pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/snps/CHB+JPT.SRP000031.2010_07.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/snps/low_coverage.2010_06.ychr.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/snps/CHB+JPT.SRP000031.2010_07.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/snps/low_coverage.2010_06.ychr.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/snps/CEU.SRP000031.2010_07.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/snps/CEU.SRP000031.2010_07.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/snps/low_coverage.2010_07.mt.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/snps/CHB+JPT.SRP000031.2010_07.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/snps/low_coverage.2010_06.ychr.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/snps/YRI.SRP000031.2010_07.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/snps/YRI.SRP000031.2010_07.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/snps/low_coverage.2010_07.mt.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/snps/CEU.SRP000031.2010_07.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/snps/CEU.SRP000031.2010_07.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/snps/low_coverage.2010_07.mt.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/snps/CHB+JPT.SRP000031.2010_07.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/snps/low_coverage.2010_06.ychr.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/snps/YRI.SRP000031.2010_07.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/snps/YRI.SRP000031.2010_07.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/snps/low_coverage.2010_07.mt.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/indels/YRI.low_coverage.2010_06.indel.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/indels/YRI.low_coverage.2010_06.indel.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/indels/CEU.low_coverage.2010_06.indel.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/indels/CEU.low_coverage.2010_06.indel.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/indels/JPTCHB.low_coverage.2010_06.indel.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/indels/JPTCHB.low_coverage.2010_06.indel.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/indels/YRI.low_coverage.2010_06.indel.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/indels/YRI.low_coverage.2010_06.indel.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/indels/CEU.low_coverage.2010_06.indel.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/indels/CEU.low_coverage.2010_06.indel.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/indels/JPTCHB.low_coverage.2010_06.indel.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/indels/JPTCHB.low_coverage.2010_06.indel.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/JPTCHB.low_coverage.2010_06.deletions.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/CHBJPT.low_coverage.2010_06.TandemDuplications.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/CEU.low_coverage.2010_06.deletions.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/CHBJPT.low_coverage.2010_06.MobileElementInsertions.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/YRI.low_coverage.2010_06.deletions_discovered_in_trios.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/YRI.low_coverage.2010_06.TandemDuplications.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/YRI.low_coverage.2010_06.deletions.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/low_coverage.2010_06.deletions.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/CEU.low_coverage.2010_06.MobileElementInsertions.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/JPTCHB.low_coverage.2010_06.deletions_discovered_in_trios.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/YRI.low_coverage.2010_06.MobileElementInsertions.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/CEU.low_coverage.2010_06.TandemDuplications.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/CEU.low_coverage.2010_06.deletions_discovered_in_trios.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/JPTCHB.low_coverage.2010_06.deletions.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/CHBJPT.low_coverage.2010_06.TandemDuplications.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/CEU.low_coverage.2010_06.deletions.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/CHBJPT.low_coverage.2010_06.MobileElementInsertions.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/YRI.low_coverage.2010_06.deletions_discovered_in_trios.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/YRI.low_coverage.2010_06.TandemDuplications.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/YRI.low_coverage.2010_06.deletions.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/low_coverage.2010_06.deletions.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/CEU.low_coverage.2010_06.MobileElementInsertions.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/JPTCHB.low_coverage.2010_06.deletions_discovered_in_trios.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/YRI.low_coverage.2010_06.MobileElementInsertions.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/CEU.low_coverage.2010_06.TandemDuplications.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/low_coverage/sv/CEU.low_coverage.2010_06.deletions_discovered_in_trios.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/trio/indels/CEU.trio.2010_06.indel.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/trio/indels/YRI.trio.2010_06.indel.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/trio/indels/CEU.trio.2010_06.indel.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/trio/indels/YRI.trio.2010_06.indel.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/trio/indels/CEU.trio.2010_06.indel.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/trio/indels/YRI.trio.2010_06.indel.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/trio/indels/CEU.trio.2010_06.indel.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/trio/indels/YRI.trio.2010_06.indel.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/trio/sv/CEU.trio.2010_06.MobileElementInsertions.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/trio/sv/trio.2010_06.deletions.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/trio/sv/CEU.trio.2010_06.novelsequences.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/trio/sv/YRI.trio.2010_06.novelsequences.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/trio/sv/YRI.trio.2010_06.MobileElementInsertions.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/trio/sv/CEU.trio.2010_06.TandemDuplications.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/trio/sv/YRI.trio.2010_06.TandemDuplications.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/trio/sv/CEU.trio.2010_06.MobileElementInsertions.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/trio/sv/trio.2010_06.deletions.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/trio/sv/CEU.trio.2010_06.novelsequences.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/trio/sv/YRI.trio.2010_06.novelsequences.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/trio/sv/YRI.trio.2010_06.MobileElementInsertions.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/trio/sv/CEU.trio.2010_06.TandemDuplications.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/trio/sv/YRI.trio.2010_06.TandemDuplications.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/trio/snps/CEU.trio.2010_03.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/trio/snps/trio.2010_06.ychr.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/trio/snps/trio.2010_06.ychr.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/trio/snps/CEU.trio.2010_03.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/trio/snps/YRI.trio.2010_03.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/trio/snps/YRI.trio.2010_03.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/trio/snps/CEU.trio.2010_03.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/trio/snps/trio.2010_06.ychr.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/trio/snps/trio.2010_06.ychr.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/trio/snps/CEU.trio.2010_03.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/trio/snps/YRI.trio.2010_03.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/trio/snps/YRI.trio.2010_03.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/JPT.exon.2010_06.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/CEU.exon.2010_06.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/CHB.exon.2010_06.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/JPT.exon.2010_06.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/YRI.exon.2010_06.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/CHD.exon.2010_06.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/JPT.exon.2010_06.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/CEU.exon.2010_06.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/CHB.exon.2010_06.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/JPT.exon.2010_06.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/YRI.exon.2010_06.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/CHD.exon.2010_06.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/CHD.exon.2010_06.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/TSI.exon.2010_06.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/YRI.exon.2010_06.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/CHB.exon.2010_06.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/TSI.exon.2010_06.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/CEU.exon.2010_06.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/CHD.exon.2010_06.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/TSI.exon.2010_06.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/YRI.exon.2010_06.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/CHB.exon.2010_06.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/TSI.exon.2010_06.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/indel/CEU.exon.2010_06.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/TSI.exon.2010_03.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/CEU.exon.2010_03.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/LWK.exon.2010_03.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/YRI.exon.2010_03.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/JPT.exon.2010_03.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/CHD.exon.2010_03.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/YRI.exon.2010_03.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/CEU.exon.2010_03.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/CHB.exon.2010_03.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/CHB.exon.2010_03.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/JPT.exon.2010_03.sites.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/TSI.exon.2010_03.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/TSI.exon.2010_03.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/CEU.exon.2010_03.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/LWK.exon.2010_03.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/YRI.exon.2010_03.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/JPT.exon.2010_03.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/CHD.exon.2010_03.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/YRI.exon.2010_03.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/CEU.exon.2010_03.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/CHB.exon.2010_03.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/CHB.exon.2010_03.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/JPT.exon.2010_03.sites.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/TSI.exon.2010_03.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/LWK.exon.2010_03.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/CHD.exon.2010_03.genotypes.vcf.gz.tbi pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/LWK.exon.2010_03.genotypes.vcf.gz pilot_data/technical/working/20100618_pilot_paper_data/exon/snps/CHD.exon.2010_03.genotypes.vcf.gz