtg cgccatgata ccgatattac gagttttttc taatgaaaat
     2221 tcgcgtgcca tgaggtttgt tctcctatat ttttagattt ctattctgat tataccatat
     2281 tttaagaaaa gcgagtgggc aaatcccacc cgcttaagtt cttactaatg gtgtgaagtg
     2341 gacgaggcaa gcctcaatcc gatttgtgat ggttgaacaa agttccttca tctaattaag
     2401 ttcagttaac ttccatatat ccaatgtaga actaaactcg aacggcctgc tgtcaacgaa
     2461 aaaagagacg caattgtttt ggcttttgcc aattacaagt gtggctacct ttaggtataa
     2521 atctcattga atgcaaaagc attctgcttc tatttcctat ttttcgtcgg caggcacgtt
     2581 ctctgtatct taattagttg agttcggact aaaaattctg gaaaaaagat aaatcttcct
     2641 tggaccttaa ggtccatcgt ctgatttcct atttttcctt gaattttctt aacgtcctca
     2701 catcctatct taccagcgga agtgtgcgaa tgcgcggttt gcttctgcca ttttgtgagt
     2761 atcttcacgt ttcttaacag ctgcacctgt gttgtttgct gcatccatga tttctttcgc
     2821 aaggcgatcg atcatagtgt gctcaccacg gttacgagcg attgttacca accaacgaag
     2881 accaagtgtt gtacgacgct ctggacgaac ctcaactggg acttggtagt tagaaccacc
     2941 gacacgacgt gcacgtactt caagtacagg catgatgttt tccattgctg tttcaaatac
     3001 ttcaagtgca tcgttaccag ttgcttcttt gatttgatca aaggcaccgt aaacgattga
     3061 tgcagcagta ccacgtttac cgtccaacat aacacggtta atcaaacgag ttaccaattt
     3121 tgagttatac aatggatctg gcaatacttc gcgcttaggc gcttgatttt tacgactcat
     3181 ttatatttcc cctttcttag ccttttggac gtttagtacc gtatttagaa cggccttgct
     3241 tacgatcgtt aacacctgca gtatcaagtg caccacgaac gatatggtaa cgtacccctg
     3301 gaaggtcttt tacacgtcca ccacgaagaa gaacaacgct gtgctcttgc aagttgtgac
     3361 cgatacctgg gatgtaagca gtaacctcga taaggttgct caaacgtaca cgagcaaatt
     3421 tacgaagggc tgagttaggt tttttaggtg tcattgttcc gacacgagtt gcaacaccgc
     3481 gtttttgtgg tgatgaaacg tttgtttgaa cttttttacg gctgttgtaa ccaacgttca
     3541 aagctggtga tttagatttt tctactttag acttacgtgg tttacgtacc aactggttaa
     3601 ttgtaggcat ctacattctc ctgtatatat tttttatttt tggtgatagg gcattggtga
     3661 caacccctat ctgtgtgtac ttttgcaaca tttgtcagca cgtccctgta cactcttgag
     3721 agaccaaaag taaaaagtac cgtctaatat agtaccacat cccaaaacca ttgtcaaata
     3781 gatatgtttg aaatttttaa gaaaaaaaca cagccaatta gctgt
//
LOCUS       DBNFCX010000138         3824 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.139, whole genome shotgun sequence.
ACCESSION   DBNFCX010000138 DBNFCX010000000
VERSION     DBNFCX010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3824)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3824)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3824
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.139"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..716
                     /locus_tag="AC1PJC_002103"
     CDS             <1..716
                     /locus_tag="AC1PJC_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004250524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HIP6621074.1"
                     /translation="YDNGEIIVPEDKNARLYRKIFLSEYKGQVVQNIWLDIPIVNPMA
                     KEQVDFSTQKPENLLKRIIECCTVENDIVLDYHLGSGTTAAVAHKMNRQYIGIEQMDY
                     IETVSVERLKKVIAGEQGGISKDVNWSGGGSFVYAELKNDAQDFKNAIFEATTTEELL
                     ELFELAKKSSFLSYRIDPKKLKKNEFEKFSLAEQKQILSEIIDNNNLYVNYSDIDDSD
                     FQISAEDKKLNHAFYGKEK"
     gene            720..3356
                     /locus_tag="AC1PJC_002104"
     CDS             720..3356
                     /locus_tag="AC1PJC_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004183149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HIP6621075.1"
                     /translation="MTFIYETYDTVSRSGFKDFRADLPDYLTKNLKHPLRPYQQEAIG
                     RYLHYKTDNNRVIPEQVLYNMATGSGKTLLMATIILEKYQQGERNFIFFVNNDNILTK
                     TKDNFLESASGKYLFAEKIVIDGQIVTVREVTDFSDSRDDSINIVFTTIQKLHQDLNT
                     PRENRLSYEQFKDISVVMLADEAHHLNAGLSKSEKDDNTSWTSTIETIQKTAKKSSIF
                     EFTATIDLTNQAIAQKYQNSLLFKYDLKEFRLDKYSKDVLFHLVDGDVNHRMLQAIII
                     SQYRKKIALKNGINLKPLVMFKSQKIAESQENLDAFLGLLDNLSLEDIQAQRELVLEM
                     DEKFSILKKAFSYFETVGISDTDLVAELQEDFRKERLLLVDGKNKNKDSLHLLNTLEQ
                     PSNEIRAIFAVDMLNEGWDVLNLFDIVRLYDTRDGKTMKNGFVPGKTTNTEKQLIGRG
                     ARYFPFVIGDNLEEKYIRKFDDNENNELRVIEQLHYHSANNPRYISELKQVLRESGIF
                     DDQNLEERELKLKESFKKTRTYTDGVVWMNRRLSYEQLLEQRQGSLFDTNFIPKSFEV
                     KLPTHGVRDIEAFDEAMYASESLEVINFKFGKVIGNNIVRAAINRNKKFTFDNLQRAF
                     VALGSVSAFIGMLADIDIRVESQYQMMSDLTPDDKLYITEKLLHHIEKDLIATEERFF
                     GSEKFEQYKIKDLFEDNILRKYTINHQSQAEFGLSQKNPAETQYFEDLDNLDWYAYDD
                     NFGTSEEKLLVRLIKDLMIELEEKWTDIYLLRNEKAVKIYSFDKGQAFEPDFLMFAND
                     KNTGNVSWQIFIEPKGSQFLDSDNTFKNSKEGWKQEFLCQISERDEARTLVDDDRYRI
                     VGLPFFNEAVSKDEVREELRIL"
     gene            3373..>3824
                     /locus_tag="AC1PJC_002105"
     CDS             3373..>3824
                     /locus_tag="AC1PJC_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000275945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HIP6621076.1"
                     /translation="MYISKIKLTNFKSFKGHHDIEFSKGVNFFVGNNNCGKTTIFKAV
                     EFIQSGKNKLDFITKGSESEDVAVEVEFKGADLNDIIHDEKLNLNKYSEYVIDNGDGT
                     YSLRVLRTSQKCDVIQGKKTVSLDLSKVRIYNPNSIEKEELKKFENPTG"
BASE COUNT         1289 a          626 c          814 g         1095 t
ORIGIN      
        1 tctatgataa cggggagata attgttcctg aggataaaaa tgctagatta tacagaaaga
       61 tatttctatc agagtataaa ggacaagttg tgcaaaatat atggctagac atcccgatag
      121 taaatccaat ggcgaaagag caagtagatt tttctacgca aaaacctgaa aatttattaa
      181 agagaattat tgagtgttgc acggttgaaa atgacattgt tcttgactac caccttggtt
      241 caggaacaac agccgctgtc gcccacaaga tgaatcgaca gtacattggt atcgaacaga
      301 tggattatat tgagacggtt tcggtggagc gactgaaaaa ggttatcgct ggtgaacaag
      361 gtggtatttc aaaagacgtt aactggtctg gtggtggtag ctttgtctat gctgaactga
      421 aaaatgacgc tcaagatttc aaaaatgcga tttttgaggc aacaacaacg gaagaattat
      481 tggaactttt tgagcttgcg aaaaaatctt ccttcttgtc ctaccgcatc gaccctaaaa
      541 agttgaaaaa gaatgagttt gaaaaatttt ccttggcgga acaaaagcaa atcttgtctg
      601 aaatcattga taacaataac ctctatgtga attattctga tattgatgat agtgattttc
      661 agatttcagc agaggataaa aagctcaatc acgctttcta cggaaaggaa aagtaagcca
      721 tgacctttat ttacgaaacc tatgatacag tcagtcggtc tggctttaag gattttcggg
      781 cagatctgcc agattacctc acgaaaaact tgaagcaccc cttacgacct tatcagcagg
      841 aagctattgg acgttatctt cactacaaaa cggataataa tcgagtcatt ccagagcaag
      901 ttctctacaa tatggcaact ggttctggta aaacgctctt gatggcgacg attatcttgg
      961 agaagtacca gcaaggtgag cgaaatttta ttttctttgt gaacaacgat aatatcctga
     1021 ctaaaacaaa ggataacttc ttagaaagtg cttctggtaa gtatcttttt gcggaaaaga
     1081 ttgtcataga cggacaaatc gtgacagtgc gtgaagtgac ggatttttca gatagccgtg
     1141 atgatagtat taacatcgtc tttactacta tccaaaagct tcaccaagac cttaatactc
     1201 cgagagaaaa tcgcctctca tatgagcagt ttaaagatat ttcggttgtc atgttggcgg
     1261 atgaagctca ccacttgaat gctggtttga gtaagtcgga gaaagatgac aataccagtt
     1321 ggactagtac gattgaaacg attcaaaaga ccgctaaaaa gtccagtatc tttgaattta
     1381 ctgcaacaat tgatctaaca aaccaagcga tcgctcaaaa atatcaaaat tccctgttgt
     1441 ttaagtatga tttgaaagag tttcgcttag ataaatattc caaagatgta ctctttcact
     1501 tggtggatgg tgatgtcaat catcgcatgc ttcaggcaat catcatcagt cagtaccgca
     1561 agaaaatcgc tttgaaaaac ggaattaact taaaaccctt ggtcatgttt aagtcgcaga
     1621 aaattgcaga aagtcaagaa aatttggatg cgtttttggg gttgctagac aacctttctc
     1681 tagaagatat tcaagcacag cgagagctgg tcttagaaat ggatgaaaag ttcagtattt
     1741 tgaaaaaggc attttcttat ttcgagacag ttgggatttc agatactgac ttggtggcgg
     1801 aacttcagga ggatttccgc aaagaacgcc tgctattggt ggatgggaaa aataagaaca
     1861 aggatagcct acaccttcta aataccttgg agcagccaag taatgaaatc cgagcgattt
     1921 ttgccgtcga tatgctaaat gaaggctggg acgttcttaa tcttttcgat attgtacgcc
     1981 tctacgatac ccgtgatggg aaaacaatga aaaacggatt tgttcctgga aaaacgacca
     2041 acacagagaa acagctgatt ggtcgcggtg ctcgttattt tccgtttgtg attggtgata
     2101 atctggaaga gaagtatatt cggaagtttg atgataatga aaataatgag cttcgtgtca
     2161 ttgagcaact gcattatcac tctgcgaata accctcgtta tatttcagaa ctaaagcagg
     2221 ttttgcgtga atctgggatt ttcgatgacc aaaatcttga ggaacgagaa cttaaactca
     2281 aggaatcttt caagaagaca cggacttata ctgatggtgt tgtttggatg aataggcgtc
     2341 tctcgtacga acaacttctt gaacagcgtc aaggaagtct atttgatacc aattttattc
     2401 ccaaatcgtt cgaggtcaaa ctcccaacac acggtgtgcg agatattgaa gcatttgatg
     2461 aagcaatgta cgcttctgaa tccttagaag taattaattt caaatttggc aaagttatcg
     2521 gaaacaatat tgttagagct gctattaacc gcaacaaaaa atttaccttt gataatctac
     2581 aaagagcctt tgtagcactt ggaagtgtat ctgcctttat tggtatgctc gcagatattg
     2641 atattcgagt tgaatctcaa tatcaaatga tgtctgattt gacgccagat gataaacttt
     2701 atatcacgga aaaactgctc catcatattg aaaaagattt gattgcgacc gaggagcgct
     2761 tcttcggttc agaaaaattc gaacaataca aaataaaaga cttgtttgag gataatatct
     2821 tgcgaaaata caccatcaat catcaaagtc aggcagagtt tggtttatca cagaaaaatc
     2881 cagccgaaac gcaatatttt gaagacttgg ataatctaga ctggtacgct tatgatgaca
     2941 acttcggcac aagtgaggaa aaacttctcg ttcgcctgat taaagattta atgattgaac
     3001 ttgaagaaaa atggacggat atttacctgc ttcgaaatga aaaagctgta aagatttata
     3061 gttttgataa ggggcaagcc tttgaaccag actttctcat gtttgccaac gacaaaaata
     3121 caggaaatgt ttcgtggcag attttcattg aaccgaaagg gagccagttc ttggattctg
     3181 ataatacttt caaaaatagc aaggaaggct ggaaacaaga gttcttgtgt cagatttccg
     3241 agcgagacga ggcgagaaca ctggttgatg atgaccgcta tcgtattgtc ggattgccgt
     3301 tctttaatga ggcggtaagc aaggatgagg ttagggaaga gttacggata ctttaaatta
     3361 ggagattgtg caatgtatat ttctaaaatc aaattaacga attttaaaag ctttaaaggt
     3421 catcatgata ttgagttctc aaagggagta aatttttttg ttgggaataa taactgtggt
     3481 aagacaacga tttttaaggc agtggaattt atccagagtg ggaaaaataa gttagatttt
     3541 ataactaaag gtagtgaaag cgaggatgta gctgttgaag ttgagtttaa aggagcagat
     3601 ctaaatgata taattcatga cgaaaaactt aatttaaata aatatagtga atatgtaatt
     3661 gacaatgggg atggaacata tagtctcaga gttttaagaa cttcccaaaa atgcgatgta
     3721 atacaaggta aaaaaacagt ttctttagat ttatcaaaag taagaattta caatccaaat
     3781 tctatcgaaa aagaggagct aaaaaaattt gaaaacccta cggg
//
LOCUS       DBNFCX010000139         3817 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.140, whole genome shotgun sequence.
ACCESSION   DBNFCX010000139 DBNFCX010000000
VERSION     DBNFCX010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3817)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3817)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3817
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.140"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(79..1071)
                     /gene="asnA"
                     /locus_tag="AC1PJC_002106"
     CDS             complement(79..1071)
                     /gene="asnA"
                     /locus_tag="AC1PJC_002106"
                     /EC_number="6.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016502595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004071 - aspartate-ammonia ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--ammonia ligase"
                     /protein_id="HIP6621077.1"
                     /translation="MKKSFIHQQEEISFVKNTFTQYLKDKLEIVEVQGPILSRVGDGM
                     QDNLSGVENAVTVNVKLIPDATYEVVHSLAKWKRHTLARFGFNEGEGLFVHMKALRPD
                     EDSLDPIHSVYVDQWDWEKVIPDGRRNLAYLKETVEQIYKAIRLTELAVEARYDIESV
                     LPKKITFIHTEDLVKNFPDLTPKERENVVAKEYGAVFLIGIGGELADGKPHDGRAPDY
                     DDWTSPSEAGYKGLNGDILVWNEALGSAFELSSMGIRVDEEALKRQVAITGDEDRLEF
                     DWHRALLNGLFPLSIGGGIGQSRLAMFLLRKKHIGEVQSSVWPQEVRDSFENIL"
     gene            complement(1154..2215)
                     /locus_tag="AC1PJC_002107"
     CDS             complement(1154..2215)
                     /locus_tag="AC1PJC_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HIP6621078.1"
                     /translation="MTSVNSKLQIHLPSLIPFGFIFSDGRYTYREVFMEGQFEAVVEV
                     DEAGQLSSYVWDCEMEEVYTAHLVNAPAGAFVGQVRESYQSILDRVEEACCIALPFTK
                     DQSNRIAQLIKEQWGDLPDYPFAKLPTYGAFRHPDNNKWYALVSQIPRNKLDGSGSQE
                     EVEIVNLKVDGREIAELLSQSGIFPAYHMSKKTWVSVLLDDTVEDQTVFALLEKSRYL
                     VGPKSYKAAQGPDYWVIPANPKVYDIDTEFAENKVVYWPQKSTIQAGDIVAIYVTAPV
                     QAIRYVCRVLGANLENHGESDIPTEKKLMQVELLAQFSDDVLPRARMMDLGVRAVRGP
                     RRLTEGVIEVLTSEVKNLH"
     gene            complement(2212..2880)
                     /locus_tag="AC1PJC_002108"
                     /pseudo
     CDS             complement(2212..2880)
                     /locus_tag="AC1PJC_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943411.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(3344..>3817)
                     /locus_tag="AC1PJC_002109"
     CDS             complement(3344..>3817)
                     /locus_tag="AC1PJC_002109"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621079.1"
                     /translation="GNSNIRKVESYESKNFSDYYRANFKTIYDFAKISNSKLSTVENC
                     VRFANMGRLILESHARSNYRLENATSSAITQLMKFYNISEDKEEEFKGMLDVINSLSH
                     GLSFYDIDINQISPREIRDAIRKLISIMFNYDKNHVIAMIGLADDSRALREIESW"
BASE COUNT         1078 a          937 c          658 g         1144 t
ORIGIN      
        1 aaaatcacag ataatcttgt tgtaaatgtt ttcagatagc agattgaaag cagaagaaaa
       61 gagattgaag ccaatctctt ataaaatgtt ctcaaaacta tctcgcactt cctgtggcca
      121 tacgctagat tgaacttcac cgatatgttt cttacgaagc aagaacatgg ccaaacggga
      181 ttgaccgata ccgccaccga ttgaaagcgg gaagagacca ttcaaaaggg cacgatgcca
      241 atcaaattcc aaacggtcct cgtcacctgt aatagcaacc tggcgcttca gcgcttcttc
      301 atccacacga atccccattg aggacaactc aaaggctgaa ccaagtgctt cgttccaaac
      361 caagatgtcc ccattgagtc ctttgtagcc tgcttcagat gggcttgtcc agtcatcata
      421 gtctggtgca cgtccatcat gtggttttcc atctgccagt tcaccgccga taccaattag
      481 gaaaactgca ccgtattctt tggcaaccac attttcacgc tcttttggtg tcaagtctgg
      541 gaagttcttg accaaatcct ccgtgtgaat aaaggtgatt ttctttggta aaacagactc
      601 aatgtcgtaa cgagcttcaa ctgccaactc tgtcagacgg atagccttat aaatttgctc
      661 cactgtttct ttcaagtaag ctaaattccg acgaccatca ggaataacct tctcccagtc
      721 ccattgatcc acgtatactg agtgaatggg atccaaggaa tcctcgtcag gacgaagagc
      781 cttcatgtga acaaagagtc cttctccctc attaaaaccg aatcgagcca aggtatggcg
      841 cttccactta gcaagtgagt gaaccacttc ataagtcgca tctggaatta acttgacatt
      901 aacagtaacc gcattctcca caccggacaa attatcctgc ataccatccc cgacacgact
      961 caaaatcggt ccttgcactt ctacgatttc tagcttgtct ttcaaatact gagtgaatgt
     1021 atttttgacg aaagaaatct cctcttgctg atgaatgaag cttttcttca taccttacct
     1081 ccttaaattt atacacctta ttatactctt ttttacctac ttgtaaagtc tttttattaa
     1141 atattctgat aatttaatgg aggtttttca cttcggatgt cagtacttct atcacgccct
     1201 ctgtcaagcg tctaggacca cgcaccgccc tgactcccaa gtccatcatg cgcgctctcg
     1261 gcaaaacatc atcggaaaac tgagcaagca attccacctg catgagtttc ttttctgtag
     1321 gaatgtctga ctctccatga ttttccaagt ttgcccccaa gactcgacaa acatagcgaa
     1381 tggcctgtac aggtgccgtg acatagatgg caacgatgtc cccggcttga atagttgatt
     1441 tttgtggcca atagactacc ttattctccg caaactcggt atcaatatca tagaccttgg
     1501 gattggctgg aatgacccag taatctggtc cttgtgccgc cttgtaggat ttcggtccca
     1561 ccaaataacg acttttctca aggagggcaa acaccgtctg gtcctccacc gtatcatcca
     1621 gtaagaccga cacccaggtc ttcttcgaca tatggtaggc agggaagatg cccgactgac
     1681 tcagcagctc tgctatttcc cgaccgtcaa ccttgagatt gacaatctcc acctcttctt
     1741 gagaaccgct cccatccagc ttgttcctcg gaatctgact caccagggcg taccacttgt
     1801 tattgtcggg gtggcgaaaa gccccatagg tcggcaactt ggcaaaggga tagtcaggaa
     1861 ggtcgcccca ctgctccttg atgagctggg ctatgcggtt gctttggtct ttggtaaatg
     1921 gcagagcgat acagcaggcc tcctctactc gatccaaaat ggactgatag ctttctctca
     1981 cctgccccac aaaagcccct gctggcgcat tcaccagatg ggcggtatag acctcctcca
     2041 tctcacaatc ccagacatag gacgacagct gaccagcctc atccacctcc accaccgcct
     2101 caaactgccc ctccatgaag acttcacggt aggtgtaacg accatcggag aagataaaac
     2161 cgaaagggat gagagagggg aggtggattt gtagtttgct atttacactt gtcatttttt
     2221 cccttttcta ctaacccagc caatcacatc tgctggtgga ttttccgtat caatccagat
     2281 aaattcaata ccgatttcac catttttgaa tttggttaat cgaataccat ttatttccag
     2341 agattctaat tttttccctg tcagtacttc acgctcagcc agttgaaaaa cacctctcag
     2401 caaccattca ccaagaatat cttgcctatc cactgactga atagccttgc ctgattcttg
     2461 attgatgtag gctttaatag catctcctga tgatagaaaa cgaagcgtaa aagttcgttc
     2521 ttctttcgac agtgccaatt ttttgcctgt ttcatcaaat gtcccaacat tgtgaccgaa
     2581 aaagtctggt cgagcatcat gaaacttttt agaatcaggc aggggaatat aaacctcgct
     2641 gacaggacga taaaccaatt tctccagttt ttcagataat ctctcaatcc ctgactcttg
     2701 agcaaaactc atcaagtccg agcgaatttt cttcatctca gctttttctt ctttagtgga
     2761 ccactttttc aataaaattt cttccaagga ataggtcaca catgccaact cttcagaagt
     2821 gagttgacta gcaaactcct cttggatttt ttgaattcga gttagtctat cctttttagc
     2881 ctgactcacc tctctacctt gactagtaaa ataatcactt acgacgagct ccgaatttta
     2941 cctctaaagg tattgacgaa aacttcataa gctgacctat gatggattcc acctgaacgt
     3001 ttatttcgat gaaaaccatc tccaaatgcc atactatagc taaattcaaa tgcttctctt
     3061 atatgttctt gctttacagg tcccccttga aacgccttag ttttttgtat attttgcctt
     3121 tttccattct agtcctgtac attatctttt cctttataaa taatacgatt aaccaaaatc
     3181 ctcagcacgt aggtcacgtt tagaaacctc aaaaaacaaa tcacatcgac tccgacaaat
     3241 aagcctcaaa acccgaatta ataaaaagca gtctatcagt ttgataggaa tctattcaaa
     3301 tgtattcgag aagatgtaaa gacctagaga agaaataata tagtcaccaa gattcaatct
     3361 ctcttaaggc tctactatca tcagccaatc caatcattgc aattacatga tttttgtcat
     3421 agttaaacat aattgatatt agttttctaa tagcatctct aatttcacga ggggaaatct
     3481 gatttatatc tatgtcataa aacgataaac catgtgataa gctatttatc acgtctaaca
     3541 tccctttaaa ttcctcttct ttatcttctg aaatattata aaacttcatt aattgagtta
     3601 ttgcagatga ggttgcattc tctaacctat aattacttct tgcatgtgat tctaaaataa
     3661 gtcttcccat gtttgcaaat ctcacacaat tttcaactgt gctaagttta ctattactta
     3721 ttttcgcaaa atcatatatt gttttgaaat tagctctata gtaatcacta aagtttttgc
     3781 tctcataaga ttcaactttt cgaatattac tgtttcc
//
LOCUS       DBNFCX010000140         3807 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.141, whole genome shotgun sequence.
ACCESSION   DBNFCX010000140 DBNFCX010000000
VERSION     DBNFCX010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3807)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3807)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3807
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.141"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(54..1109)
                     /locus_tag="AC1PJC_002110"
     CDS             complement(54..1109)
                     /locus_tag="AC1PJC_002110"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HIP6621080.1"
                     /translation="MKRKVFEHYQPYKIKQKARFDLGNNENRIIDWAFLPQETLENLD
                     VNQLSFYGDNTYSELIEKYVAYLGVDPKQVTVGVGSDHLIHMIVSTFMEKDDTFLTVN
                     PDFFMYETYNHMHGSRFEAIDLEEKNDTLVLPVEKLLARAEEVKAKIIMLSNPNNPSS
                     VAYSLEDLEKLAISFKGLLVVDEAYIEFANVESFISRLQQFDNVLVLRTLSKAFGLAG
                     LRVGFAVGSEELIYELDKVIPPFSLSNLTAKMAAVALNYTDKVLETVGVIQNLREEMI
                     LFLQGLDNCQVLPSQASFITFKAPWAEEFYQQALAQDWNFKYYPTGKLGGHIRLSIGR
                     PEEMDMMKKMIEKLVEA"
     gene            complement(1140..1865)
                     /gene="trmD"
                     /locus_tag="AC1PJC_002111"
     CDS             complement(1140..1865)
                     /gene="trmD"
                     /locus_tag="AC1PJC_002111"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HIP6621081.1"
                     /translation="MRIDILTLFPEMFAPLEHSIVGKARDKGLLEINYHNFRENAEKA
                     RHVDDEPYGGGQGMLLRAQPIFDTMDSIEQTKPRVILLDPAGRTFNQAYAEELAQEEQ
                     LIFICGHYEGYDERIKTLVTDEISLGDYVLTGGELAAMTMIDATVRLIPEVIGKEVSH
                     TDDSFSSGLLEYPQYTRPYEYRGMVVPDVLMSGHHENIRKWRLEESLRKTYQRRPDLL
                     ENYNFTAEELTIFEKIKAEDTVD"
     gene            complement(1855..2373)
                     /gene="rimM"
                     /locus_tag="AC1PJC_002112"
     CDS             complement(1855..2373)
                     /gene="rimM"
                     /locus_tag="AC1PJC_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016465641.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HIP6621082.1"
                     /translation="MNYFNVGKIVNTQGLQGEMRVLSVTDFADERFKKGAKLALFDDK
                     DQFVMEVEIASHRRAKNFDIIKFKGMYHINDIEKYKGFSLKIAEENLTDLEDGEFYYH
                     EIIGLDVYENDILIGQIKEILQPGANDVWVVKRKGKKDLLLPYIPPVVLNIDIPNNRV
                     DVELLEGLDDEN"
     gene            complement(2471..>3807)
                     /locus_tag="AC1PJC_002113"
     CDS             complement(2471..>3807)
                     /locus_tag="AC1PJC_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HIP6621083.1"
                     /translation="NNKEKLWLFIKIFLPILIYQFANYSASFIDTMMTGQYSTMDLAG
                     VSMATSLWNPLFSFLTGIVSALVPIIAQYLGKGERDKIREEFHQFVYLAIGLTILLLC
                     SVLFIAVPALAQFGLDESVFQVGRQYLYFISIGILPLLLFSVCRSFFDALGLTRLSMY
                     LMLLLVPFNSLFNYLLIYGKMGLPALGGAGAGLGTALAYWAVLLVIVIVMCKNKTIAT
                     YQIWRWSPIDGSLLKEGLKIGLPIGLQVFAEVAIFAVVGLYMAKFSAQIIAAHQSAMN
                     FATLLYAFPASVSSALAIVIAYEVGAKRPQDVKAYSRLGRLVALGFAGLTLTFLYFFR
                     SKVAYLYGSDAEFIRLTSHFLSFALMFQLADAFTAPIQGILRGYKDTTIPFVLGLVAY
                     WSMTFPVAFLLERFFQMGPEAYWIGLISGIFVCGIALNLRLIKIAHSHLSVK"
BASE COUNT         1181 a          845 c          717 g         1064 t
ORIGIN      
        1 tcaatcattt tctatcattt tctttcaaaa aaaaacaaaa aactagcaga aatctacgct
       61 tccactagtt tctcaatcat ttttttcatc atgtccattt cttctggacg accaatagat
      121 aggcggatat gcccccctaa tttacctgtt ggataatatt tgaaattcca atcctgtgcc
      181 aaggcttgct gataaaattc ttctgcccac ggtgctttaa acgttataaa actagcctga
      241 ctaggtagaa cttgacagtt atctaaccct tgcaagaata aaatcatttc ttctcgcaaa
      301 ttctgaatta ctcccactgt ttctaaaacc ttgtctgtat aattcaatgc aacggctgcc
      361 atttttgcag tcaagtttga caagctgaat gggggaatga ccttgtccaa ttcataaatt
      421 aactcttcgc ttcctaccgc aaagccaact cgtaaacctg caagtccaaa agcctttgat
      481 aaagtccgta aaactaaaac attgtcaaat tgttgcagac gactgatgaa gctttcgaca
      541 tttgcaaatt caatgtaagc ctcatctaca acgagtagcc ctttaaaaga aatagccaat
      601 ttctccaaat cttctagtga ataagctact gaggaaggat tgttaggatt ggaaagcatg
      661 attatctttg ccttcacctc ctccgcacgc gccaacaatt tctctactgg caggacgagt
      721 gtatcgtttt tttcttccaa atcaatggct tcaaaacggc taccatgcat gtgattatag
      781 gtttcataca tgaagaagtc tggattgaca gtcaaaaaag tatcatcctt ttccataaag
      841 gtggaaacaa tcatgtgaat aaggtgatca gagcccacac ctactgttac ttgtttggga
      901 tccactccaa gataggccac atatttctca atcagttcgg agtaagtgtt atcaccataa
      961 aaacttaatt gattgacatc caaattttcc aaggtctctt gtggcaaaaa agcccaatca
     1021 atgatacgat tttcgttatt tcctaaatca aatcttgcct tttgtttgat tttataaggt
     1081 tggtaatgtt caaatacctt gcgtttcatc atttctcctt ctagcaagaa aaacacagtc
     1141 taatcaactg tgtcttctgc cttgattttt tcaaaaatag ttaactcttc agctgtaaag
     1201 ttgtagtttt ccaacaagtc tggacgacgt tgataggttt tgcgtaggct ctcttccaaa
     1261 cgccatttac gaatattttc atggtgaccg ctcattaata catctggaac taccattcca
     1321 cgatactcgt atggtcgggt gtattgagga tattccaata gtcctgatga aaaactatca
     1381 tccgtatgac tgacttcctt gccaataacc tctggaatca ggcgaacggt agcatcaatc
     1441 atggtcatag ctgccaactc tccacctgtc agaacatagt ctccgagaga aatctcatct
     1501 gttaccaagg tcttaatccg ctcatcatat ccttcatagt gaccgcaaat gaaaatcagc
     1561 tgctcttcct gtgccaattc ttcggcatag gcctgattga aagtacgccc agcgggatcc
     1621 aataggataa cacgtggctt ggtttgttca atgctatcca tggtatcaaa aattggctgg
     1681 gcacggagca acatgccttg tcctccacca tagggttcat cgtccacatg gcgagccttt
     1741 tcagcattct ctcggaaatt gtggtagttg atttctagca aacccttgtc acgcgcctta
     1801 cccacaatag agtgttctag aggtgcaaac atctcaggga agagggtcaa aatatcaatt
     1861 ctcatcgtct aggccctcga gcaattccac atcgacacgg ttatttggaa tatcaatgtt
     1921 caagacaaca ggtggaatat atggcaagag caggtctttc ttaccttttc gtttcaccac
     1981 ccagacatca ttggcacctg gctgcaagat ttccttgatt tgtccgatca gaatatcatt
     2041 ctcatagaca tccaagccga taatttcatg gtaataaaac tcaccatctt caaggtcggt
     2101 caagttttcc tcggcaattt tcaaactaaa gcccttgtac ttttcaatat cgttgatatg
     2161 gtacatgccc ttaaacttga taatatcaaa gttcttagcc ctacggtgac tagcaatttc
     2221 cacttccatg acaaactgat ccttgtcatc aaaaagtgca agctttgccc cttttttgaa
     2281 gcgttcatca gcaaaatcgg tcacagacaa aacacgcatt tccccttgta ggccttgcgt
     2341 gttaacaatc tttcctacgt taaaataatt cataatttct ccatttgatt ttctatcctt
     2401 ttattttaac atgagcaaga tattttcaca agagagaaaa agccggatgc ctccgacttt
     2461 catagttaat ttatttcacg gacaaatgag aatgagctat tttgatcaag cgcaaattaa
     2521 gagctattcc gcagacaaaa atccctgaaa taagaccgat ccaataggct tctggtccca
     2581 tttggaaaaa tctttcaagc aagaatgcga cggggaaggt catggaccaa taggcaacca
     2641 aaccaagtac aaagggaatg gtggtatcct tgtaaccacg taaaatcccc tgaataggtg
     2701 ctgtaaaggc atctgctaac tggaacatga gggcaaagct aagaaaatgc gaggtcagac
     2761 ggataaattc tgcatcacta ccataaaggt aggcaacttt agagcggaaa aaatatagga
     2821 aagtgagtgt taagcctgca aaaccaagtg ccaccaagcg tcctagacgg ctgtaggctt
     2881 tcacgtcctg tggtcgttta gcccctactt cataagcaat gacaatagct agggctgaag
     2941 aaactgaggc aggaaaggca tataataatg tcgcaaagtt catagccgac tggtgggctg
     3001 ctataatctg ggctgaaaac ttagccatgt agagcccaac aactgcaaaa attgccactt
     3061 ctgcaaagac ttgtaaaccg ataggaagtc cgattttcag tccttctttc agtaaagacc
     3121 catcaatcgg actccaccgc caaatctgat aagttgcaat ggtcttattt ttgcacatga
     3181 caatgacgat tactagcagt accgcccagt aagccaaagc agtacccaat ccagctccag
     3241 ctccgcctag ggccggtagg cccattttcc cataaattaa gagatagtta aatagactgt
     3301 taaatgggac aaggagcaac atgagataca tggagagtcg ggttaagccc aaggcgtcga
     3361 aaaaagagcg acagacgcta aagagtaaga gtggcaagat gccaatagaa ataaaataga
     3421 ggtactgccg accaacttga aaaacagatt catcaagtcc aaactgagcc aaggcgggaa
     3481 cagcgataaa taggaccgag cacaagagta aaatagttaa tccgatggct agatagacaa
     3541 actgatgaaa ctcctcacga atcttatctc tttcaccttt tcctaaatat tgagcgatga
     3601 ttgggaccag tgcagataca atccctgtta gaaatgaaaa aagcggattc caaagacttg
     3661 ttgccatgga aacacctgcc aaatccatag tgctgtactg gcctgtcatc atggtatcga
     3721 taaaggatgc ggagtaatta gcaaattgat aaattaaaat gggcaaaaat attttgataa
     3781 agagccagag cttctctttg ttatttc
//
LOCUS       DBNFCX010000141         3807 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.142, whole genome shotgun sequence.
ACCESSION   DBNFCX010000141 DBNFCX010000000
VERSION     DBNFCX010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3807)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3807)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3807
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.142"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..295)
                     /locus_tag="AC1PJC_002114"
     CDS             complement(<1..295)
                     /locus_tag="AC1PJC_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5960 family protein"
                     /protein_id="HIP6621084.1"
                     /translation="MNQLEFQRNHLQMDYYSESYQDFERDFYRYSNMNIPLTFLTDDI
                     LKTMATPRKNYFVLNKEKSRDNRDHFFIFEVSTVDENPLIYRYSYKKTTTYLTE"
     gene            complement(282..593)
                     /locus_tag="AC1PJC_002115"
     CDS             complement(282..593)
                     /locus_tag="AC1PJC_002115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001812643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621085.1"
                     /translation="MQKWMDFFLSEHTSALSDDVNKVTYMSDLSLEKKLLLLSQVYAG
                     QLHTRIQVIDKNKHVSYTGTIPSLNKDFILIKTTTGHINLKLKDIISIELVEEELYES
                     A"
     gene            757..893
                     /locus_tag="AC1PJC_002116"
                     /pseudo
     CDS             757..893
                     /locus_tag="AC1PJC_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006268711.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="terminase"
     gene            959..1252
                     /locus_tag="AC1PJC_002117"
     CDS             959..1252
                     /locus_tag="AC1PJC_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000024184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin"
                     /protein_id="HIP6621086.1"
                     /translation="MASTQPVNFRADSTFYKQTKEILADEKLTLSDIFNAALRKIATG
                     AVDPKEFVNSDLQETQYQVAFEDLKKEILIGHQEIEQGKLTTLADVRKEFGLE"
     gene            1245..1583
                     /locus_tag="AC1PJC_002118"
     CDS             1245..1583
                     /locus_tag="AC1PJC_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000181405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA];
                     GO_function: GO:0090729 - toxin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HIP6621087.1"
                     /translation="MNNHKRYHVSLTDQAKKDLRGIHDYILHNFYSQQSADSKLDLIL
                     TALETLETFPEVCPLVSSRGYGELTDDGKRYRYMPIENYLAFYYIDNHEVYVARILNS
                     KQNWAKLFNK"
     gene            complement(3236..3358)
                     /locus_tag="AC1PJC_002119"
     CDS             complement(3236..3358)
                     /locus_tag="AC1PJC_002119"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621088.1"
                     /translation="MLRPILLKDFETFVGDFLAVFDVDTFFLDEINSIVRDASS"
     gene            complement(3383..>3807)
                     /locus_tag="AC1PJC_002120"
     CDS             complement(3383..>3807)
                     /locus_tag="AC1PJC_002120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621089.1"
                     /translation="LFPLYFGFGFSLAFGLVATFGFGLAFGLAVGLGFGLALRFAVVF
                     GFGLAFGLVATFGFGLALRFAVGFGFGLALRFTVVFGFELALRLAVGFGFGLALRLAV
                     GFGFGLALRFAVVFGFGLALGLAEAFGFGETFGFPVSF"
BASE COUNT         1329 a          669 c          740 g         1069 t
ORIGIN      
        1 tttctgttaa atacgttgta gttttcttat aagaatagcg gtagattagc ggattctcat
       61 ctacggtact tacttcaaat atgaagaagt gatcgcggtt atctctggac ttctccttat
      121 tcaggacaaa gtaattctta cgaggagtcg ccattgtttt gaggatatca tcggtcagga
      181 aggtcaatgg aatattcata ttggagtagc ggtagaagtc acgttcaaaa tcttgatagc
      241 tctcgctgta atagtccatt tgcaggtgat tacgctgaaa ttcaagctga ttcataaagt
      301 tcctcctcaa caagttcaat actaataatg tctttcaatt tcaaattgat gtgacctgtt
      361 gtagttttta tcaaaatgaa atccttattc agacttggta tggttccagt gtaagaaaca
      421 tgcttgtttt tatcaatcac ttgaatgcgc gtgtgaagct gcccagcgta tacttgactg
      481 aggagtaata atttcttctc tagtgataaa tcagacatgt acgttacttt gtttacatca
      541 tcagagagtg cagatgtatg ctcagatagg aaaaagtcca tccatttttg catcttagta
      601 tcttggtact ctcttgctga ctacctatca tttgtttact tgatgataca tggaactgag
      661 atattgcagt gccatgttct atatgatgtt tgggcacatc agggctacat caaaactaca
      721 aaggtaaagt tggtcacaag ataagagttc gttagcaata ttaatcctga tgaggaaaac
      781 tcggtcaaaa aattgacggt attgtggcat tcataatagg actggaccct tgtattcgcc
      841 atcaaaccgc tgaaggaagt gtttatgatg aacgtggaat attgagtttt tagttgaatt
      901 tagaaggtaa gcatgataga atgtatttac aaatcatctt tacaacgagg taagaactat
      961 ggcaagcaca cagcccgtca actttagagc agattcaact ttttataaac aaactaaaga
     1021 aattttagca gatgaaaagc tgactctatc tgatatcttc aatgctgccc ttcgtaaaat
     1081 tgcgactgga gcggttgatc ccaaagagtt tgttaacagt gatttacaag agacgcagta
     1141 tcaagttgct tttgaagact tgaaaaagga aattctaatc ggccatcaag aaattgagca
     1201 aggtaaacta acaactttgg ctgatgtgag aaaggaattt ggacttgaat aatcataaac
     1261 gataccatgt ttcgcttacg gatcaagcca aaaaggactt aagagggatt catgactata
     1321 ttttacataa tttctatagt caacaatctg ctgacagtaa actagaccta atcctaactg
     1381 cacttgaaac tctagagacc tttcctgaag tttgtccttt ggtgtctagt cgtggttacg
     1441 gggaattaac agacgatggc aaacggtacc gatatatgcc gatcgagaat tatctagctt
     1501 tttattacat tgataaccat gaggtttatg ttgcaaggat tttgaactct aagcaaaatt
     1561 gggctaaatt attcaataaa taacgaccat ttttctatgc gaaaattaag gaaaaggtat
     1621 cctcagtagt tataaaaaat aatatcgcaa ttaataaatc tggtaagagt catagtctat
     1681 tagatatgga acaagataca ttaccggttg tagaacaaac aacattggat gatgttgcga
     1741 cacctcgttc tcttgatgca tttaaagaat tggcgaaatg agaatactaa ttgttgaaga
     1801 ggttattgaa ttacacagta ggtttctaaa gtaactggtg gttagatggt ttagggatgt
     1861 tagtttaatt gtatcttctt tatcataatc ttttagtctg tattttgatg ttggaaatta
     1921 tccgagtatt gaagaaaagg ttgttagact taatggaatt agactacgac agactgtggc
     1981 tacaatgaag taattttgga gcatcagtct tgttttgctt ttaaggtaag gttgggcaat
     2041 aagcccagga ccactactca gagttcgtgt caacatctca gtgcagtggt tgattgggtt
     2101 taacagtcca gtggactgtt aaaggttgga gataggattt gcgaagcaaa tctcagcaat
     2161 tcgtgttttg cactcccaat ctggccatta cgactgatgc gaacaaagtt cgctttatct
     2221 ccaacctcaa actgtctccc agacagtttg agctatgcgg gggtgggagt gaaacagtct
     2281 ggggatagac tgtttcagct caacaactag aaataaagac ttgacgaact ctttttatct
     2341 tggtcgagtt ctttctcact cccgttattt gaagcctcaa atatagcaaa aacctatctg
     2401 caaatgctga gagcatatct ctgcttgtaa aagcctggaa acctttgaac gaaagagata
     2461 atgaaaagcc ttgaaaccta ggctttttgt attggggtgg ggaagtatca gagtgaggaa
     2521 ttttttggag tgagtagaag tgatagctag aaattatcag tttctatttc catttaccct
     2581 gtgggtacgc gtttgtttct attgacaagg agtttttggg aatagaaagt attcacccgt
     2641 taaaaacaag acaatagatt atcctaataa aatcatgtta taatgttctt tattaaataa
     2701 tttgaaattg aggtaatctg aaaaagaaaa gtactttatt acaatcattt ggaccagttc
     2761 tttttagtac agttctactg ttacacacaa ataataccgt attagctgat gatattgtca
     2821 gtaccaaaaa agataacact gattataact ccaattcttc tccaaattca ctagatacat
     2881 caattgaagc tgccaagcaa aatggaatta tcttagttga aactaaggag cgggtatttc
     2941 aagacgagac attagctgag caagatactc aagaacaaat caatacaatc aaccaagcag
     3001 tggaatctgc aaaaatagag gagcaaacat acaaacaaga ggttcaaaat taccaaactt
     3061 atctggagga taagagtaaa ttcgagcaag atagtatcaa gtatgaaaac tacctaaagg
     3121 aaattgcagt ctatcgggaa aactatcagc aatacgaggc tgataaaaaa ttgtatgatg
     3181 aaacgttagt agcaaacaaa gaaaaacaag atacctatca atcagaactt aagacctatg
     3241 aagaagcgtc tcgtacaatg gaatttatct catccaagaa gaaggtatcc acatcaaaaa
     3301 cagctaaaaa atctcccaca aaagtttcaa aatctttcag taagattggt cgtaacatta
     3361 caagacctat aactggaata cttcagaaac tgacaggaaa cccgaaggtt tctccaaagc
     3421 caaaagcttc tgctaaacct aaggctagtc cgaaaccaaa aacgactgca aaacgcaaag
     3481 caagtccgaa accaaaacca actgcaagac gcaaagcaag tccgaaacca aaaccaactg
     3541 caagacgcaa agcaagttcg aaaccaaaaa cgactgtaaa acgcaaagca agtccgaaac
     3601 caaaaccaac tgcaaaacgt aaagcaagtc cgaaaccaaa agttgctact aaaccaaagg
     3661 ctagaccgaa gccaaaaacg actgcaaaac gcaaagcaag tccgaaaccc aaaccaactg
     3721 ctaaaccaaa ggctagaccg aaaccaaaag ttgctactaa accaaaggct agactaaaac
     3781 caaacccaaa atataaagga aaaagaa
//
LOCUS       DBNFCX010000142         3800 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.143, whole genome shotgun sequence.
ACCESSION   DBNFCX010000142 DBNFCX010000000
VERSION     DBNFCX010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3800)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3800)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3800
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.143"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            108..1656
                     /locus_tag="AC1PJC_002121"
     rRNA            108..1656
                     /locus_tag="AC1PJC_002121"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:15.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            1710..1782
                     /locus_tag="AC1PJC_002122"
     tRNA            1710..1782
                     /locus_tag="AC1PJC_002122"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1743..1745,aa:Ala,seq:tgc)
     gene            1949..>3800
                     /locus_tag="AC1PJC_002123"
     rRNA            1949..>3800
                     /locus_tag="AC1PJC_002123"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:15.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT         1079 a          768 c         1108 g          845 t
ORIGIN      
        1 gaagacgaac caaacgtgca gggtgattta tctaaggata aatcgtcaat gacaaaacaa
       61 aacaataaaa cggaaagcta gcaatagctt gagtttgaat caaaactttt tatgagagtt
      121 tgatcctggc tcaggacgaa cgctggcggc gtgcctaata catgcaagta gaacgctgaa
      181 gtctggtgct tgcactagac ggatgagttg cgaacgggtg agtaacgcgt aggtaacctg
      241 cctcatagcg ggggataact attggaaacg atagctaata ccgcataaca gtatttaccg
      301 catggtagat acttgaaagg agcaattgct tcactatgag atggacctgc gttgtattag
      361 ctagttggtg aggtaacggc tcaccaaggc atcgatacat agccgacctg agagggtgat
      421 cggccacact gggactgaga cacggcccag actcctacgg gaggcagcag tagggaatct
      481 tcggcaatgg gggcaaccct gaccgagcaa cgccgcgtga gtgaagaagg ttttcggatc
      541 gtaaagctct gttgtaagag aagaactgtg agaagagtgg aaagtttctc acttgacggt
      601 atcttaccag aaagggacgg ctaactacgt gccagcagcc gcggtaatac gtaggtcccg
      661 agcgttgtcc ggatttattg ggcgtaaagc gagcgcaggc ggtttgataa gtctgaagta
      721 aaaggctgtg gcttaaccat agtacgcttt ggaaactgtc aaacttgagt gcagaagggg
      781 agagtggaat tccatgtgta gcggtgaaat gcgtagatat atggaggaac accggtggcg
      841 aaagcggctc tctggtctgt aactgacgct gaggctcgaa agcgtgggga gcgaacagga
      901 ttagataccc tggtagtcca cgccgtaaac gatgagtgct aggtgttggg tcctttccgg
      961 gactcagtgc cgcagctaac gcattaagca ctccgcctgg ggagtacgac cgcaaggttg
     1021 aaactcaaag gaattgacgg gggcccgcac aagcggtgga gcatgtggtt taattcgaag
     1081 caacgcgaag aaccttacca ggtcttgaca tcccgatgac cgccctagag atagggtttc
     1141 tcttcggagc atcggtgaca ggtggtgcat ggttgtcgtc agctcgtgtc gtgagatgtt
     1201 gggttaagtc ccgcaacgag cgcaacccct attgttagtt gccatcattc agttgggcac
     1261 tctagcgaga ctgccggtaa taaaccggag gaaggtgggg atgacgtcaa atcatcatgc
     1321 cccttatgac ctgggctaca cacgtgctac aatggctggt acaacgagtc gcaagtcggt
     1381 gacggcaagc taatctctta aagccagtct cagttcggat tgtaggctgc aactcgccta
     1441 catgaagtcg gaatcgctag taatcgcgga tcagcacgcc gcggtgaata cgttcccggg
     1501 ccttgtacac accgcccgtc acaccacgag agtttgtaac acccgaagtc ggtgaggtaa
     1561 ccttttagga gccagccgcc taaggtggga tagatgattg gggtgaagtc gtaacaaggt
     1621 agccgtatcg gaaggtgcgg ctggatcacc tcctttctaa ggaaatggaa acctgtacgt
     1681 cagtcttctt taattttgag aggtcttgtg gggccttagc tcagctggga gagcgcctgc
     1741 tttgcacgca ggaggtcagc ggttcgatcc cgctaggctc cattaacaac ggaagttgtt
     1801 aagattttgt ccattgaaaa ttgaatatct atcaaacatt cctgatgtat ctgaaaggat
     1861 acattaagaa atagtaacaa gaaaataaac cgaaaacgct gtgaatattt aatgagtttt
     1921 ctaatttttg aaaaaattag gttaataagg ttaagttaat aagggcgcac ggtggatgcc
     1981 ttggcactag aagccgatga aggacgtgac taacgacgaa atgccttggg gagctgtaag
     2041 taagcaatga tccagggatg tccgaatggg ggaacccggc aggtaatgcc tgtcactcac
     2101 tactgttaag gtagtgtaga ggaagacgca gtgaactgaa acatctaagt agctgcagga
     2161 agagaaagca aaagcgattg ccttagtagc ggcgagcgaa acggcaggag ggcaaaccga
     2221 ggagtttact cctcggggtt gtaggactgc aatgtggact taaagagtat agaagaatta
     2281 cctgggaagg taagccaaag agagtaatag cctcgtattt gaaatattct ttatacctag
     2341 cagtatcctg agtacggcga gacacgcgaa atctcgtcgg aatccgggag gaccatctcc
     2401 caaccctaaa tactctctag tgaccgatag tgaaccagta ccgtgaggga aaggtgaaaa
     2461 gtaccccgga aggggagtga aatagaacct gaaaccgtgt gcctacaaca agttcgagcc
     2521 cgttaatggg tgagagcgtg ccttttgtag aatgaaccgg cgagttacga tatgatgcga
     2581 ggttaagttg aagagacgga gccgtaggga aaccgagtct taatagggcg cattagtatt
     2641 atgtcgtaga cccgaaacca tgtgacctac ccatgagcag gttgaaggtg cggtaagacg
     2701 cactggagga ccgaaccagg gcacgttgaa aagtgcttgg atgacttgtg ggtagcggag
     2761 aaattccaaa cgaacttgga gatagctggt tctctccgaa atagctttag ggctagcgtc
     2821 gacatttgag aatcttggag gtagagcact gtttggatga gggggccatc tcggtttact
     2881 gatttcagat aaactccgaa tgccaatgat ttatggtcgg cagtcagact gcgagtgcta
     2941 agatccgtag tcgaaaggga aacagcccag accaccagct aaggtcccaa aataattgtt
     3001 aagtggaaaa ggatgtgggg ttgcacagac aactaggatg ttagcttaga agcagctatt
     3061 cattcaaaga gtgcgtaata gctcactagt cgagtgaccc tgcgccgaaa atgtaccggg
     3121 gctaaaacaa tttaccgaag ctgtggataa cactttagtg ttatggtagg agagcgttct
     3181 atgtgtgaag aaggtatacc gtgaggagtg ctggaacgca tagaagtgag aatgccggta
     3241 tgagtagcga aagatgggtg agaatcccat ccaccgtaag actaaggttt ccaggggaag
     3301 gctcgtccgc cctgggttag tcgggaccta aggagagacc gaagggtgta tccgatggac
     3361 aacaggttga tattcctgta ctagagtatg aagtgatgga gggacgcagt aggctaacta
     3421 aagcgggcga ttggaagtgc ccgtctaagc agtgaggtgt gatatgagtc aaatgcttgt
     3481 atctgtaaca ttgagctgtg atggggagcg aagttaagta gcgaagttag tgacgtcaca
     3541 ctgccgagaa aagcttctag cgatgtatca tactctaccc gtaccgcaaa ccgacacagg
     3601 tagtcgaggc gagtagcctc aggtgagcga gagaactctc gttaaggaac tcggcaaaat
     3661 gaccccgtaa cttcgggaga aggggtgctg acttaaagtc agccgcagtg aataggccca
     3721 agcaactgtt tatcaaaaac acagctctct gctaaatcgt aagatgatgt atagggggtg
     3781 acgcctgccc ggtgctggaa
//
LOCUS       DBNFCX010000143         3776 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.144, whole genome shotgun sequence.
ACCESSION   DBNFCX010000143 DBNFCX010000000
VERSION     DBNFCX010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3776)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3776)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3776
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.144"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            298..579
                     /gene="groES"
                     /locus_tag="AC1PJC_002124"
     CDS             298..579
                     /gene="groES"
                     /locus_tag="AC1PJC_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HIP6621090.1"
                     /translation="MLKPLGDRIVVKIEEKEQTVGGFVLAGASQEKTKEASVLAIGQG
                     IRTLNGDLVAPAVAVGDTVLIDAHAGLEVKDGDQNVHIIREADILAIVE"
     gene            590..2212
                     /gene="groL"
                     /locus_tag="AC1PJC_002125"
     CDS             590..2212
                     /gene="groL"
                     /locus_tag="AC1PJC_002125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940029.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA];
                     GO_process: GO:0042026 - protein refolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HIP6621091.1"
                     /translation="MAKEIKFAADARESMVRGVDILADTVKVTLGPKGRNVVLEKAYG
                     SPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREG
                     LKNVTAGANPIGIRRGIEAAVATAVEALKAQASPVSNKAEIAQVAAVSSRSEKVGEYI
                     SEAMERVGTDGVITIEESRGMETELDVVEGMQFDRGYLSQYMVTDNEKMVAELENPFI
                     LITDKKISHIQDILPLLESILQTNRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKA
                     PGFGDRRKAMLEDIAILTGGTVITEDLGLDLKDATIEALGQAAKVVVDKDGTTIVEGA
                     GNPEAIANRVAVIKSQIEGTTSEFDREKLQERLAKLSGGVAVIKVGAATETELKEMKL
                     RIEDALNATRAAVEEGIVAGGGTALVNVIDSVAKLELKGDDETGRNIVLRALEEPVRQ
                     IAYNAGYEGSVIIDKLKNSELGTGFNAATGEWVNMMDAGIIDPVKVTRSALQNAASVA
                     SLILTTEAVVANKPEPAAPAMPQGMDGMGMGY"
     gene            2354..>3776
                     /locus_tag="AC1PJC_002126"
     CDS             2354..>3776
                     /locus_tag="AC1PJC_002126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1182 family transposase"
                     /protein_id="HIP6621092.1"
                     /translation="MLHKENPDYNRGQFGFYSLDDLVPQDHLLRQIEEAIDFSFIYDL
                     VADSYSDDTGRPSLDPILLIKIPILQCLFGIRSMRQTIKEIEVNTAYRWFLGLRLDDK
                     VPHFTTYGKNYVRRFQDRQVIEGIFTHILGLCVNAGFIDPTEIFIDGTHIKAAANNRK
                     FINREIEKQAKFMSDQLEIEINRDREKHAKKPLGPAKEEGPIAKKISTTDPESGWFHK
                     GDHKEVFAYTAQVACDKHGWALAYSVEAGNVHDSQAFPVLFAKLQPFQPSFLVADSGY
                     KTPSIARFLLEQEITPVFPYTRPKGKKGKLRSKDFVYDEYYDCYICPENQVLTYRTTT
                     REGYREYKSDSAICATCPLLSICTESKNKQKVVTRHIWKEALESCEEIRHRKGMKELY
                     QKRKETIERLFGTAKEYHNLRYTREKGKSKMEDKVGLTLACLNLKKLVKMRTGKPFYF
                     VQIATILAKRRTIRPINRKRQTSS"
BASE COUNT         1172 a          732 c          880 g          992 t
ORIGIN      
        1 caaaagccta atttacgttt taaaaaccat tctgcaaaac tttcgtaggc tgaaaatcgg
       61 ctttcgaggt aatctgtttt taaatctcta aaaaatttca tgaatccccc ttaacttttt
      121 aataatagta tagcatagtt ttgctataat taacaggttg tatttcctca gtcctgcgac
      181 ggattttaga taaattaaaa aagaattttc ttgactattt ttgaccaagt gatacaatag
      241 gaaatgtgaa ttagcactcg gaggtaaaga gtgctaaaaa gaccaggagg taatacaatg
      301 ttgaaaccat tgggcgatcg tatcgtcgta aaaattgaag aaaaagaaca aacagttgga
      361 ggctttgtcc tagcaggcgc aagccaagaa aagacaaaag aagcaagtgt cctagcgatc
      421 ggacaaggga ttcgtacctt gaatggtgat ttggttgccc cagcggtggc agttggagat
      481 actgtactga ttgatgctca cgcaggattg gaagtcaaag acggtgatca gaacgttcac
      541 atcatccgtg aagcagacat tttggcaatt gtagaataga ggtaggaaaa tggcaaaaga
      601 aattaaattt gcagcagatg cacgtgaaag catggtccgt ggtgtcgata ttttggctga
      661 tacagtcaaa gtaaccttgg gtcccaaagg tcgcaatgtt gttttggaaa aggcttatgg
      721 ctcaccactt attactaatg atggtgtaac cattgctaaa gaaatcgagt tggaagacca
      781 ttttgaaaat atgggtgcta agttggtatc cgaagtggct tcaaaaacca atgatattgc
      841 tggtgacggt acaacaactg ctactgtctt gacccaagct atcgtacgtg aaggcttgaa
      901 aaacgtaact gcaggtgcca acccaatcgg aattcgtcgc gggattgaag ccgcggttgc
      961 gacggcggtt gaagccttga aagcacaagc aagtcctgta tccaataaag ctgaaattgc
     1021 acaggtagca gcggtatctt cccgttctga aaaagttggt gagtacattt cagaagcaat
     1081 ggagcgcgtg ggaacagacg gcgttattac tatcgaagaa tctcgcggta tggaaactga
     1141 gctggatgtg gtagaaggta tgcaatttga ccgtggttat ctgtcacaat acatggtaac
     1201 agataatgaa aagatggtag ctgaacttga aaatccattc atcttgatta cagataagaa
     1261 aatttctcat atccaagaca ttttgccact cttggaaagc attcttcaga ccaaccgtcc
     1321 tcttttgatt attgctgacg atgtggatgg ggaagcactt cctacccttg ttctcaacaa
     1381 gattcgtggt acattcaacg ttgttgctgt taaggcgcca ggatttggtg accgtcgtaa
     1441 agccatgttg gaagatatcg ctatcttgac tggtggtaca gtgattacag aagaccttgg
     1501 tttggacttg aaagatgcaa ccattgaagc ccttggtcaa gctgcaaaag ttgtggtcga
     1561 caaggatggc acaaccattg ttgaaggtgc tggaaatcca gaagctattg ctaaccgtgt
     1621 tgctgttatc aagtcacaaa ttgagggaac aacttcagaa tttgaccgtg aaaaattaca
     1681 agagcgtttg gccaaattgt caggcggtgt tgctgttatc aaagtcggtg ccgctactga
     1741 gactgagttg aaagaaatga aactccgtat cgaagatgcc ctcaacgcaa cacgtgccgc
     1801 agttgaagaa ggaatcgttg ccggtggtgg tacagccctt gtcaatgtta tcgatagcgt
     1861 agcgaaattg gagttgaaag gcgacgatga aacaggacgc aatattgtcc ttcgtgcctt
     1921 ggaagaacca gttcgtcaga ttgcctataa cgcaggctat gaaggttcag ttatcattga
     1981 taaattgaag aattctgagc ttggaacagg ctttaacgca gcaacaggtg aatgggtcaa
     2041 catgatggat gcaggtatta ttgaccctgt taaagttact cgttctgctc ttcaaaatgc
     2101 ggcttccgta gccagcttga ttttgacaac ggaagcagtt gttgccaata aaccagaacc
     2161 agccgctcca gctatgccac aaggtatgga cggaatgggt atgggctact aagaaatagc
     2221 aaaatgacac agctaattgg ctgtgtcaga atgaagacaa agtcgttaga attatatttc
     2281 taacggcttt ttcatatgta aagtagtata atagagatag gaatactagc taataagcag
     2341 agggagaatc gctatgttac acaaagaaaa tccagactac aatcgcggtc aatttggttt
     2401 ctacagttta gatgaccttg ttcctcaaga tcatctcctt cgtcaaatag aggaagctat
     2461 tgacttctcc tttatctatg acttagtcgc agatagctat agcgatgata cagggcgtcc
     2521 tagtcttgac cctattctgc tcattaaaat tccaatcctt cagtgtctct tcggcattcg
     2581 ttccatgcgt caaaccatta aggaaatcga agtcaacact gcctaccgtt ggtttcttgg
     2641 tcttcgactg gatgataagg tgcctcattt cactacctac ggaaagaact atgtccgtcg
     2701 ttttcaagat agacaagtta ttgaaggcat tttcacccat atcttaggtc tctgcgtcaa
     2761 tgcaggcttc atagatccaa cagaaatttt cattgacggt acccatatca aggctgcggc
     2821 gaataatcgt aaattcatca atcgtgaaat tgaaaagcaa gccaagttta tgagtgacca
     2881 gctagagatt gaaattaaca gggatagaga aaagcatgca aaaaagccgc tagggcccgc
     2941 aaaagaggag ggacccatcg ctaagaaaat ttctacaact gaccctgaaa gtggctggtt
     3001 tcataaaggg gaccataagg aagtatttgc ttatacagct caggttgctt gtgacaagca
     3061 tggttgggct ctggcttata gcgtggaggc tggcaatgtc catgacagcc aggcctttcc
     3121 tgtactcttc gctaaactcc aaccctttca gcctagcttt ctcgttgccg attctggcta
     3181 taagacccca agtatcgctc gcttcctcct agaacaagag attactccag tctttccgta
     3241 tacacgaccg aaaggaaaga aagggaaact acgctcgaag gattttgtct atgatgaata
     3301 ctatgactgt tatatctgtc ctgagaatca ggtcttaacc tatcgcacta caaccagaga
     3361 aggttatcgg gaatataaga gtgactcagc tatctgtgct acttgtccac ttctatcaat
     3421 ttgtacagaa agcaagaaca agcagaaagt ggtaactcga cacatttgga aagaggcttt
     3481 agaaagctgt gaagagattc ggcacaggaa aggtatgaag gagctctacc agaagcggaa
     3541 agaaaccatt gaacgcctct ttgggacagc caaagagtac cacaatcttc gttacacaag
     3601 agagaaaggc aagtccaaaa tggaggataa ggttggactg actttggcgt gtttaaatct
     3661 caagaaattg gtaaaaatga ggacagggaa gcctttttat tttgtccaaa tagccactat
     3721 tctggcaaaa agacggacta tcagaccaat aaacagaaaa agacaaacat caagcg
//
LOCUS       DBNFCX010000144         3763 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.145, whole genome shotgun sequence.
ACCESSION   DBNFCX010000144 DBNFCX010000000
VERSION     DBNFCX010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3763)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3763)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3763
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.145"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..536)
                     /locus_tag="AC1PJC_002127"
     CDS             complement(<1..536)
                     /locus_tag="AC1PJC_002127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HIP6621093.1"
                     /translation="MELADIRQAIMKDAANQAFTNQGIVPLFQAPSTAKILIIGQAPG
                     LKTQEKGRLFDDASGENLRKWLGVDREFFYESGYFAILPMDFYYPGKGKSGDLPPRKD
                     FAPKWHPLIMKQLPQIELTLLIGKYAQDYYLGESHRTVTERVENAADYLPTYFPLPHP
                     SPRNNIWQAKHPWFVEQTL"
     gene            complement(523..981)
                     /locus_tag="AC1PJC_002128"
     CDS             complement(523..981)
                     /locus_tag="AC1PJC_002128"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIP6621094.1"
                     /translation="MELKELTLADMEMVKQLFLSVFSQEPWNDDWSDEEQLNRYIGDL
                     LEHPRALCFGLLDQGSLIALSLGHIRYWYEGTEYRIEELCIARNYQGRGIGQAFLKRI
                     EEQLIERKIVHILLQTERTLPAFFFYKKCGFHALEADVTMVKKVGHHGTC"
     gene            complement(1020..2420)
                     /gene="pepV"
                     /locus_tag="AC1PJC_002129"
     CDS             complement(1020..2420)
                     /gene="pepV"
                     /locus_tag="AC1PJC_002129"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase PepV"
                     /protein_id="HIP6621095.1"
                     /translation="MTVDFRAEFDKRKDEFLADLFDLLRINSERDDSQADDQHPFGPG
                     PVRALDKFLEIAQRDGYPTKNVDNYAGHFEFGEGDEVLGIFGHLDVVPAGSGWNTDPY
                     EPQIIDGKLFARGSSDDKGPTMACYYGLKIIKELGLPTSKKVRFIVGTDEESGWTDMD
                     YYFEHVGLPLPDFGFSPDAEFPIINGEKGNITAYLHFAGENSGAAKLHSFAGGLRENM
                     VPESATAIVSGDLADLDSKLVDFTAAYGLKADAENLENGQVQVTVIGKSAHGSTPEEG
                     VNGATYLAKFLSQFAFDGAAKAYLDLAGQVLLEDHDAKKLGVAIYDEQMGALSMNAGV
                     FKFDETSSDNTIALNFRYPKNTNPEAIKAGLEKLGVEAVSLSEHGHTPHYCPIDDPMV
                     ATLLSVYEKHTGLKGHEQVIGGGTFGRLLKRGVAYGAMFPGDVNTMHQANEFIEVEQL
                     YRAAAIYAEAIYELIK"
     gene            complement(2736..>3763)
                     /gene="sstT"
                     /locus_tag="AC1PJC_002130"
     CDS             complement(2736..>3763)
                     /gene="sstT"
                     /locus_tag="AC1PJC_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003046742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0015826 - threonine transport [Evidence
                     IEA];
                     GO_process: GO:0032329 - serine transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HIP6621096.1"
                     /translation="AHALSQAPAGQKSNMRTVICLYLFGTFAAAFIAVGASYLFPIKL
                     VLSTTTTTDITPPQGIAEVFQDLLLKVVDNPINALATANYIGVLTWAAVFGLAFRHAS
                     KTTKDLLQSAAEVTSKVVGWIIGLAPFGIMGLVFDTIANNGLTALKDYGLLLLLLVGS
                     MFFVALVVNPLIAFLVMKKNPYPLVFECLRVSGVTAFFTRSSAANIPVNMQLCKRLGV
                     DPDTYSVSIPLGATINMAGAAITINILTMAAVHTLGISVDFSSALLLSVVASLSAAGA
                     SGVAGGSLLLIPVACSLFGIPNELAMQVVGVGFVVGVIQDSCETALNSSTDVLFTVVA
                     ERSAWKK"
BASE COUNT         1045 a          877 c          828 g         1013 t
ORIGIN      
        1 agagtctgtt caacaaacca aggatgttta gcttgccaga tattgttcct tggcgatgga
       61 tgaggtaggg gaaaataggt gggtaggtaa tcagctgcat tctctactct ctcggtcaca
      121 gtcctatggg attctcctaa ataatagtcc tgggcatact taccaatcaa caaggtcagc
      181 tcaatctggg gtagttgctt cataatgagt gggtgccatt tgggggcaaa atccttgcga
      241 ggtggcaaat ctccagactt cccctttcct ggataataga aatccatagg aagaatagca
      301 aaatagccag attcatagaa gaattcccta tctactccca accatttccg cagattctct
      361 ccactagcat catcaaagag gcgacctttt tcttgtgttt ttaatcccgg cgcctgtcca
      421 ataatgagga tttttgcagt agacggtgct tggaaaagcg gaactattcc ctgatttgta
      481 aaagcttgat tagctgcatc cttcataatc gcctgacgaa tatcagcaag ttccatgatg
      541 tcctactttc ttgaccattg ttacatctgc ttctagagca tgaaaaccgc attttttata
      601 aaagaaaaag gctggcagag tgcgttcggt ttgcaggaga atatgaacaa tctttctctc
      661 aatcaactgc tcctcaattc tttttagaaa ggcttgtccg attcctcgtc cttggtagtt
      721 gcgagcaata cagagctctt caatacggta ttcggtcccc tcataccagt agcgaatgtg
      781 ccctagagaa agggcaatga ggctaccttg gtcaagcaat ccaaagcaaa gtgctctggg
      841 gtgctccagt aaatcaccta tatagcggtt taattgttcc tcatcagacc aatcatcatt
      901 ccatggctcc tgactaaata cagataaaaa gagctgtttg accatttcca tatctgcaag
      961 cgtgagttct ttcagttcca tacttcctcc taaaaaagac gggcgaaccc gtcttaatac
     1021 tatttgatca attcatagat agcttctgcg taaatggcag cggcacggta gagttgctca
     1081 acttcgataa attcgttggc ttggtgcata gtgttgacat cgcctgggaa catggctccg
     1141 taggcaacac cacgtttaag caagcgaccg aatgtaccac caccgattac ttgttcgtga
     1201 cctttcaagc ctgtgtgttt ttcataaaca gacaataggg ttgcgaccat tgggtcatcg
     1261 attgggcaat aatgtggagt gtgaccatgc tcagacaggc taacagcttc tacgcccagt
     1321 ttttccaaac cagccttgat agcttcaggg ttggtatttt ttggataacg gaagttgaga
     1381 gcaatggtat tgtcagatga ggtttcatca aacttgaaaa cacctgcgtt catagaaagg
     1441 gcacccattt gctcatcgta gatggctacg ccgagttttt tagcgtcatg gtcttccaga
     1501 aggacttgtc ctgccaagtc aaggtaggct ttagctgctc cgtcaaaggc gaattggctg
     1561 aggaatttag ccaaataggt tgctccgttg acaccttctt ctggggttga accgtgggct
     1621 gattttccga tgacggtgac ttgaacttga ccgttttcaa ggttttccgc gtcagctttt
     1681 aggccatagg ctgctgtgaa atctaccaac ttgctgtcta ggtctgccag atcaccagag
     1741 acaatagctg tcgcagactc aggcaccatg ttctcacgca aaccgcctgc gaaggaatgc
     1801 agcttagcag ctccgctatt ttcccccgca aaatgaagat aagctgtgat attgcccttt
     1861 tcgccgttga taatcgggaa ctcggcatct ggagaaaatc cgaaatctgg caggggaagg
     1921 ccgacgtgct cgaagtagta atccatgtcc gtccagcctg actcttcatc ggtaccgacg
     1981 atgaagcgga cttttttaga ggtcggaagg cccagctcct tgatgatttt caagccgtag
     2041 tagcaagcca tggtcggtcc tttgtcgtca gaggatccgc gggcaaagag cttgccgtcg
     2101 atgatttgcg gctcgtacgg gtcggtgttc cagccgcttc ctgctggcac aacgtccaag
     2161 tgaccgaaga taccgaggac ttcgtcgccc tcgccaaact caaagtgacc tgcatagttg
     2221 tcaacgttct tggtcgggta accgtcacgc tgagcgattt ccaggaactt atccaaggca
     2281 cgcactggtc caggcccaaa cgggtgctgg tcatctgcct ggctgtcgtc acgctcagaa
     2341 ttgatgcgga ggaggtcaaa gaggtccgct agaaactcat ctttgcgttt gtcaaactct
     2401 gctctaaaat ctactgtcat atgttctcct tttcagtatc gtcatttggt ttctctttta
     2461 ttacttcgac gagcgaggaa acatcgtttc cttatttcca acttcaaaca ctccactgga
     2521 gtgtttgaac tcaccttgcc taactccagt tatacctgtg gctgttgaca caaacttcgt
     2581 ttgtttcatc tccgaccttc aaaggttccc cgaacctttg aagctagtaa taaaagtaaa
     2641 ccaaaagact agattaaagt aagtctattt tatcacaaaa tgaaagagat ttcagaatta
     2701 aagcgaagaa aaaaagttgg tctcccaact tctttctatt ttttccaagc agatcgttct
     2761 gctacaactg taaacaaaac atcggttgat gagttgaggg ctgtttcaca agagtcctga
     2821 atcactccga ccacaaatcc gactccaact acttgcatgg ctaattcatt tggaatacca
     2881 aaaagactac atgctactgg gatgaggaga agcgagccac ctgctacccc agatgctcct
     2941 gctgctgata gtgatgcaac aacggataaa agaagagctg agctgaaatc aacactgatg
     3001 ccaagtgtat gaacagctgc cattgttaaa atattaatcg taatagccgc gccagccata
     3061 ttaattgtgg caccgagcgg aatggatact gagtatgtat ctggatccac tcctaaacgt
     3121 ttgcagagct gcatattgac aggaatatta gctgctgaac ttcttgtaaa aaatgccgta
     3181 accccactaa cccgaagaca ttcaaacacc agcgggtaag gatttttctt cattacaaga
     3241 aaagcaatta agggattgac aacaagcgcg acaaaaaaca tgcttccaac caagagtaag
     3301 agcagtaaac catagtcttt taaagctgtc agaccattat ttgcaatggt atcgaaaacc
     3361 aagcccatga taccaaatgg tgccagacca ataatccagc ctacaacttt agaagtcact
     3421 tccgccgcag attgcaataa atcttttgtt gtcttgcttg catgacgaaa ggccaagcca
     3481 aacactgccg cccatgtcaa aacaccaata taattagccg ttgcaagagc attgattgga
     3541 ttgtcaacga ccttcaacaa gaggtcttgg aatacttcag caatcccttg tggaggagta
     3601 atgtccgtag tcgttgtagt agaaagaacc agtttaatag ggaataaata gcttgctcct
     3661 acagcaatga aagccgccgc aaaagtacca aatagataca agcagataac tgtcctcata
     3721 ttcgattttt gaccagcagg agcttgtgat agagcatgtg caa
//
LOCUS       DBNFCX010000145         3705 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.146, whole genome shotgun sequence.
