Source Name Characteristics[sample_name] Characteristics[organism] Characteristics[taxonomy_id] Characteristics[strain] Characteristics[age] Characteristics[collection_date] Characteristics[geo_loc_name] Characteristics[sex] Characteristics[tissue] Characteristics[genotype] Characteristics[phenotype] Characteristics[biological_replicate] Comment[BioSample] Comment[sample_title] Comment[description] Protocol REF Sample Name Protocol REF Parameter Value[Post extraction] Parameter Value[Derivatization] Extract Name Protocol REF Parameter Value[Chromatography instrument] Parameter Value[Autosampler model] Parameter Value[Column model] Parameter Value[Column type] Parameter Value[Guard column] Labeled Extract Name Label Protocol REF Parameter Value[Scan polarity] Parameter Value[Scan m/z range] Parameter Value[Instrument] Parameter Value[Ion source] Parameter Value[Mass analyzer] Assay Name Comment[technical_replicate] Raw Data File Protocol REF Processed Data File Protocol REF Metabolite Assignment File Comment[maf_value_unit] Factor Value[phenotype] Factor Value[tissue] 20211207_RUPP_LI_001 20211207_RUPP_LI_001 Mus musculus 10090 ICR 10w 2021-05-19 Japan female liver wild type Low birthweight 1 SAMD00657576 Liver of pregnancy mouse derived from low birthweight Pregnancy mouse derived from low birthweight Sample collection 20211207_RUPP_LI_001 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211207_RUPP_LI_001 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211207_RUPP_LI_001 raw/20211207_RUPP_LI_001.qgd Data processing Metabolite identification Low birthweight liver 20211207_RUPP_LI_002 20211207_RUPP_LI_002 Mus musculus 10090 ICR 10w 2021-05-17 Japan female liver wild type Low birthweight 2 SAMD00657577 Liver of pregnancy mouse derived from low birthweight Pregnancy mouse derived from low birthweight Sample collection 20211207_RUPP_LI_002 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211207_RUPP_LI_002 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211207_RUPP_LI_002 raw/20211207_RUPP_LI_002.qgd Data processing Metabolite identification Low birthweight liver 20211207_RUPP_LI_003 20211207_RUPP_LI_003 Mus musculus 10090 ICR 11w 2021-06-28 Japan female liver wild type Low birthweight 3 SAMD00657578 Liver of pregnancy mouse derived from low birthweight Pregnancy mouse derived from low birthweight Sample collection 20211207_RUPP_LI_003 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211207_RUPP_LI_003 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211207_RUPP_LI_003 raw/20211207_RUPP_LI_003.qgd Data processing Metabolite identification Low birthweight liver 20211207_RUPP_LI_004 20211207_RUPP_LI_004 Mus musculus 10090 ICR 11w 2021-07-02 Japan female liver wild type Low birthweight 4 SAMD00657579 Liver of pregnancy mouse derived from low birthweight Pregnancy mouse derived from low birthweight Sample collection 20211207_RUPP_LI_004 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211207_RUPP_LI_004 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211207_RUPP_LI_004 raw/20211207_RUPP_LI_004.qgd Data processing Metabolite identification Low birthweight liver 20211207_RUPP_LI_005 20211207_RUPP_LI_005 Mus musculus 10090 ICR 11w 2021-06-30 Japan female liver wild type Low birthweight 5 SAMD00657580 Liver of pregnancy mouse derived from low birthweight Pregnancy mouse derived from low birthweight Sample collection 20211207_RUPP_LI_005 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211207_RUPP_LI_005 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211207_RUPP_LI_005 raw/20211207_RUPP_LI_005.qgd Data processing Metabolite identification Low birthweight liver 20211207_RUPP_LI_006 20211207_RUPP_LI_006 Mus musculus 10090 ICR 11w 2021-06-28 Japan female liver wild type Low birthweight 6 SAMD00657581 Liver of pregnancy mouse derived from low birthweight Pregnancy mouse derived from low birthweight Sample collection 20211207_RUPP_LI_006 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211207_RUPP_LI_006 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211207_RUPP_LI_006 raw/20211207_RUPP_LI_006.qgd Data processing Metabolite identification Low birthweight liver 20211209_RUPP_LI_001 20211209_RUPP_LI_001 Mus musculus 10090 ICR 11w 2021-05-20 Japan female liver wild type Normal birthweight 1 SAMD00657582 Liver of pregnancy mouse derived from normal birthweight Pregnancy mouse derived from normal birthweight Sample collection 20211209_RUPP_LI_001 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211209_RUPP_LI_001 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211209_RUPP_LI_001 raw/20211209_RUPP_LI_001.qgd Data processing Metabolite identification