technical/working/20130723_phase3_wg/cornell/ALL.ChrY.Cornell.20130502.SNPs.Sites.vcf.gz technical/working/20130718_phase3_samples_cortex_graphs/phase.all_pops.ctx technical/working/20130723_phase3_wg/cornell/ALL.ChrY.Cornell.20130502.SNPs.Sites.vcf.gz.tbi technical/working/20130723_phase3_wg/cornell/ALL.ChrY.Cornell.20130502.SNPs.Genotypes.vcf.gz.tbi technical/working/20131119_integration_test_4_erik/sanger_complete_chunks.tar.gz technical/working/20130723_phase3_wg/cornell/ALL.ChrY.Cornell.20130502.SNPs.Genotypes.vcf.gz technical/working/20130723_phase3_wg/cornell/1000Y.Cornell.SNP.Calls.20131213.pdf data/150140/sequence_read/SRR642631_1.filt.fastq.gz data/NA19150/sequence_read/SRR816289_1.filt.fastq.gz data/150140/sequence_read/SRR642634_2.filt.fastq.gz data/HG00104/sequence_read/SRR816276_2.filt.fastq.gz data/HG01274/sequence_read/SRR816285_2.filt.fastq.gz data/150189/sequence_read/SRR642644_1.filt.fastq.gz data/HG00104/sequence_read/SRR816277_2.filt.fastq.gz data/NA19044/sequence_read/SRR816288_1.filt.fastq.gz data/150140/sequence_read/SRR642633_1.filt.fastq.gz data/NA18955/sequence_read/SRR816281_2.filt.fastq.gz data/NA19044/sequence_read/SRR816288.filt.fastq.gz data/HG01509/sequence_read/ERR271650.filt.fastq.gz data/HG00104/sequence_read/SRR816277_1.filt.fastq.gz data/NA18527/sequence_read/SRR816287_2.filt.fastq.gz data/150140/sequence_read/SRR642635_2.filt.fastq.gz data/HG01274/sequence_read/SRR816285_1.filt.fastq.gz data/150140/sequence_read/SRR642629.filt.fastq.gz data/150140/sequence_read/SRR642626_2.filt.fastq.gz data/150189/sequence_read/SRR642646_1.filt.fastq.gz data/NA18527/sequence_read/SRR816287.filt.fastq.gz data/150140/sequence_read/SRR642627_1.filt.fastq.gz data/HG00270/sequence_read/SRR816279_2.filt.fastq.gz data/HG01278/sequence_read/SRR816286.filt.fastq.gz data/150140/sequence_read/SRR642626_1.filt.fastq.gz data/150140/sequence_read/SRR642635.filt.fastq.gz data/NA19737/sequence_read/SRR816284_1.filt.fastq.gz data/NA19371/sequence_read/SRR816282_2.filt.fastq.gz data/150140/sequence_read/SRR642629_1.filt.fastq.gz data/HG00270/sequence_read/SRR816278_1.filt.fastq.gz data/150140/sequence_read/SRR642626.filt.fastq.gz data/HG01274/sequence_read/SRR816285.filt.fastq.gz data/150140/sequence_read/SRR642633_2.filt.fastq.gz data/150189/sequence_read/SRR642647_1.filt.fastq.gz data/150189/sequence_read/SRR642644_2.filt.fastq.gz data/150140/sequence_read/SRR642631.filt.fastq.gz data/150189/sequence_read/SRR642644.filt.fastq.gz data/NA18955/sequence_read/SRR816280_2.filt.fastq.gz data/150140/sequence_read/SRR642634_1.filt.fastq.gz data/HG01509/sequence_read/ERR271650_1.filt.fastq.gz data/HG00270/sequence_read/SRR816278_2.filt.fastq.gz data/NA18955/sequence_read/SRR816280.filt.fastq.gz data/150140/sequence_read/SRR642629_2.filt.fastq.gz data/NA19371/sequence_read/SRR816282.filt.fastq.gz data/NA19044/sequence_read/SRR816288_2.filt.fastq.gz data/150140/sequence_read/SRR642635_1.filt.fastq.gz data/150140/sequence_read/SRR642634.filt.fastq.gz data/NA19371/sequence_read/SRR816282_1.filt.fastq.gz data/HG00270/sequence_read/SRR816279.filt.fastq.gz data/NA19371/sequence_read/SRR816283.filt.fastq.gz data/NA18955/sequence_read/SRR816281.filt.fastq.gz data/150189/sequence_read/SRR642647_2.filt.fastq.gz data/150189/sequence_read/SRR642645_2.filt.fastq.gz data/NA19371/sequence_read/SRR816283_1.filt.fastq.gz data/NA18955/sequence_read/SRR816280_1.filt.fastq.gz data/150140/sequence_read/SRR642633.filt.fastq.gz data/NA19150/sequence_read/SRR816289_2.filt.fastq.gz data/150189/sequence_read/SRR642645_1.filt.fastq.gz data/HG01278/sequence_read/SRR816286_2.filt.fastq.gz data/HG00104/sequence_read/SRR816276_1.filt.fastq.gz data/150140/sequence_read/SRR642627_2.filt.fastq.gz data/NA19737/sequence_read/SRR816284_2.filt.fastq.gz data/150189/sequence_read/SRR642645.filt.fastq.gz data/150140/sequence_read/SRR642631_2.filt.fastq.gz data/150189/sequence_read/SRR642646.filt.fastq.gz data/HG01278/sequence_read/SRR816286_1.filt.fastq.gz data/150189/sequence_read/SRR642647.filt.fastq.gz data/150189/sequence_read/SRR642646_2.filt.fastq.gz data/150140/sequence_read/SRR642627.filt.fastq.gz data/NA19737/sequence_read/SRR816284.filt.fastq.gz data/NA19371/sequence_read/SRR816283_2.filt.fastq.gz data/HG00270/sequence_read/SRR816279_1.filt.fastq.gz data/HG00104/sequence_read/SRR816277.filt.fastq.gz data/HG00270/sequence_read/SRR816278.filt.fastq.gz data/HG00104/sequence_read/SRR816276.filt.fastq.gz data/HG01509/sequence_read/ERR271650_2.filt.fastq.gz data/NA18527/sequence_read/SRR816287_1.filt.fastq.gz data/NA19150/sequence_read/SRR816289.filt.fastq.gz data/NA18955/sequence_read/SRR816281_1.filt.fastq.gz