ACCESSION   DBNFCX010000145 DBNFCX010000000
VERSION     DBNFCX010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3705)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3705)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3705
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.146"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(57..1511)
                     /locus_tag="AC1PJC_002131"
     CDS             complement(57..1511)
                     /locus_tag="AC1PJC_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division site-positioning protein MapZ
                     family protein"
                     /protein_id="HIP6621097.1"
                     /translation="MGEKNSHHLPLDEEKVLDFEVAKDLTIEEAVKKHKEIEAGVTED
                     DGLLDRYIKQHRAEIESQKFETKINHLPLVEVADEEKNQGHESAEEVEANESSLTEVS
                     EEIAPSVEELSVTPMETLEETVIASTVAMEGLSSVADDSSLELEEDEAEDLDHSEGAD
                     RDQKKKFYFWSAVGLSMIGVMATALVWMNSVNKSNTATSSSSTSTSQTSSTASSSTDA
                     NVTAFEQLYNSFFTDSSLTKLKNSEFGKLAELKVLLEKLDKNSDSYTKAKEQYDHLEK
                     AIVAIQAINGQFDKEVVVNGEIDTTATVKSGESLSATTTGISAVDSLLASVVNFGRSQ
                     QEVASATVASEAAVTSNQGAAETVSTGVPATTEVASTTVSGSTTDFGIAVPAGVVLQR
                     DRSRVPYNQAMIDDVNNEAWNFNPGILENIVTISQQRGYITGNQYILEKVNIINGNGY
                     YNMFKPDGTYLFSINCKTGYFVGNGAGHSDALDY"
     gene            complement(1521..2687)
                     /locus_tag="AC1PJC_002132"
     CDS             complement(1521..2687)
                     /locus_tag="AC1PJC_002132"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="THUMP domain-containing class I SAM-dependent
                     RNA methyltransferase"
                     /protein_id="HIP6621098.1"
                     /translation="MKKQFELIATAAAGLEAVVGREIRNLGYECQVENGRVRFQGDVK
                     SIIETNIWLRSADRIKIIVGQFPAKTFEELFQGVFNLDWENYLPLGCKFPISKAKCVK
                     SKLHNEPSVQAISKKAVVKKLQKHFSRPEGVPLQEMGAEFKIEVSILKDVATVMIDTT
                     GSSLFKRGYRVEKGGAPIKENMAAAILQLSNWYPDKPLIDPTCGSGTFCIEAAMLAKN
                     IAPGLKRSFAFEEWPWVEDQLVAALRKEAQASIKTDLVLDIAGSDIDARMIEIAKKNA
                     FAAGVEQDIVFKQMRVQDLRTDKINGVIISNPPYGERLLDDEAIVTLYREMGETFEPL
                     KTWSKFILTSDELFETRFGQQADKKRKLYNGTLKVDLYQFFGQRVKRQVQEVQG"
     gene            complement(2741..3105)
                     /gene="rnpB"
                     /locus_tag="AC1PJC_002133"
     ncRNA           complement(2741..3105)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="AC1PJC_002133"
                     /product="RNase P RNA component class B"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:15.0:RF00011"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00011"
     gene            complement(3244..3579)
                     /gene="gpsB"
                     /locus_tag="AC1PJC_002134"
     CDS             complement(3244..3579)
                     /gene="gpsB"
                     /locus_tag="AC1PJC_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division regulator GpsB"
                     /protein_id="HIP6621099.1"
                     /translation="MASIKFTTKDIFEQDFKIGFRGYDQDEVNDFLDDIMKDYDAYEA
                     IIKELKGEIARLKAQAANSPKTTLPTEESNDVLRTERPSSATNFDILRRLNRLEKEVF
                     GKQIVQDQE"
BASE COUNT         1029 a          889 c          610 g         1177 t
ORIGIN      
        1 aaattgtcca aaatggactt tttcttcaat ctgaagcgac taaaacgctt ttttgtttaa
       61 taatccaagg catcagaatg accagcacca ttgccgacaa agtaacctgt cttacaattt
      121 atagagaaca agtaggtccc atctggttta aacatattgt agtagccatt accgttgata
      181 atattaactt tttccaagat atattgattg cctgttatat acccacgttg ttgcgagata
      241 gtcacaatat tttcaagaat acctggattg aaattccatg cttcattgtt tacatcatca
      301 atcattgctt gattataagg aacacgactg cggtcacgtt gcaagacgac accagctggc
      361 acggcaatac caaagtcggt tgttgagcct gaaaccgttg ttgaagcgac ttctgttgtc
      421 gctggtacac cagtagatac agtttcagca gcaccttggt tgcttgtgac tgcagcctcg
      481 cttgctaccg tagccgaagc gacttcctgt tgtgaacgac caaaattcac gaccgatgcc
      541 aatagactgt caaccgcact aatccctgtc gttgtcgcag aaagagattc tcctgattta
      601 accgtcgccg ttgtatcaat ttcaccatta acaacgactt ctttatcaaa ctgaccatta
      661 atggcctgaa tggctacaat ggctttttca agatgatcat actgttcttt agctttggta
      721 taactgtccg aattcttatc caatttttcc aacagcactt tcagttctgc taatttgcca
      781 aactctgaat tttttagctt ggtcaaacta ctatccgtaa agaaactatt atagagctgt
      841 tcaaaagcag tcacattcgc atctgtcgaa cttgatgctg tcgatgacgt ctggcttgta
      901 cttgttgaac ttgaagaagt cgcagtattc gatttgttaa ccgaattcat ccaaaccagc
      961 gccgtcgcca ttacaccaat cattgaaagc cctactgctg accagaagta aaatttcttt
     1021 ttctggtccc tatctgcgcc ctcactatgg tccaagtctt cggcttcatc ttcttccaat
     1081 tctaaactag aatcatctgc cactgaagat aacccctcca ttgctacggt acttgcaatc
     1141 actgtttctt ctaaggtttc catcggagtt accgaaagtt cttctacact aggagcaatc
     1201 tcctcactaa cttccgtaag agaagactca tttgcttcta cctcttccgc gctttcatgt
     1261 ccttgatttt tttcctcatc agccacctca actaaaggaa gatgattgat tttggtttca
     1321 aatttttgag attcaatttc tgcgcggtgt tgcttgatgt aacgatccaa gagaccatca
     1381 tcttctgtca cacccgcttc aatctcctta tgttttttga ctgcttcttc gattgttaaa
     1441 tctttcgcca cttcaaaatc taaaactttc tcctcatcca aaggaagatg atgactattt
     1501 ttttctccca cgatgtcctc ctatccttgc acttcttgca cttgacgttt cactcgttga
     1561 ccaaaaaatt gataaagatc cacttttagg gtcccattat acagtttgcg cttcttatcc
     1621 gcttgctgtc caaaacgggt ttcaaacaac tcatcactag ttagaataaa cttagaccat
     1681 gttttgagtg gttcaaaagt ctcccccatt tctcgataca gggtaacaat ggcttcatca
     1741 tccaacaaac gttctccgta aggtggatta gaaataatga caccattaat tttatctgta
     1801 cgcaagtctt gcacacgcat ttgcttgaaa acaatatcct gctcaactcc tgcggcaaat
     1861 gcattcttct tcgcaatttc aatcatacga gcatcaatat ctgatccagc aatatctaat
     1921 accaaatctg ttttgataga agcttgcgct tctttgcgta atgcagccac caattgatcc
     1981 tcaacccacg gccattcctc aaatgcaaaa cttctcttca aacctggagc tatatttttt
     2041 gccaacatag ctgcctcaat acagaaagtt cccgatccgc aagtagggtc aataagcggt
     2101 ttatctggat accaattcga taattgcaaa atagcagctg ccatattttc tttgattggt
     2161 gcgccacctt tttccacccg ataaccacgt ttgaacaaac tagaacctgt cgtatcaatc
     2221 atgactgtcg ccacatcttt caagatcgac acttcaattt taaactctgc ccccatctct
     2281 tgcaagggaa ccccttcggg acgagagaag tgtttctgca gtttctttac aactgctttc
     2341 ttagaaatag cctgcacact tggttcatta tgcaatttcg atttgacaca tttggccttg
     2401 gaaataggga acttgcagcc tagaggcaag taattttccc agtccaagtt aaaaactcct
     2461 tggaacaact cttcaaaagt ctttgctgga aattgtccaa caatgatttt aattctatct
     2521 gctgaacgca gccagatatt ggtttcgata atggatttta catctccttg gaatcgaaca
     2581 cggccatttt ccacttgaca ttcatagccg agattacgaa tttctcgacc cacaaccgct
     2641 tccagaccag ctgctgccgt tgcaatcaat tcaaattgtt ttttcatttt tttcctctac
     2701 aataaaagct agcaaagcta gctacctatt ttatgcaatt ttctgtaagc catgttttgt
     2761 tccggtggta ctaggttcta ccaccttcga taatcatctg tctactgtct aaacagtcag
     2821 gatttctgtt catttccatc catcccatgc cccgaccaaa gtttgggttg ctagcttgag
     2881 gggtttaccg cgttccattt tttacgtttc cataaaaact tcgtcactgt ggcactttca
     2941 gatctactct ggcatatcaa aagacttagc cattttaacc gccgtaacgc ccaagggcgt
     3001 ccctaggctt attgattcgc ctagcacaaa cactactggc atctcagcca gtgctagcat
     3061 ggactttcct catggtagaa aactaccacg cgattatcca aaaattgcac cttaattatc
     3121 ttagaagttg tatctacaaa gcaagccact ttaaagcaag gaatatctct gacacaaata
     3181 cagaatgtat ttgtgcacaa gaaaataact gcgaataaag tgtcagttta ggtgtacaat
     3241 tttctattct tgatcctgaa cgatttgttt tccaaacact tctttctcca gacgattcag
     3301 acggcggaga atatcaaagt ttgtcgctga agatggacgt tctgtacgca atacgtcgtt
     3361 cgattcttca gtaggaagag ttgttttggg agaatttgct gcctgcgctt tcaatcgagc
     3421 aatttcgcct tttaattcct tgataatcgc ttcataagca tcatagtctt tcataatatc
     3481 atcaagaaaa tcgttcactt catcttgatc atagccacga aaaccaattt taaaatcttg
     3541 ctcgaaaata tcttttgtcg taaatttaat acttgccatc tctctctccc taatctaaaa
     3601 cgtcactact cctattatat taaaaaaaat agggaaaaat caagtcaaat cactcagaat
     3661 ttgaaaaatt ttcagcctcc tcattcaatt cttcaaaggt aagcg
//
LOCUS       DBNFCX010000146         3656 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.147, whole genome shotgun sequence.
ACCESSION   DBNFCX010000146 DBNFCX010000000
VERSION     DBNFCX010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3656)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3656)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3656
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.147"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            119..658
                     /locus_tag="AC1PJC_002135"
     CDS             119..658
                     /locus_tag="AC1PJC_002135"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009732451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008752 - FMN reductase [NAD(P)H] activity
                     [Evidence IEA];
                     GO_function: GO:0008753 - NADPH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA];
                     GO_function: GO:0052873 - FMN reductase (NADPH) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HIP6621100.1"
                     /translation="MKNILFIVGSLREGSFNHQMAKQAESILEGQATVSYLNYKEIPL
                     MNQDLETPVLPAVQAARDAIMAADAIWIFSPVYNFAIPGTVKNLIDWLSRALDLSETR
                     GPSALQDKIVTVSSVANAGHEPMFASYQALLPFVRMQVVGEFTGTTVNPEAWGTGQLV
                     LSEEAIAGLQAQAQALLEA"
     gene            826..1446
                     /locus_tag="AC1PJC_002136"
     CDS             826..1446
                     /locus_tag="AC1PJC_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HIP6621101.1"
                     /translation="MKLYYIIDAYCGWTYGFNHIFTKFMQDHPDIEIEVINGGLFVGD
                     NKKKMVDFQQAQTINKQIESYYQMSFGDNYNQLFKDKDFTMDSLGPARAYSVLKNYVE
                     TPNHAQLTLDIQALFFEDGLDLSQADSYTSLIGSYQLPTKAMEELSSILNQPENLHPD
                     FIKAYEMGVTSFPTLLLEKDGNFFNLINQVRTVDDLEKNFQAAITQ"
     gene            1462..2280
                     /locus_tag="AC1PJC_002137"
     CDS             1462..2280
                     /locus_tag="AC1PJC_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytoplasmic protein"
                     /protein_id="HIP6621102.1"
                     /translation="MEKHYKLQNGTELHIFTNDESSFMVTATLIIKNGKALLVGSGFK
                     QSEGERIVRYLQDAQLTLEKIFIIQGDPDYYFALEPIKKSFPEAIVYATSYVIDHILK
                     TVSKKLQVWGGSLGDQAPKNIILPALIQESTLEFEGDKWEFFGSEPSQINLWNAETKT
                     IIGGINTFNQIHLFLADSQTTEKLKAWQDRLKDMKALDASLIIPGHADSEGSFDSQAL
                     DFSIAYIEVAIKLKNEVKDSATFIAKMKEKFPNLRNEGVLELSAKVLTGEIPWG"
     gene            2284..2685
                     /locus_tag="AC1PJC_002138"
     CDS             2284..2685
                     /locus_tag="AC1PJC_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HIP6621103.1"
                     /translation="MSNNQLYKNILEETYLATAQGRIEDFKSHLAADISWTEAAGFPY
                     AGTYIGPDAVIENVHARLGSEWTNYSATPVDYAFSGNRVMVYGYYKGIYNLTQKSFQA
                     DFVHIYDFNAENRITHFIQIVDSALVEKAMR"
     gene            2787..3629
                     /locus_tag="AC1PJC_002139"
     CDS             2787..3629
                     /locus_tag="AC1PJC_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HIP6621104.1"
                     /translation="MYNSQFELGHVALNVRNLELQSLFYQQVLGLQILTENSKQIDLG
                     VGQTALVRLIQTEQKGEVSHSYGLYHLAIVLPSREDLGTIFRHFIDNKVPLQGASDHG
                     YSEAIYLADTEGNGIEIYRDLPQDSWDVRLDGRIVGITEPMDAETIYALGKKADAAYQ
                     MPAGSRMGHVHLSVRESAASSRFYQEVLAVEDKFSVPSAAWLASGDYHHHLAVNEWGG
                     KHLQTRTEGMPGLAYYTVIYSNQEAFEATLNRAIAVNLNLQRLDNSAAFVDVDGIKTK
                     LVLE"
BASE COUNT         1194 a          775 c          694 g          993 t
ORIGIN      
        1 gtattttctc aaaaggagtg atacaatgaa tatcaattgc actatataat acaaaggagt
       61 acctatgtca ctaatctcag ttttcaaaaa tatatttaca aaaaaggaag aaaaaaacat
      121 gaaaaacatt ttatttatcg tcggttcatt acgtgaaggt tcattcaacc accaaatggc
      181 taaacaggct gaaagcatct tagaaggtca agcaactgta tcttatctta actataaaga
      241 aatcccgctt atgaaccaag atcttgaaac accagtcttg cctgctgtcc aagctgcacg
      301 cgatgcgatt atggctgcag atgctatctg gattttctca cctgtttaca actttgctat
      361 tccaggtact gtgaagaact tgattgactg gctcagccgt gccctagact tgtcagaaac
      421 acgtggcccg tctgctctcc aagataagat tgtaaccgtg tcatctgtag caaatgctgg
      481 acacgagcca atgtttgcta gctaccaggc actcctacca tttgttcgca tgcaagtcgt
      541 tggtgagttt acaggtacaa ctgtcaatcc agaagcatgg ggaactggac agttggtatt
      601 gtcagaagaa gccatcgctg gtctgcaagc gcaagctcaa gctttgttag aagcttagat
      661 tctacaggtc aatatacatc cttctatgat ctttatcgag ttgaagttga taaaattgca
      721 gaactctgag atgttgttgt accaatcgag gaagattcca aaacttccaa tagcaatgct
      781 aaattctaat caaaaaccaa gaaatcgaaa tgaaagaaat ttaatatgaa actatattac
      841 atcatcgatg cttattgtgg ttggacatac ggctttaacc acattttcac aaaattcatg
      901 caagaccatc ctgacataga aatagaggtc attaacggag gcttgtttgt cggagataac
      961 aaaaagaaaa tggttgattt ccagcaggca cagaccatca acaaacaaat cgaaagctat
     1021 taccaaatgt cttttggcga taactacaat caattgttta aggataagga ttttactatg
     1081 gactcacttg gtcctgctag agcctactca gtcttgaaaa actatgttga gacacctaac
     1141 catgctcaac taacattaga cattcaagcc ttattttttg aagatgggtt agacctcagt
     1201 caagcagaca gttacaccag cctaatcggt agctatcagt tacctacaaa ggctatggaa
     1261 gaactatcaa gcatcttgaa tcaaccagaa aatctacacc cagactttat caaggcttat
     1321 gaaatggggg taacctcttt cccaaccttg ttacttgaaa aagacggaaa cttctttaat
     1381 cttattaacc aagtacgcac agtagacgat ttggaaaaaa atttccaagc agctattacg
     1441 caatagaaag ggcaactatt tatggaaaaa cattataagc tacaaaatgg aacagaatta
     1501 cacatcttta caaatgacga atcaagtttt atggttacgg caaccttaat cattaaaaat
     1561 ggcaaggctc tccttgtagg ttcaggattt aaacaatcag aaggagagcg aattgttcgc
     1621 tatttacaag atgcgcaact aacattagaa aaaatcttta tcattcaagg ggatccagac
     1681 tattattttg ctcttgagcc tatcaaaaaa tcattccctg aagctattgt ctatgcaacg
     1741 tcttatgtta tcgaccatat tttaaaaaca gtatcaaaaa aattacaggt atggggaggc
     1801 tctttaggtg accaagctcc taaaaatatt attttaccag cgctcattca agaatctaca
     1861 ttagaatttg aaggtgataa atgggaattt ttcggtagtg aaccaagtca aatcaatctt
     1921 tggaatgcag aaaccaaaac cattattggc ggtatcaata cctttaatca aattcacctc
     1981 ttcttagcag attcacaaac taccgagaaa ttgaaagcct ggcaagatcg attaaaagat
     2041 atgaaggcac tggatgcctc tctcattatt ccaggtcatg cagatagtga aggttcattt
     2101 gattctcaag cacttgattt ttcaattgcc tatattgaag tagcaatcaa attaaaaaat
     2161 gaagtcaagg actcagctac ttttatcgct aaaatgaaag aaaaattccc aaatcttcgt
     2221 aacgagggag tcttagaatt gagtgctaaa gtcttaacag gtgaaatacc atgggggtaa
     2281 cgtatgtcaa acaatcaatt atataaaaat attttagaag aaacttatct agctactgct
     2341 caaggtcgaa tagaagattt caagagccat ttggctgctg atatctcttg gacagaagct
     2401 gcaggctttc cctatgctgg tacttatatc ggtccagatg cagtgattga aaacgtccat
     2461 gcaagactag gttctgaatg gaccaattat agtgccacac ctgttgatta cgccttttca
     2521 ggaaaccgtg tcatggttta tggctactac aaggggatct acaaccttac tcagaaatcc
     2581 tttcaagcag actttgtcca tatttacgat tttaatgctg aaaatagaat tacacacttt
     2641 atccaaatcg tagatagcgc acttgttgag aaagctatga gataaaaatc aattttcaaa
     2701 agtctattcg tcacacatta cttcaccaaa agatactaag taactcgaaa attcctataa
     2761 attgtatcag aaagccaggt attcctatgt acaattccca atttgaactg ggccacgtcg
     2821 ccctcaatgt tcgcaatctg gaactccaaa gcctgtttta ccagcaggta ttgggcctcc
     2881 aaattctgac tgaaaactct aaacagattg accttggtgt cggacagacc gcccttgtcc
     2941 gcctgattca aacagagcag aaaggcgaag tcagccacag ctacggactc taccacttag
     3001 ccattgtcct acccagccgc gaggacttag gcaccatttt ccgccacttt atcgacaaca
     3061 aagttcccct ccaaggcgca agcgaccacg gttacagcga agccatttac ctagccgaca
     3121 ccgaaggcaa cggcatcgaa atttaccgcg acctgccgca agactcttgg gatgtccgcc
     3181 tggacggccg tatcgtcggc attactgagc ctatggatgc tgaaacgatt tatgctttag
     3241 ggaaaaaagc tgacgcagcc tatcagatgc cagctggcag tcgcatgggt catgtccatc
     3301 tatctgtccg agaaagcgcc gcttctagcc gattttacca agaagtccta gctgtcgagg
     3361 ataaattctc cgtcccatct gcagcctggt tagcttctgg cgactaccat caccacctgg
     3421 ctgtcaatga atggggtggc aaacatctcc aaacacgaac agaaggtatg ccaggacttg
     3481 cttactacac agtcatctat tccaatcaag aagcatttga agcaaccttg aatcgtgcca
     3541 ttgctgtaaa cctaaacctt caaagactag acaatagcgc agcctttgtt gatgtggatg
     3601 gtataaaaac taagcttgtt ttagaataat aggaaaaagg aagtacagag tacttc
//
LOCUS       DBNFCX010000147         3563 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.148, whole genome shotgun sequence.
ACCESSION   DBNFCX010000147 DBNFCX010000000
VERSION     DBNFCX010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3563)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3563)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3563
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.148"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..728)
                     /locus_tag="AC1PJC_002140"
     CDS             complement(<1..728)
                     /locus_tag="AC1PJC_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000043863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HIP6621105.1"
                     /translation="MSNQLENAKNLYLRGIRDGEIKEVHENYMGASYTQHSTGVPDER
                     EGFATFFEDFFKRNPKREISIVRAIEDGNFVFVHVHQKLNDGEAEWVTADIFRSDENG
                     RIVEHWDVIDAYPKNIGQTDPIYADFELTDLDKTEDNKKIVRRFLVDVLQNGEIEKFD
                     NYVAADLIQHNQEIAQGGAAYKDYLVDKAVDYDFVFKVMGQGDYVVAYSKVWIAGQDY
                     AHFDIYRLKDGKIVEHWDNKEVMP"
     gene            complement(738..2249)
                     /locus_tag="AC1PJC_002141"
     CDS             complement(738..2249)
                     /locus_tag="AC1PJC_002141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease/substrate-binding
                     protein"
                     /protein_id="HIP6621106.1"
                     /translation="MNLFETFIERKDEWGIALFEHLRISLLALIIAIAIAVPLGLILS
                     SKKRLTEWSLQITGIFQTIPSLALLGLFIPFMGIGTLPAVVALVIYAIFPILQGTLTG
                     LGEIDPSLEEAATAFGMNKWEKLKKFKLALAMPILMSGIRTASIMIIGTATLAALVGA
                     GGLGSFILLGIDRNDSALILIGAVSSAVLAVLFGYGIRLLQDKKPKTILLALLVTLFT
                     VGASYVPMLNFSTKQLVIAGKLGAEPEILINMYKLLIEDRTDIKVEIKPNFGKTSFLY
                     EALKSGSIDIYPEYTGTITSTLLKNSPMDLSTNPEEVYTYAKEAILEQDGLMYLAPMA
                     FQNTYALAVTEDYAQKNGIEKISDLARVQQTAVAGFSLEFNDREDGNIGLKNLYNLQL
                     NVKTMEPALRYEAIKNGDVQIVEAFSTDSKVVTYKLKILEDDKQLFPPYQAAPLLTKE
                     TLEKYPELEQVLGVLAGNISTEEMTQMNYAVDVEGKSAEQVAREYLEQEGLLK"
     gene            complement(2249..2980)
                     /locus_tag="AC1PJC_002142"
     CDS             complement(2249..2980)
                     /locus_tag="AC1PJC_002142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIP6621107.1"
                     /translation="MIDYQNVSLTCKVSGPILKNLTFDIQEGEFFVLIGPSGSGKTTT
                     LKLINRLIEQTEGEVFFQGKRLKDFDLRDLRLETGYVLQQIALFPNMTVAENIALIPE
                     MKGLGKEETLTRTRELLTKVGLEPDSYLDRLPKDLSGGEKQRIGILRAIIANPKVLLM
                     DEPFSALDPISKAQLQDLIKELHEEFKMTTVFVTHDMDEAVKLADRICLMQDGQVVQL
                     GSPDELRNHPANDFVKEFIRARGGM"
     gene            complement(2973..3422)
                     /locus_tag="AC1PJC_002143"
     CDS             complement(2973..3422)
                     /locus_tag="AC1PJC_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HIP6621108.1"
                     /translation="MTEVRKRSKDYARMFDQQVGLYEDYARGHGLNAKCLSILMWIYY
                     NPGGVTQNWVSKKTYSSKQVVNATVKKFLDGGLVVLEENPADKRHKKIKLTEEGQQFA
                     SRILDPLEEAENKALSQLSQEEQELMLGLIQRYSQSLMAILKGEDDD"
BASE COUNT          974 a          885 c          671 g         1033 t
ORIGIN      
        1 tctggcatga cttccttgtt gtcccagtgc tcgacaatct ttccgtcttt gaggcggtag
       61 atgtcaaagt gggcatagtc ctgacctgca atccaaactt tcgagtaagc caccacataa
      121 tcgccctgtc ccatcacctt gaagacaaaa tcgtagtcga cagccttatc gaccagatag
      181 tccttatagg ccgcaccgcc ttgggcgatt tcttggttgt gctgaatcag gtccgctgcc
      241 acataattgt caaacttctc gatttcccca ttttgaagga catcgaccaa gaaacgacgg
      301 acgattttct tgttgtcctc ggtcttatct aagtcagtca gctcaaagtc tgcgtaaata
      361 gggtctgttt ggccaatgtt ttttggatag gcatcaataa catcccaatg ctcaacgata
      421 cgaccatttt catccgaacg gaagatgtcc gccgtcaccc actcagcctc accgtcattg
      481 agtttctggt ggacatggac gaagacaaag tttccgtctt caatggcacg aacaatgctg
      541 atttcccgct tgggattgcg tttgaaaaag tcctcaaaga aagtcgcaaa gccctctctc
      601 tcatcaggca cacccgtact gtgctgggta tagctggctc ccatatagtt ttcatgaact
      661 tccttgattt cgccatcacg aatgccacga aggtacagat ttttagcatt ttctagttga
      721 tttgacatga ttttctccta ttttaacaat ccttcttgtt ctaaatattc cctcgccact
      781 tgctctgccg acttgccttc cacatcgacc gcatagttca tctgggtcat ttcctcggtc
      841 gagatgttgc ctgccaagac ccctaggact tgctccaact cgggatattt ctctaaggtt
      901 tctttggtca atagcggagc ggcctggtag ggtgggaaga gctgcttgtc gtcttctagg
      961 attttcagct tgtaagtgac caccttgcta tctgtcgaga aggcttcgac aatttgcaca
     1021 tctccgtttt taatggcttc gtagcgaagg gcaggctcca tggttttaac attgagttgg
     1081 agattgtaga gattttttag accgatatta ccatcttcgc ggtcgttaaa ctctaatgag
     1141 aatcctgcga cagctgtctg ctgcactctt gccaaatccg aaatcttttc aatgccattt
     1201 ttctgagcat aatcttccgt tacagccaaa gcataggtat tctggaaagc cattggtgct
     1261 aaatacatca gaccatcctg ctccaaaatc gcttctttag cgtaagtata aacctcctca
     1321 ggattcgttg ataaatccat tggtgaattt ttcaaaagag tacttgtgat ggtccctgtg
     1381 tactcaggat aaatatcaat cgatcctgat ttgagtgcct cataaaggaa gctagtcttt
     1441 ccgaaattag gttttatctc caccttgatg tctgtccggt cctcaatcaa caacttatac
     1501 atattgatga gaatttcagg ttctgcaccg agcttccctg caatgaccaa ctgctttgtg
     1561 gaaaagttaa gcatgggaac ataactagct ccaacagtaa ataaagtcac caatagagct
     1621 aataaaattg tcttgggttt cttgtcctgc aacagacgaa tgccataacc aaaaagtaca
     1681 gcaaggacag ccgacgatac cgcaccaatc aaaatcaggg ctgaatcatt gcggtcaatt
     1741 ccaagtagaa taaaggagcc caagccccca gctcccacca aggctgccag agtcgccgtt
     1801 ccgataatca taatggaagc cgtccgaatc cctgacatca aaataggcat ggcaagggct
     1861 aacttaaatt ttttcaactt ctcccattta ttcataccaa aagcggttgc tgcttcttcc
     1921 agagaagggt cgatttctcc aagtcctgtc aacgtcccct gcaagatagg aaagatagca
     1981 taaataacaa gtgctactac tgctggcaag gttccgattc ccataaaagg aatgaaaaga
     2041 ccaagcaaag caagggatgg aatagtttgg aagatacctg ttatttgcag actccactcg
     2101 gtcaagcgtt ttttactaga tagaatcagt cccaaaggta ctgcaattgc aatcgcaata
     2161 atcaaagcta gaagggagat acgaaggtgt tcaaaaagag caattcccca ctcgtccttg
     2221 cgttctataa aggtttcaaa taggttcatt acatacctcc tcgagctctg ataaattcct
     2281 tgacaaaatc attggcagga tgattcctca attcatcagg acttcctaat tgcacaactt
     2341 gtccatcttg catgagacag atgcgatccg ccaatttaac cgcctcatcc atatcatggg
     2401 taacgaaaac cgttgtcatc ttgaattcct catgtaattc cttaatcaag tcctgcaact
     2461 gagccttact gattgggtcc agagctgaga aaggttcgtc catgagtaac actttcggat
     2521 tggcaatgat ggcccgcaaa atcccgatcc gctgtttttc tcctccagac aagtccttgg
     2581 gcaaacgatc cagatagctg tctggttcca agccaacctt ggtcaagagc tctctcgtcc
     2641 tcgtcaaggt ttcttcctta cccagacctt tcatttcagg aataagagcg atattttcag
     2701 ctaccgtcat atttggaaaa agggctatct gctgaagaac ataacctgtc tccaaacgta
     2761 agtcacgcag gtcgaaatcc ttaagtcgct taccttgaaa aaaaacctct ccctcggtct
     2821 gctcaattag acggttaatc aatttcaacg tagttgtctt tccgctacca ctcggtccaa
     2881 tcaagacaaa gaactcccct tcttgaatat caaaggtcaa atttttcaag attggtccac
     2941 taaccttaca ggtcagagat acattttgat aatcaatcat catcttctcc ttttaaaata
     3001 gccatgagac tctgactgta gcgctgaatt aatcctagca taagctcctg ttcctcctga
     3061 ctgagttgag acagcgcctt attttccgcc tcctctaagg gatccaaaat gcgactagca
     3121 aattgttgcc cctcctctgt caatttaatt ttcttatgtc gcttatctgc tggattctcc
     3181 tctaaaacta ccaggcctcc atccaaaaat ttctttacag tagcattgac aacttgtttg
     3241 cttgaatagg tcttcttact gacccagttt tgcgtcacac ctccgggatt ataataaatc
     3301 cacatgagaa tggataagca ttttgcattg agtccatgtc cacgagcata gtcttcataa
     3361 agaccgactt gctggtcaaa catacgagca taatccttac ttcttttcct aacttctgtc
     3421 atcgttaccc tccctattaa gcacaatcac cttgccaaaa gcctctggtc tactagtgtt
     3481 caaaacaaca acaattttca caacgacttc ctcctgtaat catgttagtc aatatttttt
     3541 actattttac caaaaaaaga aaa
//
LOCUS       DBNFCX010000148         3484 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.149, whole genome shotgun sequence.
ACCESSION   DBNFCX010000148 DBNFCX010000000
VERSION     DBNFCX010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3484)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3484)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3484
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.149"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..516)
                     /locus_tag="AC1PJC_002144"
     CDS             complement(<1..516)
                     /locus_tag="AC1PJC_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HIP6621109.1"
                     /translation="MMQIKWRDCLLICFGAILYALVLNMLIIPHEFGEGGITGVTLLL
                     FYTTGIETSLSSFVLNGILIVLAYRFLSKLTVFYTFLAVATMSLTMHYTTFLQIKWLP
                     LIPSALLAGLVTGLSMALVIYGNGSTAGSDIIALLCNKYFKWKISTVILIFDVFVVTP
                     LAFKIGLVKTFW"
     gene            complement(594..977)
                     /locus_tag="AC1PJC_002145"
     CDS             complement(594..977)
                     /locus_tag="AC1PJC_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HIP6621110.1"
                     /translation="MGLFSGLLGNASQMDNDKIEQELEHVLLDNEQVEMAFSLVRDLI
                     VFTEYRLILVDKQGMTGKKVSYKSIPYRSISRFTVETSGHFDLDAELKIWISSAVEPA
                     EILQFKSDKSVIAIQKALASAVLGK"
     gene            1204..1956
                     /locus_tag="AC1PJC_002146"
     CDS             1204..1956
                     /locus_tag="AC1PJC_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621111.1"
                     /translation="MENTATQAFEELVAEQKKKRNRVLRIIITLFTAIIVFFACLALF
                     KYNSGNISGTWRNSQAEQDIVETSIKELQNQLPGIDKTWIDATYTMTVVDKKAVFTAT
                     TSFDIPKIAKLTLDQAYKVMLEEAQKEASSLGISVEEYLTTALGADYEKQLKSFLPTQ
                     AEAEKEFHKYQDEYAKELGATYNQETGTISATFFEGEVDRLFHTVTITKINDAAINQL
                     TTYDIAVKDIISYSRKGNTTIINGNEEFTLEK"
     gene            complement(2067..>3484)
                     /locus_tag="AC1PJC_002147"
     CDS             complement(2067..>3484)
                     /locus_tag="AC1PJC_002147"
                     /inference="COORDINATES: protein motif:HMM:NF012869.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIP6621112.1"
                     /translation="CDIYFDYLPRYLKFKLVNRIMELTRNELVATYAVEDIAQFEEKA
                     SSDRVSVLVNHLDVLENGFLIPGLSMVTSVLVFTFSLIGALYLQGTMTIIMLVLCFIP
                     FLAPLINNKILAHTTKESQEEKNVYLKRFSEFVQAFSFIRISNITLVFEKNLETSSQE
                     YAKRAILFSKKQSQTYAVSYGLSSIVYSGSWIIGGIFVFQGMLKISDLIAMTTLMGTV
                     AGPIQTMSGLITEYLASRTVVEELTNILKGQPHEDKVQQELTEPIRTLTLDRVSSHNQ
                     QHPIFDNFSYQFLADKKYAIVGKSGSGKTTLLRLLLGVQSPDEGAIFINQINLSEVAQ
                     ASYFDKMYYLPQKTAIFATTIGDNLTLFETLDEAKALKCLEQVGLLDWFERQEAGFDT
                     PLSSSKQLSGGEERRFDLARALYRDAEVLLFDEPTTGLDSENETFIAETLSNIKEKLL
                     IVVTHSQSESFLSIFDEKVEL"
BASE COUNT         1191 a          736 c          556 g         1001 t
ORIGIN      
        1 ccaaaatgtt tttacaagcc caattttaaa agccaaagga gttaccacaa atacatcaaa
       61 aatgagaata acggtggaaa tcttccattt gaaatattta ttacacaaca atgcaataat
      121 atcacttcct gccgtggacc cgtttccata aatgactagg gccattgata aacctgtcac
      181 caatcccgcc aagagagcag agggaatcag gggcaaccat tttatttgca gaaaagtcgt
      241 ataatgcatg gttaaggaca tagtagcaac cgctaagaaa gtatagaaaa ccgttaactt
      301 actcaaaaaa cgataggcta atacaatcaa aatcccattc aaaacaaaac tggacagact
      361 tgtttcaatc cctgtcgtat aaaacaaaag tagggtaaca ccagtaatcc caccttcgcc
      421 aaattcatgt ggaatgatga gcatattcaa aacaagggca tataggattg ccccaaaaca
      481 tatcaataag cagtctctcc attttatctg catcatattc tctcctcaca aacagtccac
      541 cttagtatat caaaaaaagc agaaagcgga tagccacttt ctgtactttt ttcctatttt
      601 cctaagactg ctgaagccag tgctttttga atagcaatga cactcttatc gctcttaaac
      661 tgaagaattt cagcaggttc aacagccgat gaaatccata ttttcagctc ggcatctaaa
      721 tcaaaatgac cagaggtttc taccgtaaag cgtgaaatcg agcggtaagg aatcgattta
      781 taagatacct ttttcccagt cattccttgc ttatcgacca aaatcaatcg atattctgta
      841 aaaacaatca aatcacgaac cagactaaat gccatctcaa cctgctcatt atccaataga
      901 acatgctcca attcctgttc aatcttatca ttatccattt gcgaggcatt acctagtaaa
      961 cctgaaaata gtcccataat atgactcctt tggtattttt ctatagtata acacaaaata
     1021 atgaaaatag gccactttgt ccttgtcaat catacatcac aacacttccg ctctccttct
     1081 ttatctactt ctgtaaggcg aggaggctcg acacttcttc cctcactctc tacactaata
     1141 tagccattga cagagcaaac aaactatagt atattgaaaa agggggaaca gaaggagaat
     1201 attatggaaa acacagctac tcaagctttc gaagaactcg ttgcggaaca gaaaaagaaa
     1261 cgtaatcgcg tccttagaat tattatcaca ctctttaccg ctattatcgt attttttgcc
     1321 tgtcttgcat tattcaaata taatagtggc aacattagcg gtacgtggcg caattcccaa
     1381 gctgaacaag atattgtcga aaccagtatc aaggaattgc aaaatcaact tccaggtatt
     1441 gataaaacgt ggattgatgc aacttatacg atgacagtcg tagataagaa agccgtcttc
     1501 accgctacaa caagttttga tattcctaaa atcgcaaaat taaccttgga tcaagcttac
     1561 aaggtaatgt tagaggaagc ccaaaaagaa gcaagttctc taggaatttc cgtagaagaa
     1621 tacttaacaa ccgctctcgg agcagactat gaaaagcaat tgaaatcatt tctacctaca
     1681 caagctgagg cggaaaaaga atttcataag taccaagacg agtatgctaa agaactaggt
     1741 gccacataca atcaagaaac tggtactatc tcagctacct ttttcgaggg agaagtcgat
     1801 cggctcttcc ataccgtgac cattacaaaa attaatgacg cagctatcaa ccagctaact
     1861 acatatgata ttgctgtaaa agatattatt tcctattctc gcaagggaaa taccaccatt
     1921 attaacggaa atgaagaatt tactctagaa aaataacaaa acaaggacga gttgtacaaa
     1981 gctcgtcctt ttataatttt catatcaaga tgtagcatat atactcataa gtttgtaatg
     2041 cttaattgct ttaaggactt taaacatcat aactcaacct tctcatcaaa aatggataag
     2101 aatgattcac tttgtgaatg agtaaccact atcaacaatt tctctttaat attagaaaga
     2161 gtctctgcaa taaaagtctc attctcacta tctaaccccg ttgttggttc atcaaatagt
     2221 aagacctccg catctctata aagggcccgc gccaaatcaa atctccgctc ttcaccaccc
     2281 gatagttgtt tagaggagga taaaggcgta tcgaatccag cctcctgtct ctcaaaccag
     2341 tccagcaacc ctacttgttc taaacatttc agggctttag cctcatccaa agtttcaaac
     2401 agtgtcaagt tatctcctat agttgttgca aaaatagctg ttttttgtgg tagataatac
     2461 atcttatcaa aataggaagc ctgagccact tctgaaagat taatctgatt tatgaaaatc
     2521 gccccctcat ctggtgattg aacacctagc aagagtctca gcaatgtcgt cttcccacta
     2581 ccacttttac caacgatagc atatttttta tcagcaagaa attgataaga aaagttgtca
     2641 aatatagggt gttgttgatt atgggaacta accctatcta aagttaaagt ccttataggt
     2701 tctgtcaact cttgttggac tttgtcttca tgtggttgtc ctttcagaat attcgtcaat
     2761 tcttccacga ccgttcgact agcaagatac tctgtaatca gtcctgacat ggtttgaatg
     2821 ggaccagcaa ccgttcccat tagtgtggtc atagcaatca agtctgaaat tttcagcatc
     2881 ccttggaaaa caaagatacc tccaataatc catgaaccag aatagacaat actactcaaa
     2941 ccgtaagata ctgcataggt ttgagattgc tttttggaaa ataggatggc tcttttagcg
     3001 tattcttgac tagaagtctc taggttcttt tcaaagacta gcgtaatatt actaatacgt
     3061 atgaaagaaa atgcttgtac aaactcacta aatcgtttta aatagacatt tttctcttct
     3121 tgactttctt tagtcgtatg agccaaaatt ttattattta tcaacggtgc taagaaaggg
     3181 ataaaacaaa gcaccaacat gataatagtc attgttcctt gcaagtaaag tgctccaatt
     3241 aaggagaaag taaatacaag gacactcgtt accattgata aacctggtat taaaaagcca
     3301 ttttctaata catctaaatg attcactaaa acacttaccc tatctgagct tgctttttct
     3361 tcaaattgag caatatcctc tactgcatag gttgcaacca actcatttct tgtcaattcc
     3421 atgatacgat tgaccaattt aaacttgaga tagcgtggca aataatcaaa ataaatatca
     3481 caaa
//
LOCUS       DBNFCX010000149         3484 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.150, whole genome shotgun sequence.
ACCESSION   DBNFCX010000149 DBNFCX010000000
VERSION     DBNFCX010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3484)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3484)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3484
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.150"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(35..667)
                     /locus_tag="AC1PJC_002148"
     CDS             complement(35..667)
                     /locus_tag="AC1PJC_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HIP6621113.1"
                     /translation="MKEFKTIREDGIVEEEIKKSRFICFMKRVTSEEEARDFINKIKK
                     EHYKATHNCSAFVLGENMEIKRSSDDGEPSGTAGVPMLTVLENHELTNVATVVTRYFG
                     GIKLGAGGLIRAYAGAVANAVKEIGVVEVKEQEGISISMSYAQYQEFANWRAEQGLEE
                     FDTQFTTEVSTMIFVDKEFLEQTLASLTDFYHGKVSTEKANSRIVEVPVY"
     gene            724..2016
                     /locus_tag="AC1PJC_002149"
     CDS             724..2016
                     /locus_tag="AC1PJC_002149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HIP6621114.1"
                     /translation="MKELENYYGRLFTKYQLTAKEREIAEKVPSITKKNNCFRCGTTF
                     KEENKLPNDAYYCRACLLLGRVRSDEKLYHFPQKDFPITKCLKWKGQLTDWQQRISDG
                     LVANVENNRATLVHAVTGAGKTEMIYHTLASVIDKGGAVCLASPRIDVCIELYKRLQN
                     DFSVPISLLHGESEPYFRTPLVVATTHQLLKFYQAFDLVLIDEVDAFPYADNPMLYRA
                     ADNAVKEAGVQVFLTATSTDELDKKVRTGKLSRLSLPRRFHGNPLVVPQKVWFSKFDD
                     TLKKNRLVPKLKKAIEEQRKSGFPLLIFVPEISKGQEFTKIMKKTFPEETIGFVSSQT
                     ENRLEIVEGFRKREITVLISTTILERGVTFPCVDVFVVQANHYLYTASSLVQIAGRVG
                     RSMERPTGLLQFYHEGSTGAIEKAIAEIKQMNKEAGYV"
     gene            2009..2674
                     /locus_tag="AC1PJC_002150"
     CDS             2009..2674
                     /locus_tag="AC1PJC_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HIP6621115.1"
                     /translation="MSNCLLCGQAMKNKTRFSDLIFFSKEKSGICEECFSTFEEIAEQ
                     HCPHCYKNGESESCKDCQYWQNQGKPVVHTALYQYNQAMAHYFSRYKFQGDYVLRNIF
                     AKKLRIALSQFPDYTIVPIPISQKRLSERGFNQVEGLLSSTNIPYQSLLGKYESQKQS
                     SKNRAERLETNQMFYLLDEKEVPEKILLFDDIYTTGATIQLAVELFMKIGRKEIKTFS
                     LTR"
     gene            2751..3293
                     /gene="hpf"
                     /locus_tag="AC1PJC_002151"
     CDS             2751..3293
                     /gene="hpf"
                     /locus_tag="AC1PJC_002151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0045182 - translation regulator activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome hibernation-promoting factor, HPF/YfiA
                     family"
                     /protein_id="HIP6621116.1"
                     /translation="MIKFSIRGENLEVTEALRTYVEEKVAKIEKYFNEEQELNAKVNL
                     KVYRDKRAKVEVTIPVGAVTLRAEDISQEMYGSIDLVVDKIERQIRRNKTKIERKHRQ
                     KVATGQVFTDELVEQTGEEVKVVRTKQVDLKPMDMEEAVLQLELLGHDFFIYTDANDG
                     TTNVLYRREDGDLGLLEVRQ"
BASE COUNT         1180 a          644 c          699 g          961 t
ORIGIN      
        1 taatataaaa aaactatctc gccgatagct ttttttaata gacaggtacc tcaacgattc
       61 gagagttagc tttttccgtg gatacttttc cgtggtaaaa gtcagtgaga cttgctaagg
      121 tttgttcaag gaattcttta tctacaaaaa tcatggttga aacttcagta gtaaactggg
      181 tatcaaattc ttccagacct tgctccgctc gccaattggc aaactcttgg tattgggcat
      241 aggacatgct aatggaaatc ccttcctgct ccttaacttc cacaaccccg atttccttga
      301 ctgcattagc cacggctcca gcgtaagcac gaataagtcc gcctgccccg agtttgatac
      361 ctccaaaata gcgggtaacc accgttgcga cattggtcag ttcgtgattt tctaaaaccg
      421 tcagcattgg tacaccagca gtaccagacg gctccccatc atctgaggaa cgcttgattt
      481 ccatattttc tccaaggaca aaagcagagc agttatgagt agccttgtaa tgttctttct
      541 tgattttgtt gataaagtcg cgagcttcct cctcgctggt cactcgtttc ataaagcaga
      601 taaatcgtga ctttttaatt tcttcttcaa caataccatc ttctctaatt gttttaaatt
      661 ctttcataac caaattgtac taattttttt aaaaactgac aagaaattcc gaataaataa
      721 gtgatgaaag aactagaaaa ttattatgga agattattta ccaaatacca attgacagca
      781 aaagaaagag aaatagcaga aaaagtgcca agtattacaa aaaagaataa ctgctttcgc
      841 tgtggaacaa cctttaaaga agaaaacaaa ttgccaaacg atgcttatta ctgtcgagcc
      901 tgcttgcttc taggcagagt acggtcagac gaaaaactct atcattttcc tcagaaagat
      961 tttccaatca ctaagtgttt aaagtggaaa ggtcaattaa ctgattggca acaaagaatt
     1021 tcagatggac tagttgcaaa cgtggaaaat aatcgtgcga cattggttca tgcagtaaca
     1081 ggagcaggta agacagaaat gatctaccac acccttgcct cagtgattga taaaggcgga
     1141 gcggtttgcc tagccagtcc tcgaattgat gtttgtatcg aactctataa acgtctgcaa
     1201 aatgactttt cagttccaat tagtttacta catggagagt ctgaacccta tttccggacc
     1261 ccattagttg tagcaaccac acatcagtta ttaaaatttt atcaggcctt tgatttggtt
     1321 ttgattgatg aagtagacgc ctttccctat gcagataatc ccatgctcta tcgagcagca
     1381 gacaatgcgg tcaaggaagc tggtgttcaa gtttttctga cagcgacttc aacagatgaa
     1441 ttggataaaa aagtcagaac gggcaaatta agccgtctta gtttgccaag gcgctttcat
     1501 ggcaacccac ttgttgtccc gcaaaaagtc tggtttagta aattcgatga taccctaaag
     1561 aaaaatagac tagttccaaa gttgaaaaaa gcgattgaag aacagagaaa gtcgggcttc
     1621 cccttactca tttttgtccc agaaatctcc aaaggtcaag aatttaccaa gataatgaaa
     1681 aaaacattcc cagaagaaac aattggcttt gtatccagtc aaacagaaaa tcgccttgaa
     1741 atagttgaag ggtttcgcaa gagagaaatc acagtcttaa tctcgacgac tattcttgaa
     1801 cgtggggtga ccttcccatg tgtagacgtc tttgttgttc aagccaatca ttacctctac
     1861 acagcgtcaa gtcttgttca gattgcaggc cgggtcggaa ggagtatgga acgtccgact
     1921 ggtttactcc agttttatca tgagggaagt acaggcgcca ttgaaaaggc aatcgctgaa
     1981 attaagcaga tgaacaagga ggctggttat gtctaattgt ctattgtgcg gtcaagctat
     2041 gaaaaataaa acaagatttt cagatctcat cttctttagt aaagaaaaat cgggcatctg
     2101 tgaagaatgt ttttcgactt ttgaggaaat agcagagcaa cactgtccac attgttataa
     2161 aaatggagaa tcggaaagtt gcaaggattg tcagtactgg cagaatcaag ggaaaccagt
     2221 tgtccacaca gctttgtacc aatataatca agcgatggca cattatttta gtcgctacaa
     2281 atttcaagga gactatgttt taagaaatat ttttgctaaa aagcttagaa tagcgttaag
     2341 ccaatttcct gactacacaa ttgttcccat accaattagt caaaaacgac tatcagaacg
     2401 cggttttaat caagtggaag gacttttgag ttctacaaat attccctatc agtcccttct
     2461 tggaaagtat gaaagccaaa aacaatcatc taaaaatcgt gcagagagac tagaaacaaa
     2521 ccagatgttc tatctattag atgaaaaaga agtgccagaa aaaatattat tattcgacga
     2581 tatatataca acaggagcta caatccaact tgctgtagaa cttttcatga aaattggtag
     2641 gaaagaaatc aaaacatttt cactaacacg ataagaaaac ggttgcaata ttcctataat
     2701 gtggtataat aatagtgaag aaaggcgaaa gccaagaaag aggtactaat atgattaaat
     2761 tcagtattcg tggagaaaac cttgaagtta cagaagcact tcgcacctat gtagaagaga
     2821 aagtggctaa gattgagaaa tatttcaatg aagaacaaga gttgaatgct aaagtaaatc
     2881 taaaagttta ccgtgacaag cgcgcaaaag tagaagtgac aattccagtt ggagcagtta
     2941 cacttcgcgc agaagatatt tcacaagaaa tgtatggctc tatcgatctt gtagtagata
     3001 agattgaacg ccaaattcgt cgtaacaaaa ccaagatcga acgaaaacat cgtcaaaaag
     3061 tggcaactgg tcaagtcttt acagatgaac ttgttgagca aacaggcgag gaagtaaaag
     3121 tggttcgtac taagcaagta gacttgaaac caatggatat ggaagaagca gtcctccaat
     3181 tggagttgct cggacatgat ttctttatct atacagatgc taatgacggt acaacaaatg
     3241 tattgtatag acgcgaagat ggagatttgg ggcttctaga ggtacgtcaa taaagataat
     3301 aaaacagttg cagtttttgc agctgtttta tcattttcaa aaaaccggtt gacaatgtgt
     3361 ataagtcgtg atagaataat tgagttgtct cttgaagggc tagttaacag aggaacgaaa
     3421 aaaagtttcg aaaaagtgtt gacaagaccc tcagaagatg atagaataaa tgagttgtct
     3481 cttg
//
LOCUS       DBNFCX010000150         3399 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.151, whole genome shotgun sequence.
ACCESSION   DBNFCX010000150 DBNFCX010000000
VERSION     DBNFCX010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3399)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3399)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3399
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.151"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            26..373
                     /locus_tag="AC1PJC_002152"
     CDS             26..373
                     /locus_tag="AC1PJC_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HIP6621117.1"
                     /translation="MATFTQHTVPECPYVTTQSVLSGKWSILLLHHIEEGPIRFNELH
                     RRLTGISQATLTKQLRQLEDDGLIIRKVYAQVPPKVEYELSEIGQEFKMVLQQIEVFG
                     DKYIEFVKAKKSE"
     gene            complement(402..2099)
                     /locus_tag="AC1PJC_002153"
     CDS             complement(402..2099)
                     /locus_tag="AC1PJC_002153"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HIP6621118.1"
                     /translation="MKFSDYTYVRPDYEAIKAQFSDLTDQLAQASDLETTRTLVAAVT
                     KLLNLVDTQYNLWMIRHTIDMNDEFYNEETKFWNEYSPLFEELTTNYYRVIVKTPYKA
                     ELSDILPQTFFMQAENKLKTFSSAVIPLFQKENELTDEYSKLIAGAEIDFQGQTYNLA
                     QMGPFGQSTDRDVRKAASAATTAFFESKEADFDRVYDELVKVRTEIAHKLGFKDYVEY
                     GYLKMNRFDYNRDMVKVYREEILKHIVPIVQNLRQRQAKRLQVSSLKHYDLNLEFLDG
                     NAVPQGDPDFIVSQAQDMYRELSAETGEFFDFMIEHELLDLVAKPGKNSGGYCTYIPD
                     FKSPFIFSNFNGTSGDIDVLTHEAGHAFQVYRSRWIQSPEVVWPTYETCEIHSMSMEF
                     MTWPWMDRFFKEQVDKYKFTHLASALLFLPYGVLVDHFQHEVYEHPEMTPAERKATWK
                     KLQDLYLPDRDYSESEALNRGIFWYRQGHIFASPFYYIDYTLAQVCALQFWKRTQVDH
                     DENAWEDYIRICDLGGTKSFLQVVEAANLQSPFKEGALESTAKAAADWLNAVKDDEL"
     gene            2237..3172
                     /locus_tag="AC1PJC_002154"
     CDS             2237..3172
                     /locus_tag="AC1PJC_002154"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000036024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="manganese-dependent inorganic pyrophosphatase"
                     /protein_id="HIP6621119.1"
                     /translation="MSKFLVFGHQNPDTDAIASSYGWAYLEREVFGRDAEAVALGTPN
                     EETAFALDYFGVTAPRVVESAKAEGVGQVILTDHNEFQQSIADIKEVEVAAVIDHHRV
                     ANFETANPLYMRLEPVGSASSIVYRAFKENGVTPPKEVAGLLLSGLISDTLLLKSPTT
                     HATDPQVAAELAEIAGVNLEEYGLALLKAGTNLASKSAEELIDIDAKTFGLNGNDVRV
                     AQVNTVDIAEVLERQAEIEAAMTAASAANGYSDFVLMITDIVNSNSEILALGSNMDKV
                     EAAFNFKLENNHAFLAGAVSRKKQVVPQLTDAFNA"
     gene            3165..>3399
                     /locus_tag="AC1PJC_002155"
     CDS             3165..>3399
                     /locus_tag="AC1PJC_002155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621120.1"
                     /translation="MHKRVKELSKGSSFVMKRRFVVKSIISRIIARFKLDNNELMEFV
                     IPRMIEILVQLIFVWLMSFVRLDFEVTFLIVMIV"
BASE COUNT          938 a          679 c          808 g          974 t
ORIGIN      
        1 atcaaggaaa aataaaggag aaattatggc aactttcaca caacatacgg ttccggagtg
       61 tccttatgtg accactcaga gtgtcttatc agggaaatgg agtatcttat tgctacatca
      121 tatcgaagaa ggtcccattc ggtttaatga attgcatcgt cgattgacag ggatttccca
      181 agcaaccctt accaagcaat tgcgtcagtt agaagacgat ggtttaatca ttcggaaggt
      241 ttatgcacag gttccgccaa aagtagaata tgaactgagc gagattggtc aggaatttaa
      301 gatggttctt caacaaattg aagtttttgg ggataagtac atcgaatttg tcaaagcaaa
      361 aaaatctgaa tgagttcgta tctcattcag atttttatct tttatagttc gtcatcctta
      421 acggcattta gccaatcggc agcagccttg gctgtgcttt caagggcacc ttctttgaac
      481 ggtgattgga ggtttgcggc ttcaaccact tgcaagaagg acttggtacc acccaaatca
      541 cagatgcgga tgtagtcttc ccaagcattt tcatcgtgat ctacctgcgt acgtttccag
      601 aattgaaggg cacaaacttg ggccaaggta tagtcgatgt agtagaatgg actagcaaag
      661 atatgacctt gacgatacca gaagataccg cggttgaggg cttctgactc ggaatagtca
      721 cggtctggca agtagaggtc ttggagtttt ttccaagtcg ccttgcgttc tgctggtgtc
      781 atctctggat gttcatagac ttcgtgctgg aagtggtcca ccaagacacc gtaaggcaag
      841 aagagtaggg cacttgccaa gtgggtaaac ttgtacttat ccacctgttc cttgaagaaa
      901 cggtccatcc atggccaggt cataaattcc atagacatgg agtggatttc acaggtttca
      961 taggttggcc aaacaacttc tggactttgg atccaacgcg aacgatagac ttggaaggcg
     1021 tgacctgctt cgtgggtcaa gacatcaata tcaccgctgg ttccgttgaa gttggagaag
     1081 atgaatgggc tcttgaagtc agggatatag gtacagtagc caccgctgtt tttgcctggt
     1141 tttgcgacca agtccaagag ttcatgctca atcatgaaat cgaagaactc gcctgtttct
     1201 gcggacaatt cacggtacat gtcttgggcc tggctgacga taaagtctgg atcaccctga
     1261 ggaacagcat ttccgtctaa gaactcaaga ttgaggtcgt agtgtttcag gcttgaaact
     1321 tgcaagcgtt tggcttggcg ttgacgcaga ttttgcacaa tcggtacgat gtgtttgagg
     1381 atttcttcac ggtacacctt gaccatatca cgattgtagt cgaaacggtt catcttgagg
     1441 tagccgtatt ctacatagtc cttgaagccg agtttgtggg cgatttccgt gcggaccttg
     1501 actaattcat cgtaaacacg gtcaaaatca gcttccttgc tttcaaagaa ggcagttgta
     1561 gcagcagaag cagccttgcg gacgtcacgg tcggttgatt gaccgaatgg ccccatttgt
     1621 gccaagttgt aggtctgacc ttggaaatca atctctgcac cagcaatcag tttgctgtac
     1681 tcatcggtca attcattttc cttttggaac aagggaatca cggctgatga gaaggttttg
     1741 agcttgtttt ctgcctgcat gaagaaggtc tgaggcaaga tgtctgaaag ctcagcctta
     1801 taaggtgttt ttacaatgac acggtagtag ttggtggtca attcttcaaa aagtggtgaa
     1861 tattcattcc aaaacttggt ttcttcattg tagaactcat cgttcatgtc gatagtatga
     1921 cggatcatcc agaggttgta ctgggtatcg accaagttga gtaatttggt aacggctgcc
     1981 acaagtgtac gagttgtttc caagtcactt gcctgagcca actggtcggt caggtcagaa
     2041 aattgagcct tgatggcttc ataatcggga cggacatagg tatagtctga aaatttcata
     2101 tgtttctcct tttgtattgc taccttctat cttactcttt ttgaaaacgt ttggcaaatc
     2161 ccgacccgtc catgttcaca agtctttcta tttatggtaa aatgtaggag attattagaa
     2221 aaatgaggtt gtagacatgt ctaaattttt agtttttggt caccaaaatc ctgatacaga
     2281 tgccattgca tcatcatacg gctgggctta cttggagcgt gaagtgtttg gtcgtgatgc
     2341 ggaagcagtt gcacttggaa cgccaaatga agaaacagcg tttgcgcttg actattttgg
     2401 tgttactgca ccgcgcgtgg ttgagtctgc taaggcagaa ggcgttggcc aagtcatctt
     2461 gacagaccac aatgaattcc aacaatcaat cgcagacatc aaggaagtgg aagtggcagc
     2521 tgttattgac caccaccgtg tcgcaaactt tgaaacggca aatccattgt acatgcgttt
     2581 ggagccagta ggttcagcat cttcaatcgt ttatcgtgcc ttcaaagaaa atggtgtgac
     2641 acctccaaaa gaagtagctg gacttctcct atcaggtttg atttcagata cactcttgct
     2701 caaatctcca accactcatg caacagatcc acaagtagca gctgagttgg ctgaaattgc
     2761 tggtgtgaac ttggaagaat acggcttggc actcttgaaa gcaggaacca accttgctag
     2821 caagtcagca gaagaattga ttgacatcga tgctaaaacc tttggtttga atggcaatga
     2881 tgtccgtgta gcccaagtca acacagtgga cattgcagaa gtcttggaac gtcaagcaga
     2941 aatcgaagca gctatgacag cagcatcagc agcaaatggc tactctgact ttgtcctcat
     3001 gattacagac atcgttaact caaactctga aatccttgcg ctcggtagca acatggacaa
     3061 ggtggaagcg gccttcaact tcaagctgga aaacaaccac gctttccttg ctggtgccgt
     3121 ttcacgtaag aaacaagtgg tgccacaatt gacagatgct tttaatgcat aaaagagtaa
     3181 aagagctatc aaaaggtagc tcttttgtga tgaaaaggag atttgttgtg aaaagtataa
     3241 tatctagaat tatagcaaga ttcaaactgg ataataatga gcttatggag ttcgttattc
     3301 ctcgtatgat tgagatttta gtgcaattaa tttttgtatg gttgatgtca tttgttagat
     3361 tagattttga agtcacattc ttaattgtaa tgatagtag
//
LOCUS       DBNFCX010000151         3378 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.152, whole genome shotgun sequence.
ACCESSION   DBNFCX010000151 DBNFCX010000000
VERSION     DBNFCX010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3378)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3378)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3378
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.152"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            127..879
                     /locus_tag="AC1PJC_002156"
     CDS             127..879
                     /locus_tag="AC1PJC_002156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor 2"
                     /protein_id="HIP6621121.1"
                     /translation="MSKRKIISSLFLSATVLGGLLFTQTPTVKANEEGKVQITNNTPQ
                     NSPIFSLGDPIQETNYNDSVKKSVSIDATIGDSENEVKWTVNFDSTLWNLRYDKGGYY
                     FIIPDGMQLKKLINKKTGENLLDKFSTDVNDDKNGSDSKYRHFKKGKETHWERDFDKQ
                     WGWSAGRVGSGQVNQWKDENAFSDIYYIDNPSSDGLATYELVTEVTDPSKANKSFPLV
                     AVMKNYYAKTWYLGEPASLAGREVTIESPQTN"
     gene            1212..1895
                     /locus_tag="AC1PJC_002157"
     CDS             1212..1895
                     /locus_tag="AC1PJC_002157"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YjjG family noncanonical pyrimidine
                     nucleotidase"
                     /protein_id="HIP6621122.1"
                     /translation="MQYKHLLFDLDHTLLDFSRGEEVALTQFLTAMEVEDIQAFKEVY
                     RPLNQGMWKDLEKGNITKKELINTRFSRTFAHFGRQVDGREMALRYQEFIGRQGQIFT
                     GADKLLQELTHRGYQIYAATNGVTYIQENRLLHSPIQSYFKEVFISEQMGTQKPAADF
                     YEKIAEQIAGFQFDQALMIGDSLTADIQGGNNAGMDTVWYNPTHMINNSKAVPTYTIH
                     SYQELLDLL"
     gene            1974..2735
                     /locus_tag="AC1PJC_002158"
     CDS             1974..2735
                     /locus_tag="AC1PJC_002158"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HIP6621123.1"
                     /translation="MKRLLRRIRPTKPLKELTWIDLIIITTILCGNAIYTSTTQWIAS
                     FSATETVETGVLSFSPADNWWALANQGKLFLFALVYLLIRNYDFKQLKVKLEWTVLLW
                     GPLIFIGAGLISDLAFTAFSYTGLSGGYNFLGYLPYYDWNIMTVLNRFLAVDYSTVIY
                     SLFNGFYEEFFFLGLLLSTDKKKRSLVLLFSTIIRISFHTYQGMVSALVIGVAFGLFY
                     YYMYTRKNDNLLPYFLGHALADMVGTSFFSLFIAG"
     gene            2978..3229
                     /locus_tag="AC1PJC_002159"
     CDS             2978..3229
                     /locus_tag="AC1PJC_002159"
                     /inference="COORDINATES: protein motif:HMM:NF016419.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin"
                     /protein_id="HIP6621124.1"
                     /translation="MKQIKNRLKKHMFWIGLISLVLMLVDNVLFCYFNIECSRTLNQI
                     EQTICIILSILVFLGVLNNKPNVKVEDIIKNGMSSKNQQ"
BASE COUNT         1087 a          568 c          664 g         1059 t
ORIGIN      
        1 aaagtctttt atttgctaga gactctcatc ttagtaagga agggatagtc tagaaatggg
       61 acgattagct tgccaatatt tttgtagcta gcgcaaaaat agatcaaata aaagaaggag
      121 actcttatga gcaaacgtaa aattatatca agtttatttt taagtgctac cgtattggga
      181 ggattgctgt ttacacagac cccaaccgta aaagcaaatg aagagggaaa ggtgcaaata
      241 acaaataata cccctcaaaa ttcacctatc ttttctctag gggatcctat tcaagaaact
      301 aactataacg actcggtcaa aaagtcagta tccattgatg caacgattgg agactctgaa
      361 aatgaagtaa aatggacggt aaactttgat tctacccttt ggaaccttcg atatgataag
      421 ggaggatact attttataat ccctgatggt atgcaattga aaaaacttat taataagaaa
      481 acaggagaaa acttgttgga caaattctca accgatgtta atgatgataa gaatggctcg
      541 gacagcaagt accgtcactt taagaagggg aaagaaacac attgggaacg agattttgat
      601 aaacaatggg gttggtcagc aggacgtgta ggcagtggtc aagtaaacca atggaaagat
      661 gaaaatgcgt tttcggatat ttattatata gataatccta gcagtgatgg tctggcaacc
      721 tatgaattgg tcacagaagt aacagatcca agtaaagcta acaaatcctt ccctctggta
      781 gcggtcatga agaactatta cgctaaaact tggtatcttg gtgaaccagc ttcgttggca
      841 ggacgcgagg taactattga atctcctcaa acaaattaaa aagattcaca aggaaatatt
      901 ttttctaggc ttttggcgcc agttttcctt caaaattgag aaggtttgag ggttttaaac
      961 caaccagtgg caatcgtgtg tagttaaggc tactacgatt gcctttttct gcgaatcctc
     1021 ttctttttac ttgaataaac cagtgcttga atattatgat gaggaaaccc gtacgtccag
     1081 agctactgaa aactgaaaaa cagtataata gagcctagga cacggagtta tttttttaga
     1141 aactgtggta tactttagat atactgcctg acatcgtttc agtagtttct gcttagaaag
     1201 gacctatcat cttgcaatac aaacacttac tctttgatct tgaccatact cttctggatt
     1261 ttagccgtgg agaagaagta gccttaaccc agtttttgac agctatggag gttgaagata
     1321 ttcaagcttt taaagaagtc tatcgaccgc tcaaccaggg catgtggaag gatttggaaa
     1381 aagggaacat tacaaagaaa gagctaataa acacccgctt ttcacggacc tttgcccact
     1441 ttggtcggca agttgatgga agggagatgg ccttgcgcta ccaagaattt attgggcggc
     1501 agggacaaat ttttacaggt gcagataagc ttttgcagga attgacacac cgaggctacc
     1561 agatttatgc agcgaccaac ggcgtgacat atatacagga aaatcgcttg cttcactcac
     1621 cgattcaatc gtattttaaa gaagtattta tttctgagca gatggggacg caaaagcctg
     1681 cggctgattt ttatgaaaaa atagcagagc agattgcagg ttttcagttt gaccaagcct
     1741 taatgattgg agacagtttg acagcagata ttcaaggcgg caataatgct ggcatggata
     1801 ctgtttggta caatccaact catatgataa ataatagtaa ggcagttcca acctatacca
     1861 ttcatagcta tcaagaatta ttagatttgt tataaggtat tttaagaaac ttataaggat
     1921 tttagtatat aattatacag aaagaatatg tacaaaaata taaggaggaa aaagtgaaaa
     1981 gattactgag acgtattcgt ccaacaaagc ccctaaaaga actcacttgg atagacttga
     2041 ttattatcac aacgatttta tgtggtaatg ctatttatac ctcaaccacg caatggatag
     2101 catcattttc cgcaacagaa actgttgaaa caggagttct atcgtttagt ccagccgata
     2161 attggtgggc tctagccaat caaggaaaat tattcctgtt tgccctggtg tatttattga
     2221 ttcggaatta tgatttcaag cagctaaaag taaaattaga gtggaccgtt ctactctggg
     2281 gaccactgat tttcatcggt gctggtctga ttagcgattt ggcatttaca gctttttcat
     2341 atacaggtct gtctggtggg tataatttcc tcggatactt gccttactat gactggaata
     2401 tcatgacagt gctcaaccgt ttcctagccg ttgactacag cacagttatc tattccttgt
     2461 ttaatggctt ctatgaagag ttctttttct taggcttatt gttgagtaca gataagaaaa
     2521 agcgttcgct ggtcttactc ttttcaacaa ttatccgtat atctttccat acctatcaag
     2581 gaatggtatc tgctcttgtt attggtgtag cctttggtct tttctattac tacatgtaca
     2641 caaggaaaaa tgacaattta ttgccatatt tcttaggaca tgctcttgcg gatatggttg
     2701 gtacaagttt cttctcattg tttattgcag ggtaaacaat gagaagaacg gacatcaagc
     2761 taatcggata aaatttcttt ctccctacag ctgacaaacg gatgatgata tgtagtttct
     2821 atcaactcgg tatcatcacc cgttttattg tgctgatata tttaatctgt tcaggcaaat
     2881 ttcgattgct ttatcatatt ttttatccca tatttttttg aattaacggt ttatttatgt
     2941 taaaatgtat ttttatacat caaaaaggag tatagatatg aaacaaataa agaatcgttt
     3001 aaaaaaacat atgttttgga ttggactcat ttcgttagta ttgatgctcg ttgataatgt
     3061 cctattttgt tattttaata ttgaatgtag tcgtacctta aaccaaatcg agcagacgat
     3121 ttgtatcatc cttagtattc ttgtattttt aggagtgcta aataataaac cgaatgtgaa
     3181 ggtagaagac atcataaaaa acggtatgtc atctaaaaat caacaataat gtttgtttag
     3241 aaactactga tgaggtatct agttatactt acagttcagt atctctagct aagacggatt
     3301 tttcaaaata tagtcagtat cttctaaaaa actattttgt atataaatca ctttacttgt
     3361 gaatacgatt atttaaca
//
LOCUS       DBNFCX010000152         3275 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.153, whole genome shotgun sequence.
ACCESSION   DBNFCX010000152 DBNFCX010000000
VERSION     DBNFCX010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3275)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3275)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3275
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.153"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            111..818
                     /locus_tag="AC1PJC_002160"
     CDS             111..818
                     /locus_tag="AC1PJC_002160"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016465903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070567 - cytidylyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IspD/TarI family cytidylyltransferase"
                     /protein_id="HIP6621125.1"
                     /translation="MIYAGILAGGKGTRMGLQDMPKQFLELGNRPILIHTIEKFLLVP
                     EIAQIFVGVHPDWVTYAEDLVEKYLKKYEDRIIIVDGGSERNETIENIILSIKNSNGL
                     TDDDILITHDSVRPFISLKSIKENIKLIQSSDAVDTVVEATDTIVQSLDNSYITNIPE
                     RQFLYQGQTPQTFRMNDFLNLYHELNDEQKKVLTDACKIFVLSGKRVALANGEYSNIK
                     ITTVTDLKIARSMIEED"
     gene            820..1842
                     /locus_tag="AC1PJC_002161"
     CDS             820..1842
                     /locus_tag="AC1PJC_002161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004257983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HIP6621126.1"
                     /translation="MLNQVYQLIKPKNISIKFEEIDINNTSRVLVKPNYMAICHADQR
                     YYQGKRDPKVLSKKLPMAPIHEACGIVVADPTGTYQVGQKVAMIPNQPPCASDEVFFE
                     NYRSGTYFLSSGYDGFMQETISLPVDRTVPYDSIPDEIAALSEFTSVAMHAINRFDNI
                     AHHIREDVLVLADGSLAFVLASALHFLYPEIRITVVGRNPEKLRLFNFVYATYLTNEI
                     PADLKFDHAFECAGGQGSEPAINDIIDLIKPQGTIMLMGVSDNKIAINTRDILEKGLT
                     VVGSSRSGREDFIKAVEMLSNRRVQSQMRHIIFEEEAVNSVEDIHRVFATDLTTSFKT
                     VFKWDV"
     gene            complement(2049..2179)
                     /locus_tag="AC1PJC_002162"
                     /pseudo
     CDS             complement(2049..2179)
                     /locus_tag="AC1PJC_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001842126.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(2400..>3275)
                     /locus_tag="AC1PJC_002163"
     CDS             complement(2400..>3275)
                     /locus_tag="AC1PJC_002163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009009 - site-specific recombinase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HIP6621127.1"
                     /translation="RYLDFCTIQRRLSSHTIRAYKSDLHQYHNFGTNDIKSYLTFLNQ
                     HIKKTSTLKRKVASLKSYYNFLEEEKLISKNPFHQLRLYYKEEKKLPKTISLKDLQKI
                     YCFAHQQVENSKNKHSKRKAIRNLLLISLLLSTGLRISELCSLKLDNINLENRTIHIL
                     GKGKKERLLYIGNDETFSLLEDYITHHCNHSSYLFTGARNDNHLKEQSVRLILKNISH
                     SLQLKKQITPHMFRHSFATMLLDNGVDIRQIQHLLGHSNINVTQIYTHVSQSKQVEIL
                     SEHNPLNQITPLLRT"
BASE COUNT         1059 a          468 c          646 g         1102 t
ORIGIN      
        1 tagaggtcga aaactatcat tggtagggct aatggtacat gaaaaaattt atcatttgat
       61 attgcacata tatcttaata tgtcaaaaaa gttagtgaag aggtgaactt atgatttatg
      121 caggaatctt agcgggtggt aaaggaacac ggatgggatt gcaggatatg cctaagcagt
      181 ttttagaatt gggaaatcgt ccaatactaa ttcatacgat tgagaagttc ttgttggttc
      241 cagagatagc tcaaattttt gttggtgtac atcctgattg ggttacgtat gcagaagatt
      301 tagttgaaaa atacttaaaa aaatatgaag atagaataat aattgttgat ggtggttctg
      361 aaagaaatga aactattgag aatattattt tatcaataaa gaacagtaat gggctgacag
      421 atgatgatat tttgattaca cacgattcgg ttagaccatt tatttctcta aaatcaatta
      481 aagaaaacat taagttaatc caatcctcag atgcggtaga cactgttgta gaagctacag
      541 atacgattgt tcagagttta gacaatagtt atattactaa tatacctgag cgtcagtttc
      601 tttatcaagg tcaaactcct cagacattta gaatgaatga tttcctgaat ttatatcatg
      661 agttaaatga tgagcagaag aaagttttga cggatgcatg taaaattttc gtgttgagtg
      721 gaaaaagagt tgcattggca aatggtgagt attctaatat aaaaattaca actgtgacag
      781 acttgaaaat tgctcgtagt atgatagagg aagattaata tgttaaatca agtttatcaa
      841 ttgataaaac ctaaaaatat atcaataaaa tttgaagaaa tagatataaa taatactagt
      901 cgtgtactgg ttaaaccaaa ttatatggca atttgtcatg cggaccagcg gtactatcaa
      961 ggaaaacgag atccaaaagt tttgtcaaaa aagttaccca tggctccgat acatgaggca
     1021 tgtggaatag tagttgctga tcctacaggt acctatcagg ttggccaaaa agttgcaatg
     1081 attccaaacc aaccaccttg tgctagtgat gaagtatttt tcgaaaatta tcgctcaggt
     1141 acctattttt tatcaagtgg ttatgatggt tttatgcaag aaacaatctc attaccggta
     1201 gacagaacag ttccttacga tagtattcca gatgaaattg cagcactttc agaatttact
     1261 agtgtcgcta tgcatgctat taatcgattt gacaatattg ctcatcatat tcgtgaagat
     1321 gttttagtac tcgctgatgg gagcctagca tttgttttag ctagtgcctt gcactttctg
     1381 tatcctgaaa ttcgtattac ggttgttgga agaaatcccg agaagctacg tctatttaat
     1441 tttgtttatg caacgtattt aactaatgaa atcccagctg acttaaaatt tgatcacgca
     1501 tttgaatgtg ctggaggaca aggaagtgag ccagctatca atgacattat tgaccttata
     1561 aagccacaag gaacaattat gttaatgggt gttagtgata ataaaattgc aatcaataca
     1621 cgtgatattt tagaaaaggg tttgactgtg gtaggttctt cacgctcagg aagggaagat
     1681 tttattaagg cagtagaaat gttgtcaaat cgcagagttc aaagccagat gagacacatt
     1741 atatttgaag aagaggctgt aaattctgtt gaagacattc atagggtatt tgcaacggac
     1801 ttgactactt ctttcaaaac agtttttaag tgggatgttt aattaatttg tcaaaggtga
     1861 agcaaaatta tttttcctct ggtaaattct caaagtaagc tctagttccc gtccatctag
     1921 aagttacact gagacaactg tataacatca acagaattta gtctcagact aagttctgtt
     1981 tttgactaaa aatggtaacc gcccaataac aaggtacctt tctatcctcc ccctcctcca
     2041 gtatactgtt ataaaaaagc aataaaaatc cgttttttaa agttttcatc ttcctgaaac
     2101 caaaggcatt tcgcttaatg actttgatga gattattggt agcttctggt ttggcgttgg
     2161 aataaggcaa ttctaaatta gttaagtaca tccgaaacat ggaaggttag ctttgtttat
     2221 cctgtgccct atttcagatg gtaattttta aaacaggata aaagcccatt ttttcaggct
     2281 taggtcaagt aatcatagca ttaatctgga caaactttag tggacatctt tagatgttgc
     2341 tggagagaaa tatcttatag ctagtgtaaa aaccacccat tttcaagggt ggctatgatt
     2401 tatgtacgaa gtaatggtgt gatttggtta agagggttgt gctcacttag aatttctacc
     2461 tgcttacttt gagagacatg agtgtagatt tgtgtcacat tgatgttact gtggcccagt
     2521 aaatgttgta tttgtcgaat atcgacgcca ttatcaagta acatagttgc aaaactatgt
     2581 cgaaacatat gtggagtaat ctgttttttc agttgtagtg agtgagaaat attttttaga
     2641 attaagcgca cactttgttc tttaagatga ttatcgtttc ttgcaccggt aaatagatag
     2701 ctagaatgat tgcaatgatg cgttatatag tcctcaagta atgaaaatgt ttcatcgttt
     2761 ccaatataga gtaatcgctc tttctttcct tttccgagta tatgaatggt tctattttcc
     2821 aaattgatat tatcgagttt taaactacat aattcagaga tgcgtagacc tgttgataaa
     2881 agtagcgaga taaggagtag atttcgaatt gctttccgtt tagaatgttt atttttagaa
     2941 ttttctactt gttggtgggc aaaacaatat attttttgta aatctttcaa ggaaatcgtt
     3001 ttaggaagct ttttctcttc tttataatat agtcggagtt gatggaaggg attttttgag
     3061 attagttttt cttcttccag aaaattatag tatgatttaa gactagcaac ctttcgtttt
     3121 aacgtgctag tcttttttat atgttgatta agaaaagtaa gataggactt aatgtcattg
     3181 gtcccaaagt tatgatattg atgtaaatca gatttgtatg ctcggatagt atgagaacta
     3241 agtcgccttt gaatagtgca aaagtcaaga tatct
//
LOCUS       DBNFCX010000153         3269 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.154, whole genome shotgun sequence.