Normal birthweight liver 20211209_RUPP_LI_002 20211209_RUPP_LI_002 Mus musculus 10090 ICR 11w 2021-05-18 Japan female liver wild type Normal birthweight 2 SAMD00657583 Liver of pregnancy mouse derived from normal birthweight Pregnancy mouse derived from normal birthweight Sample collection 20211209_RUPP_LI_002 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211209_RUPP_LI_002 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211209_RUPP_LI_002 raw/20211209_RUPP_LI_002.qgd Data processing Metabolite identification Normal birthweight liver 20211209_RUPP_LI_003 20211209_RUPP_LI_003 Mus musculus 10090 ICR 15w 2021-07-25 Japan female liver wild type Normal birthweight 3 SAMD00657584 Liver of pregnancy mouse derived from normal birthweight Pregnancy mouse derived from normal birthweight Sample collection 20211209_RUPP_LI_003 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211209_RUPP_LI_003 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211209_RUPP_LI_003 raw/20211209_RUPP_LI_003.qgd Data processing Metabolite identification Normal birthweight liver 20211209_RUPP_LI_004 20211209_RUPP_LI_004 Mus musculus 10090 ICR 11w 2021-07-02 Japan female liver wild type Normal birthweight 4 SAMD00657585 Liver of pregnancy mouse derived from normal birthweight Pregnancy mouse derived from normal birthweight Sample collection 20211209_RUPP_LI_004 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211209_RUPP_LI_004 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211209_RUPP_LI_004 raw/20211209_RUPP_LI_004.qgd Data processing Metabolite identification Normal birthweight liver 20211209_RUPP_LI_005 20211209_RUPP_LI_005 Mus musculus 10090 ICR 11w 2021-07-01 Japan female liver wild type Normal birthweight 5 SAMD00657586 Liver of pregnancy mouse derived from normal birthweight Pregnancy mouse derived from normal birthweight Sample collection 20211209_RUPP_LI_005 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211209_RUPP_LI_005 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211209_RUPP_LI_005 raw/20211209_RUPP_LI_005.qgd Data processing Metabolite identification Normal birthweight liver 20211209_RUPP_LI_006 20211209_RUPP_LI_006 Mus musculus 10090 ICR 11w 2021-06-30 Japan female liver wild type Normal birthweight 6 SAMD00657587 Liver of pregnancy mouse derived from normal birthweight Pregnancy mouse derived from normal birthweight Sample collection 20211209_RUPP_LI_006 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211209_RUPP_LI_006 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211209_RUPP_LI_006 raw/20211209_RUPP_LI_006.qgd Data processing Metabolite identification Normal birthweight liver 20211209_RUPP_PA_001 20211209_RUPP_PA_001 Mus musculus 10090 ICR 10w 2020-12-17 Japan female placenta wild type Normal birthweight 1 SAMD00657588 13.5dpc placenta of pregnancy mouse derived from normal birthweight Pregnancy mouse derived from normal birthweight Sample collection 20211209_RUPP_PA_001 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211209_RUPP_PA_001 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211209_RUPP_PA_001 raw/20211209_RUPP_PA_001.qgd Data processing Metabolite identification Normal birthweight placenta 20211209_RUPP_PA_002 20211209_RUPP_PA_002 Mus musculus 10090 ICR 10w 2020-12-15 Japan female placenta wild type Normal birthweight 2 SAMD00657589 13.5dpc placenta of pregnancy mouse derived from normal birthweight Pregnancy mouse derived from normal birthweight Sample collection 20211209_RUPP_PA_002 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211209_RUPP_PA_002 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211209_RUPP_PA_002 raw/20211209_RUPP_PA_002.qgd Data processing Metabolite identification Normal birthweight placenta 20211209_RUPP_PA_003 20211209_RUPP_PA_003 Mus musculus 10090 ICR 11w 2021-06-27 Japan female placenta wild type Normal birthweight 3 SAMD00657590 13.5dpc placenta of pregnancy mouse derived from normal birthweight Pregnancy mouse derived from normal birthweight Sample collection 20211209_RUPP_PA_003 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211209_RUPP_PA_003 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211209_RUPP_PA_003 raw/20211209_RUPP_PA_003.qgd Data processing Metabolite identification Normal birthweight placenta 20211209_RUPP_PA_004 20211209_RUPP_PA_004 Mus musculus 10090 ICR 10w 2021-06-20 Japan female placenta wild type Normal birthweight 4 SAMD00657591 13.5dpc placenta of pregnancy mouse derived from normal birthweight Pregnancy mouse derived from normal birthweight Sample collection 20211209_RUPP_PA_004 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211209_RUPP_PA_004 