ACCESSION   DBNFCX010000153 DBNFCX010000000
VERSION     DBNFCX010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3269)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3269)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3269
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.154"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..1658
                     /locus_tag="AC1PJC_002164"
     CDS             <1..1658
                     /locus_tag="AC1PJC_002164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621128.1"
                     /translation="RKLFVFAWLALVLEMLIYYWYQLPALNILSVDFWIFFLQSVGLV
                     WLILSMFSSKGAFQKVTKISGRQRQVDTYQIKTSQLPAYLKWLGRIWVLAVLGLLGLG
                     LINSRVFRAKDYAAVISVKDADFKADFPETDISKLALLDRASAEKIGDTYLGTIDKVS
                     QFGISDDYRQITIGQQPFRVSPLEYKNFWKWLSNHQDGIGYYVKVNQTTGKAELAKLS
                     KAMHYSDSEFLLNDTLRHLRLQYPTTIFGKPSFEVDDQGNPYYIATIYEPKFGLSSND
                     PIGAIVLDAVTGESKKYSLEDIPEWVDRVYSANNVISRVDDHYTYQNGFWNTIFSQTG
                     VKNTTDSYNYISIGSDIYLYTGITSATADSSNLGFILVNMRTREITNYKLASATETAA
                     QESAEGEVQEKGYKATAPSLVKLADTAYYLVSLKDDAGLVKSYALVDAEDYQQVTVNN
                     DIALLISQVTGTDASSLSGLTVTENGEVGEQTEVISGKVEALASQIIGGATIYYIESE
                     GKIYKVKATEDSTDRLPFIKVGDHFSGQLDKKNYLKNFKVNPE"
     gene            1818..3206
                     /locus_tag="AC1PJC_002165"
     CDS             1818..3206
                     /locus_tag="AC1PJC_002165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HIP6621129.1"
                     /translation="MSLFRKKQAVGRHSQMRRHLGLVDLIFLGIGSMVGTGIFTVTGL
                     AAAQYAGPALIISIVIAAISVGLTALFYAEFASRIPTNGGAYGYLYSVFGEFPAWIAG
                     WLTIMEFLTAVSSVASGWGAYLKGLLANFGIAMPTALNGTFNPAAGTYVDLLPVLVLI
                     FVVGVVLLNSKAALRFNSALVVLKFSALALFILVGLFFIKPENWSNFSPFGFGTIYGG
                     QAGIMAGASLMFFAFLGFESISLAIDEVKKPEKNVPKGIVLSLSIVTILYIVVTLVLT
                     GMVHYTKLNVADAVAFALREVGLDWAASYISIVAILTLITVCISMTYALSRMVYSISR
                     DGLLPKSLSRLTQTSKVPKNATILVGIFAAICAGIFPLASIASFLNICTLAYLIMLAL
                     GIIRLRQVEGLPKDGQFKTPLVPLLPILSIIICLSFMFQYSLDTWLAFGVSLVIGILI
                     YFCYGYRHSEAK"
BASE COUNT          881 a          601 c          724 g         1063 t
ORIGIN      
        1 aaagaaaatt atttgttttt gcctggttag ccctagtttt ggaaatgcta atctactact
       61 ggtaccagtt gcctgcttta aatattttga gtgtggactt ctggatattt ttccttcaat
      121 ctgtcggatt ggtttggctc atactttcca tgttcagctc caaaggtgct tttcaaaagg
      181 tgaccaagat ttccggtcgc cagagacaag tagataccta tcagattaaa acctcgcaac
      241 tgccagctta cttaaaatgg ttgggacgaa tttgggtatt ggctgtcctg ggtttgttgg
      301 ggctggggct tatcaactca cgtgtatttc gtgctaagga ttacgctgct gtcataagcg
      361 tcaaggatgc ggattttaaa gcagattttc ctgaaacaga catatccaaa ttggccctcc
      421 tagatcgtgc ctcagccgaa aaaatcggtg atacttatct aggtaccatt gacaaggtct
      481 cccagtttgg catttcggat gattatcgcc agattactat cggtcagcaa ccgttccgtg
      541 tatcgccttt agaatataag aatttttgga aatggctgag caaccatcaa gatgggattg
      601 gttactacgt gaaggttaat cagacaacag ggaaggcaga acttgccaag ttgagcaaag
      661 ccatgcacta ttcagattcc gaatttttgc tgaatgatac cttacgtcat cttcgcctgc
      721 aatacccgac aactattttt gggaaaccat ccttcgaagt ggatgaccaa ggaaatccat
      781 attatattgc aacgatttac gagccaaaat ttgggctttc atcaaatgat ccgattggtg
      841 ctattgtatt ggatgcagta acaggggaaa gtaagaagta tagtctggaa gatattccag
      901 agtgggtaga ccgtgtttat tcggcaaaca atgttatcag ccgtgtagat gaccactata
      961 cttatcaaaa tggtttctgg aataccattt tcagtcaaac tggtgtgaaa aatacaacag
     1021 acagctataa ttatatttct atcggctcag atatttatct ctacacaggt atcacctcag
     1081 caactgctga ttcatccaac cttggattca ttcttgtcaa tatgagaact cgtgaaatta
     1141 ccaactacaa attggcttcg gcgactgaaa cagcagcgca agagtccgca gaaggtgaag
     1201 tgcaggaaaa aggctataaa gccactgctc caagcctagt taagttggca gatacagcct
     1261 actatttagt atccttgaaa gatgatgccg gcttggttaa atcatacgct cttgttgatg
     1321 ccgaagatta tcaacaggtt actgttaaca acgatattgc gctcttaatt tctcaagtca
     1381 caggaacgga tgcttctagc ctttcaggat tgacggtgac tgaaaatgga gaagttggtg
     1441 aacagactga ggttatcagt ggaaaagtag aagctttagc gagtcaaata attggcggtg
     1501 cgacaatcta ctatattgag tctgagggca agatttacaa agtcaaagca acggaagata
     1561 gtacagatcg attaccattt atcaaagtag gagatcactt tagcggtcag ttagataaga
     1621 aaaattatct taaaaacttt aaggttaatc cagaataatc ataagaaaga gtgaggtaga
     1681 aaagccttgc tcttttgctt gtcgtcaccc atgcgaaata tttcaactta tggtataatg
     1741 gggcgttgtg gttctttgac aggaatccgt agattattct gtcgagtatc catattctta
     1801 ttctgaagga gtattttgtg agtttattta gaaaaaaaca agcagtcggt cgccatagtc
     1861 aaatgcgtcg gcatttaggc ttagttgatt tgatattttt aggtatcggt tcgatggttg
     1921 gaacaggtat ctttacggta actggtttgg cagcagccca gtatgcaggg ccagctctaa
     1981 tcatctcaat tgttattgca gcaatttcag tcggactaac agccttgttt tacgcagaat
     2041 ttgcctctcg tataccgact aacggtggtg cctatggtta tctctactcg gtttttggtg
     2101 aatttcctgc ctggattgct ggctggctga cgatcatgga attcttgact gctgtatcga
     2161 gtgttgcatc tggttgggga gcttatttga aaggactcct ggctaatttt ggtatcgcta
     2221 tgccgacagc tctgaatgga acttttaacc ccgctgcagg tacctatgta gacctcttac
     2281 cagttctcgt cttgattttt gtggtaggag tggtcttgct taattctaag gcagctcttc
     2341 gtttcaattc agccttggta gttttgaaat tttcagcgtt ggctttattt attttagtag
     2401 ggttattctt tatcaaacca gaaaactggt cgaacttctc tccttttggt tttggtacca
     2461 tttatggtgg acaggcagga attatggcgg gagcgtctct catgttcttt gccttcctgg
     2521 gatttgagtc tatttcatta gcgattgatg aggtgaaaaa acctgagaag aatgtaccaa
     2581 agggaatcgt gttgtctcta tccattgtaa caattcttta tattgtagtg acattagtat
     2641 tgactggtat ggttcactat actaagttga atgtggcaga tgcggtagcc tttgcacttc
     2701 gagaagttgg attggattgg gcagcgagtt atatttctat tgtagcaatc ctaacattga
     2761 ttacagtatg tatttcgatg acctacgcct tgtcgagaat ggtctattcc atcagtcgtg
     2821 atggtttgct accgaaatca ttgagccgat taacacaaac aagcaaggtt cctaagaatg
     2881 cgaccattct tgtggggatt tttgcagcta tttgtgcagg tattttccca ctagcaagta
     2941 ttgcttcctt cctcaatatc tgtaccttag cttatttgat tatgctggcg ttgggtatta
     3001 ttcgtctgcg tcaagtcgaa ggtttgccaa aagatggaca atttaaaaca cctcttgttc
     3061 ccttgttacc tatcctctcg attatcattt gtctttcatt tatgttccag tatagtttag
     3121 atacttggtt ggcattcgga gtatcattgg ttattggaat tttgatttac ttctgttatg
     3181 gatatcgtca ttcggaagca aaataataga tttcccttct ttatttgaag ggattttttg
     3241 tacaattttt ttatagaaat aatggaaaa
//
LOCUS       DBNFCX010000154         3225 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.155, whole genome shotgun sequence.
ACCESSION   DBNFCX010000154 DBNFCX010000000
VERSION     DBNFCX010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3225)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3225)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3225
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.155"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(44..1297)
                     /locus_tag="AC1PJC_002166"
     CDS             complement(44..1297)
                     /locus_tag="AC1PJC_002166"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006486 - protein glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HIP6621130.1"
                     /translation="MKRILFISPTTSMDNGAEKSIYYLMKYLIQLGHTVINVTHAIGG
                     EPQDKHEQLYKIIGVKNYYLPTIKWWWPDAPGGEILNREEATSYYRQNVQDIAEIIEQ
                     NEIDLVISNTVNVFQGAIAASCQKVPHFWLIHEFPKNEFAYYADKIDFIEEYSSELFS
                     VTGELNNFLTLLFNKKVHSFISYTEQETKVLKKGNQVRIVSVGRLTEGKNQLELIKAY
                     KTLNRLDIELVFIGGWDSKYKAICDEYIHENKLQKNVKFLGNLDNPWEEVTDRDICVF
                     PSSMETFGLVYVEAILRGLPVILSDNLGHLTAFEIFSAGQIYKLGDIEELVTKLEQVI
                     ESFRNFSDRAQLDVERLRTLYTPEVAYKEILDGINHLEYTGHQNTNLSHIKELLTLNM
                     RPTRLERYARLISNMATKIRHKLRL"
     gene            complement(1297..>3225)
                     /locus_tag="AC1PJC_002167"
     CDS             complement(1297..>3225)
                     /locus_tag="AC1PJC_002167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnan synthesis F family protein"
                     /protein_id="HIP6621131.1"
                     /translation="PKYIKRTLLALQRDKQRRNNYSDIKNRYLIYTIYEHQSSLQDYK
                     VIFLEALAKISRDVLIVVNGKLPQADINRLAQYGKVLERENEGYDVAAFRHGIIHTGK
                     EALQQYNQLILVNDTNIGPFRDLEEVFSEFNSDQLDFWGISMGEEQLDFTGYNPYGKI
                     PKHLQSYFVVIENSLLRYEGFYDYWEKLSDTDSRNKAIGKHETVFAKYFYDRGFKYDA
                     LIKDTKDSALYIHPLKLLKQGCPLVKYSAFRNYDREQYFWHGLERESEIPDLMEYIAK
                     ETDYPIEVVSSILEDFKTRENQSYILIIDGVENIIPQCTRYRVLNKAEQLRELGYTVR
                     VINNSLVQLQDAQFASHIIIYRAPFNDMLKEICRAAHIKNRPVYFDIDDLVFDTKFTD
                     ELEFTQGLSKREKKGYDTSVLAYKKMLSLCDYAITSTSKLKDELEQYKNKVILNRNVM
                     SKELVERSLQVKKNSNDNKVKIGYFSGSITHNENFDLISQALLHLLQKYPQVELHIVG
                     YLDIPKPFQKFKKQIVSHEYVDWRKLPILISQVDINLAPLVTTTFNEAKSEIKWIEAA
                     AVKVVTVASNLGAFEEMIQDGVTGVLADDNEWESKLERLILEQDLRAQIAENAFEFVM
                     NHCTTANRINDFLKEELV"
BASE COUNT         1019 a          633 c          438 g         1135 t
ORIGIN      
        1 aactataata atacatattt taacatagat atcctattat ccatcaaagt cgaagtttat
       61 gtctgatttt tgtcgccata ttgctaatca atcttgcata acgctccaac cttgttggac
      121 gcatatttaa agtcagtaac tcttttatgt gacttaaatt tgtattttgg tgtccagtat
      181 attctaagtg attgatgccg tccagtattt ctttataggc aacttccggt gtatatagag
      241 tacgtaaacg ttccacatca agctgagccc tatctgaaaa atttctaaag gattcaatca
      301 cttgctctaa cttagtcacc aactcttcta tatcgcccaa tttataaatt tgacctgctg
      361 agaatatttc aaatgccgtc aaatgtccta aattatctga tagaattact ggaagccctc
      421 ttaagattgc ttcaacatag actaagccaa aagtttccat agatgaaggg aaaacacaga
      481 tatctctatc agttacttct tcccaaggat tatctaagtt acctaaaaat ttaacatttt
      541 tctgtaattt attttcatgg atatattcat cacaaatagc tttgtattta ctatcccatc
      601 ctccaataaa aaccaattca atatctaatc tatttagtgt cttatatgct tttataagtt
      661 ctaattgatt ttttccttct gttaatcgac caacagaaac aattctaact tgattgcctt
      721 tttttaaaac ttttgtttct tgctcagtat aagaaataaa cgaatggact ttcttattaa
      781 atagtagtgt taaaaaatta tttaactctc cagtcacact aaataattct gaagaatact
      841 cttctatgaa gtcaatttta tcagcataat aagcaaactc atttttagga aattcatgaa
      901 ttagccagaa atgaggaacc ttttgacatg aggcagcaat tgctccttga aaaacattaa
      961 cagtatttga aataaccaag tctatctcat tttgctcaat aatttcagct atgtcttgaa
     1021 cattctggcg atagtagctt gtagcctctt ctctattaag gatttctcca cctggtgcat
     1081 ccggccacca ccacttaata gttggcaaat agtaattctt aacccctatt attttataaa
     1141 gttgctcatg cttatcttgt ggttcccctc ctattgcatg agtaacattt ataactgtgt
     1201 gtcccagttg aataaggtac ttcattagat aataaataga cttctccgca ccattatcca
     1261 tactagtcgt aggagaaata aacaaaatac gtttcattag actaactctt ctttcaaaaa
     1321 atcattaatt ctatttgctg tagtgcaatg attcattaca aactcaaaag cattttctgc
     1381 tatttgtgct ctcaagtctt gttcaagaat caatctctcc aatttacttt cccattcgtt
     1441 atcatctgct agaactccag tcactccatc ttgaatcatc tcttcaaatg ctccaagatt
     1501 acttgcgact gtcacaactt taactgctgc cgcttctatc catttaattt ccgactttgc
     1561 ttcattaaag gttgtggtta caagcggcgc caagttaata tcaacttgtg aaattaaaat
     1621 tggaagcttt ctccaatcaa catactcatg actcacaatc tgttttttga atttttggaa
     1681 tggtttcgga atgtctaaat atcctactat atgtaattcc acttgcgggt acttttgaag
     1741 taggtgtagc aatgcttgac taattaaatc aaaattttcg ttgtgtgtaa ttgaccctga
     1801 gaaatatcct attttaactt tattgtcgtt cgaatttttc ttaacttgta aactacgctc
     1861 aactaattct ttagacatga cgttgcgatt caagataacc ttgtttttat attgttcaag
     1921 ttcgtctttc aatttcgaag tcgatgtgat agcataatcg cagagagaaa gcattttttt
     1981 gtaagccaag acacttgtat catagccctt tttctctctc ttgctcaagc cttgggtaaa
     2041 ttcaagttca tctgtaaatt ttgtatcaaa aaccaaatca tcaatatcaa aataaacagg
     2101 tctgttcttt atgtgtgctg ccctacatat ttctttcagc atatcattga atggagcacg
     2161 ataaataata atatgactag caaactgtgc atcctgaagt tgtacaagag aattatttat
     2221 cactcgaact gtataaccaa gttctcgcaa ttgctcagcc ttatttaaca cacgataacg
     2281 tgtacattgt ggaataatat tttcgacacc atcaataatc aaaatataag attgattttc
     2341 tctagtttta aaatcttcta atatagaaga caccacttca atcggataat ctgtttcctt
     2401 agcaatatac tccatcaaat ccggaatctc agattctctt tctaaaccat gccaaaaata
     2461 ttgttctctg tcataatttc taaaggccga atacttaact aatggacaac cttgttttaa
     2521 taatttaagc ggatgaatat acaatgcact atctttcgtg tctttaatca atgcatcgta
     2581 cttaaagcct cgatcataaa aatattttgc aaacacagtt tcatgtttcc caattgcctt
     2641 attacgagaa tccgtatcag agagcttttc ccaataatca taaaatcctt catacctaag
     2701 caagctattt tcaataacaa caaaatatga ttgtaagtgc ttaggaattt taccataagg
     2761 gttataacca gtaaagtcta gttgctcctc acccatggaa attccccaaa agtctagctg
     2821 atcggaatta aactcagaga aaacctcttc taaatctcta aaaggaccaa tattcgtatc
     2881 attaaccaag atgagctgat tatactgttg taacgcctct tttccagtat gtattatccc
     2941 atgtcggaaa gccgcaacgt catacccctc attttctctt tccaaaacct taccatattg
     3001 tgctaaacga tttatatcag cctgtggaag tttaccattt acaacaatta aaacatctcg
     3061 agaaatttta gccaatgcct ctaaaaaaat tactttatag tcctgtaaag acgattgatg
     3121 ttcataaatt gtgtaaatca agtaacgatt tttgatatct gaataattat ttctacgttg
     3181 tttatcacgt tgcaaagcta gtagagttcg ctttatatat tttgg
//
LOCUS       DBNFCX010000155         3222 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.156, whole genome shotgun sequence.
ACCESSION   DBNFCX010000155 DBNFCX010000000
VERSION     DBNFCX010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3222
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.156"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            208..1581
                     /gene="mnmE"
                     /locus_tag="AC1PJC_002168"
     CDS             208..1581
                     /gene="mnmE"
                     /locus_tag="AC1PJC_002168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002906470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HIP6621132.1"
                     /translation="MITKEFDTITAISTPLGEGAIGIVRLSGTDAFAIASKVFKGKDL
                     ATVPSHSLNYGHIIDPATGQVLDEVMIGAMRSPRTFTREDVIEINTHGGIAVTNEILQ
                     LLIRQGARMAEPGEFTKRAFLNGRVDLTQAEAVMDVIRAKTDKAMHNAVRQLDGSLSQ
                     LINDTRQEILNTLAQVEVNIDYPEYDDVEEATTELVREKTLQFQALLENLLRTARRGK
                     ILREGIATAIIGRPNVGKSSLLNNLLREEKAIVTDIAGTTRDVIEEYVNIKGVPLKLI
                     DTAGIRETDDIVEKIGVERSKKALEEADLILLVLNASEPLTEQDRNLLAISDLANRIV
                     LLNKTDLEEKIEADQLPEDVIRISVLKNQNIDQIEEKINQLFFENAGLVEQDTTYLSN
                     SRHISLIEQAVQSLQAVNDGLEMGMPVDLLQVDLTRCWQILGEITGDAAPDELITQLF
                     SQFCLGK"
     gene            1785..2861
                     /locus_tag="AC1PJC_002169"
     CDS             1785..2861
                     /locus_tag="AC1PJC_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621133.1"
                     /translation="MKKMIIALLAAFCLIFSFIAWKLETYQHAKVELDSNADFYLIYP
                     GKIEAFQLSNDQPKLIHTQKMNSDNYFGSGKNHILDNQSLVFANDQQKFTNDNLVYID
                     FKTGEILRKPSKYATYISGTDGQHFYTAGPFHALSQFDNTFKLKNQLKLDDDFFPLPY
                     VYADDTFIYLNGNQMTTGQSDSQKNVLYIIDKTSFTTSDIVEYDKNLVTHEGLLAKDT
                     LYLPITSHHALDYKDIETSYDILTFNTKTRTFSSITLSQPAPGSIQPLKEDNLLFIEH
                     ESDWLSAISFTIYNTQTGQESYHRLDELNPRPYYIDHVRQLDGNRLLLILAGKALIYD
                     WQAKKVLSQIILSEDYVSGVWVND"
     gene            complement(2984..>3222)
                     /locus_tag="AC1PJC_002170"
     CDS             complement(2984..>3222)
                     /locus_tag="AC1PJC_002170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621134.1"
                     /translation="ELKLSKALKFQLLEAMELCEKGSKISYLSYKIYPCVSEELALNR
                     IQSDKLKMFKRYLEQERWKYYFGSALGMAFTSIR"
BASE COUNT          997 a          777 c          568 g          880 t
ORIGIN      
        1 ttaaattttt atgtttctat tataacatag tcaacctaaa ttaatagcaa cactttctgt
       61 atttctatca aattatcttc tcaaattaat tactatattt attgccctct caatacattt
      121 ctgcactccc catccctcat ctgtgctttt ttcttcattc catgatacac ttataagtaa
      181 gattttttag ttagaaagca cattattatg atcaccaaag aattcgatac aataactgcc
      241 atttcaactc ctctcggtga gggggctatc gggattgtcc gcctgtctgg gacggatgca
      301 tttgctattg ccagcaaggt tttcaagggt aaggatttgg cgactgttcc tagccacagc
      361 ctcaactacg gccacattat tgaccctgcg acagggcaag tgcttgatga ggtcatgatt
      421 ggggccatgc gttccccacg caccttcacg cgcgaagatg tcatcgagat taatacccac
      481 ggaggcatcg ccgttaccaa cgaaatcctt caactcctga ttcgccaagg tgctcgaatg
      541 gctgagccgg gcgagtttac caagcgtgcc tttcttaacg gccgtgtgga tttgacccag
      601 gcagaggccg tcatggatgt catccgtgcc aagaccgaca aggccatgca caatgccgtc
      661 cgccagcttg acggctccct ctcccagctc atcaacgaca cccgtcagga gattctcaac
      721 acactagcac aggtcgaggt caacatcgac taccctgagt acgacgacgt cgaggaggcg
      781 acgacagagc tggtccgcga gaaaaccctc cagttccaag cccttttgga aaatctcctc
      841 cgaactgccc gccgtggaaa aatcctgcgt gaaggcatcg caaccgccat tatcggtcgt
      901 ccaaatgtgg gaaaatccag cctgctcaat aacctcctcc gcgaagaaaa agccatcgtt
      961 acagacatcg caggaacaac acgcgacgtt atcgaagaat acgtcaacat caaaggtgtc
     1021 cccctcaagc tgattgatac cgcaggtatc cgtgaaacag atgacatcgt tgaaaaaatc
     1081 ggtgtggaac ggtctaaaaa agcccttgag gaggccgacc tcatcctact agtcctcaac
     1141 gcatccgagc cactgaccga acaagaccgc aacctcctag ccatttcaga cctggccaac
     1201 cgcatcgtcc tgctcaacaa gaccgatttg gaagagaaga ttgaagcaga ccaactgcct
     1261 gaggatgtca ttcgcatttc cgtcttgaaa aaccagaaca tcgaccaaat cgaagaaaaa
     1321 atcaaccagc tcttctttga aaatgctggt ctggtagagc aagataccac ctacctctcc
     1381 aattctcgtc atatttccct gattgagcaa gccgtccaaa gcctacaagc tgtcaatgac
     1441 ggtctggaaa tgggcatgcc cgtagacttg ttacaggttg acctgacacg ctgttggcag
     1501 attttaggag aaatcacagg tgatgctgct ccagatgaac tcattaccca actctttagc
     1561 caattctgtc ttggaaaata gaaagaggct aggcaagtct taaaaataga aaatagctta
     1621 gaattacgtc gtaagaaacc gtgattctaa gctattttta atgattcaaa ttgtgattga
     1681 agacgaaagg ttcagttttt tcacgctttt tgtatattaa cagattaaaa cttgtccttc
     1741 tctaaaaaat aaactatact atggatagaa aggaggctta ccctatgaaa aaaatgataa
     1801 tcgctttact tgccgctttt tgccttattt tttcctttat cgcttggaaa ttggaaacct
     1861 atcaacacgc caaagtagaa ctcgattcaa atgctgactt ctatctcatt tatccaggta
     1921 aaatcgaagc ctttcaatta tctaatgacc agccaaagct cattcacact caaaaaatga
     1981 attcggacaa ctatttcggc tctggaaaaa atcacattct agacaatcaa tctttagttt
     2041 ttgccaatga ccagcagaaa tttaccaatg acaatttggt ttatattgat ttcaaaacag
     2101 gagaaattct tcgtaagcca agcaaatacg ctacctacat cagcggaact gatggacaac
     2161 atttttatac agcaggtcct ttccatgcct tatcacagtt cgataatacg ttcaaattaa
     2221 aaaatcaatt aaaactagat gatgattttt tcccgcttcc atatgtctat gcagatgata
     2281 cattcattta tttaaacggc aatcaaatga ccactggtca atcagattct caaaaaaatg
     2341 ttctctatat catcgataaa acaagcttta caacatcaga tatagtcgaa tatgacaaaa
     2401 atctagtaac tcatgaagga ctccttgcaa aggatacact ctatcttcca atcactagtc
     2461 accatgcttt agattacaag gatattgaga cttcctatga tattttgacc ttcaatacaa
     2521 agacacggac attttcctcc ataaccttat cacagcctgc accaggaagc atccaaccac
     2581 tcaaggaaga taacctatta ttcattgagc acgaaagcga ttggctatct gcaatctctt
     2641 tcaccattta taatacccaa acaggtcaag agagctacca tcgtctagac gagcttaatc
     2701 ctcgtcctta ttatattgac catgtccgcc aactagacgg taacagatta ttattgattc
     2761 tggctggtaa ggcactcatc tatgactggc aagcaaaaaa agttttaagc caaatcattc
     2821 tatctgagga ttatgtcagc ggggtgtggg taaatgactg ataaacaaaa acgaatctca
     2881 atcaaagatt gtaaaagtcc caagattact ctttcttggg actttctcat attctatcga
     2941 agttgcacag cacaatcaat gtacttacaa atcctcagaa ccactatcta atcgaagtaa
     3001 acgccattcc caaagcagaa ccaaaataat atttccacct ttcttgctct aaatagcgct
     3061 taaacatctt taatttatcc gattgaatcc tattcaaagc tagttcttcc gatacacatg
     3121 gatatatttt ataggaaaga tagctaatct tactaccttt ttcacacaac tccattgctt
     3181 ccaacaactg gaatttcaat gctttgctca actttaattc tg
//
LOCUS       DBNFCX010000156         3212 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.157, whole genome shotgun sequence.
ACCESSION   DBNFCX010000156 DBNFCX010000000
VERSION     DBNFCX010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3212)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3212)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3212
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.157"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(57..371)
                     /locus_tag="AC1PJC_002171"
     CDS             complement(57..371)
                     /locus_tag="AC1PJC_002171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3270 domain-containing protein"
                     /protein_id="HIP6621135.1"
                     /translation="MALRHYQSHEYQYEEYIPKEKKANFQTYQAKNTNKERLMELLFF
                     VNIAFFSLITVIASYVYLSVGIPVFVAIILASATGFLGLRLVQIGLKKKFKPKQVIRK
                     NE"
     gene            532..1461
                     /locus_tag="AC1PJC_002172"
     CDS             532..1461
                     /locus_tag="AC1PJC_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012997850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase U32 family protein"
                     /protein_id="HIP6621136.1"
                     /translation="MEKIIITATAESIEQVKELLAAGVDRIYVGEEDHALRIPTNFTY
                     DELREIAELVHSAGKELTVAANALMHQDMMDNIKPFMELMREIKVDYLVVGDTGIFYI
                     NKRDGYNFKLIYDTSVFVTSSRQINFWKDHGAVEAVLAREIPSEELFDIAKNLEMPAE
                     ILVYGASVIHHSKRTLLQNYYNFTKADETDLSRGRGLFLAEPSDPDSHYSIFEDKHGT
                     HIFINNDIDMMTKLSELDEHGYHNWKLDGIYCPGQNFVEIVKLFVQARDLIEKGDFTY
                     DQAFLLDEQVRKLHPAERGLDTGFYEFDRNKVK"
     gene            1759..3045
                     /locus_tag="AC1PJC_002173"
     CDS             1759..3045
                     /locus_tag="AC1PJC_002173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018377161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase U32 family protein"
                     /protein_id="HIP6621137.1"
                     /translation="MLKTLKRPEVLSPAGTLEKLKVAIDYGADAVFVGGQAYGLRSRA
                     GNFTMDEMREGIEYAHARGAKVYVAANMVTHEGNEEGAGAWFRELRDMGLDAVIVSDP
                     ALIVICATEAPGLEIHLSTQASSTNYETFEFWKELGLTRVVLAREVTMEEVAEIRKRT
                     DVEIEAFVHGAMCISYSGRCVLSNHMSKRDANRGGCSQSCRWKYNLYDLPFGEERRSI
                     KGEIPEEFSMSAVDMCMIDHIPDMIENGVDSLKIEGRMKSVHYVSTVTNCYKAAVDAY
                     LESPEKFEAIKQDLIDEMWKVAQRELATGFYYSPPSENEQLFGARRKIPEYKFIAEVV
                     AFDKETMTATIRQRNVINEGDQVEFYGPGFRHFETTIQDLHDSNGEKIERANKPMELL
                     TIKLDREIYPGDMIRACKSGLINLYQEDGQSLTIRA"
BASE COUNT          949 a          652 c          703 g          908 t
ORIGIN      
        1 ctaggtgtta gcttttcgtc tacccactac agttgacaaa gagcccttta tattcattat
       61 tcattttttc ttataacttg tttgggttta aatttcttct ttagcccaat ttgaaccaaa
      121 cgtagtccaa gaaaacccgt cgcacttgcc aatatgatgg caacaaaaac aggaatgcct
      181 acggatagat agacataact agcgatgact gttatcaaac taaaaaatgc gatattaaca
      241 aaaaacaaca attccattag acgttcttta ttggtatttt ttgcctgata ggtttgaaaa
      301 ttagcctttt tctctttcgg gatatactct tcgtactggt actcatggga ctgatagtgt
      361 cttaatgcca tatcgtctcc ttttctgctc cttaaagaat accataacat tgctgaattt
      421 ttatgtcatt tatattacaa taatgttaca agagaaagat tagaaaagtc tgaacattaa
      481 aatacaggta gtcacttatc agatatttct ctttttgata taattatctt tatggaaaaa
      541 attatcatta cagcaacagc tgaaagtatt gagcaggtca aagaactgct tgcagcagga
      601 gttgaccgta tttatgttgg ggaagaggat catgcccttc gcattccaac aaattttacc
      661 tatgatgaac ttagggaaat agcagagcta gttcatagcg ctgggaagga attgacggtc
      721 gctgccaatg ccctcatgca ccaagatatg atggacaata tcaaaccgtt tatggagcta
      781 atgagggaaa tcaaggttga ttatctggtt gtcggagata ctggaatttt ctacatcaat
      841 aaacgtgacg gctacaattt caagctaatc tatgatactt ctgtctttgt gacttccagc
      901 cgtcagatta acttttggaa agatcatgga gcagtagagg ctgttttggc aagagagatt
      961 ccatcagaag aactctttga tattgctaag aatttggaaa tgccagcgga aatcttggtc
     1021 tacggcgcct ctgttattca ccattctaaa cgaaccttgt tacagaatta ctacaatttt
     1081 acaaaggctg atgagacaga tttgtcacgt ggacgcgggt tgttcttggc agagccgagc
     1141 gacccagata gccactattc tatctttgag gacaagcacg gtacccatat ctttatcaac
     1201 aatgacattg atatgatgac caagctatca gaattagatg aacatggtta tcataattgg
     1261 aaacttgatg gtatctattg ccctggtcag aactttgttg aaattgttaa gctttttgtt
     1321 caagcaagag atttgattga aaaaggcgac ttcacttatg atcaggcctt ccttttggat
     1381 gaacaggtac gcaagctcca tccagctgaa cgtggcttgg atacaggctt ctacgaattt
     1441 gaccgcaata aggttaaata acaacatttt tagcacaatt tatttacttt aacctggcag
     1501 agttagctct gtcacttact atgtaaggtc agagcacgaa aatgcctttg ggcgattttc
     1561 taaactctgc cctaggtttc cgagtgaaac aacatcgttt acagtattct atcctggcag
     1621 agttagctct gtcacttaca atgtaaggtc agagcacgaa aacgcttttg agcgattttc
     1681 taaactctgc cctaggtttc cacatggaaa agtatcgttt catgtggaaa ccgtcgcaaa
     1741 tagaggagat tttacatgat gttaaaaaca ttaaagcgtc ccgaggtctt gtcacctgct
     1801 gggactttgg agaaattgaa ggtagccatt gattatggtg ctgatgcggt ctttgttggc
     1861 ggccaggcct acggtctgcg tagccgagct ggtaacttta ccatggacga gatgcgggaa
     1921 ggaattgaat atgcccatgc ccgtggtgcc aaggtctatg tagctgccaa catggtcacc
     1981 cacgaaggta atgaagaagg agcaggagcc tggttccgtg aattgcgtga catgggcttg
     2041 gatgccgtta tcgtatctga cccggctctc atcgttatct gtgctactga agcgccaggc
     2101 cttgaaatcc acctgtctac ccaggcttca tcaaccaact atgagacctt cgagttctgg
     2161 aaggaattgg gcttgactcg tgtcgtcctg gcccgcgaag tgactatgga agaggtggct
     2221 gaaatccgta aacggacaga cgttgaaatc gaagcctttg tccacggtgc catgtgtatc
     2281 tcctactcag gtcgttgcgt tctctccaac cacatgagca aacgcgatgc caaccgtggc
     2341 ggctgctccc agtcttgccg ttggaagtac aacctctacg acctcccatt tggtgaagaa
     2401 cgccgttcga ttaaggggga aatcccagag gagttctcca tgtctgcagt ggacatgtgt
     2461 atgatcgacc atattccaga tatgattgaa aatggggtcg atagcctgaa aatcgaaggc
     2521 cgtatgaaat ctgtccacta cgtatcaaca gtgaccaact gctacaaggc tgcggtagat
     2581 gcctatcttg aaagcccaga aaagtttgaa gcaatcaagc aagacctgat tgatgagatg
     2641 tggaaggttg cccaacgtga attggcgaca ggtttctact atagcccgcc gagtgaaaat
     2701 gagcagctct ttggagcccg ccgtaagatt ccagaataca aattcatcgc cgaagtagtg
     2761 gcttttgaca aggaaaccat gactgcaacc attcgtcagc gtaatgttat caacgaaggt
     2821 gaccaagtag agttttacgg accaggtttc cgtcattttg aaacgactat tcaggacttg
     2881 catgattcaa atggagaaaa gattgaacgt gccaacaagc cgatggaact cttaactatt
     2941 aagctggacc gtgaaatcta tcctggtgac atgattcgtg cctgcaaatc aggcctcatc
     3001 aacctctacc aagaagatgg gcaatctcta actattcgtg cataaacata aaaaggccga
     3061 aatttcagct tcagaacgta gataaactct taaaaatata aaagattgag aagtttgcga
     3121 aagatagcaa gtcattaaac tcttagaaac attgatattt cggcgtttct aagagttttt
     3181 aattttcaac ataaagaaaa aagattgaag aa
//
LOCUS       DBNFCX010000157         3169 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.158, whole genome shotgun sequence.
ACCESSION   DBNFCX010000157 DBNFCX010000000
VERSION     DBNFCX010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3169)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3169)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3169
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.158"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            226..1125
                     /locus_tag="AC1PJC_002174"
     CDS             226..1125
                     /locus_tag="AC1PJC_002174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004347124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIP6621138.1"
                     /translation="MANTLLNVTAVSKTYGKQKVLDNISFDINCGEICGLVGENGAGK
                     TTLIRILAGLISSNSGEISGLESQAVSCIVESPALYPHLSAGDNLRVQMIGLGIGADK
                     DKVKNLLRMVGLEGVDSKKKVKDFSLGMKQRLAIALAICDWPQLLILDEPINGLDPVG
                     IKEIREILLLLKNEYRMTILVSSHILSELDLVVDKYIIMSKGKVLQIIQKDALKKLLQ
                     TKRIVRVDKEHEALEVLLSEGIEAVVTDEGIELSESGKSTSWIIDCLRKNEIQIEEII
                     KFQPSFESYYLSLITREEVPHVP"
     gene            1115..1822
                     /locus_tag="AC1PJC_002175"
     CDS             1115..1822
                     /locus_tag="AC1PJC_002175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621139.1"
                     /translation="MFHKAKSDFYRVWKERSLIFPVSLVILLGVLFAYLMRETDGQGG
                     ITIILSSVAGFIPLFFSSACNLVWGEEFTNRTINHAIIKSSSRFSVYFYKLFETLSLC
                     FAYTLLLFFTVIVCRIFLNGQVDVGEAFDLLIKQLPFHLCFSLLCLFIFQYVDKIYQA
                     YLIYTMIVLMFDNLVSYVTTSLLVNDVFSHFFLFNQVKLITNQTEFFTPSSLIALIFS
                     VVYLLSSYLLFSSREFK"
     gene            1842..2408
                     /locus_tag="AC1PJC_002176"
     CDS             1842..2408
                     /locus_tag="AC1PJC_002176"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621140.1"
                     /translation="MKKIIPFFILIITFLGVAIYLSLESDKTDVEIAKSWTVTGKEIN
                     TIEIYGSEQPFELEIVETDQEVTTISLTGKISEAAMSTLEKADISENDAYIPLGKKGF
                     KLVTVASGKSSLKAKIELAKGATFKEIYVDTWNGTVDITLPRSYDGGYDVKLNSGAKL
                     LEVPEEGANKESILKIDAYADVSIRKGD"
     gene            2410..>3169
                     /locus_tag="AC1PJC_002177"
     CDS             2410..>3169
                     /locus_tag="AC1PJC_002177"
                     /inference="COORDINATES: protein motif:HMM:NF015377.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine peptidase family C39 domain-containing
                     protein"
                     /protein_id="HIP6621141.1"
                     /translation="MITHHKQVSMLDCGLACIKTVLSYYDIFPENIDTIFDVKNDQGM
                     SLLDIEETLSQFHIKSDSFQVEQVEKLKQLEFPAIAVVNRGGLSHYIVLLGYNEGSFT
                     ISDPEQVSFSHISFNDLLSQFSGIVLIPTGNKKILPKFESIIKNGDKVDLYRKFIGTI
                     PRAQKITLWCYGILKLVLPIMMSLVLQFIVGNIFSMPINNQIFIVVIVLCSLLIFKLI
                     SSLEIKLKTEIENQLMREVLYDYYVDKIEKFDTTK"
BASE COUNT         1020 a          446 c          635 g         1068 t
ORIGIN      
        1 atgataaact ataaataaaa agggttacaa aaacccgcat gagaaaattg aatatggaag
       61 aaaaaacaaa aataacagct ggtcaaattt gtctatacta ttggtatgga atcggtttcc
      121 tttgctggga ttagttcaca tggttccgtt caccaaataa tttaataact tgactggtcg
      181 atagtttgtc acttttctat cgacttttct ttttaggggg ttgctatggc aaatacatta
      241 ttaaatgtta cagcagtatc caaaacttac ggaaagcaaa aagttctaga taatattagt
      301 tttgatatta actgtggaga aatttgtggt ctagtaggag aaaacggtgc aggcaagact
      361 accttaatcc gaattcttgc aggcttaatt tcgagtaatt ctggagaaat aagtggttta
      421 gagagtcaag ctgtttcttg tattgtagag tcacctgctc tgtatcctca tttatctgca
      481 ggtgacaatc ttcgtgttca aatgataggt ttaggaatcg gagcggataa agacaaagtc
      541 aaaaatctat tacgtatggt tggacttgag ggtgtagatt ctaagaaaaa agtgaaagat
      601 ttttctcttg gaatgaagca acgtttggca atagccttgg ctatttgtga ttggccccaa
      661 ctacttatat tagatgagcc aataaacggt ctggaccctg tgggtattaa ggaaattcgt
      721 gagattcttc tgcttttgaa aaatgagtat cgtatgacta ttctagtttc aagtcatatc
      781 ttgtctgaac tagacttggt cgttgataag tatattatca tgagcaaagg aaaagtgtta
      841 caaataatac aaaaagatgc tctgaaaaaa ctacttcaaa ccaaacggat tgtcagagtg
      901 gataaggagc atgaagcgct tgaagtgtta ctttccgagg gaattgaggc ggtagtgacc
      961 gacgaaggaa ttgagctttc agaaagtgga aaatcaacca gctggattat tgattgctta
     1021 cggaaaaatg agattcaaat cgaggaaatc attaaatttc aaccgagttt tgaatcctat
     1081 tatctatctt tgattacaag agaggaggtt cctcatgttc cataaagcga aatcagactt
     1141 ttatagggta tggaaagaaa ggagtttaat ttttccagtc tctctggtga ttcttttagg
     1201 agtactcttc gcttatctga tgagagaaac tgatggacaa ggaggtatta cgattatttt
     1261 atcttcagtg gcagggttta ttcctctatt cttctcaagc gcttgtaatc tagtctgggg
     1321 agaagaattt accaatcgca ccattaacca tgcaatcata aaaagctcct ctcgtttttc
     1381 agtttacttt tataaattat ttgaaacctt gtccctgtgt tttgcatata cgcttttact
     1441 attttttaca gtaattgtat gtagaatttt tttgaatgga caagtagatg taggtgaagc
     1501 atttgacctg ctcattaaac agttgccatt tcatctttgt ttttctctat tatgtctgtt
     1561 tatttttcag tatgtagata agatttatca agcctacctt atttatacca tgattgtctt
     1621 gatgtttgat aatttagttt cgtatgtaac aacaagtctc ttggtaaatg atgtcttttc
     1681 tcatttcttt ctttttaatc aggtaaagtt aatcactaat caaacagaat tttttactcc
     1741 gtctagtctg attgcattga tatttagcgt tgtctattta ttgagttcgt acttactttt
     1801 ttctagtagg gagtttaaat agtttaagga gggcacttgt aatgaaaaaa ataattccat
     1861 ttttcatttt aatcattact tttttaggag ttgcgattta cctaagttta gagagtgaca
     1921 aaacagatgt agagattgct aagtcttgga cagtaacagg caaagagatt aatacaattg
     1981 aaatctatgg tagtgagcaa ccttttgaac ttgaaattgt ggaaacagac caagaagtga
     2041 cgacgattag tttgacaggg aaaatttctg aagcagcaat gtcaacactt gagaaggcag
     2101 atattagtga aaacgatgct tatataccat tggggaaaaa gggttttaag ttagttaccg
     2161 tagcaagtgg aaagagtagt ttaaaagcaa aaattgaatt ggcaaagggt gctactttta
     2221 aagaaattta tgttgataca tggaacggta ctgtagatat tactctgcct cgaagttacg
     2281 atggaggtta tgatgtcaag ttgaatagtg gggcaaagtt actagaagtt cctgaagaag
     2341 gagctaataa ggaaagtatc ctcaaaatag atgcctatgc cgatgttagc atcagaaagg
     2401 gtgattaaga tgattactca tcataaacag gtttctatgt tggattgtgg cttggcctgt
     2461 atcaagacgg tcttgtctta ttatgatata tttccagaga atattgacac aatttttgat
     2521 gtaaaaaatg atcaaggtat gtccttgtta gatattgaag agactttgag tcaattccat
     2581 ataaaatctg attcatttca agtggagcag gtggaaaaat taaaacagct agaattccca
     2641 gctattgcag ttgtaaatag aggcgggtta tcgcactata ttgttttact gggctataat
     2701 gaaggttctt ttaccatatc tgaccccgag caagtatctt ttagtcatat aagttttaat
     2761 gacttattat cgcaattttc aggaattgtt ctaataccaa ctggaaataa aaagatattg
     2821 ccaaagtttg aaagtatcat caaaaatgga gataaggtag atttatatcg taagtttatt
     2881 ggaactatac ctagagcaca gaaaatcact ttgtggtgct atggtattct aaagcttgtc
     2941 ttaccaatta tgatgtcatt ggtgcttcaa tttatagtcg gtaatatttt ttcgatgcct
     3001 attaataatc aaattttcat tgttgtaatt gttttatgca gtttattaat tttcaaattg
     3061 atttccagct tagagataaa attaaaaact gaaattgaaa accagctcat gagagaggtc
     3121 ttatatgact actatgtcga taaaatagag aaatttgaca cgactaaaa
//
LOCUS       DBNFCX010000158         3121 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.159, whole genome shotgun sequence.
ACCESSION   DBNFCX010000158 DBNFCX010000000
VERSION     DBNFCX010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3121)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3121)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3121
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.159"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..360
                     /locus_tag="AC1PJC_002178"
     CDS             <1..360
                     /locus_tag="AC1PJC_002178"
                     /inference="COORDINATES: protein motif:HMM:NF042474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-three component system middle component 2"
                     /protein_id="HIP6621142.1"
                     /translation="LSLDRLWLINFISLYAKDFKFSDINLYGDSIYSSVQLTVRHEKV
                     KKAILLLVSKHLIKLDEGKIAKISITQKGQDLVEKLNSDFASSYKVVTNSIYNTLKNM
                     SDLELLAFTHEHILNKE"
     gene            366..2165
                     /locus_tag="AC1PJC_002179"
     CDS             366..2165
                     /locus_tag="AC1PJC_002179"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HIP6621143.1"
                     /translation="MEAPYLKKLTVTGLHKKSEINFTKGLNIITGPSNVGKTCIVKCI
                     DYLTGSSSLPFSTSTNYNTITLEISVEDKLVILSRSLEEDTIIVESTLPSILSGEYYS
                     KNKRKNREPISNVWLQIIGIVPPVKVVKNKNFKTQKLGVRTFINSWIIHENDMNRPTS
                     ILLPQMPNQQTAYLSALLYLLYGKDFSDIKKQESAEERKIRHNSVKNYISSKIVQFNE
                     RHDRLTQKLDQKSVLDIETEIEQLSEKLQKLRNTLTSTNSKHENLLQQIVKIDSELSE
                     KSVLLNRFNELSSQYQSDFNRLSFIVESHNELANVADSALCPVCNNHINQESLEHHLD
                     SFSEELATLISKIETLNQTNTDLQKNISVLLESKTNLEQQKQMISAEIDNILLPDEKK
                     LSNKIQQYKSYIKTKSDIETINRLVENWSKDIDDLENEKTEKKEYLPKDEYPAQFWQY
                     MTKNIQSILSECAFDKASFSRFDRKEFDIMLMNEKKTSRYGKGFIAYLNTVVVLALRK
                     IFSQQAQYKPFFHIFDTPLLGLDEGEKNDTPESMQIALFEYFKSSAYEGQLIVIENSR
                     NLPKLNYNNINYIEFTKSHSYGRYGFLNGVNDD"
     gene            complement(2374..2625)
                     /locus_tag="AC1PJC_002180"
                     /pseudo
     CDS             complement(2374..2625)
                     /locus_tag="AC1PJC_002180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637301.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(2627..2764)
                     /locus_tag="AC1PJC_002181"
     CDS             complement(2627..2764)
                     /locus_tag="AC1PJC_002181"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621144.1"
                     /translation="MKCFVGLDVSSTKLDVCIMLSDTTTPFTASLPNDLVGASEIKKQ
                     H"
BASE COUNT         1135 a          526 c          515 g          945 t
ORIGIN      
        1 ctatctcttg atagactttg gttaattaat tttataagct tatatgctaa ggatttcaaa
       61 tttagtgata tcaacctgta tggagatagc atttattctt cagtacaatt gactgtcaga
      121 catgaaaaag taaaaaaagc gatactacta ttggtatcga aacatcttat aaaattagat
      181 gaagggaaaa tagctaaaat ttctataact caaaaaggtc aagatttagt tgaaaaactg
      241 aattctgatt ttgctagttc ctataaggta gttaccaata gtatctacaa tactttaaaa
      301 aatatgagtg atttagaatt gctcgcattc actcatgaac atattctaaa taaggaatga
      361 ttattatgga agcaccttac ttgaaaaagt taactgtaac tggattacat aaaaaatctg
      421 aaataaattt tactaaagga cttaacatta tcacaggacc ttccaatgtc ggaaaaacct
      481 gcattgttaa gtgtattgac tatcttacgg gtagctcttc tctcccgttc tctacttcaa
      541 caaattacaa taccattact ttggaaattt cagttgaaga taagctagtt attttaagtc
      601 gaagcctcga agaagataca attattgttg aatctactct tccaagtatt ctctcagggg
      661 aatactactc aaaaaacaag aggaaaaata gagagccaat aagtaatgtc tggcttcaaa
      721 ttattggaat tgttcctcca gttaaagtgg ttaaaaataa aaactttaag actcaaaaac
      781 ttggagttag aacctttatt aattcttgga ttattcatga aaatgatatg aatcgtccta
      841 cctcaatttt gctacctcag atgccaaacc aacaaacagc ttacctatca gcacttcttt
      901 acttgcttta tggaaaagat ttttctgata tcaagaaaca agaatccgct gaagaaagaa
      961 aaatacgaca taactctgtc aaaaactata ttagctcaaa gatagtccag tttaatgagc
     1021 gtcacgatcg actaacacaa aaattagacc aaaagtcagt cttagatatt gaaactgaaa
     1081 ttgagcaact atcagaaaaa ctacaaaagt tgcgtaatac tctcactagt actaattcaa
     1141 aacacgaaaa tctactacag caaattgtaa aaatcgattc tgaactatct gagaaatccg
     1201 tattactcaa tcgtttcaat gaactttcaa gtcaatatca atctgacttc aatagattat
     1261 catttattgt agagtcacac aatgaattag caaatgtagc agactccgct ttgtgtcctg
     1321 tctgcaataa ccatatcaat caagaatcat tggaacacca tcttgattct tttagtgagg
     1381 aactggctac tttgattagt aaaattgaaa ctctaaacca gacgaatact gatttacaaa
     1441 agaatatttc tgtactttta gaatcaaaaa ctaatcttga gcagcaaaag caaatgattt
     1501 cagctgaaat tgataacatc ttgctacctg acgagaaaaa actttccaat aaaatccagc
     1561 aatataaatc atacatcaaa acaaaaagtg atattgaaac aataaataga ttggtagaaa
     1621 attggtccaa agatattgat gatttagaaa atgagaaaac tgaaaaaaaa gagtatcttc
     1681 ctaaagatga gtacccagct cagttctggc agtacatgac taaaaatata caatcaatcc
     1741 tatctgagtg tgctttcgac aaagccagct ttagtcgatt tgataggaaa gaatttgata
     1801 ttatgctaat gaatgagaag aaaacttccc gatatggtaa aggttttatt gcatatctaa
     1861 atactgttgt agtcctagct ttaagaaaaa tattctctca acaggctcaa tataaaccat
     1921 tcttccacat ttttgatact cctctactag gtttagatga aggggaaaaa aatgatactc
     1981 cagaaagtat gcaaatcgct ttatttgaat actttaagtc ttcagcttac gaaggacaac
     2041 taatcgtcat tgaaaactct agaaatctac caaagcttaa ttataacaac attaattata
     2101 ttgagtttac aaaaagtcat agctatgggc gctatggttt tctcaatggg gtaaatgatg
     2161 attgaaaaac tactaagttg taaataacaa atagctattt ttcaaatgcc gaatttaatt
     2221 aaatataaca caaaagtatt aaaagtctag tggtaaaaag tcaatagaaa gttgattaat
     2281 ttttagttga ttttttagaa aacagggtgc accaaaaaca cctagcgaaa aacgcttttt
     2341 ttcactagct taatcaagga cttatgccga taatcactta tcttccataa gcctccttgg
     2401 tggcgtatag agttggcgat tgcgtagtag cgcatccacc agacgcacaa attttctagc
     2461 ggttaagacg atggctcgtt tgtgttgatg tttaggaact tcttgatact tcttcatgta
     2521 aaaggtttga tactcactat tatgtcgcct caccgagttg gcggcttcaa ctaagtaata
     2581 gcgaagatag cgattgcctc gttttacaag ttctgtattt tgagagttag tgttgtttct
     2641 tgatttcaga agcacctact aggtcattag gaagagaagc tgtaaaggga gttgttgtat
     2701 cactcagcat gatacagaca tctaatttgg tagagctaac gtctaaaccg acaaaacatt
     2761 tcatttggaa ggtctccttt catttgtatt tggaaagttt cttgactatt gtaagggttc
     2821 cccagaaaca cgttggacca acagactcgc ataagagaat tctaatcact agctcacctg
     2881 ccgcctgtac gctactacgt acagaagtga gcgcaatgga aacagctagt gtgttggaag
     2941 taggaacaac gcttgggtaa cagacttaaa aatgaagtct aagcaacaag gagaaaaaga
     3001 aacaaccatg agtccattcc atgactctat tgttctggaa aaccttgcaa tagtcaagtt
     3061 aacgttatta caattattaa aaatttgggg ttgaaaaatc cccataaact tattttacga
     3121 g
//
LOCUS       DBNFCX010000159         3102 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.160, whole genome shotgun sequence.
ACCESSION   DBNFCX010000159 DBNFCX010000000
VERSION     DBNFCX010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3102)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3102)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3102
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.160"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..1755
                     /gene="ftsH"
                     /locus_tag="AC1PJC_002182"
     CDS             <1..1755
                     /gene="ftsH"
                     /locus_tag="AC1PJC_002182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HIP6621145.1"
                     /translation="YKTEQEAKDELASSIKLFQVSSKVKYKNFKSLILPSETNLSELQ
                     ALANENGVKVTIKPESSNGLWLNIVFNLLPLIIAGVFFMMMMNQGGGARGAMNFGRNK
                     AKALEQSNIKVRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLEGPPGT
                     GKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEID
                     AVGRQRGVGMGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGR
                     FDRKVLVGRPDVKGREAILKVHAKNKPLAADVDLKLVAQQTPGFVGADLENVLNEAAL
                     VAARRNKTVIDASDIDEAEDRVIAGPSKKDRQVSAKEREIVAYHEAGHTIVGLVLSNA
                     REVHKVTIVPRGRAGGYMIALPKEDQMLLSKEDMKEQLAGLMGGRVAEEIIFNTQTTG
                     ASNDFEQATQMARAMVAEYGMSDKMGPMQYEGSHAMFGGQTTHKHISEQTAYELDNEV
                     RDLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSVQIKSLYETGKMPENIERDDE
                     DVHPLSYEEVKEKINTKE"
     gene            2093..2563
                     /locus_tag="AC1PJC_002183"
     CDS             2093..2563
                     /locus_tag="AC1PJC_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HIP6621146.1"
                     /translation="MEFEKVYASVKGIVNKARKEFYIKLWDRDDWEQEGMMTLFELLE
                     AQPWLVDEQVQLYCYFKVKFRNRIKDRIRKQESQKRKFDRMPHEDIHELSHAIQSPGL
                     INDELLMLRGALRDYRKNLSNDQLDKYEKLISGQCFNGRREMIRDLQIHLKDFR"
BASE COUNT         1091 a          520 c          662 g          829 t
ORIGIN      
        1 tacaaaacag aacaggaagc taaagatgag ttagcttcat ctattaagtt attccaagtt
       61 tctagtaaag ttaagtataa aaactttaag tcactaattt taccgtcaga aacgaatttg
      121 tcagagctac aagctcttgc aaatgaaaat ggagtaaagg ttactattaa acctgaaagt
      181 tcaaatggac tttggttaaa tatcgtcttt aatttgttac cgcttatcat tgctggtgta
      241 ttcttcatga tgatgatgaa ccagggtggt ggagcacgtg gtgcaatgaa ctttggacgg
      301 aataaagcta aagctttgga acaaagtaac atcaaggtac gtttctcaga tgtagcaggt
      361 gcagaggaag aaaaacaaga attagttgaa gttgttgaat ttttgaagga tccaaaacgc
      421 tttactaaac ttggagcacg tattccagca ggtgtgctac tagagggtcc tccaggaacc
      481 ggtaaaacct tgcttgccaa agcagtagcg ggtgaagcgg gtgtaccatt cttctccatt
      541 tctggttcag attttgttga aatgtttgtt ggtgtcggtg ccagccgtgt tcgttcatta
      601 tttgaagatg caaaaaaagc agcaccagcc attattttca tcgatgaaat cgatgctgtc
      661 ggtcgccaac gtggtgtcgg catgggtggc ggtaacgacg aacgtgaaca aaccctcaac
      721 caactcttaa ttgaaatgga tggttttgaa gggaacgaag ggattattgt cattgccgca
      781 accaaccgta gtgatgtttt agaccctgcc cttcttcgtc caggtcgttt tgaccgtaag
      841 gtattggttg gtcgtccgga tgttaaagga cgtgaagcaa tccttaaagt tcatgcgaag
      901 aataaaccac tagcagcaga tgtagatttg aaattagtag cacaacaaac accaggattt
      961 gttggtgcag atttagagaa cgttctgaac gaagcagccc ttgtagctgc acgtcgaaac
     1021 aagactgtca ttgatgcttc agatattgac gaagcagaag atcgtgttat tgcaggtcca
     1081 tctaagaaag accgtcaagt ttcagccaaa gaacgcgaaa tcgttgccta ccatgaagct
     1141 ggtcatacga ttgtcggcct tgtcttgtca aatgcacgtg aagttcacaa agtaacaatt
     1201 gttccccgcg gtcgcgcagg tggatacatg attgcccttc ctaaagaaga tcaaatgctt
     1261 ctttctaaag aagatatgaa ggagcaattg gctgggctta tgggtggtcg tgtagcagaa
     1321 gaaattatct ttaatactca aaccacaggt gcctcaaatg actttgaaca agctacacag
     1381 atggcgcgtg ctatggttgc agaatatggt atgagtgaca aaatgggacc aatgcagtat
     1441 gaaggtagtc atgctatgtt tggtggccag acaactcata aacacatttc agagcaaact
     1501 gcatatgagt tagataatga agtacgtgat ttgttaaatg aagctcgtaa caaagcggct
     1561 gaaattattc agtctaatcg cgaaactcat aaactaatcg cagaagcatt gctcaaatac
     1621 gaaaccctag acagtgttca gatcaaatct ctctatgaaa caggcaaaat gccagagaat
     1681 attgaacgtg atgatgaaga tgttcatccc ctttcttatg aagaggtaaa agagaaaatt
     1741 aatacgaaag agtagtataa aaatactctt ggcaagacat tccctcactc tcaaccacta
     1801 aaataaccac aaagccttcg ctaagtacat aatcttggcg agggcttttt tacatgatac
     1861 acatcagaaa cagggcattt acaagaaaaa cgaatcaata gttatttatc tcaatcttag
     1921 aactatacca aataactccc ttctgaagca gaatgcaata tttgccatag agtatcaata
     1981 gcaaatatac ttaaaaaaag aaaaatcaaa taaagtatgc tagacaaaaa tgtcctgtag
     2041 aaagatagca cttttcgata aacttaaacc atcaacaaaa ggagattaag aaatggaatt
     2101 cgaaaaagtg tacgcaagcg tcaaaggtat tgtaaacaag gctcgaaaag agttttacat
     2161 taaactatgg gatcgagatg attgggaaca agaaggaatg atgaccttgt ttgaattatt
     2221 ggaagctcaa ccgtggctag ttgatgaaca agttcaatta tattgttatt ttaaagtcaa
     2281 gttcagaaat cgaatcaagg atcgtatccg caaacaggaa agtcaaaaac gcaagtttga
     2341 ccgtatgcca catgaagata ttcacgaatt atctcacgca atacaatcac cgggattgat
     2401 aaacgatgaa ctattaatgt tgagaggtgc cttgagagat tatcgaaaaa atctgagcaa
     2461 tgatcaactt gataaatacg aaaaattaat tagcggacaa tgttttaatg gtcgccgtga
     2521 aatgatacgt gatttacaaa ttcatttgaa agactttcgc taaagctagt cactaacatt
     2581 atgttaatcg aattaagaaa ttgggcagaa gcaccataaa aagttctgtt cagtttcttt
     2641 ttatataggt tatagcaaag agaagaagga ataggagaaa aaacaaattt caagttgaaa
     2701 ttagccatcc tatcttatgg agagtaggga tgtgactaaa tgtgatactc agccaatagt
     2761 aacctaagta attgaaagac tgattcagcg gtattattta gaattaacct tatgctttag
     2821 tatctacata gaactttcag tgtaaaaaaa atatcaaaaa accggttgac aatgtatata
     2881 agtcgtgata gaataattga gttgtctcat gaagggctag ttaacagagg aacgaaaaaa
     2941 agtttcaaaa aagtgttgac aagaccatca gaagatgata gaataattga gctgtctctt
     3001 gagggactgg tcaacagaag aacgaaaaaa agtttcgaaa aagtgttgac aaagttcaca
     3061 agaaatgata aactaagata gttgtcgcga gagcgcgata aa
//
LOCUS       DBNFCX010000160         3031 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.161, whole genome shotgun sequence.
ACCESSION   DBNFCX010000160 DBNFCX010000000
VERSION     DBNFCX010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 3031)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3031)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3031
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.161"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(91..1119)
                     /locus_tag="AC1PJC_002184"
     CDS             complement(91..1119)
                     /locus_tag="AC1PJC_002184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016503195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004793 - threonine aldolase activity
                     [Evidence IEA];
                     GO_process: GO:0006567 - threonine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine aldolase family protein"
                     /protein_id="HIP6621147.1"
                     /translation="MLHFENDYNKGAHPALLEALVASNQEGLSGYGTDKYTESAIEKI
                     RLATDCPHAQVTFLAGGTQTNQIVISSMLASYEGVIAADTGHIAVHEAGAIEFTGHKV
                     LALPHTDGKLVASEVENYISDFYADANHAHMVHPGMVYISHPTEYGTLYSKTELEDLS
                     KVCQQHNIPLFLDGARLGYGLAARDTDLDLKTIAELTDVFYIGGTKLGALMGEALVFT
                     KNNQPKNFVSIVKHHGALLAKGRVTGVQFDCLFTDDLYLELGRHAIAMAEQLTQILEE
                     KGFQFYLKSPTNQQFVIVKNDELTRLTEVGIAYGFWEKYDDSHSIIRFATSWSTSQAD
                     IDALRNRL"
     gene            complement(1181..1252)
                     /locus_tag="AC1PJC_002185"
     tRNA            complement(1181..1252)
                     /locus_tag="AC1PJC_002185"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1217..1219),aa:Arg,seq:ccg)
     gene            complement(1290..2495)
                     /gene="rpsA"
                     /locus_tag="AC1PJC_002186"
     CDS             complement(1290..2495)
                     /gene="rpsA"
                     /locus_tag="AC1PJC_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002897515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HIP6621148.1"
                     /translation="MNEFEDLLNSVSEVTPGDVVTAEVLTVDAGQANVAISGTGVEGV
                     LTLRELTNDRDADINDLVKVGETLELLVLRQVVGKDTDTVTYLVSKKRLEARKAWDKL
                     VGREEEVVTVKVTRAVKGGLAVEFEGLRGFIPASMIDSRFTRNTERFVGQEFDAKIKE
                     VDPAENRFILSRRDVVEAEAAAARAEVFGKLAVGEVVTGKVARITSFGAFIDLGGVDG
                     LVHLTELSHERNVSPKSAVTVGEEVEVKVLAIDEVEGRVSLSLKATQPGPWDGVEQKL
                     AAGDVIEGKVKRLTDFGAFVEVLPGIDGLVHISQISHKRVENPKDALSVGQEVTVKVL
                     EVNAADERVSLSIKALEERPAAVEGEEKAEKRAPRPRRQKREEKRDYELPETQSGFSM
                     ADLFGDIEL"
     gene            complement(2619..2690)
                     /locus_tag="AC1PJC_002187"
     tRNA            complement(2619..2690)
                     /locus_tag="AC1PJC_002187"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2656..2658),aa:Gln,seq:ttg)
BASE COUNT          900 a          712 c          540 g          879 t
ORIGIN      
        1 ataggctacc gccttattga acgttatgca gtttatcgct atcattattt acaaactaaa
       61 aagaaaggct gaccctttct tttttattaa ttataatcta ttccttaacg catcaatgtc
      121 cgcttgacta gttgaccagc tggtcgcaaa gcggatgata ctgtggctat cgtcgtattt
      181 ctcccagaag ccataggcaa ttccaacttc tgtcaatcta gtcaattcat cattcttaac
      241 aataacaaat tgctgattgg tcggtgattt gagatagaat tgaaagcctt tctcttccag
      301 aatctgggtc agttgctctg ccattgcgat agcatgacgc cccaattcaa gatacaagtc
      361 atcagtaaat aagcaatcaa actggactcc tgtcactctt cctttcgcca acaaggcacc
      421 atggtgtttg acgatcgata cgaaattctt aggctggttg ttctttgtaa ataccaaagc
      481 ttcccccatc aaggcaccga gttttgtccc accaatgtag aaaacatctg tcagctctgc
      541 aattgtcttc aaatcaagat ccgtatcgcg tgcagcaaga ccataaccca agcgagcacc
      601 gtctaaaaag agtggaatat tatgctgttg gcaaactttg gacaaatctt ctagctctgt
      661 tttgctataa agtgtaccat actctgttgg atgggaaata taaaccatcc ctggatgaac
      721 catgtgagca tgattagcat ctgcgtagaa atcggaaata tagttctcaa cttcacttgc
      781 gacaagtttg ccatccgtat gcggtaaggc caacacctta tggcctgtaa attcaattgc
      841 ccctgcttca tgaactgcaa tatgaccagt atccgctgca atgactcctt cataggaagc
      901 taacatagac gaaatgacaa tttgattggt ctgcgtgcca cctgctaaaa acgtaacttg
      961 tgcatgagga cagtccgtag caagtctgat tttttcgata gcagattcag tatatttatc
     1021 agtgccatat ccagataaac cttcttggtt gcttgcaact aaggcttcta gcaaggcggg
     1081 atgggcacct ttgttatagt cattttcaaa atgtaacata tcataacctc cttgatataa
     1141 tataacaaaa aagcctgtta atgcaggctt ttcaatttag tccaccctga gggaatcgaa
     1201 cccccatctc aagaaccgga atcttacgtg atatccatta cactaagggt ggaaaggaaa
     1261 aacttgcaca aggcaagttt ttatatgaat tacaattcaa tgtcaccgaa aaggtcagcc
     1321 attgagaatc cagattgagt ttctggcaat tcgtaatcac gtttttcttc acgtttttga
     1381 cgacgtggac gtggagcacg tttttcagct ttttcttcac cttcaactgc tgctggacgc
     1441 tcttccaaag ctttgataga aagtgataca cgctcatcag ctgcgtttac ttcaagaact
     1501 ttaacagtta cttcttgacc tactgacaaa gcatcttttg gattttcaac acgtttgtgt
     1561 gaaatttgtg agatatgtac caaaccatcg atacctggca atacttcaac gaaagcaccg
     1621 aagtcagtca agcgttttac tttaccttcg attacatcgc cagctgccaa tttttgctca
     1681 acgccatccc atggaccagg ctgtgtagct ttcaatgaca atgatacgcg accttcaact
     1741 tcgtcgattg caagaacttt aacttcaact tcttcaccaa ctgttacagc tgatttagga
     1801 gatacgttac gctcgtgtga caattcagtc aagtgcacca aaccatctac accaccaagg
     1861 tcgatgaaag caccaaagct tgtgatacgt gcaactttac cagtcacaac ttcaccaact
     1921 gccaatttac cgaatacttc agcacgtgca gctgcagctt ctgcttcaac aacgtcacga
     1981 cgtgacaaga tgaaacggtt ctcagcagga tcaacttctt tgattttagc atcaaattct
     2041 tgacctacaa aacgctcagt gttacgagtg aaacggctgt cgatcattga agctgggatg
     2101 aaaccacgaa gaccttcaaa ttcaactgca agaccacctt taactgcacg agttacttta
     2161 actgtaacaa cttcttcttc acgaccaaca agcttgtccc atgctttacg tgcttccaaa
     2221 cgttttttag atacaagata agtaacagtg tctgtatctt taccaacaac ttggcgaagt
     2281 actaacaatt caagtgtttc accaactttt acaaggtcgt tgatatcagc atcacggtcg
     2341 ttagtcaact cacgaagagt caatacgcct tcaacaccag tacctgagat agctacgttt
     2401 gcttgaccag catcaactgt caatacttct gcagttacca catcaccagg tgtaacttcg
     2461 cttacactgt tcaacaaatc ttcaaattcg ttcattataa aaaaacctcc gacaatcagg
     2521 tctttcgacc caacataaaa tatattttat ttaaggcaca cgcaaggaca acaacaatta
     2581 gacatctttg acgaactaga ctatatctag tacctttact ggggtagctg gattcgaacc
     2641 aacgcatgag ggagtcaaag tcccttgcct taccgcttgg cgatacccca aaaaatagat
     2701 acaattcatt tatttactaa tcacaagaaa ttgaactcga tattaatttc ttaggaaaat
     2761 agatagcctt ccttgagtgt taacattcag cgtcagtctc ctaattttct acagaaattt
     2821 ctgataaacc agaacatctc tcgtatctta gttgaacacg gactaaaatc ctagtgaaaa
     2881 agataaactt ccttgtgtgt ttagcacact acgtcagttt cctattttca tacggatttc
     2941 ttaacgtcct ttgtatcctg ttcaatggag agagagggat tcgaaccccc gaacccgaag
     3001 gagcggattt acagtccgcc gcgtttagcc t
//
LOCUS       DBNFCX010000161         2952 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.162, whole genome shotgun sequence.
ACCESSION   DBNFCX010000161 DBNFCX010000000
VERSION     DBNFCX010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2952)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2952)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2952
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.162"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(81..551)
                     /locus_tag="AC1PJC_002188"
     CDS             complement(81..551)
                     /locus_tag="AC1PJC_002188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HIP6621149.1"
                     /translation="MTPTQLWQEFLAINSQAGPEPESWAFGAEADRLADLVARGIKTS
                     TSSAHALYAVEGEEIPTAGGYDIILDGQGKAVCIIQTTKVYVTPFSQVTEEHAYKEGE
                     FRQGGDLSDIKAKSLIHWRQVHEELFTIWLAEAGLSFSEDMLVVCEEFELVYPK"
     gene            complement(548..1099)
                     /locus_tag="AC1PJC_002189"
     CDS             complement(548..1099)
                     /locus_tag="AC1PJC_002189"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HIP6621150.1"
                     /translation="MILETNRLLLRPWSETDAADLFSQASHHEVGPAAGWPVHQSVEE
                     SREIIKTVLSQPETYALVLKETGQVIGSIGLMLGKQGGLDLPDSEAELGYWLGQGFWG
                     QGLVPEACQAILNYGFNQLNLEKVWCRAFVENSKSLRVQEKLGFVYQYLLEDVHFPLI
                     DEVRSERVNLLTREEWQSRKEKL"
     gene            complement(1112..1810)
                     /locus_tag="AC1PJC_002190"
     CDS             complement(1112..1810)
                     /locus_tag="AC1PJC_002190"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002990841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase"
                     /protein_id="HIP6621151.1"
                     /translation="MTKTALITGVSSGIGLAQAGIFLENGWRVYGIDQASKPDLAGDF
                     HFLQLDLTGDLSPVYSWCQTVDVLCNTAGILDDYRPHLDIEEDELAQVFAVNFFAVTR
                     LTRPYLQQMVDRQSGIIINMCSIASILAGGGGSAYTASKHALAGFTKQLALDYAKDKV
                     QVFGIAPGAVQTGMTQKDFEPGGLADWVADQTPIGRWTQPSEIAELTFMLASGKLASM
                     QGQIITIDGGWSLK"
     gene            complement(1803..2039)
                     /locus_tag="AC1PJC_002191"
     CDS             complement(1803..2039)
                     /locus_tag="AC1PJC_002191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018367459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2829 domain-containing protein"
                     /protein_id="HIP6621152.1"
                     /translation="MTFEEILPGLKAKKKYVRTGWGGAENYVQLFDTIEVHGQRLEAT
                     PYFLINVTGEGEGFSMWSPTPCDVLATDWVEVHD"
     gene            2263..2571
                     /gene="tnpA"
                     /locus_tag="AC1PJC_002192"
                     /pseudo
     CDS             2263..2571
                     /gene="tnpA"
                     /locus_tag="AC1PJC_002192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005576373.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
BASE COUNT          790 a          701 c          681 g          780 t
ORIGIN      
        1 aaactggaat gaagccagtt tctcaaaaat ttctagtatt agaaaacaaa ctacaggttg
       61 attgcatcca atagaattgt ctatttagga taaaccaatt caaattcttc acagacaacc
      121 agcatatctt ctgagaagga caggcctgct tctgccagcc agattgtgaa gagttcttca
      181 tggacctgcc gccagtggat cagacttttc gcttttatgt cagacaagtc acctccctga
      241 cgaaactcgc cctccttata ggcatgttct tccgtcactt gggaaaaggg cgtcacatag
      301 accttggtgg tctggataat gcacacagcc ttaccttgtc cgtccagaat gatgtcatag
      361 ccaccagctg ttggaatttc ttctccctct actgcgtaga gtgcatgggc agagctggtc
      421 gaggttttga tgcctctagc caccaaatca gccagtcgat cagcttccgc accaaaggcc
      481 caggactccg gctcaggacc agcttgggaa ttgatagcaa gaaattcttg ccagagttgt
      541 gtaggggtca tagtttttcc ttcctagact gccattcctc tcttgttagc agattcactc
      601 gttcgctacg gacctcatca atgagtggga aatgcacatc ttccaagagg tattggtaaa
      661 caaagcccag tttttcttgg acacgtaatg atttgctatt ttctacaaaa gcacgacacc
      721 agactttctc taaattcaac tggttaaagc catagttcag tatagcttga caagcttctg
      781 gtaccagacc ctgtccccaa aatccctgtc caagccagta gcctagctca gcttctgagt
      841 caggcaaatc aagaccacct tgtttaccaa gcatgagccc gatactgcca atcacctgtc
      901 ctgtttcttt gagaacaagg gcgtaggttt ctggttggct aaggactgtc ttgataattt
      961 ctcgactttc ttccacgctc tgatgaacag gccaacccgc tgcaggacca acttcatgat
     1021 gactggcctg agaaaataag tcagctgcgt ctgtttcact ccaagggcgg agcaagagac
     1081 gattggtttc aagaatcata ccattccctc cctacttcaa actccagcca ccgtcgatgg
     1141 tgatgatctg gccttgcata gaggccagtt tgccactggc cagcatgaag gtcagctctg
     1201 ctatttcgct gggctgggtc cagcgtccga taggggtctg gtctgccacc cagtccgcta
     1261 ggccaccagg ttcaaagtcc ttctgggtca tgcctgtctg gacagcacct ggggcgatac
     1321 cgaagacctg gaccttgtcc ttggcatagt ccagtgccaa ctgcttggta aagcctgcca
     1381 aagcgtgctt ggaggcagta taggctgagc cccctccacc tgctagaatg gaggctatag
     1441 agcacatatt gataatgatg ccagactgtc tgtccaccat ttgttgcaga tagggacggg
     1501 tcagtctagt caccgcaaaa aaattaaccg cgaagacctg agctaattca tcctcctcga
     1561 tatccagatg gggacggtaa tcgtctagaa tgcctgctgt gttacagagg acgtcgactg
     1621 tctggcacca tgaatagact gggcttaaat cgcctgtcag gtccagctgt agaaagtgga
     1681 aatcgcctgc caaatcaggc ttgctggcct gatcaatccc gtacacacgc cagccatttt
     1741 ccaaaaaaat ccccgcctgt gccagtccga tgccgctgga aactcctgtg atgagggccg
     1801 tcttagtcat gaacttctac ccagtcggtg gcaaggacgt cgcagggggt cgggctccac
     1861 atggagaagc cttcgccctc gcctgtcacg ttgatgagga agtagggggt cgcctccagc
     1921 ctttgcccgt ggacctcgat ggtgtcaaag agctggacgt agttctccgc cccaccccag
     1981 cctgtgcgaa cgtacttttt cttggccttc aagcctggta aaatctcttc aaatgtcatg
     2041 gtttactcct ttgtttttct ttattatacc aaaaaatcag actgctcaac agggcagtct
     2101 gattttgttt atttgtgtga cttttagtcc gttaccctcc gtaaggtgcg tgccaaataa
     2161 accacccgct atgcgggtgc gcgacgaagg ttatacccaa aaaactccaa acgcgataca
     2221 ataaaggtgt tcaagcctat tgtaaagcga aaggagaaaa atatggcgca aaaggcacat
     2281 agtttatcac atacaaagtg gctgtgtaaa tactatcacc cctaagtata gacgaaaaat
     2341 tatctataat caatatcgaa gtagtcttgg agagatattt cgacgattgt gtagttataa
     2401 aggtgttgaa attatcgaag gtcatctgat gccagaccat gttcacatgt tagtcagtaa
     2461 tcctccaagg ttaagtgtat caagttttat gggctattta aaaggcaaga gtgctcttat
     2521 gatgtttgat aaacacgcca atctctctat aaatttagga atcgtcattt ctgagcagag
     2581 agcttcaaca atttggggaa ttgttgaaga gtgtaagttg gacttaatga agccacaatt
     2641 aagaaatata tacaagaata aagaaattat ccagtggatg atttcttcac aagcttcagt
     2701 ttaaaaagcg agttaaacat gatatagcac ttgataaatt gagtgtaaaa gagtatgaag
     2761 atccctttag ggataatggc aagtagtacg aatgcctctt taagaggcta gtgacgagtc
     2821 aaaagcagtg aggcttgaac aaagtgaaag ccagcgtctt taggcgctgg ctggtgatgt
     2881 gggcttatag cccttgttca aaccacccgt ttgacgggtg gtcatgattt gacacgctat
     2941 gagaagtata tc
//
LOCUS       DBNFCX010000162         2951 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.163, whole genome shotgun sequence.
ACCESSION   DBNFCX010000162 DBNFCX010000000
VERSION     DBNFCX010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2951)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2951)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2951
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.163"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..758
                     /locus_tag="AC1PJC_002193"
     CDS             <1..758
                     /locus_tag="AC1PJC_002193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HIP6621153.1"
                     /translation="GCFAILTVCLLFAPTLARANQIPDRPTGTTVVDETQLLSSETIA
                     EIDQLNRNWASTEQALQVGVYVTESLSSDIESLANETFRHWQVGFAGTDNGVLLVVAI
                     ADRAFRIETSDNAATVITDVEAKDILENAREFFRQEDYSRGISYIVNSIGDRFYGTSI
                     GKNQLAAIEEGTSEEGDGFWLFLVVILIAILFGIIDKSSRGGGGPGNLLWMLVDDHHH
                     YHNHHSSNSSSSSFGGGSWSGGGGGGGGASSGW"
     gene            831..1412
                     /locus_tag="AC1PJC_002194"
     CDS             831..1412
                     /locus_tag="AC1PJC_002194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HIP6621154.1"
                     /translation="MKKKWLVILIPVLALLFLGMGAVGQYNGLVDSYAEVENAQANVD
                     TQLQRRYDLIPNVVAAVKGAMEHEEEIFTAIAEARAKIGSSQQGTSDYNQAQSQLDAA
                     VSRLLVVAENYPQLTANQQVSDLITELEGTENRILVARKDYNAVATTYNKKIKRFPTS
                     IYAGLFGYEKVELFQATNDAATTVPSVDLSDKE"
     gene            1424..2887
                     /locus_tag="AC1PJC_002195"
     CDS             1424..2887
                     /locus_tag="AC1PJC_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0016600 - flotillin complex [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin family protein"
                     /protein_id="HIP6621155.1"
                     /translation="MDFGFDILAIMIPIIVVVLFVLLFVFGYVSAKPNEAIVITGLGK
                     PRTLIGRSGFMIPFIEKRSYISIEQFSTDVQTTDFVPTLDFINVKADAVVKVKVGVSD
                     ELLNAAAQNFLNWKTADISASIQDVLEGNLREIIGQMELRDMVNNRQAFAEKVQSNAA
                     PDLAKMGLEIIAFTVQSFTDDNDVIKNLGIDNIVTIQKDAANARAKAEREQAEVRARE
                     DKAANDARVAADLEIAKKQNELAIEQANLKRQSDVQLAQANAAYGIEEQAQRKEIERA
                     TAEANIVKQQKEAEVKAEEVKVREQELSATIRKQAEAEKYARQQAAEADLIERQRKAE
                     AELYETQREAEAQKARAEAAKYAAEQEAAGIEAKGRAEAEAIRLKLEAEAEGLSKKAD
                     AMAKFNDAAVTEMVVNVLPEIAKNIAAPLGNVDKITMYGEGNASKMVGDLMTTMDKTT
                     EGLGLNVRDLISATLTGRAMSTGLLTAQETKEAEEDK"
BASE COUNT          897 a          579 c          739 g          736 t
ORIGIN      
        1 tcggctgttt cgctattcta acggtttgct tgctatttgc tcccacacta gctagagcaa
       61 atcagattcc agaccgaccc acaggtacaa cggtagtgga tgagacgcag ttactctcta
      121 gtgagaccat tgcagaaatt gatcaactca atcgaaattg ggcaagcacc gagcaagctt
      181 tacaggttgg tgtttatgta acagaaagtc tgtccagtga tattgaaagt ttggctaatg
      241 aaacctttcg tcactggcag gtcggttttg caggaacgga caacggagtt cttttagtgg
      301 ttgccatagc tgacagagca tttcggatag aaacctcaga caatgctgcc acagtcatca
      361 cggatgtaga agccaaggat attctagaga atgcaaggga attctttcga caggaagact
      421 acagtagagg aatttcctat atcgtcaact ccattgggga tagattttat ggtacaagca
      481 tcggtaaaaa tcagttagct gctatagaag aaggtacaag tgaggagggt gacggctttt
      541 ggctgtttct cgtagttatt ctgatcgcta tcctatttgg tattattgac aaatctagtc
      601 gtggtggtgg cggaccaggt aatctactct ggatgttggt tgatgaccat catcactatc
      661 acaatcatca ctcgtctaat tcctcatcgt ctagttttgg cggaggtagt tggtcaggtg
      721 gtggaggcgg cggtggcgga gcctcttctg gatggtaagg catcgtatag ggcttctgat
      781 agttgtttgc ttttttacga atatttaatt gtagttagaa aggaaatctt atgaaaaaga
      841 aatggttggt catcctcata ccagtcctag ctctgctgtt tttaggaatg ggagcagttg
      901 ggcaatacaa tggcttagtt gacagttatg ctgaggttga aaatgcacaa gccaatgtag
      961 acacacagtt gcaacgtcgc tatgacttga tacccaatgt agtcgcagct gtcaaaggcg
     1021 ccatggaaca cgaggaagaa atatttactg ctattgcaga agcgcgtgct aaaattggtt
     1081 ccagtcaaca gggaacgagt gactataatc aagctcaaag tcagctagat gctgcagtat
     1141 ctagattgtt ggtagtggct gagaattatc ctcaattgac agccaaccaa caggtatcag
     1201 acctgattac agagcttgaa ggtacggaaa atcggatact ggtagcccgt aaagactata
     1261 atgcggtggc aactacctac aataaaaaaa tcaagcggtt cccgacctcc atctatgcag
     1321 gtctattcgg atatgaaaaa gtagagctct ttcaggcaac aaatgatgca gcgacgactg
     1381 taccaagtgt tgatttgagt gataaggaat gaaggagata aatatggact ttggatttga
     1441 tatattggca attatgatac caattattgt tgttgtacta tttgttttat tgtttgtatt
     1501 tggttatgtg tccgccaagc ctaacgaagc gattgtcatt accggcttgg gcaaacctag
     1561 gaccttaatt ggtcgttctg gttttatgat tccttttatt gaaaaacgct cctatatctc
     1621 tattgagcag ttttcaacag atgtgcagac cacagatttt gtaccgactc ttgattttat
     1681 caacgtaaaa gctgatgcgg tcgtaaaagt aaaggttggg gtatctgatg aattgctcaa
     1741 tgcggcagct caaaacttcc ttaactggaa aactgcagat atttctgcct ctattcaaga
     1801 tgtcttggaa ggaaatctgc gtgaaatcat tggtcagatg gagctgcgtg acatggtcaa
     1861 taaccgccag gcttttgcag aaaaagtcca atccaacgcg gctcctgact tggctaaaat
     1921 ggggctggaa atcatcgcct tcacggttca atccttcaca gatgacaacg atgtcattaa
     1981 aaacctgggt attgacaata ttgtgaccat ccagaaggat gctgcaaatg ctcgtgccaa
     2041 agcagagcgg gaacaagcag aagtccgtgc tcgtgaggat aaggcggcta atgatgcgcg
     2101 tgttgctgcg gacttagaaa tcgccaagaa acagaatgaa ctagctattg agcaagctaa
     2161 tctaaaacgt cagtcagatg tccaactggc acaggcaaac gcagcctatg gcattgagga
     2221 gcaagctcaa cggaaagaaa tcgagcgtgc aaccgctgaa gccaatatcg tcaagcaaca
     2281 aaaagaagca gaagtaaaag cagaggaagt taaggtccgt gaacaagagc tctcagctac
     2341 tatccgcaaa caggcagagg cagaaaaata tgctcgccaa caagctgcag aagcagattt
     2401 gattgaacgt caacgcaagg cagaagcaga actctacgaa acgcagcgtg aagcggaagc
     2461 tcaaaaagcg cgtgcagaag ctgctaagta tgctgcggag caagaagcgg caggtattga
     2521 ggccaaagga cgtgccgaag cagaagccat ccgtttgaaa ctcgaagccg aagcagaagg
     2581 tcttagcaag aaggcggatg ccatggctaa gtttaatgat gcagcagtga cagaaatggt
     2641 ggtcaatgtc cttccagaaa tcgccaagaa tattgcagca ccacttggaa atgttgataa
     2701 gattaccatg tacggcgaag ggaatgcctc aaaaatggtg ggagacctga tgacgaccat
     2761 ggacaagaca acagaaggtc taggcctcaa tgtccgtgat ttaatcagcg caaccctaac
     2821 tggtcgtgcc atgtcaacag gtttactgac tgcacaagaa acaaaagaag cggaagagga
     2881 caaataaaaa taataagcag ttggaagaga tgggtgactg agtaggttta caccaccatt
     2941 tccatcgcat g
//
LOCUS       DBNFCX010000163         2882 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.164, whole genome shotgun sequence.
ACCESSION   DBNFCX010000163 DBNFCX010000000
VERSION     DBNFCX010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2882)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2882)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2882
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.164"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..1029
                     /locus_tag="AC1PJC_002196"
     CDS             <1..1029
                     /locus_tag="AC1PJC_002196"
                     /inference="COORDINATES: protein motif:HMM:NF012298.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase domain-containing protein"
                     /protein_id="HIP6621156.1"
                     /translation="YYKSNLEVFYNKVDVNEKTIIKIAINILEAMLIIESKNMVHRDL
                     KPNNILLNSVDDLVVCDFGLTKMKRDTVLTRTLQGMGTDYFSAPEQFENAKTVDIRVD
                     IYSFGRILIWLFTKETTYNINHELIPLKYRSLITKCVEQFPDNRYNSVNDVYDAFIQR
                     ISIGKKLTRKQILEEIMMDSSSYKNFLSISESEIDKFSEDELFELIANGKLDKWLMED
                     FDSFERIYALWEIKRDEYYRIRNFYPASRADSLAINFKKYILDGGIPLKVRISLFKKL
                     VNHWGNRYYVMDIIFDIISLKNNDEELVTFILDSLSEDDVARLKDFYSQVGKSHDNIS
                     PYFLHILE"
     gene            1089..2372
                     /locus_tag="AC1PJC_002197"
     CDS             1089..2372
                     /locus_tag="AC1PJC_002197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003054967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HIP6621157.1"
                     /translation="MGLLDLLGRKRARDKPRNSYEGQDFSYLFGRTTSGENVDEFKAM
                     QTTAVYACVRILAEAVASLPIHVYERTATGKEKKVEHPLYFLLHDEPNPEMSSFVFRE
                     TLMTHLLIWGNAYVQIIRDRSGQVISLYPLLPDKMSVHRDESGKLYYKYKRQSEENPN
                     FKEKGDAILRAEDVLHVPGLGFDGLIGYSPIALAKNAIGMTLATENYGASFFKNGANP
                     GGVLEHPGILKDPKRVRDSWNAVYNGVTNAHKVAVLEEGMKYTQVGIPPEEAQFLQTR
                     KFQINEIARLYRIPPHMVGDLEKSSFSNIEQQSLEFVKYTLDPWVVRLEQAFKRSLFL
                     PEEKKTYFVKFNVDGLLRGDYQSRMNGYAIGRQNGWLSTNDIRELEDLNLLSDEEGGN
                     LYLINGNMMKLKDAGGFMKQAPVEQETQFREELDA"
     gene            2365..>2882
                     /locus_tag="AC1PJC_002198"
     CDS             2365..>2882
                     /locus_tag="AC1PJC_002198"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003084543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0046797 - viral procapsid maturation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="head maturation protease, ClpP-related"
                     /protein_id="HIP6621158.1"
                     /translation="MHKFWNFTEDDSGRTLRIEGQIADETWFGDEVTPQVFKNDLHAG
                     SGDITLWINSPGGDVFAAAQIYNMLMDYKGDVHVVIDGLAASAASVIAMAGTTVSMSP
                     VAMMMIHNPWTMAQGEAKDMQKVIEMLGEIKESIINAYELRTGLSRTKLSHLMDSESW
                     FNAKKAVELGFA"
BASE COUNT          947 a          465 c          629 g          841 t
ORIGIN      
        1 tactataagt caaatttaga ggtgttttac aataaagttg atgtgaatga aaaaacaata
       61 attaaaattg ccataaacat attggaggcg atgttaatta ttgaatcaaa aaatatggtt
      121 catagagact tgaaaccaaa taatattttg ttgaattcag ttgatgacct ggttgtttgc
      181 gattttggat tgaccaaaat gaaaagagat acagtattaa cccgaacttt gcagggaatg
      241 ggtacagatt acttctcggc tcctgaacaa tttgaaaatg caaaaacggt tgatattcga
      301 gtggatatct atagttttgg tcgtatttta atttggctgt ttacgaagga gacaacctat
      361 aatattaatc atgagttaat accgttaaag tatcgaagcc tgataactaa atgtgttgaa
      421 caatttcctg ataatagata taattcagtt aatgatgtat atgatgcttt tattcaaaga
      481 atttcaattg gaaaaaaact tacaaggaaa cagatacttg aagaaataat gatggattct
      541 agttcttata aaaatttcct ttcaatatca gaatcagaaa ttgacaaatt ttcagaagat
      601 gagctgtttg aactaatagc taatggaaag ttagacaaat ggttgatgga agattttgac
      661 tcatttgaac gaatatacgc cttatgggaa attaaaagag atgaatatta tcggattaga
      721 aatttttatc ctgcaagcag agcagattct ttagcaataa attttaaaaa gtatatctta
      781 gacggtggta ttccacttaa agtaagaatt tctctattta aaaaactggt aaaccattgg
      841 ggaaatcgat actatgtaat ggatattatt tttgatatta tttcacttaa aaataatgat
      901 gaggaattag tcacattcat attagattca ctttctgaag atgatgtggc tagattgaag
      961 gacttctatt ctcaagtggg gaaaagtcac gataatattt ccccgtactt tctacatatt
     1021 ctcgaataag tacatacaaa agcatctcaa gtcgaggtgc ttttttgcta acaaagtttg
     1081 gaggtaaaat gggactacta gatttactgg gacgtaagcg tgctagagat aaaccacgaa
     1141 atagttatga gggtcaggac ttctcatatc tgtttggacg aacgaccagt ggagagaatg
     1201 tggatgagtt taaagctatg cagacgactg ctgtctatgc atgtgtccgt atcttagctg
     1261 aagcggtagc ttcactaccc attcatgttt atgagagaac ggcaactgga aaggagaaga
     1321 aggtggaaca tcccctttat tttctcttac atgatgaacc taaccctgag atgtcatctt
     1381 ttgtctttag agaaaccttg atgacccatc tattgatatg gggcaatgcc tatgtccaga
     1441 ttatccgaga taggagtgga caggtaatca gtctttaccc actcttacca gataagatgt
     1501 ctgttcatcg ggatgaaagc ggaaagctct attacaaata caagcgtcag tcagaagaaa
     1561 atcctaactt taaggaaaag ggtgatgcta tcttgagagc agaagatgtt ctccacgttc
     1621 ctggtctggg ttttgatggc ttgatcggtt attctccaat tgcccttgcc aaaaatgcta
     1681 tcggtatgac attggctacg gaaaactatg gggcatcatt ctttaaaaat ggtgcaaatc
     1741 cgggtggcgt tttggaacac ccaggtattc tcaaagatcc caaacgagtg agagattcat
     1801 ggaatgcagt ctacaatggg gtaaccaatg cccataaagt ggcagttctt gaggaaggaa
     1861 tgaaatacac tcaagtaggc attccacctg aagaagccca gttccttcag acaagaaaat
     1921 tccaaatcaa tgaaattgca aggctctacc gcattccacc tcatatggtt ggcgacttgg
     1981 agaaatcctc attttcaaac attgagcaac aatctctaga atttgttaaa tataccttag
     2041 acccttgggt agttcgtctc gaacaggctt tcaagaggtc tcttttttta cccgaagaaa
     2101 agaaaaccta ctttgtgaag ttcaatgtag atggtcttct tcgtggtgac tatcagagtc
     2161 gaatgaatgg ttatgcgatt gggagacaaa atggctggct atcgacaaat gatatacgtg
     2221 aacttgagga cttgaacctc ctttcagatg aggaaggagg caatctctac ttgataaatg
     2281 gaaacatgat gaaactgaag gatgcgggtg gctttatgaa acaagcaccg gtagaacaag
     2341 aaactcaatt tagggaggaa ttggatgcat aagttttgga attttacaga agatgatagt
     2401 ggtcgaacac ttcgtataga aggacagatt gctgatgaga cgtggtttgg cgatgaagtc
     2461 acgccacaag tatttaaaaa tgatttacat gcaggaagtg gagacatcac cctctggatt
     2521 aatagtccag ggggtgatgt ttttgcggcg gctcaaatct ataacatgtt gatggattac
     2581 aaaggtgatg tccatgtagt gattgatggc ttagccgcaa gtgctgctag tgtcattgcc
     2641 atggcaggta caacggtttc tatgagtcct gttgccatga tgatgataca caatccttgg
     2701 acaatggcac aaggtgaagc caaagatatg cagaaagtca ttgaaatgtt gggagaaatt
     2761 aaggaatcca tcatcaatgc ctatgaacta agaacaggac tttcaagaac caagctatca
     2821 cacctcatgg actcagagtc ttggttcaat gccaaaaagg ctgttgaact gggctttgca
     2881 ga
//
LOCUS       DBNFCX010000164         2867 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.165, whole genome shotgun sequence.
ACCESSION   DBNFCX010000164 DBNFCX010000000
VERSION     DBNFCX010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2867)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2867)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2867
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.165"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(159..1502)
                     /locus_tag="AC1PJC_002199"
     CDS             complement(159..1502)
                     /locus_tag="AC1PJC_002199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HIP6621159.1"
                     /translation="MKLARRQFIIVTSLILVALLYFAMPIYYNQHRRQELRDNFNLVI
                     SNLDGQSNEDILTNIEKYDLNRPDLLYSLFDSNGERLWPREELITDDQGRHPNYKNLS
                     SYDEVGSWSTTLISKEDSTYILMAEYGFTSLSQVSQSLLTFYPFVMILIVILALIVGA
                     IYSKLSTRRIALISETARKMQSLESGIECQVIGQDEISVLAQDVNRLYSKLLMSIEEL
                     RMETKQAQNREREKSEFLRMTSHELKTPIASMMGFIDGMIYNVGEFADRDRYLRECRI
                     ILQEQSELVHSILDATNVEISTWNRQEFFQLNELLQSTMSNYQALALVNRYQFSTILS
                     PTAIKGDRILLMKALKNIIDNAFRYSRPEGKISLICKQGTFIIDNEVAQVLPEEEIEK
                     IFLPFYRPDYGRAKQDGGTGIGLYLVKQVLDKHGFSYSFTSVGDSTMRFRIDFES"
     gene            complement(1503..2153)
                     /locus_tag="AC1PJC_002200"
     CDS             complement(1503..2153)
                     /locus_tag="AC1PJC_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HIP6621160.1"
                     /translation="MAKILVLEDDVAINKVICEFLRDSGHDVLPLFDGGQALKEVRKV
                     EFDLLILDILVPTLTGLELLTEIRKTSSVPVLVLTALSDEYTQLISFGHGISDFVAKP
                     FSPLVLMKRVENILKARHIDETIRIGDIVIDQQAGFVYMRDKEVQLTRKEYEVFLFLA
                     KRKDKIVSRDNLMMGIWGYTELDSRVLDNHIKNIRKKLPSLHLKTVVGRGYQIEEG"
BASE COUNT          978 a          602 c          388 g          899 t
ORIGIN      
        1 ttgccctatc tatttaaaat aatttatata tataaatatt ttccctacct atccgttcac
       61 ataaattaca ttaaaattta cacaattaaa cctactatcc ccttaggaag tataatccca
      121 gaaaatattt cttgtagaga gtgtttaatg aaaagtggtc aggattcaaa atcaatcctg
      181 aaacgcatgg tagaatctcc gaccgatgta aagctataag agaaaccatg tttatcaaga
      241 acttgcttta ccaaatacag cccgattcct gtcccaccat cctgcttggc cctaccatag
      301 tctggtctat aaaaaggaag aaatattttt tcaatttcct cttcaggcaa cacctgagcc
      361 acttcattat ctatgataaa tgtcccctgt ttgcaaatta gactaatctt cccttctgga
      421 cgactatatc gaaaagcgtt atcaataata tttttcaaag ctttcatcaa taaaatacga
      481 tcacctttta ttgcggtcgg cgacaatatt gtcgaaaatt gataccgatt aacaagcgct
      541 aaggcttgat aatttgacat cgtactttga agcagttcgt tcaactggaa aaactcttga
      601 cgattccaag tggaaatttc cacatttgtt gcatctaaaa ttgaatgcac caactctgat
      661 tgctcttgta aaataatccg acattctctc aaataacgat cacgatctgc aaattcacca
      721 acattataaa tcatcccgtc tataaaaccc atcatactag caataggggt ttttaattca
      781 tgagaagtca tccgaagaaa ttctgatttt tctcgttctc tattctgcgc ctgtttcgtc
      841 tccattctca actcttcaat actcattaac agtttagagt agagacgatt cacatcctga
      901 gccaaaacag aaatttcatc ttggccaata acttgacatt caatcccgct ttccaaactt
      961 tgcatcttgc gtgcagtctc tgaaatcaaa gcaattcgtc gagtagacaa tttactataa
     1021 atggctccca caatcagtgc cagaataaca atcaagatca ttacgaaagg atagaaggtc
     1081 aagagtgatt gactgacttg tgaaagacta gtaaaaccat attcagccat taaaatatat
     1141 gttgaatcct ctttagaaat aagagttgtc gaccatgacc ctacttcatc ataggagcta
     1201 agatttttat aattgggatg tctcccctga tcatcagtta tcaattcttc tcttggccag
     1261 agtcgttcac cattactatc aaaaagacta tacaataaat ctggacgatt caaatcatac
     1321 ttttcaatat tggtcagaat atcttcgttc gattgaccat ccaaattaga aataaccaga
     1381 ttaaaattat cccgaagttc ttgacgtcta tgctgattat aataaatcgg catggcgaaa
     1441 tagagtaggg caacgagaat gagggaggta acgataataa attgtctacg ggcaagtttc
     1501 atctaaccct cttcaatttg gtaaccacga ccaactaccg tttttaagtg taagctaggc
     1561 aactttttac gaatattttt tatatgatta tctaacacgc gactatccaa ttctgtatac
     1621 ccccaaattc ccatcattag attatctcga ctcacaattt tatcttttct tttagcaagg
     1681 aagaggaaga cctcgtattc cttcctcgtt aactgcactt ctttatccct catataaaca
     1741 aaaccagctt gttgatcaat gacaatatca cctattctaa tcgtttcatc aatatgtctt
     1801 gctttcaaaa tattctccac tcgcttcatt aaaacaagtg gagaaaaagg cttcgccaca
     1861 aaatcactga taccatgtcc aaagctgatt aattgagtat attcatcact taaagctgtc
     1921 aaaactagca caggaacaga agaagtcttt ctaatttctg tcagtagctc caatcctgtc
     1981 aatgtcggca ccaaaatatc taatatcagt aaatcaaatt cgactttcct aacctctttc
     2041 agagcttgcc caccatcaaa caacggcaaa acatcgtgac cactgtctct taaaaattca
     2101 caaataacct tattaatagc tacgtcgtct tctaatacta aaatttttgc catccctctt
     2161 taccctttcc taaaatgata ataactctcc taaaaattaa taattagttc aaactatgag
     2221 taaaaaatta acagtttcat ctatatattc ccaagtatct gtcagaaatc ccacaccctg
     2281 gtctcaaaac cacctataca acaagcaacc gagtctcccc tataataaaa tgttcaagca
     2341 ggataggatt cttaatttct cattagaaat aacaaaattg atacctaaat aggtcataag
     2401 cccttcggtg ttagctgttt tttgaaaaaa gatcatattc cagcacacct tatattccca
     2461 ataaaggtca ttcattttag caaaaagtat tatataccta attgcccaaa aaggcaaata
     2521 aggtattcta taataaaaca aatatgatta gtgttacaat tactttaaca acatatacaa
     2581 aaaaacagaa aaaaattaca tgaaacacgg ttttttggta gattattttg atattattat
     2641 aaagcaagtg tgatcggaat aatttgaata tcaacctagc cattcacttt ttagtatttg
     2701 ctagatttga ttggtcttat atatttatag ttgcattcag caaactattt tcccccaaaa
     2761 atatacgact aatttttcaa aaatatgttg taaatcctcc cccaggtaat atacaactcg
     2821 tttaatcact tgcttggtaa aaagagagag caatcacgtt aactgtg
//
LOCUS       DBNFCX010000165         2820 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.166, whole genome shotgun sequence.
ACCESSION   DBNFCX010000165 DBNFCX010000000
VERSION     DBNFCX010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2820)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2820)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2820
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.166"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..1419
                     /locus_tag="AC1PJC_002201"
     CDS             <1..1419
                     /locus_tag="AC1PJC_002201"
                     /inference="COORDINATES: protein motif:HMM:NF025805.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pre-toxin TG domain-containing protein"
                     /protein_id="HIP6621161.1"
                     /translation="SGSQTDPLSQNLYAYVQNNPANYTDPSGHIGRPNINLPDSRGSR
                     QPKRSSQSKSNQSKVYPIFPSGTSIIDQQLIIANQSAAQGLVDAQKRFIQETKGYSYN
                     PIVDMFRDPLGPSRSPIDYGSTPFATITRSYIDSVLTTARQTVYTPPPSDYERAVQSG
                     QSTYDWSRSTTREAKNIHRNWTKALEETIRHVCNTQTAKGKDSGTRNKPNISVADFRK
                     IEEANKYGLTVAQKERIDKMTLDQYLQSPQMTAEEILYARQVKFASYTEARKDVFPTF
                     VAELSGWNNIQRLKDGVDPTTGEQANRWFAAGELSLDLASNLLPFLKAGKITQLGKIL
                     DATDDVVDTFDYVSDVAKTTDKLDDVDDAQDSLQVAENLGDVSKGYQAPKGGGGTTTT
                     ILKGEVTITFGHGARHFEDIPNLKVSEVEEAIAQHVVKNPPKIGESPRVTISVNGQVV
                     EYRPFNLGDGRINIGTYIPKNK"
     gene            1430..1789
                     /locus_tag="AC1PJC_002202"
     CDS             1430..1789
                     /locus_tag="AC1PJC_002202"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621162.1"
                     /translation="MREANDLEKKWFALMMKADFEGKEIISEQLSTVFISSEEITKSF
                     ASIKLGTLTNKCYPFQERVPITMLAYVQDNRGLRPIEFLLHVVNGFVNELEIFDAAGF
                     DIEDYSSIPLDNIKYLT"
     gene            2115..2255
                     /locus_tag="AC1PJC_002203"
     CDS             2115..2255
                     /locus_tag="AC1PJC_002203"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621163.1"
                     /translation="MAIELIPEEKQAFLDINFLERYEKFAISRQFPEEMKQSVPSHLQ
                     TS"
     gene            2278..2592
                     /locus_tag="AC1PJC_002204"
     CDS             2278..2592
                     /locus_tag="AC1PJC_002204"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621164.1"
                     /translation="MGYKVTYNSREKFFRFSIAKDEATGLEAFLTIDVRLGFVELIWY
                     VNKHGEPYAGSVLALVSRLLILPDYRIPYPDVRSYEELREGLEENISLYLEFFEALKK
                     YQ"
BASE COUNT          950 a          492 c          611 g          767 t
ORIGIN      
        1 tcaggtagtc aaacagaccc gctcagccaa aacctctatg cctatgtgca gaacaaccca
       61 gccaactata ccgacccgag tgggcatatt ggtagaccga acataaactt accagatagt
      121 agaggttcgc ggcaaccaaa aaggtcttct cagtctaagt cgaatcagag taaagtctat
      181 ccaattttcc caagtggcac ctctattatt gatcaacaat tgattatagc gaatcagagc
      241 gcagctcaag gattggtaga tgctcaaaaa cgctttatcc aagaaacaaa aggttatagc
      301 tataatccaa tagtggatat gtttagagat ccattggggc cttcacgctc tccaatagat
      361 tatggttcga ccccatttgc gacgattacc cgttcctata tagattctgt tttgaccaca
      421 gcacgccaaa cagtctacac tccaccacca agtgactatg aaagagctgt acaatccggt
      481 caatccactt atgattggag ccgctcaaca acaagagaag caaagaatat tcatagaaac
      541 tggaccaagg ccttggagga aaccattcgt cacgtgtgca atacacagac tgccaaaggt
      601 aaggactcag gtacccgaaa caagccaaat atcagtgttg cggatttccg caagattgaa
      661 gaagccaata agtatggatt gacagtggct caaaaagagc gcattgataa aatgacactg
      721 gatcagtatc ttcaatctcc gcaaatgaca gcggaagaaa tattgtatgc tcgtcaggtt
      781 aaatttgctt cctatacaga agcaagaaaa gacgtatttc caacgtttgt tgcagagtta
      841 agcggatgga ataacattca gcgtctgaaa gatggggttg atccgacaac aggtgaacaa
      901 gcgaatcgct ggtttgcagc aggagaactc tctcttgatt tagcaagtaa tctattacca
      961 tttttgaaag ctggaaaaat tacccaatta ggtaagattc tagatgcaac tgatgatgta
     1021 gttgatacgt ttgattatgt tagtgatgtt gcaaaaacta cagataagtt ggatgatgta
     1081 gatgatgcac aagatagttt gcaggtggct gaaaatctgg gagatgtaag caagggttat
     1141 caagctccta aaggaggcgg tggaacaact acaaccattc tcaaaggaga ggtgacaata
     1201 acgtttggtc atggagcaag acattttgaa gatattccaa atttaaaagt ttcggaagta
     1261 gaggaagcaa tagctcaaca tgttgtaaaa aatcctccga aaataggaga gtctccaaga
     1321 gttacaatta gtgtaaatgg tcaagttgtt gaatatagac cttttaattt aggagatggt
     1381 agaatcaata ttggaacata tattcctaaa aataagtgag gttacggaaa tgagagaagc
     1441 aaatgacttg gaaaaaaaat ggtttgcatt gatgatgaaa gcagattttg aagggaaaga
     1501 aattatatca gagcaattat cgactgtatt tattagctct gaggaaataa ccaaaagttt
     1561 tgcttctatt aaattaggaa ctttgacaaa taaatgttac ccttttcaag aacgagtgcc
     1621 gattacaatg ctggcatatg ttcaggataa tagaggattg cgaccaatag aatttttact
     1681 acatgtggtt aatggatttg tgaatgaact tgaaattttt gatgctgctg gctttgatat
     1741 tgaagattat tccagtatcc cacttgacaa tattaagtat ctaacctagt aaatctacga
     1801 agtttactta gctaacggca aacgcttgga tagctatgac ccagtagctg gagaaattat
     1861 ctctcggaag gcaactgact tggataagat tcaagaaagt acctttaggg gttatttgag
     1921 tgagtttgaa aaaaatactc agtggggact gagattcgct cacaaaaata taaggaacag
     1981 ctctacggag aaaccttaca gggatcttat atcttggagg ttccagcctc taatgcgaag
     2041 ctacctaata ttgatgatta taaatagatt gtatcagaat acgatgtgat acttagattt
     2101 acggaggaat agacatggca atagaactaa taccagaaga aaaacaggca tttttggata
     2161 taaacttttt ggaaagatac gagaagtttg cgatttctag acaatttcca gaggaaatga
     2221 agcagtcagt tccaagtcat ctacaaacca gctgaggtta aagaacttat tgaaagcatg
     2281 ggctataagg ttacttacaa tagtagagag aaatttttcc gcttctcaat tgccaaggac
     2341 gaggcgacag gattagaagc atttctgacg attgatgtta gacttggttt tgtagagcta
     2401 atttggtatg taaataagca cggagaacca tacgcgggta gtgtactggc tttagtatct
     2461 agattactta tattaccaga ttaccgcatt ccttatccag atgttcgttc atatgaggag
     2521 ttgagagaag ggttggagga gaatatcagt ctttaccttg agttctttga agcattgaag
     2581 aaatatcagt agtttactta gaagtcatat gaaatcatct agaattttct agatgatttc
     2641 tttttggtat ggtagaataa atgtgagttg tttggaagca gactgtttct gcatcaacta
     2701 gctgagaagc tctgctattt ccctaaaagc tgacagctat ccaggtagtc aaacagaccc
     2761 gctcagccaa aacctctatg cctatgtgca gaacaaccca gccaactaca ccgacccgag
//
LOCUS       DBNFCX010000166         2810 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.167, whole genome shotgun sequence.
ACCESSION   DBNFCX010000166 DBNFCX010000000
VERSION     DBNFCX010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2810)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2810)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2810
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.167"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            107..2629
                     /locus_tag="AC1PJC_002205"
     CDS             107..2629
                     /locus_tag="AC1PJC_002205"
                     /inference="COORDINATES: protein motif:HMM:TIGR04320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEC10/PgrA surface exclusion domain-containing
                     protein"
                     /protein_id="HIP6621165.1"
                     /translation="MTKQNNKLQTKGSIRKLRTGAVVSTLATSVIFGSAVSAEEVATT
                     EVATTTEAVAVSEEVAQPVEVTQADVDSAQANVTELTNQVTAQEEVVAQVSTQVEELS
                     AVTPEVVAELETATVKAEETVAQAETNVATAEQTVAPAKEAVTSQEGIVSEAEKAVNE
                     ANTTVANAEKAVTEAQAEVDGLENIDETLKEAQATVVADEKAVEVATTQVDNIKVAEQ
                     DKAQAIATQEGIVSEAKTVVDTKSQALATAKTELATATNKVTETKATLDGLTAKATGE
                     ETQLTIPISAEYVNTLKEYFAGGSRDTNLSNRLKELGAEAFAQFGVALEGFDGSYIKF
                     LNTDSVLKYSDYDKSRKVDVANLTDAQRAELTDYFLTIIKPVREAYGVSEFKTSDKMN
                     AIASRLEDVTNTSLYGHDMSAQLKVAREFGLLGLSENLGYPASDDGVETMATLKRDIF
                     GQVMQMLYDDSHARWGHARNFLTDAINYVSIGVTESTINPAYEVARKLHFTLASGTHM
                     AKLQDTNVHTAPASATDTQATALANAKTAYNTALTQQTTASQKVSAIEFELQNAQFAY
                     NSAKAELDRLKSGTSNLADAERTLADATARLSVSRQKLVEVQSTYNNLKTKEAEAKQT
                     LADAQKTLENAEITQAQAVARLDSEKVTLATLQGKLATAQGILDKARSTYAEAIQVRD
                     ELKAKLETARNAGTALAQAKADLEVAETRLADLKGILGQAEANLAYLKSLLPITSKGE
                     PAYHELPTLEIPKELLDKAEVDGKIDNKVDNTVANKVDAPVVAPTVSTPKVATPSKVG
                     VEHGTSAEVLPNTGESENIMLYIGIGLLGLAGLSKKRNKRTI"
BASE COUNT          842 a          556 c          637 g          775 t
ORIGIN      
        1 agaagaaact tcttaaaagg tttttaatta tatgttttag ttgttaaaag ctaaaaaata
       61 cgatataata accttaaaag attagtttgt tacatatgga ggttttatga caaaacaaaa
      121 taataaattg cagactaaag gttcaatccg taaacttcgc acaggtgcag tggtatctac
      181 actcgctacc tcagtgattt ttggttcagc agtttcggct gaagaggttg ctactacaga
      241 ggtcgctacg actactgagg cggttgcagt ttcagaagag gttgctcagc ctgttgaggt
      301 gactcaagct gacgttgaca gtgcccaagc aaatgtcact gagcttacaa atcaagtgac
      361 agctcaagaa gaagttgttg ctcaggtttc tactcaagtg gaagagttgt ctgctgtaac
      421 gccagaggtc gttgctgagt tggaaacagc tacggttaag gctgaggaaa cagttgccca
      481 agcagagacg aatgttgcta ctgctgaaca gacagttgct ccagctaaag aggctgtaac
      541 ttcgcaagag ggtatcgttt ccgaggctga aaaggctgtc aatgaggcaa acacaactgt
      601 tgcaaatgca gagaaagctg taactgaggc tcaagctgag gttgatggtt tagaaaacat
      661 tgacgaaacg ctcaaggaag ctcaagctac tgttgtagct gacgagaaag ccgttgaggt
      721 tgcaactact caggttgaca acatcaaggt tgccgagcaa gacaaggctc aagctattgc
      781 cactcaagag ggtatcgttt ctgaagctaa gactgttgtg gacactaaat ctcaagctct
      841 tgccacagct aagactgagt tggctactgc aactaacaag gtgactgaaa ctaaggctac
      901 tttggatggt ttaactgcta aggctacagg tgaggagact cagttgacta ttccgatttc
      961 tgctgagtat gtaaatactc ttaaagagta ctttgcaggt ggtagtcgag acactaatct
     1021 gtcaaaccgt ttgaaagagt tgggcgctga ggctttcgct cagttcggag ttgctcttga
     1081 aggtttcgat ggtagttaca ttaagttttt gaataccgat tcagtgttga agtactcaga
     1141 ttacgataag tcacgtaagg ttgacgtagc taaccttaca gacgctcaac gtgctgagtt
     1201 aactgactac ttccttacta tcatcaagcc tgttcgtgaa gcctacgggg tatctgagtt
     1261 taagacctca gataagatga atgcaatcgc ttctcgtttg gaggatgtta caaacacaag
     1321 tctttatggg catgatatgt ctgcacagct aaaagttgct cgagagtttg gtctattagg
     1381 tctttctgaa aacttaggtt acccagcatc tgatgatggt gtagaaacta tggctacact
     1441 taagcgtgac atattcggtc aagttatgca aatgctttac gatgattctc atgctcgttg
     1501 gggacatgca cgtaacttct taactgatgc gattaactat gtgtcaattg gggtaactga
     1561 gagcacaatc aaccctgctt atgaagttgc tcgcaagcta cacttcactc ttgcttcagg
     1621 cacgcacatg gctaagctcc aagataccaa cgtccacact gccccagcat ctgcgactga
     1681 cacacaagca acagccttag ctaacgctaa aacggcttac aacacagctt tgactcaaca
     1741 aaccactgca agtcaaaagg tttctgctat tgagtttgag ttgcaaaacg cacaatttgc
     1801 ttacaattct gctaaagctg aacttgaccg tttgaagtca ggtacatcta accttgcaga
     1861 tgcggaacgt actcttgcag acgcaacagc tcgcttgagt gtaagtcgtc aaaaactggt
     1921 tgaggttcaa tctacctaca acaacttgaa aacaaaagaa gccgaagcta aacaaacctt
     1981 ggctgatgct caaaagacac ttgaaaacgc tgagattact caggctcaag cagttgctcg
     2041 tttggactct gagaaagtta cccttgcaac tcttcaaggt aagttggcaa cggctcaggg
     2101 tatcttggac aaagcacgct ctacttatgc tgaagccatc caagttcgtg acgaattgaa
     2161 ggctaagttg gaaactgctc gcaatgcagg tacagctctt gctcaagcta aggctgactt
     2221 ggaagttgct gaaactcgtt tggctgactt gaagggtatc ttaggtcaag cagaagcgaa
     2281 ccttgcttac ttgaagtcac ttcttccaat cacttctaaa ggcgagcctg cttaccacga
     2341 attgccaact cttgaaattc caaaagaatt gctagacaag gctgaggttg acggcaagat
     2401 tgacaataaa gttgacaaca ctgttgctaa caaggttgat gctccagtgg ttgctcctac
     2461 agtttcaact cctaaggtgg ctacaccgtc taaggttggg gttgagcatg gcacgtctgc
     2521 tgaggtgttg ccaaatacag gagaatctga aaatatcatg ttgtatatcg gaatcggtct
     2581 gcttggtttg gctggtttaa gtaaaaaaag aaataaaaga acaatttaat taagataact
     2641 aaaaaatctt cttacatatt gtaggaagat tttttggatt cctaaaaatt tcagaaagac
     2701 tacgctattc taacaatttt taggaatgtt aatagaattt taaatttttt agttactccg
     2761 aaatgcttct ttgtcaaaac ttggtcagac tgtattttta taaaaattct
//
LOCUS       DBNFCX010000167         2746 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.168, whole genome shotgun sequence.
ACCESSION   DBNFCX010000167 DBNFCX010000000
VERSION     DBNFCX010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2746
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.168"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..1953
                     /locus_tag="AC1PJC_002206"
     CDS             <1..1953
                     /locus_tag="AC1PJC_002206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018378354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat-associated core domain-containing
                     protein"
                     /protein_id="HIP6621166.1"
                     /translation="MAALYDGDDNRVFTASRKEGKNTYQLFQRKPKDTSRSGGKKSPY
                     TAPAGEENSIFWYGFSQNVLQSLSTLPQTVGTIWHEIFDDVSTAYHQKVAKDRATKEG
                     LVVNPPDLGNLPGEGDVTYASEVADVLIPYTTREDTYHYYEERNYVNDVNREHTEVLQ
                     TYDRELKAKDTYTYGHGRSSYLDNQTDKSYDYLTNQAGSVTGLAQDGQVVASSSYDLY
                     GSTKESTDETGNPFAYNGEARDVTGLDYLRARYYDSQAGTFLTEDSYQGELTDPLSQN
                     RYSYVHNNPVNYTDPSGHFWKSIKKAASKAWNGVKKAASNAWNTVKRVATNTWNTVKS
                     AVSHAVNWVGNKVSQAVNWVGTQVNHVKNWAVQQWNNYHSAPSYQASSGSYGGGYHSP
                     SSSHAYAQQQQAQARAQAEQRRQQHIRDEYSQSTGIKTTPKTREAKSMFRNWGKALKE
                     MYTHVCKTAKRVKKQVANYVKKIDWKKVAVTAGAIGVGIALTVATGGLGAPVAMAIGG
                     AASGAIMSGYDAYSSGQRGWALAGSALKGAGLGAITGFVGGQFIGAGANVATNVTQNI
                     ANQTVRHVAKAGVEAGVETAIDTGISLATGNPISLKNVVTDYGLNLVTNGSGSVSSKK
                     SAKADVNTSKPKAGDVQVNKTKPSSC"
     gene            1916..2578
                     /locus_tag="AC1PJC_002207"
     CDS             1916..2578
                     /locus_tag="AC1PJC_002207"
                     /inference="COORDINATES: protein motif:HMM:NF012234.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HIP6621167.1"
                     /translation="MSKSIRLNHRVARIIAKIYKSLGILSEGQLIEVDRADLVAGYVG
                     QTAIKTREVIDKALGGILFIDEAYTLAKGGTDFGQEAIDTILKAMEDKRDDFVVIVAG
                     YSDPMNDFLESNPGLRSRFNKLIHFPDYTAEELLEIFNSYCQTNEMRISSDASLILKH
                     YLQEICDKKPLNFANGRAVRNIFETSLSLQANRLAQKEQINDDELMLITAEDLSFTQQ
                     EM"
BASE COUNT          824 a          553 c          669 g          700 t
ORIGIN      
        1 atggcagccc tttatgacgg cgatgataat cgtgtgttta ccgccagtcg taaagaagga
       61 aagaatactt accagctctt ccagcgaaaa ccaaaagata cttctcgttc aggaggtaaa
      121 aaatctcctt atactgcacc agcgggtgag gaaaatagta tcttctggta tggctttagt
      181 cagaatgtcc tccagtcgct ctctaccttg ccacagactg taggaaccat ctggcatgag
      241 atcttcgatg atgtctcaac agcctatcat caaaaagtgg ctaaggatag agccactaag
      301 gaaggtcttg tggtcaatcc gccagatttg gggaatcttc caggtgaggg ggatgtgacc
      361 tatgccagtg aagtggcaga tgtccttatc ccgtatacga cgagggaaga cacctaccat
      421 tactacgaag agcgcaacta tgtcaatgat gtcaaccgag agcataccga agtgctccag
      481 acctatgacc gtgagctgaa agctaaggac acctacacct atggacatgg cagaagttct
      541 tatcttgaca atcagacaga taagagttat gattacctga ccaaccaagc agggtctgta
      601 acaggcttgg ctcaggacgg ccaagtagtt gcttcaagct cttacgacct ctatggttca
      661 accaaagaaa gcactgacga gacaggcaac ccatttgcct acaacggtga agctcgtgat
      721 gtcactggac ttgactatct gcgtgctcgt tactatgata gtcaggctgg aactttcctc
      781 accgaggatt cctaccaagg tgagttaacc gatccgctca gtcagaatcg ctacagctat
      841 gtccataaca acccagtcaa ctacaccgac ccgagtggac acttctggaa gagcattaag
      901 aaggcagcaa gcaaagcttg gaatggagtg aagaaagcag ccagcaacgc ttggaataca
      961 gtgaagcgag ttgcgacaaa tacgtggaat acagtgaaaa gcgctgtatc ccatgccgtg
     1021 aactgggtag gcaacaaggt cagtcaggct gttaactggg ttggcactca agttaaccat
     1081 gtcaagaact gggcagttca gcagtggaat aactatcact cggcaccaag ttaccaggcc
     1141 tcatcaggca gttatggtgg agggtaccac tctccaagta gcagtcatgc ctatgctcag
     1201 caacaacagg cccaagctag agcccaagcc gagcaacgcc gtcagcaaca tattcgagac
     1261 gagtatagcc agtcaacagg aatcaagacg acacctaaga cacgagaagc taagagcatg
     1321 ttccgtaact ggggtaaagc ccttaaggaa atgtacacgc atgtgtgtaa aacagctaaa
     1381 cgtgttaaga aacaagttgc caactatgtt aagaagattg actggaagaa ggtagcggtc
     1441 actgcaggtg ctattggtgt tggtattgcc ctcacagtag caaccggtgg tttaggtgct
     1501 ccagtagcga tggctattgg cggtgcggct tctggagcca ttatgtctgg ctacgatgct
     1561 tatagctctg gacaacgcgg ttgggctcta gctggttctg cacttaaagg agcaggacta
     1621 ggggctatta caggttttgt aggtggtcaa tttattggtg ctggtgccaa tgtggccact
     1681 aatgtgacac aaaatattgc caatcagact gttcgtcatg ttgcgaaagc gggtgttgaa
     1741 gctggtgttg agacagccat agatacggga atctcccttg cgacagggaa tccaatttct
     1801 cttaagaatg tcgtgacaga ctatggtctc aatctcgtta ctaatggttc aggtagtgtt
     1861 tcaagcaaga aatctgccaa agcggatgtc aatactagca aacctaaagc tggagatgtc
     1921 caagtcaata agactaaacc atcgagttgc tagaatcatt gctaagattt acaagtcttt
     1981 ggggatttta tcagaagggc agttgattga agtagatcgg gctgacttag tagctggtta
     2041 tgttgggcaa actgcaatca agacgcgaga ggtaattgac aaggcactgg gtggaatctt
     2101 atttatcgat gaggcctaca cattggctaa aggtgggaca gattttggtc aagaagcgat
     2161 tgatacaatt ttaaaagcca tggaagataa gcgcgatgat tttgtagtta tcgttgcagg
     2221 atattctgat ccaatgaatg atttcctgga atcaaatcct ggtttaaggt cgcgtttcaa
     2281 taagttgata cattttcctg attatactgc agaagaatta ttggaaattt ttaactcata
     2341 ttgccagaca aatgagatgc gaatttcatc cgatgcaagc cttattttaa aacattattt
     2401 acaagagatt tgtgataaga agccgctaaa ttttgcaaat ggtcgagcag ttcgaaatat
     2461 ttttgaaact tcattgtccc ttcaagctaa tcgtcttgca cagaaagagc agattaatga
     2521 tgatgaattg atgctaatta cagcagaaga cttgtctttc actcagcaag agatgtgacc
     2581 tgcaaagaaa aatggaagaa gtttctcgaa tttggtgact agaaatagtt gaatgtagat
     2641 aaatggaaca gtctttttcg ttgctaaact ttgaaattga ttgaaatggt ctctgactta
     2701 tactcaatat taataacatc tgagattgat tgtcgaagta aatgtg
//
LOCUS       DBNFCX010000168         2714 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.169, whole genome shotgun sequence.
ACCESSION   DBNFCX010000168 DBNFCX010000000
VERSION     DBNFCX010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2714)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2714)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2714
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.169"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..1670
                     /locus_tag="AC1PJC_002208"
     CDS             <1..1670
                     /locus_tag="AC1PJC_002208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002904855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF262 domain-containing protein"
                     /protein_id="HIP6621168.1"
                     /translation="QCDQLIEDINQHMENFDKDSQDNYFFGAVLIAQESGEDHDVTLI
                     DGQQRTTTFMLLLKALLLKVENELANQPLNDADGRRLIKRLNGLKEQIASMLFNMTED
                     ELDDFVDGLSFPTVEMIKYINDSISEKYAFDMQAILLGRNFDEIKQNVHQIYRRQKDN
                     RYTNFYKNFRYFYNTCNELSVINCINFANHFIKNCQVITITSFNTDQAINIFNSLNGT
                     GVPLTPIEVIVSKTTASAADRKTFETNWQEIVERADKSNLDLNTLMTHYIFTKLSQQN
                     GNERRNPGIRAFFNKNKSLLNFDTVFTNDLKKILQTYLLTSETSIGRVVSQLNGNLKP
                     FVSSYLFFRDDKSYIEYLMRIGILIELSELSYSHRLFKGFLEEINLMYSQVDAFSTES
                     LIDKVREHIRLNFEYENIKQTLLESGVSNAILYVNEYLFASENGIELQLDGNIDIEHI
                     MPQSGINRDHIMRDIGVNDPDEFREYAEKLGNKILLEAEINRGIGDAWFRTKKENHIT
                     KGNGYIGSKFPIAQSLVTYTKDTWTKEDIDLATEKAAKRIADFIFEQ"
     gene            1750..2610
                     /locus_tag="AC1PJC_002209"
     CDS             1750..2610
                     /locus_tag="AC1PJC_002209"
                     /inference="COORDINATES: protein motif:HMM:NF018184.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005488 - binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GyrI-like domain-containing protein"
                     /protein_id="HIP6621169.1"
                     /translation="MRINIVEKNEIKLYGIENQASVSSDFTSFWKNYYKYVVADYNAP
                     VGFITAPDEHGDFRYYTCIGHVPKNSDRFKEVILPSGNYAIIELTGSVEKTIPKAWKF
                     AKENFVIKNSPSLEVYSAGDRLSKKYRMDLWIPISDVLPNFKKNTSLIGNLKRKVSDS
                     IEDAIEFSKTDTGKIVLNIGGVILATGATLLLASLVDTDSSYEEISDSDSYDGYDSYH
                     NDENFDTENYSVSDVIDYEEFNSVGTHNYPDKRKPPIVHIAHRGETTYLRGGTDDDKQ
                     VFREENNLDF"
BASE COUNT          947 a          388 c          533 g          846 t
ORIGIN      
        1 cacaatgtga ccaattaatt gaagacatca atcagcatat ggaaaacttt gataaagatt
       61 cacaggataa ttacttcttt ggagcagtat tgattgccca agaatctggt gaggatcatg
      121 acgttacact tattgatggc caacaaagaa caactacctt tatgttgtta ttaaaagctt
      181 tgttgctcaa agttgagaat gaattagcta accaacccct gaatgatgca gatggtagac
      241 gtctgattaa gagattgaat ggactcaaag aacaaattgc ttcaatgctg tttaatatga
      301 ctgaggatga acttgatgac tttgtagatg ggctatcatt cccaactgtc gaaatgataa
      361 agtacattaa cgattccatc tcagaaaaat atgcttttga tatgcaggct attttattag
      421 gacgtaattt tgatgaaata aaacagaatg ttcaccaaat ataccgtcgc caaaaagaca
      481 atcgctatac gaacttctat aagaatttcc gatattttta caatacgtgt aatgaattga
      541 gtgttattaa ttgcattaat tttgctaatc atttcattaa aaactgccaa gtcattacca
      601 ttactagttt caacactgac caagcaatta atatttttaa ctctttaaat ggtactggtg
      661 taccattgac accaattgaa gtcattgttt ctaaaacaac tgctagtgca gcggatagaa
      721 aaacatttga aactaattgg caggagatag tagagagagc ggataagtca aatcttgatt
      781 tgaacacgct tatgactcat tatatcttca caaagctatc gcaacaaaat ggaaatgaga
      841 gaagaaatcc agggatacgt gcattcttca ataagaataa aagcctattg aatttcgata
      901 ctgtctttac gaatgacttg aaaaagatac ttcagactta cttgcttaca tcagaaactt
      961 cgattggcag agtagtcagt cagcttaatg gtaatttaaa gccgtttgtg agtagctatc
     1021 tatttttccg agatgataag agttatattg agtatctgat gagaattggg atcttaattg
     1081 aactgtctga gttatcttat agtcatagat tattcaaagg ctttttagaa gaaattaatt
     1141 tgatgtacag tcaagttgat gcattttcaa ctgagtcatt aatagataag gttagagagc
     1201 atattcgttt aaattttgaa tacgagaata ttaaacaaac ccttttagag agtggggttt
     1261 ccaatgccat tctgtatgtg aatgagtatc tttttgcatc agaaaatggt atagaactac
     1321 agctagacgg aaatatagat atagaacata tcatgcctca aagtgggatt aacagagacc
     1381 acattatgcg tgatattggt gtcaatgatc cggatgaatt ccgtgaatat gccgagaagt
     1441 tgggaaacaa gattttactt gaagcagaga taaaccgagg tattggagat gcctggttta
     1501 gaacgaagaa ggaaaatcac atcacaaaag gtaatggcta tattggtagc aagtttccaa
     1561 ttgctcagtc tcttgtgacc tatacaaaag atacctggac taaagaggat attgatctag
     1621 ctaccgagaa agcagcaaaa cgaatagcag actttatttt tgaacaataa ttttcagttc
     1681 gtgttatctg agatagggat aactagaact gaagcaatat agtgattttc tatagaaagt
     1741 aggggaatta tgagaattaa tattgttgag aaaaatgaga taaaattgta tggcattgaa
     1801 aatcaggcat cagtatcaag tgattttact tctttttgga aaaactatta taagtacgta
     1861 gttgccgatt ataacgcacc agttggattc attacggccc cagatgaaca tggtgacttt
     1921 agatactata cttgtattgg tcatgttcca aaaaactctg atagatttaa agaagtaatt
     1981 cttccaagtg gcaattatgc tatcatagaa ctaaccggtt ctgtcgaaaa aacaattcct
     2041 aaagcatgga agtttgctaa agaaaatttt gtaattaaaa atagtccaag tcttgaagta
     2101 tatagtgcag gggatagatt aagcaagaag taccgtatgg atctctggat tcctatttcg
     2161 gatgtattac cgaactttaa gaagaatacc agtttaattg gtaatttgaa aagaaaggtt
     2221 tctgattcga tagaagatgc tatcgaattt tcaaagactg atactgggaa aatagtcctg
     2281 aatattgggg gagtgattct tgctacgggt gcaaccttac tgttagcaag tttagttgat
     2341 actgattcaa gttatgaaga aattagtgac agtgatagtt atgacggata tgatagttat
     2401 cataatgatg aaaattttga tactgaaaat tattcagttt ctgatgtcat cgactacgaa
     2461 gagttcaact ctgtaggaac acataattat ccagataaac ggaaacctcc aattgttcat
     2521 atagctcatc gaggtgaaac aacgtatctt cgtggtggta cagatgatga taagcaggta
     2581 tttagagaag agaataactt agatttctaa agtattcagg aagttaagaa ttcagttttt
     2641 tggatattaa aaatgaaaaa tggagtcatc ttttgatgag ctcctatttt tctgctaaat
     2701 atgttgtagt tttc
//
LOCUS       DBNFCX010000169         2703 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.170, whole genome shotgun sequence.
ACCESSION   DBNFCX010000169 DBNFCX010000000
VERSION     DBNFCX010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2703)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2703)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2703
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.170"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..642)
                     /locus_tag="AC1PJC_002210"
     CDS             complement(<1..642)
                     /locus_tag="AC1PJC_002210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621170.1"
                     /translation="MRASGVNFDNPDLASSLLVASLYNGAGYFPLRKDNFLEKLPMFA
                     ASRYITYNRHWTQRANIMKSADGAERFNKAVSSNKIEQDLLKILLFTTLEAQNHMRSL
                     YGSDGRFYRNELSLDNSNGDTLATVNLAKLKQGSKETALFEQWNKVLTEAKKTENYNS
                     KLTYSVYQIIDELNTSEKDENDKTIYDYPELNGHLNTLKATLKEYYNSEIVPFL"
     gene            705..1625
                     /locus_tag="AC1PJC_002211"
     CDS             705..1625
                     /locus_tag="AC1PJC_002211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HIP6621171.1"
                     /translation="MKTSKLQQASLFDRIKQQKLLLLMLLPGLVLTFIFRYIPMYGVL
                     IAFKDYNPLKGVLGSEWIGFEEFTKFLSSPNFGTLLANTLKLSVYGLLLGFLPPIILA
                     IMLNQLLSDKAKKRIQLVLYAPNFISVVVIVGMIFLFFSVGGPVNSILGMFGIEANFL
                     TDPDFFRPLYILSGIWQGMGWASTLYTATLVNVDPALIEAAKLDGANIFQRIWHIDLP
                     ALKPVMVIQFILAAGGIMNVGYEKAFLMQTSLNLTSSEIISTYVYKIGLVSGDYSYST
                     AVGLFNALINIILLIAVNKIVKRINDGQGL"
     gene            1635..2522
                     /locus_tag="AC1PJC_002212"
     CDS             1635..2522
                     /locus_tag="AC1PJC_002212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HIP6621172.1"
                     /translation="MNTQMYTKFDKRMLIVNKILLAFLVLITVVPMVYILVASFMDPQ
                     ALVSKGISFDPKDWTVEGYQRVFSDKSILRGFFNSLFYSFSFAFVTVAISVMTAYPLS
                     KKDLVGKKWINAFLVFTMFFGGGLVPTYLLVKDLGMLNTVWAIIIPGAVNVWNIILAR
                     TYFQGLPDELVEAAVMDGANEFQIFWKIMIPLAKPIMFVLFLYAFVGQWNSYFDAMIY
                     IKDPDLEPLQLVLRKILIQSEPAKDMIGAQAAMNEMKRIAEMIKYATIVISSLPLIVM
                     YPFFQKYFDKGIMAGSLKG"
BASE COUNT          724 a          568 c          522 g          889 t
ORIGIN      
        1 taagaatggt acaatttcag agttataata ctcttttagt gttgctttca aagtatttaa
       61 gtgtccattt aattcaggat agtcatagat tgttttgtca ttttcatctt tttcagatgt
      121 gttaagctca tcaataatct gataaactga atacgttaat ttagaattat aattttccgt
      181 tttcttagct tccgttagga ctttgttcca ttgttcaaat aatgcagtct ctttagaacc
      241 ttgtttcaat tttgctaagt tgactgttgc taacgtatct ccattagagt tatccagtga
      301 caactcattg cggtagaatc gtccatcaga gccatataag cttctcatgt gattttgcgc
      361 ttcaagtgtt gtgaagagca gaattttcaa taagtcttgt tcaatcttgt tacttgatac
      421 agctttatta aaacgttcag caccatcagc agatttcata atattagcac gctgtgtcca
      481 gtgacgatta taagtaatgt agcgactggc ggcaaacatt gggagttttt ctaggaaatt
      541 gtcttttctt aatgggaaat accctgcacc attatataga ctagcaacta gtagagaaga
      601 tgccaagtca ggattgtcaa aattcactcc agaagctcgc aaatagccaa ttagatcctc
      661 tttctaaaat caataaattt gaaacgtttc aaaaaggagt tcttatgaaa acatcaaaac
      721 tgcaacaagc tagtctattc gatagaatca agcaacagaa actcttgtta ctgatgttac
      781 taccaggttt ggtcttgact ttcatcttcc gttacattcc tatgtacgga gtgttgattg
      841 cctttaaaga ctataatcct ttaaaagggg tgcttggtag tgagtggatt gggtttgaag
      901 agtttaccaa gtttctctct tctccaaatt tcggcacttt acttgccaac accttgaaat
      961 tgagtgtcta cggtctgctc ttaggatttc ttccaccgat tattttggcc atcatgctca
     1021 atcaactatt gagcgataag gctaaaaaac ggattcagtt ggtgctctac gctccaaact
     1081 ttatctcagt cgtggtcatc gtcggtatga ttttcctctt cttctcagta ggaggaccgg
     1141 ttaactccat cctaggtatg tttggtattg aagccaactt cctgacagac cctgatttct
     1201 tcaggcccct ctacatcctc agtggtattt ggcagggaat gggctgggca tcgactctct
     1261 acacggctac cttggtcaat gtcgatccgg ccctgattga agcggcgaag ctagacggtg
     1321 ccaatatctt ccaacgaatc tggcacattg acttgcctgc actaaaacca gttatggtca
     1381 ttcagtttat cttagcagct gggggcatca tgaacgttgg ctatgaaaaa gccttcctga
     1441 tgcagacttc tctcaacctg accagttctg aaatcatttc aacctatgtc tataaaatcg
     1501 gtttggtgtc aggggactac tcttattcaa cagcggttgg cttatttaac gcacttatca
     1561 atattattct gctgattgca gtcaataaga ttgtcaaacg catcaatgat ggacaaggct
     1621 tataggaggt tcgtatgaat acacaaatgt acacaaaatt tgacaagcga atgctgattg
     1681 tcaataaaat cttgctggca tttcttgttc tcataacagt tgtgcctatg gtctatatcc
     1741 tagtcgcatc cttcatggat ccgcaggcct tggtcagcaa gggaattagc tttgatccaa
     1801 aggactggac agtagaaggt tatcaacggg tattttcaga caagtctatc ctacgcggat
     1861 ttttcaactc cctcttttat tccttctcct ttgccttcgt gaccgtggct atctcagtca
     1921 tgactgccta cccgctctct aaaaaagatt tggttggaaa aaaatggatc aacgccttcc
     1981 tagtcttcac catgttcttc ggtggtggac ttgttccgac ctatctcttg gttaaagatt
     2041 tgggaatgtt gaacactgtc tgggccatta ttatccctgg tgcagtcaat gtttggaata
     2101 ttatcttggc acggacctat ttccaaggct tgccagatga gttggtagaa gcagccgtta
     2161 tggacggtgc caatgagttt cagattttct ggaaaatcat gattccacta gctaagccaa
     2221 tcatgtttgt cctcttcctc tatgcctttg tcggtcaatg gaattcttac tttgatgcca
     2281 tgatttacat caaggatcca gacttggagc cactccaact agtacttcgt aaaatcctca
     2341 ttcaaagcga gcctgctaag gacatgattg gtgctcaggc tgctatgaat gaaatgaaac
     2401 gaatcgcaga aatgattaag tatgcgacca ttgtcatctc tagcttgcca ctcattgtca
     2461 tgtatccatt cttccagaaa tactttgata agggtattat ggctggttca ttaaaaggtt
     2521 aataaatatc tttcattttc tcttttctta cgtcgacgaa agaggaaact tcgtttcctt
     2581 atctccagct tcaaataatc aggtattatt tgaactcgct atgccgtact tcagtacagc
     2641 cttcagcttt ttgataggaa cgtagttccc tctattcccc acctcaaaag gttcacaaaa
     2701 cct
//
LOCUS       DBNFCX010000170         2696 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.171, whole genome shotgun sequence.
ACCESSION   DBNFCX010000170 DBNFCX010000000
VERSION     DBNFCX010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2696)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2696)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2696
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.171"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(31..663)
                     /locus_tag="AC1PJC_002213"
     CDS             complement(31..663)
                     /locus_tag="AC1PJC_002213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009730165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative bacteriocin export ABC transporter"
                     /protein_id="HIP6621173.1"
                     /translation="MIEIRNLQKQFSNRMILEKINLTFEDGKIYALIGKSGSGKSTLL
                     NIIAKLIPYEDGVVEYGGKDIKKINEHIFYRDYLGYLFQHFGLIENESIGQNLELGFI
                     GQKLSKKDKLVRKLEVLEKVNLSHLTLDQKIYELSGGEAQRVALAKIFLKNPPLILAD
                     EPTASLDPVNSQEVIELLTSLKTEDKIIIIATHNPAVWEKADVVVRMEDL"
     gene            complement(665..>2696)
                     /locus_tag="AC1PJC_002214"
     CDS             complement(665..>2696)
                     /locus_tag="AC1PJC_002214"
                     /inference="COORDINATES: protein motif:HMM:TIGR01654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1430 domain-containing protein"
                     /protein_id="HIP6621174.1"
                     /translation="RCKMRKWFVFLSTLLLTGFMIVNIQNENQQLQFLSYEAVDLIGT
                     EEAVKVANREEFTTSLSNLAIRTNSVIARRIVEPQKSGKVKFVYDCYGKGKLPSDLEQ
                     ASIESAQASDLVNSYIITSGNLTGEELSQTLKKLGYRTVIMSAYSLPYLLYSLLFSEQ
                     FRINMSLCFLTFICLTLIYRIKDLRSAGIRRVAGKSYLEILFSPIVDDILFFIGVYAV
                     NLLLGSLTLLILNLFQSLTFSLLLAGLFLYLLSLLIFSVFLTFIYMVGLKATSMIEVL
                     KGKLPLKRLLALMLLGQLASILVVGWTVNRTLIHFNELQMVEKGVEGWDKNKDYYQAS
                     YSYGAAFNGEMSKEEQNSRWYQFAKVAIQNHGALFVKNNLNRYLQGDESDGINKFDYA
                     PSGHTIFVTPNYLELQNIQVSEEFKSKMSSLQQGEFGLIIPDKLKGQEETLVQLYVDY
                     LNSFGRENLDIESSQLFEFQTYTSYVGSHQSRFLYNTVSYILEQHLIDPIIVVLTPES
                     TGDTPASQILWGTSLQSLFLVDYQQSIQLLKEQGVYQWVSYLLNSKATYYENLNSIRK
                     QFLFLLLGALIGIATSILLFNTMNLVYFEQFRREIFIRRLAGMTFIELHFTYLITQLL
                     VLGVGMLGLLFVTNELGLSAGTGAIFLSNLFLILFLQERKESKIAYTVLQGG"
BASE COUNT          867 a          557 c          435 g          837 t
ORIGIN      
        1 tttcaattct tacttaatac taaattccat ttacaagtct tccatgcgaa caactacatc
       61 tgctttttcc caaacagcag gattatgtgt agcgataata atgattttat cctctgtttt
      121 aagtgaggtc aagagttcta taacttcttg agaattgaca ggatctaagg aagccgtcgg
      181 ttcgtctgcc aagattaaag gaggattttt tagaaaaatt ttcgccaagg caactcgttg
      241 agcttcgcca cctgacagtt catatatttt ctgatctagg gttagatgtg agaggtttac
      301 cttctctaaa acttccaatt tgcgaactag cttatccttt ttggatagct tttgtccaat
      361 aaatcctaat tctaaattct ggccaattga ttcattttca attagaccaa aatgttgaaa
      421 taaataacct aagtaatcac gataaaaaat atgctcgttg atctttttga tatcttttcc
      481 accatattca accactccat cctcgtaagg gattagcttg gcaatgatat tcaacagtgt
      541 cgactttcca ctcccacttt tgccaataag agcgtaaatt tttccgtcct caaaggtcaa
      601 gttgattttc tccaatatca ttctattgga aaattgcttc tgtaaatttc taatttcaat
      661 catactatcc tccttgtaag actgtatagg ctatcttact ttcttttctt tcttgtagaa
      721 acaaaatcag gaataaattg ctgaggaaaa ttgctccggt ccctgcactc aatcccagct
      781 cattcgttac gaaaagtaaa cccagcattc ctaccccaag cactaagagt tgggtaatta
      841 gataggtaaa atgaagttct atgaatgtca taccagctag acgacggata aaaatttctc
      901 tacgaaattg ttcaaaataa accaaattca tcgtattaaa taacagtatg gaggtagcaa
      961 tgccaatcag ggctcccaac aaaagaaaca gaaactgctt ccgaatactg ttcaagtttt
     1021 catagtaagt agctttacta tttagcaggt aggagaccca ctgatagact ccctgttctt
     1081 tcagtagctg gatactctgc tgataatcta ccaagaaaag ggattgaagg gaagttcccc
     1141 acagtatttg cgatgccgga gtatctcctg ttgattccgg tgtcaaaact acaataatcg
     1201 gatctatcag atgttgttct aatatatagg atactgtatt gtagagaaat ctactctgat
     1261 gacttcccac atagcttgta taagtttgaa attcaaataa ttgtgaactc tctatatcaa
     1321 gattctcacg accaaatgaa ttcaagtagt ctacataaag ttgaaccagt gtttcttctt
     1381 gtcctttcaa tttatcagga ataatcaacc caaactcccc ttgttgtaag gaggacattt
     1441 tactcttaaa ttcttctgaa acctgtatat tctgaagttc taaatagttg ggagtaacaa
     1501 agattgtatg accagaagga gcgtaatcaa atttgttgat tccatccgat tcatcccctt
     1561 gtaaatatct gttcaaatta ttcttaacaa ataaggcacc gtggttttgt atagccacct
     1621 tagcaaactg ataccaacga ctattttgct cttctttgct catttctcca ttaaaagcag
     1681 caccatagct gtaagaagct tggtagtagt ccttattctt atcccatcct tccacacctt
     1741 tctccaccat ctgtaattca ttaaagtgta tgagtgttcg attcaccgtc cagccaacaa
     1801 ctaaaatcga agctaattga cctaacaaca tgagagccag caagcgtttt aacggaagtt
     1861 tcccttttaa aacttcaatc atagaagttg ctttcaaacc caccatatat ataaacgtta
     1921 gaaagacaga gaaaatcagt aaactcaaca agtagagaaa aagtcctgcc agcaagagac
     1981 tgaaggtcaa actctgaaat aagtttaaaa tgagaagtgt gagactacct agtaaaaggt
     2041 taactgcata aacccctata aagaagagaa tatcatccac tataggggag aataaaattt
     2101 ctaaataaga tttcccagct acccgcctta tgcctgcact tctcaaatcc ttgatacggt
     2161 aaattaatgt taaacaaata aacgtcaaga aacagagaga catgtttata cgaaactgtt
     2221 cactaaatag gagagagtaa agcaaatagg gcagagagta cgccgacata attacagttc
     2281 tataacccaa cttcttcaac gtttgtgaaa gttcttcccc tgttagatta ccagaagtga
     2341 tgatatagct attgaccaaa tcgctagctt gggcactctc aatagaagcc tgttccaaat
     2401 ctgagggtaa ttttcctttc ccatagcagt catagacaaa cttaactttc ccactttttt
     2461 gaggctcgac aatccttcgg gcaatgacac tgtttgtgcg gatagctaaa ttacttaagg
     2521 aagttgtaaa ttcctctcga ttcgccactt taaccgcttc ttctgtccca attaaatcta
     2581 ccgcttcata actgagaaat tgaagctgtt gattttcatt ttgaatattt acaatcataa
     2641 atcccgttaa cagtagtgtt gacaaaaata cgaaccactt tctcatctta cacctc
//
LOCUS       DBNFCX010000171         2682 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.172, whole genome shotgun sequence.
ACCESSION   DBNFCX010000171 DBNFCX010000000
VERSION     DBNFCX010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2682)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2682)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2682
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.172"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            412..2601
                     /locus_tag="AC1PJC_002215"
     CDS             412..2601
                     /locus_tag="AC1PJC_002215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910563.1"
                     /note="The YSIRK form of extended signal peptide directs
                     nascent proteins to the cross-wall site, while signal
                     peptides lacking YSIRK direct proteins instead to the cell
                     pole. A large fraction of YSIRK proteins are surface
                     proteins anchored by sortase-mediated processing of a
                     C-terminal LPXTG motif; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK-type signal peptide-containing protein"
                     /protein_id="HIP6621175.1"
                     /translation="MNRQTEIFSLRKSKVGLASVMIALMWFGTGIGAVVKADETAIPS
                     IEIEAKVTETPLAIEEELVEDSDRKTEKEEAAEVEVKPMDASLPDSEKKAKESILKID
                     PVHAGDKQISGQTIPGGYVFISVDGEAITSIDNSLEADEEGKFKHSLEKPLGYNQVVE
                     ISSFPKESEEESEGEGEELIETVKTERHPDAYTIPTERLEKTEDGQHQVLVEPILEHA
                     NKVIGHTSVKGFVYLSINGSFVSDKTPINEDGRFEVTFSDSLAGSKFKANDKLVLSFI
                     SEDNRPVITNHIVIPWEKTDSSSQVMVKPFSSEDSVLEGQTVPFGQVQLYNVATFEFL
                     EEAIADKTGNFKVTLPKLQPGEQYYRLVYNQQGEVESIYIDTVDGPSKQLDKAVIAPL
                     VTYLQEVDMDEATFENPIVVPTLHNKKDYIVGRTLFPHAYVRMVSSIEGKVYPPVQVD
                     ELGFFGFQIQDLQLPFEKGEKIRFEILDPKTNILLASKEVVVGQYLEDEDESDLPFQV
                     DEVTTDHGYISGKIVPGVIVELVSTHKAEEMLARTTADATGQFVFDLGNRVLKEGETL
                     SFRAFDQDGNQMAWEVVTVQKGKGKRISKPAPLIRKNDAITDEVKTNDMKKPNSSQSP
                     SMSLSRENQQMGQQMDVVQEKVSLESKGHQEKMVTKKEKVAPSKKSEAKEEDKQIKEA
                     LHAVVKQSQSVSLPKTGEKNGMLLAILGAVSLFFTVLIMSILKKRND"
BASE COUNT          866 a          436 c          644 g          736 t
ORIGIN      
        1 atccccagac tgtttcactc ccacccccgc atagctccaa cagtcagagt agtgactgtt
       61 ggaggttgga aatgaagcga actctgttcg catcagtcgt ataggccaga tttggagtgc
      121 aaaacacgaa ttgctgagat ttgcttcgca aatcctatct ccaaccttta acagtccact
      181 ggactgttaa acccaatcaa ccactgcgct gagatgttga cacgaacact gagtagtggt
      241 cctgggcttt ttgcccagcc cagtttcgtt ttgaggcata ttcttaggag tgagcatggg
      301 cagattagat aaaaaacaaa cgaaacataa tactatgtga gattggtttt ctataattag
      361 agtaggcact gtgtgtgttg agtattaaat gatagaaaac aaggagaaaa aatgaataga
      421 cagactgaaa ttttttcgtt gagaaagagt aaggttggat tagcttctgt tatgattgcg
      481 cttatgtggt ttggaacagg tattggagca gttgtaaaag ctgatgaaac agctattccg
      541 agtatagaaa tcgaagccaa ggtaacagaa acgccacttg ctattgagga agagctggta
      601 gaagattcgg atagaaaaac agaaaaggaa gaagctgctg aggtagaagt gaaaccgatg
      661 gatgctagtc ttcctgacag cgagaaaaag gctaaagaaa gcatcttgaa aatcgatcct
      721 gttcatgctg gtgacaagca aatttcaggt cagactattc ctggaggata tgtatttatt
      781 tctgtggacg gtgaagcgat tacttccatt gataatagtc tagaagcgga tgaagaaggt
      841 aagtttaaac attctttaga gaagccattg ggctataacc aagtggttga aattagttca
      901 tttccgaaag aatctgaaga agagtctgag ggcgaaggtg aagaactgat tgagactgtc
      961 aaaactgagc gtcatccaga tgcctataca attccgactg aacgactaga gaagacagaa
     1021 gatgggcagc accaagttct ggtggaacca attttagaac atgctaataa ggttattggg
     1081 catacctctg ttaagggatt tgtttatctg tctataaatg gaagttttgt atcggataag
     1141 acgccaatca atgaagatgg tcgatttgag gtgacctttt ctgacagttt agcaggttcg
     1201 aaatttaagg cgaatgacaa actggtttta tcatttattt ctgaggataa tcgtccagtt
     1261 attacaaatc atattgttat tccgtgggaa aaaacagata gctcttcaca ggtaatggtg
     1321 aagccatttt caagtgagga ttccgttttg gaggggcaga cggttccgtt tggtcaagta
     1381 caattatata atgttgctac ttttgaattt ttggaagaag caattgctga taagacaggg
     1441 aactttaaag ttaccttgcc gaaattgcaa ccaggagagc aatattaccg cttggtgtac
     1501 aatcagcaag gagaagttga atcgatttat attgacacgg tagatggtcc aagtaaacaa
     1561 ttagataagg ctgttattgc ccccttggtg acatatttac aagaggtaga tatggatgag
     1621 gcaacctttg aaaatccgat tgttgtccct actttgcaca ataagaaaga ctatatcgtt
     1681 ggtagaaccc tgtttccaca tgcctatgtt cggatggttt catcaattga aggtaaggta
     1741 tacccgcctg tccaagttga tgaattaggt tttttcggtt ttcaaattca agatttgcaa
     1801 ctcccctttg aaaaaggaga gaaaattcgt tttgagattt tagatccaaa gacaaatatt
     1861 ttgttggctt caaaagaggt agtcgtcggt caatatttag aagatgagga tgagagtgac
     1921 ttgccattcc aagtggacga agtgacaact gatcacggct atattagtgg aaaaattgtc
     1981 ccaggagtga tagtagaact ggtatcgaca cataaggctg aagaaatgct tgctcggaca
     2041 accgctgatg ccacaggcca gtttgtattt gatttaggaa atcgagtatt aaaagaggga
     2101 gaaactctgt cgttcagggc ttttgaccaa gatgggaatc agatggcctg ggaggttgtg
     2161 acagtacaaa aaggaaaagg gaagcggatt agtaaaccag cgcccctcat cagaaaaaat
     2221 gatgccatca cagatgaagt caagacaaat gatatgaaga aaccaaattc ttctcagtcc
     2281 ccatcaatga gtttgtcacg agagaatcag cagatgggac agcaaatgga tgttgttcag
     2341 gagaaggtga gcttggagtc gaaggggcat caagaaaaaa tggtgaccaa gaaagagaag
     2401 gtagctccat caaaaaaatc tgaagccaag gaagaagaca agcaaataaa agaggcttta
     2461 catgctgttg ttaagcaaag ccagagtgtt tccctcccaa aaacaggtga gaaaaacggg
     2521 atgcttttag ctattctggg agctgtcagc ttattcttta cagttttgat tatgagcatc
     2581 ttaaagaagc gtaatgattg aattcgatta tcgaataggt attaaaatcg agttcgtctt
     2641 attggtattt ttaggctatt ttttatctat tttttgaaaa aa
//
LOCUS       DBNFCX010000172         2612 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.173, whole genome shotgun sequence.