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211209_RUPP_PA_004 raw/20211209_RUPP_PA_004.qgd Data processing Metabolite identification Normal birthweight placenta 20211209_RUPP_PA_005 20211209_RUPP_PA_005 Mus musculus 10090 ICR 10w 2021-05-21 Japan female placenta wild type Normal birthweight 5 SAMD00657592 13.5dpc placenta of pregnancy mouse derived from normal birthweight Pregnancy mouse derived from normal birthweight Sample collection 20211209_RUPP_PA_005 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211209_RUPP_PA_005 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211209_RUPP_PA_005 raw/20211209_RUPP_PA_005.qgd Data processing Metabolite identification Normal birthweight placenta 20211209_RUPP_PA_006 20211209_RUPP_PA_006 Mus musculus 10090 ICR 10w 2021-05-19 Japan female placenta wild type Normal birthweight 6 SAMD00657593 13.5dpc placenta of pregnancy mouse derived from normal birthweight Pregnancy mouse derived from normal birthweight Sample collection 20211209_RUPP_PA_006 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211209_RUPP_PA_006 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211209_RUPP_PA_006 raw/20211209_RUPP_PA_006.qgd Data processing Metabolite identification Normal birthweight placenta 20211209_RUPP_PA_007 20211209_RUPP_PA_007 Mus musculus 10090 ICR 9w 2020-10-04 Japan female placenta wild type Low birthweight 1 SAMD00657594 13.5dpc placenta of pregnancy mouse derived from low birthweight Pregnancy mouse derived from low birthweight Sample collection 20211209_RUPP_PA_007 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211209_RUPP_PA_007 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211209_RUPP_PA_007 raw/20211209_RUPP_PA_007.qgd Data processing Metabolite identification Low birthweight placenta 20211209_RUPP_PA_008 20211209_RUPP_PA_008 Mus musculus 10090 ICR 9w 2021-06-17 Japan female placenta wild type Low birthweight 2 SAMD00657595 13.5dpc placenta of pregnancy mouse derived from low birthweight Pregnancy mouse derived from low birthweight Sample collection 20211209_RUPP_PA_008 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211209_RUPP_PA_008 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211209_RUPP_PA_008 raw/20211209_RUPP_PA_008.qgd Data processing Metabolite identification Low birthweight placenta 20211209_RUPP_PA_009 20211209_RUPP_PA_009 Mus musculus 10090 ICR 9w 2021-06-17 Japan female placenta wild type Low birthweight 3 SAMD00657596 13.5dpc placenta of pregnancy mouse derived from low birthweight Pregnancy mouse derived from low birthweight Sample collection 20211209_RUPP_PA_009 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211209_RUPP_PA_009 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211209_RUPP_PA_009 raw/20211209_RUPP_PA_009.qgd Data processing Metabolite identification Low birthweight placenta 20211209_RUPP_PA_010 20211209_RUPP_PA_010 Mus musculus 10090 ICR 9w 2021-06-16 Japan female placenta wild type Low birthweight 4 SAMD00657597 13.5dpc placenta of pregnancy mouse derived from low birthweight Pregnancy mouse derived from low birthweight Sample collection 20211209_RUPP_PA_010 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211209_RUPP_PA_010 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211209_RUPP_PA_010 raw/20211209_RUPP_PA_010.qgd Data processing Metabolite identification Low birthweight placenta 20211209_RUPP_PA_011 20211209_RUPP_PA_011 Mus musculus 10090 ICR 10w 2021-05-21 Japan female placenta wild type Low birthweight 5 SAMD00657598 13.5dpc placenta of pregnancy mouse derived from low birthweight Pregnancy mouse derived from low birthweight Sample collection 20211209_RUPP_PA_011 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211209_RUPP_PA_011 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211209_RUPP_PA_011 raw/20211209_RUPP_PA_011.qgd Data processing Metabolite identification Low birthweight placenta 20211209_RUPP_PA_012 20211209_RUPP_PA_012 Mus musculus 10090 ICR 9w 2020-10-04 Japan female placenta wild type Low birthweight 6 SAMD00657599 13.5dpc placenta of pregnancy mouse derived from low birthweight Pregnancy mouse derived from low birthweight Sample collection 20211209_RUPP_PA_012 Extraction homogenized with 250 microL of a solution containing 55% methanol and 22% chloroform Oximation, silylation 20211209_RUPP_PA_012 Chromatography GC-MS/MS TQ8040 (Shimadzu) AOC-20i (Shimadzu) BPX5 (Catalog No.: 054101, Shimadzu GLC) Low polarity Mass spectrometry positive 45-600 GC-MS/MS TQ8040 (Shimadzu) electron ionization triple quadruple 20211209_RUPP_PA_012 raw/20211209_RUPP_PA_012.qgd Data processing Metabolite identification Low birthweight placenta