ACCESSION   DBNFCX010000172 DBNFCX010000000
VERSION     DBNFCX010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2612)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2612)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2612
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.173"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(64..1089)
                     /locus_tag="AC1PJC_002216"
     CDS             complement(64..1089)
                     /locus_tag="AC1PJC_002216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HIP6621176.1"
                     /translation="MEEQRSITMKDVARVAGVSVGTVSRVINNEPGIKESTLEKVNAA
                     IQELNYIPDVYARGMKKNKTETIALIIPTVWHPFFGEFAYHVEVELSKKNYKLLLCNI
                     SGPKRELDYLTMLQQNKVDGIIAITYSPIDDYLSSNIPFVSIDRVYENKDIACVSSDN
                     RAGAELAADTLIAKGGRHFAFIGGHNKTINETKKRRLYFEKRILEAGFPCHVLDLEEP
                     YDDFVGQVEEFLINNPQVDAIFTINDFVALDTLSILEKLGRRVPEDVQIIGYDGIQLA
                     SERSLELSTIRQPLEAMAQEAVACLVDIIEKRERPLQVTLPISYLEGKTTKNFGNYIP
                     VYTNHKI"
     gene            complement(1246..1791)
                     /locus_tag="AC1PJC_002217"
     CDS             complement(1246..1791)
                     /locus_tag="AC1PJC_002217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621177.1"
                     /translation="MSLQNRVEEMYKDHEVKPYISPERDLAAWLLEAKPVPKRNMVRL
                     EEGILPGDIILLWRISLGSFETTTPYSKYFEYMYGINGPAHMEQLIADGYAYVESAFD
                     SLDHITSTAKKNILKAEGVTGLSKMKAADLDTALKDNLTEEKLAPYFTVRGYALTEKG
                     RAALENHPEVLAKHPMKKMYK"
     gene            complement(1792..2169)
                     /locus_tag="AC1PJC_002218"
     CDS             complement(1792..2169)
                     /locus_tag="AC1PJC_002218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000625774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxalase/bleomycin resistance/extradiol
                     dioxygenase family protein"
                     /protein_id="HIP6621178.1"
                     /translation="MIQSIGQVMLYVNDIEASAQFWKEKMGFERVEKQVQGPQTSYII
                     APKSDSEVQFVLHDKAEVAEMEPELNLGTPSILMTSVDVAKTYEELVERGVTTNPVMD
                     LGFMKVISFADNDGNYYAIREVK"
     gene            complement(2254..>2612)
                     /locus_tag="AC1PJC_002219"
     CDS             complement(2254..>2612)
                     /locus_tag="AC1PJC_002219"
                     /inference="COORDINATES: protein motif:HMM:NF022158.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2500 domain-containing protein"
                     /protein_id="HIP6621179.1"
                     /translation="MMFENLFDPDGSLVWHTALFYSFSAIILATVCFHIIKNFMEWHH
                     NNRAPKESCKAKLVSKRTHVFGNEVARTNYYVTFEWEGKRQEFRLRSDEYALLAEGDI
                     GTLHFQGTRFLGFERL"
BASE COUNT          738 a          572 c          500 g          802 t
ORIGIN      
        1 tgaagtgata aataaaagac gatttccaaa aggaagtcgc cttttttgac aatcacacaa
       61 atactatatc ttgtggttgg tgtaaactgg tatatagttc ccaaaatttt ttgtagtttt
      121 tccttcaaga taggaaatcg gcagagtgac ttgtaggggg cgctcccttt tctcaataat
      181 gtcgactaaa caggcaactg cttcttgggc catagcctcc aatggctgac gaatggtgga
      241 aagttctaga gagcgttcac ttgctaactg aataccgtca tagccaatga tctggacatc
      301 ttctggaacc cgtcgtccca gtttttccaa aatagaaagg gtgtctaaag ctacgaaatc
      361 attgatggtg aaaatggcgt caacctgtgg attgttaatc agaaactctt cgacttgacc
      421 aacaaagtca tcatatggct cttccaagtc caagacatga caaggaaaac ctgcctctaa
      481 aatccgcttt tcaaaataca atctacgctt cttggtttca ttgattgttt tattgtgccc
      541 accgataaag gcaaaatgac gaccaccttt tgcaatcaag gtgtccgctg ccagttccgc
      601 accagctcgg ttgtccgaac tgacacaggc tatgtccttg ttttcataaa cgcgatcgat
      661 actgacaaag gggatattgg acgatagata atcgtcaatc gggctataag tgatagcaat
      721 aatgccgtcc accttattct gttgcagcat agtcagataa tccaattccc tttttggacc
      781 agaaatattg caaaggagca acttgtaatt tttcttactc agttccactt caacatgata
      841 ggcaaattct ccaaaaaaag gatgccaaac tgtcggaata atcaaggcga tggtttcggt
      901 tttgttcttc ttcatgccac gagcataaac atctggaatg taatttaatt cctgaatggc
      961 agcattgact ttttcaagcg tactttcctt aatacctggc tcattgttga taactcttga
     1021 tacagtccca acactgaccc ctgcaactcg agctacatct ttcatagtaa ttgatctttg
     1081 ttcttccatg gtttacccct ttcttttgaa acgtttcaat aatttacatt agaatatcat
     1141 tgatagcgtt ttctgtcaag aaaaattgac ttgttagcaa ataaaaacac ccaaaaagct
     1201 agaataattc taacttttgg gtgccgttca aaaatctttt ctattttatt tgtacatctt
     1261 cttcattggg tgttttgcaa gcacttctgg gtgattctcg agagcagctc tgcctttttc
     1321 cgtcaaggca taacctcgga cagtaaaata tggagctaac ttttcttccg tcaagttgtc
     1381 cttgagggca gtgtcgaggt ctgccgcctt catcttggat aggcctgtca caccctctgc
     1441 tttgaggata tttttcttgg cagtcgaagt gatgtggtct agggaatcaa aggccgattc
     1501 cacataggca taaccgtctg cgatcaactg ctccatgtga gcaggaccat tgataccata
     1561 catgtactca aagtacttgg agtagggcgt cgtcgtttca aaagaaccca ggctaatccg
     1621 ccataataaa ataatatctc ctggcaaaat tccttcttcc agacgaacca tattgcgttt
     1681 gggaacgggt ttggcctcca aaagccaggc tgccaagtca cgttcggggg aaatataggg
     1741 tttgacctcg tggtctttat acatttcttc aacacgattc tggagtgaca tttactttac
     1801 ctcacgaatt gcgtaataat ttccatcatt gtctgcaaag ctaattacct tcatgaaacc
     1861 aaggtccatg actggattcg ttgtgacacc acgttcaaca agttcttcgt aagttttggc
     1921 tacatctact gatgtcatta agattgatgg tgtacctaag tttaattctg gctccatttc
     1981 agcaacctcc gccttatcat gaagtacaaa ttgtacctca ctatctgatt taggtgcaat
     2041 aatgtaagaa gtttgggggc cttgcacttg tttttctaca cgttcaaatc ccattttctc
     2101 tttccaaaat tgagctgaag cctcaatatc attcacatat aacataactt gtccgattga
     2161 ttgaatcatc ttaaatacct cttttgcgtt gtacgaacat gtgttcaaac cattatacac
     2221 tagataggga tattctccaa agaaaaacga ctcttagagc cgttcaaaac ctaggaaacg
     2281 agtcccctga aaatgcaggg tgcctatatc tccctctgct aaaagggcgt attcatctga
     2341 acgaaggcga aattcctgcc gttttccctc ccattcaaac gttacataat aattggttcg
     2401 tgctacttcg ttaccaaaaa catgggttcg tttagagaca agcttagcct tgcaagattc
     2461 tttgggtgcc cgattgttgt ggtgccattc cataaaattt ttaatgatat ggaaacaaac
     2521 tgtcgctaat atgattgcgg aaaaactgta gaaaagggcc gtatgccata ctaggcttcc
     2581 atctgggtca aacaagttct caaacatcat ta
//
LOCUS       DBNFCX010000173         2446 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.174, whole genome shotgun sequence.
ACCESSION   DBNFCX010000173 DBNFCX010000000
VERSION     DBNFCX010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2446)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2446)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2446
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.174"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(31..333)
                     /locus_tag="AC1PJC_002220"
     CDS             complement(31..333)
                     /locus_tag="AC1PJC_002220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621180.1"
                     /translation="MTSNYRTETDIKSSLGEPIYTRLDALINFSELSEVVSQKIFENK
                     LSNKLATLTESDKNIINSSSDFKNFKSKGKNFKNVRSVDKYIDDYIFYQIVKQKFL"
     gene            346..1563
                     /locus_tag="AC1PJC_002221"
                     /pseudo
     CDS             346..1563
                     /locus_tag="AC1PJC_002221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647386.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009037 - tyrosine-based site-specific
                     recombinase activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
     gene            complement(1863..>2446)
                     /locus_tag="AC1PJC_002222"
     CDS             complement(1863..>2446)
                     /locus_tag="AC1PJC_002222"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621181.1"
                     /translation="VITVFQSEHKSVYKKIEVLVETYPELKNKDYYLTITGIFWRNNQ
                     IHNQKKKLEPSLKANLRKFTDSYYEKNSGLIIEDLISHFNTFEVPSFKEVLSIMAAVR
                     NFAETIDAFFMKKVDNDKYIEYNLMTLYDEGKIKNLDNGHFNWSLFFETHLAVKDSIF
                     RQAKICSELSKVKNYEELKEIINSIRHKYEKEK"
BASE COUNT          860 a          423 c          362 g          801 t
ORIGIN      
        1 attgaaaaag tttcagattt ataatagtat ttaaagaaat ttttgcttaa caatctgata
       61 aaaaatatag tcatcaatat atttatctac agatctaaca tttttaaagt tttttccttt
      121 acttttaaag tttttaaaat cacttgatga atttataatg tttttatcac tttctgtcaa
      181 ggttgctaat ttattggata atttattttc aaaaatcttt tgagatacta cttcggataa
      241 ttctgaaaag ttaattagag catctaacct agtataaatt ggctcaccta gactactttt
      301 tatatctgtc tccgttctat aatttgaagt caaaaatata atatcatgac tatcacaaaa
      361 acaaaaaata gaacatatcg cttaaaagta tatatcccaa ttgttgcacg aatgccactc
      421 ggaatcgtga acaataaata ctttgataag cgtttcaaaa gcaagaagga ggcacgacaa
      481 gcagagatag accttttaac aaaaatcagt cagattgaga acaacgagtt tacagggcta
      541 ggcaaggaag aaattctatt caaagatttt tacgaaaatg tctggtggga gtattataaa
      601 gcaggacaga ccacttcaac tacaaagccc ccaagcagat caactatagc caatacaaaa
      661 acttgtttca gaaaacatat tttacctatg ttaggtaatt acactattca atttcgcaat
      721 cataacaagc aagttattct aaacttgatg actgctaaag ctaatgaata cgccaatttc
      781 aagaccttga gaagctatgt aatttccata tttgattgag cagaggaatt agaatatata
      841 gaatcaaata aagttaccaa aatattgcgg cgtatcaaag caaccaagaa aatccaatta
      901 gcggaaacaa agagagatga agacctctac cttacacagg agcaactaca agagtggttc
      961 tcggctttcc aagatgactt ggctatcgga aaaatttcgc ttaaagacta tgttctattt
     1021 tatcttacct tctttttggg agaccaaaaa tccgagagct acgctttgca atggaaacac
     1081 atcaacatta aaaaacagga aattcaatta gttcaagcct tggataaata caagaatcct
     1141 aaatctacta agggaaataa gaaaacaaca tttcgaattc ctaatgaact tactgacctt
     1201 ctccaatctt gaaaaaaaca acagaaagcc gaactagcca aattcagcat tatccaatct
     1261 gatgaacaat atgtatttac ctatatcgac atgaaaggca atgtgaatag ccccttacac
     1321 gctgattatc tcaataacaa gatgaagtca gtcaaacgcc gtcacaagga gctaaaacac
     1381 gccacaccac acaaactaag acatactggt gcaacacttg ctaaacaagc aggtatgagc
     1441 ttagaagcta tttctgaagc tctaacacac agtgacacta ttacaacgaa gacttatgtc
     1501 aatacttcaa atgtcattcc aatggctgtt ggcgaaattg cctaccgaaa cctcaaaaaa
     1561 taatggtggg aatttggtgg caattttggt ggcaattctt tgaaaaaagc actaaaaaac
     1621 accccatggt gtgaaccatg aagtgttgta aatgctgtat tgtagctggt tcttaacgtt
     1681 tagagaactg gctagcttta cgtgctttct taagacctgg tttgttaggg tttaatttta
     1741 catttcttga aaaagcttta acactagcct ttaacggctt tttattttgc ttaaaatttg
     1801 attacatttc atctaacttg aaacaagtca ggtaattttt tcaaaaataa tatgtgttgg
     1861 ttctattttt ccttttcata tttatgtcta attgagttta ttatctcttt cagttcttca
     1921 taatttttta ctttagataa ttcactacaa attttggctt gtctgaatat actatctttt
     1981 acagcaaggt gtgtttcaaa aaaaaggctc caattgaaat gtccattatc taaattcttt
     2041 atttttccct cgtcatataa agtcattaaa ttatactcaa tgtatttatc attatctacc
     2101 ttcttcataa aaaaagcatc tatagtttca gcaaaattcc gtacagcagc cataattgat
     2161 aacacttcct taaacgatgg aacctcaaat gtattgaagt gtgagattaa atcctcaatt
     2221 atcagcccag agtttttttc atagtaacta tctgtaaatt ttcgtaagtt tgcttttaag
     2281 cttggctcta actttttctt ttgattatga atttggttgt tcctccaaaa tattccagta
     2341 attgtaagat agtaatcttt attttttagt tctgggtaag tttcaactaa tacctcaatt
     2401 tttttataga cagatttatg ctctgattga aagacagtaa tcactt
//
LOCUS       DBNFCX010000174         2436 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.175, whole genome shotgun sequence.
ACCESSION   DBNFCX010000174 DBNFCX010000000
VERSION     DBNFCX010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2436)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2436)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2436
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.175"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(42..1046)
                     /gene="ccpA"
                     /locus_tag="AC1PJC_002223"
     CDS             complement(42..1046)
                     /gene="ccpA"
                     /locus_tag="AC1PJC_002223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001228 - DNA-binding transcription
                     activator activity, RNA polymerase II-specific [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="catabolite control protein A"
                     /protein_id="HIP6621182.1"
                     /translation="MLNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLE
                     VIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFATLAKGIDDIADMYKYNIVLAN
                     SDENDEKEINVVNTLFSKQVDGIIFMGYHLTDKIRAEFSRSRTPIVLAGTVDLEHQLP
                     SVNIDYAAASVDAVNLLAKNNKKIAFVSGPLVDDINGKVRFAGYKQGLKDNGIEFNEG
                     LVFESKYKYEEGYALAERILNAGATAAYVAEDEIAAGLLNGVSDMGVKVPEDFEIITS
                     DDSLVTKFTRPNLTSINQPLYDIGAIAMRMLTKIMHKEELENREVVLNHGIKVRKSTK
                     "
     gene            1256..2341
                     /locus_tag="AC1PJC_002224"
     CDS             1256..2341
                     /locus_tag="AC1PJC_002224"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000040814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HIP6621183.1"
                     /translation="MSKLHHVKSYLEANKMDLAIFSDPVSIYYLTGYHSDPHERHMML
                     FVMPDHDSLLFLPALDVERAVATVDFPVAGYMDSENPWQIIKSKLPQKSFSAIGAEFD
                     NLNLTRYHGLQSIFSQPFSDITPLINTMKLIKSRDEIEKMLVAGEFADKAMQVGFNNI
                     SLDVTETDIIAQIEFEMKKQGISKMSFDTMVLTGDNAANPHGIPSTNKIENNALLLFD
                     LGVETLGYTSDMTRTVAVGKPDQFKKDIYNLTLEAHMAAVNMIKPGVTAGEIDYAARS
                     VIEKAGYGEYFNHRLGHGLGMSVHEFPSIMEGNDLVIEEGMCFSVEPGIYIPGKVGVR
                     IEDCGYVTKNGFEVFTKTPKELLYFEG"
BASE COUNT          684 a          531 c          457 g          764 t
ORIGIN      
        1 aaaaatagca ctcacaatag atggagtgct attttcattt atcacttagt tgatttccgt
       61 actttgattc cgtggttaag aactacctca cggttttcca actcttcctt gtgcatgatt
      121 ttggtaagca tgcgcatagc aattgcacca atatcgtata gtggctgatt gatagaggtc
      181 aggtttggac gggtaaactt ggtcactagg gaatcatcac ttgtaatgat ttcaaagtct
      241 tctggaacct tgacgcccat atcactgaca ccattcaata gaccagcagc aatctcatct
      301 tctgcaacat aagctgcagt tgctccagca ttcaaaatac gttctgctag agcgtagcct
      361 tcctcgtatt tatacttgga ttcaaaaacc aatccttcgt taaactcgat tccgttgtcc
      421 ttcaagcctt gtttgtagcc tgcaaaacga actttaccgt tgatgtcatc tacaagcggc
      481 cctgatacaa aggcaatttt cttattgttc ttagctaata gattgactgc atcaacacta
      541 gcggcagcat agtcaatatt gacactaggt aattggtgct ccaagtccac ggtaccagct
      601 aaaacaatcg gtgtacgtga gcgtgaaaac tccgcacgaa tcttgtctgt caaatgatag
      661 cccatgaaaa tgattccgtc cacctgtttt gagaacaggg tatttaccac attgatttct
      721 ttctcatcat tttcatcact gtttgctagg acgatattgt atttgtacat atcggcaata
      781 tcatcgatac ctttggccaa ggttgcaaaa taagcattag caatatttgg aatcacaacc
      841 cccacagtgg tagtcttctt gctggccaag ccacgtgcaa cagcattcgg acgataatcc
      901 aaacggtcga tgacttctaa tactttttta cgagtatttt cctttacgtt tttattccca
      961 tttaccacgc gcgatactgt cgccatggat acacctgctt cgcgggcaac gtcataaatc
     1021 gttaccgtat cgtcagtgtt taacatacgt tatgtactcc ctttcaatag ttctagttct
     1081 atgaaaatta cgctttcact caagtatagt gtatcacttt ttgaaaccac tttcaagaga
     1141 taaactctat ttttttgata atacttgcaa tttttttcat tttttgaaac aatagtctat
     1201 ataataaacg aaattttcac tttttttacc actacatgct agaaagggct ccactatgtc
     1261 aaaattacat catgttaaat cctacttaga agccaacaaa atggacttgg ccatcttctc
     1321 tgatccagtt agcatctatt atctgactgg ctatcatagc gatcctcatg agcgccacat
     1381 gatgctcttt gttatgcctg accacgactc actactcttt ctccctgcct tggatgtaga
     1441 gcgtgcggtt gcgactgttg actttcctgt agccggctat atggactcag aaaatccatg
     1501 gcagattatc aagagcaaat tgccacaaaa atctttctca gcaatcggtg cagaatttga
     1561 taatttgaat ttaacccgct accatggtct tcagtccatc tttagccaac cattttcaga
     1621 cattacacct ctgattaata ctatgaaatt gatcaagtct cgtgatgaaa ttgaaaaaat
     1681 gctggttgct ggtgagtttg cagataaggc tatgcaggtt ggtttcaata acatctcact
     1741 cgatgtaacc gaaactgata ttattgctca gattgaattt gaaatgaaga aacaaggcat
     1801 ctcaaaaatg agctttgaca ccatggtctt aacaggcgac aatgccgcaa atccacacgg
     1861 tattccctca acaaataaaa tcgagaataa cgctctgcta ttgttcgacc taggcgtgga
     1921 aactttgggc tatacgtctg atatgacacg gactgtcgct gtcggtaaac ctgatcagtt
     1981 taaaaaagat atttacaact tgactctgga ggctcacatg gctgctgtca atatgattaa
     2041 gcctggtgtg actgctgggg agattgacta tgccgctcgc tctgtgattg aaaaagcagg
     2101 ttatggcgag tacttcaacc accgactcgg tcacggtttg ggaatgagtg tccatgaatt
     2161 cccatcgatt atggaaggca atgatctggt catcgaagaa ggtatgtgtt tctctgtcga
     2221 gccaggtatt tacatccctg gaaaagttgg tgttcgtatc gaggattgtg gttacgttac
     2281 caaaaatggc tttgaagtct ttacaaaaac accaaaagaa ttactgtatt ttgaagggta
     2341 acccccttct ttttgttatg cttccttcac caattttcat caaaaaaaat cagaagttcg
     2401 ctttgaactt ctgatttttc tctttgggct actaac
//
LOCUS       DBNFCX010000175         2433 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.176, whole genome shotgun sequence.
ACCESSION   DBNFCX010000175 DBNFCX010000000
VERSION     DBNFCX010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2433
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.176"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(168..650)
                     /locus_tag="AC1PJC_002225"
     CDS             complement(168..650)
                     /locus_tag="AC1PJC_002225"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002885585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HIP6621184.1"
                     /translation="MKKEVTVESFELDHTIVKAPYIRLISEEVGPKGDIITNFDIRLI
                     QPNENAMDTAGLHTIEHLLAKLIRQRIDGLIDCSPFGCRTGFHMIMWGKQDSEKIAQV
                     IKSSLEEIAEGITWEDVPGTTIESCGNYKDHSLHSAKEWAKLILSQGISTDAFERKPI
                     "
     gene            779..2392
                     /locus_tag="AC1PJC_002226"
     CDS             779..2392
                     /locus_tag="AC1PJC_002226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HIP6621185.1"
                     /translation="MNIITVVVTLVSALIGLVLGYFAISLKMKSAKETAELTLLNAEQ
                     EASNVRGRAEEQAEVILKTAERDRQTLKKELLLEAKEEARKYREEIAEEFKSERQELK
                     QIESRLTERATSLDRKDDNLTNKEKTLEQKEQSLTDKAKHIDEREQEVVKLEEQKALE
                     LERVAALSQEEAKEIILTDTRDKLTHEIATRIKEAEREVKERSDKMAKDLLAQAMQRI
                     SGEYVAEQTITSVHLPDDAMKGRIIGREGRNIRTFESLTGIDVIIDDTPEVVVLSGFD
                     PIRREIARMTMETLLQDGRIHPARIEELVEKHRVEMDNRIREYGEAAAYEVGAPNLHP
                     DLIKIMGRLHFRTSYGQNVLRHSIEVAKLAGVLAAELGENVNLARRAGFLHDVGKAID
                     REVDGSHVEIGTELAKKYKENPIVINAIASHHGDVEATSTIAVIVAAADALSAARPGS
                     RRESMEAYIKRLQDLEEIANSFEGIKQSYAIQAGREIRIIVHPNKVTDDQITILAHDV
                     REKIENNLDYPGNIKITVIRETRATDVAK"
BASE COUNT          729 a          437 c          568 g          699 t
ORIGIN      
        1 ttttcttcaa tcttttttct ttgtgttgaa aataaaaaaa ctctcagaaa cgccgaaata
       61 tcaatgtttc taagagttta atgacttgct atctttcgca aacttcttca attttttata
      121 tttttaggag tttgtctacg ttctgagcgg tgtatccgct ttttttgtta gattggtttt
      181 ctttcaaagg catcggtaga gattccctga gaaaggatta gttttgccca ttctttagct
      241 gaatgaaggc tgtggtcttt gtagttaccg catgactcaa tggttgttcc agggacatcc
      301 tcccaagtga tgccttctgc aatttcttcc aaactcgact tgatgacttg agcaatcttt
      361 tcagagtctt gttttcccca catgatcatg tggaaacctg tccgacaccc gaaaggagag
      421 cagtcgatta gcccatcgat gcgctggcga attagtttag ctaatagatg ctcgatggta
      481 tgtagaccag ctgtatccat tgcattttcg ttgggttgga taaggcgaat atcaaagttt
      541 gtaataatgt ctccttttgg tccgacttct tcagaaatta agcggatgta aggtgctttt
      601 acaatagtgt ggtctagctc gaagctttcg acagtgactt cttttttcat ggtttcctcc
      661 aaataagtga tgaatttatt ataccatatt tgacaatttg gaattgtgaa atcgtttcaa
      721 atatgataaa atagatacag attttgtgaa aatcgaatta taaaaaagag gtagaaatat
      781 gaatatcatt acagtagtag tgacacttgt ttctgctctc attggtttag tattaggtta
      841 ctttgccatt tctttgaaga tgaaatctgc aaaagaaact gcagaattga cacttttaaa
      901 cgcagaacaa gaagctagta atgttcgtgg tcgagcagaa gagcaagctg aggttattct
      961 aaaaacagct gagcgcgatc gccagacctt gaaaaaagaa ttactcttgg aagctaagga
     1021 agaagctcgt aagtaccgag aagaaattgc agaagaattt aagtcagaac gtcaagagtt
     1081 gaagcaaatc gaatcacgct tgacagagcg tgcgaccagt ttggaccgca aagacgataa
     1141 tttgaccaac aaggaaaaga ctttggaaca aaaggaacaa agtctgaccg ataaagctaa
     1201 gcacattgat gagcgtgaac aagaagttgt aaaactcgaa gaacaaaaag ctttggagtt
     1261 agaacgagtg gcggccctca gtcaagaaga ggcaaaggaa atcatcctta ccgatacacg
     1321 tgataaactg acgcatgaaa ttgcgactcg tatcaaggaa gcagagcgtg aagtaaaaga
     1381 gcgttctgac aagatggcaa aggacttgtt agcccaagcg atgcaacgta tatcaggtga
     1441 atatgtggct gagcagacga ttacatcggt tcatttaccg gatgatgcga tgaagggacg
     1501 gattattgga cgtgagggtc gaaatattcg tacctttgaa agtctcacag gtatcgatgt
     1561 tatcattgat gatacaccag aagtggttgt tctatcaggt tttgatccga ttcgccgtga
     1621 gattgcccgt atgaccatgg agaccttgct tcaagatggt cgtattcatc cagctcgtat
     1681 tgaggagttg gttgagaaac accgtgtaga gatggataac cgtattcgtg agtatgggga
     1741 agctgctgct tatgaagttg gggcgccaaa ccttcatcca gacttgatta aaatcatggg
     1801 acgtttgcat ttccgtacct cttatggaca aaatgttctt cgccactcaa tcgaagttgc
     1861 taaattagca ggtgtacttg ctgctgaatt gggcgagaat gtgaatttgg cacggcgagc
     1921 tggtttccta catgacgttg gtaaagctat tgaccgtgag gtggatggaa gccacgttga
     1981 aatcggtaca gaattggcta agaaatataa agagaatcca attgttatca atgcgattgc
     2041 tagtcaccat ggcgatgtag aagcgacaag tactattgca gtcattgtgg ctgcggcaga
     2101 tgctctgagc gctgctcgtc caggttcgcg tcgtgaatct atggaagcct acatcaaacg
     2161 tctgcaagac ttggaagaaa tcgccaacag ttttgaaggg attaaacaat cctatgctat
     2221 tcaggctggt cgtgaaattc ggattatcgt tcatcctaac aaggtcactg atgatcagat
     2281 taccatcttg gcccatgatg ttcgtgagaa aattgaaaat aatctggatt atccaggaaa
     2341 tatcaaaatc acggttatcc gtgaaacaag agcaacagat gttgctaagt aaatgtagaa
     2401 gagtccgaag ggctcttttt ctactggctc aaa
//
LOCUS       DBNFCX010000176         2295 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.177, whole genome shotgun sequence.
ACCESSION   DBNFCX010000176 DBNFCX010000000
VERSION     DBNFCX010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2295)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2295)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2295
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.177"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..510
                     /locus_tag="AC1PJC_002227"
     CDS             <1..510
                     /locus_tag="AC1PJC_002227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009986 - cell surface [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HIP6621186.1"
                     /translation="KAEQPQMEAPKKDSEAPKSDKAETDKPMPETKQPDMKQPKADDM
                     PKEQKPKADEPKAEQPQMDKPQMEAPKKDSEAPKSDKVETDKPMPETKQPDMKQPKAD
                     KPEAEKAQMPRTEGMKPESKASMMPKAEASKATLPNTGEASSAIGWLGGALATLVTGL
                     YLFKNKKEE"
     gene            1199..1327
                     /locus_tag="AC1PJC_002228"
     CDS             1199..1327
                     /locus_tag="AC1PJC_002228"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621187.1"
                     /translation="MDFESLSRFILCAVQNNTKQKIQSIDDLILAIDETYQSLDLE"
     gene            1400..1549
                     /locus_tag="AC1PJC_002229"
     CDS             1400..1549
                     /locus_tag="AC1PJC_002229"
                     /inference="COORDINATES: protein motif:HMM:NF025768.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH/ENDO VII family nuclease"
                     /protein_id="HIP6621188.1"
                     /translation="MAEATYTFHKQNSKTIHINPNTIYSGINRNEFGKRRGSYWENRA
                     KDFIP"
     gene            1677..2036
                     /locus_tag="AC1PJC_002230"
     CDS             1677..2036
                     /locus_tag="AC1PJC_002230"
                     /inference="COORDINATES: protein motif:HMM:NF025918.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HIP6621189.1"
                     /translation="MGIKYPRDYRDFVSNFGAGNFGSSEIYGVFREDFLNSGVPDSVW
                     LTLLERKDSNLPEYLVIIYAVGNGELFCFNYNKLNVNGEPTIVSFIPNKNITEYEIVY
                     DSFGDFLLDIVTSELEI"
BASE COUNT          842 a          346 c          451 g          656 t
ORIGIN      
        1 aaggcagagc aaccccaaat ggaagctcct aagaaagatt cggaagcgcc aaaatctgat
       61 aaagcagaaa ctgacaaacc aatgccagaa actaagcaac cagatatgaa gcaaccgaag
      121 gcagacgaca tgcctaagga acaaaaaccg aaagccgacg agccaaaggc agagcaacct
      181 caaatggaca aaccccaaat ggaagctcct aagaaagatt cggaagcgcc aaaatctgat
      241 aaagtagaaa ctgacaaacc aatgccagaa actaaacaac cagatatgaa gcaaccgaag
      301 gcagataaac cagaagcaga gaaagctcaa atgccacgaa cagagggtat gaagcctgaa
      361 tccaaggctt caatgatgcc aaaagcagag gcatcaaaag caactttgcc aaatacaggt
      421 gaagcaagta gcgcaatagg ctggctaggt ggtgctttag ccactcttgt cacaggcttg
      481 tatctattca aaaataaaaa agaagaatag tcatcattga ataagatatg agaattttcc
      541 tcttctgagg tcataaaaga ctccagatca tcgctataga agtcatggtt tggagtcttt
      601 ttgttaaata ttcttagaaa ataacaaaat agatatggct gcattcataa aaaatattca
      661 tttgaaagca ttctatcttt aaatattgga attatttact aactacacat cacgtcgagt
      721 gtgtgagtct tttggtgaaa aacgtagatc gattgtctat cttgtttcct ttttaaataa
      781 gttgatgaaa tcttagagaa tatatggtat atcgataaca ctaaagaatc attatgacat
      841 taatcaggaa agcaatatga gtatttggaa tcagttgaag ttggttcaat tagctagtca
      901 tgcttcttgt ggtaaaggga ttacttattg acaaagtaag tcggttctaa gtggtgaaga
      961 gtttgagctc ggtattaata aggggtatgt tagccttcaa acctactgac tggtgccgag
     1021 agctagacca tatcaggata gggagtgatg gcgaaattac cgttcgctta ctagaaagaa
     1081 cagaggtaga tttataaaat agtagaaagg ctgtaactac agtgggaaac caatgtggtt
     1141 atagcttttt gcgtttttgt ggtagaatat agctagcaat gaaatgagga tgttccgtat
     1201 ggattttgaa agcctatcaa gatttatttt atgtgcagta caaaataata ccaaacaaaa
     1261 aatacaatct attgatgatt taattctagc gattgatgaa acttatcaat ccctcgattt
     1321 agaataaaaa aatcggctat gaatttaata attgtagaga attgaattgc atcatactac
     1381 acagtaacaa gccagttcga ttgcagaggc tacatatacg ttccataaac aaaattcaaa
     1441 gacaattcat attaatccca atacaatcta ttcaggaatc aatcgcaatg agtttggaaa
     1501 gcggagagga agttactggg agaacagagc gaaagatttt attccttagt attaattaga
     1561 gaggttaaga aaatgattaa ttatgaaaaa gcaaaatcgt tgattctcga aaatatagat
     1621 atgatggatt attttggtaa ttgccccaat gatgtcatag atttagcaga aaaacgttgg
     1681 gcataaaata cccaagagat tatcgtgatt ttgttagtaa ttttggagct ggtaattttg
     1741 gctcttcaga aatttatggt gtttttagag aggatttttt aaattcaggt gtacctgatt
     1801 cagtttggct aactctttta gaaagaaaag attccaatct tccagagtat ctagtaataa
     1861 tttatgcagt gggtaatggg gaactatttt gtttcaatta caataagttg aatgtaaatg
     1921 gagaaccaac aattgtatca tttataccta ataagaatat tacggaatat gaaattgtgt
     1981 atgacagttt tggtgatttt cttttagata ttgttactag tgaattggag atataagctt
     2041 atatttcagt gactttacta cattaacccc ctctataatc agagatgatg ttggtggaca
     2101 cgtggataaa gatgatcctt cccaaaatat aggacctcac tttaatgaca ttggaggtaa
     2161 ccattatgat tatcaataaa gaaacaaata tcatcttccc taattttgat tattcttgca
     2221 atcaaaatat ttatacaaca cgttgggaaa ttgagggaat atataatcaa cgaaaaacgt
     2281 acttagagta tttaa
//
LOCUS       DBNFCX010000177         2264 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.178, whole genome shotgun sequence.
ACCESSION   DBNFCX010000177 DBNFCX010000000
VERSION     DBNFCX010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2264)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2264)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2264
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.178"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..2181
                     /locus_tag="AC1PJC_002231"
     CDS             <1..2181
                     /locus_tag="AC1PJC_002231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018378354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat-associated core domain-containing
                     protein"
                     /protein_id="HIP6621190.1"
                     /translation="MAALYDGDDNRVFTASRKEGKNTYQLFQRKPKDTSRSGGKKSPY
                     TAPAGEENSIFWYGFSQNVLQSLSTLPQTVGTIWHEIFDDISTAYHQKVAKDRATKEG
                     LVVNPPDLDNLPGEGEVTYASQVQDVLIPYTTREDTYHYYEERNYVNDINREYTEVLQ
                     TYDHDLKARETYTYGNGRASYLDNQEDTNYNYLTNQSGSVTGLTQDGEVVASSTYHLY
                     GSTKETTDTTGNPYAYNGEARDVTGLDYLRARYYDSQAGTFLTEDSYPGELTTPLTQN
                     GYAYVSNNPVNYTDPSGHFFKKLLKGAGKLLTKAKNAVVNFAKNTARAVVNVAKKAYN
                     IGRNIVNTVVNTAKGVVNWAGTQINNAKNWAVNQWNNFQRTPVYQGAQQVYKSANHYA
                     QQQQAQARAQAEQRRQQHIRDEYSQSTGIKTTPKTREAKSLFRNWGKALKEMYTHVCK
                     TAKRVKKQVANYVKKIDWKKVVKTSAYIAGEFFSVNDIYRVITGKDPLTGEKASRLEA
                     AAWLTADLLTMGGSKAAKVAKVASKANKVADTVKASKAVSKVNKAIDAGKTFVKSGIN
                     KVLDTPIGFSRQVAMAGGPAMDIGGPTLREAGQYVQKGWDNMVQAFAKNGDEVVEGTS
                     KGSKGAPPPNLSPEGAGRKGAFNEAKRKNGIPTSQNPDRVGPNLDKRGNRQPGRSYEF
                     DRIQDGETVTVTIRDDAGGHVYKDDPSQNRGPHFNDDGGNHYDY"
BASE COUNT          743 a          443 c          524 g          554 t
ORIGIN      
        1 atggcagccc tttatgacgg cgatgataat cgtgtgttta ccgccagtcg taaagaagga
       61 aagaatactt accagctctt ccagcgaaaa ccaaaagata cttctcgttc aggaggtaaa
      121 aaatctcctt atactgcacc agcgggtgag gaaaatagta tcttctggta tggctttagt
      181 cagaatgtcc tccagtcgct ctctaccttg ccacagactg taggaaccat ctggcatgag
      241 atcttcgatg atatctcaac agcctatcat caaaaagtgg ctaaggatag agccactaag
      301 gaaggccttg tggttaatcc accagatttg gacaatctcc caggcgaggg agaagtgact
      361 tatgccagtc aagtgcagga tgttctcatt ccatacacta cacgagaaga cacttatcat
      421 tactatgaag agcgtaatta tgtcaatgac atcaatcggg aatacaccga agttcttcaa
      481 acctatgacc atgatctgaa agctcgtgaa acctatacct atggcaatgg cagagctagc
      541 tatcttgata atcaagaaga tacgaactac aactacctta ccaaccagtc aggttcggtg
      601 acaggcttga ctcaagatgg agaagttgtt gcttcaagca cttatcatct ctacggctca
      661 acgaaagaaa cgactgatac gacaggcaac ccttatgcct ataacgggga ggcgagagat
      721 gtcacaggtc ttgattatct aagagcgcgt tactatgata gtcaagcagg aaccttctta
      781 acagaagata gttatccagg tgagctaacc acaccattga cacagaatgg ctatgcttac
      841 gtgtccaaca acccagtcaa ctacaccgac ccaagtgggc acttctttaa gaaattgctt
      901 aagggagcag gtaagttatt gacgaaggcc aaaaatgcag ttgttaattt tgcgaaaaat
      961 actgcaaggg ctgtcgttaa tgttgctaag aaggcataca atatcggtcg aaatattgtt
     1021 aatacagttg ttaacacagc taaaggagtt gttaactggg cgggtactca aatcaataac
     1081 gctaagaatt gggccgtcaa ccagtggaat aacttccagc gaactccagt ctatcaaggt
     1141 gctcaacagg tttacaaaag tgcaaaccac tatgctcagc aacaacaggc tcaagctaga
     1201 gcccaagccg agcaacgccg tcagcaacat attcgagacg agtatagcca gtcaacagga
     1261 atcaaaacga cacctaagac acgagaagct aaaagcctgt tccgtaactg gggtaaagcc
     1321 cttaaggaaa tgtacacgca tgtgtgtaaa acagctaaac gtgttaagaa acaagttgcc
     1381 aactatgtta agaagattga ctggaagaag gttgtgaaaa catcagctta tatagctgga
     1441 gaatttttct ctgttaatga tatttatcgc gttattacag gtaaagaccc tctgacaggt
     1501 gaaaaggcaa gtcgtttaga ggcggcagca tggctgaccg cggatctgtt gacaatgggt
     1561 ggtagtaaag ctgccaaagt tgctaaagta gcttctaaag caaataaagt ggcagacaca
     1621 gttaaagctt ctaaagctgt ttcaaaagtt aataaagcta ttgatgcagg aaaaactttt
     1681 gtcaagtctg gtatcaataa ggttttagat actccgatag gattttctag acaagttgcc
     1741 atggctggtg gtccagcgat ggatataggg ggacctactc tccgtgaagc tgggcaatat
     1801 gttcaaaaag gctgggataa tatggttcaa gcctttgcga agaatggaga tgaggttgta
     1861 gaggggacca gtaaaggttc taaaggagcg ccacctccta atctatctcc agaaggtgca
     1921 ggtaggaaag gagcatttaa cgaggcgaaa agaaagaatg gtataccaac cagtcagaat
     1981 ccagatagag tagggcctaa tcttgataag cgaggtaata ggcaaccagg taggagctat
     2041 gaatttgatc gtattcaaga tggtgaaaca gttactgtta caatcagaga tgatgctggt
     2101 gggcatgtgt ataaagatga tccttctcaa aatagagggc ctcacttcaa tgatgacgga
     2161 ggtaaccact atgattatta ataaagaaac aaatattgtt tttcatgatt ttgattattc
     2221 ttgtcatcaa aatatccata caacacgttg ggaaattgag ggaa
//
LOCUS       DBNFCX010000178         2165 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.179, whole genome shotgun sequence.
ACCESSION   DBNFCX010000178 DBNFCX010000000
VERSION     DBNFCX010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2165)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2165)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2165
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.179"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..709)
                     /locus_tag="AC1PJC_002232"
     CDS             complement(<1..709)
                     /locus_tag="AC1PJC_002232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002887133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FRG domain-containing protein"
                     /protein_id="HIP6621191.1"
                     /translation="MKEVFYVKNLEEYITTIRELNSGTHSHKYWYRGQNNSLFGLTPG
                     VFREAYVVEDKFGNKINPPRRANFYNPNGEKVIMLPANRLLSEFKKKVKDKICDIIEP
                     QNDIQWLELAQHYGLPTLLLDWTTDPLVGLYFAISTVDTSIDYTEPTDKTLFDGENEY
                     SEQIENCASVWVMNPLEVNKITFNDVFQSKVLNSQHDFGRIQEEQKYPIGTFCFEGMK
                     GNPRIVRQSGNFTYTCHK"
     gene            complement(1070..1648)
                     /locus_tag="AC1PJC_002233"
                     /pseudo
     CDS             complement(1070..1648)
                     /locus_tag="AC1PJC_002233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636902.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0030420 - establishment of competence for
                     transformation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
     gene            complement(1712..>2165)
                     /locus_tag="AC1PJC_002234"
     CDS             complement(1712..>2165)
                     /locus_tag="AC1PJC_002234"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621192.1"
                     /translation="GSLYVNTGLERTKEFALSREKGSELITYAFRLYNFCKNHKWFEQ
                     NDFELQFEKQFSELISVFSEENLPVVLSFETNTASIAAETGVASKEYIDWFLDFLYSD
                     EVRQRMSESLRITHPAVISPENICIRIFFNGIWSEVIKLTEFSIGEYL"
BASE COUNT          659 a          462 c          336 g          708 t
ORIGIN      
        1 ttttatgaca ggtataagta aagttcccag attgtctcac aattcttgga ttacctttca
       61 tcccttcaaa gcagaatgtt ccaattgggt acttttgttc ttcttggatt ctaccaaagt
      121 catgttgact atttaaaacc ttactttgga aaacatcgtt aaaagttatt ttattaacct
      181 ctaatggatt cattacccag acagacgcac agttttctat ttgttcagaa tattcattct
      241 caccatcaaa aagggttttg tccgttggtt cagtataatc tattgaggta tctaccgttg
      301 aaattgcaaa ataaagtcca acgagagggt ctgtagtcca gtcaagtagt aatgtgggta
      361 atccatagtg ttgagcaagt tccaaccact gaatatcgtt ttgtggctca ataatatcac
      421 aaattttatc tttaactttc tttttgaatt cagacaataa ccgatttgcg ggtaacatta
      481 taactttctc accgtttgga ttgtaaaaat tagcacgcct cggtgggttg attttattcc
      541 cgaatttatc ttcaactaca taagcctccc taaaaacacc cggagtcaaa ccgaacaaag
      601 aattattttg gcctctgtac caatatttat gtgagtgcgt tccagaatta agctcacgaa
      661 ttgttgtgat atactcttct aagtttttta cataaaatac ttctttcatt caaatatcct
      721 ctattcaatt tattaactaa attatagcaa aaagcggtta tatcataccg atacaaccgt
      781 tctattttta aaagaaagag ttacatttaa tttcaaccgt actctcccga cgcaagtcat
      841 caacttctat agctttattc ctctatttct caaatactat aactgaatat ttcaatttct
      901 gacttctgct gagtcttcgt cgtctaatca cattcaacct cttctactta ctgagtaaga
      961 gtatttaaat gtttgctatg ataatgataa tatttgggac aggtgtcaca ttctcacaaa
     1021 ccaagtcctc cacgcttact tctgcttcaa cattcacaat cttactcatt tatttcaccg
     1081 tttcaatcct ccactccctc caacctcgga agcggatggc tccttgctgg tcggtacgat
     1141 agacttggat attccgactg tcaaagcggt ccaaggtttc ttgatgagga tgcttgtagc
     1201 ggttattttc tccagcagat accaaggcaa tcttggcttc gatatggtcc aaaaattcag
     1261 gataggaaga acctttggag ccgtggtgac cggctttgag gacatcgaca ggcaggttgg
     1321 gataggtttc tatcaagtcc aactcccctt gctccaggtc tcctgtaaag agaaagttag
     1381 tttccaacaa gcgaccgtaa aggacaatag agtcattatt accaccgtct cctgtcccat
     1441 ctggataaag gacttccagg taagagtcaa aaattggtag gcggtcgccc acttttacca
     1501 catggacagg cacattgatt tctttcaagg ttgctacaaa gtcaggcacc gtcagacttc
     1561 cctgcgacaa gtaaatccgt ccaatttgca cctgcttcgc cacttccagc acatcaccca
     1621 catggtctgt gtcggtatga gtactgattt taatacaatt atttaagtaa aaaaaagtag
     1681 aacttttcaa ataaagctct acctaatcat tttacaaata ttccccaatt gaaaactcag
     1741 ttagcttaat tacttcactc caaattccat taaaaaatat acgaatacat atattttctg
     1801 gagaaataac agctgggtga gtaattctaa gtgattcaga cattcgctgt ctcacctcat
     1861 cactatatag aaaatctaga aaccaatcaa tatattcctt actagcaacg ccagtttcag
     1921 ccgcaattga tgcggtattc gtttcaaatg ataaaacaac aggtaaattc tcctcagaaa
     1981 atacacttat caattcacta aactgttttt caaactgtaa ctcaaaatca ttttgttcga
     2041 accatttatg atttttacaa aaattatata acctgaaagc atatgtaatt aattcagaac
     2101 ctttttctct acttaatgca aattctttag ttctttctaa tccagtatta acataaaggc
     2161 ttccg
//
LOCUS       DBNFCX010000179         2157 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.180, whole genome shotgun sequence.
ACCESSION   DBNFCX010000179 DBNFCX010000000
VERSION     DBNFCX010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2157)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2157)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2157
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.180"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..477
                     /locus_tag="AC1PJC_002235"
     CDS             <1..477
                     /locus_tag="AC1PJC_002235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2142 domain-containing protein"
                     /protein_id="HIP6621193.1"
                     /translation="KVMINSLFINNRNDHLNGILTVGIFGYFGWFVTQLPLWLIFIDI
                     FIFTLLLFNDGNLKISKTEGLASLFVLPVQVAIIVAGMYFAWTPTAIGPNAIISQGAQ
                     GRYFTPFLVYLFPACLMLKEQVSVSVKQKYLIRLITGTVVINFIMYLFLIVDYYWL"
     gene            502..1491
                     /locus_tag="AC1PJC_002236"
     CDS             502..1491
                     /locus_tag="AC1PJC_002236"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006486 - protein glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HIP6621194.1"
                     /translation="MNILFTLNDAFVPQVAACMGSIMRTLNEDDTCHFYLFSDGISQQ
                     NKEKLHQFVTDGGNKLTIVELENLESYFDFEVDTNGWASVVLARLLVDKLLPEEVDRI
                     IYLDGDTLVLENIRELWEVDLEGKVLGMCPEPTASSERREGLNLGTYTYHNAGVLLID
                     LKRWRSKSIGTIIFDYYKEKNGELFANDQDALNGALKEEIKTLSITYNYFNIFDVYPY
                     RTLEKLSRPSTFISKEEFVKIRKQPRIVHFLGEERPWRIGNKHRFREDYVSALNQTPW
                     RGTQFESGWQLYFFCFNLFNMVMKPFPMLRYKIITVLIPVFMKYRKIRLQKGV"
     gene            1494..>2157
                     /locus_tag="AC1PJC_002237"
     CDS             1494..>2157
                     /locus_tag="AC1PJC_002237"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HIP6621195.1"
                     /translation="MKFSVIIPAYNVADYLEECVYSVLNQTYEEFEILLVDDGSTDGK
                     TSNICDKLAAKDDRVKVFHQTNGGQSIARNTGIKNASGDYILFLDGDDFWTDVHFLDE
                     INEELHSHEEVVDAVIYPFSYWYGNADIRVRDFPQKLPRHEIITDSVLLVETGALIAP
                     VWNKCVRRELFADSLMFPDGLMYEDGIWCADLLKIITCCCVIENSNYMYRQNRDGSFT
                     NKI"
BASE COUNT          693 a          279 c          446 g          739 t
ORIGIN      
        1 aaagtgatga taaacagttt atttatcaat aatagaaatg atcatcttaa tggtatttta
       61 acggttggta tttttggtta ttttggctgg tttgtcactc aattacctct ttggttaatt
      121 ttcatagata ttttcatttt tacgttatta ttgtttaatg atggaaattt aaagataagt
      181 aaaacagaag gtcttgcttc gttatttgta ctccctgttc aggtagctat cattgtagcg
      241 ggcatgtatt ttgcatggac accgacagct attggaccaa atgcaataat ttctcagggg
      301 gcacaaggaa gatactttac tccgttttta gtctatctat ttccggcttg tttaatgtta
      361 aaagagcagg taagtgtatc ggtaaaacag aagtatttga tacggttgat cactggcaca
      421 gtagtcatta actttatcat gtatctattt ttgatagtgg attattattg gttgtaattt
      481 aagatagtgg aagagggaaa cgtgaatata ttatttacat tgaatgatgc ttttgttccg
      541 caagtagcag cttgtatggg ctcaatcatg cgaacattaa acgaagacga tacatgccat
      601 ttttatcttt tctcagatgg tattagtcaa cagaataaag aaaaacttca tcaatttgtt
      661 accgacggag gaaataaatt gacaatcgtt gaattggaaa acttggaatc atattttgat
      721 tttgaagttg acacaaatgg ttgggcttcg gttgtacttg caagattact tgtagataaa
      781 ttactgcccg aagaagttga tagaatcatc tatttagatg gagatacttt agttttagaa
      841 aatattcggg agctatggga agtagatttg gaggggaaag tccttggaat gtgcccagaa
      901 ccgacagctt cgtctgagag aagagaaggc ttaaatttgg gtacgtatac atatcataat
      961 gcgggagttc ttctaatcga tttgaaacgg tggcgttcaa aaagtatagg aacaattatt
     1021 tttgattatt ataaagaaaa aaatggagag ctttttgcta atgatcaaga tgcactgaat
     1081 ggagcgttga aagaagagat aaaaacactc tcaatcactt ataattattt taatattttt
     1141 gatgtttatc catatcgtac attggaaaaa ttaagtaggc cttcaacgtt tatttcaaaa
     1201 gaagaatttg taaaaattcg taagcaacca cgtattgttc attttttagg cgaagaacgt
     1261 ccatggagaa tcggaaataa acatcgattt agagaggact atgtttctgc attaaatcag
     1321 acgccatgga gaggtactca atttgagagt ggttggcagc tttacttttt ctgctttaat
     1381 ctttttaaca tggttatgaa gccttttcct atgttgcgct ataaaattat tacagtctta
     1441 attcctgtat tcatgaaata taggaaaatt agattacaaa aaggagtcta ggtgtgaagt
     1501 tttccgttat tatcccagcg tacaatgttg ctgattatct ggaagaatgt gtgtatagtg
     1561 tactgaatca gacttatgaa gaatttgaaa tattgttggt agatgacggt tctacagatg
     1621 gtaaaacctc caatatatgc gataaattag cagctaaaga tgatagggtg aaggtatttc
     1681 atcaaactaa tggtgggcaa tcaattgcga gaaatacggg aataaaaaat gctagtggtg
     1741 attatatttt attcctagat ggtgatgatt tttggactga tgtacatttt ttagatgaaa
     1801 tcaatgaaga actacattct cacgaggaag tggtagatgc agtaatttat ccattttcat
     1861 actggtatgg taatgctgat ataagagttc gtgatttccc tcaaaaatta cctagacatg
     1921 aaattattac tgattctgtt ctacttgtag aaacaggcgc attgattgct cctgtttgga
     1981 acaagtgtgt tcgcagagaa ctatttgcag attctttgat gtttccagat gggttaatgt
     2041 acgaagatgg tatttggtgt gcagacctat taaaaataat aacttgttgt tgtgtcattg
     2101 aaaattctaa ttatatgtat agacaaaata gagatggaag ttttactaac aaaatta
//
LOCUS       DBNFCX010000180         2050 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.182, whole genome shotgun sequence.
ACCESSION   DBNFCX010000180 DBNFCX010000000
VERSION     DBNFCX010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2050)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2050)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2050
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.182"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..1712)
                     /locus_tag="AC1PJC_002238"
     CDS             complement(<1..1712)
                     /locus_tag="AC1PJC_002238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015639625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HIP6621196.1"
                     /translation="MNYTIKSGDSLSAIAAKFNTTVAELQRLNGITNPDKIYAGQVIK
                     VKATGGTSSSTTTTSTYVVKSGDTLSGIAARFGTTVSALQSLNGISNPDQIYAGQVLR
                     INGTGGGSPVGGITTTYTVVSGDTLSGIATRFGTTVSALQSLNGISNPDQIYAGQVLR
                     INGTGGGSPVGGITTTYTVVSGDTLSGIATRFGTTVSALQSLNGISNPDQIYAGQVLR
                     INGTGGGSPVGGITTTYTVVSGDTLSGIATRFGTTVSALQSLNGISNPDQIYAGQVLR
                     INGTGGGTPVGGTIETYTVVSGDTLSGIAARFGTTVSAIQSLNGISNPDQIYAGQVLR
                     INGTGGSYIYDGNVSVTLNGNGYLVTAEQLRQIGWTVVNTNMVNDLNNCLRRYNITTL
                     SRIRHFISQCSHESGGGKWTMELASGEAYNWRSDLGNTVAGDGPKYKGGGYIQLTGRY
                     NYTRFAAAMGDQRIVNEGVTYVAAKYPWTSAGFWWHMNNMNALCDLNPTVEQVTRRVN
                     GGYNGLEDRKYWYNRCVAVITSTTLIPKPISGDGNQNNSGFTYSLPTRGGAGFGTIQD
                     FIQY"
BASE COUNT          633 a          450 c          364 g          603 t
ORIGIN      
        1 atatattgaa tgaaatcttg aattgttcca aaacctgctc cacctctagt tggtaatgag
       61 taagtgaatc cactattatt ttgattacca tctccagaaa taggctttgg aatcagtgtt
      121 gtacttgtaa tcaccgctac acaacgatta taccaatatt ttctatcctc aagtccgtta
      181 tagccaccat taacacgtcg tgtcacttgc tcaacagttg gatttaagtc acacaaagca
      241 ttcatattat tcatgtgcca ccaaaaacca gcacttgtcc aagggtactt agctgctaca
      301 taagtcacac cttcattaac aatccgctgg tctcccattg ctgctgcaaa tcttgtataa
      361 ttgtatcgac cggtcaactg aatgtagcct ccacctttat atttcggtcc atcaccagct
      421 acagtattcc ctaagtctga gcgccaatta taggcttcac ctgaagcaag ttccatcgtc
      481 cacttacccc ctccagactc atgactacat tgactgatga aatgacgaat gcgagatagt
      541 gttgtaatat tataacgtcg caagcaattg ttcaaatcat taaccatatt agtgtttaca
      601 actgtccaac caatttgacg aagttgttct gcagttacca aatatccatt cccattaaga
      661 gtgacagaaa catttccatc ataaatatat gaaccacctg taccattaat acgaagaact
      721 tgacctgcat agatttggtc tggattggaa ataccattca ggctttgaat ggctgagact
      781 gtggtgccaa agcgtgctgc aataccactt aaggtatcgc ctgaaactac cgtataagtc
      841 tctatggttc cccctacagg agtgccacca cccgtaccgt taatacggag aacttgaccc
      901 gcatagattt ggtctggatt ggaaataccg ttcagactct gaagggctga aacagttgta
      961 ccaaagcgtg tagcaatacc actcaaggta tcacctgaaa ctaccgtata agtcgttgtg
     1021 attcccccta caggagatcc accacctgta ccattaatac gaagaacttg acccgcatag
     1081 atttggtctg gattggaaat accgttcaga ctctgaaggg ctgaaacagt tgtaccaaag
     1141 cgtgtagcaa taccactcaa ggtatcacct gaaactactg tataagtcgt tgtgattccc
     1201 cctacaggag atccaccacc tgtaccatta atacgaagaa cttgaccggc gtagatttgg
     1261 tctggattgg aaataccgtt cagactctga agggctgaaa cagttgtacc aaagcgtgta
     1321 gcaataccac tcaaggtatc acctgaaact actgtataag tcgttgtgat tccccctaca
     1381 ggagatccac cacctgtacc attaatacga agaacttgac cggcgtagat ttggtctgga
     1441 ttggaaatac cattcagact ttgaagagct gagactgttg taccaaaccg agctgcaata
     1501 ccactcaagg tatcacctga ttttacaaca taggtgctag tggtagttgt gctagaagac
     1561 gttccaccag tagcttttac cttgataact tgaccagcgt aaatcttatc tggattagta
     1621 attccattaa gacgttgcaa ttccgcaaca gttgtattaa atttagcagc gattgcgctt
     1681 agagagtcac cagatttaat tgtataattc attttattcc tctttcttta tgtaaaatac
     1741 gatattagtt aaccaaacaa aaatatgatg ataagttgga cagcggatat atctcatttc
     1801 attctcctta tattagtcag aaaagagtaa agtaatgaag caattgaata agatttttac
     1861 cccttcctaa ctatctaagt acttaattcg aggctttttc cgctttctat aaaaaaagtt
     1921 taatgatatt ggaagtttta tagttctaca aattccattg ccaaaaaata cacagctcag
     1981 aatcctagct gattagaaaa ttgtttttgt cgactactat atatgaatgt agtaaatata
     2041 ctataatata
//
LOCUS       DBNFCX010000181         1899 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.183, whole genome shotgun sequence.
ACCESSION   DBNFCX010000181 DBNFCX010000000
VERSION     DBNFCX010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1899)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1899)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1899
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.183"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            82..1626
                     /locus_tag="AC1PJC_002239"
     CDS             82..1626
                     /locus_tag="AC1PJC_002239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011681503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HIP6621197.1"
                     /translation="MSLQEEIKKRRTFAIISHPDAGKTTITEQLLYFGGEIREAGTVK
                     GKKTGNFAKSDWMDIEKQRGISVTSSVMQFDYAGKRVNILDTPGHEDFSEDTYRTLMA
                     VDAAVMVVDSAKGIEAQTKKLFEVVKHRNIPVFTFINKLDRDGREPLDLLQELEEVLG
                     IASYPMNWPIGMGKSFEGLYDLHNKRLELYRGDERFASLDEGDKLFGSNPFYAQVLDD
                     IELLAEAGNEFSEQAILDGDLTPVFFGSALTNFGVQTFLDTFLEFAPEPHGHKTTTGD
                     IIDPLNKDFSGFVFKIQANMDPRHRDRIAFVRVVSGEFERGMAVNLPRTGKGAKLSNV
                     TQFMAESRENVENAVAGDIIGVYDTGTYQVGDTLTVGKNKFEFEPLPTFTPEIFMKVS
                     AKNVMKQKSFHKGIEQLVQEGAIQLYKNYQTGEYMLGAVGQLQFEVFKHRMEGEYNAE
                     VVMTPMGKKTVRWIKPEDLDERMSSSRNILAKDRFDQPVFLFENDFALRWFADKYPDV
                     ELEEKM"
BASE COUNT          524 a          413 c          486 g          476 t
ORIGIN      
        1 gatgaatcca atgtaaatcg aataggataa gagctcagct ctgctatgaa tcaaaataca
       61 aaaaaatgaa aaggaaacat tatgtcacta caagaagaaa tcaagaaacg tcgcaccttt
      121 gcgattatct ctcacccgga cgcgggtaag accactatta ccgagcagtt gctctacttt
      181 gggggtgaga ttcgtgaagc aggtacggtc aaggggaaaa agactggtaa ctttgccaaa
      241 tctgactgga tggatattga gaagcaacgt ggtatctctg ttacctcatc tgtcatgcag
      301 tttgactatg caggcaagcg tgtcaatatc ctagatacac cagggcacga ggacttctca
      361 gaagacactt atcggacctt gatggcggtc gatgcggctg tcatggttgt ggactctgcc
      421 aagggtatcg aggctcagac caaaaagctc tttgaggttg ttaagcaccg caacatccca
      481 gtctttacct tcatcaacaa gttggaccgt gacggtcgtg agccacttga tttgctgcaa
      541 gagttggaag aagtcttggg catcgctagc tatccaatga actggccaat tggtatgggg
      601 aaatccttcg agggtctcta tgacctccat aacaaacgct tggaactcta ccgtggtgac
      661 gagcggtttg caagcttgga cgagggtgac aagctctttg gttctaaccc cttttatgca
      721 caagttctgg acgatatcga gctcttggcg gaagctggga atgaattttc agagcaggcg
      781 attttggacg gcgatttgac acctgttttc ttcggctcag ccctgacaaa ctttggtgtg
      841 cagaccttcc ttgacacctt cttggaattt gctccagagc cacatggtca taagacgacg
      901 actggtgaca tcattgatcc gctcaacaaa gatttttcag gctttgtctt caaaatccaa
      961 gccaacatgg accctcgtca ccgcgaccgt atcgcctttg tccgtgtggt ttcgggcgaa
     1021 tttgaacgcg gtatggcggt taacctgcct cgtacaggta agggagctaa gttgtccaac
     1081 gtgacgcagt tcatggccga gtcccgtgag aatgtggaaa atgcagtagc gggtgacatt
     1141 atcggggttt acgatacagg gacctatcag gtaggagata ccttgaccgt aggcaagaac
     1201 aagtttgaat tcgagccact accgactttc acacctgaaa ttttcatgaa agtttctgcc
     1261 aaaaacgtca tgaaacaaaa atccttccac aagggaattg agcaactggt ccaagaagga
     1321 gctatccagc tctacaagaa ctaccagact ggcgagtata tgctgggtgc cgttggtcag
     1381 ctccagtttg aagttttcaa acaccgcatg gaaggcgagt acaatgctga ggtagtcatg
     1441 actccaatgg gtaaaaagac agtccgctgg attaagccag aagacctgga tgaacgcatg
     1501 tcatcaagcc gcaacattct agccaaagac cgctttgacc aaccagtttt cctctttgaa
     1561 aacgacttcg ccctccgctg gtttgcggac aagtatccgg atgtggagtt ggaagagaag
     1621 atgtagcaaa catctgggag atgtttgcta tcgggagatg ggaactgacg gcagtcagtt
     1681 taccgttgaa taaagtctgg gtggagtgaa acagttcggg gaactgtttc agcccgagcc
     1741 tagatataga gaagcgaggt aaaaagtggg aataggagct gacggtagtc agtttacagc
     1801 tgtacagctt tgaaaatcac tatctactcg aaataataga ggaataagga tcggttaatc
     1861 cgatcctttt cttttacctc gtttctatgg gggattttt
//
LOCUS       DBNFCX010000182         1885 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.184, whole genome shotgun sequence.
ACCESSION   DBNFCX010000182 DBNFCX010000000
VERSION     DBNFCX010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1885)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1885)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1885
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.184"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            387..>1885
                     /locus_tag="AC1PJC_002240"
     CDS             387..>1885
                     /locus_tag="AC1PJC_002240"
                     /inference="COORDINATES: protein motif:HMM:TIGR01168.1"
                     /note="The YSIRK form of extended signal peptide directs
                     nascent proteins to the cross-wall site, while signal
                     peptides lacking YSIRK direct proteins instead to the cell
                     pole. A large fraction of YSIRK proteins are surface
                     proteins anchored by sortase-mediated processing of a
                     C-terminal LPXTG motif; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK-type signal peptide-containing protein"
                     /protein_id="HIP6621198.1"
                     /translation="MRKFKRGLASVTVGATLFMAGAALETLVVPQAAVVYAAEETYSV
                     NGNWTFTDNIPTSNTNVNPQMTAWDYTPHTAGQTTVTQQDGSTVTVTATITPTNGNGV
                     GVSYLVPGDDQSYYKATAEMLAGNPDPATIPAMGIYLQPSPSTPGTSLADKLNYSGVV
                     ENAELTLTFSEEVTNPIIDLSGVGGSGKAIVDDTTGRVYVAKGSFNSTNFELITPGVK
                     FEQLTGTNLTVTDTTLQVTEKNTYDKAVVGADDLYLGDYRLPNMVPAGTGSIRLVGTF
                     KQVTFKLYHQTTPFSEYPTATYQTSPLFFDNGRIGDGVNGLNKFWSDSVREVSDSTTN
                     ADLLRFSVRLSNTKYGSVVVNYVDTEGNVIGTEFKDTTNQAEGTAYDTTTNTGTVASD
                     ATTERPAVITKDGKTYKLVAKDTTATVGTVKADGSLSENAGSFTFGTDTPTGTVAEGT
                     KSITYVYEEVKGSVIVDYVDTDGNKIGTQFVDTANVAPGTTYNTANDTGT"
BASE COUNT          630 a          348 c          397 g          510 t
ORIGIN      
        1 cacaataaat tcatataaaa aagatatttt gataaatttt aggaagatcg aaatagaata
       61 aatattcaaa aatattcaag caagagaaat atagtataat ggaatatttt tgtgttgctt
      121 tattaaaata cgaatgaaac agtattccta ctgaaagaat gttcaaaatt agctaatttg
      181 aaatatttgc tacccggaaa tacacataaa aaacaaaaca agtatgagcc tttttgattg
      241 acgaattcca agataactta tataatcagc ttatagattt tcgcttttta ttatatgggg
      301 tggatgtcaa aaaaattagg ggagaattta gacatatgtt taaagatcaa tcaaaaaaga
      361 tgatcaagaa acaggagtat ttctcattgc gcaaatttaa gcgtgggctt gcttctgtta
      421 ctgtaggtgc aaccctgttt atggcaggtg cagcattgga gacgcttgtg gtaccacaag
      481 cagcggtggt atatgcagca gaggaaactt attctgtaaa tggaaactgg acatttacgg
      541 ataatattcc aacgagcaat accaatgtta acccacaaat gacagcctgg gactacacac
      601 cacatacagc tggtcaaact actgtaacac aacaagatgg ttctactgtt actgtgacgg
      661 caactatcac tccaacaaat ggtaacggag tcggtgttag ctaccttgta ccaggtgatg
      721 atcaatcata ttacaaggct accgcggaaa tgttggctgg gaacccagat cctgcaacta
      781 ttccagcaat ggggatttac ctccaaccat ctccttcgac tccaggaaca agcttggctg
      841 ataagttgaa ttacagtggc gtggttgaga atgctgagtt gaccttgact tttagcgaag
      901 aagttactaa cccaatcatc gacctttcag gtgttggtgg tagtggtaaa gcaattgttg
      961 atgatactac cggtagagta tatgttgcta agggatcatt taacagtacc aacttcgagc
     1021 tgattacacc tggtgttaag ttcgagcaat taacagggac aaacttgaca gttacggata
     1081 ctactcttca agtaactgaa aaaaatactt atgataaggc agttgttggt gcggatgatt
     1141 tgtaccttgg cgactaccgt cttccaaaca tggtaccagc tggtacaggt tcaattcgat
     1201 tggtaggcac ttttaaacaa gtgaccttca agctttacca tcaaacaact ccgttttcag
     1261 agtacccaac ggcaacatat caaacatcac cacttttctt tgataacggt cgtatcggag
     1321 acggtgttaa tggtttgaac aaattctggt cggatagcgt tagagaagta agtgactcaa
     1381 cgacaaacgc ggatttgcta cgtttctcag ttcgtttgag caatactaag tacggttcag
     1441 tagtagttaa ctatgtcgat actgaaggta acgtaatcgg aactgagttc aaagatacta
     1501 caaaccaagc agaaggcaca gcctacgata caacgactaa tactggaaca gtcgcatcag
     1561 atgctacaac tgagcgtcca gcagtgatta ccaaagatgg taagacatac aagttggttg
     1621 ctaaagatac aactgcaaca gttggtacgg taaaagctga cggtagcttg tctgaaaatg
     1681 ctggaagctt tacattcggt acagatacac caacaggtac agttgctgaa ggtactaaat
     1741 caatcactta cgtatacgaa gaagtgaaag gttcagttat cgttgattac gttgatacag
     1801 acggaaacaa gatcggtaca cagtttgttg atactgccaa tgtagcgcct ggtacaactt
     1861 acaacacagc aaatgataca ggcac
//
LOCUS       DBNFCX010000183         1867 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.185, whole genome shotgun sequence.
ACCESSION   DBNFCX010000183 DBNFCX010000000
VERSION     DBNFCX010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1867)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1867)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1867
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.185"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..233)
                     /locus_tag="AC1PJC_002241"
     CDS             complement(<1..233)
                     /locus_tag="AC1PJC_002241"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621199.1"
                     /translation="MNEKSIILKRYKKKHGRENQFFITSYIGIDLINEDTKKPENLST
                     SWKPKNIDNSKNESKLYIKRASLVYSVSSFESYA"
     gene            complement(247..336)
                     /locus_tag="AC1PJC_002242"
     tRNA            complement(247..336)
                     /locus_tag="AC1PJC_002242"
                     /product="tRNA-OTHER"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
     gene            519..>1867
                     /locus_tag="AC1PJC_002243"
     CDS             519..>1867
                     /locus_tag="AC1PJC_002243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003105126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009007 - site-specific
                     DNA-methyltransferase (adenine-specific) activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HIP6621200.1"
                     /translation="MNLSTKMIEEKFNITRQTLHNWINEGILAPPKKDFRNWYIWSDE
                     DVENIQNIIDKKTADNNSYQINETTLKIENRRYLGSKQKMLNFISEVVENNVSDVKTV
                     ADIFGGTGVVSDLFRKQGKKIIINDILHSNVVNYNTWFGNEDIDYNKIISIIGELNSL
                     TPVSDNYVSKNFGDKYFSIENARKIGLIRESIENYDVNGREKSFLLTSLLYAMDKVAN
                     TVGHYDAYRKKMDTLNPIHLKVPENNLNSDNEIYSEDANDLVKKIQADLVYIDTPYNS
                     RQYGDAYHLLENIVDWKKPELSGIALKMVNRSHIKSKYSTSKAPEAFEDLIKNIHAKY
                     ILVSYNNMAKKGSGRSNAKISNEEIIEILKDKGKVKVFETPFKVFTTGKTNIDDHKEI
                     LYLCETNDNSITKKKKDIVPIQSAINYTGGKFKLIPQLLPLFPKKINNFYDVFAGGA"
BASE COUNT          702 a          272 c          284 g          609 t
ORIGIN      
        1 gcataactct cgaagctcga tactgaataa accaaggaag ctcttttgat atataactta
       61 gactcgttct tactgttgtc tatatttttt ggtttccagc ttgtactcag attttctggt
      121 tttttagtat cttcatttat caaatctatt ccaatgtagg atgtaataaa aaattggttc
      181 tcacgcccat gctttttttt atatcttttt agaattattg atttttcatt cattctatac
      241 tcccaataga tgctgttgga attgaaccaa ctcctcaacc gttaaagatt ttttaaaata
      301 gttaaaggtc acgtgctacc actacaccaa acacctaaat ctattttatc tgtacaactg
      361 aatattgtca agaaactcaa tagatatttg tttctcaaaa atagtgtaaa aagtagcagt
      421 cgactccgat tattttttat agataaaatt tataacttat gttatactaa atcaattgta
      481 aaaagaataa gatgcgtagt tgcataaagg aagattaaat gaacctatca acaaaaatga
      541 ttgaagaaaa attcaatata actcgtcaaa cactccataa ttggattaat gaaggtatcc
      601 ttgcacctcc taaaaaagat tttagaaatt ggtacatctg gtctgatgaa gatgttgaaa
      661 atattcaaaa tattattgat aagaaaacag ctgataataa cagctatcaa atcaatgaaa
      721 ctacattaaa aattgaaaat cgacgatact taggttctaa acaaaagatg ttaaatttta
      781 taagtgaggt tgttgaaaat aatgtttcag atgtcaagac tgttgctgat atttttggag
      841 gtacaggtgt agtctctgat ttatttcgga aacaaggtaa aaagattatt ataaatgata
      901 ttctacattc aaatgtagta aactataata cttggtttgg aaatgaagat attgattaca
      961 ataaaattat ttctattatt ggtgagctaa atagccttac acctgtatcc gacaattatg
     1021 tttcaaaaaa ctttggagat aaatacttct ctatcgaaaa tgccagaaag attggtctaa
     1081 ttcgagaaag tatcgaaaat tatgatgtaa atggtcgtga gaaatcattt ctactgactt
     1141 ctttactcta tgcaatggac aaggttgcaa ataccgtagg acattatgac gcttatagaa
     1201 aaaaaatgga tactttgaat ccaattcatt taaaagttcc tgaaaataat ttgaattctg
     1261 acaatgaaat ttatagcgaa gatgcaaatg atttagttaa gaagattcag gcagatttag
     1321 tttatatcga tactccttat aactccagac aatatggtga tgcctatcat ctcttggaaa
     1381 acattgtaga ttggaaaaaa cctgaattat caggtattgc tttaaaaatg gttaacagaa
     1441 gccatataaa gtcaaaatat tccacctcaa aagcacccga agcttttgaa gacttaataa
     1501 agaacataca tgcgaagtac atattagtgt cgtataataa tatggctaaa aaagggagtg
     1561 gacgctcaaa tgctaaaatt tcaaacgaag aaattattga aattttaaaa gataaaggaa
     1621 aagtaaaggt ttttgagacc cctttcaagg tattcacaac tggaaaaaca aatattgatg
     1681 accacaaaga aatactgtac ctttgtgaaa caaatgataa ttctatcacc aaaaagaaaa
     1741 aagacattgt tcctatccaa tctgcaataa actatacagg tggtaagttt aaacttattc
     1801 ctcaattact cccactattt cccaaaaaaa ttaataattt ttatgatgtt tttgctggtg
     1861 gtgctaa
//
LOCUS       DBNFCX010000184         1816 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.186, whole genome shotgun sequence.
ACCESSION   DBNFCX010000184 DBNFCX010000000
VERSION     DBNFCX010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1816)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1816)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.186"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(65..1597)
                     /locus_tag="AC1PJC_002244"
     CDS             complement(65..1597)
                     /locus_tag="AC1PJC_002244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HIP6621201.1"
                     /translation="MLLATQHLILDHQKDLRNLVHDLNLSVNPGDKIAVIGEEGNGKS
                     SLLLTLIDSTLIADYLLISGSIHRYFHSPVYIPQGLPLEMAELTLNDYFFGDMDSDID
                     YRLLYLYAEQLQFNSERFASQQLIGSLSGGEKLKIQLIKSLATPSDIIFLDEPSNDLD
                     LDTLLWLENYIITSPKTILFVSHDEDFLSRTATKIIHLESVKKKTLAQTKVKELGYKD
                     YALGRQQAYQKQVQQARNDKKEFDKAMNKHLRQKSQVRHTLLNTHDATLGRLIAKKMK
                     NVLSREKRYERMKENLAQVPFHEDAISLFFSDISPLPARKQVLHLENFQLNIGGRQLV
                     QNIHFNLNGQEKIGIIGQNGIGKSSFLKIIYQKLRQRADINLGYMPQHYTEVLDESKT
                     PLDFLLENGNREQEQLILTHLASLQFTRQEVHHKICELSGGQKAKLLLLKMVLDQANF
                     LLLDEPSRNFSPTSQPYIRQLFADYPGGLVCVSHDRRFLKEVCQRIYRLTENGLEELK
                     QI"
BASE COUNT          501 a          311 c          389 g          615 t
ORIGIN      
        1 tagcatggct tcattcttta tgaataaata aaaggaaatt tggcgtgtgt gccattttcc
       61 ttttttatat ctgtttgagt tcttccagtc cgttttcagt tagtcggtag attctttgac
      121 aaacttcttt caaaaagcgt ctgtcgtgtg atacgcatac caaaccacct ggataatcgg
      181 caaatagttg acgaatatat ggctgagaag taggagagaa gtttcgactg ggttcatcta
      241 ataagagaaa attggcttga tcaagaacca tttttaacaa gagtaacttg gctttttgtc
      301 cccccgaaag ttcacagatc ttgtgatgaa cttcttgtcg tgtaaactgc agactggcta
      361 gatgcgttaa gataagttgt tcctgctcac gattaccatt ttctaataaa aaatcaagtg
      421 gagttttaga ctcatcaagg acttctgtat agtgctgagg catgtagccc aagtttatat
      481 ctgctcgttg cctgagtttc tgatagatga tctttagaaa gctggattta cctattccat
      541 tttgtccaat gatgccaatt ttctcttgtc catttaagtt gaaatggatg ttttgaacta
      601 attgtcgccc tccaatgttc aattggaagt tttctaagtg aagcacttgt tttctagctg
      661 gtagtggtga aatatctgag aagaagaggg aaatggcatc ttcatgaaaa ggaacttgtg
      721 caagattttc cttcattctt tcatagcgtt tttcacgcga taagacattc ttcattttct
      781 tggctatgag ccgtcctagt gtggcatcat gggtgttgag caaggtatga cgaacctgtg
      841 atttttgacg taggtgctta ttcatggctt tgtcaaattc ttttttgtcg ttccgagctt
      901 gttggacttg tttctgatag gcttgttggc gtcccaatgc gtaatccttg tagcctagtt
      961 ctttaacctt ggtttgagca agtgttttct ttttaacaga ttctaggtga atgatttttg
     1021 tagctgttct gctaagaaag tcttcatcgt gggaaacaaa tagaatggtt ttagggctcg
     1081 tgatgatata gttttcaagc caaagtaagg tatctaaatc taaatcatta gatggttcat
     1141 ctagaaaaat aatatcagat ggagttgcta gagatttgat taactgaatt tttaattttt
     1201 cgccacctga caggcttcca atcaattgtt gactggcaaa tcgctcgctg ttaaactgga
     1261 gctgctcagc atagagatag agtaggcggt aatcaatgtc actgtccata tctccgaaga
     1321 agtagtcgtt caaggttagc tctgccattt ccaatggaag accttgggga atgtagactg
     1381 gcgagtgaaa atatcggtga atgctgcctg atatgagtag gtagtcggcg ataagagttg
     1441 aatctatcaa ggttagtaat agactggatt ttccatttcc ttcttcgccg atgacagcta
     1501 ttttatcgcc agggttgaca ctgaggttta ggtcatgaac cagatttctc aaatcttttt
     1561 gatggtcgag gattaggtgt tgagtggcta gtagcataag gcctccttta caagaaaaaa
     1621 cacactacct atttagtagt gtgtcgaaat ctgctcaaaa agaccctatt caaggaatag
     1681 aggaaacaga aaaatggacg caagaaaact actaaataag cataaaactt agtttgagtt
     1741 tacttgttat tgtccatttc tccttacctc gcatacttta tttattttaa tatagcatat
     1801 cgatagaatc ttgtca
//
LOCUS       DBNFCX010000185         1800 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.187, whole genome shotgun sequence.
ACCESSION   DBNFCX010000185 DBNFCX010000000
VERSION     DBNFCX010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1800)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1800)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1800
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.187"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..1048
                     /locus_tag="AC1PJC_002245"
     CDS             <1..1048
                     /locus_tag="AC1PJC_002245"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF016357.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047355 - CDP-glycerol
                     glycerophosphotransferase activity [Evidence IEA];
                     GO_process: GO:0019350 - teichoic acid biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HIP6621202.1"
                     /translation="YACNPKYIAEYLNDKYKGKYELLFVLNNPEQISVPVGIKTIKNN
                     SLLFLFYRFTSKILISNMTDEVYLPKRKNQVFIQTWHAGGAYKKVGRSYEAKNSLATR
                     WQNRILSTETDYYLASSELFEKFNIREAYQYTGSVLPFGLPRNDLFFQPQKLDLIRKK
                     IVSQLNLKDAYIVLYAPTFRGDYADNIPLDFSLPIDNVIKILEDKVGCKVFVLNRAHY
                     NSKSRLYVSSKYQNQVLDVTDYPDMQELLAASDMLITDYSSSMWDFSLLKRPCILYVP
                     DLVSYDSDRGMYTPIEDWPGYIAQNPNELENILWNLDIQRVIEKATTHQERFGSFECG
                     KATEQLVNFILEQI"
     gene            1061..>1800
                     /locus_tag="AC1PJC_002246"
     CDS             1061..>1800
                     /locus_tag="AC1PJC_002246"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021616.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HIP6621203.1"
                     /translation="MIEKPLVSVIIPVYNVEDYLEACVASVQKQTLQDIEIILVDDGS
                     PDRSGQICDRLAAEDERIKVIHKENGGLSDARNVGVSQARADLIGFVDSDDTIEPTMY
                     EVLYDSLTRENADISFCGIWNIYPNLKVSINDLTEGYFVYSKLEVLKKVLVSDNATMH
                     SVTKLYKKNLLSETPFPVGKTYEDAHFIIGYLLKCEKAVFDLQPLYNYYRREGSITMT
                     PYKVSDLSIIEAHENNYKLLEKFIELRN"
BASE COUNT          611 a          241 c          344 g          604 t
ORIGIN      
        1 ttatgcatgt aatcctaaat acatcgcaga gtatctcaat gacaaatata aaggaaagta
       61 tgaactctta tttgtactta ataatcctga gcaaattagt gttcctgttg gtatcaaaac
      121 tattaaaaat aactcattat tatttttatt ttatcgtttt acctcaaaaa ttttgattag
      181 taatatgacc gatgaagttt acttaccaaa gagaaaaaat caggttttca tccagacttg
      241 gcatgctgga ggtgcttata aaaaagtagg tcgttcctat gaagctaaga atagtttggc
      301 tactcgatgg caaaatagaa ttctttcaac tgaaaccgat tattacttag caagttcaga
      361 gctgtttgaa aaatttaata tccgagaagc ctatcaatat accgggtcag tgttaccttt
      421 tggattacct cgaaatgatt tgttttttca gcctcaaaag ttagatttaa ttagaaagaa
      481 aatagtcagt caactgaatc ttaaagatgc atacattgtt ttatatgctc ctacttttag
      541 aggtgattac gcagataata tcccgcttga tttttcttta ccaattgata acgttataaa
      601 gatattagaa gataaagtag gttgtaaggt gtttgtgctg aacagagcac actataattc
      661 aaaaagtcgg ttatatgttt cgtcgaaata ccagaatcaa gttttagacg taacggatta
      721 tcccgatatg caagagttat tggctgcatc ggatatgttg attacagatt attcatcaag
      781 tatgtgggat ttttcattgt taaaacggcc ttgtatcctt tatgttcctg atttagtaag
      841 ctatgatagt gacaggggaa tgtatacacc tattgaagat tggccaggtt atattgccca
      901 aaatccaaat gagttagaaa atatactttg gaatttggat attcaaaggg taattgagaa
      961 agctactaca catcaagaaa gatttggttc ttttgaatgt ggtaaagcaa ctgaacaact
     1021 agttaacttt attttggaac aaatttagaa gaggtagata atgatagaaa aaccgttagt
     1081 atccgtaata atcccagtct ataatgttga ggattatcta gaagcatgtg ttgcttcggt
     1141 tcaaaaacaa acgctacaag atattgagat tattttagtt gatgacggtt cgcctgatcg
     1201 ttcggggcaa atttgtgata gattggctgc tgaagatgaa aggattaaag ttattcataa
     1261 agaaaatggc ggtctgagcg atgctagaaa tgttggagtt agtcaggcac gtgctgattt
     1321 gataggtttt gtagattcag atgatactat cgaaccaact atgtatgaag ttttgtatga
     1381 ttctcttact agagaaaatg cagatatttc attttgtggt atttggaata tttaccctaa
     1441 tttaaaagtg agtattaatg atttaactga gggttacttt gtatattcaa agttggaagt
     1501 tttaaaaaaa gtattagttt cagacaatgc aacaatgcat tcagtgacga aactttacaa
     1561 gaaaaatcta ctatcggaaa caccatttcc tgttgggaaa acatatgaag atgctcattt
     1621 cattattggt tacttattaa agtgtgagaa ggcagtcttt gacttacaac cgctttataa
     1681 ttattatcgt agagaagggt cgattacaat gactccttac aaagtatctg atttaagtat
     1741 tattgaggca catgaaaata attataagtt attagaaaag tttattgagt taagaaatga
//
LOCUS       DBNFCX010000186         1782 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.188, whole genome shotgun sequence.
ACCESSION   DBNFCX010000186 DBNFCX010000000
VERSION     DBNFCX010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1782)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1782)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.188"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..955
                     /locus_tag="AC1PJC_002247"
     CDS             <1..955
                     /locus_tag="AC1PJC_002247"
                     /inference="COORDINATES: protein motif:HMM:NF025654.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="O-antigen polysaccharide polymerase Wzy family
                     protein"
                     /protein_id="HIP6621204.1"
                     /translation="YIFLIIALIYQVRYVLNVGYLESYSSLEAGAGTPNFISRLSSFS
                     PFLFFIFLGTKPSKKEAFWPILLYFVYGISTLLTGQRFPVIAVTLVLMNYYVFRNREE
                     KWIEKWHITAILISIPLVLSGLFLMDYIRLSKVVESVNFLDSIFNFFAVQGGSINVIK
                     YAYLYQDSLAETPFYSFNSIRSNILNINEFSGNTIQHALYGSSMAHRMSYIIYGEYAY
                     IHGRGSGSSYIAELFHDFGYLGIAIGSMFYGYLIKKISLMKFNHFFKNAFQLAMLSPL
                     FLAPRGTFDSVIGQPFRRSNLFVLLMVFIVAKTLSDRNRKY"
     gene            968..>1782
                     /locus_tag="AC1PJC_002248"
     CDS             968..>1782
                     /locus_tag="AC1PJC_002248"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621205.1"
                     /translation="MRTKLALKNTIASLILQVITAISGLIIPRFFTTQYGSAVNGLVS
                     SISQFILYMGLVEAGISAAATVSLYKPLVEKRFSEISEVLSAAKLFYRRSGMMYLILL
                     AGLLIFYPKVVASKTINIPFIQMMIIVLAANSVIDYFFLGKYRVLLLADQRSYIISIA
                     QIIGVILTTISSIILIQIDANAIIVKAVAAIVYLLRTLYIIWFVKRNYKYLDLSMTPK
                     KEAFSQRKNVLLHQIAGMICNNTDIIVLTIFLGNRGLVLASIYSLYNLVAYAVT"
BASE COUNT          545 a          252 c          314 g          671 t
ORIGIN      
        1 gtacatattt ttgattattg ctctgatata tcaagttaga tatgttttga atgttggtta
       61 ccttgaatct tactcttccc tagaggctgg agcaggaacg ccaaatttta tttcgcgttt
      121 gtcatcattt tctccatttt tattttttat atttctaggg acaaaaccaa gtaaaaaaga
      181 ggctttttgg ccaattctac tgtattttgt ttatggcatt tctactttat taactggtca
      241 aagatttcca gttattgcgg tgactttggt tttgatgaat tattatgtat tccgaaatag
      301 agaggagaag tggattgaaa aatggcatat tacagcgatt ctaatctcta ttccattggt
      361 attatctggt ctttttttga tggattatat tcgactttct aaagttgtag aatctgtgaa
      421 tttccttgat tcaatcttta atttctttgc cgttcaggga ggttctatta atgtaataaa
      481 gtatgcttat ctttatcagg atagtcttgc agaaactcct ttctattcct ttaattctat
      541 taggagtaat atattaaata ttaatgagtt ttcaggtaat actatacaac atgcattata
      601 cggttcttca atggcacata gaatgtcata cataatatac ggcgagtacg cctacattca
      661 cggaagaggt tctggctcta gctatattgc cgaattgttc catgattttg gttatttagg
      721 aatcgctata ggaagcatgt tttacggata tctaataaaa aaaattagtt tgatgaaatt
      781 taatcatttc tttaaaaatg cattccaact tgcaatgtta tctccactat tcttggcacc
      841 cagaggcaca tttgatagtg ttattggtca gccattcaga cgttcaaatc tttttgtttt
      901 gctcatggtg tttatcgttg caaagacttt gtcagatcgt aatagaaaat actaggaatc
      961 attaaatatg cgtacaaaat tagctttaaa aaacacaata gccagtttaa ttctgcaagt
     1021 aattacagca atttctggat taattatccc aagatttttt acaacccaat atggttcagc
     1081 ggtaaatggt ttagtttctt caataagtca atttattcta tatatgggac tggtggaagc
     1141 cgggattagt gcagcagcta ctgttagtct ttataaacca cttgttgaaa agaggtttag
     1201 tgaaattagt gaagtgttgt cagcagcaaa gttattttat cgcaggtcag gaatgatgta
     1261 tttaattcta cttgctggtt tgttaatttt ttatcctaag gtggtagcca gtaaaacaat
     1321 caacatccca tttattcaaa tgatgataat tgtattggca gctaatagtg tgatagatta
     1381 tttttttctt ggtaagtata gggtactttt gctagcagat cagcgaagtt atataatttc
     1441 tattgcacag attattggtg taattttaac tacaatttct tcaattatat tgatacaaat
     1501 agatgcaaat gcaattattg ttaaagcagt agctgcaata gtttacttgt tgaggacatt
     1561 atatattata tggtttgtaa aaaggaatta taaatattta gatttatcaa tgactcctaa
     1621 aaaagaggcg ttttcacaac gaaaaaatgt tttactacat caaattgctg gaatgatttg
     1681 taataatacg gacattattg tgttaacaat atttcttggc aacagaggat tggttctcgc
     1741 tagtatatac agtttatata atctagtagc ctatgcagta ac
//
LOCUS       DBNFCX010000187         1780 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.189, whole genome shotgun sequence.
ACCESSION   DBNFCX010000187 DBNFCX010000000
VERSION     DBNFCX010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1780)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1780)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1780
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.189"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..329)
                     /locus_tag="AC1PJC_002249"
     CDS             complement(<1..329)
                     /locus_tag="AC1PJC_002249"
                     /inference="COORDINATES: protein motif:HMM:NF025461.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4274 domain-containing protein"
                     /protein_id="HIP6621206.1"
                     /translation="MEAIEIVKNLLETEDLDMLSKIISDVSSEEILYLFVCNFNYDGN
                     IDKLYYIINHSLCSRNIALKIFYLLDGYSFLLGDLDNFSDQSVPLLLDRIYTGLVSND
                     FSKGNIE"
     gene            complement(343..732)
                     /locus_tag="AC1PJC_002250"
     CDS             complement(343..732)
                     /locus_tag="AC1PJC_002250"
                     /inference="COORDINATES: protein motif:HMM:NF025769.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AHH domain-containing protein"
                     /protein_id="HIP6621207.1"
                     /translation="MLKSMGVSTNTGWKGYQAQHIIPAEFTNHPLIQKIGMNFDDASN
                     GIFLPIPNTNVRGLFRHRVYHSTYNTFVKTQLDAIDINQPSVVIQQQIMDLQSQLRTL
                     QQNGLPLYPIQGATVDLWQRSLNRIKK"
     gene            complement(842..1366)
                     /locus_tag="AC1PJC_002251"
     CDS             complement(842..1366)
                     /locus_tag="AC1PJC_002251"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621208.1"
                     /translation="MIGAPVAMAIGGAVSGAIMSGYDAYSSDQCVWGLVGSIAKGAGL
                     GAITGFVGGQFIGAGANVAANVSQNIANQTVRRVASAGVEAGVETVIDTGISVATGNP
                     ITIKNVVTDYGLNLVTNGSGSVSTKKSSPADVPKNKPRAGDVSIRKSPKDITPFQPGP
                     NQSRIPVEAVEGIW"
     gene            complement(1414..>1780)
                     /locus_tag="AC1PJC_002252"
     CDS             complement(1414..>1780)
                     /locus_tag="AC1PJC_002252"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621209.1"
                     /translation="KKHKLEVENGVYLEEICFQREDKVKFLGAIQIIDATSVTDVVNI
                     LLHRLNSHLLLLPSGEDVTEFLKHGFSRIISENNEYIKQIANRGGVVLFREGNFDDNH
                     TGFLGFGAIPLIDKDLFEV"
BASE COUNT          569 a          379 c          243 g          589 t
ORIGIN      
        1 atttcaatat tacctttact aaaatcatta gatactaaac cagtatatat cctatctaat
       61 agcaatggta ctgattgatc tgaaaaatta tccaaatctc ctaataagaa cgaataccca
      121 tctaataaat aaaatatctt tagagctata ttcctgctac acaatgagtg attgattata
      181 tagtacagtt tgtcaatatt accatcataa ttaaaattac atacaaataa atacaatatt
      241 tcttcacttg aaacatcact tataatttta gaaagcatat ccaaatcttc tgtttctaat
      301 aagttcttaa caatctcaat tgcttccatc atcctattcc tctcactttt ttattctatt
      361 taatgaacgt tgccataaat caactgttgc accttggata ggatataaag gcaatccatt
      421 ctgttgaaga gttcttaatt gactttgcaa atccattatt tgttgttgaa taacaactga
      481 tggttgatta atatcgattg catcaagctg agttttaaca aatgtattat atgtagagtg
      541 atacaccctg tgtctaaata aaccacgtac gttagtattt ggaataggta aaaaaattcc
      601 gttgctagca tcatcaaaat tcattcctat cttttgaata agaggatgat ttgtaaattc
      661 tgcaggaata atatgttgag cttgataccc tttccatcca gtattggtac ttacccccat
      721 tgattttaac atattcctac caagctgagt tgaattccca ccagtaacta tagcggttcc
      781 ttatactttt tggccgaaag ttacatcacg ggcaatcact ctagaaggat tctctataag
      841 ttcaccatat accttctaca gcttccactg gaattctaga ctgattaggt ccaggttgaa
      901 aaggtgttat atccttagga gatttcctta tggacacatc tcctgctctc ggcttgttct
      961 tcggtacatc tgctggagat gacttcttag tagaaacact acctgaacca tttgtaacaa
     1021 gattcaatcc ataatctgtc acgacatttt ttatcgtaat tggatttccc gtcgcaacag
     1081 atatacccgt atcaataaca gtctcaacac ctgcttcaac tcctgcactg gcaactcgac
     1141 gtactgtctg attggcaatg ttttgtgaca cattagctgc tacattggca ccagctccaa
     1201 taaattgacc acctacaaaa cctgtaatag ctcctagtcc tgctcctttg gcaatagaac
     1261 caaccaagcc ccaaacacat tgatctgagc tataggcgtc gtagccagac ataatggctc
     1321 cagaaaccgc accaccaatc gccattgcga ctggggcacc tatcaattga ttataacatt
     1381 ttagagaagt tcagatttcc caatacctta attctacacc tcaaacaaat ctttatctat
     1441 tagtggaata gcaccaaatc ctagaaaacc agtgtggtta tcatcaaagt ttccttccct
     1501 aaataatact actcctcctc tatttgctat ttgtttaata tattcattgt tttcagaaat
     1561 aattcttgaa aaaccatgct tcaaaaactc tgtaacatcc tctcctgaag gtaataatag
     1621 tagatgagaa tttaacctat gaagtaaaat attaacaaca tcggtgactg aagtagcatc
     1681 tataatttgg atagctccta aaaacttaac tttatcttct ctttgaaagc aaatctcttc
     1741 tagatatacc ccattttcca cctctaattt atgcttcttt
//
LOCUS       DBNFCX010000188         1776 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.190, whole genome shotgun sequence.
ACCESSION   DBNFCX010000188 DBNFCX010000000
VERSION     DBNFCX010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1776)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1776)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1776
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.190"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(17..427)
                     /gene="nmlR"
                     /locus_tag="AC1PJC_002253"
     CDS             complement(17..427)
                     /gene="nmlR"
                     /locus_tag="AC1PJC_002253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="stress response transcriptional regulator NmlR"
                     /protein_id="HIP6621210.1"
                     /translation="MNIKEVSDVIGLSADTIRYYERIGLIPKIARKSSGVRNFSESDV
                     AILEFIRCFRSAGMSIERLIEYMGLVQAGDSTVEARIDLLKEEREVLQSRLSEIQQAL
                     DRLDYKIENYQTILRGAENQLFTDGGSSFKKGRG"
     gene            complement(527..991)
                     /locus_tag="AC1PJC_002254"
     CDS             complement(527..991)
                     /locus_tag="AC1PJC_002254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003104139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HIP6621211.1"
                     /translation="MSYTVNFKEVETTGLETSPVAEVLAGLRANEARYFWNKYKQEFV
                     VYTSEEKPEILPFIEKVLAERDMVFPYSPLNVAQLEVDGILWSFVFYDNGLAVNVLYT
                     LEEGGKRAVGFKLSDGIEIPKEFEGKFKFARQRSKLAGEIRGTFFVIKGEYL"
     gene            complement(1053..>1776)
                     /locus_tag="AC1PJC_002255"
     CDS             complement(1053..>1776)
                     /locus_tag="AC1PJC_002255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621212.1"
                     /translation="TKVSSFLNIVLLGLPFLMNIQLVIIILLLSFSKLYFGYKVLLII
                     VFVIVFLYFLAASTKAFLKDKLEFRISTQLLLFAGISCVFLIPTYLSFQLKDEGVAAL
                     TWFVPLLTPMLFDLGIFGNNVVLEESYFPTEKFHYLRTMLTIFLSEYVFNLQMFWQLS
                     YQKQEFFKMLPYIKEYDETWWSYTTYIALPSLVLALILTILLDIIFQSLVSNKANGLV
                     MTKRPLTQKLIRRQFKYKRLKK"
BASE COUNT          571 a          360 c          296 g          549 t
ORIGIN      
        1 tataaaggca gagaagttat cctctgcctt ttttgaatga actaccgccg tctgtgaaca
       61 attgattctc tgcacctctt aatatagtct ggtaattttc tattttataa tctaaacgat
      121 ctagagcttg ctgaatttcc gacaagcgtg actgcaggac ttcccgttcc tcttttagta
      181 aatcaatccg agcttccact gtactatctc ctgcctgcac caagcccata tactcaatca
      241 agcgctcaat agacatacca gcactcctaa aacagcggat aaattccaaa atggctacat
      301 cactttccga aaagttcctt actccagaag attttcttgc aattttggga ataagtccta
      361 tccgctcata gtagcgaatg gtatctgctg atagacctat tacatcacta acttctttga
      421 tattcatttc aggctccttt ctttgttttc gcttattata caccttgaag tccactccag
      481 gtcaagtcat tatttaaaaa atctgggttt ccccagattt gccatcctat aaatactcgc
      541 ccttgataac aaagaaggtg ccacgaattt cgccagctag tttggagcgt tggcgggcaa
      601 acttgaattt gccttcaaat tctttgggaa tttcaatgcc gtctgacaat ttgaatccga
      661 cagctcgttt gcctccttct tcaagcgtat agaggacatt gacagccagg ccattgtcat
      721 aaaagacaaa tgaccagaga atgccatcta cctcaagctg agcgacattg agcggactgt
      781 aaggaaaaac catgtcccgc tctgccaaga ccttctcgat gaagggcagg atttcaggct
      841 tctcttctga tgtatagacc acgaactcct gcttgtattt gttccagaaa tagcgggctt
      901 cattggcacg cagacctgcc aagacttctg cgactggact agtttctaaa cctgtcgttt
      961 cgacttcttt gaaatttact gtataagaca tgattttcct ttctgcttgt ctagtaataa
     1021 gataccggta ttataccacg ctagctctaa aattactttt tcagacgttt atatttgaat
     1081 tgacgacgta taagtttttg ggtcagtgga cgctttgtca tgactaatcc gttagcttta
     1141 tttgatacta gggattggaa aattatatct aacaagattg tcaaaatcaa agctagtaca
     1201 agtgagggca atgcaatata agtagtatac gaccaccatg tttcatcata ttctttaata
     1261 tagggtagca ttttaaaaaa ctcctgcttt tgatatgata attgccaaaa catttgtaag
     1321 ttgaagacat actctgataa aaaaattgtc aacattgttc ttaaataatg aaatttttca
     1381 gtgggaaaat aactttcttc taataccacg ttatttccaa aaatacctaa atcaaataac
     1441 atcggagtaa gcagagggac aaaccatgtt aaagcagcaa ctccctcatc ctttaattga
     1501 aatgagagat aggtaggaat taagaaaaca caggaaattc ctgcaaacag taatagctgt
     1561 gtagatatcc taaattcaag tttatctttt aagaaagcct ttgtagatgc tgctaaaaaa
     1621 taaagaaaaa caataacaaa aactattatc agtaatactt tatatccaaa atataattta
     1681 gaaaaagata ataatagaat aattataaca agctgtatat tcatcaagaa aggaagcccc
     1741 aataatacta tattgagaaa actacttact ttagtt
//
LOCUS       DBNFCX010000189         1727 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.191, whole genome shotgun sequence.
ACCESSION   DBNFCX010000189 DBNFCX010000000
VERSION     DBNFCX010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1727)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1727)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1727
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.191"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(105..884)
                     /locus_tag="AC1PJC_002256"
     CDS             complement(105..884)
                     /locus_tag="AC1PJC_002256"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like serine peptidase"
                     /protein_id="HIP6621213.1"
                     /translation="MKTKLLLGVALLSVGLSVAPPTIVEVEAQTTHVSDPALRNSYPY
                     NLSHYLEVNVGSGQTKKGSAILIAPNTLLTAAHVVADDGTGRVTSQTWSGNAVWGDAS
                     PYYELSEIKRTNTFNPFIPMPGYGGTWDASRDVALVKITTPSRKTQTANTANARLGIY
                     RNTYDLVGRQFLMVSNSINLYGRWEYEYGTITEVRYDGLLQTNITGVKGQSGSPVVVD
                     GRIIGVVSNIDSNSKIVITPLTMEMKTQLFDKNGIKNIDIY"
     gene            complement(1061..1707)
                     /locus_tag="AC1PJC_002257"
                     /pseudo
     CDS             complement(1061..1707)
                     /locus_tag="AC1PJC_002257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775244.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
BASE COUNT          497 a          382 c          333 g          515 t
ORIGIN      
        1 acactgacct ataattttta tttatgtgcg aaaaatgtgt taagattgca atgaaaagcc
       61 ctgccttatc agtaaagcag gactttgatg gctcaagaat atcgctagta aatatcaata
      121 tttttgatac cattcttatc aaataattgt gttttcatct ccatagtcaa cggagtaata
      181 acgatttttg aattagaatc aatattagat acgacaccga taatgcgacc gtctacaaca
      241 acaggtgagc cggattgccc cttaacacct gtgatattgg tttgaagcaa accgtcataa
      301 cggacttccg taatggttcc atattcgtat tcccaacgtc cgtagagatt aatgctgttg
      361 ctgaccatta gaaattgtcg gccaactagg tcataggtgt tacggtaaat tcctagccga
      421 gcatttgccg tattggctgt ctgtgttttt ctgctagggg tggtgatttt cacaagggct
      481 acgtcacgac tagcatccca tgttccacca tatcctggca tcggaatgaa gggattgaag
      541 gtattggttc tcttaatttc tgacagttca tagtatggtg aagcatcgcc ccaaacagca
      601 tttccagacc aagtttggct ggttacacgt ccagtcccat catctgccac tacgtgagct
      661 gcggttaata aagtattcgg agctattaga atggctgaac cttttttggt ttgaccggaa
      721 ccaacattta cttccaaata atgagataaa ttatatggat aactattgcg tagagctgga
      781 tctgaaacgt gagtcgtctg tgcttcaacc tctactattg taggaggagc caccgataga
      841 ccgacactaa gaagggctac gccaagcagt aatttcgttt tcatttgaaa acctcctgtt
      901 ttttctttca ttatatcaat cctaattaca aaatgcaagc gtttccaagt gtttttgttc
      961 aacaatttag gctcttctca tccattgaca atagctcaaa aacaggacta gtacctatct
     1021 aactagccct gttaaaatac tttctgtcag aagtatttgc ctaccacttt atcgataaat
     1081 tcgctaggta atctgaggca aattgagtca agcgattgcg actgtctttg gattcataaa
     1141 aatcaatcat ggcaaaacca gctcgtaatt gcccagcaat ctgttcttct aaggtgtggc
     1201 taaattcata gccatattct gggtcaatcg taatttgtcc tgcttcttct aattgtcgtg
     1261 cattgaaagg taggctgtac attggaacca atgctctgtc tggatgctcc caaacatcat
     1321 cagcatcaaa gatataaatc caagggttca tgtaaccaac catgagcaag ccaccttttt
     1381 tcaagacccg ataggattcc cgccacatag tttctaagtc ttcgatataa acatttgaaa
     1441 cagggcaaaa aatgatgtca aaactctcgt cttcaaaagg aaagacttgt gtcatatccg
     1501 cctggaccgt ttgcaaatcc agattttctc gctccgcaac caagcgatcc ttgtccaact
     1561 gttccttgga gaagtccata atggtcgttt gtaaccgtga gccgcaaaga ttggtccctg
     1621 ttgaccacca ccgcaggcta aacccagcaa tttcttacct tgggcttttt caaaccagtc
     1681 atttccaacc gtcaaaaaaa cgcgaatggg aaagaactcg actggtc
//
LOCUS       DBNFCX010000190         1696 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.192, whole genome shotgun sequence.
ACCESSION   DBNFCX010000190 DBNFCX010000000
VERSION     DBNFCX010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1696)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1696)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1696
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.192"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..186
                     /locus_tag="AC1PJC_002258"
     CDS             <1..186
                     /locus_tag="AC1PJC_002258"
                     /inference="COORDINATES: protein motif:HMM:NF016932.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HIP6621214.1"
                     /translation="FLWNIDDIRFDDRTITCLMALPISEKELEYLRNNGSDLLEQLFK
                     EQQIDFYDLNRPDVVFR"
     gene            199..687
                     /locus_tag="AC1PJC_002259"
     CDS             199..687
                     /locus_tag="AC1PJC_002259"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621215.1"
                     /translation="MDNKILLKAIFDGLSNVPQKPNLEVLYCSKSEGEQRLASVEWEN
                     IGVEQTNDFLFKDGKINQNNCGAKWNTGTKLFREELEPQIIQFFSRYSFTDESIDAIN
                     FDLSALINYKSLQREFDFESIFYDQMFELYTSGYIPVGYEGDYPNGTFYVMNPQSEPS
                     EE"
     gene            871..1689
                     /locus_tag="AC1PJC_002260"
     CDS             871..1689
                     /locus_tag="AC1PJC_002260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621216.1"
                     /translation="MAIGGAASGAIMSGYDAYSSGQRGWGLVGSIAKGAGLGAITGFV
                     GGQFIGAGANVVANVTQNITNQTVRHVVSAGVEAGVETAIDTGISVVTRSPISLKNVA
                     TDYGLNLITNGSGSVSSKKGAKSSKPKAKPKAKPKADIVNPYTGVREASQYLQEQGVP
                     REYRKQILESFEIRTINVNQADSNTFGLRFYGGNANQEGRYLFETFTDLTNRKNLALP
                     PSWNTMEGIAQFKLKEGTTYISGRVAPQLSMGPEYVGGATQWYVNDLTKLERLK"
BASE COUNT          529 a          248 c          387 g          532 t
ORIGIN      
        1 ttcttgtgga atattgatga tattcgattt gatgatagga ctattacatg cctcatggcg
       61 ttaccaatat cagaaaagga gttagaatac ttgcgtaata atggtagtga tctgttagaa
      121 caattgttta aagagcagca aattgatttc tatgatttga atagaccaga tgttgttttt
      181 aggtaaggag attaattagt ggataataaa attttactta aagctatttt tgatggactt
      241 tcaaatgtac cccagaagcc caatttggag gtgctctatt gttctaaaag tgaaggagaa
      301 caaaggctag cttctgtaga gtgggagaat atcggggttg agcagacaaa tgattttctt
      361 ttcaaagatg gtaaaattaa tcaaaataat tgtggagcga agtggaacac cggtactaaa
      421 ttatttagag aagaattgga acctcaaatt attcaatttt ttagcaggta ttcctttaca
      481 gatgaaagta ttgatgctat aaattttgat ttaagtgcat taattaatta taaatcgctt
      541 caaagagagt ttgattttga atcaatattt tatgatcaaa tgtttgaact atatacttct
      601 ggatacatcc ctgtaggcta cgagggtgat tatccgaatg gtacttttta tgtaatgaac
      661 ccacaatcgg agccatctga ggaatagttt tagcatcttt tgaaatcatc tagacttttc
      721 taggtgattt ctttttggtg tggtagaata gatgtgtaga tctttgagaa cagaatatca
      781 ggtggaaact gtctagatag ctctgctggt gctattggtg ttggtatcgc ccttaccgta
      841 actaccggag gtctaggtgc tccagtcgca atggctattg gtggtgcggc ttctggagcc
      901 attatgtctg gctatgatgc ctatagctca gggcaacgtg gttggggctt ggttggctct
      961 attgccaaag gagcaggact aggagctatt acaggttttg ttggtggtca gtttattgga
     1021 gctggtgcca atgtggtcgc taatgtgacc caaaatatta ccaatcagac tgttcgtcat
     1081 gtcgttagtg caggtgttga agctggtgtt gagacagcta tagatacggg aatctccgtt
     1141 gtgacaagga gtccaatttc tcttaagaat gtcgcaacag actatggtct taatctcatt
     1201 accaatggtt ctggtagtgt ttctagtaag aagggtgcga agtcctccaa acctaaggct
     1261 aaaccgaaag ctaaaccgaa agctgatata gtaaatccat acacgggagt gcgggaagca
     1321 tctcaatatc ttcaagaaca aggagtacct agggagtata gaaaacaaat attagagtca
     1381 tttgaaataa gaactataaa tgtcaatcag gcagattcta atacatttgg tctaagattt
     1441 tatgggggaa atgcaaatca ggagggaaga tatttatttg aaacctttac tgatttgact
     1501 aatcgaaaaa atttagcatt gccaccctct tggaatacaa tggaaggtat tgctcaattt
     1561 aaattaaaag agggtactac ttatatctca ggaagagtag ctccacaatt atctatgggt
     1621 ccagaatatg taggaggtgc cactcaatgg tatgtaaatg atttaacaaa attagaaagg
     1681 ctaaagtaat gatatt
//
LOCUS       DBNFCX010000191         1602 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.193, whole genome shotgun sequence.
ACCESSION   DBNFCX010000191 DBNFCX010000000
VERSION     DBNFCX010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1602)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1602)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.193"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            29..1576
                     /locus_tag="AC1PJC_002261"
     CDS             29..1576
                     /locus_tag="AC1PJC_002261"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006151093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HIP6621217.1"
                     /translation="MPYAIDLFSGAGGFSEGILQAGFDILFSSDRSPMVQETYVNRHQ
                     QLGLEEGVDTHFELADIKDLTSERIFEVINNLRYGNIFEPGDIDVIFGGPPCQGFSRL
                     GKRDASDPRNMLFHEYLRIIRDVRPRYVVMENVTGILDMLMLDFPSVVKDESYLGQNL
                     VKDILEKELQELGYVLLDVQVLNAANFGVPQQRNRVVFLAYRNDVNPIEYPEPDVLPE
                     VTVREALNGLYNTDQDDISEYAQNRIQGETPTVAGENIPREQITNTEESRHDILVSQR
                     FSLYQPGENTRAVINRLKAEGLNLRDTRPELFNESLFQVNLSINSEVIHETLIELNLF
                     DNKFLTSRWLHFTNRQLATLSSLINNEQEFTITLKSLASRLNTTLEQASTFWETVQPL
                     LNREYDADTFHRLLMNGEITDKIGEAILTKKSIRTRLNPDSISPTIVTLPDDFIHPYF
                     DRVLTVREMARMQSFDDSFEFLGKRTTGGDKRSQETPQFTQVGNAVPPLLARAVALKV
                     REAIEAN"
BASE COUNT          560 a          288 c          297 g          457 t
ORIGIN      
        1 tattagaaag aaagcgagaa gtttaaaaat gccatatgca attgatttat tcagtggtgc
       61 tggaggtttt agtgaaggaa tcttacaagc tggattcgat atactttttt ctagcgatag
      121 aagcccaatg gtgcaagaaa cctacgttaa tagacaccaa caacttggtc tcgaagaagg
      181 agttgatacc cactttgaac tagcagatat caaagattta acttctgaac gtatttttga
      241 agtgataaat aacttaagat acggaaatat ttttgaaccc ggtgatatag atgtcatttt
      301 cggaggacca ccttgtcaag gatttagtcg ccttggaaaa cgagatgcta gcgatcccag
      361 aaatatgctt ttccatgaat acttacgaat tattcgggat gtgcgtccaa gatatgtcgt
      421 tatggagaat gttaccggta ttctagacat gcttatgctt gattttccta gcgtggttaa
      481 agatgaatca tatttaggac aaaatttagt aaaagatatc cttgaaaaag aactacaaga
      541 acttggatac gttctacttg atgttcaagt attaaatgca gccaatttcg gagttccaca
      601 acagagaaat cgagttgtct ttttagcata cagaaatgat gttaatccta ttgaatatcc
      661 tgaaccagat gttctccccg aagtaacagt aagagaagct ttaaatggtt tatataatac
      721 agaccaggat gatatatccg aatatgctca aaataggata caaggtgaga cacctacggt
      781 agcaggagaa aatataccac gagaacaaat tacaaacacg gaagaatcca gacacgatat
      841 acttgtttct caaagattct ctttatatca accgggagaa aacacccgtg ctgtgattaa
      901 tcgacttaaa gcagaaggcc taaatctccg tgatactcgc ccagaattat ttaacgaaag
      961 tctatttcaa gtaaacctat ctattaattc tgaagtcata cacgaaacac ttatagaact
     1021 taaccttttc gataataagt tcctgaccag ccgttggttg cattttacca atcgtcaatt
     1081 ggctacacta tctagtctaa taaataatga acaagaattt accattactc ttaaatcact
     1141 tgctagtagg ctaaatacca ctctagaaca ggctagcact ttctgggaaa cagtacagcc
     1201 attgctaaat agagaatacg atgcagatac tttccatcgc ttacttatga atggagaaat
     1261 tactgataaa atcggagagg cgattctaac aaaaaaatca atacgtacca gacttaatcc
     1321 cgattctata tctccaacta tagtcacttt accagatgac tttattcatc catattttga
     1381 tagagtgctt actgtacgag aaatggctag aatgcaatcg tttgatgata gttttgagtt
     1441 cttaggtaag aggacaacag gtggggataa acgatctcaa gaaacacctc aattcacaca
     1501 agtagggaat gctgtccctc ctttactagc tagagcagta gccttaaaag ttagagaagc
     1561 aatagaagct aattaattca ctatgaaaca taaaaagact ag
//
LOCUS       DBNFCX010000192         1556 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.194, whole genome shotgun sequence.
ACCESSION   DBNFCX010000192 DBNFCX010000000
VERSION     DBNFCX010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1556)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1556)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1556
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.194"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..867
                     /locus_tag="AC1PJC_002262"
     CDS             <1..867
                     /locus_tag="AC1PJC_002262"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621218.1"
                     /translation="PGSQTDPLSQNLYAYVQNNPANYTDPSGHIWKTLTNAYNTAKKA
                     VSKAYNAAKKVVVDTYNTVKKAVVNTYNTIKSAVGHAVNWVGQKVNQAVNWAGNAVRQ
                     TTNWIGQQFTSQRGYNNSTRNYVTYQQSEAQRQAIAQQQYQQRVNQEYITATGIKGQP
                     KTREAQNLFKNWGPALREMYTHVCNPQTTKGKDSGSRNKPTISVADFRKIEEANKYGL
                     TVAEKERIDKMTLDQYLQSPQMTAEEILYARQVKFASYTEARKDVFPTFVAELSGWNF
                     QSPMVNQRYLEY"
     gene            919..1329
                     /locus_tag="AC1PJC_002263"
     CDS             919..1329
                     /locus_tag="AC1PJC_002263"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621219.1"
                     /translation="MKVIKLPIYYKNNKKTKECRLSLIDNEELCVIEISLGSQSVKYE
                     AESFFQALIALRLDLENDGGIIQCNGSDRQIFPSPLQMAMGGEKAYLLEIGKQARIQN
                     VYDIFEMNKPDLDCVTVLEQEEFYNQWFKSLGGQ"
BASE COUNT          540 a          271 c          341 g          404 t
ORIGIN      
        1 ccaggtagtc aaacagaccc gctcagtcaa aacctctatg cctatgtgca gaacaaccca
       61 gccaactaca ccgacccgag tgggcatatc tggaagactt tgacaaatgc atataatact
      121 gctaagaaag cagtgtccaa ggcctataac gccgctaaga aagtagttgt cgatacctat
      181 aatactgtca aaaaagcagt ggtaaacacc tataacacca ttaagagcgc agtcggtcac
      241 gcagtcaact gggtcggaca aaaggtcaat caggcagtca actgggctgg caatgcggta
      301 aggcagacta ctaattggat tggtcagcaa ttcacctctc agcgaggcta caataatagc
      361 actcgaaact atgtgaccta ccagcaatct gaagcacagc gtcaagccat cgctcagcaa
      421 cagtatcagc agcgggtgaa tcaagaatac attacagcga caggtataaa aggacagccc
      481 aaaacaagag aagcccaaaa cctctttaaa aattggggac cagctttgag agaaatgtat
      541 acgcacgtat gtaatcctca gactacgaaa ggtaaggatt caggttctcg aaacaagcca
      601 actatcagcg ttgcggattt ccgcaaaatt gaagaagcca ataagtatgg attgacagtg
      661 gctgaaaaag agcgcattga taaaatgaca ctggatcagt atcttcaatc tccgcaaatg
      721 acagcggaag aaatattgta tgctcgtcag gttaaatttg cttcctatac agaagcaaga
      781 aaagacgtat ttccaacgtt tgttgcagag ttaagcggat ggaattttca atcccctatg
      841 gtaaatcaaa ggtacctgga gtattaataa aggggttgtt ggtggctata tttcgaatcc
      901 aaattttgga ggtggaagat gaaagtaatt aaattgccaa tatattataa aaataataag
      961 aagactaaag aatgtcgact tagtctcatc gataatgaag agttatgtgt tattgagata
     1021 tcattgggtt ctcaatcagt caagtatgag gcggaatcat tttttcaggc attaatagca
     1081 ctcagattag atctggaaaa tgatggtgga ataatacaat gtaacggttc agatagacag
     1141 atattcccat caccattaca aatggctatg ggaggggaga aggcttattt gttagaaata
     1201 ggaaagcaag caagaattca gaatgtgtat gatatctttg agatgaataa accggacttg
     1261 gattgtgtga cagttcttga acaggaggaa ttctataatc aatggttcaa gagtttagga
     1321 gggcagtaat tttggataaa atattatttt acaaagtaaa ggattctttt ggtgaattct
     1381 caaatttttc aaattttggt ttttagatga tgccggatta tattggccaa caagtgaaca
     1441 gtattttcaa gctcaaaagt ttgcttcgaa agttttaaga gaaaaaatca gactgtatca
     1501 ttcacctatg gatgctgcaa ttgagggacg taatcgtaac taactattat attgat
//
LOCUS       DBNFCX010000193         1537 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.195, whole genome shotgun sequence.
ACCESSION   DBNFCX010000193 DBNFCX010000000
VERSION     DBNFCX010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1537)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1537)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1537
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.195"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            28..975
                     /locus_tag="AC1PJC_002264"
     CDS             28..975
                     /locus_tag="AC1PJC_002264"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621220.1"
                     /translation="MIFTIDRLQFINNKLIAFEFFNIDIEKCNEQFINDKVKVLRSLV
                     GTKIDSFYYIKYKDDYSYFEIENAEQIAKFSYEEFSRWFRELNGQVTTNRSSSKPAGS
                     VRGENIDVYVAELLNTYYQLHYSGIDFFVDDNGLKLVKTILNEHNESTFGFDFDLYCS
                     MTGTIFEFLKRDNEYVTNLTAHPARYFWNKQKFVSLWKATKRIDSENKLVLVNYSDNI
                     LEPVGLIVIQDFDITSNLKMSLNDIGYNIGGKSNIIKLLESLENGKHEANEFLKKMPK
                     EVRNHAFFNEVYDEVYFKNIQEKKGKGRWNCSKIGKNYI"
     gene            complement(1020..>1537)
                     /locus_tag="AC1PJC_002265"
     CDS             complement(1020..>1537)
                     /locus_tag="AC1PJC_002265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003105126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009007 - site-specific
                     DNA-methyltransferase (adenine-specific) activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HIP6621221.1"
                     /translation="APLIFYILIVYGFNNQIRFNSKGDYNMPTGKRDFNQKMELKLES
                     FMEALHQRDITYSSSDFKDFLSQQNFQENDFVYLDPPYLISTASYNENGGWDEKSELE
                     LLNSLNILDSKGVKFALSNVLIHKGKENNILGEWAKKYNIHYLNFNYNNSNYQSKAKS
                     NNTIEVLITNY"
BASE COUNT          567 a          181 c          263 g          526 t
ORIGIN      
        1 aagatattct aaataggaga tagaaaaatg atttttacta ttgatagact acaatttata
       61 aataataaac taattgcttt tgagtttttt aatattgata ttgaaaagtg taatgagcag
      121 tttattaatg acaaagttaa agttttaagg agtttagttg gtacaaaaat tgatagcttt
      181 tattatatca agtataaaga tgactactca tattttgaga tagaaaatgc agagcagata
      241 gccaaattta gttatgaaga gttcagccga tggtttagag agttgaatgg tcaggtaaca
      301 actaataggt ctagctcaaa accagcgggt tccgttagag gcgaaaatat agatgtatat
      361 gtagccgaac ttcttaatac atattaccaa ctgcattata gtggtattga ttttttcgtt
      421 gatgataatg gattaaaatt agtaaaaaca attttaaatg aacataatga atcaactttt
      481 ggatttgatt ttgacctata ttgtagcatg acaggaacaa tttttgaatt tttaaagaga
      541 gataatgagt atgtcactaa cttgactgcc cacccagcac gatatttttg gaataaacaa
      601 aaatttgtat cactttggaa agccacaaaa agaatagact ctgaaaataa attagttcta
      661 gttaattata gtgataatat attagaacct gttggtttga tagtgattca agactttgac
      721 attactagta atttaaagat gagtcttaat gacattggct acaatattgg aggaaaatca
      781 aatataatta aactattgga gtcgctagaa aatggaaaac atgaggcaaa cgaatttttg
      841 aaaaaaatgc caaaagaagt tagaaatcat gcatttttca atgaagttta tgatgaagtt
      901 tatttcaaaa atattcagga aaaaaaaggc aaagggagat ggaattgtag caagataggt
      961 aagaactata tttaaagaag cgtcaaagaa aaagcctgtg tcctctaaca caagcttttt
     1021 tagtagtttg ttatcaaaac ctcaatagta ttatttgatt ttgcttttga ttgataattt
     1081 gagttattat agttgaaatt gagatagtgg atattatatt tttttgccca ttctccaagg
     1141 atattatttt cttttccttt atgaattaga acattagata atgcaaattt cacacctttt
     1201 gaatctaaaa tatttaaaga attaagtagt tctagttcag acttctcgtc ccatccacca
     1261 ttttcattgt aagaagcagt tgatataagg taaggcgggt ctaaataaac aaaatcattt
     1321 tcttggaaat tctgctgact taaaaaatct ttgaagtctg aagatgagta tgtgatatct
     1381 cgttgatgca aagcttccat gaaggattca agttttaatt ccattttttg attaaaatct
     1441 ctttttcccg taggcatgtt gtagtcaccc ttactattaa atcttatttg attattaaag
     1501 ccatatacaa taagaatata gaagattaaa ggcgcaa
//
LOCUS       DBNFCX010000194         1531 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.196, whole genome shotgun sequence.
ACCESSION   DBNFCX010000194 DBNFCX010000000
VERSION     DBNFCX010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1531)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1531)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1531
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.196"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..975
                     /locus_tag="AC1PJC_002266"
     CDS             <1..975
                     /locus_tag="AC1PJC_002266"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HIP6621222.1"
                     /translation="SNGGLTGAGGTTTHLSEVKPTGTITIENRNDAQGTFDVRVTNVS
                     SPKDIASVLLPTWSQSDDIRWYEATRQSDGSYKLTVNKKDHKYRTGTYTVHLYYKDSS
                     GGLTGAGGTTTHLSTPSVQRSYTVYIDPGHGGRDSGASYGGVHEKNLALSVSNKLREN
                     LLQYGINVLMTRTGDYDVDFKTERSRMTNASNADLFISIHFNATGAGVSNATGIETYW
                     YQYDPEYQPKINKEMHNNPTRLAESEILANKVQESLIKETGAVNRGVRRETFAVLRET
                     AIPAILVELGFMDNPSELQVIKQDSYHTRLAKALAQGVMNWYGAVEGK"
     gene            1044..1481
                     /locus_tag="AC1PJC_002267"
     CDS             1044..1481
                     /locus_tag="AC1PJC_002267"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013954.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 73 protein"
                     /protein_id="HIP6621223.1"
                     /translation="MPAIEQNSKVNSVLSSVMLSQAILESAWGTSYLATHGNNLFGIK
                     ADAAWTGDTIEIITNEYRDGEKKQEKHLFRKYNSWNESVADYAKFFTSTPWRIKNYQS
                     FREATDYQQAILALRQSGYATDPKYGEKLRSIIENYKLYLLDN"
BASE COUNT          507 a          275 c          337 g          412 t
ORIGIN      
        1 tcaaatggtg gcctaacagg tgcaggtgga acaacgactc atttatcaga agtgaagccg
       61 acaggtacca tcacaattga aaatcgtaac gatgctcaag gcaccttcga tgttcgtgtt
      121 actaatgttt catcaccgaa agatatagca agtgttctct tacctacctg gtcccagtca
      181 gacgatatac gttggtatga agctactcga caatcagatg gtagttataa gttaactgtt
      241 aataagaagg accataagta ccgtacaggt acctacacgg ttcacttata ttataaggac
      301 tcaagtggtg gcctaacagg tgctggcggt acaacgactc atttatcaac cccgtcggta
      361 cagcgctcct acacagtcta tattgaccca ggacatggag ggcgagactc aggagcttct
      421 tatggaggtg tacatgaaaa aaatcttgca ttgtctgttt caaataagtt gcgtgaaaat
      481 ctcttgcaat atggaatcaa tgttttgatg acccgtacag gtgattatga tgtagacttc
      541 aaaacagaga ggtcacgaat gacgaatgca agcaacgcag acttatttat tagtatccat
      601 tttaatgcga cgggagcagg agtttcgaat gcgactggta tcgaaacata ctggtatcaa
      661 tacgatccgg aataccaacc taaaattaat aaagaaatgc ataataaccc tactcgttta
      721 gctgaaagtg agattttagc caacaaggtt caggagagtt taattaaaga aacaggtgca
      781 gttaaccgtg gcgtaagaag agaaactttt gcagtccttc gcgagacagc aattcctgcc
      841 attctagtgg agctaggatt tatggataat ccttcggaat tacaagttat caaacaagat
      901 tcttatcata ctcgccttgc gaaagcattg gcacaaggtg tgatgaactg gtatggtgct
      961 gtagagggaa agtagggact gcaggtacag gtattgaaac aggaaaactt tctaatgatc
     1021 aaaaaagttt catagctaat ctagtgcctg caattgagca aaattcaaaa gtgaattctg
     1081 tcctttcgag tgtcatgtta tctcaagcca tcttagaaag tgcatgggga acgtcatact
     1141 tggcaactca tgggaataat ctttttggca tcaaagcgga tgctgcatgg acgggtgata
     1201 caattgaaat cattaccaat gaataccgtg atggtgagaa gaagcaagaa aagcacttgt
     1261 ttagaaaata taattcatgg aatgaaagtg tagcagacta tgctaagttc tttacctcta
     1321 ctccatggag aataaaaaat taccagagtt ttagggaggc aactgattat caacaagcaa
     1381 ttcttgcgtt aagacaatca ggatatgcta ctgacccgaa atatggtgaa aaattacgat
     1441 caattatcga gaattacaag ctttatcttt tagataatta agtttttgga tgattgatga
     1501 taaaatagcc ttgctcaaaa acgagcaagg c
//
LOCUS       DBNFCX010000195         1522 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.197, whole genome shotgun sequence.
ACCESSION   DBNFCX010000195 DBNFCX010000000
VERSION     DBNFCX010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1522)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.197"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            4..89
                     /locus_tag="AC1PJC_002268"
     tRNA            4..89
                     /locus_tag="AC1PJC_002268"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:38..40,aa:Leu,seq:aag)
     gene            324..1205
                     /locus_tag="AC1PJC_002269"
     CDS             324..1205
                     /locus_tag="AC1PJC_002269"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011184946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HIP6621224.1"
                     /translation="MPLVSAEKFVQAARDNGYAVGGFNTNNLEWTQAILRAAEAKQAP
                     VLIQTSMGAAKYMGGYKVARNLIANLIESMNITVPVAIHLDHGHYEDALECIEVGYTS
                     IMFDGSHLPVEENLAKAKEVVELAHAKGISVEAEVGTIGGEEDGIVGTGELAPIEDAV
                     AMVATGIDFLAAGIGNIHGPYPANWEGLDLDHLRKLTEAVPGFPIVLHGGSGIPDAQI
                     QEAIKLGVAKVNVNTECQIAFANATRKFAAAYEANEAEYDKKKLFDPRKFLADGVKAI
                     QASVEERIDVFGSANKA"
BASE COUNT          500 a          277 c          336 g          409 t
ORIGIN      
        1 taagcgggga tggcggaatt ggcagacgcg caggactaag gatcctgtga ccgctttagg
       61 tcgtgtgggt tcaagtccca ctctccgcat agtggactag ctaaggctag tccttttgct
      121 ttgtctagat aagtgcagag cacgatatat gctagttcat aaattacaag aatgatacga
      181 aacaggcatt attatggctt tcatgaaaag atatgtgaaa gttttctcaa aactagacgg
      241 tttcaactag cattttcaaa ataaaaatgg tagaatagaa gagtatgagg tgcaacctca
      301 aaaaatatta ggaggctatc gaaatgccat tagtttcagc agaaaaattt gtccaagcag
      361 ctcgtgacaa cggttatgca gttggtggat ttaacacaaa caaccttgag tggactcaag
      421 ctatcttgcg tgcagcagaa gcaaaacaag ctccagttct tatccaaact tctatgggtg
      481 cagctaagta catgggtggt tacaaagtag ctcgtaactt gattgcaaac ttgattgaat
      541 caatgaacat tacagttcca gttgctattc accttgacca cggtcactac gaagatgcac
      601 ttgagtgtat cgaagttggt tacacttcta tcatgtttga cggttcacac cttccagtag
      661 aagaaaacct tgcaaaagca aaagaagttg tagaattggc gcacgctaaa ggtatctcag
      721 ttgaagctga agttggtact atcggtggtg aggaagatgg tatcgtaggt actggtgagt
      781 tggctccaat tgaagacgca gtagcaatgg ttgcaactgg tattgacttc ttggcagcag
      841 gtatcggtaa catccacggt ccatacccag caaactggga aggtcttgac cttgaccact
      901 tgcgtaaatt gactgaagct gtaccaggtt tcccaatcgt attgcacggt ggttcaggta
      961 ttccagatgc acaaatccaa gaagcaatca aattgggtgt tgctaaagtt aacgtaaaca
     1021 ctgagtgcca aatcgcattt gcaaacgcaa ctcgtaagtt tgcagcagct tatgaagcaa
     1081 acgaagcaga atacgataag aaaaaactct ttgacccacg taaattcttg gcagacggcg
     1141 tgaaagctat ccaagcatct gttgaagagc gtatcgacgt attcggttca gcgaacaaag
     1201 cttaatgtaa ctgcgaagaa atctcagatt tcaagcaaac aaagcataag tttcttagat
     1261 taaaccaaaa aggattttct ttcgagaatc ctttttatta taatagttga ttaagtttga
     1321 tctagttctt tgccatgaag aaatctacga tagaagtgag cagagaacag ttaaaatata
     1381 aaccgctcca aagttttcat gactgtaata acttagagaa cgaagaatta tggatggggc
     1441 gcaaactgta gtattaaaat atttacctat gagtatagat actttaaaaa aataaaaatg
     1501 aaaataattc ttgccaagtc ca
//
LOCUS       DBNFCX010000196         1413 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.198, whole genome shotgun sequence.
ACCESSION   DBNFCX010000196 DBNFCX010000000
VERSION     DBNFCX010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1413)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1413)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1413
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.198"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..>1413
                     /locus_tag="AC1PJC_002270"
     CDS             <1..>1413
                     /locus_tag="AC1PJC_002270"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF021040.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AlwI family type II restriction endonuclease"
                     /protein_id="HIP6621225.1"
                     /translation="SIKPEQSEEDLQKIISEYQYTYKNHEIFEDYYKRIFAPTLRLQS
                     ELDSVRKIFENNELSDENFIRYFNNRDSNKTSLLYKEFVLYLLEFSKKPTVELLSKIS
                     KLSKDDKIKKAFGEGKIPFNIKKNNTVEDFLDNNVDNPLLSGDGYQIYLQFIFSKHND
                     LIREYSDMCRRAFQVTGLISFENGLVNLNSKWIISPLLDLLGSKFTLTGSESYTDYEL
                     TEESLWFSDLSITEILDIQQKEVDALYEILGEEFGVTDLSQVNNIIENKREEEYRTFI
                     ESNFPIEKVLKVLELIKDRDDEQVFELVTENATVPTIYEYILTIAWYYISKNKKFKIH
                     QTFQVSLDGNKLPLTHRGGGAGDIEIVNEEYSLLIEATLMDMSTQKRGELEPVIRHSI
                     NFEISNSNSQTIFIANELDNNVLNIFRASQHIQFNGTLNSGTIDGLSIFALTTREVIQ
                     ILANNISDIELLQTIKAHRT"
BASE COUNT          547 a          184 c          241 g          441 t
ORIGIN      
        1 aatcaatcaa acctgagcag agtgaggaag atttgcaaaa aataattagt gagtatcagt
       61 atacttataa aaatcacgaa attttcgaag attactataa gagaattttt gctccaactt
      121 tacgtttaca atccgaatta gattctgtaa gaaaaatatt tgagaataac gaattatcag
      181 atgaaaattt tattagatat tttaataaca gagacagtaa taaaacatct ttactgtaca
      241 aagagtttgt cttatatctt ttggagttct caaaaaaacc aacagtggaa ctactttcaa
      301 aaatttccaa actatcaaag gatgataaga taaagaaggc gtttggagag gggaaaattc
      361 catttaatat caagaagaat aatacagtag aagattttct tgataataat gttgataatc
      421 cacttttaag tggggatggt taccagattt atcttcaatt tatttttagt aagcacaatg
      481 atttaattag agagtattct gacatgtgca gaagagcatt tcaagtaact ggtttgataa
      541 gttttgagaa tggattagtt aatctaaata gcaaatggat tatatcacct ttgcttgact
      601 tattgggaag caaatttaca ttgacaggta gcgaatcgta tactgattac gaattaacag
      661 aagaaagttt atggttttcg gacttatcaa taactgaaat tttggatatt caacaaaaag
      721 aagtagatgc tctctatgag attttaggag aagaatttgg agttacagat ttatctcaag
      781 taaataatat aattgaaaat aagcgagaag aggaatatcg tacatttatc gaatctaact
      841 tccctattga aaaagtatta aaagttctgg aattgataaa agatagagat gatgagcagg
      901 tatttgaatt agtaactgaa aacgcaactg tacctacgat ttatgaatat attttaacta
      961 ttgcttggta ctatatctcc aaaaataaga agttcaaaat ccatcaaaca tttcaagtct
     1021 cccttgatgg taacaaatta ccactgactc atagaggagg tggggcagga gatatagaaa
     1081 tagtgaatga agaatattca cttttgattg aagctactct catggacatg agtacccaaa
     1141 aacgagggga actagaacca gtaattcgtc atagtatcaa ttttgaaata tcaaatagta
     1201 attctcagac aatatttata gccaacgaac tagataataa tgttttaaac attttcagag
     1261 ctagtcaaca catacagttt aatggaactt taaactcagg aacgatagat ggtttaagta
     1321 tttttgcact tacaactaga gaagttattc aaattttagc taataatatt tcggacatag
     1381 aacttctaca aacaattaaa gctcatagaa ctc
//
LOCUS       DBNFCX010000197         1369 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.199, whole genome shotgun sequence.
ACCESSION   DBNFCX010000197 DBNFCX010000000
VERSION     DBNFCX010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1369)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1369)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1369
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.199"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..1124
                     /locus_tag="AC1PJC_002271"
     CDS             <1..1124
                     /locus_tag="AC1PJC_002271"
                     /inference="COORDINATES: protein motif:HMM:NF026945.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polymorphic toxin type 44 domain-containing
                     protein"
                     /protein_id="HIP6621226.1"
                     /translation="AVNWVGQKVNQAVNWAGNAVRQTTNWIGQQWNNFQTSAYQAGRS
                     IYNSASQYVSHQYQQAKQTVSNAWEQAKAMGQSVYNWGVSKSREAMNIARSWTKSLEE
                     TFRHSCETASFANGGTTVYASEIDFTSVKNTAQDLRLQSEIEDAKNSKLSDIEKSDLI
                     VKAYEDYLYNKNKEAFDEYWSARKGYKQWKPENGNYADTVERRLGRKLQNSGINMKEL
                     MQEMGDEILSANSNASYIPFVAGSKVSASIQDNYQFYNLVNTGQPLDLKSRAYQSDGD
                     TGYSIWSRDWGDGVKDDYAGNYLYGYVGKGYLNSSDTYLKISAGAAQEMSDIKKMGLF
                     AADWKAFKSFITGNYFDNSGDSKMIQDGIDDYKLKGGSE"
BASE COUNT          488 a          191 c          317 g          373 t
ORIGIN      
        1 acgcagtcaa ttgggtcgga caaaaggtca atcaggcagt caactgggct ggcaatgcgg
       61 taaggcagac tactaattgg attgggcagc aatggaataa tttccaaacc tcggcttacc
      121 aagcgggtag aagtatatat aacagcgcta gtcaatatgt ctctcaccaa taccagcaag
      181 caaagcaaac cgtttcaaat gcatgggaac aggctaaagc aatggggcaa tctgtttata
      241 actggggagt atctaagtcg agagaggcaa tgaatattgc acgtagttgg acgaaatcat
      301 tggaagaaac tttccgacat agttgtgaaa ctgcaagctt tgcgaatggc ggaactactg
      361 tatatgctag tgagatagat tttacgagtg taaaaaatac agctcaagat ctccgtcttc
      421 agagtgagat agaagatgca aaaaacagca agctttccga tatagaaaag tctgacttga
      481 ttgtaaaagc atacgaagat tatctctaca ataaaaataa agaggcgttt gatgaatatt
      541 ggagtgctag gaaaggatac aaacaatgga aacctgaaaa tggaaactat gctgacactg
      601 tggagagacg acttggaaga aaactacaaa attcaggtat taatatgaaa gagctcatgc
      661 aggaaatggg cgatgaaatc ctatctgcca actctaatgc tagctatatt ccattcgtgg
      721 cgggaagtaa agtatcggca agtattcaag ataattacca gttttataat ttagttaata
      781 ctggacagcc cttggattta aagagcaggg cttatcaatc cgatggagat acaggatatt
      841 caatatggag tagagattgg ggggatggag tcaaggatga ttatgcagga aattatctat
      901 atggctatgt tggaaaaggt tatctaaatt cttcggatac ttatctaaaa atttcagcag
      961 gcgctgcaca agaaatgtca gatattaaaa aaatgggact ttttgcagcg gactggaaag
     1021 catttaagag ttttataacg ggtaattatt ttgataattc tggagactcg aagatgatac
     1081 aagatggaat agatgattat aaacttaaag gaggtagcga atagaaatga aaaataactc
     1141 gttttttaag tggtgttttt tgtctatttt aatagtattt ctgatatttt tgtacattca
     1201 gatgaacagt acaacctata ttttacaacc taattcagaa agaaaagtga taattaaggg
     1261 aaattcagag agtttagatt ctgtcattag tgttactata acaagtaaga ctgatgatgg
     1321 gaagattaag ttaatatgtg gagatagttg ggttgacact aaagaggat
//
LOCUS       DBNFCX010000198         1321 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.200, whole genome shotgun sequence.
ACCESSION   DBNFCX010000198 DBNFCX010000000
VERSION     DBNFCX010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1321)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1321)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1321
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.200"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            110..967
                     /locus_tag="AC1PJC_002272"
     CDS             110..967
                     /locus_tag="AC1PJC_002272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6621227.1"
                     /translation="MIEVTDVSKAFKENVVLDSITMTASDGKITSIIGSNGAGKSTLI
                     AIIMGYYFSDGGTVQSGNVSVMPDANAMFEDVTGLEFLNFISDLKNVPREEAVKYAEI
                     LGIKDDLQKKIQGYSFGMRKKISFIQAAIGKFQNYIFDEPTSGVDGPSAQKMLEIILT
                     LKKNGAAILLTSHNLEELERVSDYIYVLEDGKITREGTVIDITSRTCLTEKDSWIEYI
                     LRVRNIDLLQSKLTEYVPEQIDSETLLIKLSKGDTIYSVFQTLQEVSEHIDEFYLYRR
                     SLRDIIYGQ"
BASE COUNT          465 a          159 c          265 g          432 t
ORIGIN      
        1 actccttatc actatattga aaaaacatgg gaagttctat ttttaatgat tttgtcggtt
       61 gcttttttat gtattggtgt ttcagttttt gagaagaagg agatatagca tgattgaagt
      121 gacggatgtt tctaaagcgt ttaaggaaaa cgtggttttg gatagtatta ctatgactgc
      181 atcagatggg aaaataacat ctatcattgg tagtaatgga gcggggaaat ccactttaat
      241 agcaatcata atgggttatt atttttcaga tggaggaaca gttcagtctg gaaatgtctc
      301 tgtgatgcca gatgcaaacg ctatgtttga ggatgttaca ggtcttgaat ttttaaactt
      361 tatatcagac ttgaaaaacg ttcctaggga agaagctgta aaatatgctg aaatactagg
      421 aatcaaagat gatttacaaa agaagattca aggctattcg tttggaatga gaaagaagat
      481 tagcttcata caagctgcta taggaaaatt ccaaaactat atttttgatg agccaacatc
      541 aggagtagat ggtccatctg ctcaaaagat gttagagatt attctgacat tgaaaaagaa
      601 tggtgcggca atattattaa catcgcacaa tttagaagag ttagagagag tttctgatta
      661 tatttatgta ttggaagatg gcaagattac aagagaagga actgttatag acattacttc
      721 tagaacgtgt ttgacagaga aagattcttg gatagagtat atccttaggg ttagaaacat
      781 tgatctttta caatcgaagt tgacagagta tgttccagag caaattgatt cagaaactct
      841 tttgattaaa ctttcaaaag gcgacacgat ttattctgtt tttcaaacat tacaagaagt
      901 atcagagcac attgacgagt tttacctcta tagaaggtca ttgagagata ttatatatgg
      961 gcaatgagcc caaacgttcg aaggctatca atggtcgcta ggactgggag aaatcctggt
     1021 cctttttgtt ggtttttata tataaattta ttgataaata tgttaactag gatattccaa
     1081 aatttcaatt tgaaattttg aaacgatttt tagaaataaa ccgataataa ctttacttta
     1141 taaactttac atgttatatt aacaatagaa aatatataaa taatatagca tcaagctagg
     1201 atgtaaaata acataggaaa ctataatgct gatgactaga ctgtttattt tatatgaaaa
     1261 ataaggatgg tggtttttat gaaaaataaa aggagtccgg atacattatt tttaagtggc
     1321 a
//
LOCUS       DBNFCX010000199         1316 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.201, whole genome shotgun sequence.
ACCESSION   DBNFCX010000199 DBNFCX010000000
VERSION     DBNFCX010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1316)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1316)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1316
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.201"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..361
                     /locus_tag="AC1PJC_002273"
     CDS             <1..361
                     /locus_tag="AC1PJC_002273"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621228.1"
                     /translation="MVIVLKYLNDIEKPTTNNLSYDFDGNGAILLDNSVTLSQGIDIL
                     LWSQNENKKFTFNNLGEFSFYYTNNIGERKNDSQYQKEAELLLNKILPPILEAQPKPK
                     INLQNLFNDKYYKQFNE"
     gene            369..887
                     /locus_tag="AC1PJC_002274"
     CDS             369..887
                     /locus_tag="AC1PJC_002274"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621229.1"
                     /translation="MKKKLLVALILTFISLLLLGIGKLYIAYNLSHYAGYYVQHMPRK
                     EGTNPELVIILTHLESVERPLTNDLSYDLGGNGTILLDNQLILSYRTEEFNLYPLYGK
                     ENYIFDTKDGRFVYYVQNLNFEEADKSKSKELEAKKLLDKILPPILEAQPKPKINLQK
                     LFNDKYYKQFNE"
     gene            895..>1316
                     /locus_tag="AC1PJC_002275"
     CDS             895..>1316
                     /locus_tag="AC1PJC_002275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621230.1"
                     /translation="MKKKLLVALILTFISLLLWGIGKLYIAYNLSYYAGYYVQQLPRK
                     EGTNPELVIILTHLDSIERPSTNKLSYDLDGNDAVLLDKSLVLAYGTDFLLWNSTKNE
                     NYHFDMTGKFSYYYTNDIDNKKYDSQYQKEAKLFLDKI"
BASE COUNT          481 a          234 c          211 g          390 t
ORIGIN      
        1 aatggttatt gtattaaagt atctaaatga tatagagaaa cctactacaa ataacttgtc
       61 ctatgacttt gacggaaatg gtgcaatatt attagataac tctgtcacat taagccaagg
      121 aatagatata ttgctctgga gtcaaaatga gaataagaaa tttacgttca ataacctagg
      181 ggaattttct ttttactata cgaataatat cggagagaga aaaaatgatt cacaatatca
      241 aaaagaggcg gaattacttc tcaataaaat cctgccccct atcttagaag cacaacctaa
      301 acccaaaata aaccttcaaa atctatttaa cgacaaatac tacaaacagt ttaatgaata
      361 agctatctat gaaaaagaaa ttacttgttg ccctaatcct aaccttcata agcctcctgc
      421 ttttggggat tggaaagctg tatattgcat ataatctctc tcactatgca gggtactatg
      481 tccagcacat gcctcggaag gaggggacca atcctgagtt ggtcatcatt ttaactcatc
      541 tggaaagtgt tgaaagacct ttgaccaatg acttgtccta cgaccttggt gggaatggta
      601 caattttatt agataatcaa ttaatcctct catatcgtac agaggagttt aacctgtacc
      661 cattatacgg aaaagaaaac tatatatttg atacaaaaga tggaagattc gtttattatg
      721 ttcaaaacct caattttgaa gaagctgata aaagtaaatc caaggagcta gaagccaaaa
      781 aacttcttga taaaatcctg ccccctatct tagaagcaca acctaaacct aaaatcaacc
      841 ttcaaaaact atttaacgac aaatactaca aacagtttaa tgaatagggt atctatgaaa
      901 aagaaattac ttgttgcact aatcctaacc ttcataagcc tcctgctttg ggggattgga
      961 aagctgtata tcgcatataa tctatcttac tacgcagggt actatgtcca acagttgcct
     1021 cggaaagaag ggacgaatcc agaattagtc atcattttaa ctcatctgga cagtattgaa
     1081 agaccttcga ccaataaatt atcctacgat cttgatggaa atgacgcagt tttattggat
     1141 aaatctttgg tgttagccta cgggacagat ttcttactct ggaatagtac taaaaatgaa
     1201 aattatcatt ttgatatgac tggaaaattt tcttattatt acactaatga tattgataac
     1261 aaaaaatatg attcacaata tcaaaaagag gcgaaattat ttctcgataa aatctt
//
LOCUS       DBNFCX010000200         1311 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.202, whole genome shotgun sequence.
ACCESSION   DBNFCX010000200 DBNFCX010000000
VERSION     DBNFCX010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1311)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1311)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1311
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.202"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..1294)
                     /locus_tag="AC1PJC_002276"
     CDS             complement(<1..1294)
                     /locus_tag="AC1PJC_002276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HIP6621231.1"
                     /translation="MKLIKQLIHILISIGLIGSFFLYAHLIQNELGSTKNDGMIEIIA
                     EQPNQVIDSIQINGRYIHSSEIIENQWGINDADLIPNFSSLGEDNSLIIKSSSSVRTL
                     SFEYFVSENPTIVKIKVGGQLVESVDTSTGDKYKNLAFIELPYTLRITKDNQFWYLHL
                     IVLALGLSCFILNGSTWRIKRRHISILTILLITQYIFTTFTFPRLYRNELVLFNSSFN
                     KMETQQLLVALTYLIFFSLLGYKQFRCHISKAFKTISLSVIYLLVPIFSLFIIENSYS
                     QFSTLSPNSLWNNLIIIGVLYLILVFTTNLRFASLLILSASVFIGISNQLLIDSRGAP
                     LLFYNLFQITDGLNVASSVAININNRMLQSMVFSYILLTFFFFIPKLYLPKLLPSRTF
                     YSSYDFKWPKRFSRILLGYITLITIVPMINKTVVSNANI"
BASE COUNT          468 a          165 c          247 g          431 t
ORIGIN      
        1 atatatttgc attagagacg acagttttat taatcattgg aacgattgtt attaaagtta
       61 tatagcccag taaaattctg ctgaaacgtt tcggccactt gaaatcataa ctagaataaa
      121 acgttctaga aggtagaagt tttggtaaat ataatttagg gataaagaaa aagaaggtca
      181 ataaaatata agaaaatacc atgctttgta gcattcgatt gttgatatta attgctacgc
      241 tagaagctac atttaatcca tctgtgattt gaaaaagatt ataaaataat agaggagcgc
      301 cacggctgtc aatcaaaagt tggttactta taccaataaa tactgaagca gatagaatta
      361 ataggctggc aaatcgtaga ttagttgtaa agaccagtat taggtagagg actccgataa
      421 tgattagatt gttccaaaga ctgtttgggg aaagagtgga gaattgtgaa tagctatttt
      481 caataataaa taatgaaaaa atgggaacta gaagataaat cactgataga ctaatcgttt
      541 tgaaggcttt agagatatga catcggaatt gtttgtatcc caaaagacta aaaaatataa
      601 ggtaagtcag tgcaactaat agctgttgag tttccatttt attaaaactg gaattaaaca
      661 ggactagttc gttgcgatat aaacgtggga atgtaaaagt agtgaatata tattgagtga
      721 ttaataatat tgttaagatg ctgatatgtc ttctcttgat tctccatgtt gatccattta
      781 agataaagca tgataggcct aaagcaagga ctattaagtg gagataccaa aattgattat
      841 ctttagttat ccgtaaagta tagggaagtt caataaaggc taaattttta tatttatctc
      901 cagttgatgt gtcaacagat tcaaccaatt gtccaccaac tttaattttt acaatagtcg
      961 gattttcact aacaaagtat tcaaatgata aggttcttac agaagaggaa gatttaatta
     1021 tgagtgaatt gtcctcacct agagaagaga aattagggat taaatcagca tcattgattc
     1081 cccattggtt ttctataatt tctgatgaat gaatatagcg tccatttatt tggatgctgt
     1141 cgattacttg gtttggttgt tctgcgatga tttctatcat tccatcattt tttgtagaac
     1201 ctaattcgtt ttgaatgaga tgtgcataga gaaaaaaact tccaatcaat ccgatggaga
     1261 ttagtatgtg aataagctgt ttgattaatt tcatatgtat taacaattct a
//
LOCUS       DBNFCX010000201         1236 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.203, whole genome shotgun sequence.
ACCESSION   DBNFCX010000201 DBNFCX010000000
VERSION     DBNFCX010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1236)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1236)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1236
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.203"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(8..>1236)
                     /locus_tag="AC1PJC_002277"
     CDS             complement(8..>1236)
                     /locus_tag="AC1PJC_002277"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HIP6621232.1"
                     /translation="YGQFGLPLSLASFYEDSKITKPEGYSLPKLNEVLEKYSPEPERQ
                     TIRPNIIFIQNESQSDFSNLQGLNMEPDPLSNQHALTDNTVHGTLNVSVFGGGTANTE
                     YEVLTSNPISLLSSNLFPYQQIITQERPSFASYLKDKNYETVALHPQSGNNYNRHAVY
                     PLLGFNKSYFLDSEPAISSLAPLTINRGWPSDQFLFNGIKELYAQKGDQPLFSFVVTM
                     QGHGGYPSTEEIYPREVSINGSTSEYLAETEFLTSMKKTDEAFADLITFFSTYKEPTV
                     IVMYGDHQPSLSQEFYAQFMDENSPAAKYSTPFVIWSNFDIKERESTTISPNYLVPYL
                     MDILSESDYTLPRSPYQQFLSDMQIEAPIITSWGNIDNSGQQIEDISNLSLYQTYLQL
                     EYNSAVDKRPLTDLYE"
BASE COUNT          364 a          199 c          259 g          414 t
ORIGIN      
        1 atttttatca ctcatataga tctgttagag gtcgtttatc aacggcacta ttgtattcta
       61 gttgtaagta ggtttggtaa agtgataggt ttgatatgtc ttcaatttgt tgaccgctat
      121 tatcgatgtt tccccaacta gtaatgatag gtgcttcgat ttgcatatcg ctcaaaaatt
      181 gttggtaagg cgatcgagga agggtatagt cggattcgga taaaatatcc atcaaatatg
      241 gaacgagata gtttgggcta atagttgtag attcacgttc cttaatatca aaattagacc
      301 aaatcacaaa aggggtagaa tatttagcag caggactatt ttcatccata aactgtgcgt
      361 aaaattcttg actcaaacta ggttggtgat cgccgtacat gacgatgacc gtaggctctt
      421 tgtaagtgct aaagaaagta attaaatcag caaatgcttc gtccgtcttc ttcatgctgg
      481 tcaaaaattc tgtttcagct aagtattcag atgttgaacc attaatgctg acttcacgag
      541 ggtaaatttc ttccgtactt ggatagcctc catgtccttg catagtgaca acaaagctaa
      601 atagtggttg gtctcctttt tgggcataaa gttcttttat tccgttgaat aagaattgat
      661 cagatggcca gccgcgatta attgtcagtg gtgctaagct actaatagca ggttccgaat
      721 ctaaaaaata agatttatta aatcctagta gaggatatac tgcatggcgg ttgtaattat
      781 ttccagattg aggatgtaga gccacggtct cataattttt atcttttaga taggatgcaa
      841 aacttggtcg ttcttgtgtg ataatctgtt gatatggaaa taaattagaa gataataaac
      901 tgattgggtt acttgtcaga acttcatact ctgtattagc tgttccgcct ccaaatacag
      961 aaacatttaa tgtaccgtga acagtattat ctgttaaagc atgttggttt gatagcggat
     1021 caggctccat atttaagccc tgtaagtttg aaaaatcact ctgtgattca ttctgtataa
     1081 agataatatt aggtctgatt gtttgtcttt ctggttcagg agagtacttc tcaagaactt
     1141 cattaagttt tgggagtgaa tatccctcag gcttagttat tttactatct tcatagaaag
     1201 atgcgagcga gagtggtagc ccaaattgac cgtagg
//
LOCUS       DBNFCX010000202         1235 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.204, whole genome shotgun sequence.
ACCESSION   DBNFCX010000202 DBNFCX010000000
VERSION     DBNFCX010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1235)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1235)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.204"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..763
                     /locus_tag="AC1PJC_002278"
     CDS             <1..763
                     /locus_tag="AC1PJC_002278"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621233.1"
                     /translation="DPHRQLATAIGIRYQELRNVYEAHELKLLVDYYTYCEQLMKQFI
                     YSVLDFDTIDSNVHRKKLLNSTLKPETFSPRVKYKEIEENLNKYLYVSAGKIKLLSFC
                     IESDTKNKHDELVLARHTYAHKGEKPSFSILSYVQSNIVFLKFLLNDFQNINTHFSIR
                     LNIQEITLQLSEEKKKLESLDDRSRNWKQRFYDLRENASNAFVLLSQLEKRSDTYLLL
                     ESQLLKFEKIDLRRTLSSNKNIIKEIDFKFLANGQ"
     gene            779..1210
                     /locus_tag="AC1PJC_002279"
                     /pseudo
     CDS             779..1210
                     /locus_tag="AC1PJC_002279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001082309.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
BASE COUNT          429 a          179 c          233 g          394 t
ORIGIN      
        1 agatcctcat agacaattag caacagcaat aggcattcgt tatcaggagt tacgaaatgt
       61 ttatgaggca cacgagttaa agctactagt tgattattat acttattgtg agcaacttat
      121 gaagcaattt atttattctg tgttagattt tgatacgata gattcgaatg tgcacaggaa
      181 aaagcttttg aatagtactc tgaaaccgga gactttttca ccaagagtta aatataaaga
      241 aattgaagaa aatcttaata agtatctata tgtttcagcg ggaaaaataa aattactgtc
      301 tttttgtatt gaatcggata ccaaaaataa acatgacgaa ttggttttgg cgagacatac
      361 ttatgctcat aagggtgaga aacccagttt tagcatctta agctacgtgc aatcaaatat
      421 tgtatttcta aaatttcttt taaatgattt tcaaaatatt aatactcact tttctattag
      481 attgaatatt caggaaatta ctttacagct gtctgaagaa aagaaaaaat tagaaagttt
      541 ggatgataga tctcgcaatt ggaaacaaag attttatgat ttaagagaaa atgcttcaaa
      601 tgcgtttgtt ttgcttagtc aactagaaaa aagatcggat acgtatcttt tattagaatc
      661 acagttgtta aaatttgaaa aaattgactt aagaaggact ttatctagca acaagaatat
      721 catcaaagag attgatttta aatttttggc aaatggtcaa tgaaaatgct ttgactgctt
      781 ttcacgaaaa cctcgcattg cccgagcctt gacagaattg ggttgggtac gtgagatgaa
      841 tgaaggtgtt aaacgtatct actcggagat ggaatctgca tttctccatg aacctaaatt
      901 ctcagaacct gggaataagg ttgtcctgac gcttgagaac aacattgtca gccgacatct
      961 ccgtacaaga gacagcttgg aaaaacagtt ctctgatttt ggtgaattaa cagcagatga
     1021 gcaactgatt gtccactata tgtataattc aggcgagaga atgacaacgg caaaagccat
     1081 tgagcttaca ggcaggagtc gatcatttgt tgttaaatta cttcataatc ttcgtgacct
     1141 agaaatcatt atttggtttg gttcaagtaa aaatgaccgc aatcagtatt atcttttagt
     1201 tgataaatga ttgtagtcgg attactatta gtaat
//
LOCUS       DBNFCX010000203         1205 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.205, whole genome shotgun sequence.
ACCESSION   DBNFCX010000203 DBNFCX010000000
VERSION     DBNFCX010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1205)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1205)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.205"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            113..622
                     /locus_tag="AC1PJC_002280"
     CDS             113..622
                     /locus_tag="AC1PJC_002280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621234.1"
                     /translation="MKKKIIVALILTFISLLLWGIGKLYIAYNLSRYAGYYVQQLPRK
                     EGTNPEMVIVLKYLNDIEKPTTNNLSYDFDGNGAIILDNSIVLSRGTYIRLRNYTENK
                     KYIFNNFGSYSYYYTDDIDKKKYDSQYQKEAELLLDKILPPILEAQPKPKINLQKLFN
                     DKYYKQFNE"
     gene            630..1145
                     /locus_tag="AC1PJC_002281"
     CDS             630..1145
                     /locus_tag="AC1PJC_002281"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621235.1"
                     /translation="MKKKLLVALILTFISLLLWEIGKLYIAYNLSHYAGYYVQQLPRK
                     EGTNPELVIILTHLDSVERPEVNGLTYNLRGNGGIIKDDSFYLFDVSDEFQLTISDED
                     GDYFFNHDNGEFLYYYTDDIDNTNSDTQYQKEAELLLNKILPPILEAQPKPKINLQKL
                     FNDKYYKQFNE"
BASE COUNT          437 a          237 c          187 g          344 t
ORIGIN      
        1 cttcttgata aaatcctacc tcctatccta gaagcgcaac ctaaacctaa aatcaacctt
       61 caaaaactat ttaactacaa atactacaaa cagtttaatg aataagctat ctatgaaaaa
      121 gaaaataatt gttgccctta tcctaacctt cataagcctc ctgctttggg ggattggaaa
      181 gctgtatatc gcatataatc tatctcgcta cgcagggtac tatgtccaac agttgcctcg
      241 gaaagagggg acgaatccag aaatggttat tgtattaaag tatctaaatg atatagagaa
      301 acctactaca aataacttgt cctatgactt tgacggaaat ggtgcaatta tactggataa
      361 ttcaatagta ttaagtcgag ggacatatat ccgtctgcgg aactatacag aaaataaaaa
      421 gtatattttc aataatttcg gtagttattc ttattattac actgacgata tagacaaaaa
      481 aaaatatgat tcacaatatc aaaaagaggc ggaattactt ctcgataaaa tcttgccccc
      541 tatcctagaa gcgcaaccca aacccaaaat caaccttcaa aaactattta acgacaaata
      601 ctacaaacag tttaatgaat aagctatcta tgaaaaagaa attacttgtt gcccttatcc
      661 taaccttcat aagcctcctg ctttgggaga ttggaaagct gtatatcgca tataatctat
      721 ctcactatgc agggtactat gtccaacagt tgcctcggaa ggaggggacc aatcctgagt
      781 tggtcatcat tttaactcat ctggacagtg ttgaaagacc agaagtaaac ggacttactt
      841 ataacttaag gggaaatggt ggtatcataa aagatgatag tttttacctt tttgatgtgt
      901 cggatgaatt tcaactgact atatcagatg aagatggaga ctacttcttt aaccatgata
      961 acggtgaatt tttgtattat tacactgatg atatcgacaa tacaaattct gacacgcaat
     1021 atcaaaaaga ggcggaatta cttctcaata aaatcctgcc ccctatccta gaagcgcaac
     1081 ctaaacctaa aatcaacctt caaaaactat ttaacgacaa atactacaaa cagtttaatg
     1141 aataagctat ctatgaaaaa gaaaattctt gttgccctaa tcctaaccat cataagcctc
     1201 ctgct
//
LOCUS       DBNFCX010000204         1202 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.206, whole genome shotgun sequence.
ACCESSION   DBNFCX010000204 DBNFCX010000000
VERSION     DBNFCX010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1202)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1202)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1202
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.206"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..604)
                     /locus_tag="AC1PJC_002282"
     CDS             complement(<1..604)
                     /locus_tag="AC1PJC_002282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis C-terminal
                     domain-containing protein"
                     /protein_id="HIP6621236.1"
                     /translation="MKSKIVSPKTIFIWNLLGSISSAAISIFLLLLVTRLLTELEADI
                     FSFAYAVANLFVIIASFQVRDYQATDVSKKFSFSQYLATRLITITIMLLLALSYIFLS
                     KYEFQKSVCIFLICLYRGSDALSDVFQGLFQQNARLDIAGKSLFLRNSIVILTFGIGL
                     FITNNLLLSLIYLVISSYLFVFFFDVPNLFQFTRIIKEEIN"
     gene            complement(637..>1202)
                     /locus_tag="AC1PJC_002283"
     CDS             complement(637..>1202)
                     /locus_tag="AC1PJC_002283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="rhamnan synthesis F family protein"
                     /protein_id="HIP6621237.1"
                     /translation="QLRKMFFTSFDAAISNFESQSSLAVVIPDLTTNQRYDRQSLREG
                     NPELIRQLNMLYESLVRTKKVDFYKVPYIIGEEVSWYWIKTEHYKKIEEKFRNIDFSK
                     EDRLLLVPILFIYSAWDLSNDYAVVENTENVSPILEKISFSSERELRLIIEEKEFLQI
                     GLRRTLKIISVGIVSVFKMIKKSLLKN"
BASE COUNT          428 a          219 c          149 g          406 t
ORIGIN      
        1 aattaatttc ttctttgata atcctcgtaa attgaaacaa attcggaaca tcaaaaaaga
       61 aaacaaataa atatgaacta attactagat agattaatga gagtagcagg ttattggtta
      121 taaacaaacc aattccaaat gtcaaaatca caatagagtt tctcaaaaaa agtgatttac
      181 ctgcaatatc tagccgagca ttttgttgga acaatccttg aaaaacgtcc gacagagcat
      241 cacttccgcg atacaaacat attaggaaaa tacaaacaga tttttgaaat tcatatttag
      301 acagaaaaat atagcttaag gcaagtaata gcataatagt gattgttata agccttgttg
      361 caagatactg gctaaacgaa aactttttcg aaacatcagt agcttgataa tctcttacct
      421 gaaaactagc aatgattaca aaaagatttg ctactgcata ggcaaaacta aaaatatcag
      481 cctctaattc cgtcaacaaa cgtgttacta gtaacaataa aaatattgat attgctgctg
      541 aagaaatact tcctaataaa ttccaaataa atattgtttt tggtgatact attttgctct
      601 tcacactatc ttccccttgt ttgtcatccg ttatccctaa ttttttaata gagatttctt
      661 tatcatctta aacacgctta caattccaac tgatattatc tttagtgtcc ttctcagtcc
      721 aatttgtaaa aattcctttt cttcaataat taaacgcaat tctctttcgc tagaaaaact
      781 aatcttttcc aagattggac tcacattttc agtattctcg accactgcat aatcgtttga
      841 taaatcccac gcgctataaa taaataatat tggaactagc aataatctat cttcttttga
      901 aaaatcaatg tttctaaatt tctcctcaat ctttttatag tgttctgttt ttatccaata
      961 ccaacttact tcttctccaa ttatataagg cactttataa aaatcaactt tcttagttct
     1021 cacaagtgat tcataaagca tattcaattg acgaataagt tctggattgc cctctcgaag
     1081 actttgtcta tcatatcttt gattggttgt taagtctgga ataactacag ccaagctaga
     1141 ttgtgattca aaattagaaa tcgctgcatc aaatgatgta aaaaacattt tcctcaactg
     1201 at
//
LOCUS       DBNFCX010000205         1183 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.207, whole genome shotgun sequence.
ACCESSION   DBNFCX010000205 DBNFCX010000000
VERSION     DBNFCX010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1183)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1183)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.207"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            64..603
                     /locus_tag="AC1PJC_002284"
     CDS             64..603
                     /locus_tag="AC1PJC_002284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HIP6621238.1"
                     /translation="MKTTSIKSLVYIAIGTALISTLSQISLSIGPVPFTLQTLAIGLV
                     ACLYKPKEAITSVSLYLVLGAIGLPVFAGFSGGFAALTGPTSGFLWGFLLYTIITSAL
                     TKSDSSPVTIFLSCLLGTSICFLLGCFVFKLVSGASWTDSIGWTVLPFILPDLAKITL
                     VMICHRLLQPVIKKEAYFA"
     gene            complement(615..830)
                     /locus_tag="AC1PJC_002285"
     CDS             complement(615..830)
                     /locus_tag="AC1PJC_002285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018167072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbC family protein"
                     /protein_id="HIP6621239.1"
                     /translation="MAEFTFEIEEKLLVLSENDKGWTKELNRVSFNGAPAKYDIRTWS
                     PDHTKMGKGITLSNEEFQVLLDAFANK"
     gene            922..>1183
                     /locus_tag="AC1PJC_002286"
     CDS             922..>1183
                     /locus_tag="AC1PJC_002286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621240.1"
                     /translation="MKRFLEVIFEQITVFLEHGKAPKSIEPDSKEDIKNNLELALYKK
                     AAVHVIYGDRSFTGDIVKYDTDRQRIIMKNFKRQVTSIIKIED"
BASE COUNT          331 a          249 c          198 g          405 t
ORIGIN      
        1 ttgactttct tatccaatct cactataatt tttgttaacc ataaaatttt aagaggataa
       61 caaatgaaaa cgacttctat caaatcactt gtttatatcg ctattggaac agccttaatt
      121 tccacccttt cacaaatcag tctgtctatc ggacctgtac catttacatt acaaacccta
      181 gctatcggct tagtagcttg tctatacaaa cccaaggagg caattacaag tgtcagctta
      241 tatctagttc ttggcgctat cggtttacct gtttttgctg gtttttctgg tggctttgct
      301 gcactcacag gaccgacctc gggctttcta tgggggtttc tactctacac tatcatcact
      361 tctgccctca ctaaatcaga ctcctcacca gttacaattt ttctatcctg cctacttgga
      421 acaagtatct gtttccttct cggctgtttt gtatttaagc tagtttcagg tgccagttgg
      481 actgactcta tcggatggac tgttctgcct ttcattcttc ctgatttagc taaaattaca
      541 ctagtcatga tttgtcatcg tttattgcaa cctgttatca aaaaagaagc ctatttcgct
      601 taggcttcct tcatttattt attagcaaac gcgtcgagta gaacttgaaa ttcctcatta
      661 ctaagagtga tccctttccc catcttggta tggtcaggac tccaggtacg gatgtcatac
      721 ttggctggtg cgccattaaa agatactcga ttaagctcct tggtccatcc tttatcattt
      781 tcagataaga ccaataattt ttcttcaatt tcaaatgtaa attctgccat ttgttacctc
      841 ctcacttatc tattcgaaaa agcttgtcat ttttataaaa attagataat ataattatat
      901 caagtttgaa aggattatgc catgaagagg tttttagaag ttattttcga gcagatcacc
      961 gtctttttag aacatggcaa agctcctaag tctattgagc cagatagcaa ggaagatatc
     1021 aagaataact tggagctggc tttatataaa aaagctgcag tccatgtcat ctatggtgat
     1081 cgtagtttca caggtgacat tgtgaaatat gataccgatc gccaacggat tatcatgaaa
     1141 aatttcaaac gtcaggttac cagcattata aaaatcgagg aca
//
LOCUS       DBNFCX010000206         1153 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.208, whole genome shotgun sequence.
ACCESSION   DBNFCX010000206 DBNFCX010000000
VERSION     DBNFCX010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1153)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1153)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.208"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(334..585)
                     /locus_tag="AC1PJC_002287"
     CDS             complement(334..585)
                     /locus_tag="AC1PJC_002287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621241.1"
                     /translation="MFKEFNKEYYRSLNFYLMILLFLGSIGEWLNKGPSLWLALLLFA
                     TVGTARSAFWSKEWTLKANWQIYLCIAFLLVGAWVEFFV"
     gene            complement(668..850)
                     /locus_tag="AC1PJC_002288"
     CDS             complement(668..850)
                     /locus_tag="AC1PJC_002288"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621242.1"
                     /translation="MSRKFNKVFYRTWEFYLSLSCILQVIYAAVNGPFWFIHFLKLGL
                     GLYAGYLAFFKSRSWI"
     gene            complement(864..>1153)
                     /locus_tag="AC1PJC_002289"
     CDS             complement(864..>1153)
                     /locus_tag="AC1PJC_002289"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621243.1"
                     /translation="KEREVIVMKFQFNKHFYRYSAFYSMIFWTCFFLSDILLDPSQTP
                     AWYSLLACLIIFINAIRVFFFKEEKELTRMGYIFYIGLIVVIIYLKFILGK"
BASE COUNT          397 a          246 c          207 g          303 t
ORIGIN      
        1 ggtttaacag tccagtggac tgttaaaggt tggagatagg atttgcgaag caaatctcag
       61 caattcgtgt tttacactcc aaatctgacc attacgactg ttgcgaacaa agttcgctct
      121 atttccaacc tcaaaaggtt cactgaacct ttttgtaacg aaccttgttc gctctatctc
      181 caacctccaa cagtcactac cctgactgtt ggagctatgc gggggtggga gtgaaacagt
      241 ctgggaatag actgtttcag ctcaacaact ggaaataagg acttgttgac gaactctttt
      301 tgacttagtc gagttctttc ccactcccaa ctcttaaaca aaaaattcta cccaagctcc
      361 aacaagcaag aaagcgatac agagatagat ttgccaattt gcttttaagg tccattcttt
      421 agaccaaaag gcactacggg cagtaccgac agtagcaaag agcaagagtg caagccagag
      481 gctaggtccc ttgtttagcc attccccgat acttcctaga aacaacaata tcatcagata
      541 aaaattcaaa ctccggtaat attctttatt aaattcctta aacattgaaa atcctcacag
      601 tacaaagaag gaaacgatta tccaactagc aatcaatcca atcgtcagat aaatttgcca
      661 tgttttttta aatccagcta cgtgacttaa agaaagctag gtaaccagca taaagcccga
      721 gtccaagctt gagaaaatgt ataaaccaaa acggtccatt tacagcagca taaatcactt
      781 gtaggataca ggaaagagac aagtaaaatt cccaggtccg atagaatact ttattgaatt
      841 tcctagacat agtagactcc attctattta cccaaaatga atttcagata gataatcacc
      901 acgatcaatc cgatatagaa aatgtagccc atgcgagtga gctccttttc ttctttgaag
      961 aagaataccc gaatggcatt gataaaaata atcagacagg ctagtaggct ataccatgca
     1021 ggagtttggg aagggtctag caaaatgtct gacagaaaaa aacaagtcca aaaaatcata
     1081 gaatagaagg cactataccg atagaaatgc ttgttaaact ggaatttcat gacaatcacc
     1141 tctctttctt tta
//
LOCUS       DBNFCX010000207         1117 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.209, whole genome shotgun sequence.
ACCESSION   DBNFCX010000207 DBNFCX010000000
VERSION     DBNFCX010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1117)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1117)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.209"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..1076)
                     /locus_tag="AC1PJC_002290"
     CDS             complement(<1..1076)
                     /locus_tag="AC1PJC_002290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004250524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HIP6621244.1"
                     /translation="MKQELEQLLAQNDTFMVEGVLNKNKLAELARQYNPELLNILMSN
                     DKISNHFFSILDTGVLVFKKDVFLQFLNNKEFLPDSFTAYKTKIGLAIGDKYLSENQE
                     VVLNFPYKDCVLEGGQTKDDAKRQEIFFNETLAPTEINRLLDDKVLTNFKRYDETGEH
                     EVEVLNDTDNLIIKGNNLIALHSLKKRFAGKIKLIYIDPPYNTGNDSFQYNDNFNHST
                     WLTFMKNRLEVARELLSEDGLIFVHLDYNEAHYFKVLMDSIFGQDKFVNEIIWRRKQA
                     TSFGKSKFGITNDTIFMYSKTSSYKFFPIYTLDDENTQKYIKERFKFDDNDGRGKYMK
                     SPLVNSLYRPNLKYEFYGIKPPKNG"
BASE COUNT          347 a          215 c          176 g          379 t
ORIGIN      
        1 ccattcttgg gaggcttaat accataaaac tcatacttca aattagggcg atataatgaa
       61 tttactagag gagatttcat atacttacct ctaccatcat tatcgtcaaa cttaaatctt
      121 tctttaatgt atttttgagt gttttcgtca tcaagagtat atatgggaaa aaatttataa
      181 ctactcgttt tcgaatacat aaaaattgta tcatttgtga ttccaaattt actttttcca
      241 aaagaggtag cttgcttcct tctccaaatt atctcgttaa caaatttatc ttgcccaaaa
      301 attgaatcca tcaatacttt aaaataatga gcttcattat aatctaagtg aacaaaaatt
      361 aatccgtcct cactcagtaa ctcccttgca acttccaacc gatttttcat aaatgtcaac
      421 caagtagaat ggttaaaatt atcgttatat tggaagctat catttcccgt attataaggt
      481 ggatcaatgt aaatcaactt aattttccct gcaaagcgtt tcttgaggct atgaagggca
      541 atgaggttat tacctttgat gatgaggtta tcggtatcat tgagtacttc tacttcatgc
      601 tcaccagttt catcatagcg tttgaagttg gtcaaaacct tatcatctag cagacgattg
      661 atttcagttg gtgcgagtgt ctcgttaaag aaaatctcct gacgtttggc atcatcctta
      721 gtctgtccac cctctagcac acaatctttg tatggaaaat tcaggacaac ttcctgattt
      781 tctgataaat acttgtcacc gatcgccaaa ccgattttag tcttgtaggc ggtaaagctg
      841 tcagggagaa actccttatt attcagaaac tgcaaaaaga catctttctt gaagacaaga
      901 acgccagtat ctagaataga aaagaaatga ttagaaattt tatcattact catcaatata
      961 ttaaggagtt caggattgta ttgtctcgcc agctcggcca gtttattttt attgagcaca
     1021 ccttccacca taaaagtgtc attttgtgcc agaagttgct ccaattcttg cttcattatt
     1081 agatctacct ttcagctgaa aattcctaaa gggctga
//
LOCUS       DBNFCX010000208         1112 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.210, whole genome shotgun sequence.
ACCESSION   DBNFCX010000208 DBNFCX010000000
VERSION     DBNFCX010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1112)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1112)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.210"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            134..>1112
                     /gene="guaC"
                     /locus_tag="AC1PJC_002291"
     CDS             134..>1112
                     /gene="guaC"
                     /locus_tag="AC1PJC_002291"
                     /EC_number="1.7.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007891361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902560 - GMP reductase complex [Evidence
                     IEA];
                     GO_function: GO:0003920 - GMP reductase activity [Evidence
                     IEA];
                     GO_process: GO:0006163 - purine nucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMP reductase"
                     /protein_id="HIP6621245.1"
                     /translation="MFNETPVFDYEDIQLIPNKCIINSRSEADTTVTLGKYSFKLPVV
                     PANMQTIIDEDVAEMLAKEGYFYIMHRFDEAGRIPFIKRMHEQGLIASISVGVKEYEY
                     EFVTSLKADAPEFITIDIAHGHAESVIKMIQHIKKELPETFVIAGNVGTPEAVRELEN
                     AGADATKVGIGPGKVCITKVKTGFGTGGWQLAALRWCAKAARKPIIADGGIRTHGDIA
                     KSIRFGASMVMIGSLFAGHIESPGKTIEVDGEKFKEYYGSASEYQKGAYKNVEGKKIL
                     LPAKGHLKDTLVEMEQDLQSSISYAGGRDITSLKHVDYVIVKNSIWNGDS"
BASE COUNT          352 a          197 c          249 g          314 t
ORIGIN      
        1 gaatattgtc tagataggtt tcttttttat tgacaaaaca caaacaataa gctatactat
       61 atcttgtaat aaggaaaaaa tacgaaaaac aaactgtttt tctgttccaa tgttaagaaa
      121 aagaggtaga agcatgttca acgaaactcc agtttttgac tacgaagata ttcagctcat
      181 tccaaataaa tgtatcatca atagccgttc cgaggcagat acaacagtga ctcttgggaa
      241 atatagcttt aaattaccag ttgttccagc taatatgcag actattattg atgaagatgt
      301 ggcagaaatg cttgccaaag aagggtattt ctacatcatg catcgtttcg atgaagcagg
      361 tcgtattcca tttatcaaac gcatgcacga gcaaggtttg attgcttcca tctctgttgg
      421 cgtaaaagaa tatgaatatg agtttgtgac tagcttgaaa gctgatgccc ctgagtttat
      481 caccattgat attgctcatg gtcatgcaga aagtgttatc aagatgatcc aacatatcaa
      541 gaaagaatta cctgagactt ttgtcattgc aggtaatgtc ggtactccag aagcagttcg
      601 tgaactagaa aatgctggtg cggatgcgac aaaagttggt attggtccag gtaaagtatg
      661 tattacaaag gttaagactg gttttggtac aggcggttgg cagttggcgg cccttcgttg
      721 gtgcgcaaaa gctgcccgta aaccaattat tgcggacgga ggtatccgta cccacggaga
      781 tattgccaaa tctatccgct tcggcgcaag catggtcatg attggctcgc tgtttgcagg
      841 gcacattgaa agcccaggta aaacaattga agttgatggc gagaaattca aagagtacta
      901 cggttctgca tctgaatacc aaaaaggtgc ctataaaaac gtagaaggta agaaaatctt
      961 actccctgcc aaaggacatt tgaaagatac tctggttgaa atggagcaag atttgcagtc
     1021 atctatttct tatgcaggag gacgtgacat taccagtttg aagcatgtgg actatgttat
     1081 cgtgaaaaac tctatctgga atggtgactc ta
//
LOCUS       DBNFCX010000209         1043 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.211, whole genome shotgun sequence.
ACCESSION   DBNFCX010000209 DBNFCX010000000
VERSION     DBNFCX010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1043)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1043)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.211"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..>1043
                     /locus_tag="AC1PJC_002292"
     CDS             <1..>1043
                     /locus_tag="AC1PJC_002292"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621246.1"
                     /translation="RNHTPLPGLEGEGHVTLEKLPDISKEGLHIPELPQHSPELSGSN
                     RTPLPGLEGEGHVTLEKLPDISKEGLHIPELPQHSPELGGSNRTPLPGLEGDDRTGDS
                     GLSGRNRTPLPDLEGEGHVTLEKLPDISKEGLHIPELPQHSPELGGSNRTPLPGLEGE
                     GHVTLEKLPDISKEGLHIPELPQHSPELSGSNRTPLPGLEGDNHTGDSGLSDRNHTPL
                     PGLEGDNHTGDSGLSGRNHTPLPGLEGEGHVTLEKLPDISKEGLHIPELPQHSPELGG
                     SNRTPLPGLEGDNHTGDSGLSGSNRTPLPSLEGEGHVTLEKLPDISKEGLHIPELPQY
                     SPELGGSNRTPLP"
BASE COUNT          305 a          266 c          219 g          253 t
ORIGIN      
        1 tcgtaatcac actccacttc caggtttgga aggcgaaggt catgtcactc ttgaaaaact
       61 tccggatatt tcaaaagagg gcctccatat tcctgaactg ccacaacact caccagaatt
      121 aagcggtagc aatcgtactc cacttccagg tttggaaggc gaaggtcatg tcactcttga
      181 aaaacttccg gatatttcaa aagagggcct ccatattcct gaattgccac aacattcacc
      241 agaattaggc ggtagcaatc gtactccact tccaggctta gaaggtgatg accgcacagg
      301 tgattcaggc ctaagcggtc gtaatcgtac tccacttcca gatttggaag gcgaaggtca
      361 tgtcactctt gaaaaacttc cagatatttc aaaagagggc ctccatattc ctgaactgcc
      421 acaacattca ccagaattgg gtggtagcaa tcgtactcca cttccaggtt tggaaggcga
      481 aggtcatgtc actcttgaaa aacttccaga tatttcaaaa gaggggctcc atattcctga
      541 attgccacaa cactcaccag aattaagcgg tagcaatcgt accccacttc caggcctaga
      601 aggtgataac cacacaggtg attcaggcct aagtgatcgt aatcacactc cacttccagg
      661 tttggaaggt gataaccaca caggtgattc aggcctaagc ggtcgtaatc acactccact
      721 tccaggtttg gaaggcgaag gtcatgtcac tcttgaaaag cttccggata tttcaaaaga
      781 gggcctccat attcctgaac tgccacaaca ttcaccagaa ttaggcggta gcaatcgtac
      841 tccacttcca ggcttagaag gtgataacca cacaggtgat tcaggcctaa gcggtagcaa
      901 tcgtactcca cttccaagtt tggaaggtga aggtcatgtc actcttgaaa aacttccaga
      961 tatttcaaaa gagggcctcc atattcctga attgccacaa tactcaccag aattgggtgg
     1021 tagcaatcgt actccacttc cag
//
LOCUS       DBNFCX010000210         1002 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.212, whole genome shotgun sequence.
ACCESSION   DBNFCX010000210 DBNFCX010000000
VERSION     DBNFCX010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1002)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1002)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.212"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..>1002
                     /locus_tag="AC1PJC_002293"
     CDS             <1..>1002
                     /locus_tag="AC1PJC_002293"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621247.1"
                     /translation="NNTKTTQIFSIISPYKYGKSYLVKNYFSSPTIQQFPKIFISFSS
                     DDVCNLENLVQLVHFILFPLLHDLVIKDDYPTPLSSSLKSFIQQYQAKNYEALFRYFQ
                     LDILTDFFQQFKETQFFKLVIVENFQFLSNEYKEFFEHIIQACYNEDYNIFFVVTSTN
                     PLTFPKDVIHISEALSLDGINPIYEPLKESIKNIKQLQDLNTFPSLKLEPAKLLIHFS
                     SNENIKSFEDLSKEELEVIKSVFLNYSLPPNDIQLYSEATISLLEKNFLGFDLNQQLV
                     PFSSNLLEEFLNWIIDNGNELFISENINFNHPLQEIFVSLFIDKNREKSQKAIATLQQ
                     "
BASE COUNT          371 a          173 c          116 g          342 t
ORIGIN      
        1 aataatacta aaactactca gattttttca attatttctc cctataaata tggaaaaagc
       61 tatctagtca aaaattattt ttcatcacct actattcagc aattccctaa aatatttata
      121 tcattttcat cggatgatgt ctgcaatttg gaaaatttag ttcagctagt gcattttatt
      181 ttgttcccgt tgctacacga tctggtcatc aaagatgatt atccaactcc tctcagtagt
      241 tccttaaaat catttataca acagtatcaa gctaaaaatt acgaagcact ttttagatat
      301 tttcaattag acattctaac ggactttttt cagcaattta aggaaactca attctttaaa
      361 ttagttattg tagaaaactt tcaattttta tcaaacgaat acaaagaatt ttttgaacat
      421 ataattcaag cttgctataa tgaagattac aatattttct ttgtcgttac ttcaacaaat
      481 ccattaactt ttccaaaaga tgtcattcac atatcagaag cattatccct ggacggaata
      541 aacccaatct atgaaccatt aaaagaatcc attaagaata taaaacaatt acaggactta
      601 aatacttttc ctagcttaaa actcgaaccc gctaaactat taattcattt cagtagcaac
      661 gagaatatta aaagttttga agatttaagc aaagaagaac ttgaagtaat aaagtctgtt
      721 ttcttgaact atagtctccc accaaatgat attcaactat atagcgaagc aacaatatct
      781 ttattggaaa aaaattttct aggttttgac ctcaaccaac aactagtgcc attctcttct
      841 aatttattag aggagttctt gaactggatt atagacaatg ggaatgaatt atttatctct
      901 gaaaatataa atttcaatca tcctctccaa gaaatatttg tctccttatt tatagataag
      961 aatagagaaa aaagtcaaaa agcaattgct acgcttcaac aa
//
LOCUS       DBNFCX010000211          997 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.213, whole genome shotgun sequence.
ACCESSION   DBNFCX010000211 DBNFCX010000000
VERSION     DBNFCX010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 997)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 997)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..997
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.213"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..>997
                     /locus_tag="AC1PJC_002294"
     CDS             <1..>997
                     /locus_tag="AC1PJC_002294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HIP6621248.1"
                     /translation="VFGIDVSKVSSEVAILVNGEKVHNYTMSNDAIGFSRLLGDLKTV
                     HKPEIIFEATGVYSRRLQTFLEDNGYAYTRLNPLEAKKQLDSLRVRKTDQIDAEKLAQ
                     SQFVLNRKPTYVQEEVYQNLRDLSRFYQNLTEDIVRAKNRLHKVLQVTFPELETILST
                     PTGEQYWNLVIAFPCKDFVLELSKDELSKSIRLSTSKRISDKRVAYLAEKLTALANQS
                     YCAVKKTSPVLEEVRYYAKELLRLFEQRQTVLDKMVTLAKPLPEYDILLSIPGIAETT
                     ATSIIGELGDIRRFQSANQINAFIGIDLRHYESGNFLAKEHITKRGNPYARKILFK"
BASE COUNT          301 a          212 c          206 g          278 t
ORIGIN      
        1 agtatttggg attgacgtga gtaaggtaag ttcagaagta gccattctag tcaatggcga
       61 gaaggtacat aactacacca tgtccaatga tgccattggc ttttctcggc tacttggcga
      121 tttgaaaacc gtccacaagc ctgaaatcat ctttgaagca acaggcgttt attctcgtcg
      181 tcttcaaact tttctagaag ataatggcta tgcttataca cggctcaatc ccttagaagc
      241 taagaagcaa ctggatagct tgcgtgtgcg gaaaacagat caaattgacg ctgaaaaact
      301 ggctcagtct cagtttgtac tgaatcgtaa accgacctat gtccaagaag aagtctatca
      361 aaatttgcga gatttaagtc gattctatca gaacttaacc gaggacatcg ttcgagctaa
      421 aaaccgcctg cacaaggtct tacaggtcac ttttcctgaa ttggaaacta tcttatcaac
      481 accaactggg gaacaatact ggaacttagt tatagctttt ccttgtaagg acttcgtgct
      541 tgagttaagc aaggatgaac tctcaaagag catccgtctg tccacttcaa aacggatttc
      601 tgacaagcgt gtggcttact tagcagagaa gctgacagca ctagctaatc aatcttattg
      661 tgccgttaag aaaacctctc cggtcttgga agaggtgcgt tactatgcaa aagaattgct
      721 tagacttttt gaacagagac aaactgtctt agacaaaatg gttactctag ctaagccttt
      781 accagagtat gacattctgc tttctattcc tggaatagct gagacgactg caacaagtat
      841 tattggcgaa ctgggagata ttcgccgttt tcagtctgcc aatcaaatca atgcctttat
      901 cggtattgac ctgagacact atgaatctgg taacttcctc gctaaggaac acattaccaa
      961 gcgtggaaat ccctacgcta gaaagattct gttcaaa
//
LOCUS       DBNFCX010000212          997 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.214, whole genome shotgun sequence.
ACCESSION   DBNFCX010000212 DBNFCX010000000
VERSION     DBNFCX010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 997)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 997)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..997
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.214"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..>997
                     /locus_tag="AC1PJC_002295"
     CDS             <1..>997
                     /locus_tag="AC1PJC_002295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621249.1"
                     /translation="SEILQIILSVNKRKKKTAGWVKQEAIVNSIFQFLEIPGKEDEDF
                     YVSTSDCSKYFNGRKNIPQKIRNYLAQQESPQIIEKFAQQLLQYTETSNVTVAKKLHE
                     TATEQTPVATCENLQFLEQEKRLNSFYSQEKYAHYIAATILFSLIHVPNAPNCQQEES
                     SLLDSLHFNQDLEEAIQQGRYYQSYERDIIIHPDRKKKEYNVLVKRLFTSHYPNPVHP
                     HKDRFLLSSFYSTPTLRSNNHFISLKINQIDYSDRVQVMDEDLDIEKHRFPYKRSLLV
                     ENLPASDLYQIDLQTKYFANFPIRFGSFRLHSPAKRFKVTVRIRTNEKRKLCLTLK"
BASE COUNT          324 a          257 c          169 g          247 t
ORIGIN      
        1 agtgaaattt tacaaattat tctatccgtc aataagagaa aaaagaagac agctggctgg
       61 gtgaaacaag aagccatcgt caatagtatc tttcaatttc tagaaatacc aggcaaagaa
      121 gatgaagact tctatgtcag cacttcagat tgctctaagt atttcaatgg gcggaagaac
      181 atcccacaaa aaatcaggaa ctacctggca caacaagaat ctcctcaaat catagaaaag
      241 tttgctcaac aattattgca gtatacagaa acttccaacg ttactgttgc caaaaaatta
      301 catgaaactg cgactgaaca aacaccagtc gcaacttgtg aaaatctgca gtttttagaa
      361 caggaaaaaa gattaaactc tttttattct caggaaaaat atgcccacta tatagcagca
      421 accatcctct tttctctcat ccatgttccc aatgccccta actgccaaca agaggagagc
      481 tctctcctag atagcctcca cttcaaccaa gatttggaag aggctatcca gcagggacgc
      541 tactaccaat cttacgagcg ggacattatc atccatccag ataggaagaa aaaagaatat
      601 aatgtgctgg tcaagcgact gtttacctcc cactacccca atcctgtcca ccctcataag
      661 gaccgctttc ttttgagcag cttctactcc actcccaccc tacgtagcaa caaccacttt
      721 atcagcctaa agattaacca gattgactat tctgacaggg tgcaggttat ggatgaagac
      781 ctggacattg agaaacatcg cttcccctac aaacgtagct tgttagtgga aaatcttcca
      841 gcttccgacc tctaccagat tgacctgcag accaagtact ttgccaactt tcccatccgt
      901 ttcggcagtt ttcgcctgca ttctccagcc aaacgtttca aggtcaccgt ccgtatccgt
      961 accaatgaaa agcgcaaact ctgcctgacc ctgaaaa
//
LOCUS       DBNFCX010000213          996 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.215, whole genome shotgun sequence.
ACCESSION   DBNFCX010000213 DBNFCX010000000
VERSION     DBNFCX010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 996)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 996)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..996
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.215"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            93..836
                     /locus_tag="AC1PJC_002296"
     CDS             93..836
                     /locus_tag="AC1PJC_002296"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015605324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent DNA methyltransferase"
                     /protein_id="HIP6621250.1"
                     /translation="MATYETFAAVYDEIMDDSLYDKWTDFSLRNLPQDTKTILELACG
                     TGIQAVRFAQKGYEVTGLDLSYEMLELAQKKAEAAGVMMELAQADMMALEGVGDFDAV
                     TCYSDSLCYMSDQEAVLRVFEGVHSILNQGGTFLFDVHSIYQMEEVFAGYSYHENYED
                     FAFVWDTYEGEHAHSIVHELTFFVKDEDSQGERFVRRDEVHEERTYPIETYVECLKQA
                     GFASVEVFADFEDQAPTETSQRWFFKCKK"
BASE COUNT          304 a          158 c          248 g          286 t
ORIGIN      
        1 aaagatatct tttttgattt aaaaaataag gacatcatct tgaaatataa tgaagaaatg
       61 ttagaagaac atttcggata atggagaaaa atatggcaac ttatgaaacc tttgcggcgg
      121 tctatgatga aatcatggat gacagcttgt atgataaatg gacagatttt agcttgcgga
      181 acttgccaca agataccaag acaattttgg aattggcctg tgggacaggg attcaggctg
      241 tgcgttttgc tcaaaagggt tatgaggtga cagggcttga cctgtcctat gaaatgttgg
      301 aattggccca gaaaaaagca gaagctgctg gtgtcatgat ggagttggcc caagcagata
      361 tgatggctct ggaaggtgtt ggagatttcg atgcggtaac ctgttattcg gacagtctgt
      421 gctatatgtc ggaccaagaa gccgttttgc gggtctttga aggagttcac tctattctca
      481 atcaaggtgg tactttcctt tttgacgttc actccatcta tcaaatggag gaagtgtttg
      541 caggctatag ctaccatgaa aactacgagg attttgcctt tgtctgggac acctatgagg
      601 gtgagcatgc gcattccatt gttcacgaat tgaccttctt tgtcaaagat gaggacagtc
      661 aaggggagcg atttgtccgt cgggatgaag ttcatgaaga gcggacctat ccgattgaaa
      721 cctatgtgga atgtttgaaa caagctggtt ttgcctctgt ggaagtcttt gcggactttg
      781 aagatcaagc tccgacagaa accagccagc ggtggttttt caagtgtaaa aagtaagatt
      841 taaaattaaa gtgaagtttt cggatcccac caattagagt gggattttgt gatataataa
      901 aaataaatat atctgtaaag gaaaatgaca tggagagttt acatcgtaaa atcagtaact
      961 ggggtcaaaa aatattcctt cagttcaaaa atagaa
//
LOCUS       DBNFCX010000214          991 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.216, whole genome shotgun sequence.
ACCESSION   DBNFCX010000214 DBNFCX010000000
VERSION     DBNFCX010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 991)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 991)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..991
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.216"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..413)
                     /locus_tag="AC1PJC_002297"
     CDS             complement(<1..413)
                     /locus_tag="AC1PJC_002297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2142 domain-containing protein"
                     /protein_id="HIP6621251.1"
                     /translation="MKIEKLFLRLAIPFLLISIFVMPVTKVPDEATHAFMSWNILFDS
                     PTSRDTEAMNELRAADFTYSEPEIHAVDSTEYSSLFTKIRDFSKDKLSIDFSLKSLMS
                     TPQLIGLVVGKLIYPSYGMMVTIGRLFNTIVYIIG"
     gene            complement(410..>991)
                     /locus_tag="AC1PJC_002298"
     CDS             complement(410..>991)
                     /locus_tag="AC1PJC_002298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140327 - flippase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HIP6621252.1"
                     /translation="NQPKYALNTFFERGVIGTGVQRDFNILFMPVFSMNILLILFRPM
                     ITQLAIYRRAGDYNQFKQYQKRIVKMVVGLAVLVLVGGIVLGIPALNILYGTNLNKYW
                     LSFIITMLGGIASTFATICDNMLTVLRKQKYLVISFAISCLLSILISNPLVEYYGILG
                     AAIAFVSSMWTWFLISLVIYLKLQKHLNWEVQE"
BASE COUNT          366 a          192 c          133 g          300 t
ORIGIN      
        1 atacctataa tatagactat tgtattaaaa aggcgcccta tagtgaccat cataccatat
       61 gacggataaa tcaatttacc tacaactaaa ccaattagct gaggtgtact cattaacgat
      121 ttcagtgaaa aatcgataga taatttgtcc tttgaaaaat cacgaatttt ggtaaaaagg
      181 cttgaatatt ctgtagaatc aactgcatga atctccggtt ctgaatacgt aaaatctgct
      241 gcccgtaatt cattcattgc ctctgtatct ctacttgtcg gagaatcaaa taatatattc
      301 cacgacataa aagcatgtgt tgcttcatca ggaacctttg tcacaggcat aacaaatatt
      361 gaaattaaca aaaaggggat tgctaacctt aaaaataatt tttctatctt cattcttgta
      421 cttcccaatt caaatgtttt tgcaatttta gatatattac taaagaaatt aaaaaccaag
      481 tccacatcga actaacaaaa gcaatagctg cccccaatat tccataatat tctaccagtg
      541 gattagaaat caatatggac aataaacaag aaattgcaaa tgaaattacg agatactttt
      601 gcttcctcaa aacagtaagc atgttatcac aaatggttgc aaaggtactc gcaattcccc
      661 caagcattgt tataataaag ctgagccaat atttattaag attcgttccg tagagaatat
      721 ttaatgctgg aatccccaat actattcccc caaccaaaac taacacagct aatccgacaa
      781 ccattttaac gatacgcttc tgatattgtt taaattgatt atagtcccca gctcttctat
      841 atatagccaa ctgagttatc atgggtctaa acaaaatcaa caaaatattc attgaaaaaa
      901 caggcataaa taaaatgtta aaatctcttt gaacacctgt tcctataaca cctctctcaa
      961 aaaaagtatt gagagcatat ttaggttgat t
//
LOCUS       DBNFCX010000215          989 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.217, whole genome shotgun sequence.
ACCESSION   DBNFCX010000215 DBNFCX010000000
VERSION     DBNFCX010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 989)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 989)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..989
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.217"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..>989)
                     /locus_tag="AC1PJC_002299"
     rRNA            complement(<1..>989)
                     /locus_tag="AC1PJC_002299"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:15.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          223 a          297 c          222 g          247 t
ORIGIN      
        1 ttagtattgg tccgctacat gtgtcgccac acttccactt ccaacctatc tacctgatca
       61 tctctcaggg ctcttactaa cataaagtta tgggaaatct catcttgagg tgggtttcac
      121 acttagatgc tttcagcgtt tatcccgtcc ctacatagct acccagcgat gcctttggca
      181 agacaactgg tacaccagcg gtaagtccac tctggtcctc tcgtactagg agcagatcct
      241 ctcaaatttc ctacgcccgc gacggatagg gaccgaactg tctcacgacg ttctgaaccc
      301 agctcgcgtg ccgctttaat gggcgaacag cccaaccctt gggaccgact acagccccag
      361 gatgcgacga gccgacatcg aggtgccaaa cctccccgtc gatgtgaact cttgggggag
      421 ataagcctgt tatccccagg gtagctttta tccgttgagc gatggccctt ccatacggaa
      481 ccaccggatc actaagcccg actttcgtcc ctgctcgagt tgtagctctc gcagtcaagc
      541 tcccttatac ctttacactc tgcgaatgat ttccaaccat tctgagggaa cctttgggcg
      601 cctccgttac cttttaggag gcgaccgccc cagtcaaact gcccgtcaga cactgtctcc
      661 gatagggata acctatccgg gttagagtag ccataacaca agggtagtat cccaacagcg
      721 cctcagtcga aactggcgtc ccgacttcgt aggctcctac ctatcctgta catgtggtac
      781 agatactcaa tatcaaactg cagtaaagct ccatggggtc tttccgtcct gtcgcgggta
      841 acctgcatct tcacaggtac taaaatttca ccgagtctct cgttgagaca gtgcccaaat
      901 cattacgcct ttcgtgcggg tcggaactta cccgacaagg aatttcgcta ccttaggacc
      961 gttatagtta cggccgccgt ttactgggg
//
LOCUS       DBNFCX010000216          981 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.218, whole genome shotgun sequence.
ACCESSION   DBNFCX010000216 DBNFCX010000000
VERSION     DBNFCX010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 981)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 981)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.218"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(128..928)
                     /locus_tag="AC1PJC_002300"
     CDS             complement(128..928)
                     /locus_tag="AC1PJC_002300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HIP6621253.1"
                     /translation="MADHQDTLIYNIDKSIKKKADLIESNYFAYAIRAIMASVYLAIG
                     LAISVYTADKLNHIVPDLGKFSYALMFGWCLVMILYMNAELGTSNMMYMTSAIHRKVI
                     PTKTALKILATCIFFNFVGAVIVCYLLSLTLPYQHIDPHSYLLEATVAKLAKTPLTQF
                     VEGIFANIVVNIAVFVTMRMKDDAGRVISLIFIIFIFAFLGFEHVIANFSTFSLAFFS
                     NGGPVEGMNLLSVLSNFLFSGLGNYVGGGLLIGLLYSWLSDKSKLYVD"
BASE COUNT          341 a          178 c          192 g          270 t
ORIGIN      
        1 atgttcgttt gtatatatca aattttgtta tatattaaat atacacctac aaaaataaat
       61 tgtcaagtag atatacaaga taaaataaaa aaaatacggt tggaattcca accgtaatta
      121 gttcatatta gtcaacgtaa agttttgatt tatcgctcaa ccagctataa agaagaccga
      181 ttaagagacc accaccaacg tagtttccga gtcctgagaa taggaagttg ctcaacacac
      241 tcaaaagatt cattccttcg actggaccac cgtttgagaa gaaggcgagt gagaaggtag
      301 agaagttggc gataacgtgc tcaaagccaa ggaaggcgaa gataaagatg ataaagatca
      361 atgagataac acgacccgca tcgtctttca tacgcatggt aacaaacaca gcaatgttta
      421 caacgatatt ggcaaagata ccttctacaa actgtgtcaa tggtgtctta gcaagtttag
      481 caacagttgc ttctaacaag tagctatgtg gatcgatatg ttggtatggt aaggtcaaag
      541 acaagaggta gcagacgata accgcaccga caaagttgaa gaaaatacat gttgccaaga
      601 ttttcaaagc agtcttagtt gggataacct tgcggtgaat ggcagaagtc atatacatca
      661 tgtttgatgt accaagttca gcgttcatat acaaaatcat gaccaagcac cagccaaaca
      721 tcaaagcgta actgaatttt cctaaatctg gaacgatatg attgagcttg tcagccgtat
      781 aaacagagat agccagtccg attgctagat agacactagc catgattgca cgaatagcat
      841 aggcaaagta gttgctttcg atcaagtctg cttttttctt gatacttttg tcgatattat
      901 aaatcagcgt gtcttgatga tccgccatga taatcccctt tttcatattt gttttgtaaa
      961 ccatttttag aaagtaaaac g
//
LOCUS       DBNFCX010000217          978 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.219, whole genome shotgun sequence.
ACCESSION   DBNFCX010000217 DBNFCX010000000
VERSION     DBNFCX010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 978)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 978)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.219"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
BASE COUNT          369 a          123 c          170 g          316 t
ORIGIN      
        1 cagcatttaa tgaaggaata gtgaattatt taaattctag gccaattgtt aaaatgatga
       61 gcagtaaagc tacaaaaaaa tatcttgaag aacagacaaa atatcttgat tgagactggt
      121 tatttgaaga aaatgtaaaa aaagtaatac gtaaaaatcc agatatgcta tataaagatt
      181 tttggaggaa ttttggaaga tgatttataa atttgggaga aatgcaaatt ttttagatac
      241 tacttcagtc ctagctttat tattaggcaa tcctgctcca acggaacaga tccaacaaat
      301 gcctctgaca ccatagaaag ttagtgtttt aatgagaaat attaaaagca agataagttt
      361 gggtaacaaa gtcactctct ctgaactatt atctaagata ccaagcaatg attacgactg
      421 gtaagttgta ctgtttatct aatcatattt tatatgaaga agagcagatt ggtgagtggg
      481 ctgatgattt acttaatatt atatattcaa ttggcagagc acctactagc ttaatagtag
      541 aaaaaatgtt accggaatac ataatccaag taagtatcaa ctgacgagta aagccactta
      601 tcaaggaaaa ataatcgaac aaaaagggat atcgacatag tctttttgat ttaagaataa
      661 ttttaaattt taaggtactt caagaagagt tcggatttga ttcatatttt catgaaacac
      721 tgtatcagat atatttatcc ggtcacctcc ctgtagggct acgaaagaaa ttatcctaac
      781 ggtacatttt atgtaatgaa ctcacaatct gagtcaactg aggaatagtt ttagtatctt
      841 ttgaaatcat ctagaatttt ctaggtgatt tctttttggt atggtagaat aaatgtgtag
      901 atttttgaaa actttatacc ataccaataa ttatatttga taaagtagat ataataggag
      961 attgatatga aatatgaa
//
LOCUS       DBNFCX010000218          968 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.220, whole genome shotgun sequence.
ACCESSION   DBNFCX010000218 DBNFCX010000000
VERSION     DBNFCX010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 968)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 968)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..968
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.220"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..747)
                     /locus_tag="AC1PJC_002301"
     CDS             complement(<1..747)
                     /locus_tag="AC1PJC_002301"
                     /inference="COORDINATES: protein motif:HMM:NF040237.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KxYKxGKxW signal peptide domain-containing
                     protein"
                     /protein_id="HIP6621254.1"
                     /translation="MSNNFSKIQGRFRMWKSGKRWLYAGAIVILASVGLAVGGNKILG
                     PNGNANEQRLSMVDIGDSKRNLPTSDSVEPYLSDLSGNNDNRQISGESGERYLSGLSG
                     NNSGHRLLGASGEGHVTLEKLPDISKEGLHIPELPQHSPELGGSNRTPLPGLEGDDRT
                     GDSGLSGRNRTPLPDLEGEGHVTLEKLPDISKEGLHIPELPQHSPELGGSNRTPLPGL
                     EGDNHTGDSDLSGRNHTPLPGLEGEGHVTLE"
BASE COUNT          270 a          228 c          171 g          299 t
ORIGIN      
        1 ttcaagagtg acatgacctt caccttccaa acctggaagt ggagtatgat tacgaccgct
       61 taggtctgaa tcacctgtgt ggttatcacc ttctaagcct ggaagtgggg tacgattgct
      121 accacccaat tctggtgagt gttgtggcag ttcaggaata tggaggccct cttttgaaat
      181 atctggaagt ttttcaagag tgacatgacc ttcgccttcc aaatctggaa gtggagtacg
      241 attacgaccg cttaggcctg aatcacctgt gcggtcatca ccttctaagc ctggaagtgg
      301 agtacgattg ctaccaccca attctggtga gtgttgtggc aattcaggaa tatggaggcc
      361 ctcttttgaa atatctggaa gtttttcaag agtgacatga ccttccccac ttgcgcctag
      421 aagacggtga ccgctattat taccacttaa tcctgacaag taacgctcgc cactctcacc
      481 tgaaatctgt cgattatcat tattaccgct caagtctgat aagtatggtt ccacgctatc
      541 gctcgttggc aaattcctct tactatcacc tatatctacc atggacaatc gctgttcatt
      601 tgcatttcca tttggtccta agattttatt tcctcccaca gctagaccta ccgacgctaa
      661 tatgacaatc gctcctgcat aaagccatcg tttccctgat ttccacatcc tgaaacgacc
      721 ctgaatttta gaaaaattat ttgacatctg tgattacacc tttctaactc ctttttatat
      781 tcacaaaaac gtacgttatt catttgtact ggataatttt atcaaaaaaa catccagtaa
      841 aaagtctctt gcagcaaaaa atagataaaa attatccaaa aaatacgaac gttttacctt
      901 tcaacctcaa actgtgcaca ataaaaaagc catcattttt gatgactttt ctcttaattg
      961 ttctgact
//
LOCUS       DBNFCX010000219          964 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.221, whole genome shotgun sequence.
ACCESSION   DBNFCX010000219 DBNFCX010000000
VERSION     DBNFCX010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 964)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 964)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..964
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.221"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..>964
                     /locus_tag="AC1PJC_002302"
     CDS             <1..>964
                     /locus_tag="AC1PJC_002302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GBS Bsp-like repeat-containing protein"
                     /protein_id="HIP6621255.1"
                     /translation="KRTLLFLSLCASALNAQLVQADVVNAPSSQVSSSQVAETGGQLS
                     VVDEAGQIKAILSNIQGEIIGVTAQFSSETNSGITVTFSMDEQGRYVAVLDRSAFAEE
                     DQVFSLKLTAQLTDGSFQTLSDYSFEWKKDVVSAAEKPTTLDNSDATPSKIEVEATST
                     ATSSTVNSSLTAGATSSTSNSLTRSSSNTIAGSSNGSTSVPSARVSTASSSVNVTQPT
                     GTITIENRNDAQGTFDVRVTNISSPKDIASVILPTWSQSDDLRWYEAKRQADGSYKLT
                     VNKKDHKYRTGTYTVHLYYKDSSGGLTGAGGTTTHLSEVKPTGT"
BASE COUNT          285 a          195 c          222 g          262 t
ORIGIN      
        1 aaaaaagaac gttgttattt ctttctttgt gtgcatccgc gttgaatgct cagcttgttc
       61 aagcggatgt ggtaaatgcc ccatctagtc aagtttcttc gtctcaggtt gctgaaactg
      121 gcgggcaact atctgtcgtt gatgaggctg gtcagattaa agctattcta tcgaacattc
      181 aaggggaaat tattggtgtt acagcccagt ttagctctga aacaaatagc ggcattactg
      241 tcaccttctc aatggatgag cagggtagat acgtagcggt tttggatcgg tctgcatttg
      301 cggaggaaga ccaagtcttt tcgctgaagt taacagcaca attaacagat ggaagttttc
      361 agaccttatc agattatagt ttcgagtgga agaaggatgt cgtaagcgcg gctgagaagc
      421 ctactacttt ggataatagt gatgcaactc cgtctaaaat tgaggtggaa gcaacttcga
      481 ctgctacaag ctcgacggtt aattctagtt tgacagcagg tgcaacaagt agtacctcga
      541 attcgctgac aagaagttct tcaaatacga ttgcaggaag ttcgaatggc tctacaagtg
      601 ttccaagtgc tcgagtcagt acagcttcca gttcggtcaa tgttacacaa cctacaggca
      661 ccatcacaat tgaaaatcgt aacgatgccc aaggtacctt cgatgttcgt gttactaata
      721 tttcatcacc gaaagatata gcaagtgtta tcttacccac ttggtcccag tcagacgatt
      781 tacgctggta tgaagcaaag cgtcaagcag acggaagtta taaattaact gtcaataaga
      841 aagatcataa ataccgcaca ggtacctaca cggttcactt atattataag gactcaagtg
      901 gtggcctaac aggtgcaggt ggaacaacga ctcatttatc agaagtgaag ccaacaggta
      961 ccat
//
LOCUS       DBNFCX010000220          937 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.222, whole genome shotgun sequence.
ACCESSION   DBNFCX010000220 DBNFCX010000000
VERSION     DBNFCX010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 937)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 937)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.222"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            94..>937
                     /locus_tag="AC1PJC_002303"
     CDS             94..>937
                     /locus_tag="AC1PJC_002303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HIP6621256.1"
                     /translation="MRVVFGIDVSKASSEVAILVNGEKVHGYTMSNDAIGFSRLLGDL
                     KTVHKPEIIFEATGVYSRHLQTFLDEHGYAYTRLNPLEAKKQLDSLRVRKTDQIDAEK
                     LAQSQFVLNRKTTYVQKEVYQNLRDLSRFYQNLTEDIVRAKNRLHKALQVTFPELENI
                     LSTPTGEQYWNLVIAFPCKDFVLDLSKDELSESIRQSTSKRISDKRVAYLAEKLIALA
                     NQSYCAVKKNSPMLEEVRYYTKELLRLSEQRQAVLDEMVELAQPLPEYDILLSIPGIA
                     ETTAT"
BASE COUNT          300 a          204 c          197 g          236 t
ORIGIN      
        1 agaatgttat caaagtatgt gggacgccag acgtcgagta ttgaaaatga catcactaaa
       61 acaaggaatc attcaagaca aagaggtaat atcatgcgag tagtatttgg gattgacgtg
      121 agtaaggcaa gttcagaagt agccattcta gtcaacggcg agaaagttca tggctatacc
      181 atgtccaatg atgccattgg cttttctcgg ctacttggcg atttgaaaac cgtccacaag
      241 ccagaaatca tctttgaagc aacaggcgtc tattctcgtc atcttcaaac ttttctggat
      301 gaacatggct acgcttatac acgactcaat cccttagaag ccaagaagca actggatagc
      361 ttgcgtgtga gaaaaacaga tcaaattgac gccgaaaaac tagctcaatc tcagtttgta
      421 ctgaatcgta aaacgacgta tgtccaaaaa gaagtctacc aaaacttgcg ggatctcagc
      481 cgtttctatc agaatctgac cgaggacatt gttcgagcta aaaaccgcct gcacaaggcc
      541 ttacaggtca ctttccctga attggaaaat atcttgtcaa caccaactgg tgaacaatac
      601 tggaacctgg tcatagcttt tccttgcaag gacttcgtgc ttgatttaag caaggacgaa
      661 ctctcagaaa gcattcgtca atctacttca aaacggattt cggacaagcg tgtagcgtac
      721 ttagccgaga agctgatagc actagctaat caatcgtatt gtgccgtcaa gaaaaactct
      781 ccaatgctgg aagaggtccg ttactataca aaagaattgc ttagactttc tgaacagaga
      841 caggcagtct tagacgaaat ggtggaacta gctcagccat tacctgaata tgacattctg
      901 ctctctattc ctggaatagc tgagactact gcaacaa
//
LOCUS       DBNFCX010000221          926 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.223, whole genome shotgun sequence.
ACCESSION   DBNFCX010000221 DBNFCX010000000
VERSION     DBNFCX010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 926)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 926)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..926
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.223"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..790
                     /locus_tag="AC1PJC_002304"
     CDS             <1..790
                     /locus_tag="AC1PJC_002304"
                     /inference="COORDINATES: protein motif:HMM:NF024700.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HIP6621257.1"
                     /translation="SSLRDRCESFYLQYKKLNRSARDLRIYTKCFHNSEIFMSIGETN
                     LISVLSYINEAFGEPDFSNWVMVIDEIESGLHLEWSRQLVKFLVDWVNKKTDETIKEG
                     RNYPTFQFIFTTHSPFMLSDIKPGNVVALKKNMETGLSEVQPNQNTFAKNIQEIMHDD
                     LFIQEIYGEFALKKINQIIDQLQSEDEMLTKEPADLLKEINFISEPLLREKLIEMYNE
                     KFPDGCTKFQNINVNQIKEYFESLTQEEQEKFLEATQLRREMFK"
BASE COUNT          335 a          117 c          168 g          306 t
ORIGIN      
        1 ctctagttta agagatcgtt gtgaatcatt ctaccttcaa tacaaaaaac taaacagaag
       61 tgcgagggat ttgcgaatct atacaaagtg ttttcataat tctgaaattt tcatgtcgat
      121 aggtgagaca aatttaattt ctgtcttgtc ttatattaat gaagcttttg gtgagccaga
      181 tttttcaaac tgggtgatgg ttattgatga aattgaatcg ggattacatt tagagtggtc
      241 acgtcaactg gtgaaatttt tagttgattg ggttaataag aagacagatg aaacaatcaa
      301 agaaggcaga aattatccca ctttccagtt catttttaca acccattctc cattcatgct
      361 ttcagatatt aagcctggta atgtagttgc attaaagaaa aatatggaaa caggcttatc
      421 agaagtacaa cctaatcaga ataccttcgc aaaaaacatt caggaaatta tgcatgatga
      481 cttgtttatt caggaaatat atggagaatt tgcacttaaa aagattaacc aaattattga
      541 tcagctacaa tcagaagatg aaatgttaac taaagaacca gcagatttgt taaaagaaat
      601 taattttata agtgagcctt tgttacgtga aaaattaata gaaatgtata atgaaaagtt
      661 tcctgatgga tgtactaaat tccaaaatat taatgttaat cagatcaaag aatattttga
      721 gagtttgacg caggaagaac aagaaaaatt tcttgaagca actcagttgc gcagagaaat
      781 gttcaagtga attttataat tcttcattta tagttgttct gtataaatgg ggacagatta
      841 tttaatattt tagatatcca caatagtgag aatattggtt ttactttatc ttgtttggat
      901 cagaaaaaga cttggatgtt ggatat
//
LOCUS       DBNFCX010000222          893 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.224, whole genome shotgun sequence.
ACCESSION   DBNFCX010000222 DBNFCX010000000
VERSION     DBNFCX010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 893)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 893)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..893
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.224"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..>893
                     /locus_tag="AC1PJC_002305"
     CDS             <1..>893
                     /locus_tag="AC1PJC_002305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018378354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RHS repeat domain-containing protein"
                     /protein_id="HIP6621258.1"
                     /translation="GTTSALTYDAAHHVIEIVHRDKKGKLISSYAYEYDDGNYIDKET
                     ITQDGETLVQTYTYDSLGQIVKMTVSSKDGKELSQFSYTYDHAGNKLTSTETVDGKES
                     KTEFSYDVENRLLEMKSGDKTITYTYDKNGNRVSSGAGDAKLDYIYDTENRLLAVKDK
                     EGLLFAALYDGDDNRVFTASRTQATNTYQLFKRKPADKKRKSPYTAPDGEANSLFWYG
                     FTQNVVQFFSGFTTSEGYDWIETFDTVSTAYHQKVAKDRATEEGLVVNPPSEDNLPGE
                     DEVLYRSQVQDVLIPYTTKED"
BASE COUNT          258 a          225 c          232 g          178 t
ORIGIN      
        1 cggcacgaca agtgctctga cctacgatgc agcccatcat gtgatagaga ttgttcatcg
       61 tgacaagaaa ggcaagctga tttccagcta tgcctacgag tacgacgatg gcaactacat
      121 cgacaaggaa accatcacgc aggatgggga aactctggtc caaacttaca cctacgatag
      181 tctagggcaa atcgtcaaga tgaccgtttc aagtaaggat ggcaaggaac taagtcagtt
      241 tagctacacc tatgaccatg caggaaacaa gctgaccagc acggaaacgg tggatggtaa
      301 ggaaagcaag acagagttta gctatgacgt tgagaatcgc ctgcttgaaa tgaagtctgg
      361 cgacaagact atcacctaca cctatgataa gaacggcaac cgtgtgtcat cgggtgctgg
      421 tgatgccaag ttggactata tctatgacac ggaaaatcgt ctcttggcgg tcaaggataa
      481 ggaaggtctg cttttcgctg ccctctatga tggggatgac aaccgtgtct tcaccgccag
      541 caggacccaa gcgaccaaca cctaccagct cttcaagcgc aagccagcgg ataagaagcg
      601 caagtctccg tatactgcac cagatggcga agccaacagt ctcttctggt atggcttcac
      661 gcagaatgtc gttcagttct tctcgggctt cacgaccagc gagggctatg actggatcga
      721 gaccttcgat accgtctcaa ctgcctacca tcagaaggta gccaaggacc gagcgacgga
      781 agaagggctt gtggtcaatc caccaagcga ggacaaccta ccgggtgaag acgaggtgct
      841 ctacaggagt caagtgcagg atgtcctcat cccttacacg accaaggaag aca
//
LOCUS       DBNFCX010000223          852 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.225, whole genome shotgun sequence.
ACCESSION   DBNFCX010000223 DBNFCX010000000
VERSION     DBNFCX010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 852)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 852)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.225"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            14..841
                     /locus_tag="AC1PJC_002306"
     CDS             14..841
                     /locus_tag="AC1PJC_002306"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HIP6621259.1"
                     /translation="MKLISWNIDSLNAALTAESPRALLSRAVIDTLVTEDADIIAIQE
                     TKLSDKGPTKKHLEILESYFPGYANTWRSSVEPARKGYAGTLFLYKNHLSPTITFPEI
                     GAPTTMDSEGRIITLEFDDFYVTQVYTPNAGDGLKRLADRQIWDVQYADYLAKLDSHK
                     PVLATGDYNVAHKEIDLANPASNRQSPGFTDEERQGFTNLLAKGFTDTFRHLHGDVLN
                     AYTWWAQRSRTSKINNTGWRIDYWLVSDRIADKVSKSDMIDSGARQDHTPIVMEISF"
BASE COUNT          254 a          201 c          173 g          224 t
ORIGIN      
        1 gaaaaggaaa attatgaaac tcatttcttg gaatattgat tctcttaacg ctgcattgac
       61 tgcagagtct cctcgcgccc tattatcacg cgcagtcatc gatacacttg tgactgaaga
      121 cgctgatatt atcgccattc aggaaacaaa attgtcagat aagggaccga ctaaaaagca
      181 tctagaaatt ttggaaagct acttccctgg atatgccaat acctggcgtt catctgtaga
      241 accagctcgc aaaggctatg ctggtacgct cttcctctac aaaaaccatc taagtccaac
      301 cattaccttc cctgagattg gtgctccaac aaccatggat tctgaagggc gtatcattac
      361 gctagaattt gatgacttct atgtcacaca agtttatacg ccaaatgctg gtgatggctt
      421 gaaacggctt gctgaccgtc aaatctggga tgtacagtat gctgactact tagcaaaact
      481 tgatagccac aaacctgttc ttgcaacagg tgactacaac gttgctcaca aggaaattga
      541 ccttgctaat cccgcaagta accgtcaatc tccaggattt acagatgaag aacgtcaagg
      601 ttttacaaat cttctagcaa aaggttttac agataccttc cgccacttgc acggtgatgt
      661 tctcaacgcc tatacttggt gggcacaacg tagccgcacc agtaaaatca acaacacagg
      721 ctggagaatt gattactggc ttgtcagcga ccgcatcgcc gacaaagtaa gtaagtcaga
      781 tatgattgac tccggtgctc gtcaggacca tacaccaatt gtgatggaga tttcattcta
      841 acagtggata tt
//
LOCUS       DBNFCX010000224          815 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.226, whole genome shotgun sequence.
ACCESSION   DBNFCX010000224 DBNFCX010000000
VERSION     DBNFCX010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 815)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 815)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.226"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            62..475
                     /locus_tag="AC1PJC_002307"
     CDS             62..475
                     /locus_tag="AC1PJC_002307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6556 family protein"
                     /protein_id="HIP6621260.1"
                     /translation="MNTRKNTNKKPAGLTNFQKYLTFIGSILGIITACITIYTFTAKP
                     ATSSTSPSTTISSSSDTSPSQSSSDNPLTEVQDLTSSSSETTPSTQTETSSSVESTAS
                     SSSTETSATQASETRTETSTDTEVTSGASEITSNQ"
     gene            536..>815
                     /locus_tag="AC1PJC_002308"
     CDS             536..>815
                     /locus_tag="AC1PJC_002308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621261.1"
                     /translation="MKYVILKTPIFVWLLIFALIQIFALSSFLPEPFDTRSLLPMGVL
                     TGCSIRVSSEVKDQDGQYAPFKYLWWVILGWTVIGILFGITIKAPLELH"
BASE COUNT          258 a          185 c          135 g          237 t
ORIGIN      
        1 tttcggcaat ctttaagata gttttaaact tcctatctta aactaaaggt ggaggtacat
       61 catgaataca cgtaagaata caaataaaaa accggctggt ttaactaatt ttcaaaaata
      121 tttaaccttt atcgggtcta ttttagggat tatcactgcc tgcatcacta tctacacctt
      181 tacagcaaaa cctgcaacat cctcaacatc tccaagtact accatttcat catccagcga
      241 cactagcccc agccaatcat ccagcgacaa tccgttaaca gaagtacaag atttaacaag
      301 ttcaagctcc gaaacaacac cctcaaccca aaccgagacc agctcttcag tagagtctac
      361 tgcctcttcc tcgtctacag aaacatctgc tacccaagct tcggagacaa ggacagaaac
      421 cagtactgat acagaggtaa ctagtggggc atccgaaata acttctaatc aatagcacaa
      481 aaatatttgt attactttct tggatttgat atactaattt caggaggtgt gcaatatgaa
      541 atacgtcatt ctaaaaacac cgattttcgt ttggctactg atttttgcgc ttatacaaat
      601 cttcgcctta tcgtcatttt taccagaacc atttgatact cgttcattgc tccccatggg
      661 agtattgacc ggttgttcaa tcagggtttc cagtgaagtt aaagaccagg atggtcagta
      721 tgctccattt aagtacttat ggtgggtgat actaggatgg actgtaatcg gtattctatt
      781 tggtatcact ataaaagcac cactagaatt gcaca
//
LOCUS       DBNFCX010000225          810 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.227, whole genome shotgun sequence.
ACCESSION   DBNFCX010000225 DBNFCX010000000
VERSION     DBNFCX010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 810)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 810)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.227"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(53..>810)
                     /locus_tag="AC1PJC_002309"
     CDS             complement(53..>810)
                     /locus_tag="AC1PJC_002309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621262.1"
                     /translation="QSTYKQPTFYDFHGEFYMKGAIRTYLYHTNSWYELSKQSYYLLL
                     FFQKLWDEKQEVEASWQNGRMQIRLVVEEEGWQVHYRFPDNQAREVERLLASGMLVAS
                     RSSRNFIKIRTSRFVAPYIALIKQRQLYRKKPSKAMLQWEKYQSQLIEIQRTYRLVEE
                     SAPQTFFGHWLNKVQLYLCSAIASYWEEVIEGVEWQEAREIKEQRKIEKPHNPIEDKW
                     KENIARRHKRKVDQLIGHDTLEKLRQLKTELDD"
BASE COUNT          197 a          193 c          150 g          270 t
ORIGIN      
        1 gaccagtcga gttctttccc gctcccattt attgaaggtt cgctataact tcttagtcgt
       61 ctaattctgt tttcagttgt cggagttttt ccaaggtatc atgtccaatc agttggtcca
      121 cttttcgctt atggcgtcta gcaatatttt ccttccattt atcttcaata ggattatgtg
      181 gcttctcgat tttcctttgc tctttgattt ctctagcctc ctgccactcc actccttcaa
      241 taacttcttc ccaatagctg gcaatggcag agcagagata gagttggacc ttattcaacc
      301 agtgtccaaa aaaagtttgc ggagcacttt cctccactag ccgataggtc ctttggattt
      361 caataagttg actttggtat ttttcccact ggagcatagc tttactcggc ttttttcgat
      421 aaagttgacg ctgtttaatt agagctatat acggtgcaac aaaacgactc gtccgtatct
      481 tgataaaatt tctggaggag cgactggcca ccagcatgcc tgaggccaat aggcgttcaa
      541 cttcccttgc ctgattatct ggaaaacggt aatggacttg ccacccctct tcttcaacca
      601 ctaagcgaat ctgcatccta ccattttgcc aactcgcctc cacctcttgc ttttcatccc
      661 ataacttttg aaaaaagaga agaaggtagt agctttgctt actaagttca taccaactgt
      721 tcgtgtggta aagataggtc cgaatcgctc ctttcatata aaattcgcca tggaaatcat
      781 aaaaagttgg ctgtttatat gtagattgtg
//
LOCUS       DBNFCX010000226          802 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.228, whole genome shotgun sequence.
ACCESSION   DBNFCX010000226 DBNFCX010000000
VERSION     DBNFCX010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 802)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 802)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.228"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..>802
                     /locus_tag="AC1PJC_002310"
     CDS             <1..>802
                     /locus_tag="AC1PJC_002310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621263.1"
                     /translation="IGGKNFSSELDIFSDQSTRVSYFDRYLDDVLYLLNKSRADVIVF
                     EDIDRFENNTIFAKIKELNVLVNNKRKIAKKSSKLMFLYLIRDDLFISKERTKFFDFI
                     IPVLPVITSSNSSDKLTTTLKEMGIKSGLADDFLFRISLYIDDMRLLNNICNEFYSYQ
                     LELTHDKTGEKNALDLDLEKIFAMIVYKNIFPKDFSELQNNQGFLYSLFNEKEVRRNK
                     KFEKIDREKLQLENELKRIQSEHIQDEIELYGTIFKIPNGRKVVSVNDQ"
BASE COUNT          296 a          104 c          141 g          261 t
ORIGIN      
        1 attggtggca aaaatttctc atcagagctt gacatttttt ctgatcagtc gacgagagtt
       61 tcctattttg acagatacct agatgatgta ttgtatcttt tgaataaatc aagagctgat
      121 gtcattgttt ttgaggatat cgatcgtttt gagaataaca ctatttttgc caagattaag
      181 gaactaaatg tattagtcaa caataagcga aaaatagcta agaaatcatc aaagttaatg
      241 tttctttacc tgatacgaga tgatttattc atttcaaaag aaagaactaa attttttgat
      301 tttatcatcc cagtccttcc agttattacg agttcaaact ctagcgataa gttgacaact
      361 actttaaaag aaatgggaat aaaatcagga ttagcggatg acttcctatt cagaatctca
      421 ctttatatag atgatatgag attgcttaat aatatctgta atgaatttta ttcttatcaa
      481 cttgaattaa cgcatgacaa gacgggtgag aaaaatgcat tggatcttga tttggaaaaa
      541 atatttgcaa tgattgtcta caaaaatatt ttcccgaaag acttttctga gttgcagaat
      601 aatcaaggtt ttctatattc attatttaac gaaaaagaag ttagaagaaa taaaaaattc
      661 gagaagattg atagagaaaa actgcaattg gagaatgaac tgaaaaggat tcagagtgag
      721 cacattcaag atgaaattga actctatgga acaattttta aaattccaaa tgggagaaag
      781 gttgtcagtg tcaatgatca at
//
LOCUS       DBNFCX010000227          796 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.229, whole genome shotgun sequence.
ACCESSION   DBNFCX010000227 DBNFCX010000000
VERSION     DBNFCX010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 796)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 796)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.229"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..313
                     /locus_tag="AC1PJC_002311"
     CDS             <1..313
                     /locus_tag="AC1PJC_002311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003046529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HIP6621264.1"
                     /translation="NQTLNYLISYTGLRNFSNYARKMLFKKFPIVLVFDETSFEDLIF
                     SLRRIKNNINQLARIAEKSQDLQALRAMTYSVQMIEKYEKSFLKYHKTKKARLLSKVD
                     E"
     gene            310..666
                     /locus_tag="AC1PJC_002312"
     CDS             310..666
                     /locus_tag="AC1PJC_002312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003046531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HIP6621265.1"
                     /translation="MKNRIKNIVKQVFLTEDENKRLLALMANEKESNFSAFARKKLFN
                     QEIESWTINFPEYEQLTERFIQIGRSINRIAKFSTQVGNISQQNFIELGQLITQLLDE
                     LEKGLSVNLKEKSTKH"
BASE COUNT          298 a          108 c          146 g          244 t
ORIGIN      
        1 gaatcaaacg ctaaactacc ttatcagtta tacaggttta aggaattttt ctaactatgc
       61 taggaaaatg ttatttaaga aattccctat tgttttggta tttgatgaaa cttcatttga
      121 agacttgata ttttctttga ggcgaattaa aaataatatc aatcagttag caaggatagc
      181 agagaaatct caggatcttc aagcattacg agctatgact tacagtgttc aaatgattga
      241 aaaatatgaa aaatcgttcc ttaaatacca taaaacgaaa aaggcgaggt tactatcaaa
      301 agtggatgaa tgaaaaatag aattaaaaat atcgtgaagc aagtcttttt gactgaggat
      361 gagaataaaa gattgttagc attaatggct aatgaaaaag agtcaaactt ttccgctttt
      421 gccagaaaaa aattatttaa ccaagagatt gaatcatgga cgattaattt tccagagtat
      481 gagcaactga cagagcgatt cattcagatt ggcagatcaa ttaataggat tgctaagttt
      541 tcaactcagg ttggaaatat ttcacaacag aattttatag aacttggtca gttgataact
      601 caattattgg atgaattgga aaagggactc tcagttaacc taaaagagaa gtctactaaa
      661 cattaaataa gtaaatgaaa tcgcaggaat ttatctgcgg ttttcttatg tccttctaaa
      721 aaatgattgt ctgacaatgt cagccaccgt gtctggcacg gggaatttag aattgatact
      781 aaaacataat tttagg
//
LOCUS       DBNFCX010000228          787 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.230, whole genome shotgun sequence.
ACCESSION   DBNFCX010000228 DBNFCX010000000
VERSION     DBNFCX010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 787)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 787)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..787
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.230"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..297
                     /locus_tag="AC1PJC_002313"
     CDS             <1..297
                     /locus_tag="AC1PJC_002313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018369038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HIP6621266.1"
                     /translation="KDIAQTIGISQPAYADWEKGKKKPTPDKLPTIAKIFNVSTDFLL
                     GNTNNKVEEDELADVEMLFRATSLNMTDEEKAIFKQELLDFMKERQKLFDEDKK"
     gene            309..512
                     /locus_tag="AC1PJC_002314"
     CDS             309..512
                     /locus_tag="AC1PJC_002314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017648198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HIP6621267.1"
                     /translation="MRLKELRIEKGITHKQLSDDIGVPVRTISRWENGKSDMLLKNAI
                     KLAEYFDVTMDEFVGSEQLLSIK"
     gene            529..>787
                     /locus_tag="AC1PJC_002315"
     CDS             529..>787
                     /locus_tag="AC1PJC_002315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621268.1"
                     /translation="MNNKSIIPYSRIDEEKVIFPSNEESAIIENYLGQIDKFHTLVRS
                     FHINNFNFHQILYHFTMHADDTLIRTNGLPSDDFIVINTLLI"
BASE COUNT          294 a          102 c          146 g          245 t
ORIGIN      
        1 aaagatatag ctcagacaat tggtatttcc caaccagcat atgcggattg ggaaaaaggt
       61 aagaaaaaac ctactcctga taaactacct acaatagcaa aaatttttaa tgtttctaca
      121 gattttcttc taggaaatac gaataataaa gtagaggaag atgaacttgc ggatgttgaa
      181 atgctttttc gtgcaacttc acttaatatg acagatgaag aaaaagcaat tttcaagcaa
      241 gaacttttgg actttatgaa agagcgtcaa aaactttttg atgaggataa aaaatagggg
      301 attgactttt gagattaaaa gagttgagaa tagaaaaagg gataactcat aagcagttat
      361 cagatgatat tggtgtgcca gttaggacaa tctcacgttg ggaaaatggt aagtctgata
      421 tgcttttaaa gaatgcaatt aaacttgcgg agtattttga tgtaacaatg gatgagtttg
      481 tgggttccga gcaactctta tcaatcaaat agtgaaaggt tagtatgaat gaataataag
      541 tcaattattc catattcaag aatagatgaa gaaaaagtta tctttccatc gaatgaagaa
      601 tcggcaataa tagaaaatta tctcggtcaa atagataaat ttcatacttt agtcagaagt
      661 tttcatatta ataacttcaa ctttcatcag attttatatc atttcactat gcatgctgat
      721 gatacactga ttaggacaaa tggtcttcct agtgacgatt ttattgtaat caatacttta
      781 ttgataa
//
LOCUS       DBNFCX010000229          762 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.231, whole genome shotgun sequence.
ACCESSION   DBNFCX010000229 DBNFCX010000000
VERSION     DBNFCX010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 762)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 762)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.231"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..682)
                     /locus_tag="AC1PJC_002316"
     CDS             complement(<1..682)
                     /locus_tag="AC1PJC_002316"
                     /EC_number="7.5.2.-"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012235.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6621269.1"
                     /translation="MVTKSSNFTYLVESSLDGIYDILTLDKADDFKEEFERRIDELLQ
                     VKLDSAVLNTEIATSVQLFTVFTTSFLLLSSHLYFTSSSILVFSNIVLLLLLLSTILQ
                     PLLTNLVSYYKSKYSLDFITFENAMIEKEVENQRIGIDTIETIELKQLSIKFDEKVVF
                     QNLSFTMEKGNIYLIEGDNGAGKSTLIKVLQGILSPTSGELCLNEKTFGTLKHTDITQ
                     YVSSYSNEY"
BASE COUNT          271 a          119 c          101 g          271 t
ORIGIN      
        1 tatattcgtt tgagtaacta ctaacatatt gtgttatatc tgtatgtttt aaagttccaa
       61 acgttttctc atttaaacat aattcacctg atgtgggact taaaatacct tgcaacactt
      121 ttattaatgt cgatttgccc gccccattat ctccttctat caaataaata tttccttttt
      181 ccattgtaaa ggataagttt tgaaaaacaa ctttttcatc aaatttgata gacaattgtt
      241 ttaattcaat tgtttcaatt gtgtcaatac caatacgttg attttccact tctttctcaa
      301 tcattgcgtt ttcaaaagta ataaaatcta gtgaatattt tgacttgtag taagagacca
      361 aattagttag aagaggttgt aaaatagttg atagtaacaa taacaataat acaatgttgg
      421 aaaaaactag tatggatgag cttgtaaaat ataaatgtga agacaataat agaaaactag
      481 ttgtaaaaac tgtaaatagt tggacagatg tcgcaatttc tgtgtttaac acagctgaat
      541 ctaattttac ttgcaacaac tcatcaattc tacgttcaaa ttcctcctta aaatcatcag
      601 ccttatcaag ggttaaaata tcataaatac catctaaaga actttctacc aaataggtaa
      661 aatttgaact tttagtaacc atgttacgtt gattattttc gacttctatc aaccgatacc
      721 tgttatatat aaaaaggaaa gtaagcgata caagtgtttc ca
//
LOCUS       DBNFCX010000230          751 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.232, whole genome shotgun sequence.
ACCESSION   DBNFCX010000230 DBNFCX010000000
VERSION     DBNFCX010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 751)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 751)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.232"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..587)
                     /locus_tag="AC1PJC_002317"
     CDS             complement(<1..587)
                     /locus_tag="AC1PJC_002317"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621270.1"
                     /translation="MNHSKIDEYGKIYTQRLARIFYSSNITLAKEILFKIEPISIDKY
                     NYFLEIEKLFIKFLENPKQEQFLIILQKISILKKDYLNDYKKYILGLVAGAIILDDQT
                     TLKNLIEEIYDSGKRPYRARQKLFFANIVNYLELVQNNQYLEIENKLRLIDSSPLPNH
                     YKNINLHNLKLSCSPAHVEFYLGGELKDNTFYFDPR"
BASE COUNT          249 a           97 c          112 g          293 t
ORIGIN      
        1 cgaggatcaa aataaaacgt attatctttc agctcaccac ctaaataaaa ttcaacatga
       61 gctggtgaac aacttaattt aagattgtgt aaattaatat ttttataatg attaggaaga
      121 ggggaactat caattaatcg caatttgttt tcaatttcta gatattgatt attttggact
      181 aattctaaat aattaactat gttagcaaaa aatagttttt gacgagctct gtagggacgt
      241 tttcccgaat cgtagatttc ttcgattaag ttcttaagag ttgtttgatc atctaaaatg
      301 atagctccgg ctaccaatcc aagaatatac tttttatagt cgttaaggta gtcctttttt
      361 aagatactaa ttttctgtag gataattaag aactgttctt gcttaggatt ctctaaaaat
      421 tttataaata atttctctat ttctaaaaaa taattatatt tatcaattga aataggttca
      481 attttaaata aaatttcttt ggcaagtgtt atattacttg aataaaagat tctagcaagg
      541 cgttgggtgt aaatttttcc atattcatct atttttgaat ggttcataaa ttcttctaag
      601 agctgacaat ctagtagtaa ggttttctct gttttaatca gagcctccaa aaatttttgg
      661 ttagatttaa ttgtctgaac ttgatcatga tttacattac gataggataa caaattatgg
      721 aacttcttgc tatgttttcg aaattgttct a
//
LOCUS       DBNFCX010000231          746 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.233, whole genome shotgun sequence.
ACCESSION   DBNFCX010000231 DBNFCX010000000
VERSION     DBNFCX010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.233"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            96..719
                     /locus_tag="AC1PJC_002318"
     CDS             96..719
                     /locus_tag="AC1PJC_002318"
                     /inference="COORDINATES: protein motif:HMM:NF033863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TipC family immunity protein"
                     /protein_id="HIP6621271.1"
                     /translation="MNKKMIYALSIAVFAIILLPLFLIFSKPRYSNVFEEIYQDEYHH
                     ATNSFLHTNSTLNKIPDMEENKSSGLFYGHISEQYRSEVLPLGVENISYSFNFPDDKS
                     EGGDMSINFRFMHSNGEIIDIYYVYKYNSDKLVQSIGIISEKRLTEYKQIMEYVQEKK
                     ISLSPYIRRSEELLRNKIIPDWLRVYPSRFSKNNWGNIEIVAENISD"
BASE COUNT          262 a           97 c          130 g          257 t
ORIGIN      
        1 atagagattt tacgataaca gattcagagt tttgtaaaga tttatttttc cattttggat
       61 gacaaattgt aaatttgcta atgaggtcat tatatatgaa taaaaaaatg atttatgctc
      121 tatctatagc agtattcgca atcatactat taccgctctt tttaatattt tcaaagcctc
      181 gatatagcaa tgtttttgaa gaaatttatc aagacgagta tcatcatgct acaaattctt
      241 ttttacatac gaattctact ttaaataaga ttccagatat ggaagaaaat aaatcaagtg
      301 gtttatttta cggtcatatt tcagaacagt atcgctcaga agttttacct ttaggggttg
      361 agaatatttc atacagcttt aacttcccgg atgataaatc agaggggggc gatatgtcca
      421 taaactttcg tttcatgcat agcaatggag aaattataga catatactat gtgtataaat
      481 ataattctga taaattggta cagtctatag ggattattag cgaaaaaagg ttaacagagt
      541 acaaacagat tatggagtat gtgcaagaga aaaaaattag tctttctcca tacattagaa
      601 gaagcgaaga attgttacgg aataagatta ttcctgactg gcttcgagtc tatcctagtc
      661 gtttctctaa gaataattgg ggaaatatag agattgttgc tgaaaatata tcggattagt
      721 agaatttaaa cttttgctaa tatttc
//
LOCUS       DBNFCX010000232          728 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.234, whole genome shotgun sequence.
ACCESSION   DBNFCX010000232 DBNFCX010000000
VERSION     DBNFCX010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 728)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 728)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.234"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..>728
                     /locus_tag="AC1PJC_002319"
     CDS             <1..>728
                     /locus_tag="AC1PJC_002319"
                     /inference="COORDINATES: protein motif:HMM:NF018196.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HIP6621272.1"
                     /translation="PVVKTGSVVARYVIEGTEDEIADDKSVKPTDTPVDEPYGDTPPA
                     TIEKNGKTYELVRTRTKEGDAPENGVVKEGEQTITYEYKEKVETPVVKTGSVVARYVI
                     EGTEDEIADDKSVKPTDTPVDEPYGDTPPATITKDGKTYELVRTRTNEGDAPSNGTVV
                     EGEQTITYEYKEKVETPVVKTGSVVARYVIEGTEDEIADDKSVKPTDTPVDEPYGDTP
                     PTTISFGGKTYTLVRTRTNDGDAP"
BASE COUNT          266 a          154 c          159 g          149 t
ORIGIN      
        1 ccagttgtta agacaggttc agttgtagct cgttacgtta tcgaaggaac agaagatgaa
       61 atcgcagatg ataaatcagt taaaccaacc gatacaccag tagatgagcc atacggtgat
      121 acaccaccag caacaatcga aaaaaatggt aagacttacg agcttgttcg tacacgtaca
      181 aaagaaggcg atgccccaga aaacggtgtt gttaaagaag gcgaacaaac catcacctac
      241 gagtacaagg aaaaagtaga aaccccagtt gttaagacag gttcagttgt agctcgttac
      301 gttatcgaag gaacagaaga tgaaatcgca gatgataaat cagttaaacc gaccgataca
      361 ccagtagatg agccatacgg tgatacacca ccagctacta tcacaaaaga tggtaagact
      421 tacgagcttg ttcgtacacg tacaaatgaa ggtgacgccc caagcaatgg tacagttgta
      481 gaaggtgaac aaaccatcac ctacgagtac aaggaaaaag tagaaacccc agttgttaag
      541 acaggttcag ttgtagctcg ttacgttatc gaaggaacag aagatgaaat cgcagatgat
      601 aaatcagtta aaccaaccga tacaccagta gatgagccat acggcgacac acctccaact
      661 acaatttcat ttggtggtaa gacttataca cttgtacgca ctcgtacaaa tgacggtgat
      721 gccccaag
//
LOCUS       DBNFCX010000233          708 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.235, whole genome shotgun sequence.
ACCESSION   DBNFCX010000233 DBNFCX010000000
VERSION     DBNFCX010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 708)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 708)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.235"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..269)
                     /locus_tag="AC1PJC_002320"
     CDS             complement(<1..269)
                     /locus_tag="AC1PJC_002320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621273.1"
                     /translation="MTKHEDFINSPIESVMMEALSAISSINTGIETYPLNEYLLKTIF
                     LQMTGFQEQKFKCIVWEMATEDFEFRRDFLRDYATQGFSTYDSKKS"
     gene            complement(266..>708)
                     /locus_tag="AC1PJC_002321"
     CDS             complement(266..>708)
                     /locus_tag="AC1PJC_002321"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621274.1"
                     /translation="IGDKNDNTIEIYISYEELFESNEQLPSGELPHSRYYQNLWDIIS
                     NSRLSKTSFESIIDCDMYYFGLIYLIIFEKKVIDSQNWPSIKEKLNKQISDYKAPYLD
                     KQGIPTYDHLKGVYSSYHQKNPSALKYLRERVEKSIEIYREYGL"
BASE COUNT          234 a          120 c           89 g          265 t
ORIGIN      
        1 gatttcttag agtcatatgt cgaaaaacct tgtgtggcat aatctcttaa aaaatctctt
       61 ctgaactcaa aatcctcagt agccatttcc caaacaatac atttaaattt ttgttcttga
      121 aaacctgtca tttgtaaaaa aattgtcttt agcaagtact catttaaagg ataagtttcg
      181 attcctgtat ttatagaact aattgcagaa agtgcttcca tcattacaga ttcaatagga
      241 ctgttaataa aatcttcatg tttggtcata gcccatactc cctataaatt tcaattgatt
      301 tctcaactct ctcacgtaaa tatttcaatg cagatgggtt cttttggtga tagctgctat
      361 atactccttt taaatgatca tatgttggaa taccctgttt atcaagatat ggagctttat
      421 aatcagaaat ttgtttattc agtttctctt taatactagg ccagttttgt gaatcaataa
      481 cctttttttc aaatattatt aaataaatta aaccaaagta atacatatca caatcaataa
      541 tagactcaaa tgatgttttg cttaatcgtg aattactaat tatatcccac aaattttgat
      601 agtatcttga atgaggtagt tcaccagagg gtagctgttc attactttca aacaactcct
      661 cgtaactaat ataaatttca attgtgttat catttttatc accaatta
//
LOCUS       DBNFCX010000234          697 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.236, whole genome shotgun sequence.
ACCESSION   DBNFCX010000234 DBNFCX010000000
VERSION     DBNFCX010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 697)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 697)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.236"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            23..211
                     /gene="rpmB"
                     /locus_tag="AC1PJC_002322"
     CDS             23..211
                     /gene="rpmB"
                     /locus_tag="AC1PJC_002322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008536053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HIP6621275.1"
                     /translation="MAKVCYFTGRKTVSGNNRSHAMNQTKRAVKPNLQKVTVLIDGKP
                     KKVWASARALKSGKVERV"
BASE COUNT          275 a          100 c          147 g          175 t
ORIGIN      
        1 atcaaatgag gaggaagata caatggctaa agtatgttat ttcactggtc gtaagactgt
       61 atcaggtaac aaccgttcac acgctatgaa ccaaactaaa cgcgcagtta aaccaaacct
      121 tcaaaaagta actgttttga ttgatggtaa acctaaaaaa gtttgggctt cagcacgtgc
      181 attaaaatca ggcaaagttg aacgcgtata ataacaaagt cgttagaaaa atctagcgac
      241 ttttgttttt ggaaaaaata gcctagatat aaagtcggag aggagcaaat tcgaccacta
      301 cataataaac aggaaagaat atcagctata tagctcttca cattgctgtt gaaaagttaa
      361 caaagaagga acgttgtcaa aaataaactg tgtattgatg tggaagattt ttccaagttc
      421 gaacatttaa acttggattg acaataggag ttgtacgaga gagcatatcc gtacgggttc
      481 tacaagaagg gaatcacgaa ctggaagaat agagagaata gaaagtgttt taaaaaaatc
      541 caaaaaatat caaaaaaccg gttgacaatt gccaaagtag atgatagaat aattgagttg
      601 tctcatgaag ggctagttaa cagaggaacg aaaaaaagtt tcgaaaaagt gttgacaaga
      661 ccatcagaag gtgatagaat aattgagttg tctcttg
//
LOCUS       DBNFCX010000235          693 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.237, whole genome shotgun sequence.
ACCESSION   DBNFCX010000235 DBNFCX010000000
VERSION     DBNFCX010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 693)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 693)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.237"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            119..442
                     /locus_tag="AC1PJC_002323"
     CDS             119..442
                     /locus_tag="AC1PJC_002323"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621276.1"
                     /translation="MNKLGKAVLGLALAGGLAFPMASASAEAICSRDDVLHHQNLTDI
                     QRKVLLDEKDVCLASQKAEAASLINKSDLSPRQKAKYLSLVEFGSSTEVLALINHFSG
                     LRSQF"
BASE COUNT          207 a          111 c          142 g          233 t
ORIGIN      
        1 gtggctggta tactagatag aagtattcta gttattacaa aagaaaaaat ttgtgatgcg
       61 caccacaaag gtaataattt tatcaaatct tatgttatat ttgaagagag gtaataatat
      121 gaataaactc ggtaaagcag ttttggggct agcccttgct ggaggtttag cttttcctat
      181 ggcttctgct tcggcggaag caatctgttc acgtgatgat gttttacatc atcaaaatct
      241 gactgatatt cagcggaaag tactactaga tgaaaaagac gtatgtcttg cttcgcaaaa
      301 agcggaggct gctagtctca tcaataagag tgatttgtct ccacgtcaga aagcaaaata
      361 cttatcgcta gtcgaatttg gtagtagtac agaggtttta gctctcataa atcacttttc
      421 tggactccgt agtcagttct gatatgatgt atctgatata gagacagtat tttatactct
      481 tcgaaaatca aaatcagacg ttgttgactt gatttgatga atttcagttc tatctgcatc
      541 tgcgtcgcct agtctgtttt tgattttcat tgagtagtaa ttgatatagt cgcatgttaa
      601 attgtttgaa actaggacag tagcgtccta gtatagaaat aagcaacgag gttcccccgt
      661 tgcttattgt atttattgct tagataacaa cta
//
LOCUS       DBNFCX010000236          682 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.238, whole genome shotgun sequence.
ACCESSION   DBNFCX010000236 DBNFCX010000000
VERSION     DBNFCX010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 682)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 682)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.238"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..655
                     /locus_tag="AC1PJC_002324"
     CDS             <1..655
                     /locus_tag="AC1PJC_002324"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621277.1"
                     /translation="YVNTNYPTLVKKVTPFMSSSNLTDKFGGIIDLGHLSVTTLSYYN
                     QFGNPGSWNGWAGDLASAFGAVQKVYNANKNSNLDAIARAFVGGSSPTTDVPKGVLVP
                     NDARNPFGYADMCSDADAIGLASMMKKEKVGNNRLSTTMSKYYNGLSSKRYNNYLSDL
                     GVVRNLSAIETAVNKVFSDFLGFPNYLAKIEAEIETTNAVQTATKKAFARYVYYSSK"
BASE COUNT          233 a           97 c          144 g          208 t
ORIGIN      
        1 atatgtaaat acaaattatc cgaccttagt taaaaaagta acaccattta tgtcttcatc
       61 taatcttacg gataaatttg gaggtataat tgatttgggg catttgtctg ttactactct
      121 tagttactat aatcaatttg gtaatcctgg ttcatggaat ggatgggcag gggatttagc
      181 tagtgcattt ggggcggttc aaaaagtata taatgcgaat aaaaatagta acttagatgc
      241 aattgcaaga gcatttgttg gaggctcatc acctacgact gatgtaccta aaggagtttt
      301 agttccgaac gatgcgagaa atccttttgg atatgcagac atgtgtagcg atgctgatgc
      361 aattggtttg gctagcatga tgaagaaaga aaaagttgga aataatcgtt tgtctacgac
      421 tatgtctaaa tattataacg gactaagtag caaacgctac aacaattatc tatcagattt
      481 aggtgtagtt agaaatctat ctgcaattga gactgcagtt aataaggtct tttcggattt
      541 tcttggtttt ccgaattatc ttgcaaagat tgaagcggag atagaaacaa ccaatgcagt
      601 tcaaacagca acaaaaaaag catttgctag atatgtctac tattcgtcaa aataaataag
      661 gaagtagaaa aagtagcgga ga
//
LOCUS       DBNFCX010000237          647 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.239, whole genome shotgun sequence.
ACCESSION   DBNFCX010000237 DBNFCX010000000
VERSION     DBNFCX010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 647)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.239"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(161..>647)
                     /locus_tag="AC1PJC_002325"
     CDS             complement(161..>647)
                     /locus_tag="AC1PJC_002325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621278.1"
                     /translation="IVRLCNFLSDKNISLYLIVGNDNFSKNSRIFNYYKLWKSLKKRG
                     LEVKNGLYSKEISLQKEDKIKFVGAIQIIDGTSVADVVNVLLNRLNSHLLLLPSGEDV
                     TEFLKYGCSRIISENSEYIKQIANRGGVVLFREGNFDDNHTGFLGFGTIPLIDEDLFG
                     V"
BASE COUNT          227 a          125 c           64 g          231 t
ORIGIN      
        1 atataacaag tatgtgtttc ataaataaca ttaaagacac aacttgccaa tacatttgca
       61 aatggagtat tttctctagg tgatgccgct atcaattcta ctctaaagtc tgagccatca
      121 aaaaattttc tatcaatatt atatgtcgac aagcctaatt ctaaacccca aacaaatctt
      181 catctattag tggaatagta ccaaatccta gaaaaccagt gtggttatca tcaaagtttc
      241 cttccctaaa taatactact cctcctctat ttgctatttg tttaatatat tcactgtttt
      301 cagaaataat tcttgaacag ccatatttta aaaactctgt cacatcctct cctgaaggta
      361 acaataacaa atgagaattt agtctattaa gtaaaacatt aacaacatca gctactgaag
      421 taccatctat gatttgaata gctcctacaa atttaatctt atcttctttt tgaagagaaa
      481 tctctttcga gtatagtcca tttttaacct ctaaccctct ctttttcaat gatttccaca
      541 gtttataata attaaagatt ctactatttt tgctaaaatt atcgttccct acaattaggt
      601 ataaactaat atttttatca cttaaaaaat tacaaagtct tacaatt
//
LOCUS       DBNFCX010000238          626 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.240, whole genome shotgun sequence.
ACCESSION   DBNFCX010000238 DBNFCX010000000
VERSION     DBNFCX010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 626)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 626)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.240"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(268..>626)
                     /locus_tag="AC1PJC_002326"
     CDS             complement(268..>626)
                     /locus_tag="AC1PJC_002326"
                     /inference="COORDINATES: protein motif:HMM:NF033863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TipC family immunity protein"
                     /protein_id="HIP6621279.1"
                     /translation="LKPEETVTVYMDDTKGFIFSYQHDFKNGRKLQINYIYDGVENVT
                     QSIVVIENDGSEKKTREEILDLLRDDDLDSTWLSRQSTYVWKTLLLSVWFEKGSHRYS
                     FDNIGNIQIVKSNILG"
BASE COUNT          204 a          119 c           90 g          213 t
ORIGIN      
        1 ttttattttt ttagaaaata gcagagctat ctagacagtt tccatctgat attttgttat
       61 caaaggtcta cacatttatt ttaacacaaa aaaagaaatc acctagaaaa agtctagatg
      121 atttcagaga ttacaaatag gaaaatttta tctgccttac tgatatttct tcaacacttc
      181 aaagaactca aggtaaatcg ttacatgagt atagagatat ttgacagagt aatagtatcg
      241 tagctaaaac gacaaactag ggtttcctca cccaaggata tttgatttga caatctgaat
      301 gttccctata ttatcaaagg aatatcggtg gctacctttt tcaaaccaaa ccgacagcaa
      361 caatgtcttc cagacatagg ttgattgtct actaagccat gtactatcaa ggtcatcatc
      421 tctcaacaag tctaatatct cttctcgagt ctttttttcg ctaccgtcat tctcaattac
      481 aacaatagac tgtgtgacat tctcaacgcc atcatatata taatttatct gtaatttcct
      541 accatttttg aagtcatgct ggtacgagaa aatgaaacct tttgtatcgt ccatatacac
      601 tgttactgtt tcttctggtt tgagta
//
LOCUS       DBNFCX010000239          625 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.241, whole genome shotgun sequence.
ACCESSION   DBNFCX010000239 DBNFCX010000000
VERSION     DBNFCX010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 625)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 625)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.241"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..>625)
                     /locus_tag="AC1PJC_002327"
     CDS             complement(<1..>625)
                     /locus_tag="AC1PJC_002327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HIP6621280.1"
                     /translation="DFELILAQPAHMKAIPGQKTDKKDAHWIAKLTRIGLLPRSFVPD
                     ETIQELRELTRQRKHYVESRNRETNRIHKILQSGGIKLTTYIEDIMGLSGRNLLQLLV
                     DGTPITPRIVHQSVYTSLKKKVPQLLEALDGYFSDHHRFMLKQSLEIYDFYQKQIELL
                     EERMNVYLSQYENHVEILDSIPGIDVITASVIISEVGVDMSQFPTSG"
BASE COUNT          179 a          134 c          130 g          182 t
ORIGIN      
        1 tgtccagatg tcggaaactg actcatgtca acaccaacct cagaaatgat aacagaagct
       61 gtaatgacat caatacctgg gatggaatcc aatatttcta catggttttc atattgtgat
      121 agatagacat tcattcgctc ttccaacaac tcaatctgct tctgataaaa atcataaatc
      181 tctaaggact gctttaacat aaagcggtga tggtcagaaa aatagccatc caaggcttcc
      241 agaagctgcg gcactttctt cttcaagctg gtgtaaactg attgatggac aatgcgaggt
      301 gtaataggcg tcccatcaac cagtagctga aggagattgc gaccagatag ccccataata
      361 tcttcaatat aggttgttag cttgatacca cctgactgaa gaattttatg gatacgattg
      421 gtttctcgat tacgactttc cacataatgt tttcgttgtc tggtcaactc cctcaattct
      481 tgaatggttt catcgggaac gaaactccga ggaagcagac caatccgtgt taatttggca
      541 atccagtgag cgtccttctt gtcggttttc tgacctggaa tagccttcat gtgggctggt
      601 tgagcgagta tcaactcgaa gtcat
//
LOCUS       DBNFCX010000240          622 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.242, whole genome shotgun sequence.
ACCESSION   DBNFCX010000240 DBNFCX010000000
VERSION     DBNFCX010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 622)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 622)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.242"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(25..>622)
                     /locus_tag="AC1PJC_002328"
     CDS             complement(25..>622)
                     /locus_tag="AC1PJC_002328"
                     /inference="COORDINATES: protein motif:HMM:NF026018.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="polysaccharide biosynthesis C-terminal
                     domain-containing protein"
                     /protein_id="HIP6621281.1"
                     /translation="FEFTYLILLFAVYTCMGLLLQPFIELYTKNYSDAELYSNVVYVV
                     LFTLIGLVQNFRIPGSTIHVAAGHFKETQSAAIIEATINLVFSLTLVPTFGIAGVLIG
                     TLMSYIYRTSYTIWYTNKYFFKGSLNKTISRAFRSVVISVMIIIPAFYLLTPRISSWS
                     DWFVSGIVLFLIAMFFIGGINVLFEFKVAKQLFKRIKR"
BASE COUNT          243 a          102 c           87 g          190 t
ORIGIN      
        1 agaaaaaaat tccatataaa agccctacct tttaatcctc ttaaataatt gttttgcaac
       61 tttaaactca aacaacacat ttattccacc tatgaaaaac attgctatca agaacaaaac
      121 aataccagaa acaaaccaat ccgaccatga agaaatacga ggagttaata aataaaaagc
      181 tggtatgata atcattactg agataactac agatctaaat gctcgtgaaa ttgttttatt
      241 taaactacct ttaaaaaaat atttatttgt ataccagatt gtgtagctcg tcctataaat
      301 ataagacata agtgttccta taagaactcc tgcaattcca aaggttggaa ctagtgtaag
      361 agaaaatact aaattgattg tggcttcgat aattgcagct gattgcgtct ctttaaagtg
      421 tccagctgca acatggatag tgctacctgg tattcgaaaa ttttgaacta gacctattaa
      481 tgtaaataat acaacgtata ccacgtttga gtatagttca gcatcgctat aattttttgt
      541 atacaattct atgaatggct gtagaagtaa tcccatacaa gtatatactg caaaaagtaa
      601 tattaaataa gtaaattcaa aa
//
LOCUS       DBNFCX010000241          606 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.243, whole genome shotgun sequence.
ACCESSION   DBNFCX010000241 DBNFCX010000000
VERSION     DBNFCX010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 606)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 606)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.243"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..>606
                     /locus_tag="AC1PJC_002329"
     CDS             <1..>606
                     /locus_tag="AC1PJC_002329"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621282.1"
                     /translation="YCNRNYVNVTEEKGEKGKRTYNSGTNNSQLDHFFSKSARAGGRK
                     YPIFALSFFNLIPSCYGCNNKKGSEDFELSPYDKRFRSDDLIIFNWQPQPNQKSPIFS
                     KDSITITCKVHEEFKKDFDYLNLEKNYQLHTDIVEELLWKKRIYTGTYKEKLVSNYKK
                     IGLDMSEINRAIVGNFIEEDDYGKRPLSKMMADIGKNIRLIG"
BASE COUNT          225 a           88 c          113 g          180 t
ORIGIN      
        1 ctactgtaat agaaactatg ttaatgtaac agaagaaaaa ggagagaaag gaaaaaggac
       61 ttataattct ggaacaaata atagtcagct agatcatttc ttttcaaaat cagctagggc
      121 aggaggtcgc aaatacccaa tttttgcctt gtcttttttt aatttaattc catcctgtta
      181 tggctgcaac aataagaagg gttctgaaga ctttgaactt tctccttatg ataaaagatt
      241 ccgaagtgat gatttaataa tttttaattg gcaaccacag ccaaatcaaa agtcccctat
      301 tttttctaag gactccatca caattacttg caaagttcat gaggaattca agaaggattt
      361 cgactatctt aatctagaaa agaactatca gctgcacaca gatatagttg aagaactatt
      421 atggaaaaaa cgcatctata ctgggacgta taaggaaaag ttagttagta attacaaaaa
      481 aataggactc gatatgtcag aaatcaatcg agccattgtt ggtaatttta tagaggaaga
      541 tgattatgga aaacgtccat tatctaagat gatggcggat attggaaaga atattagatt
      601 gattgg
//
LOCUS       DBNFCX010000242          600 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.244, whole genome shotgun sequence.
ACCESSION   DBNFCX010000242 DBNFCX010000000
VERSION     DBNFCX010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 600)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 600)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.244"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..501
                     /locus_tag="AC1PJC_002330"
     CDS             <1..501
                     /locus_tag="AC1PJC_002330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HIP6621283.1"
                     /translation="PFGVGKTTLANILHKRIENSYLYDPELLGDFLQHQLPQTVCPED
                     FQDYSVWRQITYKIVFDLAAKTDKIIIIPMTIYKKEYYQEIIQQLIKDKIPLEHYILL
                     ADKTTILERLDNRVNEDNIWAKKHLDVCLKAFESHIPGQRLNTDSLKPEEVAKEILML
                     SKFTVK"
BASE COUNT          217 a           93 c          101 g          189 t
ORIGIN      
        1 ccattcggtg tcggaaagac tactttagca aatatattac acaaacgaat agaaaactca
       61 tatctatatg atcccgagtt actaggtgat ttcttacaac atcaattacc tcagactgta
      121 tgtcctgaag attttcaaga ttattccgtt tggcgacaga ttacttataa aatagtattt
      181 gatttagcgg ctaaaactga taagattatt attattccca tgacaatcta taagaaagaa
      241 tattatcagg agattattca gcaattgata aaggataaga ttcctttgga acattatatt
      301 ttgttagctg acaaaacaac cattttagaa cgtttagaca atcgagtcaa tgaagacaac
      361 atctgggcca aaaaacatct tgatgtttgt ttaaaagctt ttgaaagtca tattccaggg
      421 caaaggttaa acacagacag tttgaagcca gaagaggttg cgaaggagat tctaatgctc
      481 agtaagttta ctgtgaaata atgtagattt ttgaaatttt gggcgtgaaa aaaatttcta
      541 gttataaaaa ttttttggtc atagctacaa tatccctaca cacatctttc cgaaaaacta
//
LOCUS       DBNFCX010000243          589 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.245, whole genome shotgun sequence.
ACCESSION   DBNFCX010000243 DBNFCX010000000
VERSION     DBNFCX010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 589)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 589)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.245"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            56..259
                     /locus_tag="AC1PJC_002331"
     CDS             56..259
                     /locus_tag="AC1PJC_002331"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621284.1"
                     /translation="MLSYTEAENILLNILNDYINGIEKKIILELIKSGSWKAAIYEID
                     KKKFKSLTQNDHQKLKEVFGLYC"
     gene            329..589
                     /locus_tag="AC1PJC_002332"
                     /pseudo
     CDS             329..589
                     /locus_tag="AC1PJC_002332"
                     /inference="COORDINATES: protein motif:HMM:NF026986.6"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          268 a           62 c           86 g          173 t
ORIGIN      
        1 gatagaacaa aaaatataaa ctttaaagat gtaacaataa taggagatta atttgatgct
       61 gagttacaca gaagcagaaa atattttatt aaatatttta aatgactata tcaatggaat
      121 cgaaaaaaaa ataattttag aattaattaa atcaggttca tggaaggcag caatatatga
      181 aattgataaa aaaaaattca aatcattaac ccaaaatgat catcaaaaat taaaagaggt
      241 ctttgggcta tattgctaga ttaataattg tacatcaaaa taaataggac ctgctattgc
      301 aaaactaacc tctcagtcaa gttatgacat tcctaaaaat gataagggtt atactaaatc
      361 aaatttaaaa ttgggtcaag atgtccataa agaatataag gtaaagaatg ttttaaaagg
      421 atatagagaa aaagagttta ctttaccaag tttgatttta ttgattttga aaataaaatt
      481 atccatgaat taaagcctaa caaccctaat caaattaaat tgggaaataa acaattacaa
      541 ggatatcttg atgaattaga agcaattaca gattataaat ggacaggga
//
LOCUS       DBNFCX010000244          574 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.246, whole genome shotgun sequence.
ACCESSION   DBNFCX010000244 DBNFCX010000000
VERSION     DBNFCX010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 574)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 574)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.246"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..>574
                     /locus_tag="AC1PJC_002333"
     CDS             <1..>574
                     /locus_tag="AC1PJC_002333"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621285.1"
                     /translation="TKDGKTYKLVPAGDYNVGTVGKDGNLTTTTKDLGVDAASGEVAE
                     GTKKVTYVYQEVKTGSVVIDYVDTEGNELQKQYVDSPEGTAVGTTYNAEGITGTTEKP
                     AVIEKDGKTYELVPAGTYTVGTVGEDNNLTATTTTLGVAPVTGTVVEGVTKITYVYKE
                     KVETPVVKTGSVVARYVIEGTEDEIADDKSV"
BASE COUNT          200 a           94 c          132 g          148 t
ORIGIN      
        1 ttaccaaaga tggtaagact tacaaattag tccctgctgg tgactacaat gtaggtactg
       61 ttggaaaaga tggaaacttg acaacaacta ctaaagattt gggtgttgat gctgcttcag
      121 gtgaggttgc tgaaggtact aagaaagtta cttatgtcta ccaagaagtg aaaactggtt
      181 ctgttgtaat tgattatgtt gatacagaag gtaatgaact tcagaaacaa tatgttgatt
      241 cgccagaagg aactgctgta ggtacaactt ataacgctga aggaatcaca ggtacaactg
      301 aaaaaccggc agttatcgaa aaagacggta aaacgtatga acttgttcct gcaggtactt
      361 atacagttgg tacagttggt gaagacaaca accttactgc aacaacgaca acacttggtg
      421 ttgctccagt aacaggtaca gttgttgaag gtgtaacaaa aatcacttac gtctacaaag
      481 aaaaagtaga aaccccggtt gttaagacag gttcagttgt agctcgttac gttatcgaag
      541 gaacagaaga tgaaatcgca gacgataaat cagt
//
LOCUS       DBNFCX010000245          565 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.247, whole genome shotgun sequence.
ACCESSION   DBNFCX010000245 DBNFCX010000000
VERSION     DBNFCX010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 565)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 565)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.247"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..200
                     /locus_tag="AC1PJC_002334"
     CDS             <1..200
                     /locus_tag="AC1PJC_002334"
                     /inference="COORDINATES: protein motif:HMM:NF033863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TipC family immunity protein"
                     /protein_id="HIP6621286.1"
                     /translation="GSEKKTREEILDLLRDDDLDSTWLIRQSTYVWETLLLSVWFEKG
                     SHRYSFDNIGNIQIVKSNILG"
     gene            344..>565
                     /locus_tag="AC1PJC_002335"
     CDS             344..>565
                     /locus_tag="AC1PJC_002335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621287.1"
                     /translation="MNLIKNKKNYFLCVLAIFLVLFITITCSRVFSNNVYYLGAEGRI
                     ELNIKGNYDNLDAYMTFEIASETKNGKIRL"
BASE COUNT          194 a           76 c          115 g          180 t
ORIGIN      
        1 acggtagcga aaaaaagact cgagaagaga tattagactt gttgagagat gatgaccttg
       61 atagtacatg gcttattaga caatcaacct atgtctggga gacattgttg ctgtcggtct
      121 ggtttgaaaa gggtagccac cgctattcct ttgataacat aggaaatatt cagattgtca
      181 aatcaaatat ccttgggtga ggaaaaacta gtttgtcgtt ttagctacga tactatcgct
      241 ctgtcaaata tctctatact catgtaacga tttaccttga gttctttgaa gtgttgaaga
      301 aatatcaata aggcagataa caaaatatca ggtggaaact gtaatgaatt taataaaaaa
      361 taagaagaac tactttctgt gtgttcttgc aatctttcta gtactattta ttactattac
      421 ttgctcaaga gttttttcaa acaatgtgta ttatttaggt gcagaaggga gaattgaatt
      481 aaatattaag ggaaactatg ataatcttga tgcatatatg acgtttgaga ttgctagtga
      541 gacgaaaaat ggaaagatac gacta
//
LOCUS       DBNFCX010000246          561 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.248, whole genome shotgun sequence.
ACCESSION   DBNFCX010000246 DBNFCX010000000
VERSION     DBNFCX010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 561)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 561)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.248"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..>561
                     /locus_tag="AC1PJC_002336"
     CDS             <1..>561
                     /locus_tag="AC1PJC_002336"
                     /inference="COORDINATES: protein motif:HMM:NF015210.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GmrSD restriction endonuclease domain-containing
                     protein"
                     /protein_id="HIP6621288.1"
                     /translation="KKLIASLKNKEFVPPVTIGSFTKNGVKENLLIDGQQRLTSILLS
                     VLGFFPDRETYKMHTKNKVRKYIDENDDFAGDTDSFTDVINWSFNDLLKEDNLTISKI
                     KSNLEKDKSFKALNNDDEIDRHFLKNTFLGFSYLVPNNTQRGDQQRYYSSVFRNINRQ
                     GMALTGQESREALYYLDDSKTDFFKP"
BASE COUNT          214 a           76 c           95 g          176 t
ORIGIN      
        1 aaagaaatta attgcttcac ttaaaaataa ggaatttgtt ccacctgtaa ctattggttc
       61 atttactaaa aatggtgtga aagaaaatct tctaattgat ggacaacaaa gactaacaag
      121 cattttattg tcagtgttag gattttttcc agatcgcgaa acctataaaa tgcatacaaa
      181 aaataaagtc agaaaataca ttgatgaaaa tgacgatttt gcaggtgaca ctgattcctt
      241 cacagatgta attaactggt cgtttaatga cttacttaaa gaagataatt taacgatttc
      301 aaaaataaaa tcaaatctag aaaaggataa atctttcaaa gcgttgaata atgatgatga
      361 aattgacaga cattttttga agaatacttt tttaggattc tcgtatctag tacctaataa
      421 tactcaaaga ggggatcagc aaagatacta ttcttccgtt tttagaaata ttaatcgaca
      481 ggggatggct ttgactggtc aagaaagtag agaggcactc tactatttag atgatagtaa
      541 aactgatttc tttaagcctg a
//
LOCUS       DBNFCX010000247          552 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.249, whole genome shotgun sequence.
ACCESSION   DBNFCX010000247 DBNFCX010000000
VERSION     DBNFCX010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 552)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 552)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.249"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..>552)
                     /locus_tag="AC1PJC_002337"
     CDS             complement(<1..>552)
                     /locus_tag="AC1PJC_002337"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621289.1"
                     /translation="TSILQKNVKKYFFVTNSNISTENIINIKTAITEISPEAVVHFIT
                     KTNLESWLKRNPKYIKEFFSSNISEKDIDISEVETTSTRFVEVTTINSYAIRNTNFSV
                     DYLSYNTRYRLSFSFFSYNDDIIEILPNNIGKYPWRIIDTSSLKEIPVNSGENHIQIE
                     FQIIPDDSYDASPNGSQNNSFIY"
BASE COUNT          189 a           68 c           95 g          200 t
ORIGIN      
        1 tcgtaaataa aagaattatt ctggctacca ttgggtgaag catcatagct atcgtcagga
       61 attatttgaa attctatttg aatatgattt tcaccggaat ttaccggaat ctccttaaga
      121 gaagaggtat caataattct ccagggatat tttcctatat tgttaggtaa aatttctatt
      181 atgtcatcat tgtaagaaaa aaatgaaaag gacaatcgat agcgtgtatt gtacgacagg
      241 tagtctactg aaaaattggt gtttcgaatg gcataggaat ttatcgtggt cacttcaaca
      301 aatctagttg aagtagtttc aacttctgat atatcaatat ctttttctga gatattagaa
      361 gaaaaaaatt ctttgatata tttgggatta cgttttaacc aactttctag atttgtttta
      421 gttataaaat gtacaaccgc ctcgggagaa atttcggtaa ttgcagtttt tatattaata
      481 atattctcag tagaaatatt cgaattagta acaaagaaat attttttaac atttttttgt
      541 aagatagaag tg
//
LOCUS       DBNFCX010000248          549 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.250, whole genome shotgun sequence.
ACCESSION   DBNFCX010000248 DBNFCX010000000
VERSION     DBNFCX010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 549)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 549)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.250"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..475
                     /locus_tag="AC1PJC_002338"
     CDS             <1..475
                     /locus_tag="AC1PJC_002338"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621290.1"
                     /translation="PFSSIVVLAEQNNEVSVYSDLSSGDVAILEAELEFYFKEVGYID
                     GNGVYQITNPNLLLEKAKSGDQNARKLYQGYIASLMRTPYDFAKCVVSDYFGIFIDIA
                     NGRLLDALAKDLQSEAWNRAAMTILKLLGKSTSKANVLATAAELAIAAYNCRGKW"
BASE COUNT          173 a           68 c          117 g          191 t
ORIGIN      
        1 accgtttagt tcaattgttg ttttagctga acaaaataat gaagtgtctg tatattcgga
       61 tttaagttcg ggagatgtag ctattttgga agctgagtta gaattttatt ttaaagaagt
      121 aggttacatt gatggtaatg gtgtttatca aattactaat cctaatttgc ttcttgaaaa
      181 agctaaatca ggagatcaga atgctcgtaa gctttatcag gggtatattg ctagtcttat
      241 gagaactcct tacgattttg ctaagtgtgt agtttctgat tattttggaa tatttataga
      301 tattgccaat ggtcgtttat tagacgcttt ggctaaagat ttacaaagtg aggcatggaa
      361 tcgagcggct atgaccatac ttaaattact tggaaaaagt acaagtaaag caaatgtttt
      421 ggctacagct gcagaattag ctattgctgc gtataactgt cgtggcaaat ggtgattttc
      481 tcaacaatat ttaaataaga ctgtaaaaaa acagctttgg cagattgaag aaatcgtctg
      541 tattggata
//
LOCUS       DBNFCX010000249          533 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.251, whole genome shotgun sequence.
ACCESSION   DBNFCX010000249 DBNFCX010000000
VERSION     DBNFCX010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 533)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.251"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..475)
                     /locus_tag="AC1PJC_002339"
     CDS             complement(<1..475)
                     /locus_tag="AC1PJC_002339"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621291.1"
                     /translation="MEISNEKDFEKYNNRQNIKIKNCSTKKIREGSGGSYGGGAITYY
                     EYDADHFPNYFLTFDELRKSKVIHSKNMLVQLSALLYRFEEKFPEHANESLIDKIFIN
                     YLFNIFDTEKLLYNAETRDRLKSGDITYYDFLAQWKSDVEAIEDYNIFISNFMEFI"
BASE COUNT          183 a           94 c           47 g          209 t
ORIGIN      
        1 caataaattc cataaaattc gaaataaaaa tattataatc ttcaatagcc tccacatcag
       61 atttccactg tgctaaaaaa tcataatatg taatatcacc tgattttaat ctatctcttg
      121 tctcagcgtt atataatagt ttctcagtat caaatatatt gaatagatag ttaataaata
      181 ttttatcaat taaactctca ttagcatgct caggaaattt ttcttcaaat ctatataata
      241 atgcactcaa ttgcaccaac atattcttgg aatgaataac ttttgatttt cttaattcgt
      301 caaaagttaa aaaataattt ggaaaatgat ctgcatcgta ttcataatat gtaatagccc
      361 ctccaccata actgcctcct gatccctctc taatcttttt tgtactacaa ttttttatct
      421 ttatattttg tctattatta tatttttcaa aatctttctc attgctaatt tccatggaaa
      481 tactatcgat aaagattttt tcatcatccg tgtagattga aaccattttt aca
//
LOCUS       DBNFCX010000250          512 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.252, whole genome shotgun sequence.
ACCESSION   DBNFCX010000250 DBNFCX010000000
VERSION     DBNFCX010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 512)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 512)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.252"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..>512
                     /locus_tag="AC1PJC_002340"
     CDS             <1..>512
                     /locus_tag="AC1PJC_002340"
                     /inference="COORDINATES: protein motif:HMM:TIGR04226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isopeptide-forming domain-containing fimbrial
                     protein"
                     /protein_id="HIP6621292.1"
                     /translation="TDPTVDKLVNNQVHADLPQRDEVFEYTINTQVPTDAKSFEITDE
                     LKDVLEFAGADGKGDVVVKIGDKDVTKESTVTVAGQQLSVQLSAAHLKDDAGKAVVVT
                     FKSKIRANVNLTGYLEEGSNTIKIPNTASISVDHKPKVDSKPVTVTPPTPNNPTIVKE
                     VNKKQHEDLT"
BASE COUNT          180 a          102 c          110 g          120 t
ORIGIN      
        1 actgacccaa cagtagataa gttggttaac aatcaagtcc acgcagatct tccacaacgt
       61 gatgaagtgt ttgagtacac tatcaatacc caagttccaa ccgatgcgaa aagcttcgaa
      121 atcactgatg aactcaaaga tgttctagag tttgccggtg cagatggtaa gggagacgtc
      181 gttgttaaga tcggtgataa ggacgtaacg aaagaaagca ctgttactgt agcaggtcaa
      241 caattaagtg ttcaattgag tgctgctcac ttgaaagatg atgccggtaa ggcagttgtt
      301 gtaaccttca agtctaagat tcgtgcaaat gtcaacttga caggctactt ggaagaagga
      361 agcaacacga ttaagattcc aaacacggca agcatcagtg ttgatcacaa acctaaggtt
      421 gattcaaaac cagtcacagt aaccccacca actccaaaca atccaacgat tgttaaggaa
      481 gttaataaga aacaacatga agatttgact aa
//
LOCUS       DBNFCX010000251          487 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.253, whole genome shotgun sequence.
ACCESSION   DBNFCX010000251 DBNFCX010000000
VERSION     DBNFCX010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 487)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 487)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.253"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..424)
                     /locus_tag="AC1PJC_002341"
     CDS             complement(<1..424)
                     /locus_tag="AC1PJC_002341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621293.1"
                     /translation="MTSLFLFYMKRDLKSFKTLIVSAVYFFITYLFIRYGDSVGKIFD
                     NSDGFAILKVMYAVFAFVGFLFGASLFSNIISQGISSRDFRFILPYKSRRVLYFSKFL
                     MSFVFFLLQILIATIVVLVFREDAVFSSQQFCNISIFYF"
BASE COUNT          220 a           84 c           59 g          124 t
ORIGIN      
        1 aaaaataaaa aatactaata ttacaaaact gttgggaaga aaaaacggca tcttctcgga
       61 acacaagcac aactatcgtt gcaatcaaaa tttgtaagag gaaaaagaca aacgacatta
      121 aaaactttga aaaataaagt acccgtcgag atttataagg taaaataaat ctaaaatccc
      181 tcgatgaaat cccttgagaa ataatattag aaaacagtga tgctccaaat agaaagccaa
      241 caaaagcaaa aacggcatac ataactttca aaattgcgaa accatccgaa ttatcaaaaa
      301 tttttccaac actatcccca tatcgaataa aaagataagt aataaaaaaa taaaccgccg
      361 agacaattaa tgttttaaag gattttaagt ctcgcttcat gtaaaataaa aatagtgagg
      421 tcaaatttat tctcctttca tataacatag tccattttac caaaaaacga attactctca
      481 acttttt
//
LOCUS       DBNFCX010000252          476 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.254, whole genome shotgun sequence.
ACCESSION   DBNFCX010000252 DBNFCX010000000
VERSION     DBNFCX010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 476)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 476)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.254"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..>476
                     /locus_tag="AC1PJC_002342"
     CDS             <1..>476
                     /locus_tag="AC1PJC_002342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000489002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HIP6621294.1"
                     /translation="VRLSNTKYGSVVVNYVDTEGNVIGTEFKDTTNQAEGTAYDTTAD
                     SGTVASDKTTERPSVITKDGKTYKLVAKDTTATVGTVKADGSLATNAGSFTFGTDTPT
                     GTVAEGTKSITYVYEEVKGSVIVDYVDTDGNKIGTQFVDTANVAPGTTYNTANDTGT"
BASE COUNT          165 a           91 c          106 g          114 t
ORIGIN      
        1 gttcgtttga gcaatactaa gtacggttca gtagtagtta actatgtcga tactgaaggt
       61 aacgtaatcg gtactgagtt caaagatact acaaaccaag cagaaggtac agcctacgat
      121 acaacggctg actctggaac agtcgcatca gataaaacaa ctgagcgtcc atcagtgatt
      181 accaaagatg gtaagacata caagttggtt gctaaagata caactgcaac agttggtaca
      241 gtaaaagctg acggtagctt ggctacaaat gctggaagct ttacattcgg tacagataca
      301 ccaacaggta cagttgctga aggtactaaa tcaatcactt acgtatacga agaagtgaaa
      361 ggttcagtta tcgttgatta cgttgataca gacggaaaca agatcggtac acagtttgtt
      421 gatactgcca atgtagcgcc tggtacaact tacaacacag caaatgatac aggtac
//
LOCUS       DBNFCX010000253          447 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.255, whole genome shotgun sequence.
ACCESSION   DBNFCX010000253 DBNFCX010000000
VERSION     DBNFCX010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 447)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 447)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.255"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..>447)
                     /locus_tag="AC1PJC_002343"
     CDS             complement(<1..>447)
                     /locus_tag="AC1PJC_002343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621295.1"
                     /translation="LKNSYIDETYADYLTYFYGNVLTKNDNFTTFGEPNDDASRTTTF
                     LEVIDFIFSNSLYVINKDNLRFFMWWFKGDTYFSEDDFKHKNFELLHTNDNYSPLLEY
                     SRLEIADYVYAYLDICEGTILDNSEYIVELLQRNEVYESVITYEEN"
BASE COUNT          161 a           84 c           52 g          150 t
ORIGIN      
        1 tcattctcct cgtatgttat aacagactcg taaacttcgt ttctttgaag tagttctaca
       61 atatattctg agttatctaa aatagtcccc tcacaaatat ctaaatatgc atagacatag
      121 tctgctatct ccaatctact atactctagt agcggtgaat aattatcatt tgtatgaagc
      181 agttcaaaat tcttatgctt gaaatcatcc tctgaaaaat aagtatcccc cttgaaccac
      241 cacatgaaaa atcttaaatt atctttattt atcacataca aactattact aaagataaag
      301 tcaataacct ccaagaaagt agtagttctg gaagcatcat cattaggctc tccaaaagta
      361 gtaaaattat cattcttagt taagacattg ccataaaaat aggtcaaata atctgcatag
      421 gtttcatcta tataagaatt tttcaat
//
LOCUS       DBNFCX010000254          440 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.256, whole genome shotgun sequence.
ACCESSION   DBNFCX010000254 DBNFCX010000000
VERSION     DBNFCX010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 440)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 440)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.256"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..>440)
                     /locus_tag="AC1PJC_002344"
     CDS             complement(<1..>440)
                     /locus_tag="AC1PJC_002344"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621296.1"
                     /translation="NVIGNIKAKIENLDKDILRQEALLGEIENVAKSWVAQKILERYP
                     IDEVSEQLQQYEEQQRANERYIEENKQWIQEVEPAGNLRPFADLLNHEFRVIGINIKC
                     QIDGNHYLLKHGTNPSITISTRDLSEGERRLIGFLHFYYDLYLE"
BASE COUNT          128 a           93 c           49 g          170 t
ORIGIN      
        1 ttctaaatat aaatcataat aaaaatgtaa aaaacctatt aaacgcctct ccccttcact
       61 taaatccctc gtactaatag ttattgaagg gttagttcca tgctttaaca aataatgatt
      121 tccatcaatt tgacatttta tatttatccc aataactcta aattcatgat tgagtaagtc
      181 tgcaaatggc cgtaagtttc ctgctggctc aacttcctga atccactgtt tgttctcttc
      241 aatatatcgt tcattagctc tttgttgttc ctcatactgt tggagttgtt cactaacttc
      301 atcaatagga tatcgctcca atattttttg agcaacccat gactttgcaa cattttcaat
      361 ttcacctaat agagcctctt gtcttaatat atctttatca agattttcta tcttcgcctt
      421 tatattacca attacattgt
//
LOCUS       DBNFCX010000255          387 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.257, whole genome shotgun sequence.
ACCESSION   DBNFCX010000255 DBNFCX010000000
VERSION     DBNFCX010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 387)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 387)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.257"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..355)
                     /locus_tag="AC1PJC_002345"
     CDS             complement(<1..355)
                     /locus_tag="AC1PJC_002345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621297.1"
                     /translation="MSTLKLGAVTLLAGLALFGGATAQAETFTAVSSEATGFKTSDPC
                     RFDGEEVSFDNSGENLRFINWYEPGGRGSEGRVNNEIARKLENGDFTLQHSPADEFKT
                     SDPCLVDEYGFGQIKI"
BASE COUNT          109 a           89 c           55 g          134 t
ORIGIN      
        1 gaatcttaat ttgtccgaat ccgtactcat ctactaagca tggatctgac gtcttaaatt
       61 catctgctgg agagtgttgc aatgtaaaat ctccgttttc taattttctt gcaatctcat
      121 tattcaccct accttctgaa ccacgtccac ctggctcata ccaattaata aatcgaaggt
      181 tttctccact gttatcaaat gaaacttcct caccatcaaa tcgacatgga tctgatgttt
      241 taaatccagt tgcttcagat gatacagctg taaatgtttc tgcttgagcg gtagctcctc
      301 caaataatgc aagtcctgct aacaaggtta ctgcacctaa ttttaatgtt gacataaaaa
      361 tactccttta aatttttctt ttccgta
//
LOCUS       DBNFCX010000256          382 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.258, whole genome shotgun sequence.
ACCESSION   DBNFCX010000256 DBNFCX010000000
VERSION     DBNFCX010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 382)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 382)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.258"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
BASE COUNT          127 a           53 c           80 g          122 t
ORIGIN      
        1 caaagaggta taccacaaat gacggcgtgg ctatacgata tgtacgactt tgataaggaa
       61 tcaataccct atggctattt ttgttttgaa gtattatcac attagtagat ggagtattca
      121 gttataggag aggactgtgg ttatacgaaa tcatctagat tttctaggtg atttcttttt
      181 ggtgtggtag aataaatgtg tagacctttt agaacggaat atcagatgga aactgtctag
      241 atagctctgc tatttcgcaa aagctaaaaa ctcttaaaca cgtatgtaat cctcagacta
      301 cgaaaggtaa gattatttgc tattattgat agttatattg atgacaccga aattcgagaa
      361 aagtttttgg aacaggcaca aa
//
LOCUS       DBNFCX010000257          375 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.259, whole genome shotgun sequence.
ACCESSION   DBNFCX010000257 DBNFCX010000000
VERSION     DBNFCX010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 375)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 375)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.259"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
BASE COUNT          118 a           51 c           66 g          140 t
ORIGIN      
        1 aagacagaaa taagagatat ccaaagaaag agttatttta tgtcagtcaa tcaaattatt
       61 ttagaagttc cattagatat ttagatgtga ctgagtactg aaatctataa acgattggat
      121 gaattatggg aaccagagaa aaaaattatg gatatttcac aggggcatct tatgctcttc
      181 aaaaatcaaa aatatccgtt gtcgacttgc tttgatgaat tccacttcaa ttgtcggctt
      241 cgtttccttg gctacttttg attttcattg atttttattg gttatcaatt tagtggtctt
      301 acggtgaaga taagaatgtt cttttaattg atggtatttt gctcgtgaaa tatcctattc
      361 tattgttatc actca
//
LOCUS       DBNFCX010000258          365 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.260, whole genome shotgun sequence.
ACCESSION   DBNFCX010000258 DBNFCX010000000
VERSION     DBNFCX010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 365)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 365)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.260"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..>365)
                     /locus_tag="AC1PJC_002346"
     CDS             complement(<1..>365)
                     /locus_tag="AC1PJC_002346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012677188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HIP6621298.1"
                     /translation="VVQKTLNFSEELKFYYELYQILLFHFQEMNSKYFFELLEDNLDL
                     VNPAFKTVFKTFLKYKTYITNAMELPYSNAKLEATNKLIKDIKRQAFGFRNFTNFKTK
                     IYIALNIKNERTNFVLSRC"
BASE COUNT          107 a           57 c           76 g          125 t
ORIGIN      
        1 acacctagag aggacgaaat tcgttctctc atttttgatg tttaaagcaa tatatatctt
       61 tgttttaaag ttcgtaaagt ttctaaagcc gaacgcttgc ctcttgatgt ctttgatgag
      121 tttattggtt gcttccagct tagcgttgga atatggaagc tccatggcgt tcgtgatgta
      181 cgttttatac tttagaaaag ttttaaaaac agttttaaag gcaggattga caagatccag
      241 attgtcttct agaagctcga agaaatattt cgagttcatc tcttggaaat ggaagagaag
      301 gatctgatag agttcgtaat agaatttcag ttcctcagag aaattcaatg tcttctggac
      361 aacct
//
LOCUS       DBNFCX010000259          364 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.261, whole genome shotgun sequence.
ACCESSION   DBNFCX010000259 DBNFCX010000000
VERSION     DBNFCX010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.261"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..>364
                     /locus_tag="AC1PJC_002347"
     CDS             <1..>364
                     /locus_tag="AC1PJC_002347"
                     /inference="COORDINATES: protein motif:HMM:NF033863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TipC family immunity protein"
                     /protein_id="HIP6621299.1"
                     /translation="ENVFLEMNYAEVYSGALKGLPDLSTVLGSPQSFREPDRITELPV
                     LVNDPDGGEVSIFVGLEQAFSIEYSKKLGNDTYLYIDYEYRDKKLLGSIEISNSNSSL
                     VWAKYDYWIDKKRGEAVNL"
BASE COUNT          126 a           42 c           88 g          108 t
ORIGIN      
        1 agagaatgta ttcttagaaa tgaactatgc cgaggtatat agtggggcac tgaaaggctt
       61 accagatttg agtactgttt taggaagtcc gcaatcattt agagaaccgg atagaataac
      121 agagttaccc gttcttgtta atgacccaga tggaggggag gtatctatat ttgttggtct
      181 ggaacaagcg ttcagtattg agtattcaaa aaaattaggg aatgatactt atttatatat
      241 agactatgag tatagggata agaaattact aggaagcatt gaaatttcta attcaaatag
      301 ctctttagta tgggctaagt atgactattg gatagataaa aaaaggggtg aagcggtaaa
      361 tctg
//
LOCUS       DBNFCX010000260          352 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.262, whole genome shotgun sequence.
ACCESSION   DBNFCX010000260 DBNFCX010000000
VERSION     DBNFCX010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 352)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 352)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.262"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            complement(<1..>352)
                     /locus_tag="AC1PJC_002348"
     CDS             complement(<1..>352)
                     /locus_tag="AC1PJC_002348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GBS Bsp-like repeat-containing protein"
                     /protein_id="HIP6621300.1"
                     /translation="LPTWSQTDDLRWYEATRQSDGSYKLTVNKKDHKYRTGTYTVHLY
                     YKDSNGGLTGAGGTTTHLSEVKPTGTITIENRNDAQGTFDVRVTNISSPKDMASVILP
                     TWSQTDDLRWYEATR"
BASE COUNT          101 a           78 c           67 g          106 t
ORIGIN      
        1 cgagtggctt cataccaacg taaatcatcc gtctgtgacc aagtgggtaa aataacactt
       61 gccatatctt tcggcgatga aatattagta acacgaacat cgaaggtgcc ttgagcatcg
      121 ttacgatttt caattgtgat ggtacctgtt ggcttcactt ctgataaatg agtcgttgtt
      181 ccacctgcac ctgtcaaacc accatttgaa tccttataat ataaatgaac cgtgtaggta
      241 cctgtacgat acttatggtc cttcttatta acagttaact tataactacc atctgactga
      301 cgagtggctt cataccaacg taaatcatcc gtctgtgacc aagtgggtaa ga
//
LOCUS       DBNFCX010000261          351 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.263, whole genome shotgun sequence.
ACCESSION   DBNFCX010000261 DBNFCX010000000
VERSION     DBNFCX010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.263"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            176..>351
                     /locus_tag="AC1PJC_002349"
     CDS             176..>351
                     /locus_tag="AC1PJC_002349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HIP6621301.1"
                     /translation="MDVLYQSCAGIDVHQANIVVCILHGPLTSTRPKREMATFDTTTK
                     GLRACHDFLSQFHV"
BASE COUNT          102 a           72 c           75 g          102 t
ORIGIN      
        1 ggtgtataat cttagtgagg gctttgtggt tgacgagtta ctgatgttag tcatcgcggg
       61 aaaaactaac ccactctact gacgagcacc ccaaaatatg cgataggcat gagtataaaa
      121 atacgactaa aattcggtag ataagctctc taatttttag aaggagggaa ttatcatgga
      181 tgttctctat caatcttgtg caggtattga tgtccatcaa gccaatattg tcgtctgtat
      241 cctacatgga ccactcacct caactcgtcc aaagcgtgag atggctacat ttgatacaac
      301 gactaaaggc ctacgtgctt gccacgattt tctcagtcaa tttcatgtgg a
//
LOCUS       DBNFCX010000262          341 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.264, whole genome shotgun sequence.
ACCESSION   DBNFCX010000262 DBNFCX010000000
VERSION     DBNFCX010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 341)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 341)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.264"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
BASE COUNT          133 a           22 c           59 g          127 t
ORIGIN      
        1 tattttctta aaatttgaat tatcaatatt gaatatgtcg agaagatggc aggtatcaaa
       61 gtcatggttg agttattatt tgatgtgatt ataagctgga tagtgtagaa aatagaaaag
      121 tttataataa cagtttgtat agtattggat aagctaattt caatattttt ataaataaaa
      181 tagtatccaa ctatacaagt gatattgaaa aaactttgga taaagaaaat aatatcaaag
      241 ttcgatccgt aatatttgta cattaatatt tctaagatgg gaagtgttag tgcagaagta
      301 agagatatta gtagagattt aaatattatt attttatttt g
//
LOCUS       DBNFCX010000263          339 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.denovo.265, whole genome shotgun sequence.
ACCESSION   DBNFCX010000263 DBNFCX010000000
VERSION     DBNFCX010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 339)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 339)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.denovo.265"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            <1..>339
                     /locus_tag="AC1PJC_002350"
     CDS             <1..>339
                     /locus_tag="AC1PJC_002350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018378354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HIP6621302.1"
                     /translation="NYVNDVNQQHTQVLQTYDDQLQKRETYVYGNGRATYTNESTGDS
                     YHYLTSQSGSVTGLTQNGNSVASSSYNLYGATKQTTDTTGNPFAYNGEARDVTGLDYL
                     RARYYDSQAGT"
BASE COUNT          101 a          100 c           75 g           63 t
ORIGIN      
        1 aaactacgtc aacgacgtca atcagcagca cacccaagtc ctgcaaacct atgacgacca
       61 gctccagaaa cgggagacct atgtctatgg caatggcaga gctacctata ctaacgagag
      121 cactggcgac agctatcact acctgaccag ccagtctggc tctgtgacag gtctgactca
      181 gaatggcaat tctgttgcat ctagctctta caatctctac ggagcaacca agcagaccac
      241 agataccaca ggcaatccat ttgcctacaa tggcgaagca cgggatgtga caggtctgga
      301 ctacctccgt gcacgatact acgatagcca agcaggcac
//
LOCUS       DBNFCX010000264         4181 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.guided.135, whole genome shotgun sequence.
ACCESSION   DBNFCX010000264 DBNFCX010000000
VERSION     DBNFCX010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 4181)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4181)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4181
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.guided.135"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            29..1756
                     /locus_tag="AC1PJC_002351"
     CDS             29..1756
                     /locus_tag="AC1PJC_002351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6621303.1"
                     /translation="MFRLIFDYIKRHKWLYLLVAVTLIIYDATLLLPTQIIQRMVDIL
                     TKNELTQAILVQEMTLLLLVTVLNYATAFIWHLKLFQASVNFKFDMQQRAFKKLVTMR
                     TPFYEKFRSGDVMTRFSTDVDGLMEMVGYGLMIVVYAGGMLAFIIPTMFFIDWKISLV
                     ALLPMLFMTLCIFFIGRKQDKAIDANREAVAQLNNEVLEVIEGIRVTRAYSKKANQKA
                     QFQARTKQLAQGGDRITSLQSLYNPLATVCLGLSTIFVLLMGAQAVKAGQLTLGQVIA
                     LQLYVGSLLEPFWTLADFILVYQTGKTSFEKLQELIETGDDLEADGSKEIAELSSISF
                     KNYSFSYPQAERASLQDINWTLKAGQTVGIVGKTGSGKTTLVRQFLRQYPIGQGNFFI
                     NHQSVLDFKRSSIEEKIGYVPQEHILFSRSVGENIALGKVVSSSEEIEQAIATAAFSQ
                     DLKRMTDGLDTMIGERGVSISGGQKQRISIARAFLREPDLLILDDSLSAVDARTERQI
                     IQNIQKERAGKTNVIVTHRLSAVNHADWVLVLDEGRIVEEGRPADLLAQRGWYYEQYQ
                     RQQSQEGGE"
     gene            1756..3495
                     /locus_tag="AC1PJC_002352"
     CDS             1756..3495
                     /locus_tag="AC1PJC_002352"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HIP6621304.1"
                     /translation="MTILGFLLKQIGRVKWLFIVAVGFYLLASTMVRLAPLLIQQAID
                     GPITDLSKGLPFDEAVFLNQSAQYMGMIILGAIGFYLSMRLLMHCANRIAENLRNQAY
                     DVMQRLPISYFDDKPAGKIATRIVNDTETLRTQFYGTLVNAFNNIVRLLFTYGVLFYM
                     NRSLGWLMLLLIPLYIGIQFAYKKMTDKPMKDFYDARSDVNTQVNETMNGASLIQLFG
                     QEERIMKEFEVTADKMRRADNKIIWAQSLATWNLSGFLQNLVIAAILTVVGYQFLAGQ
                     DGVTAGKLFVYVNYIEGVFIALGALVQQFPNMLRSFETGKRLMALLEEEVEDDCDRIL
                     EVEQGQVVFEHVNFSYEENRPVLKDITIRAEKGETVALVGHTGSGKSSIMNLLYRFYD
                     PQEGRVLIDGKNIRDYSRESLRSHMGIVLQDPYLFTGTIASNVSMNEEEADRTRIMQA
                     LEKVGAGPMLSRLEKGIDEPVVEKGAAFSSGERQLIAFARTLYSDPKILILDEATSHI
                     DTETEEIIQHAMEVVKEGRTTFIIAHRLSTIQNADQILVLDQGRIIEHGKHEELVAHG
                     GVYAQMHEIQAKV"
     gene            3549..>4181
                     /locus_tag="AC1PJC_002353"
     CDS             3549..>4181
                     /locus_tag="AC1PJC_002353"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HIP6621305.1"
                     /translation="MKALIFDVDDTLYDQIQPFERALERHIEVAREQIEPLYLSFRRY
                     ADEVFEATAIGKMSLKDSYIYRMKHALADFGYQVSDAAALAIQIDYDYFQGQIELSPV
                     FPEIFSWCQAQGIAMGIITNGPYRHQLRKIRTMGLVNWFELEHVLISGQVGITKPNPA
                     IFQLMEERLGLSGEDICYLGDSFENDVVGAKAANWKAIWFNHRKRVEPTAP"
BASE COUNT         1189 a          739 c         1003 g         1250 t
ORIGIN      
        1 ataggttata gatttgtaaa ggagatatat gtttcgatta atttttgatt atatcaagcg
       61 tcataagtgg ctctatctat tggttgctgt gaccttgatt atttatgacg ccacactttt
      121 gctaccaacg caaatcattc agcggatggt cgatatactg accaagaatg aattaacaca
      181 ggccatattg gttcaggaga tgaccttatt gttattggta acagtgctga actatgcaac
      241 agccttcatt tggcatctga aattatttca ggcctctgtc aatttcaagt ttgatatgca
      301 gcaacgtgcc tttaaaaaat tagtgaccat gcggactcca ttttatgaaa aattccgctc
      361 aggagatgtc atgactcgtt tttcaacgga tgtggatggc ctgatggaga tggtgggtta
      421 cggtcttatg attgtcgtct atgcaggcgg tatgttggct tttatcattc ccacgatgtt
      481 ctttattgat tggaaaattt cgctagtagc tttattaccg atgttgttca tgacactatg
      541 tatatttttt atcgggagaa aacaagataa ggcgattgat gccaatagag aagctgtagc
      601 ccagctcaat aatgaagttt tggaggtcat cgaaggtatt cgagtgactc gggcttatag
      661 taaaaaagca aatcaaaagg ctcaatttca agctcgtacc aaacaattgg ctcaaggtgg
      721 ggaccgaatc acttccttgc aatcattgta taatccatta gccacagtct gtttgggatt
      781 gtctactatt ttcgtgcttc tcatgggggc acaagccgtg aaagcagggc aactgacctt
      841 gggacaagta attgcccttc aattgtatgt cggttcgctt ttagagccgt tttggacact
      901 agcagatttc atccttgttt atcagactgg taagacatct ttcgaaaaac tgcaagagct
      961 gattgagacg ggtgatgatt tggaggctga tggttctaag gaaattgcag agctgtctag
     1021 tatttccttc aaaaattata gctttagtta tccacaggcg gaaagagcca gcctacagga
     1081 catcaattgg acactgaaag cagggcaaac tgtaggtatc gttgggaaaa ctggttcggg
     1141 aaaaacgacc ttggttcgcc aattcttacg ccagtatccg attggtcagg gaaatttttt
     1201 catcaatcat caatctgttt tagactttaa acgttctagt atagaggaaa aaattggcta
     1261 tgttccacaa gaacacattt tgttttcaag gtctgttgga gaaaatattg cccttgggaa
     1321 agtagttagt agctctgagg agattgaaca agccattgcc acagcagctt ttagtcaaga
     1381 tttaaaacgg atgactgatg gtcttgatac catgattggt gagcgtggtg tatctatttc
     1441 tggcggtcag aaacaacgga tttccattgc ccgtgctttc ctgcgagagc cagatttgct
     1501 gattctagat gattctttgt cggcagtgga tgctcggaca gaacgccaga ttatccaaaa
     1561 tattcaaaaa gaacgtgcag gcaaaaccaa tgtcatcgtg acccatcgtc tatctgctgt
     1621 caaccatgca gactgggtac tagtcttgga tgaggggcgt atcgttgagg aagggcgtcc
     1681 agctgatttg cttgcccaaa gaggttggta ctatgaacaa taccaacgac aacaaagcca
     1741 ggaaggagga gagtaatgac tattttaggt tttttattaa aacaaatcgg tcgtgttaag
     1801 tggctattta tagtagctgt cggcttctat ctattggctt cgaccatggt tcgattggct
     1861 cctctgctga ttcagcaggc gattgatggg ccgattacgg atttgagcaa gggtttgcct
     1921 tttgatgaag ctgttttctt aaaccagtca gctcaataca tgggaatgat tattctggga
     1981 gctattggct tctacctatc tatgcgtcta ctcatgcatt gcgccaatcg tattgctgaa
     2041 aatctgcgta atcaagccta cgatgttatg caacggttgc ctatttctta ttttgatgat
     2101 aagcccgctg gaaaaattgc aactagaatt gtcaatgata cagaaaccct gcggacacaa
     2161 ttttatggga ccttagttaa tgcctttaac aatattgttc gtttgctctt tacatacggt
     2221 gtcctatttt acatgaatag gagtcttggt tggctgatgt tactcttaat accactctat
     2281 atcggcattc aatttgctta caagaaaatg acagacaagc caatgaagga tttttatgat
     2341 gcaaggagtg acgtcaatac gcaggtgaat gagaccatga atggtgcaag tttgattcaa
     2401 ctttttggac aagaagagcg catcatgaaa gaatttgaag tgactgctga caagatgcgt
     2461 cgggcagata ataagattat ctgggcccag tctcttgcca cgtggaatct gagtggtttt
     2521 cttcaaaatt tggtcattgc tgcgatttta acggtagtcg gctatcaatt tcttgcggga
     2581 caggatggag ttacagctgg gaaactcttt gtttatgtca actatatcga aggagtcttc
     2641 attgctttgg gagcgctggt tcaacagttc ccaaatatgc ttcgctcttt tgaaacaggt
     2701 aagcgtctaa tggcccttct agaagaagag gtggaggacg actgtgatcg tattttggaa
     2761 gttgaacaag ggcaagtcgt gtttgaacac gtgaacttta gctatgaaga aaacagacca
     2821 gttttgaaag atattaccat tcgggcagaa aaaggagaaa cagttgcttt ggttgggcat
     2881 actgggtctg gtaagtcttc tattatgaac ctcctctatc gtttctatga tccacaggag
     2941 ggacgtgtac tgattgatgg gaaaaacatc cgtgattatt cccgtgaaag cctgcgcagt
     3001 cacatgggga ttgttttgca agatccctat ctctttacag ggacgattgc cagcaatgtt
     3061 tccatgaatg aagaggaagc agatagaaca agaatcatgc aggcgctaga aaaagttggt
     3121 gcagggccta tgctatctcg cttagagaaa gggattgatg aaccggttgt tgagaagggg
     3181 gcggcctttt caagtgggga acgtcagttg attgcctttg cgcggacact ctactctgat
     3241 cctaaaattc tgatattgga tgaagcaact tctcatattg atacggagac ggaagaaatt
     3301 atccaacatg ccatggaagt ggtaaaagaa ggtcggacaa cctttattat tgctcaccga
     3361 ctttctacca ttcaaaatgc agaccagatt cttgtcttag atcaaggtcg aattattgaa
     3421 catgggaagc atgaagaatt ggttgcacat ggtggagtat atgctcaaat gcatgagatt
     3481 caagcaaagg tgtaataagc agttaaaaat tccaagcttt ggctggaatt ttttgctata
     3541 attgactcat gaaagcctta atttttgatg tagatgatac gctttatgat cagattcaac
     3601 cgtttgaacg tgctttggaa agacatattg aagtagcaag ggagcaaatt gaaccactct
     3661 acctttcctt tcgcagatat gcggatgaag tatttgaagc gacagcaatt ggaaagatga
     3721 gtctgaaaga cagttatatt tatcggatga aacatgcttt ggcagatttt gggtatcagg
     3781 tgtctgatgc agcagcctta gctattcaaa tagattatga ttattttcaa gggcagatag
     3841 agctcagtcc agtgtttcca gaaatatttt catggtgtca ggcgcaagga attgcaatgg
     3901 ggattattac gaatggacct tatagacatc agttgagaaa gatacgcacg atggggttag
     3961 ttaattggtt tgagctagaa catgtcctaa tttctggaca agttggtatc acaaagccaa
     4021 atcctgctat ttttcaacta atggaagaac gtttggggct gtcaggcgaa gatatttgtt
     4081 atctagggga ttcgtttgaa aatgatgtgg taggagcgaa agctgcgaat tggaaggcaa
     4141 tttggtttaa tcatagaaag agagtagagc caacagctcc g
//
LOCUS       DBNFCX010000265         2085 bp    DNA     linear   BCT 09-APR-2026
DEFINITION  TPA_asm: Streptococcus suis strain NDA_43
            SAMN40446049-rid29426123.guided.181, whole genome shotgun sequence.
ACCESSION   DBNFCX010000265 DBNFCX010000000
VERSION     DBNFCX010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN40446049
            Sequence Read Archive: SRR28339479
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2085)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2085)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2026) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using the SAUTE guided assembler with
            antimicrobial resistance genes and Stx operons as baits to increase
            sensitivity and specificity for those genes. Note, contigs derived
            from the SAUTE guided assembly may overlap de-novo contigs from
            SKESA, and/or other SAUTE contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names, which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-APR-2026
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT003171419.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT003171419.1
            Genome Coverage       :: 44x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 04/09/2026 17:00:03
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2025-05-06.build7983
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,301
            Genes (coding)                    :: 2,250
            CDSs (with protein)               :: 2,250
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 15 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 11 of 51
            Pseudo Genes (multiple problems)  :: 7 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2085
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN40446049-rid29426123.guided.181"
                     /strain="NDA_43"
                     /host="swine"
                     /db_xref="taxon:1307"
                     /geo_loc_name="USA"
                     /collection_date="2019"
     gene            188..1573
                     /gene="vga(F)"
                     /locus_tag="AC1PJC_002354"
                     /gene_synonym="srpA"
     CDS             188..1573
                     /gene="vga(F)"
                     /locus_tag="AC1PJC_002354"
                     /gene_synonym="srpA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F type ribosomal protection protein Vga(F)"
                     /protein_id="HIP6621306.1"
                     /translation="MEMIKCIQLEKEFAGRSLFTIQQLSLQAGQKVGLVGNNGVGKST
                     FLKILLGLDRDFVGQIEVKADWAYVPQLQERSSLSGGEQVWKSIQEAFAQRPQLLILD
                     EPTANLDQEHQEKLIKQIKRYRGSLLVVSHDRHFLNQIASHIWHLEEGSIQVYTGNYE
                     AFVESRRARREGQQEAYEAYQKKVAQLKKAQKERQVKAQKMGKRKKGVSSSEWKVSAM
                     MGSYDSQSKSMAKSAKQLEKRIERLEKVSQPRREAHIKMESKGALDTDLHRLFLLQAG
                     QVFVDEVYLFDFPQIGMTFGEKLALVGANGSGKTSFVRKLLRKELAGYYNPKLKIAYF
                     AQDLINLDEEKTAFENVSCTSLQDKMTILNLLGMLGLSYDKAQQKVANLSGGERVRLS
                     LAKVLLADANLLILDEPTNFLDMAAIEALETFLKEYEGSVLLVSHDQQFVETSVHSQW
                     EIVQACLVKKS"
     gene            1665..>2085
                     /locus_tag="AC1PJC_002355"
     CDS             1665..>2085
                     /locus_tag="AC1PJC_002355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HIP6621307.1"
                     /translation="MKKRKNKPLEHDGNFISLRLNILFSIVIFLFLVLILRLADMQII
                     NHDFYSNKLSTASQKIISNGSIRGQIYDAQGKPLVENEIQQVVSFTRSNKMSAQEMKE
                     VANKLLQWVNVSDVTITQRDKADYYLADEEVYRQVVEA"
BASE COUNT          647 a          320 c          500 g          618 t
ORIGIN      
        1 acttattagt cattcttaaa aattgtagtg aggttatatt aaccgagaat acaagggata
       61 agactgctca taagggctta ctattcatgt gactttttcc atagggaaag gtcatgtttt
      121 gcatggcttt tttcttgtgt cattttttga agaatagaag ccctttttgt gaagaaaaga
      181 ggtctatatg gaaatgataa aatgtattca attagagaag gaatttgcgg gacgtagttt
      241 gtttacaatc cagcagttga gccttcaagc tggtcaaaag gttggtttgg ttggaaataa
      301 tggtgttggc aagtctactt ttttgaaaat cttactagga ctggataggg attttgtcgg
      361 tcaaattgag gtaaaagcag actgggccta tgtaccccag ttacaggaaa ggagctcgct
      421 ttcaggtggg gaacaggttt ggaagtctat tcaagaggct tttgcccaaa gaccgcagtt
      481 gttaatcctg gatgagccga cagctaatct agaccaagaa caccaggaaa agctaatcaa
      541 acaaatcaaa cgctatcgag gtagtctact agttgttagt catgatcggc attttctcaa
      601 tcaaatagcc agtcacattt ggcatttaga agaaggaagt attcaggtct atacagggaa
      661 ttatgaggcg tttgtagaaa gtcgccgggc taggcgagaa gggcagcagg aggcctatga
      721 agcctatcag aaaaaagtcg ctcaactaaa aaaagcccaa aaagagcgtc aggtcaaggc
      781 tcagaagatg gggaagagaa agaaaggtgt ttcatcgtct gagtggaaag tcagtgctat
      841 gatgggttcc tatgatagtc aatccaagtc aatggctaag tctgctaaac agttagagaa
      901 aaggattgag aggttggaaa aggttagtca gcccagaagg gaggctcata ttaaaatgga
      961 atcaaaaggg gccttagata ctgatttaca cagactattt cttttgcaag caggtcaagt
     1021 ttttgtggat gaagtgtatc tatttgattt ccctcagata gggatgacgt ttggagagaa
     1081 gttagcctta gtgggggcga atggttctgg aaagaccagt tttgtccgaa aattattaag
     1141 gaaagaattg gcaggctatt ataatcctaa gttaaaaatt gcttattttg cacaggattt
     1201 gataaacctt gatgaagaaa agactgcttt tgaaaatgtt agttgtacct ctcttcaaga
     1261 taagatgacg attctcaatt tattaggtat gttaggactt tcttacgata aggctcagca
     1321 gaaggtagca aatctgtctg gtggtgagcg tgttcgtctc tccttagcta aggtattgtt
     1381 ggcggatgca aatcttttga tattagatga accgacaaat tttctagata tggcagctat
     1441 tgaagctttg gaaacattct tgaaggaata tgaaggaagt gtcctcttgg tttcccatga
     1501 tcaacagttt gtggaaacat ctgttcacag tcaatgggag atagtgcaag cttgtctcgt
     1561 gaagaaatca taagaaaata ttttctgaaa aggaggctct gtctaaaaaa tattttttgc
     1621 ctgtggtata ataagaagga tatttctaga atgaggtctt tgaagtgaaa aaaagaaaga
     1681 acaagccttt ggaacacgat gggaatttta tttcccttcg tttaaatatt ttattttcta
     1741 tcgtgatttt ccttttccta gttttgatat tgcgtctggc agatatgcag attatcaatc
     1801 atgattttta tagtaataag ctgtctactg ccagtcagaa aatcattagc aatggctcta
     1861 tccgtgggca gatttacgat gcgcaaggaa aacctttggt tgaaaacgag attcagcagg
     1921 ttgtctcctt cacacgttcc aacaagatgt ctgcacagga aatgaaagaa gtagctaaca
     1981 aactcttgca gtgggtcaat gtgtcggacg taacaattac tcaacgtgac aaggctgatt
     2041 attatttggc agatgaagaa gtttatcgtc aggtagtcga ggcct
//
